BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008491
(564 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224122352|ref|XP_002330602.1| predicted protein [Populus trichocarpa]
gi|222872160|gb|EEF09291.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/591 (66%), Positives = 466/591 (78%), Gaps = 28/591 (4%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MANYSQAHICQCL+R++ ++ SVVTI+GNR TG QFV DVL+LA GLL++GL +GDIV
Sbjct: 1 MANYSQAHICQCLTRLSTLRSTSVVTISGNRQKTGHQFVGDVLSLAHGLLQLGLGNGDIV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AI NS+WYLEW+LAVAF+GGIVAPLNYRWSF+EA A+ +RPVML+TDES WY E
Sbjct: 61 AICGFNSDWYLEWLLAVAFVGGIVAPLNYRWSFEEAKSAMLMVRPVMLITDESCKHWYQE 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
LQ A+PS++WHV GS SS FV ++LT + L+ + + + +SWAPEGAVIICFTS
Sbjct: 121 LQSNALPSVKWHVFSGSPSSGFVKTSNVLTTETLRKHVIGTKQLDYSWAPEGAVIICFTS 180
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD--------------------------- 213
GTTG PKGV++SHSA+IVQSLAK+A VGY EDD
Sbjct: 181 GTTGRPKGVIVSHSAMIVQSLAKVAAVGYSEDDFLIIWRIVALVARNDCWLDSLFLGLLQ 240
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
VYLHTAPLCHIGGLSSA+ MLMVG CHV IPKFE+ A+EA++QHCVTSLITVPA+MADL
Sbjct: 241 VYLHTAPLCHIGGLSSAITMLMVGGCHVLIPKFEASLAIEAIKQHCVTSLITVPAMMADL 300
Query: 274 ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
+L R+K+TWKGR VKK+LNGGG L +ELMK+AT FP+AKL+SAYGMTET SSLTFMT
Sbjct: 301 ISLTRLKETWKGRQYVKKLLNGGGSLSAELMKDATELFPRAKLLSAYGMTETCSSLTFMT 360
Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAH 393
L+DPTL+TP Q Q +S HQP GVCVGKP PHVELK+ +D S +GRILTRG H
Sbjct: 361 LHDPTLQTPAQTLQTVDKTKSSSAHQPHGVCVGKPPPHVELKISADEPSTIGRILTRGPH 420
Query: 394 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 453
+MLRYWDQ K + ST + WLDTGDIGSIDD GNVWLVGR+N +IKSGGEN+YPEEVEA
Sbjct: 421 LMLRYWDQNPMKATESTNDFWLDTGDIGSIDDCGNVWLVGRQNAQIKSGGENIYPEEVEA 480
Query: 454 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 513
+LLQHPG+I VVVG+ ARLTEMVVAC++LR+SWQW+ +NC QS++N L L EVLR
Sbjct: 481 MLLQHPGVIATVVVGVPEARLTEMVVACIKLRQSWQWTNNNCKQSAENN-LTLCREVLRD 539
Query: 514 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
+CREK LTGFK P+LF+LWRKPFPLT+TGKIRRD+VRREVMSHL+ PSNL
Sbjct: 540 YCREKKLTGFKVPKLFILWRKPFPLTTTGKIRRDQVRREVMSHLQFFPSNL 590
>gi|225444051|ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal isoform 1 [Vitis vinifera]
gi|297740839|emb|CBI31021.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 787 bits (2033), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/566 (68%), Positives = 466/566 (82%), Gaps = 3/566 (0%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MA YS+AHIC CLSR+A ++ +S VTI+GNR NTG QFV VL+LA+GLL++G+RSGD+V
Sbjct: 1 MAFYSRAHICHCLSRLATLRIHSAVTISGNRRNTGHQFVDGVLSLAQGLLDLGIRSGDVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AISALNS+ YLE LAVAF+GG+VAPLNYRWSF+EA A+ ++PVML+TD S WY +
Sbjct: 61 AISALNSDRYLECFLAVAFVGGVVAPLNYRWSFEEARFAMEMVKPVMLITDSSCSYWYPK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVN--KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
L++ +PSLRWHV + S SD V+ LT ++LK +L+SL F ++WAPEGAV+ICF
Sbjct: 121 LENDHLPSLRWHVFM-DSLSDVVSIVLFSALTTEMLKKPALKSLSFNYAWAPEGAVLICF 179
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGA 238
TSGTTG PKGV ISHSALI+QSLAKIAIVGY EDDVYLHTAPLCHIGGLSSA+ MLMVG
Sbjct: 180 TSGTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGGLSSALTMLMVGG 239
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
CH+FIPKF++K ALEA++QH VTSLITVPAIM DL ++IR+K TWK +SVKKILNGGGG
Sbjct: 240 CHIFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIIRMKMTWKVTESVKKILNGGGG 299
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
L + L+++A FP+AK++SAYGMTET SSLTFMTLYDPT + Q Q F + +S H
Sbjct: 300 LSNGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQEFVEIKSSSFH 359
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ ++PS S E WLDTG
Sbjct: 360 LPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDEGWLDTG 419
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIGSIDD GN+WL+GR N RIKSGGENVYPEEVE VL QHPG+ G VVVG+ + RLTEMV
Sbjct: 420 DIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDVRLTEMV 479
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
VAC+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTGFK P+LF LWRKPFPL
Sbjct: 480 VACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFTLWRKPFPL 539
Query: 539 TSTGKIRRDEVRREVMSHLKSLPSNL 564
TSTGK+RR +V+REV+SHL SLPSNL
Sbjct: 540 TSTGKLRRYQVQREVLSHLHSLPSNL 565
>gi|356555885|ref|XP_003546260.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like isoform 1 [Glycine max]
Length = 560
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/564 (64%), Positives = 450/564 (79%), Gaps = 4/564 (0%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MANYS HICQCLS + ++++ V I GNR TGQ+ V++VL+LA+GLL +GL SG +V
Sbjct: 1 MANYSHPHICQCLSHLLTLRQHFPVIIAGNRRKTGQELVEEVLSLAQGLLHLGLTSGQVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AISA NS+ YLEW+LA+AF+GGI APLNYRWSF+EA A+ +++PV+LV DESS +WY +
Sbjct: 61 AISAFNSDRYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMAAVKPVLLVIDESSYTWYSK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
LQ +PSL+WH+ L S SSDF +K ++LT ++LK + ++ LPF +SWAP+GAVIICFTS
Sbjct: 121 LQQNDVPSLKWHILLDSPSSDF-SKWNVLTPEMLKRHPIKLLPFDYSWAPDGAVIICFTS 179
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV +SH AL +QSLAKIAIVGY DDVYLHTAPLCHIGGLSSAM MLMVG CH
Sbjct: 180 GTTGKPKGVTLSHGALTIQSLAKIAIVGYNVDDVYLHTAPLCHIGGLSSAMTMLMVGGCH 239
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
V +PKF+++SA++A+EQH VTS ITVPAIMA L ++IR K+TWKG ++VKKILNGGG L
Sbjct: 240 VLMPKFDAESAVDAIEQHAVTSFITVPAIMASLISIIRHKETWKGGETVKKILNGGGSLS 299
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
EL+K+ + F KAKLISAYGMTET SSLTF+TLYDP ET Q QAFG +HQ
Sbjct: 300 HELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYDPMHETTNQSLQAFGVAGSKLIHQQ 359
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
QGVC+GK APH+ELK+ +D S H GRILTRG H+MLRYWDQ L P WLDTGDI
Sbjct: 360 QGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLRYWDQTLTNPLNPNKRAWLDTGDI 419
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
GSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI +VVVGI +A LTEMV A
Sbjct: 420 GSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPDAHLTEMVAA 479
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
C++LRE+WQWSE S+ N+E LLS + ++Q+C E +L+ FK P++F++WRKPFPLT+
Sbjct: 480 CIQLRENWQWSE---QLSASNEEFLLSRKNIQQYCIENHLSRFKIPKMFIVWRKPFPLTT 536
Query: 541 TGKIRRDEVRREVMSHLKSLPSNL 564
GKI+RD+VR+EVMS L+SL SNL
Sbjct: 537 IGKIKRDQVRKEVMSQLQSLHSNL 560
>gi|356533059|ref|XP_003535086.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Glycine max]
Length = 560
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/564 (65%), Positives = 447/564 (79%), Gaps = 4/564 (0%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MANYS +HICQCLS + +R+ V I RH TGQ+ ++VL+LA+GLL +GL G +V
Sbjct: 1 MANYSHSHICQCLSGLLNFRRHFSVIIAEKRHKTGQELAEEVLSLAQGLLHLGLTPGQVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AISA NSE YLEW+LA+AF+GGI APLNYRWSF+EA AI ++ P+MLVTDESS + Y +
Sbjct: 61 AISAYNSERYLEWLLAIAFVGGIAAPLNYRWSFEEARLAINAVNPLMLVTDESSYARYSK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
LQ +PSL+WH+ L S SSDF K ++LTA++LK + ++ LPF +SWAPEGAVIICFTS
Sbjct: 121 LQQNDVPSLKWHILLDSPSSDFT-KWNVLTAEMLKRHPVKLLPFDYSWAPEGAVIICFTS 179
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV +SH ALI+QSLAKIAIVGY EDDVYLHTAPL HIGGLSSAM MLMVG CH
Sbjct: 180 GTTGKPKGVTLSHGALIIQSLAKIAIVGYNEDDVYLHTAPLFHIGGLSSAMTMLMVGGCH 239
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
V +PKF+++SA++A+EQ+ VTS ITVPAIMA L ++IR K+TW+G D+VKKILNGGG L
Sbjct: 240 VLMPKFDAESAVDAIEQYAVTSFITVPAIMASLISIIRHKETWQGGDTVKKILNGGGSLS 299
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
EL+K+ + F KAKLISAYGMTET SSLTF+TLY+P ET Q QAFG +HQ
Sbjct: 300 HELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYEPMHETTSQSLQAFGVAGSKLIHQQ 359
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
QGVCVGK APH+ELK+ +D S H+GRILTRG H+MLRYWDQ L P E WLDTGDI
Sbjct: 360 QGVCVGKAAPHIELKISADASGHIGRILTRGPHIMLRYWDQTLTNPLNPNNEAWLDTGDI 419
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
GSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI +VVVGI +A LTEMV A
Sbjct: 420 GSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPDAHLTEMVAA 479
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
C++LRE+WQWSE S+ N+E LLS + L Q+C E +L+ FK P+ F++WRKPF LT+
Sbjct: 480 CIQLRENWQWSE---QLSASNEEFLLSRKNLYQYCLENHLSRFKIPKTFIVWRKPFQLTT 536
Query: 541 TGKIRRDEVRREVMSHLKSLPSNL 564
TGKIRRD+VR+EVMS L+SL SNL
Sbjct: 537 TGKIRRDQVRKEVMSQLQSLHSNL 560
>gi|359483953|ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal isoform 2 [Vitis vinifera]
Length = 545
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/572 (64%), Positives = 446/572 (77%), Gaps = 35/572 (6%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MA YS+AHIC CLSR+A ++ +S VTI+GNR NTG QFV VL+LA+GLL++G+RSGD+V
Sbjct: 1 MAFYSRAHICHCLSRLATLRIHSAVTISGNRRNTGHQFVDGVLSLAQGLLDLGIRSGDVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AISALNS+ YLE LAVAF+GG+VAPLNYRWSF+EA A+ ++PVML+TD S WY +
Sbjct: 61 AISALNSDRYLECFLAVAFVGGVVAPLNYRWSFEEARFAMEMVKPVMLITDSSCSYWYPK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
L++ +PSLRWHV + S S + ++ LT ++LK +L+SL F ++WAPEGAV+ICFTS
Sbjct: 121 LENDHLPSLRWHVFMDSLSE--FSSKETLTTEMLKKPALKSLSFNYAWAPEGAVLICFTS 178
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV ISHSALI+QSLAKIAIVGY EDDVYLHTAPLCHIGGLSSA+ MLMVG CH
Sbjct: 179 GTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGGLSSALTMLMVGGCH 238
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI--------RVKKTWKGRDSVKKI 292
+FIPKF++K ALEA++QH VTSLITVPAIM DL ++I R+K TWK +SVKKI
Sbjct: 239 IFIPKFDAKLALEAIKQHHVTSLITVPAIMVDLVSIISSGLESFVRMKMTWKVTESVKKI 298
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
LNGG MTET SSLTFMTLYDPT + Q Q F +
Sbjct: 299 LNGG-------------------------MTETCSSLTFMTLYDPTCASSRQALQEFVEI 333
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
+S H P+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ ++PS S E
Sbjct: 334 KSSSFHLPEGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDE 393
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WLDTGDIGSIDD GN+WL+GR N RIKSGGENVYPEEVE VL QHPG+ G VVVG+ +
Sbjct: 394 GWLDTGDIGSIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDV 453
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
RLTEMVVAC+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTGFK P+LF LW
Sbjct: 454 RLTEMVVACIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFTLW 513
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
RKPFPLTSTGK+RR +V+REV+SHL SLPSNL
Sbjct: 514 RKPFPLTSTGKLRRYQVQREVLSHLHSLPSNL 545
>gi|255575310|ref|XP_002528558.1| AMP dependent CoA ligase, putative [Ricinus communis]
gi|223532002|gb|EEF33813.1| AMP dependent CoA ligase, putative [Ricinus communis]
Length = 551
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/577 (62%), Positives = 440/577 (76%), Gaps = 39/577 (6%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
M+NYSQAHICQCL+R++ ++ NS+VTITGNR TG+QFV++VL+LA GL ++GLR GDIV
Sbjct: 1 MSNYSQAHICQCLTRLSTLRPNSIVTITGNRQTTGKQFVENVLSLAGGLTKLGLRKGDIV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AI A NS+ YLEW+LAVAFIGGIVAPLNYRWSF+EA A+ S++ VM V DES WY E
Sbjct: 61 AICAFNSDLYLEWLLAVAFIGGIVAPLNYRWSFEEAKSAMLSVKAVMFVADESCSFWYSE 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
L+ +IPSL WHV L SSS + ++LT D L+ + S +SWAPE AV+ICFTS
Sbjct: 121 LKINSIPSLMWHVFLDFSSSSVIQASNILTTDTLRKQGIGSPELNYSWAPERAVLICFTS 180
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV+ISHSAL VQSLAK+A VGY EDDVYLHTAPLCHIGGLSSAMAMLMVGACH
Sbjct: 181 GTTGRPKGVLISHSALTVQSLAKVAFVGYCEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL-------------IRVKKTWKGRD 287
VFIPKF + A++ ++QH VTSLITVPA M DL +L +R K+TWKGR
Sbjct: 241 VFIPKFNASLAVDVIDQHNVTSLITVPATMGDLISLTSQLAQFIFQRNFVREKETWKGRH 300
Query: 288 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 347
++KK+LNG GMTE+ SSLTFMTLYDPTLETP QL Q
Sbjct: 301 TLKKMLNG-------------------------GMTESCSSLTFMTLYDPTLETPDQLLQ 335
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 407
+G SV+QPQGVCVGKPAPHVE+K+C DGSSH GRILTRG H MLRYWDQ ++ S
Sbjct: 336 TYGRTKLTSVNQPQGVCVGKPAPHVEIKICPDGSSHSGRILTRGPHAMLRYWDQTPSEAS 395
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
T E+WLDTGDIG ID GN+WL+GR N RIKSGGENV+PEEVEA+LLQHPG+ +V+
Sbjct: 396 DRTNEIWLDTGDIGIIDGSGNLWLIGRANNRIKSGGENVHPEEVEAILLQHPGVAAAIVL 455
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
GI +ARL EMVVAC+RLRE W+WS +C + KE+LL SE+L+++CREKNL+ FK P+
Sbjct: 456 GIPDARLMEMVVACIRLREGWRWSNDDC-KPLAGKEILLCSEILQKYCREKNLSRFKVPK 514
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
+F++WRKPFPLT++GKIRRD++R EV SHL+ LPS+L
Sbjct: 515 IFIIWRKPFPLTTSGKIRRDQIRGEVTSHLQFLPSSL 551
>gi|357448509|ref|XP_003594530.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355483578|gb|AES64781.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 562
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/567 (62%), Positives = 439/567 (77%), Gaps = 15/567 (2%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
AHICQCLSR+ +R+ VTI GN TGQ+ V++V++LA GLL++G+ GD+VAISA N
Sbjct: 2 AHICQCLSRLLTFRRDFPVTIAGNNRKTGQELVEEVVSLAHGLLQLGVTPGDVVAISAYN 61
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
S+ YLEW+LA+AF+GGI APLNYRWSF+EA A+ +++PVMLV DES SWY + Q +
Sbjct: 62 SDLYLEWLLAIAFVGGIAAPLNYRWSFEEAKLAMKAVKPVMLVIDESCYSWYFKFQQNDV 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
P L+WHV L S SSDF NK ++LT ILK + ++ L F +SWAPEGAVIICFTSGTTG P
Sbjct: 122 PFLKWHVLLDSPSSDFTNKWNVLTPGILKRHHVKPLEFNYSWAPEGAVIICFTSGTTGKP 181
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV ISH ALI+QSLAKIAIVGY EDDVYLHTAPLCHIGGLSSAMAMLMVG CHVF+PKF
Sbjct: 182 KGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMAMLMVGGCHVFMPKF 241
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+++ A+ +E++ VTSLITVPAIM L +++R K+TWKG ++VKKILNGGG L EL+K+
Sbjct: 242 DAELAVGDIERYNVTSLITVPAIMTSLISIVRRKETWKGGETVKKILNGGGSLSFELIKD 301
Query: 307 ATNSFPKAKLISAYG--------MTETSSSLTFMTLYDPTLETPGQLPQAFG-NVTPNSV 357
F KAKLISAYG MTE SSLTF+TLYDP +T Q +G + + +
Sbjct: 302 THIFFHKAKLISAYGRSFLTQCWMTEACSSLTFLTLYDPMQKTISHPFQTYGEEESKHLI 361
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
HQPQGVCVGK APHVELK+C DG + GRILTRG H+MLRYWDQ L S EVW DT
Sbjct: 362 HQPQGVCVGKAAPHVELKICKDGDT--GRILTRGPHLMLRYWDQTLTNTSNQRSEVWFDT 419
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GDIG +D GN+WL+GR NGRIKSGGEN+YPEEVEA+LL+HPGI +V+VGI +AR TEM
Sbjct: 420 GDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLEHPGIARVVIVGIPDARFTEM 479
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V AC++ RE+WQW E S+ N+E LS + L+Q+C E NL+ FK P++F+ WRKPFP
Sbjct: 480 VAACIQPRENWQWLE----HSTSNEEFHLSRKNLQQYCLENNLSRFKIPKIFIEWRKPFP 535
Query: 538 LTSTGKIRRDEVRREVMSHLKSLPSNL 564
LT+TGKIRRD+VR+EV+S ++SL SNL
Sbjct: 536 LTTTGKIRRDQVRKEVLSEIQSLHSNL 562
>gi|356555887|ref|XP_003546261.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like isoform 2 [Glycine max]
Length = 544
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/573 (60%), Positives = 432/573 (75%), Gaps = 38/573 (6%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MANYS HICQCLS + ++++ V I GNR TGQ+ V++VL+LA+GLL +GL SG +V
Sbjct: 1 MANYSHPHICQCLSHLLTLRQHFPVIIAGNRRKTGQELVEEVLSLAQGLLHLGLTSGQVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AISA NS+ YLEW+LA+AF+GGI APLNYRWSF+EA A+ +++PV+LV DESS +WY +
Sbjct: 61 AISAFNSDRYLEWLLAIAFVGGIAAPLNYRWSFEEARLAMAAVKPVLLVIDESSYTWYSK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
LQ +PSL+WH+ L S SSDF +K ++LT ++LK + ++ LPF +SWAP+GAVIICFTS
Sbjct: 121 LQQNDVPSLKWHILLDSPSSDF-SKWNVLTPEMLKRHPIKLLPFDYSWAPDGAVIICFTS 179
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV +SH AL +QSLAKIAIVGY DDVYLHTAPLCHIGGLSSAM MLMVG CH
Sbjct: 180 GTTGKPKGVTLSHGALTIQSLAKIAIVGYNVDDVYLHTAPLCHIGGLSSAMTMLMVGGCH 239
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV---------KKTWKGRDSVKK 291
V +PKF+++SA++A+EQH VTS ITVPAIMA L ++IR K+TWKG ++VKK
Sbjct: 240 VLMPKFDAESAVDAIEQHAVTSFITVPAIMASLISIIRYIPVFNIFRHKETWKGGETVKK 299
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
ILNGG MTET SSLTF+TLYDP ET Q QAFG
Sbjct: 300 ILNGG-------------------------MTETCSSLTFLTLYDPMHETTNQSLQAFGV 334
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
+HQ QGVC+GK APH+ELK+ +D S H GRILTRG H+MLRYWDQ L P
Sbjct: 335 AGSKLIHQQQGVCIGKAAPHIELKISADASGHTGRILTRGPHIMLRYWDQTLTNPLNPNK 394
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
WLDTGDIGSID GN+WL+GR NGRIKSGGEN+YPEEVEA+L QHPGI +VVVGI +
Sbjct: 395 RAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPD 454
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
A LTEMV AC++LRE+WQWSE S+ N+E LLS + ++Q+C E +L+ FK P++F++
Sbjct: 455 AHLTEMVAACIQLRENWQWSE---QLSASNEEFLLSRKNIQQYCIENHLSRFKIPKMFIV 511
Query: 532 WRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
WRKPFPLT+ GKI+RD+VR+EVMS L+SL SNL
Sbjct: 512 WRKPFPLTTIGKIKRDQVRKEVMSQLQSLHSNL 544
>gi|147837153|emb|CAN63633.1| hypothetical protein VITISV_009387 [Vitis vinifera]
Length = 520
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/522 (67%), Positives = 427/522 (81%), Gaps = 2/522 (0%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MA YS+AHIC CLSR+A ++ +S VTI+GNR NTG QFV VL+LA+GLL++G+RSG +V
Sbjct: 1 MAFYSRAHICHCLSRLATLRIHSAVTISGNRRNTGHQFVDGVLSLAQGLLDLGVRSGHVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
AISALNS+ YLE LAVAF+GG+VAPLNYRWSF+EA A+ ++PVML+TD S WY +
Sbjct: 61 AISALNSDRYLECFLAVAFVGGVVAPLNYRWSFEEARFAMEMVKPVMLITDSSCSYWYPK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
L++ +PSLRWHV + S S N ++ LT ++LK +L+SL F ++WAPEGAV+ICFTS
Sbjct: 121 LENDHLPSLRWHVFMDSLSE--FNSKETLTTEMLKKPALKSLSFNYAWAPEGAVLICFTS 178
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV ISHSALI+QSLAKIAIVGY EDDVYLHTAPLCHIGGLSSA+ MLMVG CH
Sbjct: 179 GTTGRPKGVTISHSALIIQSLAKIAIVGYDEDDVYLHTAPLCHIGGLSSALTMLMVGGCH 238
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+FIPKF++K ALEA++QH VTSLITVPAIMADL ++IR+K TWK +SVKKILNGGGGL
Sbjct: 239 IFIPKFDAKLALEAIKQHHVTSLITVPAIMADLVSIIRMKMTWKVTESVKKILNGGGGLS 298
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+ L+++A FP+AK++SAYGMTET SSLTFMTLYDPT + Q Q F + +S H P
Sbjct: 299 NGLIEDAIKFFPRAKILSAYGMTETCSSLTFMTLYDPTCASSRQALQEFVEIKSSSFHLP 358
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+GVCVGKPAPHVELK+C D S HVGRILTRG H+MLRYWDQ ++PS S E WLDTGDI
Sbjct: 359 EGVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDEGWLDTGDI 418
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
GSIDD GN+WL+GR N IKSGGENVYPEEVE VL QHPG+ G VVVG+ + RLTEMVVA
Sbjct: 419 GSIDDYGNIWLIGRTNNXIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDVRLTEMVVA 478
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
C+R++++WQW++++ ++ KEL+LSSE LR HCREKNLTG
Sbjct: 479 CIRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTG 520
>gi|449433565|ref|XP_004134568.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Cucumis sativus]
Length = 564
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/564 (62%), Positives = 432/564 (76%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
M NYS HICQCL+RIA R S +T+ NR TGQQFV V LARGLL++GL GD+V
Sbjct: 1 MTNYSLPHICQCLTRIATAPRPSPLTLAANRPQTGQQFVNSVFALARGLLDLGLLPGDVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
ISA NS+WYLEW+LAVAF+G I APLNYRWSF+EA A+ +++PVMLV DE WY +
Sbjct: 61 VISAFNSDWYLEWLLAVAFVGAIAAPLNYRWSFEEALSAMVAVQPVMLVIDEGGCQWYSK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
LQ+ IPSLRWHV +GS + R LT++ LK + + ++P APEG +ICFTS
Sbjct: 121 LQNNHIPSLRWHVFIGSHLPGYDKTRGALTSEELKKHYVINMPPNFLHAPEGVALICFTS 180
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV I+HSALIVQ+LAK+AIVGY EDDVYLHTAPLCHIGGLSSA+AMLM+GA H
Sbjct: 181 GTTGRPKGVAITHSALIVQTLAKVAIVGYSEDDVYLHTAPLCHIGGLSSAIAMLMLGARH 240
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+ IPKFE KSA+EA++ + VTSLITVPA+MADL +LIR + K R+SVKKILNGGGGLP
Sbjct: 241 ILIPKFEVKSAVEAIDLYGVTSLITVPAMMADLVSLIRERDNGKTRESVKKILNGGGGLP 300
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
EL+K+A FP+AKL+SAYGMTET SSLTF+ L DP ET Q++ + SV+QP
Sbjct: 301 LELIKDAVGIFPRAKLVSAYGMTETCSSLTFLMLCDPMGETSVPHFQSYEHSKCRSVYQP 360
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+GVCVGKPAPH+E+K+ DGSS+VGRILTRG H+MLRY+D+ A+PS +VW DTGDI
Sbjct: 361 EGVCVGKPAPHIEIKISLDGSSNVGRILTRGPHLMLRYYDKISARPSNDANDVWFDTGDI 420
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
GSIDD GN+WLVGR NGRIKSGGEN+YPEEVE +LLQHPG+ VV+GI ++RLTE VA
Sbjct: 421 GSIDDNGNLWLVGRSNGRIKSGGENIYPEEVERILLQHPGVKRCVVIGIPDSRLTEKTVA 480
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
CV+L E WQW E+N + + LSS +LR+HC + NLTGFK P+ F+ W KPFP+TS
Sbjct: 481 CVQLEEDWQWYETNHELLRGKIKQHLSSAILREHCMKCNLTGFKVPKEFIKWGKPFPVTS 540
Query: 541 TGKIRRDEVRREVMSHLKSLPSNL 564
GK +RD +R EV+SHL+ L S L
Sbjct: 541 MGKFKRDAIRNEVISHLRLLRSTL 564
>gi|449511136|ref|XP_004163873.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Cucumis sativus]
Length = 572
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/572 (61%), Positives = 434/572 (75%), Gaps = 8/572 (1%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
M NYS HICQCL+RIA R S +T+ NR TGQQFV V LARGLL++GL GD+V
Sbjct: 1 MTNYSLPHICQCLTRIATAPRPSPLTLAANRPQTGQQFVHSVFALARGLLDLGLLPGDVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
ISA NS+WYLEW+LAVAF+G I APLNYRWSF+EA A+ +++PVMLV DE WY +
Sbjct: 61 VISAFNSDWYLEWLLAVAFVGAIAAPLNYRWSFEEALSAMVAVQPVMLVIDEGGCQWYSK 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
LQ+ IPSLRWHV +GS + R LT++ LK + + ++P APEG +ICFTS
Sbjct: 121 LQNNHIPSLRWHVFIGSHLPGYDKTRGALTSEELKKHYVINMPPNFLHAPEGVALICFTS 180
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV I+HSALIVQ+LAK+AIVGY EDDVYLHTAPLCHIGGLSSA+AMLM+GA H
Sbjct: 181 GTTGRPKGVAITHSALIVQTLAKVAIVGYSEDDVYLHTAPLCHIGGLSSAIAMLMLGARH 240
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+ IPKFE KSA+EA++ + VTSLITVPA+MADL +LIR + K R+SVKKILNGGGGLP
Sbjct: 241 ILIPKFEVKSAVEAIDLYGVTSLITVPAMMADLVSLIRERDNGKTRESVKKILNGGGGLP 300
Query: 301 SELMKEATNSFPKAKLISAYG--------MTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
EL+K+A + FP+AKL+SAYG MTET SSLTF+ L DP ET Q++ +
Sbjct: 301 LELIKDAVSIFPRAKLVSAYGSAFVPHCWMTETCSSLTFLMLCDPMGETSVPHFQSYEHS 360
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
SV+QP+GVCVGKPAPH+E+K+ DGSS+VGRILTRG H+MLRY+D+ A+PS +
Sbjct: 361 KCRSVYQPEGVCVGKPAPHIEIKISLDGSSNVGRILTRGPHLMLRYYDKISARPSNDAND 420
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
VW DTGDIGSIDD GN+WLVGR NGRIKSGGEN+YPEEVE +LLQHPG+ VV+GI ++
Sbjct: 421 VWFDTGDIGSIDDNGNLWLVGRSNGRIKSGGENIYPEEVERILLQHPGVKRCVVIGIPDS 480
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
RLTE VACV+L E+WQW E+N + + LSS +LR+HC + NLTGFK P+ F+ W
Sbjct: 481 RLTEKTVACVQLEENWQWYETNHELLRGKIKQHLSSAILREHCMKCNLTGFKVPKEFIKW 540
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
KPFP+TS GK +RD +R EV+SHL+ L S L
Sbjct: 541 GKPFPVTSMGKFKRDAIRNEVISHLRLLRSTL 572
>gi|22329863|ref|NP_174340.2| acyl-activating enzyme 14 [Arabidopsis thaliana]
gi|75304445|sp|Q8VYJ1.1|MENE_ARATH RecName: Full=2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal; AltName: Full=Acyl-activating
enzyme 14; AltName: Full=O-succinylbenzoyl-CoA ligase;
Flags: Precursor
gi|17979487|gb|AAL50080.1| At1g30520/F26G16_3 [Arabidopsis thaliana]
gi|29893264|gb|AAP03026.1| acyl-activating enzyme 14 [Arabidopsis thaliana]
gi|34365547|gb|AAQ65085.1| At1g30520/F26G16_3 [Arabidopsis thaliana]
gi|332193118|gb|AEE31239.1| acyl-activating enzyme 14 [Arabidopsis thaliana]
Length = 560
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/572 (59%), Positives = 433/572 (75%), Gaps = 20/572 (3%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MAN+S+ HICQCL+R+A+VKRN+VVT+ GNR TG++FV VL+LA GL+ +GLR+GD+V
Sbjct: 1 MANHSRPHICQCLTRLASVKRNAVVTVYGNRKRTGREFVDGVLSLAAGLIRLGLRNGDVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
+I+A NS+ +LEW+LAVA +GG+VAPLNYRWS KEA A+ + PV+LVTDE+ SW ++
Sbjct: 61 SIAAFNSDLFLEWLLAVALVGGVVAPLNYRWSLKEAKMAMLLVEPVLLVTDETCVSWCID 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
+Q+ IPSL+W V + S+S+DF N+ LT ++LK +L T++WA + AV+ICFT
Sbjct: 121 VQNGDIPSLKWRVLMESTSTDFANELNQFLTTEMLKQRTLVPSLATYAWASDDAVVICFT 180
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
SGTTG PKGV ISH A I QSLAKIAI GYGEDDVYLHT+PL HIGGLSSAMAMLMVGAC
Sbjct: 181 SGTTGRPKGVTISHLAFITQSLAKIAIAGYGEDDVYLHTSPLVHIGGLSSAMAMLMVGAC 240
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
HV +PKF++K+AL+ +EQ+ +T ITVPA+MADL + R K V+KILNGGG L
Sbjct: 241 HVLLPKFDAKTALQVMEQNHITCFITVPAMMADLIRVNRTTKNGAENRGVRKILNGGGSL 300
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
SEL+KEA N FP A+++SAYGMTE SSLTFMTL+DPT E+ VT ++Q
Sbjct: 301 SSELLKEAVNIFPCARILSAYGMTEACSSLTFMTLHDPTQES--------FKVTYPLLNQ 352
Query: 360 P-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVMLRYWDQFLAKPSVST-----GE 412
P QG CVGKPAPH+EL V D SS VG+ILTRG H MLRYW +A+ +V T E
Sbjct: 353 PKQGTCVGKPAPHIELMVKLDEDSSRVGKILTRGPHTMLRYWGHQVAQENVETSESRSNE 412
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WLDTGDIG+ D+ GN+WL+GR NGRIK+GGENVYPEEVEAVL++HPGI+ VV+G+ +
Sbjct: 413 AWLDTGDIGAFDEFGNLWLIGRSNGRIKTGGENVYPEEVEAVLVEHPGIVSAVVIGVIDT 472
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
RL EMVVACVRL+E W WS D ++ LSSE L+ HCR +NLTGFK P+ FV W
Sbjct: 473 RLGEMVVACVRLQEKWIWS----DVENRKGSFQLSSETLKHHCRTQNLTGFKIPKRFVRW 528
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
K FPLT+TGK++RDEVRR+V+SH + + S+L
Sbjct: 529 EKQFPLTTTGKVKRDEVRRQVLSHFQIMTSSL 560
>gi|6634775|gb|AAF19755.1|AC009917_14 Contains similarity to gi|34845 luciferase YE protein from
Pyrophorus plagiophthalamus, and contains an AMP-binding
PF|00501 domain [Arabidopsis thaliana]
Length = 581
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/593 (57%), Positives = 433/593 (73%), Gaps = 41/593 (6%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MAN+S+ HICQCL+R+A+VKRN+VVT+ GNR TG++FV VL+LA GL+ +GLR+GD+V
Sbjct: 1 MANHSRPHICQCLTRLASVKRNAVVTVYGNRKRTGREFVDGVLSLAAGLIRLGLRNGDVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
+I+A NS+ +LEW+LAVA +GG+VAPLNYRWS KEA A+ + PV+LVTDE+ SW ++
Sbjct: 61 SIAAFNSDLFLEWLLAVALVGGVVAPLNYRWSLKEAKMAMLLVEPVLLVTDETCVSWCID 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
+Q+ IPSL+W V + S+S+DF N+ LT ++LK +L T++WA + AV+ICFT
Sbjct: 121 VQNGDIPSLKWRVLMESTSTDFANELNQFLTTEMLKQRTLVPSLATYAWASDDAVVICFT 180
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD---------------------VYLHT 218
SGTTG PKGV ISH A I QSLAKIAI GYGEDD VYLHT
Sbjct: 181 SGTTGRPKGVTISHLAFITQSLAKIAIAGYGEDDVRFLPPLICLSSMKSIELNTSVYLHT 240
Query: 219 APLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 278
+PL HIGGLSSAMAMLMVGACHV +PKF++K+AL+ +EQ+ +T ITVPA+MADL + R
Sbjct: 241 SPLVHIGGLSSAMAMLMVGACHVLLPKFDAKTALQVMEQNHITCFITVPAMMADLIRVNR 300
Query: 279 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 338
K V+KILNGGG L SEL+KEA N FP A+++SAYGMTE SSLTFMTL+DPT
Sbjct: 301 TTKNGAENRGVRKILNGGGSLSSELLKEAVNIFPCARILSAYGMTEACSSLTFMTLHDPT 360
Query: 339 LETPGQLPQAFGNVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVML 396
E+ VT ++QP QG CVGKPAPH+EL V D SS VG+ILTRG H ML
Sbjct: 361 QES--------FKVTYPLLNQPKQGTCVGKPAPHIELMVKLDEDSSRVGKILTRGPHTML 412
Query: 397 RYWDQFLAKPSVST-----GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
RYW +A+ +V T E WLDTGDIG+ D+ GN+WL+GR NGRIK+GGENVYPEEV
Sbjct: 413 RYWGHQVAQENVETSESRSNEAWLDTGDIGAFDEFGNLWLIGRSNGRIKTGGENVYPEEV 472
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
EAVL++HPGI+ VV+G+ + RL EMVVACVRL+E W WS D ++ LSSE L
Sbjct: 473 EAVLVEHPGIVSAVVIGVIDTRLGEMVVACVRLQEKWIWS----DVENRKGSFQLSSETL 528
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
+ HCR +NLTGFK P+ FV W K FPLT+TGK++RDEVRR+V+SH + + S+L
Sbjct: 529 KHHCRTQNLTGFKIPKRFVRWEKQFPLTTTGKVKRDEVRRQVLSHFQIMTSSL 581
>gi|297845990|ref|XP_002890876.1| hypothetical protein ARALYDRAFT_313692 [Arabidopsis lyrata subsp.
lyrata]
gi|297336718|gb|EFH67135.1| hypothetical protein ARALYDRAFT_313692 [Arabidopsis lyrata subsp.
lyrata]
Length = 581
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/594 (56%), Positives = 434/594 (73%), Gaps = 43/594 (7%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
MAN+S+ HICQCL+++A+VKRN+VVT+ GNR TG++FV VL+LA GL+ GLR+GD+V
Sbjct: 1 MANHSRPHICQCLTQLASVKRNAVVTVYGNRKRTGREFVDGVLSLAAGLIRFGLRNGDVV 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
+++ALN++ +LEW+LAVA +GGIVAPLNYRWS KEA A+ + PV+LVTDE+ SW +
Sbjct: 61 SVAALNTDLFLEWLLAVALVGGIVAPLNYRWSLKEAKMAMLLVEPVLLVTDETCVSWCIH 120
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRD-MLTADILKGYSL-RSLPFTHSWAPEGAVIICF 178
+Q+ IPSL+W V + S+S++ N + LT +++K +L SLP ++WAP+ AV+ICF
Sbjct: 121 VQNGDIPSLKWRVLMESTSTELANDDNQFLTTEMIKQRTLVPSLPM-YAWAPDDAVVICF 179
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD---------------------VYLH 217
TSGTTG PKGV ISH A I QSLAKIAIVGYGEDD VYLH
Sbjct: 180 TSGTTGRPKGVTISHLAFITQSLAKIAIVGYGEDDVRFSPPLICLSSMNSAELNTSVYLH 239
Query: 218 TAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 277
T+PL HIGGLSSAMAMLMVGACHV +PKF++K+AL+ +E + +T ITVPA+MADL +
Sbjct: 240 TSPLVHIGGLSSAMAMLMVGACHVLLPKFDAKTALQVMEHNRITCFITVPAMMADLIRVN 299
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 337
R K V+KILNGGG L ++L++EA FP AK++SAYGMTE SSLTFMTL+DP
Sbjct: 300 RTTKNGAENRCVRKILNGGGSLSTQLLQEAVKIFPCAKILSAYGMTEACSSLTFMTLHDP 359
Query: 338 TLETPGQLPQAFGNVTPNSVHQP-QGVCVGKPAPHVELKVCSD-GSSHVGRILTRGAHVM 395
T E+ VT + V+QP QG CVGKPAPH+EL + D SS VG+ILTRG H M
Sbjct: 360 TQES--------FKVTYSLVNQPKQGTCVGKPAPHIELMIKLDENSSRVGKILTRGPHTM 411
Query: 396 LRYWDQFLAKPSVS-----TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 450
L YW L + +V+ + E WLDTGDIG+ D+ GN+ L+GR NGRIK+GGENVYPEE
Sbjct: 412 LGYWGHQLVQENVASSESRSNEAWLDTGDIGTFDEFGNLCLIGRSNGRIKTGGENVYPEE 471
Query: 451 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 510
VEAVL++HPGI+ VV+G+ +ARL EMVVACVRL E+W WS D ++ + LSSE
Sbjct: 472 VEAVLVEHPGIVSAVVIGVIDARLGEMVVACVRLHENWIWS----DVENRKQSFQLSSET 527
Query: 511 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
L+ HCR +NLTGFK P+ FV W K FPLT+TGK++RDEVRR+VMSH + L S+L
Sbjct: 528 LKHHCRTQNLTGFKIPKRFVRWEKQFPLTTTGKVKRDEVRRQVMSHFQILTSSL 581
>gi|326487970|dbj|BAJ89824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 282/561 (50%), Positives = 378/561 (67%), Gaps = 23/561 (4%)
Query: 5 SQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISA 64
+ HI QCL I A + + V ++G+ G FV V +LA GLLE G+R GD+VA+
Sbjct: 2 ASGHIAQCLGGILARRAGATVAVSGDLRLNGAHFVDGVRSLAAGLLERGVRPGDVVAVVG 61
Query: 65 LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT 124
NS Y+E +LAV +IG IVAPLN+RWSF+EA++A+ +RP + D + SW L L +
Sbjct: 62 FNSIEYMELLLAVPYIGAIVAPLNHRWSFEEAAQALELVRPSAFIFDGAYSSWALRLTES 121
Query: 125 -AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGT 182
+ S+ +++++G +S + ++ D ++ S R T AP +ICFTSGT
Sbjct: 122 KSFSSIGFYLTVGDPAST-CQGANFVSVDHIR-RSWRGTTVTEPMSAPRDVALICFTSGT 179
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TG PKGV ISH++LIVQSLAKIA+VGYGEDDVYLHTAPLCHIGG+SS +A LM G CHV
Sbjct: 180 TGQPKGVAISHTSLIVQSLAKIAVVGYGEDDVYLHTAPLCHIGGISSCLATLMAGGCHVL 239
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
IPKF++KSA++A+++H VT ITVPAIMADL + R K G SV KILNGGGGL E
Sbjct: 240 IPKFDAKSAIKAIQEHKVTCFITVPAIMADLLSYARKDKI-SGCGSVTKILNGGGGLSDE 298
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL-ETPGQLPQAFGNVTPNSVHQPQ 361
L+ A++ F A +ISAYGMTE SSLTFM + +P L ET QL +Q
Sbjct: 299 LINGASHLFFNAAIISAYGMTEACSSLTFMPINNPELQETKNQLS-----------NQSG 347
Query: 362 GVCVGKPAPHVELKVCSD----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
GVCVGKPAPHVE+++ D SS +G+ILTRG H M+ YW S S WLDT
Sbjct: 348 GVCVGKPAPHVEIRIDRDESNSSSSLMGKILTRGLHTMVGYWGNNTVDTSESVRNGWLDT 407
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G ID G +WL+GR+ GRIKSGGENVYPEEVE VL QHPG+ VV G+ ++RL E
Sbjct: 408 GDTGWIDRTGKLWLMGRQKGRIKSGGENVYPEEVELVLSQHPGVAKAVVFGVPDSRLGEK 467
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+V+CV +++ W+W ++ + + KE +S+ +L++HCR KNL+ FK PRL+ W +PFP
Sbjct: 468 IVSCVSIKDGWRWVDATAEHQGEGKE--VSAHILQEHCRIKNLSRFKVPRLYYHWSRPFP 525
Query: 538 LTSTGKIRRDEVRREVMSHLK 558
+T+TGKIRR+E++ EV++ ++
Sbjct: 526 VTTTGKIRREELKAEVLTCMQ 546
>gi|226530235|ref|NP_001143117.1| uncharacterized protein LOC100275595 [Zea mays]
gi|195614616|gb|ACG29138.1| hypothetical protein [Zea mays]
gi|413941827|gb|AFW74476.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 575
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 280/577 (48%), Positives = 370/577 (64%), Gaps = 23/577 (3%)
Query: 4 YSQAHICQCLSRIAAVKRNSVVTIT---GNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
+ Q HI QCL RI A + ++ + G R TG +FV V +LA GL + G+R G +V
Sbjct: 6 HRQGHIAQCLGRILACRGSATAAVAAGPGGRRLTGAEFVDGVRSLAAGLADRGVRPGHVV 65
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
A ALNS Y++ LAV + G I+APLNYRWSF+EA++A+ +RP D + SW L
Sbjct: 66 AAVALNSVEYVQLFLAVTYAGAIIAPLNYRWSFEEAAQAVELVRPTAFAFDGAFSSWALR 125
Query: 121 L-QHTAIPSLRWHVSLGSS--SSDFVNKRDMLTADILK--GYSLRSLPFTHSWAPEGAVI 175
L + PS+ ++ LG + + D+ G + + AP+ +
Sbjct: 126 LMEGDRFPSIGLYLLLGDPCRTGRAAAGCAVPITDVTGSLGGATAAAAMEPVSAPDDIAL 185
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDDVYLHTAPLCHIGG+SS MA+LM
Sbjct: 186 ICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDVYLHTAPLCHIGGVSSCMAVLM 245
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG--RDSVKKIL 293
G CHV PKF+++SA A+++H VT ITVPAIMADL + R ++ G R +V KIL
Sbjct: 246 AGGCHVLAPKFDARSAFAAIQEHGVTCFITVPAIMADLLSYARKEEMAPGCGRTTVTKIL 305
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
NGGGGLP L+ A+ SFP+A + SAYGMTE SSLTFM L P +L +
Sbjct: 306 NGGGGLPLHLVNAASQSFPRAAIFSAYGMTEACSSLTFMALTTP------KLQEPEPEPE 359
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPS 407
GVCVGKPAPHVE+++ D GSS G +LTRG H M+ YW A S
Sbjct: 360 TQPCGHHGGVCVGKPAPHVEIRIGMDDDGTTAGSSPTGNVLTRGLHTMVGYWANGKADSS 419
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
WLDTGD G +D+ GN+WL+GR GRIK+GGENVYPEEVE+VL QHPG+ VVV
Sbjct: 420 ECDRNGWLDTGDTGWVDEEGNLWLLGRHKGRIKTGGENVYPEEVESVLSQHPGVARAVVV 479
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ ++RL E VVACV +++ W W ++ + + +S ++L HCR K L+ FK PR
Sbjct: 480 GVPDSRLGERVVACVSVKDGWNWVDARAEHEHRGGGEEVSPQILHGHCRTKELSRFKVPR 539
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
+ WR+PFP+T+TGKIRR+E++RE+++ ++ LPSNL
Sbjct: 540 SYYQWRQPFPVTTTGKIRREELKRELLAAIR-LPSNL 575
>gi|242080461|ref|XP_002444999.1| hypothetical protein SORBIDRAFT_07g002550 [Sorghum bicolor]
gi|241941349|gb|EES14494.1| hypothetical protein SORBIDRAFT_07g002550 [Sorghum bicolor]
Length = 557
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 286/574 (49%), Positives = 375/574 (65%), Gaps = 35/574 (6%)
Query: 4 YSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAIS 63
+ Q HI QCL RI + + ++ V R +G +FV V +LA GL+ GLR G +VA
Sbjct: 6 HCQGHIAQCLGRILSCRGDATVAAAAGRRLSGAEFVDGVRSLAAGLVHRGLRPGHVVAAV 65
Query: 64 ALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESS-DSWYLELQ 122
ALNS Y++ LAV + G I+APLNYRWSF+EA++A+ ++P V D SW L L
Sbjct: 66 ALNSVEYVQLFLAVTYAGAIIAPLNYRWSFEEAAQAVELVQPSAFVFDGGVFSSWALRLM 125
Query: 123 HT-AIPSLRWHVSL------GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+ PS+ ++ L G +++DF + T I++ + P + AP +
Sbjct: 126 ESDRFPSIGLYLLLDDPCRIGHAAADFES-----TDHIMRRATATMEPVS---APADVAL 177
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDDVYLHTAPLCHIGG+SS MA+LM
Sbjct: 178 ICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDVYLHTAPLCHIGGISSCMAILM 237
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
G CHV IPKF++KSA +A+++ VTS ITVPAIMADL + R + +V KILNG
Sbjct: 238 AGGCHVLIPKFDAKSAFDAIQEQGVTSFITVPAIMADLLSYARKEMISDCGKTVTKILNG 297
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA-FGNVTP 354
GGGL +L+ A+ FP+A + SAYGMTE SSLTFM L P L+ P P + +G
Sbjct: 298 GGGLSLDLLNGASQLFPRAAIFSAYGMTEACSSLTFMALNVPKLQEPNNQPGSHYG---- 353
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSD----GSSHVGRILTRGAHVMLRYWDQFLAKPSVST 410
GVCVGKPAPHVE+++ D SS G ILTRG H M YW S
Sbjct: 354 -------GVCVGKPAPHVEIRIGMDDNNTSSSPTGNILTRGFHTMAGYWANNKVDSSDCV 406
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
WLDTGD G ID GN+WL+GR+ GRIK+GGENVYPEEVE VL QHPG+ +VVVGI
Sbjct: 407 RNGWLDTGDTGWIDKAGNLWLMGRQKGRIKTGGENVYPEEVELVLSQHPGVARVVVVGIP 466
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
++RL E V+ACV +R+ W+W + + K KE +S ++L HCR K L+ FK PR +
Sbjct: 467 DSRLGEKVIACVSIRDGWKWVHARTEHQGKGKE--VSPQILHDHCRMKKLSRFKVPRSYY 524
Query: 531 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
WR+PFP+T+TGKI+R+E++RE+++ ++ LPSNL
Sbjct: 525 QWRQPFPVTTTGKIKREELKREILAAIQ-LPSNL 557
>gi|125560037|gb|EAZ05485.1| hypothetical protein OsI_27701 [Oryza sativa Indica Group]
Length = 559
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 277/574 (48%), Positives = 376/574 (65%), Gaps = 30/574 (5%)
Query: 3 NYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
+ + HI CL A+ V ++GNR TG LA L +G+R G +VA+
Sbjct: 4 QHGRGHIAHCLG--GALAGRDTVAVSGNRRLTGAGLADGARRLAAALSNLGVRRGHVVAV 61
Query: 63 SALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ 122
A NS Y+E LAV +IGGI+APLNYRWSF+EAS+A+ ++P + + D S SW L L+
Sbjct: 62 VAFNSIEYIELFLAVTYIGGIIAPLNYRWSFEEASQALELVQPTVFIFDGSYSSWALRLK 121
Query: 123 HT-AIPSLRWHVSLG-----SSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVI 175
+ ++ S+ ++ LG S +++FV+ + G + R++ P + AP +
Sbjct: 122 ESNSLTSVNLYLFLGNLCSISQAANFVSVVSVEQIKRSSGGTTRAVEPVS---APNDVAL 178
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDD+YLHTAPLCHIGG+SS +A+LM
Sbjct: 179 ICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDIYLHTAPLCHIGGISSCLAILM 238
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R +K +V KILNG
Sbjct: 239 AGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYARKQKILNHGMTVTKILNG 298
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
GGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P ++ P G+ +
Sbjct: 299 GGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKIQEP---KDQLGSSS-- 353
Query: 356 SVHQPQGVCVGKPAPHVELK-----VCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 410
+GVCVGKPAPH+E++ S SS +G ILTRG H M YW S S
Sbjct: 354 -----EGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHTMSGYWVNNSIDTSDSV 408
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
WLDTGDIG +D G +WL+GR+ GRIK+GGENVYPEEVE+VL QHPG+ VV+G+
Sbjct: 409 RNGWLDTGDIGWVDKTGYLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLAKAVVIGMP 468
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
++RL E +VACV +R+ W W ++ + +E +S+++L+ HCR L+ FK PR++
Sbjct: 469 DSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDHCRTNKLSRFKVPRIYY 526
Query: 531 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
W KPFP+T+TGKIRR++++ E+++ +K L SNL
Sbjct: 527 QWSKPFPVTTTGKIRREQLKAEILASMK-LHSNL 559
>gi|357144587|ref|XP_003573345.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
chloroplastic/peroxisomal-like [Brachypodium distachyon]
Length = 553
Score = 506 bits (1303), Expect = e-140, Method: Compositional matrix adjust.
Identities = 266/561 (47%), Positives = 369/561 (65%), Gaps = 25/561 (4%)
Query: 7 AHICQCLSRIAAVKR--NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISA 64
HI CL I A +R ++V +G+ TG + V V LA GL + G++ GD+VA+
Sbjct: 4 GHIAHCLGGILAGRRAGSTVAVSSGDLCLTGAELVDGVRRLAAGLSDRGVQPGDVVAVVG 63
Query: 65 LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT 124
NS Y+E +LA+ ++G IVAP+NYRWSF+EA++A+ +RP + D SW L +
Sbjct: 64 FNSIEYMELLLAIPYVGAIVAPVNYRWSFEEAAQALELVRPSAFIFDGGYGSWARRLMDS 123
Query: 125 -AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+ + ++++G S + + ++ +K ++ AP +ICFTSGTT
Sbjct: 124 GSFSYVGLYLTMGDPVST-SHAANFVSVGHIKRSPRGTMVMEPVSAPRDVALICFTSGTT 182
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G PKGV ISH++LI+QSLAKIA+VGYGEDDVYLHTAPLCHIGG+SS +A+LM G CHV I
Sbjct: 183 GRPKGVAISHTSLIIQSLAKIAVVGYGEDDVYLHTAPLCHIGGISSCLAILMAGGCHVLI 242
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
PKF++KSA +A+++ VT ITVPAIMADL + R K+ G +V KILNGGGGL +EL
Sbjct: 243 PKFDAKSAFKAIQEQKVTCFITVPAIMADLLSYAR-KENISGCGAVTKILNGGGGLSAEL 301
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTL--YDPTLETPGQLPQAFGNVTPNSVHQPQ 361
+ +A+ F A + SAYGMTE SSLTFM + +P ET QL G
Sbjct: 302 INKASCLFLHAAIFSAYGMTEACSSLTFMAINKSEPQ-ETENQLSSHSG----------- 349
Query: 362 GVCVGKPAPHVELKV----CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
GVCVGKPAPHVE+++ + SS +G+ILTRG H M+ YW S S WLDT
Sbjct: 350 GVCVGKPAPHVEIQIGREDINSSSSPMGKILTRGLHTMVGYWANNTVDTSESVRNGWLDT 409
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G ID GN+WL+GR+ GRIKSGGENVYPEE+E VL QHPG+ +VV+G+ ++RL E
Sbjct: 410 GDTGWIDRTGNLWLMGRQKGRIKSGGENVYPEEIELVLSQHPGVAKVVVLGVPDSRLGEK 469
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+VACV + + W+W ++ + + KE +SS+ L++HCR L+ FK PRL+ WR+PFP
Sbjct: 470 LVACVNIMDDWKWVDATDEHQGEGKE--VSSQTLQEHCRINKLSRFKVPRLYHQWRRPFP 527
Query: 538 LTSTGKIRRDEVRREVMSHLK 558
+T+TGKI+R+E++ E+++ L+
Sbjct: 528 VTTTGKIKREELKTEILASLQ 548
>gi|222639859|gb|EEE67991.1| hypothetical protein OsJ_25931 [Oryza sativa Japonica Group]
Length = 1338
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/531 (48%), Positives = 343/531 (64%), Gaps = 29/531 (5%)
Query: 3 NYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
+ + HI CL A+ V ++GNR TG LA L +G+R G +VA+
Sbjct: 4 QHGRGHIAHCLG--GALAGRDTVAVSGNRRLTGAGLADGARRLAAALSNLGVRRGHVVAV 61
Query: 63 SALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ 122
A NS Y+E LAV +IGGI+APLNYRWSF+EAS+A+ ++P + + D S SW L L+
Sbjct: 62 VAFNSIEYIELFLAVTYIGGIIAPLNYRWSFEEASQALELVQPTVFIFDGSYSSWALRLK 121
Query: 123 HT-AIPSLRWHVSLG-----SSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVI 175
+ ++ S+ ++ LG S +++FV+ + G + R++ P + AP +
Sbjct: 122 ESNSLTSVNLYLFLGNLCSISQAANFVSVVSVEQIKRSSGGTTRAVEPVS---APNDVAL 178
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDD+YLHTAPLCHIGG+SS +A+LM
Sbjct: 179 ICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDIYLHTAPLCHIGGISSCLAILM 238
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R +K +V KILNG
Sbjct: 239 AGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYARKQKILNHGMTVTKILNG 298
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
GGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P ++ P G+ +
Sbjct: 299 GGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKIQEP---KDQLGSSS-- 353
Query: 356 SVHQPQGVCVGKPAPHVELK-----VCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVST 410
+GVCVGKPAPH+E++ S SS +G ILTRG H M YW S S
Sbjct: 354 -----EGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHTMSGYWVNNSIDTSDSV 408
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
WLDTGDIG +D GN+WL+GR+ GRIK+GGENVYPEEVE+VL QHPG+ VV+G+
Sbjct: 409 RNGWLDTGDIGWVDKTGNLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLAKAVVIGMP 468
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
++RL E +VACV +R+ W W ++ + +E +S+++L+ HCR L+
Sbjct: 469 DSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDHCRTNKLS 517
>gi|168018797|ref|XP_001761932.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686987|gb|EDQ73373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 592
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/588 (43%), Positives = 348/588 (59%), Gaps = 58/588 (9%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIG-LRSGDI 59
M AHI Q L R ++ ++ +R + F Q V+ LA GL E G L+ GD
Sbjct: 1 MGRNRGAHIGQAL-RALHTRKGTIKC--EDRVQSLSHFAQRVVTLAAGLSEGGGLQPGDR 57
Query: 60 VAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYL 119
VAI++LNSEWYLEW AV GGIVAPLNYRWS +EAS A+ I MLV D++ +
Sbjct: 58 VAIASLNSEWYLEWFFAVTCAGGIVAPLNYRWSVEEASEAVKQIGATMLVLDQTCLQQWP 117
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
+L HT LR + LG + VN ++LT ++ WAP+ +ICFT
Sbjct: 118 DL-HTRCRLLRLQILLGPGLNSLVNPDEVLT------WAGSKQELDLKWAPDSIALICFT 170
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
SGTTGSPKGV ISH+AL+VQSLAKIA++GY DVYLH +PLCHIGG+SSA+A +MVGA
Sbjct: 171 SGTTGSPKGVAISHNALVVQSLAKIAVIGYNSSDVYLHISPLCHIGGISSALANVMVGAS 230
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
HV +PKF + + +A+ H VTS+I VPA++ADL S++ +LNG GG+
Sbjct: 231 HVILPKFHAAAVFDAIRNHDVTSMIIVPAMLADLVATSASSIGRHSFTSIRTLLNGAGGI 290
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P+ L+ FP A+L SAYGMTE SS++F+ + + ++ GQL
Sbjct: 291 PALLLDSTRLLFPNAELFSAYGMTEACSSMSFIPVDEQ--DSTGQL-------------- 334
Query: 360 PQGVCVGKPAPHVELKV-----------CSDGSS------HVGRILTRGAHVMLRYWDQF 402
GVCVGK APHVEL++ + SS G++ TRG HVM YW
Sbjct: 335 -GGVCVGKAAPHVELRIGQPVTEQKSIDSHENSSPESVLFREGQVFTRGPHVMEYYWGLP 393
Query: 403 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE-VEAVLLQHPGI 461
+V + + WL TGD+G +D+ G +WL+GR IKSGGENVY E VE VL++HPG+
Sbjct: 394 SETANVLSADGWLATGDVGWMDEAGRLWLLGRSKDVIKSGGENVYASEVVENVLMKHPGM 453
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSE-----------SNCDQSSKNKELLLSSEV 510
+ + VVGI + RLTEMVVA VRLR+ W W + SN Q + + S++
Sbjct: 454 LSVAVVGIPDERLTEMVVAFVRLRDKWIWEDKYQGKLSVTGASNQIQLEDYRGNRVVSQI 513
Query: 511 -LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
LR HC++ L+ +K PRL ++ ++PFP TSTGKI+++ VRR + L
Sbjct: 514 ELRIHCQQLGLSRYKVPRLILVNKEPFPTTSTGKIKKNLVRRMALERL 561
>gi|413941825|gb|AFW74474.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 449
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/404 (54%), Positives = 281/404 (69%), Gaps = 15/404 (3%)
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
AP+ +ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDDVYLHTAPLCHIGG+S
Sbjct: 53 APDDIALICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDVYLHTAPLCHIGGVS 112
Query: 229 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG--R 286
S MA+LM G CHV PKF+++SA A+++H VT ITVPAIMADL + R ++ G R
Sbjct: 113 SCMAVLMAGGCHVLAPKFDARSAFAAIQEHGVTCFITVPAIMADLLSYARKEEMAPGCGR 172
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
+V KILNGGGGLP L+ A+ SFP+A + SAYGMTE SSLTFM L P +L
Sbjct: 173 TTVTKILNGGGGLPLHLVNAASQSFPRAAIFSAYGMTEACSSLTFMALTTP------KLQ 226
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWD 400
+ GVCVGKPAPHVE+++ D GSS G +LTRG H M+ YW
Sbjct: 227 EPEPEPETQPCGHHGGVCVGKPAPHVEIRIGMDDDGTTAGSSPTGNVLTRGLHTMVGYWA 286
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
A S WLDTGD G +D+ GN+WL+GR GRIK+GGENVYPEEVE+VL QHPG
Sbjct: 287 NGKADSSECDRNGWLDTGDTGWVDEEGNLWLLGRHKGRIKTGGENVYPEEVESVLSQHPG 346
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
+ VVVG+ ++RL E VVACV +++ W W ++ + + +S ++L HCR K L
Sbjct: 347 VARAVVVGVPDSRLGERVVACVSVKDGWNWVDARAEHEHRGGGEEVSPQILHGHCRTKEL 406
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
+ FK PR + WR+PFP+T+TGKIRR+E++RE+++ ++ LPSNL
Sbjct: 407 SRFKVPRSYYQWRQPFPVTTTGKIRREELKRELLAAIR-LPSNL 449
>gi|302769520|ref|XP_002968179.1| hypothetical protein SELMODRAFT_89333 [Selaginella moellendorffii]
gi|300163823|gb|EFJ30433.1| hypothetical protein SELMODRAFT_89333 [Selaginella moellendorffii]
Length = 458
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/492 (43%), Positives = 292/492 (59%), Gaps = 48/492 (9%)
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
SE+YLEW+LAV GGIV PLNYRWSF EA+ AI +RP +LV DE W L
Sbjct: 1 SEYYLEWMLAVPCAGGIVTPLNYRWSFDEANAAIQLVRPAILVLDEQCRHWGEPLSEL-- 58
Query: 127 PSLRWHVSLG-SSSSDFVNKRDMLTADILKGYSLRSLPFTHS-----WAPEGAVIICFTS 180
W + + + + I + L FT + +AP +ICFTS
Sbjct: 59 --YPWMMQVFLEEDCESKFFFFLSFLRISPSWQL----FTETNLDLCFAPNNIALICFTS 112
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG+PKGV ++H AL+ QSLAK+AIVGY DVYLHTAPLCHIGG+SS +AM+M G+
Sbjct: 113 GTTGTPKGVSLTHRALVAQSLAKLAIVGYSSMDVYLHTAPLCHIGGISSVLAMVMAGSQQ 172
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKGRDSVKKILNGGGG 298
+F+PKFE+ + L+A++ + ++++I VP ++ D+ + R + + S+ ILNGGG
Sbjct: 173 LFLPKFETSAVLQALKDYEISTMIVVPTMLRDILEPGIFRKSGSDQVFPSMLTILNGGGS 232
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+PS L+ +FP A+L SAYGMTE SS+TF+ L G +P G+
Sbjct: 233 VPSRLLPAVKKTFPNARLFSAYGMTEACSSMTFLRL-------DGHVPLGVGS------- 278
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
CVGKP PHV++ + GRI TRG HVM YW Q + V + WLDTG
Sbjct: 279 -----CVGKPPPHVQVGIKD------GRIFTRGPHVMHGYWGQTIETAGVLQQDGWLDTG 327
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIG ID GN+WL+GR +K+GGENVY EVE VL QHP + + VVG+ +RL+E+V
Sbjct: 328 DIGKIDKAGNLWLLGRAKDVVKTGGENVYASEVEMVLSQHPSVSSVAVVGVPESRLSEIV 387
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A VRL + W WS S + +S LR HC ++ L+ +K P+L V + PFP+
Sbjct: 388 AAVVRLHDGWTWSIS-------EHPMTVSESDLRLHCSKQGLSRYKIPKLIVQRQDPFPV 440
Query: 539 TSTGKIRRDEVR 550
TSTGK+R+D ++
Sbjct: 441 TSTGKVRKDMIK 452
>gi|302788472|ref|XP_002976005.1| hypothetical protein SELMODRAFT_104722 [Selaginella moellendorffii]
gi|300156281|gb|EFJ22910.1| hypothetical protein SELMODRAFT_104722 [Selaginella moellendorffii]
Length = 458
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/492 (43%), Positives = 292/492 (59%), Gaps = 48/492 (9%)
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
SE+YLEW+LAV GGIVAPLNYRWSF EA+ AI +RP +LV DE W L
Sbjct: 1 SEYYLEWMLAVPCAGGIVAPLNYRWSFDEANAAIQLVRPAILVLDEQCRHWGEPLSEL-- 58
Query: 127 PSLRWHVSLG-SSSSDFVNKRDMLTADILKGYSLRSLPFTHS-----WAPEGAVIICFTS 180
W + + + + I + L FT + +AP +ICFTS
Sbjct: 59 --YPWMMQVFLEEDCESKFFFFLSFLRISPSWQL----FTETNLDLCFAPNNIALICFTS 112
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG+PKGV ++H AL+ QSLAK+AIVGY DVYLHTAPLCHIGG+SS +AM+M G+
Sbjct: 113 GTTGTPKGVSLTHRALVAQSLAKLAIVGYSSMDVYLHTAPLCHIGGISSVLAMVMAGSQQ 172
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADL--ATLIRVKKTWKGRDSVKKILNGGGG 298
+F+PKFE+ + +A++ + ++++I VP I+ D+ + R + + S+ ILNGGG
Sbjct: 173 LFLPKFETSAVRQALKDYNISTMIVVPTILRDILEPGIFRKSGSDQVFPSMLTILNGGGS 232
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+PS L+ +FP A+L SAYGMTE SS+TF+ L G +P G+
Sbjct: 233 VPSRLLPAVKKTFPNARLFSAYGMTEACSSMTFLRL-------DGHVPLGVGS------- 278
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
CVGKP PHV++ + GRI TRG HVM YW Q + V + WLDTG
Sbjct: 279 -----CVGKPPPHVQVGIKD------GRIFTRGPHVMHGYWGQTIETAGVLQQDGWLDTG 327
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIG ID GN+WL+GR +K+GGENVY EVE VL QHP + + VVG+ +RL+E+V
Sbjct: 328 DIGKIDKAGNLWLLGRAKDVVKTGGENVYASEVEMVLSQHPSVSSVAVVGVPESRLSEIV 387
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A VRL + W WS S + +S LR HC ++ L+ +K P+L V + PFP+
Sbjct: 388 AAVVRLHDGWTWSIS-------EHPMTVSESDLRLHCSKQGLSRYKIPKLIVQRQDPFPV 440
Query: 539 TSTGKIRRDEVR 550
TSTGK+R+D ++
Sbjct: 441 TSTGKVRKDMIK 452
>gi|302847703|ref|XP_002955385.1| hypothetical protein VOLCADRAFT_41779 [Volvox carteri f.
nagariensis]
gi|300259227|gb|EFJ43456.1| hypothetical protein VOLCADRAFT_41779 [Volvox carteri f.
nagariensis]
Length = 534
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 276/555 (49%), Gaps = 56/555 (10%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
TG Q + V L+R +L + + G +V + A S +E +LAV G I+ P+N+RW+
Sbjct: 1 TGSQVLHRVALLSRAILSLSITPGSVVVLVAQTSAAVMEAMLAVLDAGCILCPVNWRWTT 60
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E S+A+ + P +++ D S +L H A+ S + SS D N
Sbjct: 61 AELSQALVRLGPALVLFDISCS----DLVHKALVS-----AFPPSSLDLRNHHSQPPQPQ 111
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ L S P G ++ FTSGTT +PK V +SH+A +QSL K+A+VGY +D
Sbjct: 112 PQRQPEPQLQLLSS--PCGTALLVFTSGTTAAPKAVRLSHAAFHIQSLVKLALVGYCRED 169
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
YLH APL HIGGLSSA A LM G VF+P+FE + L + +H V++ I VP ++ DL
Sbjct: 170 TYLHLAPLFHIGGLSSAFAALMAGCTQVFLPRFEPRLVLRIIVRHTVSAFIAVPTMLQDL 229
Query: 274 --------------------ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
++ W V++IL G G +L +FP
Sbjct: 230 AAAATAAAAEAACGGSSSGSGGTSGLRPPW---GCVRRILVGAGPTSPQLQDAICRTFPG 286
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
A L+SAYGMTE SS+TF L + P + VCVG PAP V+
Sbjct: 287 ADLLSAYGMTEACSSMTFRHLSSAA-------SVSPSGTPPAAAAATSAVCVGWPAPGVQ 339
Query: 374 LKV-CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+++ ++ TRG HVML YW A + + WL TGD+G + G++WL+
Sbjct: 340 IRIRIRTEAAAADAGATRGPHVMLGYWGNSAATAEAISADGWLSTGDLGYLAQDGSLWLL 399
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR IKSGGENV+ EVEA L HP + + VVG+ + RL E V A V LR W + +
Sbjct: 400 GRAKDMIKSGGENVFAPEVEAALCSHPAVAAVAVVGLPDERLGEKVAALVVLRNEWSFQD 459
Query: 493 SNCDQSSKNKE--------------LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
++ S+ + + S L+ HCR + L GF+ PR R+P P
Sbjct: 460 TSTTSSTMSTNRNATTTTTTTTTSGCITSLADLQAHCRAQGLAGFRLPRFAAAQRQPLPT 519
Query: 539 TSTGKIRRDEVRREV 553
TS+GK+ + EVR +
Sbjct: 520 TSSGKVAKAEVRERL 534
>gi|215686893|dbj|BAG89743.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 283
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 187/283 (66%), Gaps = 12/283 (4%)
Query: 3 NYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
+ + HI CL A+ V ++GNR TG LA L +G+R G +VA+
Sbjct: 4 QHGRGHIAHCLG--GALAGRDTVAVSGNRRLTGAGLADGARRLAAALSNLGVRRGHVVAV 61
Query: 63 SALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ 122
A NS Y+E LAV +IGGI+APLNYRWSF+EAS+A+ ++P + + D S SW L L+
Sbjct: 62 VAFNSIEYIELFLAVTYIGGIIAPLNYRWSFEEASQALELVQPTVFIFDGSYSSWALRLK 121
Query: 123 HT-AIPSLRWHVSLG-----SSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVI 175
+ ++ S+ ++ LG S +++FV+ + G + R++ P + AP +
Sbjct: 122 ESNSLTSVNLYLFLGNLCSISQAANFVSVVSVEQIKRSSGGTTRAVEPVS---APNDVAL 178
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
ICFTSGTTG PKGV ISH++LI+QSLAKIAIVGYGEDD+YLHTAPLCHIGG+SS +A+LM
Sbjct: 179 ICFTSGTTGRPKGVAISHTSLIIQSLAKIAIVGYGEDDIYLHTAPLCHIGGISSCLAILM 238
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 278
G CHV IPKF+ KSA +A+ +H VTS ITVPAIMADL + R
Sbjct: 239 AGGCHVLIPKFDVKSAFDAILEHRVTSFITVPAIMADLLSYAR 281
>gi|115474651|ref|NP_001060922.1| Os08g0130400 [Oryza sativa Japonica Group]
gi|113622891|dbj|BAF22836.1| Os08g0130400 [Oryza sativa Japonica Group]
Length = 270
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/282 (47%), Positives = 187/282 (66%), Gaps = 18/282 (6%)
Query: 288 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 347
+V KILNGGGGL SEL+ A++ FP A + SAYGMTE SSLTFM L P ++ P
Sbjct: 2 TVTKILNGGGGLSSELITGASHLFPNATIFSAYGMTEACSSLTFMVLTRPKIQEP---KD 58
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRI-----LTRGAHVMLRYWDQF 402
G+ + +GVCVGKPAPH+E+++ +GS+ LTRG H M YW
Sbjct: 59 QLGSSS-------EGVCVGKPAPHIEIQINRNGSNSSSSSPIGNILTRGLHTMSGYWVNN 111
Query: 403 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 462
S S WLDTGDIG +D GN+WL+GR+ GRIK+GGENVYPEEVE+VL QHPG+
Sbjct: 112 SIDTSDSVRNGWLDTGDIGWVDKTGNLWLMGRQKGRIKTGGENVYPEEVESVLSQHPGLA 171
Query: 463 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
VV+G+ ++RL E +VACV +R+ W W ++ + +E +S+++L+ HCR L+
Sbjct: 172 KAVVIGMPDSRLGEKIVACVSIRDGWNWVDARAVHKGEGRE--VSAQMLQDHCRTNKLSR 229
Query: 523 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
FK PR++ W KPFP+T+TGKIRR++++ E+++ +K L SNL
Sbjct: 230 FKVPRIYYQWSKPFPVTTTGKIRREQLKAEILASMK-LHSNL 270
>gi|307107262|gb|EFN55505.1| hypothetical protein CHLNCDRAFT_133905 [Chlorella variabilis]
Length = 767
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 185/499 (37%), Positives = 248/499 (49%), Gaps = 41/499 (8%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEI-GLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLN 88
R + + V LA GL ++ G+++GD V +AL ++ +LE +LA G + APLN
Sbjct: 27 GRATSALEASSRVAALAAGLTQLLGMQAGDRVCTAALATDRHLEALLAATAGGAVAAPLN 86
Query: 89 YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNK--- 145
+RW EA+ A + +L+ D + L A P + L +D+ +
Sbjct: 87 WRWGGGEAAAAAALVGARLLLADAGCLRFALAAAVAAAPGAIDTLVLLGPPADYRQEELE 146
Query: 146 -----------RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
++ A +LRS AP A ++ FTSGTTG PKGV +SH+
Sbjct: 147 AAPPGLTLAFAEALMAACPDASLALRS-------APGNAALVVFTSGTTGKPKGVTLSHA 199
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEA 254
AL Q +AK+ GY DVYLH APL HIGGLSSA+AML GA H F+P+F+ + L A
Sbjct: 200 ALHAQCMAKLLACGYSSSDVYLHAAPLFHIGGLSSALAMLAAGARHAFLPRFDGAALLGA 259
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+ H TS I VP ++ADL T + +V+++L GGGGL L P A
Sbjct: 260 IRGHHATSFIAVPTMVADLLTAA-AEAGVASLPAVRRVLVGGGGLSPALRDGLAALCPAA 318
Query: 315 KLISAYGMTETSSSLTFMTLYDP-TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
L +AYGMTE +SSLTF TL+ P P + P GV VG+P P +E
Sbjct: 319 TLHAAYGMTEGASSLTFHTLWSPEAGAGAPGSSGGAPAAQPGARGPPGGVFVGRPPPGIE 378
Query: 374 LKVCSDGSSHV----------------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
L V G ++TRG+HVML YWD A + WL T
Sbjct: 379 LAVYQPPGGGGGGGGSGGGGGIRFAGEGEVVTRGSHVMLGYWDDEDATAAAQLPGGWLRT 438
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G + G +WL+GR IKSGGENV+ EVE L HP + VVG A+ RL E
Sbjct: 439 GDLGCLRQ-GQLWLMGRAKDMIKSGGENVHAWEVERALASHPAVAAAAVVGAADWRLGEA 497
Query: 478 VVACVRLRESWQWSESNCD 496
V A V LR W+W C
Sbjct: 498 VAAAVVLRPGWRWRGERCQ 516
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 18/75 (24%)
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP------------------FPLTSTGK 543
+E ++ L+QHCR L GFK PR+F+L P+ STGK
Sbjct: 675 EEAVVDGRALQQHCRAAGLAGFKLPRVFLLCDAAAAAATPGRASSPSSGGVVLPVNSTGK 734
Query: 544 IRRDEVRREVMSHLK 558
+ + +R++V H++
Sbjct: 735 VVKHLLRQQVQLHMQ 749
>gi|388493538|gb|AFK34835.1| unknown [Medicago truncatula]
Length = 166
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 133/170 (78%), Gaps = 4/170 (2%)
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
MLRYWDQ L S EVW DTGDIG +D GN+WL+GR NGRIKSGGEN+YPEEVEA+
Sbjct: 1 MLRYWDQTLTNTSNQRSEVWFDTGDIGLMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAI 60
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
LL+HPGI +V+VGI +AR TEMV AC++ RE+WQW E S+ N+E LS + L+Q+
Sbjct: 61 LLEHPGIARVVIVGIPDARFTEMVAACIQPRENWQWLE----HSTSNEEFHLSRKNLQQY 116
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSNL 564
C E NL+ FK P++F+ WRKPFPLT+TGKIRRD+VR+EV+S ++SL SNL
Sbjct: 117 CLENNLSRFKIPKIFIEWRKPFPLTATGKIRRDQVRKEVLSEIQSLHSNL 166
>gi|407803049|ref|ZP_11149887.1| long-chain-fatty-acid-CoA ligase [Alcanivorax sp. W11-5]
gi|407022904|gb|EKE34653.1| long-chain-fatty-acid-CoA ligase [Alcanivorax sp. W11-5]
Length = 516
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/561 (29%), Positives = 261/561 (46%), Gaps = 76/561 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
HI Q L R + T+ NR + F V LA GL+ +G++ D VAI ALNS
Sbjct: 2 HISQTLRRAVQLNGQGTATVFANRRQSWIAFENRVARLAAGLIGLGVKPADRVAILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ AV + G V P+N R + E + + +L D++ + +P
Sbjct: 62 DRYLEYFYAVPWAGAAVNPVNIRLAPPEIAYTLNDSGSKVLFVDDAFAAM--------LP 113
Query: 128 SLR------WHVSL---GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP-EGAVIIC 177
+LR HV G+ D ++ ++T +S P + + + +
Sbjct: 114 ALRPILKSVEHVVFTGDGTRPDDCIDYESLIT---------QSTPMADANSGGDDLAGLF 164
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 237
+T GTTG KGV++SH L+ +L +A +GY D VY+H P+ H+ ++S A+ +
Sbjct: 165 YTGGTTGRSKGVMLSHDNLVFNALNVVAEMGYDPDTVYMHAGPMFHLADMASTFAVTLAA 224
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
H +P+F+ + L ++Q VT+ + VP ++ LA+ +R+ + S+K++L G
Sbjct: 225 GTHGIVPRFDVDTVLAFIQQEKVTNTLLVPTMINLLASSVRIGE--YDVSSMKRMLYGAS 282
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVTPN 355
+P ++ A P YG TE S +T + P PG +L A
Sbjct: 283 PMPEAVLNSAMEQMPTVSFAQGYGQTEASPIITSL---GPEHHVPGGAKLRSA------- 332
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP-SVS 409
G+ A VE+ V VG I RG +VML YW A ++
Sbjct: 333 ----------GRAAIGVEVMVLDKDDQEVARGTVGEICARGPNVMLGYWGMESATAETLR 382
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP + V+GI
Sbjct: 383 NG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQECAVIGI 440
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ E V A V LR+ SE +E++ HCREK + G+K PR
Sbjct: 441 PDEHWGEAVHALVVLRDGVSASE---------------TEII-AHCREK-IAGYKVPRSV 483
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
+P P++ GKI ++E+R
Sbjct: 484 EFRSEPLPVSGAGKILKNELR 504
>gi|443671029|ref|ZP_21136150.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443416419|emb|CCQ14487.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 515
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 171/564 (30%), Positives = 266/564 (47%), Gaps = 84/564 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R AA + TI G+R T + + V LA GL IG+ +GD VA+ A NS
Sbjct: 2 YLTQGLHRSAATTPDRAATIFGDRVRTFTEQIDRVARLAAGLRSIGVDAGDRVAMLAFNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E++LAV + ++ P+N RWS E + A+ +L+ D++ + L+ A
Sbjct: 62 DRYSEYLLAVPWADAVLNPVNIRWSPVEVAYALNDSDTKVLLVDDTFGAMVPALR-PACA 120
Query: 128 SLRWHVSLGSSSS--------DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
L+ V G ++ D ++ D + G +L L +T
Sbjct: 121 GLQTIVYCGDGTTPEGMVSYEDLISSHDPIPDARRSGDALAGL--------------FYT 166
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD--VYLHTAPLCHIGGLSSAMAMLMVG 237
GTTG PKGV++SH+ L+ L +A G DD V LH AP+ H+ L++ + +M+G
Sbjct: 167 GGTTGFPKGVMLSHANLVTSGLGTVA-TGQLLDDASVLLHAAPMFHLADLAAWVGQVMLG 225
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPA---IMADLATLIRVKKTWKGRDSVKKILN 294
HV +P FE + L A+ H VT ++ VP ++ D TL + S+ ++L
Sbjct: 226 GTHVMVPFFEPTAVLGAIAAHAVTDVLLVPTMIQLLVDHPTLSEFDTS-----SLSRVLY 280
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
GG + + +++ P+A+L AYGMTE + + + E G
Sbjct: 281 GGSPISAGVLERTLARLPQARLTQAYGMTELAPVASLLWPEHHVGERIGS---------- 330
Query: 355 NSVHQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKPSVS 409
G+ APH E+++ DG + VG I RG HVML YW+ KP +
Sbjct: 331 ----------AGRAAPHSEIRIVGPDGKQLTTGSVGEICVRGGHVMLGYWN----KPEET 376
Query: 410 TGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
V W+ TGD+G +D G +++V R I +GGENVY EVE L HP ++ V
Sbjct: 377 AAAVRDGWMHTGDVGYLDADGFLFVVDRLKDMIITGGENVYSAEVECALSLHPAVLACAV 436
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+G+ + E V ACV L E + D+ LR+H R + G+K P
Sbjct: 437 IGVPDGEWGERVHACVVLAEGFP---PMVDE-------------LREHTRTL-VAGYKTP 479
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVR 550
R + + P++ GKI + E+R
Sbjct: 480 RT-IEFVTALPMSGAGKILKRELR 502
>gi|254426993|ref|ZP_05040700.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
gi|196193162|gb|EDX88121.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881]
Length = 516
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 165/561 (29%), Positives = 259/561 (46%), Gaps = 76/561 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I Q L R + T+ R T ++F + LA GLL +G+ +GD VAI ALNS
Sbjct: 2 YISQTLRRAVQLNGQGTATVFAGRRQTWREFEDRIACLANGLLSLGINAGDRVAILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ AV++ G V P+N R + E + + +L D++ + LQ +
Sbjct: 62 DRYLEYFYAVSWAGAAVNPVNIRLAPPEIAYTLNDSGSKVLFVDDTFAALLPSLQ-PQLE 120
Query: 128 SLRWHVSLGSSS--------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
S++ V +G V D + G L L +T
Sbjct: 121 SIKHVVFMGEGECPQGCIDYESLVANADRIRDANAGGDDLAGL--------------FYT 166
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
GTTG KGV++SH L+ +L +A +GY D +Y+H P+ H+ ++S A+ +
Sbjct: 167 GGTTGRSKGVMLSHDNLVFNALNVVAEMGYDSDTIYMHAGPMFHLADMASTFAVTLAAGT 226
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
H +P+F+ L +EQ VT+ + VP ++ LA+ R+ S+K++L G +
Sbjct: 227 HGIVPRFDVDEVLAFIEQEKVTNTLLVPTMVNLLASSGRIAN--YDVSSIKRMLYGASPM 284
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVTPNSV 357
P ++ A P YG TE S +T + P PG +L A
Sbjct: 285 PEAVLISAMEQMPTVSFAQGYGQTEASPIITSLG---PEHHIPGGEKLRSA--------- 332
Query: 358 HQPQGVCVGKPAPHVEL-------KVCSDGSSHVGRILTRGAHVMLRYWD-QFLAKPSVS 409
G+ A VE+ +V S G+ VG I RG +VML YW + ++
Sbjct: 333 --------GRAALGVEVVVLDENDQVVSQGT--VGEICARGPNVMLGYWGMESTTADTLR 382
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
G WL TGD+G +D+ G V++V R + SGGEN++ EVE + HP + V+GI
Sbjct: 383 NG--WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQECAVIGI 440
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ R E V A V LRE SE +E++ +HCRE+ + G+K PR
Sbjct: 441 PDERWGEAVHAIVVLREGEHASE---------------AEII-EHCRER-IAGYKVPRSV 483
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
+ P++ GK+ ++E+R
Sbjct: 484 DFKAESLPVSGAGKVLKNELR 504
>gi|308799771|ref|XP_003074666.1| acyl-activating enzyme 14 (ISS) [Ostreococcus tauri]
gi|116000837|emb|CAL50517.1| acyl-activating enzyme 14 (ISS) [Ostreococcus tauri]
Length = 515
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 255/535 (47%), Gaps = 75/535 (14%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEI--GLRSGDIVAISALNSEWYLEWILAVAFIGGIV 84
+T + G +FV+ V+ L+R + R ++V ++ S L LA+ GG+
Sbjct: 25 VTDDETLDGARFVERVIALSRVIRATLRARRGSNVVCVACETSASALACYLAIDVAGGVA 84
Query: 85 APLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN 144
LN RW+ EA+ A + D + + E+ W ++ ++
Sbjct: 85 VGLNSRWTATEATEAAGRCDAACAMVD----AKHFEM---------WGRDAFDGCANIID 131
Query: 145 KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 204
D ++ S +GA CFTSGTTG+ K V++H ++ + AKI
Sbjct: 132 -----VDDAVERTSEVGSEEMEKAREDGACAYCFTSGTTGAAKAAVLTHEGVLAATRAKI 186
Query: 205 AIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLI 264
+VGY DVY+H APL H+GGLSSA A + GA HVF+ F+++ AL A+E+ VT+ I
Sbjct: 187 EVVGYERSDVYMHCAPLYHVGGLSSAHASMSAGASHVFMRSFDAERALGAIERSGVTAFI 246
Query: 265 TVPAIMADL--ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 322
VP +MA L A RV DSV+KIL G G L + FP AK+ AYGM
Sbjct: 247 AVPTMMAMLVDAAGERVF------DSVRKILVGAGRLLRGQYEAIRRVFPNAKVTMAYGM 300
Query: 323 TETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS 382
+ET+SS+TF+ DP G+L V P G+ VE++ ++G
Sbjct: 301 SETTSSVTFL---DP---EDGRL-----------VEDP--TFAGQAVRDVEVRADANGEL 341
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID--------DGGNVWLVGR 434
HV RG VML Y + K + + W TGD+G + G VWL GR
Sbjct: 342 HV-----RGPIVMLGY--HGVDKSTTFDADGWFATGDLGRVAPAETSSACTGPRVWLYGR 394
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
IK+GGENV PEEVE V+ H + VVVG + + E VVA V+LR Q + +
Sbjct: 395 AKAVIKTGGENVSPEEVEGVINAHEDVHTSVVVGAPHEKWGETVVAIVKLR---QGTSLS 451
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
D++ + + CR+ L FK P+ ++L+ P+ GK R +V
Sbjct: 452 VDEARPT---------VLEWCRDSRLARFKIPK-YILFTNEIPINMMGKFSRADV 496
>gi|71278812|ref|YP_267411.1| AMP-binding enzyme family protein [Colwellia psychrerythraea 34H]
gi|71144552|gb|AAZ25025.1| AMP-binding enzyme family protein [Colwellia psychrerythraea 34H]
Length = 520
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 163/552 (29%), Positives = 264/552 (47%), Gaps = 52/552 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q L R A + N++ T G+R T ++ Q V LA L+E G+ + VAI A+NS
Sbjct: 2 YFYQALQRNATIFSNNIGTSFGDRERTWKEVEQRVAKLAGALVEHGVGQENHVAILAMNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E+ A+ +IGG+V PLN RWS KE ++ + + +L D++ +LE+
Sbjct: 62 DQYFEYYNAIPWIGGVVVPLNIRWSIKENIYSLENSQSSVLFVDDA----FLEMGKELAK 117
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+ + D ML + L ++ P + ++ I +T GTTG PK
Sbjct: 118 QCE-KIQVIIYMGDGETPAGMLNYEQLIEHADAIAPVENDYSKLAG--IFYTGGTTGFPK 174
Query: 188 GVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
GV++SH+ L S+ A +G + YLH AP+ H+ + + AM++ G VF+P F
Sbjct: 175 GVMLSHTNLWSSSIVVTAEMGLNVAGERYLHAAPMFHLADVGVSYAMVIGGLSQVFVPYF 234
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E+ S +EA+E V ++ VP ++ + + S+K I+ G +P +
Sbjct: 235 EATSVIEAIEHKQVNHVLLVPTMVTMMLATPALDNA--NFSSLKHIIYGASPMPEGTLIA 292
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAFGNVTPNSVHQPQGVC 364
A K I AYG +E S ++ + LE P G+L A
Sbjct: 293 AMEKMSSVKFIQAYGQSELSPVISILPAEYHVLEGPNAGKLRSA---------------- 336
Query: 365 VGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+PA V +++ + + VG I G + ML YW+ + + + + W+ TGD
Sbjct: 337 -GRPAYCVSVEMRDENGKVLPTGKVGEIAASGPNSMLGYWNN-TEQTAATLIDGWVLTGD 394
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
G +D+ G ++LV R I +GGENV+ EVE L HP I VV+GI + + E V
Sbjct: 395 AGYMDEDGFIFLVDRLKDMIVTGGENVFSAEVENALSHHPAIQESVVLGIPSEQWGESVH 454
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A +RL E + ++ E + HCRE + G+K P+ + + FP+T
Sbjct: 455 AILRLNEGQE----------------ITDEEIFSHCREY-IAGYKVPQSIEIRVEAFPIT 497
Query: 540 STGKIRRDEVRR 551
GKI ++E+R
Sbjct: 498 GAGKIMKNELRE 509
>gi|408375511|ref|ZP_11173177.1| long-chain-fatty-acid-CoA ligase [Alcanivorax hongdengensis A-11-3]
gi|407764638|gb|EKF73109.1| long-chain-fatty-acid-CoA ligase [Alcanivorax hongdengensis A-11-3]
Length = 516
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 162/553 (29%), Positives = 262/553 (47%), Gaps = 60/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I Q L R + T+ R T ++F + LA GLL +G+ +GD VAI ALNS
Sbjct: 2 YISQTLRRAVQLNGQGTATVFAGRRQTWREFEDRIACLANGLLSLGINAGDRVAILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ AV + G V P+N R + E + + +L D++ + LQ +
Sbjct: 62 DRYLEYFYAVPWAGAAVNPVNIRLAPPEIAYTLNDSGSKVLFVDDTFAALLPSLQ-PQLE 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
S++ V +G + + + L + R + ++ + A + +T GTTG K
Sbjct: 121 SIKHVVFMGEGEC----PQGCIDYESLVANAGR-IRDANAGGDDLAGLF-YTGGTTGRSK 174
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFE 247
GV++SH L+ +L +A +GY D +Y+H P+ H+ ++S A+ + H +P+F+
Sbjct: 175 GVMLSHDNLVFNALNVVAEMGYDSDTIYMHAGPMFHLADMASTFAVTLAAGTHGIVPRFD 234
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
L +EQ VT+ + VP ++ LA+ R+ S+K++L G +P ++ A
Sbjct: 235 VDEVLAFIEQEKVTNTLLVPTMVNLLASSGRIAN--YDVSSIKRMLYGASPMPEAVLISA 292
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVTPNSVHQPQGVCV 365
P YG TE S +T + P PG +L A
Sbjct: 293 MEQMPTVSFAQGYGQTEASPIITSL---GPEHHIPGGEKLRSA----------------- 332
Query: 366 GKPAPHVEL-------KVCSDGSSHVGRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDT 417
G+ A VE+ +V S G+ VG I RG +VML YW + ++ G WL T
Sbjct: 333 GRAALGVEVVVLDENDQVVSQGT--VGEICARGPNVMLGYWGMESTTADTLRNG--WLHT 388
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G +D+ G V++V R + SGGEN++ EVE + HP + V+GI + R E
Sbjct: 389 GDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPEVQECAVIGIPDERWGEA 448
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V LRE SE+ + +HCRE+ + G+K PR + P
Sbjct: 449 VHAIVVLREGEHASEAE----------------IIEHCRER-IAGYKVPRSVDFKAESLP 491
Query: 538 LTSTGKIRRDEVR 550
++ GK+ ++E+R
Sbjct: 492 VSGAGKVLKNELR 504
>gi|375101721|ref|ZP_09747984.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374662453|gb|EHR62331.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 507
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 168/566 (29%), Positives = 265/566 (46%), Gaps = 78/566 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + TI G+R VQ V LA GL +G+ SGD VA+ ALNS
Sbjct: 2 YLTQPLHRALQQFPDRIATIHGDRARDFTTHVQRVARLAGGLRSLGVESGDRVAMYALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE ++AV + ++AP+N RW+ E + +L+ D++ L P
Sbjct: 62 DRYLEHLMAVPWADAVLAPVNTRWAEPEVVYGLNDCDARVLLVDDTFAPAVPALL-AECP 120
Query: 128 SLRW--HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
++ + G + +V+ D++ A +P + + +T GTTG+
Sbjct: 121 GVKHVVYAGEGPTPEGWVSYEDLVAA-------CDPVPDARRGG-DALAALFYTGGTTGA 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGY--GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
PKGV +SH+ ++ +L +A G+ +LH AP+ H+G L+ + + G V I
Sbjct: 173 PKGVALSHAGMLTSALGCVA-TGFMTTPGGRFLHAAPMFHLGDLAHWVMQSLTGNTQVTI 231
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-----SVKKILNGGGG 298
P F+ + L A+ +H VT L VP T++R+ D +++++
Sbjct: 232 PAFDPAALLAALPEHGVTDLFLVP-------TMLRIVLDHPDFDPAAFAGLRRLVYAAAP 284
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+P+EL+ A+ FP +L+ AYGMTE S ++T + P+
Sbjct: 285 MPAELLDRASELFPHVELVQAYGMTELSPAITLLG--------------------PSDHA 324
Query: 359 QPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
P G+ APH E++V + DG VG I+TRG H+ML YW KP + T EV
Sbjct: 325 GPHRYSAGRAAPHSEVRVVAPDGGEVPRGTVGEIVTRGGHLMLGYW----GKPEL-TAEV 379
Query: 414 ----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
W+ TGD G +D+ G +++V R I +GGENVY EVE VL +HP + V+G+
Sbjct: 380 VRDGWMHTGDAGYLDEAGYLYVVDRIKDMIITGGENVYSAEVENVLHEHPLVATCAVIGL 439
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ R E V A V D+ E L H R + L +K PR +
Sbjct: 440 PDDRYGERVHAVV---------VPAGDRHPDPAE-------LDAHVRAR-LANYKVPRGY 482
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMS 555
+ PL+ GK+ + E+R S
Sbjct: 483 DFVDE-LPLSGAGKVLKHELRSRFRS 507
>gi|145341146|ref|XP_001415675.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575898|gb|ABO93967.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 356
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 197/386 (51%), Gaps = 54/386 (13%)
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
+C+TSGT+GSPK V++SH ++ + AK+ +VGY D YLH APL H+GGLSSA A L
Sbjct: 1 MCYTSGTSGSPKAVMLSHGSVCAATRAKLEVVGYDAGDTYLHVAPLYHVGGLSSAHATLA 60
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SVKK 291
GA HVF+ KF+ L + VT+ I VPA+M +L +G D +V+K
Sbjct: 61 AGANHVFVNKFDPDLVLRIIVDEGVTAFIAVPAMMRELV-------DSRGGDTVFPTVRK 113
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
IL G G L EL + FP AK+ AYGMTET+SS+TF++ D E
Sbjct: 114 ILVGAGRLTDELYNSIRHVFPNAKVTMAYGMTETTSSVTFLSPEDARFEL---------- 163
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
G AP VE+K ++ G++L RG+ +ML Y + +
Sbjct: 164 -------DADSTFAGNAAPGVEVKTDAE-----GQLLVRGSSLMLGYVG--VDRTETFDA 209
Query: 412 EVWLDTGDIGSI------DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ W TGD+G++ + G VWL GR IKSGGENV PEEVE +L +H + V
Sbjct: 210 DGWFATGDLGAVGEARGEETGSRVWLRGRAKEMIKSGGENVSPEEVERILNKHANVEASV 269
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V+G + + E VVA V+LR + +E+ LR C + L FK
Sbjct: 270 VIGAPHRKWGEAVVAIVKLRATASDTEAE------------HRTALRDWCAKSELARFKI 317
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRR 551
P+ FV + + + GK+ RD R
Sbjct: 318 PKCFV-FTEDLRSNAMGKLMRDATYR 342
>gi|110833045|ref|YP_691904.1| long-chain-fatty-acid-CoA ligase [Alcanivorax borkumensis SK2]
gi|110646156|emb|CAL15632.1| long-chain-fatty-acid-CoA ligase, putative [Alcanivorax borkumensis
SK2]
Length = 516
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 254/560 (45%), Gaps = 74/560 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I Q L R + TI R T ++F + LA GL+ +G+ SGD VAI +LNS
Sbjct: 2 YITQTLRRAVQLNGEGTATIFAGRRQTWKKFEDRIARLANGLVGLGVESGDRVAILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y+E+ AV + G V P+N R + E + + +L D++ S L +
Sbjct: 62 DRYMEYFYAVPWAGAAVNPINIRLAPPEIAFTLNDSGSKILFIDDTF-SALLPILRPQFE 120
Query: 128 SLRWHVSLGSS---------SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
S++ V +G S V M D G L L +
Sbjct: 121 SIKHVVFIGDGECPEGCIDYESLIVQSERMSDVD-AGGDDLAGL--------------FY 165
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGA 238
T GTTG KGV++SH L+ +L +A +GYG D VY+H AP+ H+ ++S A+ +
Sbjct: 166 TGGTTGRSKGVMLSHDNLVFNALNVVAEMGYGRDTVYMHAAPMFHLADMASTFAVTLAAG 225
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
H +P+F+ L +E+ +T + VP ++ LA+ R+ S++++L G
Sbjct: 226 THGIVPRFDVDEVLAFIEREKITDALLVPTMVNLLASSGRIAN--YDVSSIRRMLYGASP 283
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG--QLPQAFGNVTPNS 356
+P ++ A PKA YG TE S +T + P G +L A
Sbjct: 284 MPEAVLISAMEQMPKASFAQGYGQTEASPIITTLA---PEFHVAGGEKLRSA-------- 332
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWD-QFLAKPSVST 410
G+ A VE+ V ++ VG I RG +VM YW + + ++
Sbjct: 333 ---------GRAALGVEVMVVNENDEEVPRGTVGEICVRGGNVMRGYWGMESTTEETLRN 383
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
G WL TGD+ +D+ G V++V R + SGGEN++ EVE + H + V+GI
Sbjct: 384 G--WLHTGDLAYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHSAVQECAVIGIP 441
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+ + E V A V L E SE++ + HCREK + G+K PR
Sbjct: 442 DEKWGESVHAIVVLCEGSSASETD----------------IIDHCREK-IAGYKVPRSIE 484
Query: 531 LWRKPFPLTSTGKIRRDEVR 550
+P P++ GK+ ++E+R
Sbjct: 485 FRSEPLPISGAGKVLKNELR 504
>gi|432340355|ref|ZP_19589799.1| AMP-binding acyl-CoA synthetase [Rhodococcus wratislaviensis IFP
2016]
gi|430774636|gb|ELB90220.1| AMP-binding acyl-CoA synthetase [Rhodococcus wratislaviensis IFP
2016]
Length = 515
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 166/556 (29%), Positives = 270/556 (48%), Gaps = 63/556 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + N +T+ G+R +T + V LA LL +G+ GD V + +LNS
Sbjct: 2 YLTQSLHRAVQQRPNQPMTVCGDRIHTSSETGDRVARLAGALLGLGVGVGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E+ A +IGG+V PLN RWS E + A+ + +L+ D++ E++ T P
Sbjct: 62 DRYHEYFFATWWIGGVVNPLNTRWSAAEIAFALEDSQTTVLLVDDTFVPLLDEMR-TLFP 120
Query: 128 SLRWHVSLGSS-SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
SLR V G + D + + + L A LR T + I +T GT+G P
Sbjct: 121 SLRAVVHCGDQPTPDGLLRYEDLVATAEPVEDLRVGGDTLAG-------IFYTGGTSGRP 173
Query: 187 KGVVISHSALIVQSLAKI-----AIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
KGV+++H L+ SL + A+ G L +AP+ H+ L+S + G V
Sbjct: 174 KGVMLTHLNLMTASLGSLAANHTAVAG----SRALLSAPMFHLAALASWNGQNIAGGILV 229
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+P FE +AL +E+ + S++ VP ++ L L ++ + S+ I G +
Sbjct: 230 MLPSFEPAAALRLIEERRINSMLLVPTMIQML--LRHPEREIRDLSSITAIQYGASPISE 287
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
L+++A +FPKA + YGMTE LT ++ D T +L A
Sbjct: 288 TLLRQAQRAFPKADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA------------- 332
Query: 362 GVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+P HVE++V D + VG I+ RG ++M YW++ + + + + WL
Sbjct: 333 ----GRPMGHVEVRVVDDRGNELPRGEVGEIIARGGNIMTGYWNR-PEETAAALRDGWLY 387
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD G +D+ G +++V R I SGGENVY EVE L HP ++ V+G+ + R E
Sbjct: 388 TGDGGYMDEDGYLFVVDRLKDMIISGGENVYSTEVENALASHPDVVQCAVIGVPDDRFGE 447
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A + ++ + CD +R H + K + G+K+PR + +
Sbjct: 448 RVHAFLVMKPG---TSLTCDD-------------VRAHAK-KLIAGYKSPRSITIVEQ-M 489
Query: 537 PLTSTGKIRRDEVRRE 552
P++ GKI + E+RR+
Sbjct: 490 PVSPAGKILKRELRRQ 505
>gi|346421738|gb|AEO27382.1| AMP-dependent synthetase and ligase [Pseudomonas sp. 19-rlim]
Length = 514
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 256/559 (45%), Gaps = 60/559 (10%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I Q L + + T+ R T QQ + + A L +GL +GD VA+ A+NS+
Sbjct: 3 ITQLLEQAVHSRGQHTATLCAGRERTWQQLGERIPRAAAALQALGLEAGDTVAVLAMNSD 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
Y+E AV + GG++APLN RWS +E A+ R L+ DE+ +L +P+
Sbjct: 63 NYIETFFAVPWAGGVLAPLNIRWSVQENRYALEDSRARFLLVDENFAEQARQLA-AQLPA 121
Query: 129 LRW--HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
L H+ G + +D ++ S R A +I +T GTTG P
Sbjct: 122 LERVIHIGQGPAPADMPGYEQLIEQYPAIADSGR--------ADNDLYVIFYTGGTTGHP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV +SH A+ +L+ ++++ + +++ H SS + + G H+ +PKF
Sbjct: 174 KGVAMSHRAIYFSALSYLSMLTHTRHLRHIYVPGFFHFAAASSVWYITLSGGTHIVLPKF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E + ++ V QH T+ + VP ++ L T + S+K + GG +P LM+
Sbjct: 234 EMHTFMQGVSQHRATNTVLVPTMINMLMTHPDFSQ--YDLSSLKTCIYGGSPMPEALMRR 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A P + YGMTET T + D T A GN ++ G
Sbjct: 292 AIELLPDWQFRQIYGMTETGGFATMLHWEDHT---------ADGNRIKSA---------G 333
Query: 367 KPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG---EVWLDTG 418
+PAP V L++ + V G I R +M D +L P + + W+ TG
Sbjct: 334 QPAPGVSLRIVDSTGAPVAANVLGEICIRSTALM----DGYLHSPDSTQAVLHDGWMHTG 389
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D G +D+ G +++ R I SGGENVY EVE VL HP + V+G+ + + E V
Sbjct: 390 DAGYLDEQGFLFVADRYKDMIVSGGENVYSVEVERVLYLHPAVQEAAVIGVPHQQWGESV 449
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V LR+ Q +++ L Q CRE ++ G+K PR +P P
Sbjct: 450 HALVVLRQGAQ----------------ATAQELMQFCRE-HIAGYKVPRSIDFQDQPLPT 492
Query: 539 TSTGKIRRDEVRREVMSHL 557
T GKIR++ +R + +S L
Sbjct: 493 TPVGKIRKNVIRDQYLSRL 511
>gi|304311374|ref|YP_003810972.1| AMP-dependent synthetase/ligase [gamma proteobacterium HdN1]
gi|301797107|emb|CBL45323.1| AMP-dependent synthetase and ligase [gamma proteobacterium HdN1]
Length = 516
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 162/559 (28%), Positives = 254/559 (45%), Gaps = 72/559 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I Q L R + N V TI NR + ++F V LA G+ + + GD VAI +LNS+
Sbjct: 3 ISQTLRRAVQLNPNGVATIYANRKQSWREFEHRVARLAAGVRSLKVADGDRVAILSLNSD 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
YLE+ A+ + G + P+N R + E + + R +L D++ S L + + +
Sbjct: 63 RYLEYFYAIPWAGMALNPINIRLAPPEIAYTLNDSRSSVLFVDDAF-SAMLPVLRPLLHN 121
Query: 129 LRWHVSLGSSS--------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+ V +G +++ L G L L +T
Sbjct: 122 VSHVVFMGEGELPEGCVAYESLIDQHKPLADRSEGGAQLAGL--------------FYTG 167
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG KGV++SH L+ +L + +GYG D +Y+H AP+ H+ ++S A+ + G H
Sbjct: 168 GTTGRSKGVMLSHDNLVFNALNVVPEMGYGTDSIYMHAAPMFHLADMASTFAVTLAGGSH 227
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+P+F+ L +E+ +T + VP ++ L + ++K SVK++L G +P
Sbjct: 228 GIVPRFDVADVLSFMEREKITHTLLVPTMINLLVSSGKIKDF--DVSSVKRMLYGASPMP 285
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLT-----FMTLYDPTLETPGQ--LPQAFGNVT 353
++ A P A YG TE S +T F + L + G+ L +
Sbjct: 286 EAVLVSAMEQMPDALFAQGYGQTEASPIITALGPEFHVVGGAKLRSAGRAALGVEVAIMD 345
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKP-SVSTGE 412
+ V P+G VG I RG +VML YW A ++ +G
Sbjct: 346 KDDVELPRG--------------------EVGEICARGPNVMLGYWGMEQASAETLRSG- 384
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WL TGD+G +D+ G V++V R I SGGEN++ EVE + HP + VVGI +
Sbjct: 385 -WLHTGDLGYMDEDGFVFIVDRAKDMIISGGENIFSVEVEGAIYSHPSVRECAVVGIPHD 443
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
EMV A V L+E +E ELL HCR + G+K PR
Sbjct: 444 EWGEMVHAIVVLKEGHGLNEG---------ELL-------AHCRAL-IAGYKLPRSIEFR 486
Query: 533 RKPFPLTSTGKIRRDEVRR 551
+P P++ GKI ++E+R+
Sbjct: 487 SEPLPVSGAGKILKNELRK 505
>gi|410611684|ref|ZP_11322777.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
gi|410168723|dbj|GAC36666.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
Length = 519
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 258/551 (46%), Gaps = 51/551 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
I L R A + + TI +R T Q V LA GL ++G++ GD VA+ +LNS
Sbjct: 2 QIASILRRAAQINPKGIATIYEDRQQTWTQMQDRVARLAGGLQKLGMKLGDRVALLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ ++E+ A + GG + P+N RW+ E + A+ +L+ DE+ EL+ + +
Sbjct: 62 DRFIEYYFASVWGGGAMMPMNIRWAAAECAYALNDAGAEILIVDEAFKGVAAELK-SQVQ 120
Query: 128 SLRWHVSLGSSSS--DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
L+ + G + + N D++ + + R A + I +T GTTG
Sbjct: 121 GLKTIIYCGDAETPDGMQNYEDIVACNAPVADAGR--------AGDDLAGIFYTGGTTGF 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV++SH+ V +A + E+ +YLH AP+ HI L A+ + HV IP
Sbjct: 173 PKGVMLSHTNFYVGGVANAHELNMQEETIYLHAAPMFHIADLIWFSAVTFMAGTHVVIPM 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F L A+E+H + ++ VP ++ + ++ +T S+++I G + ++
Sbjct: 233 FTPDGTLAAIEKHKPSQVLLVPVMLQMVMQSDKLAQT--DVSSLRQIAYGASPITQSVLV 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAFGNVTPNSVHQPQGV 363
+A FP I A+G TE S + ++ LE P G+L S +P V
Sbjct: 291 DAFKKFPNTSFIQAFGQTELSPIASVLSEEYHVLEGPKAGKL---------RSAGRPTRV 341
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDI 420
C + V+ + VG+I +G ML YW+ KP V+ + W+ TGD
Sbjct: 342 CEVRI---VDANMLEVPRGDVGQITVKGPTTMLGYWN----KPEVTAETIRDGWVLTGDA 394
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +D+ G ++L+ R I SGGENVY EVE + QHP + V+GI + + E V A
Sbjct: 395 GYMDEDGFIFLMDRVKDMIVSGGENVYSAEVENAIGQHPAVATSAVIGIPSEQWGESVHA 454
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V L + ++++ L+ HC + G+K P +PFPL+
Sbjct: 455 LVILHPGIE----------------VTAQALQSHCHTL-IAGYKCPHSIEFTTEPFPLSG 497
Query: 541 TGKIRRDEVRR 551
K+ + E+R+
Sbjct: 498 ANKVLKTELRK 508
>gi|297171535|gb|ADI22533.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
Oceanospirillales bacterium HF0500_09M11]
gi|297182289|gb|ADI18458.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
Oceanospirillales bacterium HF4000_13G19]
Length = 516
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 166/552 (30%), Positives = 258/552 (46%), Gaps = 60/552 (10%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I Q L R + + TI +R + + F V LA GL +G SG+ VAI +LNS+
Sbjct: 3 ISQTLRRAVQQNPDGIATIYKDRKQSWRAFENRVARLAAGLRALGAESGNRVAILSLNSD 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIP 127
YLE+ AV + G + P+N R + E + ++ S ++ V D SD L +
Sbjct: 63 RYLEYFYAVPWAGAALNPVNIRLAPPEIAYSLNDSASSILFVDDAFSD--MLSKLRPLLE 120
Query: 128 SLRWHVSLGSSS-SDFVNKRDMLTA------DILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+++ V +G S D + L A DI +G S + F +T
Sbjct: 121 TVQHVVFMGDGSLPDGCVDYESLIAESDPMRDISEGGSELAGLF-------------YTG 167
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG KGV++SH L+ +L + + YG +Y+H AP+ H+ ++S A+ + G H
Sbjct: 168 GTTGRSKGVMLSHDNLVFNALNVVPEMDYGSGTIYMHAAPMFHLADMASTFAVTLAGGTH 227
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+P+F+ L +E+ VT + VP ++ L + R+K+ SVK++L G +P
Sbjct: 228 GIVPRFDVDDVLSFIERERVTHALLVPTMINLLVSSGRIKEF--DVSSVKRMLYGASAMP 285
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
++ A P A YG TE S +T + P PG G+ ++
Sbjct: 286 ESVLISAMKQMPDALFAQGYGQTEASPIITALP---PDFHVPG------GDKLRSAGRAA 336
Query: 361 QGVCVG-KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDTG 418
GV V +E C VG I RG +VML YW + + ++ G WL TG
Sbjct: 337 LGVEVAIFDKDDIERPRC-----EVGEICARGPNVMLGYWGMEEASAEALRNG--WLHTG 389
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G +D+ G V++V R I SGGEN++ EVE+ + HP + VVGI + E V
Sbjct: 390 DLGYMDEDGFVFIVDRVKDMIISGGENIFSVEVESAIYSHPAVQECAVVGIPHDEWVETV 449
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V R+ +L+ + L HCRE + G+K PR +P P+
Sbjct: 450 HAIVVPRQGH----------------VLTEDELLSHCREL-IAGYKLPRSIEFRSEPLPV 492
Query: 539 TSTGKIRRDEVR 550
+ GKI ++E+R
Sbjct: 493 SGAGKILKNELR 504
>gi|154250610|ref|YP_001411434.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
gi|154154560|gb|ABS61777.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
Length = 520
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 166/561 (29%), Positives = 260/561 (46%), Gaps = 70/561 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q + R AV + TI G R T + V LA L +G+ +GD +A+ ++NS
Sbjct: 2 YLTQSIHRAVAVTSRAAATICGTRTRTWTELHDRVSRLAGALRGLGVGAGDRIALLSMNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE A + ++ P+N RWS E +I +L+ DE+ L ++ A P
Sbjct: 62 DRYLETCFAAWWADAVIVPMNTRWSVAEHVYSIEDAGAALLLMDETFREAGLAVR-DACP 120
Query: 128 SLRWHVSLGSSSS--DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+ V +G ++ ++ +++ A G + R E I +T GTTG
Sbjct: 121 RIAHAVYMGDGAAPETCLSYEELIAAGPAIGDARR--------GGEELAGIFYTGGTTGF 172
Query: 186 PKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV++SH AL SL+ A G+ D YLH AP+ H+ + + A + G HVF+P
Sbjct: 173 PKGVMLSHKALWTSSLSVGAGTAGFNPDMRYLHAAPMFHLADFAMSTATTIYGGSHVFMP 232
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK----TWKGRDSVKKILNGGGGLP 300
FE S L+ +EQH + + VP ++ L + + +WKG + G +P
Sbjct: 233 SFEPASFLKLIEQHRASYALLVPTMIRMLLDCPAMAQHDLSSWKG------LFYGASPMP 286
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP--GQLPQAFGNVTPNSVH 358
L++EA P YG TE + T + LE P G+L A
Sbjct: 287 EALLREALAKLPGVAFTQGYGQTELAPIATLLGPEFHVLEGPNAGKLRSA---------- 336
Query: 359 QPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
G+P VEL+V DG VG + RG + ML YW+ KP + +
Sbjct: 337 -------GRPGLCVELRVVGPDGKELPRGEVGEVAVRGPNTMLGYWN----KPEQTAATL 385
Query: 414 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD G +D+ G +++V R I SGGENV+ EVE ++QH + V+G+
Sbjct: 386 VDGWVMTGDGGYMDEEGFLYIVDRLKDMIVSGGENVFSAEVENAVMQHDAVAECAVIGVP 445
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+ + E V A V +S ++ LS E L HC+ + G+K PR
Sbjct: 446 DPKWGERVHAVV------------VPKSGRH----LSEEELFAHCKAL-IAGYKCPRSAD 488
Query: 531 LWRKPFPLTSTGKIRRDEVRR 551
+ +P P ++ GKI + ++RR
Sbjct: 489 IRHEPLPKSAAGKILKTDLRR 509
>gi|384103622|ref|ZP_10004594.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383838861|gb|EID78223.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 514
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 163/562 (29%), Positives = 258/562 (45%), Gaps = 72/562 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
H+ Q L + + + +T+ G RH T Q + V LA GL E G+ GD V I A NS
Sbjct: 2 HLTQLLHKAVQQQPHQPLTVYGARHRTAGQVAERVARLAGGLREQGVAPGDRVCILAFNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E ++A +IGG+V LN RWS +E + A+ L+ DE +L I
Sbjct: 62 DRYFEAVMATWWIGGVVTLLNCRWSLREVADAVADAGSRCLLVDEDCMPLIADLDGPVI- 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI--ICFTSGTTGS 185
H+ G++ + V D++ + P G + + +T GTTG+
Sbjct: 121 ---VHLGDGTAPAGTVGYEDLIA----------TAPAVEDVRAHGDTLAALIYTGGTTGA 167
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGE----DDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
K + SH +L S A + +GY D L AP+ HI L MA +VG V
Sbjct: 168 AKAAMHSHRSL---STALLGSMGYARSSEPDGATLVMAPVFHIAALLGMMAQTLVGGTLV 224
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGL 299
F +FE L+ + +H VT++ + P ++ L+ ++ D S+ I+ G +
Sbjct: 225 FANRFEPDEVLQLLGRHRVTTMTSTPGML----QLLYTHPSFPAADVTSLTTIVYGAAPM 280
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P ++ A +FP A+ + YGMTET+ +L T G
Sbjct: 281 PEAVLTRAMAAFPNAQFVQGYGMTETA---VIASLLGATHRLGG---------------- 321
Query: 360 PQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
P+ G+ HV++ + + + VG ILTRG ++ML YW++ + G W
Sbjct: 322 PRLKSAGRATLHVQIIIADEDGNEVPRGAVGEILTRGDNIMLGYWNRPEETAAALRGG-W 380
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L TGD+ +DD G +++V R I +GGENVY EVE VL HP ++ V+G+ + +
Sbjct: 381 LHTGDLAYMDDEGYIFIVDRAKDMIITGGENVYSTEVENVLSHHPAVLRCAVIGVPDEQW 440
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A + Q + ++ E +R+H + + L GFKAPR L +
Sbjct: 441 GERVHAII------------VPQPGQT----VAVEEIREHVKTR-LAGFKAPRTIELVQA 483
Query: 535 PFPLTSTGKIRRDEVRREVMSH 556
T+TGKI + +R+ +
Sbjct: 484 -LATTATGKIDKRALRQHTLEQ 504
>gi|326381896|ref|ZP_08203589.1| fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395]
gi|326199322|gb|EGD56503.1| fatty-acid--CoA ligase [Gordonia neofelifaecis NRRL B-59395]
Length = 509
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 259/555 (46%), Gaps = 56/555 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + + TI G+R T Q + + A L +G+R D VAI ALNS
Sbjct: 2 YLTQALHRNVQAQPDQIATICGDRTRTHNQTINRIARFAAALGALGVRPDDRVAILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E ++A A+ ++ P+N RWS E + ++ +LV D++ +L+ +A P
Sbjct: 62 DRYFEVLMATAWADAVMVPVNTRWSVAEIAFSLADAEAGVLVVDDAFSGMVDDLR-SACP 120
Query: 128 SLR--WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+R H +S + D++ +P H + I +T GTTG+
Sbjct: 121 GVRSVIHAGDQASPAGLEEYEDLIA-------RTEPVPDAHRRG-DALAGIFYTGGTTGT 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV++SH L+ +L A +G LH AP+ H+ L+S + +++G HV +P
Sbjct: 173 PKGVMLSHRNLLTSALGSAAAGIWGVRGRMLHVAPMFHLADLASVVGCMLLGGSHVMLPT 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ ++ + +H VT + VP +M L VK D + I+ G + L+
Sbjct: 233 FDPETVCRTIGEHQVTDALLVPTMMQILVDDPHVKDYPT--DCLANIMYGASPISEALLA 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+FP A L AYGMTE S T + D H +
Sbjct: 291 RTRAAFPSAALNQAYGMTELSPVATLLRDEDHD-------------------HPVRRRSA 331
Query: 366 GKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G+ APH ++V DG+ VG I+ G HVML YW++ + + + + W+ TGD
Sbjct: 332 GQAAPHALVRVVDPDGADLPTGSVGEIVCAGDHVMLGYWNR-PEETAAALRDGWMHTGDG 390
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +D+ G V++V R I +GGENVY EVE + +HP + V+GI + R E V A
Sbjct: 391 GYLDEDGYVYVVDRIKDMIITGGENVYSVEVENAIAKHPAVAQCAVIGIPDDRWGERVHA 450
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V L L+ + L H RE ++ G+K PR + + FP++
Sbjct: 451 VVGLMPGQT----------------LTLDELADHVRE-HIAGYKVPRSMSVVEQ-FPMSG 492
Query: 541 TGKIRRDEVRREVMS 555
GKI + E+R + S
Sbjct: 493 AGKILKRELRIQFAS 507
>gi|171315762|ref|ZP_02904994.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171099061|gb|EDT43841.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 512
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 168/556 (30%), Positives = 257/556 (46%), Gaps = 66/556 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L + A V TI R T + + V LAR L G+ +G VA+ ALNS
Sbjct: 2 YLTQSLHKAARENPFGVATIFAQRTTTFSELIDRVARLARALRNQGVSTGHRVAMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y+E+I + G + P+N RWS E + +I +L+ D++ L+ P
Sbjct: 62 DRYVEYIFGTLWAGATLNPVNTRWSIAEIAYSIDDCETEVLLVDDTFIGTVARLRQRC-P 120
Query: 128 SLRWHVSLGSSSSD--FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+R + G + + +N ++ + S+R+ H A I +T GTTGS
Sbjct: 121 RIRTVIYCGDAETPTGMLNYEHLVQTNGPLPDSMRN---GHDLAA-----ILYTGGTTGS 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV++SH+ L+ L+ +A E L APL H+G LS + + A V P
Sbjct: 173 PKGVMLSHTNLVSNVLSSLAATPRPEVKTVLQIAPLFHVGALSFVLQSMTRIATQVIHPG 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ K+AL + +H V + VP ++ L L S++ I+ G + + L++
Sbjct: 233 FDPKAALRDIAKHQVNEIFIVPTMLKVL--LDEPSFAEHEMSSLRNIIYGAAPIDASLLQ 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A P ++ + AYGMTETS LP A +VT P+
Sbjct: 291 SAMERIPSSQFLQAYGMTETSP-------------VSAMLPAAC-HVTGG----PKLKAA 332
Query: 366 GKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---W 414
G+PAP E+++ C G + G I RG VML YW+ KP + + W
Sbjct: 333 GRPAPACEIRIVDLATDVDCLTGIA--GEIAVRGPGVMLGYWN----KPEETAKALRNGW 386
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGDIG +D G +++ R I SGGENVY EVE +L HP + VVGI +
Sbjct: 387 MHTGDIGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQLCAVVGIPDETW 446
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E+V A V LR + E LR HCRE ++ +K PR + +R
Sbjct: 447 GEIVHAIVVLRPGHT----------------VGIEDLRTHCRE-SIASYKCPR-SIEFRS 488
Query: 535 PFPLTSTGKIRRDEVR 550
PL++ GK+ + ++R
Sbjct: 489 ELPLSAAGKLLKYKLR 504
>gi|407695875|ref|YP_006820663.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253213|gb|AFT70320.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 516
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 256/559 (45%), Gaps = 74/559 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I Q L R + + TI +R + + F V LA GL +G SG+ VAI +LNS+
Sbjct: 3 ISQTLRRAVQQNPDGIATIYKDRRRSWRAFENRVARLAAGLRALGAESGNRVAILSLNSD 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIP 127
YLE+ AV + G + P+N R + E + ++ S ++ V D SD L +
Sbjct: 63 RYLEYFYAVPWAGAALNPVNIRLAPPEIAYSLNDSASSILFVDDAFSD--MLSKLRPLLE 120
Query: 128 SLRWHVSLGSSS-SDFVNKRDMLTA------DILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+++ V +G S D + L A DI +G S + F +T
Sbjct: 121 TVQHVVFMGDGSLPDGCVDYESLIAESDPMRDISEGGSELAGLF-------------YTG 167
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG KGV++SH L+ +L + + Y +Y+H AP+ H+ ++S A+ + G H
Sbjct: 168 GTTGRSKGVMLSHDNLVFNALNVVPEMDYASGTIYMHAAPMFHLADMASTFAVTLAGGTH 227
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+P+F+ L +E+ VT + VP ++ L + ++K+ SVK++L G +P
Sbjct: 228 GIVPRFDVDDVLSFIERERVTHALLVPTMINLLVSSGKIKEF--DVSSVKRMLYGASAMP 285
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
++ A P A YG TE S +T + P H P
Sbjct: 286 ESVLISAMKQMPDALFAQGYGQTEASPIITAL---------------------PPDFHVP 324
Query: 361 QG---VCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWD-QFLAKPSVSTG 411
G G+ A VE+ + + VG I RG +VML YW + + ++ G
Sbjct: 325 GGDKLRSAGRAALGVEVAIFDKDDTERPRCEVGEICARGPNVMLGYWGMEEASAEALRNG 384
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
WL TGD+G +D+ G V++V R I SGGEN++ EVE+ + HP + VVGI +
Sbjct: 385 --WLHTGDLGYMDEDGFVFIVDRVKDMIISGGENIFSVEVESAIYSHPAVQECAVVGIPH 442
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
E V A V R+ +L+ E L HCRE + G+K PR
Sbjct: 443 DEWVETVHAIVVPRQGH----------------VLTEEELLSHCREL-IAGYKLPRSIEF 485
Query: 532 WRKPFPLTSTGKIRRDEVR 550
+P P++ GKI ++E+R
Sbjct: 486 RSEPLPISGAGKILKNELR 504
>gi|453070112|ref|ZP_21973364.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452761758|gb|EME20057.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 512
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 170/561 (30%), Positives = 269/561 (47%), Gaps = 72/561 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q + R +V+TI+ R T ++ V + LA GL +GLR+GD VAI A NS
Sbjct: 2 QLTQFVHRSLRASPEAVMTISDGRVRTSRESVDRIKRLAGGLQTLGLRTGDRVAILASNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
++Y E +LA + G + +P+N RWS E A+ +L+ DE+ S L+ A P
Sbjct: 62 DYYHEALLACWWFGAVASPVNSRWSTAEIRYALEDSGSTVLLVDENFASVGSTLRE-ACP 120
Query: 128 SLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
L V G+ D + + + A+ + LR + ++ +T GTTG
Sbjct: 121 GLTTVVYCGNDRVPDGMLDYEQVIAEAIPVDDLRV-------GGDTLALLLYTGGTTGVS 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV+ISH AL+ +L +A G + L PL HI G+ +A ++G VF+P
Sbjct: 174 KGVMISHQALMTSALGTLAAGGVAISNGTNLAVNPLFHIAGIVGWLAQSLMGGTQVFVPN 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-------SVKKILNGGGG 298
F ++ LEAV+++ T++ VP ++ ++ K G D SV+ + G
Sbjct: 234 FSPRTFLEAVDRYRPTTVGLVPTML----QMLVAHKNETGEDATTYDLSSVRILRYGASP 289
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+ L+ + FP + YGMTET+ +++ P G G++ ++
Sbjct: 290 ISPTLLGQVMQMFPNSSFAQGYGMTETA----HISMLSPADHLEG------GDLLRSA-- 337
Query: 359 QPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
G+ PH ELK+ S VG I+T G+HVML YW+ KP S EV
Sbjct: 338 -------GRALPHCELKIVDPAGSELPPGEVGEIVTFGSHVMLGYWN----KPKESA-EV 385
Query: 414 ----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
W+ TGD G +D G +++V R I +GGENVY EVE L QH + V+G+
Sbjct: 386 LRSGWMHTGDAGYLDARGYLFIVDRIKDMIVTGGENVYSTEVENALAQHESVAACSVIGL 445
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+A+ E V A V LR + +++ D+ LR H + + G+K+PR F
Sbjct: 446 PDAQWGERVHAVVVLRHGF---DADADE-------------LRAHVKTL-IAGYKSPRTF 488
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
+ PL++ GK+ + ++R
Sbjct: 489 -QFVDALPLSAAGKVLKRDLR 508
>gi|399988370|ref|YP_006568720.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
gi|399232932|gb|AFP40425.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis str.
MC2 155]
Length = 518
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 262/562 (46%), Gaps = 79/562 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + +T+ G R T + V LA L +G+R+GD VA+ A NS
Sbjct: 2 YLTQGLHRAVQQTPGATMTVFGERRRTFLEVADRVARLAGALRALGVRAGDRVAMLAQNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES--------SDSWYL 119
+ Y E++LAV + G++ P+N RW+ E + ++ ++ D+S D+W
Sbjct: 62 DRYHEYLLAVPWANGVLNPVNIRWTPAEIAYSLEDSGTKVMFVDDSFARMLPAIKDAW-A 120
Query: 120 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
EL T I + G+ + + ++K D + G L L +
Sbjct: 121 ELS-TVIYAGEASPPAGTLAYEELIDKSDPVDDARRGGDELAGL--------------FY 165
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 237
T GTTG PKGV++SH+ L+ + + + + LH AP+ H+ L S A L+ G
Sbjct: 166 TGGTTGFPKGVMLSHANLLTSTYGLLTPGFAFRPGGICLHAAPMFHLADLMSWSAGLLQG 225
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
HVFIP FE + ++A+ QH VT + VP ++ L + + S + +
Sbjct: 226 GRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINRY--DLTSFRALFYAAS 283
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P L++ A FP A+ + YGMTE S T + +P+
Sbjct: 284 AIPQALLERAMKVFPNAEFVQGYGMTELSPLATLL--------------------SPDDH 323
Query: 358 HQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
+P+ + G+ AP E+++ DG+ VG + RG +VML YW+ KP +
Sbjct: 324 QKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----KPQETAA 379
Query: 412 EV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ W+ TGD +DD G +++V R I +GGENVY EVE ++QHP + V+G
Sbjct: 380 AIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVAACAVIG 439
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ +A E V A V L+ + L++ +R+H + + + G+K PR
Sbjct: 440 VPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAGYKCPR- 481
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
+ + PL+ GK+ + E+R
Sbjct: 482 SIEFVNALPLSGAGKVLKRELR 503
>gi|111019998|ref|YP_702970.1| AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
gi|110819528|gb|ABG94812.1| probable AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
Length = 515
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 273/569 (47%), Gaps = 68/569 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + N ++T+ G+R +T + V LA LL +GL GD V + +LNS
Sbjct: 2 YLTQSLHRAVQQRPNQLMTVCGDRVHTSAETGDRVARLAGALLGLGLGVGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E+ A +IGG+V PLN RWS E + A+ + +L+ D++ E++ T P
Sbjct: 62 DRYHEYFFATWWIGGVVNPLNTRWSAAEIAFALEDSQTTVLLVDDTFVPLLDEMR-TLFP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYS--LRSLPFTHSWAPEGAVI--ICFTSGTT 183
SLR V G D T D L GY + + G + I +T GT+
Sbjct: 121 SLRAVVHCG----------DRPTPDGLLGYEDLIATTEAVEDLRMGGDTLAGIFYTGGTS 170
Query: 184 GSPKGVVISHSALIVQSLAKIA----IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
G PKGV+++H+ L+ SL +A V G L +AP+ H+ L+S + G
Sbjct: 171 GRPKGVMLTHANLMTASLGSLAANRTAVAGGR---ALVSAPMFHLAALASWNGQNIAGGI 227
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V +P FE +AL +E+ + S++ VP ++ L L + + S+ I G +
Sbjct: 228 LVTLPSFEPAAALRLIEEQRINSMLLVPTMIQML--LRHPDREIRDLSSITGIQYGASPI 285
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
L++EA +FP+A + YGMTE LT ++ D T +L A
Sbjct: 286 SETLLREAQRTFPRADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA----------- 332
Query: 360 PQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
G+P HVE++V DG VG I+ RG ++M YW++ + + + + W
Sbjct: 333 ------GRPMGHVEVRVVDDGGVELPRGEVGEIIARGGNIMAGYWNR-PEETATALRDGW 385
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L TGD G +D+ G + +V R I SGGENVY EVE L HP ++ V+G+ + R
Sbjct: 386 LYTGDGGYMDEDGYLLVVDRLKDMIISGGENVYSTEVENALASHPDVVHCAVIGVPDDRF 445
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A + ++ L+ E +R H + + + G+KAPR + +
Sbjct: 446 GERVHAFLVMKPGTS----------------LTCEDVRAHTK-RLIAGYKAPRSVTIVEQ 488
Query: 535 PFPLTSTGKIRRDEVRREVMSHLKSLPSN 563
P++ GKI E+RR+ S L P+N
Sbjct: 489 -MPVSPAGKILERELRRQ-FSDLADRPAN 515
>gi|441211311|ref|ZP_20975027.1| feruloyl-CoA synthetase [Mycobacterium smegmatis MKD8]
gi|440626558|gb|ELQ88388.1| feruloyl-CoA synthetase [Mycobacterium smegmatis MKD8]
Length = 518
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 262/562 (46%), Gaps = 79/562 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + +T+ G R T + V LA L +G+R+GD VA+ A NS
Sbjct: 2 YLTQGLHRAVQQTPGATMTVFGERRRTFLEVADRVARLAGALRALGVRAGDRVAMLAQNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES--------SDSWYL 119
+ Y E++LAV + G++ P+N RW+ E + ++ ++ D+S D+W
Sbjct: 62 DRYHEYLLAVPWANGVLNPVNIRWTPAEIAYSLEDSGTKVMFVDDSFARMLPAIKDAW-A 120
Query: 120 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
EL T I + G+ + + ++K D + G L L +
Sbjct: 121 ELS-TVIYAGEASPPAGTLAYEELIDKSDPVDDARRGGDELAGL--------------FY 165
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 237
T GTTG PKGV++SH+ L+ + + + + LH AP+ H+ L S A L+ G
Sbjct: 166 TGGTTGFPKGVMLSHANLLTSTYGLLTPGFAFRPGGICLHAAPMFHLADLMSWSAGLLQG 225
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
HVFIP FE + ++A+ QH VT + VP ++ L + + S + +
Sbjct: 226 GRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINRY--DLTSFRALFYAAS 283
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P L++ A FP A+ + YGMTE S T + +P+
Sbjct: 284 AIPQALLERAMKVFPNAEFVQGYGMTELSPLATLL--------------------SPDDH 323
Query: 358 HQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
+P+ + G+ AP E+++ DG+ VG + RG +VML YW+ KP +
Sbjct: 324 QKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----KPQETAA 379
Query: 412 EV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ W+ TGD +DD G +++V R I +GGENVY EVE ++QHP + V+G
Sbjct: 380 AIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVAACAVIG 439
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ +A E V A V L+ + L++ +R+H + + + G+K PR
Sbjct: 440 VPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAGYKCPR- 481
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
+ + PL+ GK+ + E+R
Sbjct: 482 SIEFVNALPLSGAGKVLKRELR 503
>gi|118468421|ref|YP_888350.1| feruloyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118169708|gb|ABK70604.1| feruloyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 520
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 262/562 (46%), Gaps = 79/562 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + +T+ G R T + V LA L +G+R+GD VA+ A NS
Sbjct: 4 YLTQGLHRAVQQTPGATMTVFGERRRTFLEVADRVARLAGALRALGVRAGDRVAMLAQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES--------SDSWYL 119
+ Y E++LAV + G++ P+N RW+ E + ++ ++ D+S D+W
Sbjct: 64 DRYHEYLLAVPWANGVLNPVNIRWTPAEIAYSLEDSGTKVMFVDDSFARMLPAIKDAW-A 122
Query: 120 ELQHTAIPSLRWHVSLGS-SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
EL T I + G+ + + ++K D + G L L +
Sbjct: 123 ELS-TVIYAGEASPPAGTLAYEELIDKSDPVDDARRGGDELAGL--------------FY 167
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 237
T GTTG PKGV++SH+ L+ + + + + LH AP+ H+ L S A L+ G
Sbjct: 168 TGGTTGFPKGVMLSHANLLTSTYGLLTPGFAFRPGGICLHAAPMFHLADLMSWSAGLLQG 227
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
HVFIP FE + ++A+ QH VT + VP ++ L + + S + +
Sbjct: 228 GRHVFIPSFEPVTVMQAIAQHQVTDALLVPTMIQKLIDHPDINRY--DLTSFRALFYAAS 285
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P L++ A FP A+ + YGMTE S T + +P+
Sbjct: 286 AIPQALLERAMKVFPNAEFVQGYGMTELSPLATLL--------------------SPDDH 325
Query: 358 HQPQGV-CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
+P+ + G+ AP E+++ DG+ VG + RG +VML YW+ KP +
Sbjct: 326 QKPRLLRSAGRAAPSAEVRIVDPDGNEVPRRTVGEVAVRGGNVMLGYWN----KPQETAA 381
Query: 412 EV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ W+ TGD +DD G +++V R I +GGENVY EVE ++QHP + V+G
Sbjct: 382 AIRDGWMHTGDAAYMDDDGYIYVVDRIKDMIITGGENVYSAEVENAVVQHPSVAACAVIG 441
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ +A E V A V L+ + L++ +R+H + + + G+K PR
Sbjct: 442 VPDADWGERVHAVVVLQPGAE----------------LAACQIREHAK-RLIAGYKCPR- 483
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
+ + PL+ GK+ + E+R
Sbjct: 484 SIEFVNALPLSGAGKVLKRELR 505
>gi|418047004|ref|ZP_12685092.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353192674|gb|EHB58178.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 519
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 165/557 (29%), Positives = 257/557 (46%), Gaps = 69/557 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R A + +T+ G R NT V LA +G R GD +A+ +LNS
Sbjct: 6 YLTQGLHRAARATPHDPMTVCGGRVNTFAGIADRVARLAGAFQSLGARDGDRIAMLSLNS 65
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E++LA + G +V P+N RWS E + ++ ML+ D++ EL+ A
Sbjct: 66 DRYHEYLLATPWAGAVVNPINIRWSAAEIAYSLRDSDTRMLLIDDTFLPLLPELRSNASD 125
Query: 128 -SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ H G + ++ D++ A +P H + A I +T GT+G P
Sbjct: 126 LATVIHCGDGPALDGTLDYEDLVAA-------AEPVPDAHRSGSDLAGIF-YTGGTSGHP 177
Query: 187 KGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV+++H L+ +L +A + LH AP+ H+ L+ +A + G HVF+P
Sbjct: 178 KGVMLTHDNLMTSALGSLASGFFLTSGGPLLHAAPMFHLADLAIWLAQVSRGGTHVFVPA 237
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F LEA+ +H +T L+ VP ++ L + S++ ++ GG + + L++
Sbjct: 238 FRPDWVLEALHEHRITDLLLVPTMVQMLVDHPSLSD--HDTSSLRMVMYGGSPIAAALLE 295
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMT---LYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
A P A + AYGMTE S T ++ +DP L G
Sbjct: 296 RAAARLPTASFVQAYGMTEVSPVATLLSPQDHHDPVLRRSG------------------- 336
Query: 363 VCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---W 414
G+ APH E+++ D + VG I+ RG HVM YW KP + + W
Sbjct: 337 ---GQAAPHSEVRIVGDDDTELPRGEVGEIVVRGGHVMAGYW----GKPEETAAALRSGW 389
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD G +D+ G +++V R I SGGENVY EVE L +HP + V+GI + R
Sbjct: 390 MHTGDAGYMDERGYIFVVDRLKDMIVSGGENVYSVEVENALARHPAVATCAVIGIPDDRW 449
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG-FKAPRLFVLWR 533
E V A V Q + + E LR+ C K+L G +K PR F
Sbjct: 450 GERVHAVVVF---------AAGQRADHDE-------LREFC--KSLIGTYKVPRSFEAV- 490
Query: 534 KPFPLTSTGKIRRDEVR 550
P ++ GK+ + E+R
Sbjct: 491 DALPTSAAGKVLKRELR 507
>gi|365872522|ref|ZP_09412059.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|414580929|ref|ZP_11438069.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1215]
gi|420880463|ref|ZP_15343830.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0304]
gi|420886271|ref|ZP_15349631.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0421]
gi|420890605|ref|ZP_15353952.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0422]
gi|420895102|ref|ZP_15358441.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0708]
gi|420900440|ref|ZP_15363771.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0817]
gi|420907863|ref|ZP_15371181.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1212]
gi|420974296|ref|ZP_15437487.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0921]
gi|421051638|ref|ZP_15514632.1| feruloyl-CoA synthetase [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|363993205|gb|EHM14430.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|392077865|gb|EIU03692.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0422]
gi|392082034|gb|EIU07860.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0421]
gi|392085372|gb|EIU11197.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0304]
gi|392094414|gb|EIU20209.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0708]
gi|392097801|gb|EIU23595.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0817]
gi|392105767|gb|EIU31553.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1212]
gi|392116081|gb|EIU41849.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-1215]
gi|392162179|gb|EIU87869.1| feruloyl-CoA synthetase [Mycobacterium abscessus 5S-0921]
gi|392240241|gb|EIV65734.1| feruloyl-CoA synthetase [Mycobacterium massiliense CCUG 48898]
Length = 515
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 256/553 (46%), Gaps = 57/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
Q L R + ++TI R +T +QF V LA GL G+R GD V + +LNS
Sbjct: 2 QFTQWLHRALQQYPDRLITIDQGREHTVEQFADRVARLAAGLRANGVRPGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAI 126
+ Y+E++ AV ++G + +N RWS E ++ S V+LV D + A
Sbjct: 62 DRYVEYLTAVPWLGAALNAVNIRWSLAEIGYSLRESGTRVLLVDDTFKAAAAPLRAACAC 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTGS 185
+ G + D + D+L A P + +++ + +T GTTG+
Sbjct: 122 LETVIYCGPGPAPQDMIGYEDLLAA---------HEPIDDTRTGGDSLLGVFYTGGTTGN 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A + G+ HV +P
Sbjct: 173 PKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGNLSGSTHVIVP 232
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F + L+A+ H V ++ VP ++ L + ++ I G + ++
Sbjct: 233 SFTPQEVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITYGASVISEAVL 290
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 291 QRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA---------------- 332
Query: 365 VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+ APH E+++ + V G ++ +G +VML YW + + + + + W+ TGD
Sbjct: 333 -GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAAIRDGWMHTGD 390
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
G +DD G V++V R + +GGENVY EVE L +HP + V+GI + + E V
Sbjct: 391 AGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGIPDEQWGERVH 450
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V Q CD L++HCRE ++ +K PR F + PL+
Sbjct: 451 AVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSFEFVDE-LPLS 492
Query: 540 STGKIRRDEVRRE 552
GKI + +R++
Sbjct: 493 GAGKILKRVLRQK 505
>gi|430807645|ref|ZP_19434760.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
gi|429500076|gb|EKZ98462.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
Length = 518
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 252/558 (45%), Gaps = 68/558 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + V TI R T ++F + V LA L ++G+ GD V++ ALNS
Sbjct: 2 YLTQGLHRRMQQTPDHVATIFRGRRRTYREFSERVSRLAGALQQLGMNPGDRVSMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ + V + GG++ P+N RWS E ++ +L+ D+ S + TA
Sbjct: 62 DRYLEYAMGVWWGGGVLNPVNTRWSVPEIVYSLDDCDTGILIVDDHFLSMAEPIHATAKR 121
Query: 128 S-LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ + H G+ + + +L ++R E I +T GTTG P
Sbjct: 122 APILIHAGDGAPPAGMLGFEALLADSPSVPDAMR--------GGEDLASIMYTGGTTGKP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV+ SH L S++++A E + LH APL H ++ A+ + ++G H +P F
Sbjct: 174 KGVMQSHLNLWSSSISRLAQFPLDEATITLHAAPLFHTAAMAKAVGVFVIGGTHTMVPTF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ LE +E+ V ++ VP ++ A L + S+K+I G + ++
Sbjct: 234 DPAEVLETLERERVNDIMLVPTMLQ--AILACPDFARRDVSSLKRINYGASPINGAVLDA 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC-- 364
A + P + AYG+TE S ++ V P + H P+G
Sbjct: 292 ALAAMPNVEFSHAYGLTEASPVVS---------------------VNPPANHGPEGRASG 330
Query: 365 ----VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV-- 413
G+P V +KV V G I+ RG ++M YW+ KP + +
Sbjct: 331 LYRSAGRPGFGVFVKVVDPNGDEVPRNTIGEIVVRGPNIMQGYWN----KPEETRQALRN 386
Query: 414 -WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WL TGD +DD G +++V R I +GGENVY EVE L QHP + V+G+ +
Sbjct: 387 GWLHTGDGAYMDDAGYLFIVDRIKDMIVTGGENVYSAEVENALAQHPAVHSCAVIGVPHE 446
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
R E V A V LR Q E LR HCR + +K P+ V +
Sbjct: 447 RWGEAVHAVVVLRPGLQAGEDE----------------LRTHCRAL-IASYKCPK-SVEF 488
Query: 533 RKPFPLTSTGKIRRDEVR 550
R PL++ GKI + E+R
Sbjct: 489 RTEMPLSAAGKILKRELR 506
>gi|397680719|ref|YP_006522254.1| long-chain-fatty-acid--CoA ligase [Mycobacterium massiliense str.
GO 06]
gi|418251010|ref|ZP_12877212.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
47J26]
gi|420954176|ref|ZP_15417418.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|420958351|ref|ZP_15421585.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
gi|420963308|ref|ZP_15426532.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|420994292|ref|ZP_15457438.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|421000069|ref|ZP_15463204.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|421004591|ref|ZP_15467713.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|353449200|gb|EHB97598.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
47J26]
gi|392153089|gb|EIU78796.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|392178851|gb|EIV04504.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|392180394|gb|EIV06046.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|392193294|gb|EIV18918.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|392246221|gb|EIV71698.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|392248077|gb|EIV73553.1| feruloyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
gi|395458984|gb|AFN64647.1| Long-chain-fatty-acid--CoA ligase [Mycobacterium massiliense str.
GO 06]
Length = 515
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 256/553 (46%), Gaps = 57/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
Q L R + ++TI R +T +QF V LA GL G+R GD V + +LNS
Sbjct: 2 QFTQWLHRALQQYPDRLITIDQGREHTVEQFADRVARLAAGLRANGVRPGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAI 126
+ Y+E++ AV ++G + +N RWS E ++ S V+LV D + A
Sbjct: 62 DRYVEYLTAVPWLGAALNAVNIRWSLAEIGYSLRESGTRVLLVDDTFKAAAAPLRAACAC 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTGS 185
+ G + D + D+L A P + +++ + +T GTTG+
Sbjct: 122 LETVIYCGPGPAPQDMIGYEDLLAA---------HEPIDDTRTGGDSLLGVFYTGGTTGN 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A + G+ HV +P
Sbjct: 173 PKGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGNLSGSTHVIVP 232
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F + L+A+ H V ++ VP ++ L + ++ I G + ++
Sbjct: 233 SFTPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITYGASVISEAVL 290
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+ AT FP A+ AYGMTE S T + D + P L A
Sbjct: 291 QRATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA---------------- 332
Query: 365 VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+ APH E+++ + V G ++ +G +VML YW + + + + + W+ TGD
Sbjct: 333 -GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAAIRDGWMHTGD 390
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
G +DD G V++V R + +GGENVY EVE L +HP + V+GI + + E V
Sbjct: 391 AGRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGIPDEQWGERVH 450
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V Q CD L++HCRE ++ +K PR F + PL+
Sbjct: 451 AVV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSFEFVDE-LPLS 492
Query: 540 STGKIRRDEVRRE 552
GKI + +R++
Sbjct: 493 GAGKILKRVLRQK 505
>gi|359424226|ref|ZP_09215348.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358240500|dbj|GAB04930.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 515
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 269/569 (47%), Gaps = 92/569 (16%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ Q L R A K + + +I R T Q+ + V +A GL +G++ D VAI A NS+
Sbjct: 6 LTQALHRSAQQKPDELYSICAGRTFTHQEALDRVSRIAGGLCALGVKPEDKVAILAQNSD 65
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH---TA 125
YL+ ILA A+ ++ P+N RW+ E + ++ +L+ D++ ++EL H +
Sbjct: 66 LYLQCILATAWADALIVPVNTRWNRAEIADSLDEAGVGVLIVDDA----FVELGHLLVSD 121
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI---------- 175
+P + V G+ G S+ LP A +G VI
Sbjct: 122 VPGIAALVYAGA------------------GESVDGLPSIDQMATDGPVIADAHRCGDQP 163
Query: 176 --ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM 233
+ +T GTTG +GVV+SH+A++ +L A+ G + V + +APL H+ S +A
Sbjct: 164 LGLFYTGGTTGRSRGVVLSHNAVVTSALGFAAMRTIGTESVCMVSAPLFHLAQFSGWVAA 223
Query: 234 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
+VGA V +P F+ + + ++ H +T + VP ++ A L K S++ ++
Sbjct: 224 ALVGATQVVLPAFDPVAVMRLIQDHRITRAVLVPTMLH--AVLNHPKAGDFDLSSLETVV 281
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA-FGNV 352
GG + + A P A + YGMTE ++ +T + LP+ G++
Sbjct: 282 YGGSPIAQATLDHAREFLPAAGFLQVYGMTEMAAVVTTL------------LPEDHVGDL 329
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKP 406
T ++ G+ APH ++V GS VG ++ +GA++M YW +P
Sbjct: 330 TKSA---------GRAAPHALIRVLDPGSGRELPIGSVGEVVVQGANMMTEYW----RRP 376
Query: 407 SVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
+ G + WL TGD G +D+ G +++V R I SGGENVY EVE + +HP +
Sbjct: 377 EETAGVIRGGWLHTGDAGYLDERGYLFIVDRVKDMIVSGGENVYSVEVENAVAKHPAVSQ 436
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
+ V+G+ + + E V A V LR E+ L L+ CR+ + G+
Sbjct: 437 VAVIGVPDDKWGERVHAIVVLR----------------PEMSLELGELQNSCRQ-TIAGY 479
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K PR + P++ GKI + ++R+E
Sbjct: 480 KCPRSMTVVDS-LPISPAGKILKRDLRKE 507
>gi|420866096|ref|ZP_15329485.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0303]
gi|420870891|ref|ZP_15334273.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RA]
gi|420875337|ref|ZP_15338713.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RB]
gi|420988058|ref|ZP_15451214.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0206]
gi|421040590|ref|ZP_15503598.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-R]
gi|421045689|ref|ZP_15508689.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-S]
gi|392064812|gb|EIT90661.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0303]
gi|392066812|gb|EIT92660.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RB]
gi|392070361|gb|EIT96208.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0726-RA]
gi|392182337|gb|EIV07988.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0206]
gi|392221518|gb|EIV47041.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-R]
gi|392235142|gb|EIV60640.1| feruloyl-CoA synthetase [Mycobacterium abscessus 4S-0116-S]
Length = 515
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/552 (27%), Positives = 256/552 (46%), Gaps = 55/552 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
Q L R + ++TI R +T +QF V L+ GL G+R GD V + +LNS
Sbjct: 2 QFTQWLHRALQQYPDRLITIDQGREHTVEQFADRVARLSAGLRANGVRPGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAI 126
+ Y+E++ AV ++G + +N RWS E ++ S V+LV D + A
Sbjct: 62 DRYIEYLTAVPWLGAALNAVNIRWSLAEIGYSLRESGTRVLLVDDTFKAAAAPLRAACAC 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ G + D + D+L S + T + + + + +T GTTG+P
Sbjct: 122 LETVIYCGAGPAPQDMIGYEDLLA-------SHEPIDDTRTGG-DSLLGVFYTGGTTGNP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A + G+ HV +P
Sbjct: 174 KGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGNLSGSTHVIVPS 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F + L+A+ H V ++ VP ++ L + ++ I G + +++
Sbjct: 234 FSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITYGASVISEAVLQ 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
AT FP A+ AYGMTE S T + D + P L A
Sbjct: 292 RATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA----------------- 332
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G+ APH E+++ + V G ++ +G +VML YW + + + + + W+ TGD
Sbjct: 333 GRAAPHCEVRIVDPNDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAAIRDGWMHTGDA 391
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +DD G V++V R + +GGENVY EVE L +HP + V+GI + + E V A
Sbjct: 392 GRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGIPDEQWGERVHA 451
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V Q CD L++HCRE ++ +K PR F + PL+
Sbjct: 452 VV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSFEFVDE-LPLSG 493
Query: 541 TGKIRRDEVRRE 552
GKI + +R++
Sbjct: 494 AGKILKRVLRQK 505
>gi|169631633|ref|YP_001705282.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
ATCC 19977]
gi|419708247|ref|ZP_14235717.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M93]
gi|420912220|ref|ZP_15375532.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-R]
gi|420918674|ref|ZP_15381977.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-S]
gi|420923844|ref|ZP_15387140.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-S]
gi|420929503|ref|ZP_15392782.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-1108]
gi|420933809|ref|ZP_15397082.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-151-0930]
gi|420936357|ref|ZP_15399626.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-152-0914]
gi|420944068|ref|ZP_15407323.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-153-0915]
gi|420949493|ref|ZP_15412742.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-154-0310]
gi|420969190|ref|ZP_15432393.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0810-R]
gi|420979841|ref|ZP_15443018.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0212]
gi|420985226|ref|ZP_15448393.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-R]
gi|421010288|ref|ZP_15473397.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0119-R]
gi|421015396|ref|ZP_15478470.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-R]
gi|421020490|ref|ZP_15483546.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-S]
gi|421025231|ref|ZP_15488274.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0731]
gi|421030972|ref|ZP_15494002.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-R]
gi|421036476|ref|ZP_15499493.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-S]
gi|169243600|emb|CAM64628.1| Putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus]
gi|382944279|gb|EIC68587.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M93]
gi|392111565|gb|EIU37335.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-S]
gi|392114214|gb|EIU39983.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0125-R]
gi|392126491|gb|EIU52242.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-1108]
gi|392128497|gb|EIU54247.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-S]
gi|392132221|gb|EIU57966.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-151-0930]
gi|392141872|gb|EIU67597.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-152-0914]
gi|392145674|gb|EIU71398.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-153-0915]
gi|392150534|gb|EIU76247.1| feruloyl-CoA synthetase [Mycobacterium massiliense 1S-154-0310]
gi|392164119|gb|EIU89808.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0212]
gi|392170222|gb|EIU95900.1| feruloyl-CoA synthetase [Mycobacterium abscessus 6G-0728-R]
gi|392195894|gb|EIV21513.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0119-R]
gi|392196031|gb|EIV21649.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-R]
gi|392206213|gb|EIV31796.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0122-S]
gi|392208754|gb|EIV34326.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0731]
gi|392218854|gb|EIV44379.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-R]
gi|392220328|gb|EIV45852.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0930-S]
gi|392244846|gb|EIV70324.1| feruloyl-CoA synthetase [Mycobacterium abscessus 3A-0810-R]
Length = 515
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/552 (27%), Positives = 256/552 (46%), Gaps = 55/552 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
Q L R + ++TI R +T +QF V L+ GL G+R GD V + +LNS
Sbjct: 2 QFTQWLHRALQQYPDRLITIDQGREHTVEQFADRVARLSAGLRANGVRPGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAI 126
+ Y+E++ AV ++G + +N RWS E ++ S V+LV D + A
Sbjct: 62 DRYIEYLTAVPWLGAALNAVNIRWSLAEIGYSLRESGTRVLLVDDTFKAAAAPLRAACAC 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ G + D + D+L S + T + + + + +T GTTG+P
Sbjct: 122 LETVIYCGAGPAPQDMIGYEDLLA-------SHEPIDDTRTGG-DSLLGVFYTGGTTGNP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A + G+ HV +P
Sbjct: 174 KGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGNLSGSTHVIVPS 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F + L+A+ H V ++ VP ++ L + ++ I G + +++
Sbjct: 234 FSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITYGASVISEAVLQ 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
AT FP A+ AYGMTE S T + D + P L A
Sbjct: 292 RATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA----------------- 332
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G+ APH E+++ + V G ++ +G +VML YW + + + + + W+ TGD
Sbjct: 333 GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAAIRDGWMHTGDA 391
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +DD G V++V R + +GGENVY EVE L +HP + V+GI + + E V A
Sbjct: 392 GRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGIPDEQWGERVHA 451
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V Q CD L++HCRE ++ +K PR F + PL+
Sbjct: 452 VV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSFEFVDE-LPLSG 493
Query: 541 TGKIRRDEVRRE 552
GKI + +R++
Sbjct: 494 AGKILKRVLRQK 505
>gi|407642609|ref|YP_006806368.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia brasiliensis ATCC 700358]
gi|407305493|gb|AFT99393.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia brasiliensis ATCC 700358]
Length = 515
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 258/561 (45%), Gaps = 73/561 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + V+T+ G+R T + + A L E+G+R GD V I ALNS
Sbjct: 2 YLTQSLHRTLQQDPDRVLTVFGDRVRTVAESADRIARFAGALAELGVRRGDRVGILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E++ AV ++G V P+N RWS E S ++ +L+ D++ + +L+ P
Sbjct: 62 DRYYEYLYAVPWLGAAVNPVNIRWSPAEISYSLRESDTRVLLVDDAFAALIPQLRQE-FP 120
Query: 128 SLRWHVSLGSS-SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
L + G + DF + L AD + T + E A + +T GTTG P
Sbjct: 121 GLTTVIFCGDGPTPDFALNYETLVAD------HEPVADTRTGGDELAGVF-YTGGTTGHP 173
Query: 187 KGVVISHSALIVQSLAKIA----IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
KGV++SH +I+ +L A + YG LH AP+ H+ ++ +A +V A HVF
Sbjct: 174 KGVMLSHDNMIISALGSCAVGDFVTPYG---TVLHVAPMFHLADIAMWVAGNLVNASHVF 230
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+P F L+A+ H VT+++ VP ++ L V V+ + G +
Sbjct: 231 VPMFTPGGVLQAIGAHGVTNMLLVPTMIQLLVDDPAVADF--DLSGVRTVTYGASPISEA 288
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLY---DPTLETPGQLPQAFGNVTPNSVHQ 359
++ A FP A AYGMTE + T + DP L
Sbjct: 289 VLGRARKVFPMAGFTQAYGMTELAPVATLLGPAEHDDPVLRR------------------ 330
Query: 360 PQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV- 413
G+ PHVE+++ + VG ++ RG +VML YW+ +P + V
Sbjct: 331 ----SAGRATPHVEVRIVDADDNEVPRGEVGEVVVRGDNVMLGYWN----RPEDTAAAVR 382
Query: 414 --WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD G +D+ G V++V R I +GGENVY EVE L H + V+G+ +
Sbjct: 383 DGWMHTGDGGRMDEHGYVFIVDRLKDMIITGGENVYSAEVENALAAHAAVASCAVIGVPD 442
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
E V A V L Q +E E LR HC+ + G+KAPR V
Sbjct: 443 DEWGERVHAVVVLLPGAQAAE----------------EELRAHCKSL-IAGYKAPRT-VE 484
Query: 532 WRKPFPLTSTGKIRRDEVRRE 552
+ + P++ GKI + E+RR+
Sbjct: 485 FAEALPVSGAGKILKRELRRK 505
>gi|419716292|ref|ZP_14243690.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M94]
gi|382941498|gb|EIC65817.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
M94]
Length = 515
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 153/552 (27%), Positives = 256/552 (46%), Gaps = 55/552 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
Q L R + ++TI R +T +QF V L+ GL G+R GD V + +LNS
Sbjct: 2 QFTQWLHRALQQYPDRLITIDQGREHTVEQFADRVARLSAGLRANGVRPGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAI 126
+ Y+E++ AV ++G + +N RWS E ++ S V+LV D + A
Sbjct: 62 DRYIEYLTAVPWLGAALNAVNIRWSLAEIGYSLRESGTRVLLVDDTFKVAAAPLRAACAC 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ G + D + D+L S + T + + + + +T GTTG+P
Sbjct: 122 LETVIYCGAGPAPQDMIGYEDLLA-------SHEPIDDTRTGG-DSLLGVFYTGGTTGNP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A + G+ HV +P
Sbjct: 174 KGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGNLSGSTHVIVPS 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F + L+A+ H V ++ VP ++ L + ++ I G + +++
Sbjct: 234 FSPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITYGASVISEAVLQ 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
AT FP A+ AYGMTE S T + D + P L A
Sbjct: 292 RATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA----------------- 332
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G+ APH E+++ + V G ++ +G +VML YW + + + + + W+ TGD
Sbjct: 333 GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPEESAAAIRDGWMHTGDA 391
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +DD G V++V R + +GGENVY EVE L +HP + V+GI + + E V A
Sbjct: 392 GRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGIPDEQWGERVHA 451
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V Q CD L++HCRE ++ +K PR F + PL+
Sbjct: 452 VV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSFEFVDE-LPLSG 493
Query: 541 TGKIRRDEVRRE 552
GKI + +R++
Sbjct: 494 AGKILKRVLRQK 505
>gi|398866041|ref|ZP_10621544.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398241940|gb|EJN27576.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 522
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 253/553 (45%), Gaps = 52/553 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I Q L R + ++ R + + V LA L ++GL SGD VA+ + NS
Sbjct: 2 YITQGLHRHMQQRPDATAIRYQGRSLSFAALGERVARLAGALKKLGLASGDCVAMLSRNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y+E+ L V + G++ P+N RWS E ++ +L+ D++ + + A
Sbjct: 62 QRYIEYSLGVPWADGVLNPVNTRWSVVEIVYSLDDSNSTILIVDDAFSNMGAMIARQA-K 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
++R + G D ML+ + L + S + + I +T GTTG PK
Sbjct: 121 TIRHVIYAG----DQETPEGMLSYEALLAEAEAVEDVRRSG--DALLGIFYTGGTTGFPK 174
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFE 247
GV+IS L +LA ++ YG + +LH P+ H+ AML+ G HV +P F
Sbjct: 175 GVMISQDNLAFAALASLSKGFYGSESKFLHAMPMFHLADFGGMSAMLICGGTHVVLPAFS 234
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMK 305
++ALE + Q VT + P ++ + K D ++K I+ G + L+
Sbjct: 235 GEAALELISQEGVTDAMLAPTMIQMMLDARDAKPALNALDLSAIKNIIYGASPISPVLLN 294
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG--V 363
A +F A+ YGMTE ++ T + + E HQ G
Sbjct: 295 RACEAFTTARFFQGYGMTELTTGGTMLDAQYHSAE-----------------HQASGKMY 337
Query: 364 CVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
G+ VEL++ D VG I+ RG +VML YW+ A V + W+ TG
Sbjct: 338 SAGRAISCVELRIVDDEDREVPRGTVGEIVVRGPNVMLGYWNNPDATAQV-LKDGWMHTG 396
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D +D+ G V++V R I SGGEN+Y EVE L HP + V+GI + E V
Sbjct: 397 DGAYMDEEGFVYIVDRLKDMIVSGGENIYSAEVENALASHPAVAQSAVIGIPCEKWGETV 456
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A + L+ + +++ E + HCR + + G+K PR V +R+ PL
Sbjct: 457 HAVIVLK----------------PQAVVTEEEIVAHCRAR-IAGYKCPR-SVEFRQAMPL 498
Query: 539 TSTGKIRRDEVRR 551
++ GKI ++E+R+
Sbjct: 499 STVGKILKNELRQ 511
>gi|388566015|ref|ZP_10152492.1| long-chain-fatty-acid CoA ligase [Hydrogenophaga sp. PBC]
gi|388266745|gb|EIK92258.1| long-chain-fatty-acid CoA ligase [Hydrogenophaga sp. PBC]
Length = 517
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 256/560 (45%), Gaps = 75/560 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ Q L+R + TI NR + + + V LA GL +GL+ G+ +A+ A NS+
Sbjct: 3 LTQALTRAVQTRHRFPATIYQNRQRSWAEVGERVPRLAAGLRALGLQPGERLAVLAFNSD 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
Y+E A A+ ++ PLN RW+ E ++ LV D+ + +P
Sbjct: 63 NYIELFFAAAWANLVIVPLNTRWAIPENVYSLKDAGCAGLVVDDGFAA--------QVPQ 114
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYS---LRSLPFTHSWAPEGAVI-ICFTSGTTG 184
L G + V+ D T + G+ + P + + I +T GTTG
Sbjct: 115 LL----EGHPMAHVVHMGDQPTPAGMHGHEALIAHTPPMADECGRDDDLCGIYYTGGTTG 170
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV++SH I S+ IA + + + Y+H+A L H+ G S A A+ + G HV +P
Sbjct: 171 HPKGVMLSHKNFIAASINWIATLHFSDQTRYMHSAGLFHLAGASPAFALTLAGGTHVCLP 230
Query: 245 KFESKSALEAVEQHCVTSLITVPA---IMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
KF++ A EA++ H V ++ VP +M + R T SV+ G +P
Sbjct: 231 KFDAVLAFEAIQTHQVNYVLFVPTMINMMLNHPDFDRYDLT-----SVRYCEYGASPIPD 285
Query: 302 ELMKEATNSFPKAKLISAYGMTETSS---SLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
++ A + P + I YGMTET++ SL + +D G P+ H
Sbjct: 286 AVLAAAIDKLPSWEFIQGYGMTETAALTVSLPWRYHFD-------------GEHGPHKRH 332
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
G+ A V++++ + G I RGA VML YW+ KP + +
Sbjct: 333 -----AAGRAAYGVDVRIVDPDGKELPRGTPGEIAVRGAQVMLGYWN----KPEATAAAI 383
Query: 414 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD +D+ G + +V R I SGGEN+Y EVE + HP + V+G+
Sbjct: 384 RDGWMHTGDGAWMDEDGFITIVDRVKDMIISGGENIYSREVENAVHAHPAVRECAVIGVP 443
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+ + E V+A V L++ QS +E++ HCR + + +K PR V
Sbjct: 444 DEKWGEAVMAVVALKDG---------QSVSEQEII-------DHCR-RLIANYKCPRR-V 485
Query: 531 LWRKPFPLTSTGKIRRDEVR 550
+R+ PL+ GKI ++ +R
Sbjct: 486 EFREALPLSGAGKIMKNVLR 505
>gi|398951912|ref|ZP_10674415.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398155734|gb|EJM44169.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 519
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/549 (29%), Positives = 256/549 (46%), Gaps = 49/549 (8%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q L R ++TI G+R T +QFV+ V LA L E+G++SGD VA+ LNS
Sbjct: 2 YFTQPLHRNLQCAPERLMTIYGDRSRTLRQFVERVARLAGALRELGVQSGDCVAMLGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ AV + ++ N RWS +E + A+T + +L+ DE+ L L +P
Sbjct: 62 DRYLEYCFAVPWADAVLNLCNTRWSAEENAYALTDSQTSVLLVDETFKDIGLRLSRQ-VP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTGSP 186
SLR + +G D ML + L R+ P + +++ + +T GTTG P
Sbjct: 121 SLRHVIYVG----DGTTPDGMLDYETLIA---RASPMEDARRGGDSLLGVFYTGGTTGFP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV+ISH+A +A D V L AP+ H+ +S+ ++ GA HV +P F
Sbjct: 174 KGVMISHTAFWSSQIALDVEGLVPPDSVMLRAAPMFHLADMSTGYVGVLEGATHVILPAF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ A+ A+++H + + VP ++ L V S++ ++ G + + +
Sbjct: 234 QPAEAMAAIQRHGIQVAMLVPTMIQLLINHPEVDD--YDLSSLQHLVYGASPIQEQTLWS 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
P+ +L AYG TE S ++L P T G
Sbjct: 292 LQAMLPQLQLFQAYGQTEMSP---IVSLLGPAQHTAEAAAAGMLR------------SCG 336
Query: 367 KPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
+ VE+K+ D V G I+ RG + M Y ++ S G+ WL TGD
Sbjct: 337 RATRAVEVKIVDDDGREVPRGSIGEIVVRGPNAMSGYLNKPEQTLSALPGDGWLRTGDGA 396
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+D+ G +++V R I +GGENV+ EVE L HP I V+GI + + E V A
Sbjct: 397 RMDENGYIFIVDRLKDMIVTGGENVFSAEVENALCSHPDIAMCAVIGIPSEQWGEAVHAV 456
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V L+ + N E L++ HC+ + + G+KAP+ V +R PL+
Sbjct: 457 VVLKPG----------TEPNGEELIA------HCK-RQIAGYKAPK-SVEFRAALPLSGA 498
Query: 542 GKIRRDEVR 550
GK+ + E+R
Sbjct: 499 GKVLKSELR 507
>gi|419961754|ref|ZP_14477757.1| AMP-binding acyl-CoA synthetase [Rhodococcus opacus M213]
gi|414572778|gb|EKT83468.1| AMP-binding acyl-CoA synthetase [Rhodococcus opacus M213]
Length = 515
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 269/555 (48%), Gaps = 61/555 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + N +T+ G+R +T + V LA LL +GL GD V + +LNS
Sbjct: 2 YLTQSLHRAVQQRPNQPMTVCGDRIHTSSETGDRVARLAGALLGLGLGVGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E+ A +IGG+V PLN RWS E + A+ + +L+ D++ E++ T P
Sbjct: 62 DRYHEYFFATWWIGGVVNPLNTRWSAAEIAFALEDSQTTVLLVDDTFVPLLDEMR-TLFP 120
Query: 128 SLRWHVSLGSS-SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
SLR V G + D + + + L A LR + I +T GT+G P
Sbjct: 121 SLRAVVHCGDQPTPDGLLRYEDLVATAEPVEDLRV-------GGDTLAGIFYTGGTSGRP 173
Query: 187 KGVVISHSALIVQSLAKIA----IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
KGV+++H L+ SL +A V G L +AP+ H+ L+S + G V
Sbjct: 174 KGVMLTHLNLMTASLGSLAANHTAVAGGR---ALLSAPMFHLAALASWNGQNIAGGILVM 230
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+P FE +AL +E+ + S++ VP ++ L L ++ + S+ I G +
Sbjct: 231 LPSFEPAAALRLIEEQRINSMLLVPTMIQML--LRHPEREIRDLSSITAIQYGASPISET 288
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
L+++A +FPKA + YGMTE LT ++ D T +L A
Sbjct: 289 LLRQAQRAFPKADFVQGYGMTEAGPGLTSLSADDHHAAT--RLNSA-------------- 332
Query: 363 VCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
G+P HVEL+V D + VG I+ RG ++M YW++ + + + + WL T
Sbjct: 333 ---GRPMGHVELRVVDDRGNELPRGEVGEIIARGGNIMTGYWNR-PEETAAALRDGWLYT 388
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G +D+ G +++V R I SGGENVY EVE L HP ++ V+G+ + R E
Sbjct: 389 GDGGYMDEDGYLFVVDRLKDMIISGGENVYSTEVENALASHPDVVQCAVIGVPDDRFGER 448
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A + ++ + CD +R H + K + G+K+PR + + P
Sbjct: 449 VHAFLVMKPG---TSLTCDD-------------VRAHAK-KLIAGYKSPRSITIVEQ-MP 490
Query: 538 LTSTGKIRRDEVRRE 552
++ GKI + E+RR+
Sbjct: 491 VSPAGKILKRELRRQ 505
>gi|426408982|ref|YP_007029081.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
gi|426267199|gb|AFY19276.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
Length = 507
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 258/558 (46%), Gaps = 66/558 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ QCL R + + T+ G+R T +QF V LA L +G+ +GD V + ALNS
Sbjct: 2 YMTQCLQRTLQQNPDQLATVFGDRRRTYRQFGDRVARLAGALQNLGMAAGDRVGMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+I+ V + GG++ P+N RWS E ++ +L+ DE +++ +A
Sbjct: 62 DRYLEYIMGVWWGGGVLNPVNIRWSVPEIVYSLDDCSTGILIVDEHFAPLAEQIRRSARH 121
Query: 128 SLRW------HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+ R+ V +G + + R D+ +G E I +T G
Sbjct: 122 APRFIYAGEGKVPVGMLGFEQLIARTAPVEDVGRG-------------GEDLACIMYTGG 168
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV+ SH L + ++ + D LH APL H+ G++ A+ M G HV
Sbjct: 169 TTGFPKGVMQSHLNLWSACMPRMVDMPPIRDGRLLHVAPLFHVAGMARALIQFMAGESHV 228
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ F++ L+ +E+ +T + VP ++ LA L S+K++ G
Sbjct: 229 LLSSFDAAQVLQVIERERITETLLVPTMI--LALLAHPDFDRHDLSSLKRLTYGASPSAG 286
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E++++ P +L +YG+TE ++ LP N TP +
Sbjct: 287 EMVEQVLARLPDLELSHSYGLTEACPVVS------------SNLP---CNHTPQARKSGL 331
Query: 362 GVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFLAKPSVSTGEV--- 413
VG+ V +K+ V R I+ RG ++M YW+ KP + +
Sbjct: 332 SRSVGRGGLGVNVKIVDPQGQEVARGTVGEIIVRGPNIMQGYWN----KPEETAKALRDG 387
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL TGD +D+ G +++V R I SGGENVY EVE +L +HP + V+G+ + +
Sbjct: 388 WLFTGDGAYMDEQGYLFIVDRLKDMIVSGGENVYSAEVENILARHPAVALCAVIGVPHEQ 447
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A V + Q + +E LR++CRE + +K P+ V +R
Sbjct: 448 WGEAVHAVVVRKPGAQ----------------VDAEQLRRYCRE-FIAPYKCPKT-VEFR 489
Query: 534 KPFPLTSTGKIRRDEVRR 551
PL++ GK+ + E+R+
Sbjct: 490 DELPLSAAGKVLKRELRQ 507
>gi|296164101|ref|ZP_06846720.1| feruloyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295900541|gb|EFG79928.1| feruloyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 517
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 162/557 (29%), Positives = 263/557 (47%), Gaps = 65/557 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + TI +R T Q Q + LA L IG+ GD V + ALNS
Sbjct: 2 YLTQGLHRALQQHPDRLATIDADRTRTYAQSAQRIAKLASALRTIGVNRGDRVGMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E++LAV + ++ P+N RWS E + A+ + +L D++ L+ + P
Sbjct: 62 DRYHEYLLAVPWADAVLNPINIRWSPPEIAYALRDSQTDVLFVDDAFSPAVPALR-ASYP 120
Query: 128 SLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
LR V G++ + + + + L A G +R + + + +T GTTG P
Sbjct: 121 DLRAVVHCGNAPTPEGMFCYEELIAGGEVGDDVRR-------SGDQLAGVFYTGGTTGLP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDV-YLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH+ L+ L +++ + + LH APL H+ L++ +G HV +
Sbjct: 174 KGVMLSHANLMTSVLGMLSVGSFLSSEARLLHVAPLFHLADLAAWAGQTTLGGTHVMLST 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
FE + L+ +E+H VT ++ VP ++ + V+ S++ ++ G + ++
Sbjct: 234 FEPSAILQTIERHQVTDVLLVPTMLQMVVDHPAVRD--YDLSSLRNVMYGASPISEAVLS 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A + A+ + YGMTE S T + D E P L A
Sbjct: 292 RAMKTVRSARFMQGYGMTELSPLATVLRPEDH--EHPDLLRSA----------------- 332
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDT 417
G+ AP E+K+ V G I+ RG +VML YW+ KP + + W+ T
Sbjct: 333 GRAAPCAEVKIVDADDKEVPPGNTGEIVVRGGNVMLGYWN----KPDETAAALRNGWMHT 388
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G +D+ G V++V R I SGGENVY EVE VL +HP + V+G+A+ E
Sbjct: 389 GDAGYMDERGYVFVVDRIKDMIISGGENVYSTEVENVLSRHPEVAACAVIGVADENWGER 448
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL--FVLWRKP 535
V A V L E+ +++E LR C+ + + G+KAPR FV
Sbjct: 449 VHAVVVLTENSS----------------VTAEELRDFCKTQ-IAGYKAPRTASFV---DA 488
Query: 536 FPLTSTGKIRRDEVRRE 552
PL+ GK+ + E+R++
Sbjct: 489 LPLSGAGKVLKRELRKQ 505
>gi|94314746|ref|YP_587955.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93358598|gb|ABF12686.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 518
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 255/563 (45%), Gaps = 78/563 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + V TI +R T ++F + V LA L ++G+ GD V++ +LNS
Sbjct: 2 YLTQGLHRRVQQTPDHVATIFRSRRRTYREFSERVSRLAGALQQLGMNPGDRVSMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ ++V + GG++ P+N RWS E ++ +L+ D+ + ++ TA
Sbjct: 62 DRYLEYAMSVWWGGGVLNPVNTRWSVPEIVYSLDDCDTGILIVDDHFLAMAEPIRATAKR 121
Query: 128 S-LRWHVSLGSSSSDFVNKRDMLT-----ADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+ + H G+ + + +L D ++G E I +T G
Sbjct: 122 APILIHAGDGAPPAGMLGFEALLADASPVPDAMRGG-------------EDLASIMYTGG 168
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV+ SH L S++++A E + LH APL H ++ A+ + ++G H
Sbjct: 169 TTGKPKGVMQSHLNLWSSSISRLAQFPLDEATITLHAAPLFHTAAMAKAVGVFVIGGTHT 228
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+P F+ LE +E+ V ++ VP ++ A L + S+K+I G +
Sbjct: 229 MVPTFDPAEVLETLERERVNDIMLVPTMLQ--AILACPDFARRDVSSLKRINYGASPING 286
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
++ A + P + AYG+TE S ++ V P + H P
Sbjct: 287 AVLDAALAAMPNVEFSHAYGLTEASPVVS---------------------VNPPANHGPV 325
Query: 362 GVC------VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 410
G G+P V +KV V G I+ RG ++M YW+ KP +
Sbjct: 326 GRASGLYRSAGRPGFGVFVKVVDPNGDEVPRNTIGEIIVRGPNIMQGYWN----KPEETR 381
Query: 411 GEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
+ WL TGD +DD G +++V R I +GGENVY EVE L QHP + V+
Sbjct: 382 QALRNGWLHTGDGAYMDDAGYLFIVDRIKDMIVTGGENVYSAEVENALAQHPAVHSCAVI 441
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + R E V A V LR Q E LR HCR + +K P+
Sbjct: 442 GVPHERWGEAVHAVVVLRPGLQAGEDE----------------LRTHCRAL-IASYKCPK 484
Query: 528 LFVLWRKPFPLTSTGKIRRDEVR 550
V +R PL++ GKI + ++R
Sbjct: 485 -SVEFRTELPLSAAGKILKRDLR 506
>gi|374366830|ref|ZP_09624904.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
gi|373101697|gb|EHP42744.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
Length = 519
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 162/555 (29%), Positives = 258/555 (46%), Gaps = 59/555 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + G R + +Q + V LA GL ++G++SGD VA+ +LNS
Sbjct: 2 YLTQALHRAVQQHPERIAVRYGERQRSFRQLAERVARLAGGLRKLGMQSGDRVAMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ +LE+ +AV + GG++ P N RWS E ++ +L+ DE+ + ++L+ A
Sbjct: 62 DRFLEYQMAVPWAGGVLNPCNTRWSAAEILYSLDDSGSTILLVDETFRALAVQLRRDAA- 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP------EGAVIICFTSG 181
+LR + G D + GY +L + P E I +T G
Sbjct: 121 TLRELIYCG----------DGEVPSGMHGYE--ALLANAAPVPDAVRRDEDLAGIFYTGG 168
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV++SH+ L LA A YLH AP+ H+ + AM M G H
Sbjct: 169 TTGFPKGVMLSHANLCASGLALRAEGLATPGGTYLHAAPMFHLADMGLAMPQWMEGNTHA 228
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
IP F + L+ +E+ VT ++ VP ++ + +KK + +++ I+ G +
Sbjct: 229 IIPAFNPELVLDTLERDRVTHMLLVPTMIQMMVDHPAMKKP-RDLSALQAIIYGASPISE 287
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
+++ A + P + AYGMTE S T + T E Q G +
Sbjct: 288 AVLERAMAALPGVGFVQAYGMTELSPLATINPAWYHTAEGRAQ-----GKLR-------- 334
Query: 362 GVCVGKPAPHVELKV-----CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ + E+++ C VG + RG VM YW++ A+ + + + W+
Sbjct: 335 --AAGRASYTSEVRIVDGEGCEVPRGTVGEVAVRGPTVMQGYWNK-PAENAAAVRDGWMH 391
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD G +D+ G +++V R I SGGENVY EVE L QHP ++ V+G+ +A E
Sbjct: 392 TGDGGYMDEDGFIFIVDRLKDMIVSGGENVYSAEVENALAQHPAVVASAVIGVPSAEWGE 451
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A V R S+ EL+ HC+ + G+K PR V +R
Sbjct: 452 AVHAVVVGRPG---------TSATAGELI-------DHCKTL-IAGYKCPR-SVEFRDAL 493
Query: 537 PLTSTGKIRRDEVRR 551
PL+ GKI + E+R+
Sbjct: 494 PLSGAGKILKIELRK 508
>gi|398865680|ref|ZP_10621194.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398242784|gb|EJN28390.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 519
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 256/553 (46%), Gaps = 55/553 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q L R ++TI G+R T +QFV+ V LA L E+G++SGD VA+ LNS
Sbjct: 2 YFTQPLHRNLQCAPERLMTIYGDRSRTLRQFVERVARLAGALRELGVKSGDCVAMLGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ AV + ++ N RWS +E + A+T + +L+ DE+ L L +P
Sbjct: 62 DRYLEYCFAVPWADAVLNLCNTRWSAEENAYALTDSQTSVLLVDETFKDIGLRLSRQ-VP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYS---LRSLPFTHSWAPEGAVI-ICFTSGTT 183
SLR + +G D T D + Y ++ P + +++ + +T GTT
Sbjct: 121 SLRHVIYVG----------DGTTPDAMLDYEALIAQASPMEDARRGGDSLLGVFYTGGTT 170
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G PKGV+ISH+A +A D V L AP+ H+ +S+ ++ GA HV +
Sbjct: 171 GFPKGVMISHTAFWSSQIALDVEGLVPPDSVMLRAAPMFHLADMSTGYVGVLEGATHVIL 230
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F+ A+ A++ H + + VP ++ L V S++ ++ G + +
Sbjct: 231 PAFQPVEAMAAIQCHGIQVAMLVPTMIQLLINHPEVDN--YDLSSLQHLVYGASPIQEQT 288
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ P+ +L AYG TE S ++L P TP
Sbjct: 289 LWSLQAMLPQLQLFQAYGQTEMSP---IVSLLGPAQHTPAAAAAGILR------------ 333
Query: 364 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
G+ VE+K+ D V G I+ RG + M Y ++ + G+ WL TG
Sbjct: 334 SCGRATRAVEVKIVDDDGREVPRGSIGEIVVRGPNAMSGYLNKPEQTLAALPGDGWLRTG 393
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D +D+ G +++V R I +GGENV+ EVE L HP I V+GI + + E V
Sbjct: 394 DGARMDENGYIFIVDRLKDMIVTGGENVFSAEVENALCSHPDIAMCAVIGIPSEQWGEAV 453
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V L+ + N E L++ HC+ + + G+KAP+ V +R PL
Sbjct: 454 HAVVVLKPG----------AEPNGEELIA------HCK-RQIAGYKAPK-SVEFRAALPL 495
Query: 539 TSTGKIRRDEVRR 551
+ GK+ + E+R
Sbjct: 496 SGAGKVLKSELRE 508
>gi|254488273|ref|ZP_05101478.1| acyl-CoA synthase [Roseobacter sp. GAI101]
gi|214045142|gb|EEB85780.1| acyl-CoA synthase [Roseobacter sp. GAI101]
Length = 534
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 241/527 (45%), Gaps = 44/527 (8%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
Q + V +A L ++G++ GD VA LNS W +E + + IG I P+N+R S +E
Sbjct: 32 QMNRRVHAIAWQLEKLGVKPGDRVAYLGLNSHWIVEIYVVPSMIGAISVPINHRLSVEEM 91
Query: 97 SRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV--SLGSSSSDFVNKRDMLTADIL 154
I P +L+ D +L PSL+ + + D + I
Sbjct: 92 VGVIGDATPAILIFDRHFHEQAADLL-AQCPSLQTLILADWDQPADDLPDGTLHYDTLIA 150
Query: 155 KGYSLRSLPFTHSWA-PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ ++ F S + + +I+ +TSGTTG PKGV++SHS +V + + GY +DD
Sbjct: 151 EAPAVADNAFDESASRSDDTMILFYTSGTTGQPKGVMLSHSNFLVNATGSGHLYGYRQDD 210
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
V L + PL H+G S L G V PKFE L +E +T++ VP ++ +
Sbjct: 211 VLLLSGPLFHLGTGSRVFTALAYGTTMVVQPKFEVVDTLRMIEAQKITTMTMVPTMLNMV 270
Query: 274 ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
R + S++ + G +P LM+ A + P YG+TETS L+
Sbjct: 271 MNHPRFPEF--DFSSIRVLTYGASPMPVTLMERAIAAIPGITFCQGYGLTETSPVLS--- 325
Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRIL 388
LE +P GN + + VG+P + +L++ + V G I+
Sbjct: 326 ----VLEPADHIP---GNPMLDKLS-----TVGRPILYSDLRIVDADDNPVPTGTPGEIV 373
Query: 389 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG VM YW++ G + TGD G +D G + + GR I SGGENVYP
Sbjct: 374 VRGPQVMNGYWNRPQETAHAMRGG-FFHTGDAGVMDADGYLTIAGRTKEMIISGGENVYP 432
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E E L +HP + V G+ +A+ EMV A V L + SE
Sbjct: 433 IETENALSKHPAVAQAAVFGVPHAKWGEMVYAAVALHDGKPASEDE-------------- 478
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
L CRE+ + +KAPR +W+ P PL++T K+ + ++ +V++
Sbjct: 479 --LIAFCRER-IAHYKAPRGMTIWQGPLPLSATNKLDKMTIKAQVLA 522
>gi|226361776|ref|YP_002779554.1| fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226240261|dbj|BAH50609.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 506
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 261/554 (47%), Gaps = 60/554 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
H+ Q L R + ++V TI G+R T + V LA GL +G + D +A+ ALNS
Sbjct: 2 HLTQPLHRNRQQRPDTVATICGDRSLTHTETYDRVAALAGGLRGLGTDTDDRIALLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YL+ ILAVA+ ++ P+N RWS KE + ++ +L D++ + ELQ P
Sbjct: 62 DRYLQIILAVAWADAVIVPVNTRWSVKEIAYSLDEAGVRVLFLDDAFVALAAELQ-ALCP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTGSP 186
L + G + ML + L + S P + A+ I +T GTTG P
Sbjct: 121 HLTTVIHCGEGPT----PDGMLAFETL---ATESTPVPDARRRGDALAGIFYTGGTTGFP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV++SH L + A + LH AP+ H+ L+S + +++G HV IP F
Sbjct: 174 KGVMLSHRNLFASATGCAATGAWSTAGRALHAAPMFHLADLASVIGHMLLGGTHVMIPAF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L A+ H VT + VP ++ T+ + S++ I+ G + L+
Sbjct: 234 DPVTTLTAIADHGVTDALLVPTMIQ--MTVDHPRLAEFDLSSLRHIMYGASPISESLLDR 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A +FP AK + YGMTE + + L+D P + A G
Sbjct: 292 ARTAFPSAKFLQGYGMTELAPVASL--LHDEDHHHPIRRRSA-----------------G 332
Query: 367 KPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
+ APH +K+ DG+ H G I+ G HVML YW+ KP + + W+ TG
Sbjct: 333 RAAPHTLIKIVDPDGNEVPRGHFGEIIVTGDHVMLGYWN----KPDETAAALRNGWMHTG 388
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D G++D G V++ R I SGGENVY EVE VL +HP + V+ + + R E V
Sbjct: 389 DGGTMDGDGYVFVADRIKDMIISGGENVYSIEVENVLAKHPAVTQCAVIAVPDDRWGERV 448
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V L+ L+ + LR+H + + + G+K PR + FP+
Sbjct: 449 HAVVTLKPGTT----------------LTLDELREHSK-REIAGYKVPRSLEIVDS-FPM 490
Query: 539 TSTGKIRRDEVRRE 552
+ GKI + E+R++
Sbjct: 491 SGAGKILKRELRKQ 504
>gi|426409208|ref|YP_007029307.1| long-chain-fatty-acid--CoA ligase [Pseudomonas sp. UW4]
gi|426267425|gb|AFY19502.1| long-chain-fatty-acid--CoA ligase [Pseudomonas sp. UW4]
Length = 519
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 256/553 (46%), Gaps = 55/553 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q L R ++TI G+R T QQFV+ V LA L E+G++SGD VA+ LNS
Sbjct: 2 YFTQPLHRNLQCAPERLMTIYGDRSRTLQQFVERVARLAGALRELGVQSGDCVAMLGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ AV + ++ N RWS +E + A+T + +L+ DE+ L L +P
Sbjct: 62 DRYLEYCFAVPWADAVLNLCNTRWSAEENAYALTDSQTSVLLVDETFKDIGLRLSRQ-VP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSL---RSLPFTHSWAPEGAVI-ICFTSGTT 183
SLR + +G D T D + Y ++ P + +++ + +T GTT
Sbjct: 121 SLRHVIYVG----------DGTTPDAMLDYETLIAQASPMEDARRGGDSLLGVFYTGGTT 170
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G PKGV+ISH+A +A D V L AP+ H+ +S+ ++ GA HV +
Sbjct: 171 GFPKGVMISHTAFWSSQIALDVEGLVPPDSVMLRAAPMFHLADMSTGYVGVLEGATHVIL 230
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F+ A+ A+++H + + VP ++ L V S++ ++ G + +
Sbjct: 231 PAFQPAEAMAAIQRHGIQVAMLVPTMIQLLINHPEVGN--YDLSSLQHLVYGASPIQEQT 288
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ P+ +L AYG TE S ++L P T
Sbjct: 289 LWSLQAILPQLQLFQAYGQTEMSP---IVSLLGPAQHTAAAAAAGMLR------------ 333
Query: 364 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
G+ VE+K+ D V G I+ RG + M Y ++ + G+ WL TG
Sbjct: 334 SCGRATRAVEVKIVDDDGREVPRGSIGEIVVRGPNAMSGYLNKPEQTLAALPGDGWLRTG 393
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D +D+ G +++V R I +GGENV+ EVE L HP I V+GI + + E V
Sbjct: 394 DGARMDENGYIFIVDRLKDMIVTGGENVFSAEVENALCSHPDIAMCAVIGIPSEQWGEAV 453
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V L+ + N E L++ HC+ + + G+KAP+ V +R PL
Sbjct: 454 HAVVVLKPG----------TEPNGEELIA------HCK-RQIAGYKAPK-SVEFRAALPL 495
Query: 539 TSTGKIRRDEVRR 551
+ GK+ + E+R
Sbjct: 496 SGAGKVLKSELRE 508
>gi|407697759|ref|YP_006822547.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255097|gb|AFT72204.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 518
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 249/554 (44%), Gaps = 58/554 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I Q L R + RN I G+ T + V LA L E G++ GD V + LNS
Sbjct: 2 NITQGLRRAQQINRNGTAIIEGDLTRTWAEVGDRVARLAGALGEYGVKPGDRVVVLMLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
YLE LA A+ G ++ PLN RWS +E + A+ +L D + + EL +
Sbjct: 62 ARYLELYLACAWSGAVIVPLNIRWSTRENALALEDCGARLLFVDAAFEPSARELADGGMA 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTGSP 186
G+S + ++ +L+ + P + + I +T GTTG
Sbjct: 122 ITVVWADDGASPTGLLDYETLLS---------EAAPVADVMCDQNDLAGIFYTGGTTGRS 172
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV++SH L+ + +A + VYLH AP+ H+ ++ + L+ G +V IP F
Sbjct: 173 KGVMLSHGNLVANAFNALAEGLFPRGSVYLHAAPMFHLANGAAMYSQLLSGGANVIIPGF 232
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
++ AVE+H VT ++ VP ++ L V SV+++L G + ++
Sbjct: 233 SPEALTAAVERHGVTDMLLVPTMIQMLVDSEAVVSA--DLSSVRRVLYGASPISEAVLDR 290
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A P A + YGMTE S TF P + G +H+ G
Sbjct: 291 ALARLPDAGFVQLYGMTELSPIATF---------NPPE--NHLGEARERGLHK----AAG 335
Query: 367 KPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDT 417
+ VE+++ D ++ VG ++ RG +M YW+ +P TG+ W+ T
Sbjct: 336 RATLGVEVRIVGDDNNELPPGQVGEVVVRGDTLMQGYWN----RPE-ETGKAIVDGWMHT 390
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G +D G +++V R I SGGENVY EVE + +HP + V+GI + E
Sbjct: 391 GDGGYLDADGYLFVVDRVKDMIISGGENVYSVEVENTIAEHPAVAQCAVIGIPDDHWGEA 450
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V K E + E++ C+ + + G+K PR + +P P
Sbjct: 451 VHAVVL---------------PKPGEAIGGDELI-TFCKAR-IAGYKCPRSVEVRDQPLP 493
Query: 538 LTSTGKIRRDEVRR 551
++ GKI + E+RR
Sbjct: 494 MSGAGKILKTELRR 507
>gi|379708192|ref|YP_005263397.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia cyriacigeorgica GUH-2]
gi|374845691|emb|CCF62757.1| putative 4-coumarate--CoA ligase 2 (4CL 2) (4-coumaroyl-CoA
synthase 2) [Nocardia cyriacigeorgica GUH-2]
Length = 515
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 260/560 (46%), Gaps = 71/560 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + TI G+R T + V LA L +G++ G+ V I ALNS
Sbjct: 2 YLTQSLHRALQQRPGDIATICGDRVRTVAESADRVARLAGALQALGVQRGERVGILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E+ LAV ++G + P+N RWS E ++ +L+ D++ ++ A
Sbjct: 62 DRYHEYYLAVPWLGAVANPVNIRWSVAEIVYSLQDSDTTVLLVDDAFAPMIAPIR-AAFD 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
LR + +G D D L ++L G+ +P T + + + + +T GTTG P
Sbjct: 121 RLRTVIFIG----DGQTPPDALAYEELLAGHD--PVPDTRTGG-DTLLGVFYTGGTTGHP 173
Query: 187 KGVVISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
KGV++SH L+ +L ++ ++ G LH AP+ H+ + + A HVF+
Sbjct: 174 KGVMLSHDNLVTSALGSLSTGHVLSRGGR--LLHAAPMFHLADFALWTCGNLADATHVFV 231
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F LEA+ +H VT + VP ++ L SV+ ++ G + +
Sbjct: 232 PAFTPAGVLEAIARHRVTDALLVPTMIQMLVD--DPAAASHDLSSVRHLVYGASPISEAV 289
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYD---PTLETPGQLPQAFGNVTPNSVHQP 360
++ A +FP A AYGMTE S T ++ D P L
Sbjct: 290 LERAMATFPDAGFTQAYGMTELSPIATLLSPADHLRPELRR------------------- 330
Query: 361 QGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV-- 413
G+ APHVE+++ + + VG ++ RG +VML YW+ KP + +
Sbjct: 331 ---SAGRAAPHVEVRIVDETGTEVPRGEVGEVVARGDNVMLGYWN----KPEATAEAIRD 383
Query: 414 -WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD G +D+ G V++V R I +GGENVY EVE + HP + V+G+ +
Sbjct: 384 GWMHTGDGGRMDEQGYVFIVDRIKDMIITGGENVYSVEVENAVAAHPSVAACAVIGVPDD 443
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A + L+ + +++ +R+HC+ + +K PR V +
Sbjct: 444 QWGERVHAVIVLQPGAELDDND----------------VREHCKSL-IANYKIPR-SVAF 485
Query: 533 RKPFPLTSTGKIRRDEVRRE 552
P++ GKI + E+R+E
Sbjct: 486 VDALPVSGAGKILKRELRKE 505
>gi|398952615|ref|ZP_10674890.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398154925|gb|EJM43385.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 507
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/558 (28%), Positives = 258/558 (46%), Gaps = 66/558 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ QCL R + + T+ G+R T +QF V LA L +G+ +GD V + ALNS
Sbjct: 2 YMTQCLQRTLQQNPDQLATVFGDRRRTYRQFGDRVARLAGALQSLGMAAGDRVGMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+I+ V + GG++ P+N RWS E ++ +L+ DE +++ +A
Sbjct: 62 DRYLEYIMGVWWSGGVLNPVNIRWSVPEIVYSLDDCSTGILIVDEHFAPLAEKIRISARH 121
Query: 128 SLRW------HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+ R+ V +G + + + D +G E I +T G
Sbjct: 122 APRFIYAGEGEVPVGMLGFEQLIAQATPVEDAGRG-------------GEDLACIMYTGG 168
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV+ SH L + ++ + D LH APL H+ G++ A+ M G HV
Sbjct: 169 TTGFPKGVMQSHLNLWSACMPRMVDMPPIRDGRLLHVAPLFHVAGMARALIQFMAGESHV 228
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ F++ L+ +E+ +T + VP ++ LA L S+K++ G
Sbjct: 229 LLSSFDAAQVLQVIERERITETLLVPTMI--LALLAHPDFDRHDLGSLKRLTYGASPSAG 286
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E++++ P +L +YG+TE ++ LP N TP +
Sbjct: 287 EMVEQVLARLPDLELSHSYGLTEACPVVS------------SNLP---CNHTPQARKSGL 331
Query: 362 GVCVGKPAPHVELKVCSDGSSHVGR-----ILTRGAHVMLRYWDQFLAKPSVSTGEV--- 413
VG+ V +K+ V R I+ RG ++M YW+ KP + +
Sbjct: 332 SRSVGRGGLGVNVKIVDPQGQEVARGTVGEIIVRGPNIMQGYWN----KPEETARALRDG 387
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL TGD +D+ G +++V R I SGGENVY EVE VL +HP + V+G+A+ +
Sbjct: 388 WLYTGDAAWMDEQGYLFIVDRLKDMIVSGGENVYSAEVENVLARHPAVALCAVIGVAHEQ 447
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A V + Q + +E LR++CRE + +K P+ V +R
Sbjct: 448 WGEAVHAVVVRKPGAQ----------------VDAEQLRRYCRE-FIAPYKCPKT-VEFR 489
Query: 534 KPFPLTSTGKIRRDEVRR 551
PL++ GK+ + E+R+
Sbjct: 490 DELPLSAAGKVLKRELRQ 507
>gi|120404947|ref|YP_954776.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119957765|gb|ABM14770.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 524
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 257/554 (46%), Gaps = 58/554 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R ++ +TI G R T V LA G +G GD +AI +LNS
Sbjct: 6 YLTQGLHRSLRATPDATMTICGERVRTFADVGDRVSRLAGGFRSLGASPGDRIAILSLNS 65
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E +LA + G + P+N RWS E + A+ +L+ D++ EL+ P
Sbjct: 66 DRYQESLLATVWSGCVTNPVNIRWSAAEIAYALRDSDSRILLIDDAFLPMLPELRRE-FP 124
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
L + G D V + L + L G S S + V +T GT+G PK
Sbjct: 125 GLGDVIHCG----DGVAPPECLAFEDLLGVSDPVTDAHRSGSDLAGVF--YTGGTSGHPK 178
Query: 188 GVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
GV+++H L+ ++ +A + LH AP+ H+ L+ + ++ G HVFIP F
Sbjct: 179 GVMLTHDNLMTSAMGALASGFFLTSGGPLLHAAPMFHLADLAIWLEQVIRGGTHVFIPSF 238
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLAT--LIRVKKTWKGRDSVKKILNGGGGLPSELM 304
+ + L+A+++H V+ L+ VP ++ L + V T +++ ++ GG + + L+
Sbjct: 239 KPEGVLDALQRHRVSDLLLVPTMVQMLVDHPALPVYDT----SALQMVMYGGSPIAAALL 294
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYD---PTLETPGQLPQAFGNVTPNSVHQPQ 361
+ A+ P A + AYGMTE S T ++ D P L G
Sbjct: 295 ERASKRLPTASFVQAYGMTEVSPIATLLSPRDHDDPVLRRSG------------------ 336
Query: 362 GVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G APH E+++ + VG I RG HVM YW + + G W+
Sbjct: 337 ----GVAAPHSEVRIVDEDDVEVPRGDVGEITVRGGHVMAGYWGRPEDTATALRGG-WMH 391
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD G +D+ G V++V R I SGGENVY EVE L +HP + V+G+ + R E
Sbjct: 392 TGDAGYMDERGYVFVVDRIKDMIVSGGENVYSVEVENALARHPAVAACAVIGVPDERWGE 451
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A V +E D ++N L E LR+ CR + G+K PR V
Sbjct: 452 RVHAVV-----VPSAEGGAD--ARN----LDPEELREFCRSL-IGGYKVPRT-VEVVAAL 498
Query: 537 PLTSTGKIRRDEVR 550
PL++ GK+ + E+R
Sbjct: 499 PLSAAGKVLKRELR 512
>gi|119478013|ref|ZP_01618113.1| putative long-chain-fatty-acid CoA ligase [marine gamma
proteobacterium HTCC2143]
gi|119448926|gb|EAW30168.1| putative long-chain-fatty-acid CoA ligase [marine gamma
proteobacterium HTCC2143]
Length = 517
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 245/548 (44%), Gaps = 60/548 (10%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L R A + R + T +R + Q + V LA GL L D +AI +LNS+ Y E
Sbjct: 8 LERGARINRTATATRFLDRERSWSQVLNRVSRLAAGLSGYNLEEADRIAILSLNSDNYFE 67
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRA-ITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
I AV + G + PLN RW+ E A + S V+L D D L + SL+
Sbjct: 68 SIFAVPWAGFCLVPLNTRWALPENQYALVDSGSKVLLFDDAFIDQ--ARLLKDQVDSLQQ 125
Query: 132 HVSLGSSSS-DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
V +G + + D+ + + L A R + I +T GTTG PKGV+
Sbjct: 126 LVYMGDNETPDWADSYEELVAQHQPAQMSRR-------GDDDMAGIFYTGGTTGFPKGVM 178
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKS 250
SH A+ ++ VG + YLH AP+ H+ + +M L+ G H F+ F++
Sbjct: 179 QSHKAIWASAIGMFPSVGMNQTHCYLHAAPMFHMADFAGSMNTLLAGGSHAFVAGFDAGL 238
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+ VT + VPA++ L K R ++KI G +P+ L+ +A
Sbjct: 239 VLKIFSDWKVTHTLIVPAMVKMLLAHPDAGKADLSR--LEKITYGASPMPAALLSDAMRL 296
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+P+ AYG TE + +T + D + G++ ++ G+P P
Sbjct: 297 WPQVGFTQAYGQTEMAPVITTLNAED---------HRKGGDILKSA---------GRPTP 338
Query: 371 HVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGS 422
E+++ + V G ++ +G H ML YW+ KP + + W+ TGD G
Sbjct: 339 VSEVRLLDSDDNDVELGVQGEVVVKGPHAMLGYWN----KPDETAKALVDGWVYTGDAGI 394
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
D G +++V R I +GGENV+ EVE L+ H + + V+GI + EMV V
Sbjct: 395 FDASGYLYIVDRVKDMIITGGENVFTTEVENALISHDAVQDVAVIGIPHDEWGEMVHGIV 454
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
L + SE+ L HCR K++ G+K P+ +P PL+ G
Sbjct: 455 ILVAGMEVSEA----------------ALIGHCR-KSIAGYKCPKSISFREQPLPLSGAG 497
Query: 543 KIRRDEVR 550
K+ + E+R
Sbjct: 498 KVLKTELR 505
>gi|229489261|ref|ZP_04383127.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
gi|229324765|gb|EEN90520.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
Length = 510
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 163/560 (29%), Positives = 267/560 (47%), Gaps = 75/560 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q + R + +T+ G+R + ++ V+ + LA G+ +GL+ GD VAI ALNS
Sbjct: 2 QLTQFVHRSMRQAPETPMTVFGDRVRSCRESVERITKLAGGMQAMGLQPGDRVAILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+WY E ++A + G + +P+N RWS E + A+ L+ D++ S + L+ + P
Sbjct: 62 DWYHEALIACWWSGAVASPVNTRWSPAEITYALEDSGSTFLLVDDNFASIAIALRESC-P 120
Query: 128 SL-------RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
SL V G + V AD+ G + ++ +T
Sbjct: 121 SLATVIYCGEGQVPEGMLDYELVISESTPVADLRVG-------------GDALALLLYTG 167
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
GTTG PKGV++SH +LI +L +A V L PL HI G+ +A ++G
Sbjct: 168 GTTGVPKGVMVSHQSLITSALGTLAAGSVAVSGGVNLAVNPLFHIAGIVGWLAQSLMGGT 227
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
VF+ +F LEAV++H T++ VP ++ L + KT SV+ + G +
Sbjct: 228 QVFLSRFSPGVFLEAVDRHRPTTVGLVPTMLQMLIS--HENKTSYDLTSVRVLRYGASPI 285
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
L+ + + FP + YGMTET + ++ ++ D LE G+L ++ G +
Sbjct: 286 SPTLLGQVMHMFPNSAFAQGYGMTET-AHISVLSPAD-HLEG-GELLRSAGRIL------ 336
Query: 360 PQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV- 413
PH E+++ + +G I+T G+H+ML YW+ KP+ T EV
Sbjct: 337 ----------PHCEVRIVDPAGTELPPGEIGEIVTFGSHIMLGYWN----KPT-ETAEVL 381
Query: 414 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD G +D+ G +++V R I +GGENVY EVE L +H + V+G+
Sbjct: 382 RDGWMHTGDAGYLDERGYLFIVDRIKDMIVTGGENVYSTEVENALARHESVAACSVIGLP 441
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
++R E V A V LR +ES D ++ LR H + + G+K PR F
Sbjct: 442 DSRWGERVHAVVVLR-----AESTVD-----------ADALRAHVKTL-IAGYKVPRTF- 483
Query: 531 LWRKPFPLTSTGKIRRDEVR 550
+ P+ GK+ + ++R
Sbjct: 484 QFVDALPVNGAGKVLKRDLR 503
>gi|73538583|ref|YP_298950.1| AMP-dependent synthetase/ligase [Ralstonia eutropha JMP134]
gi|72121920|gb|AAZ64106.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 518
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 262/558 (46%), Gaps = 68/558 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + TI R T +Q V LA L ++G+ G V++ ALNS
Sbjct: 2 YLTQGLHRCLQQTPDRTATIFRTRRQTFRQLGDRVARLAGALRQLGMAEGHRVSMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE++L+V + GG++ P+N RWS E ++ +L+ D+ +L + +P
Sbjct: 62 DRYLEYMLSVWWGGGVLNPVNTRWSVPEIVYSLDDCDTGILIVDDH----FLPM----VP 113
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYS---LRSLPFTHSW-APEGAVIICFTSGTT 183
+ V+ S ++ D T D + Y + P + + I +T GTT
Sbjct: 114 GI---VASASRKPVLIHVGDNATPDGMLSYERLVAEATPVEDAQRGGDDLAAIMYTGGTT 170
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G PKGV+ SH L +++++A ED + LH PL H ++ A+ + + GA H I
Sbjct: 171 GKPKGVMQSHMNLWSSAISRMAQYPCPEDTITLHACPLFHTAAMAKAVTLFVAGATHALI 230
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F++K L+ + + V ++ VP ++ A L +++I G + + L
Sbjct: 231 PAFDAKEVLDTMVREQVNEILLVPTMLQ--AVLSHPDFASHDLSGLQRINYGASPISAGL 288
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ A + P+ + AYG+TE + ++ V P H P+G
Sbjct: 289 LDAALAALPQVQFFHAYGLTEAAPVVS---------------------VNPPVNHGPEGR 327
Query: 364 C------VGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
G+ V +K+ + + VG I+ RG +VM YW++ A+ + + +
Sbjct: 328 ASGLYRSAGRAGYGVTVKIVDEQGVEVPRNTVGEIIVRGPNVMQGYWNK-PAETAATLRD 386
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WL TGD +D+ G +++V R I SGGENVY EVE VL +HP + V+G+ +A
Sbjct: 387 GWLHTGDGAYMDENGYLFIVDRLKDMIVSGGENVYSAEVENVLSRHPAVASCAVIGVPDA 446
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
R E V A + L+ Q E+ LR+HCR+ + G+K P+ + +
Sbjct: 447 RWGEAVHAVIVLKPGAQADEAG----------------LREHCRQ-FIAGYKCPK-SIEF 488
Query: 533 RKPFPLTSTGKIRRDEVR 550
R PL++ GKI + ++R
Sbjct: 489 RAEMPLSAAGKILKRDLR 506
>gi|418422838|ref|ZP_12996009.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
subsp. bolletii BD]
gi|363993911|gb|EHM15133.1| putative long-chain-fatty-acid CoA ligase [Mycobacterium abscessus
subsp. bolletii BD]
Length = 515
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 253/552 (45%), Gaps = 55/552 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
Q L R + ++TI R +T +QF V LA GL ++ GD V + +LNS
Sbjct: 2 QFTQWLHRALQQYPDRLITIDQGREHTVEQFADRVARLAAGLRANDVQPGDRVGMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAI 126
+ Y+E++ AV ++G + +N RWS E ++ S +LV D + A
Sbjct: 62 DRYVEYLTAVPWLGAALNAVNIRWSLAEIGYSLRESGTRALLVDDTFKAAAAPLRAACAC 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ G D + D+L S + T + + + + +T GTTG+P
Sbjct: 122 LETVIYCGAGPVPQDMIGYEDLLA-------SHEPIDDTRTGG-DSLLGVFYTGGTTGNP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH+ ++ ++ ++ + LH+AP+ H+ S+ +A + G+ HV +P
Sbjct: 174 KGVMLSHNNVLASAMGSLSTGNFLTRGGRLLHSAPMFHMADFSAVLAGNLSGSTHVIVPS 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F + L+A+ H V ++ VP ++ L + ++ I G + +++
Sbjct: 234 FTPQGVLDAIVAHDVQDMLLVPTMIQMLVDHPGAAQL--DLSGIRSITYGASVISEAVLQ 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
AT FP A+ AYGMTE S T + D + P L A
Sbjct: 292 RATRVFPNARFTQAYGMTEVSPVATLLLPDDH--DDPALLRSA----------------- 332
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G+ APH E+++ + V G ++ +G +VML YW + + + + + W+ TGD
Sbjct: 333 GRAAPHCEVRIVDPDDNEVPRGEIGEVIVKGDNVMLGYW-ELPDESAAAIRDGWMHTGDA 391
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +DD G V++V R + +GGENVY EVE L +HP + V+GI + + E V A
Sbjct: 392 GRMDDRGYVYIVDRIKDMVVTGGENVYSAEVENALAKHPAVAACAVIGIPDEQWGERVHA 451
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V Q CD L++HCRE ++ +K PR F + PL+
Sbjct: 452 VV----VKQAQSECCDGD------------LQEHCRE-HIANYKVPRSFEFVDE-LPLSG 493
Query: 541 TGKIRRDEVRRE 552
GKI + +R++
Sbjct: 494 AGKILKRVLRQK 505
>gi|284992142|ref|YP_003410696.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284065387|gb|ADB76325.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 514
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 165/552 (29%), Positives = 252/552 (45%), Gaps = 60/552 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + + T+ R T + V + LA GL ++G+R G+ AI +LNS
Sbjct: 2 YLTQGLHRHVQQRPDEIATVCAGRTRTHAESVDRIARLAAGLQQLGIRDGERAAILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E++ A + GG+V P+N RWS E + ++ + +LV D+ + E P
Sbjct: 62 DRYSEFLAATLWAGGVVVPVNIRWSVPEIAESLAEVDARVLVVDDVF-AGCTEGIRAGHP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW----APEGAVIICFTSGTT 183
LR HV G D ML + L S P + P G + +T GTT
Sbjct: 121 WLR-HVVHGG---DGPTPDGMLAFEQLVETSE---PVEDARRGGDQPAG---VFYTGGTT 170
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G KGV++SH L+ ++ +A D V LH AP+ H S + +VG V I
Sbjct: 171 GRAKGVLLSHDNLLTSAMGALATDHVTPDRVLLHAAPMFHAAAFSGWVGNGVVGGTQVAI 230
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F+ + L AV++H VT ++ VP ++ + RV + +V++++ G + L
Sbjct: 231 PVFDPVAVLTAVQEHGVTDVLLVPTMIQLVVDHPRVDEF--DLTTVRRLMYGASPMSDAL 288
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ P A+ + AYGMTE + T +T D Q P+ H+
Sbjct: 289 LGRTMKVLPNARFLQAYGMTELAPVATLLTADD------HQDPR----------HR---R 329
Query: 364 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VG+ APH E++V VG ++ RG VML YW++ G W+ TG
Sbjct: 330 SVGRAAPHAEVRVVGPDDVELPRGEVGEVVVRGGSVMLGYWNRPEETAEALRGG-WMHTG 388
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D G +DD G ++L R I SGGENVY EVE+VL QHP + V+G+ + E V
Sbjct: 389 DAGRMDDEGYLYLTDRLKDMIISGGENVYSVEVESVLAQHPAVATCAVIGVPDDTWGERV 448
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V ++ E LR C + L +K PR + PL
Sbjct: 449 HAVV----------------VPAAGATVTLEELRASCTGR-LASYKVPRSMDVV-DALPL 490
Query: 539 TSTGKIRRDEVR 550
+ GK+ + E+R
Sbjct: 491 SPAGKVLKRELR 502
>gi|407696003|ref|YP_006820791.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253341|gb|AFT70448.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 518
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 165/562 (29%), Positives = 260/562 (46%), Gaps = 72/562 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L + T+ G+R + + V V LA GL +GL +GD VAI +LNS
Sbjct: 2 YLTQPLHKALLEVPERTATVHGDRRRSYRDLVSRVSRLAGGLRTLGLDAGDRVAILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y+E I A + GG++ P+N RWS KE ++ +L+ D++ EL+ +
Sbjct: 62 DRYMEAIYATFWAGGVINPVNIRWSPKEIIYSLDDCDSTILIVDDTFLPLLEELRQGS-R 120
Query: 128 SLRWHVSLGSSSS-----DFVNKRDMLTADILKGYSLRSLPF--THSWAPEGAVIICFTS 180
SL+ + G ++ DF + L AD S P H + A ++ +T
Sbjct: 121 SLKTVIYAGDKAAPAGTHDF----ETLIAD--------SGPVADAHRHGNDLAAVM-YTG 167
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV++SH+ L + L A+ G V LH AP H+ G +
Sbjct: 168 GTTGKPKGVMLSHTNLYIDGLGSQAVSGMPYRSVTLHAAPTFHVAGTGLILQATARLNTS 227
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGG 298
V IP FE + L A++Q + VP ++ ++ + D S++ +L G
Sbjct: 228 VIIPMFEPLAVLRAIQQERILEAFLVPTMI----RMVLSHPDFAQYDLSSLQHLLYGASP 283
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+ S L+ A + P+A+ + AYGMTE S +++ +T P T
Sbjct: 284 IDSTLLNRAREALPQARFLQAYGMTELSPTVSILT---PDWH------------TEEGFR 328
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ + G+P P VE+++ D + V G I+ RG VM YW+ KP + +
Sbjct: 329 SGKMMSAGRPLPMVEMRIVDDNDNPVPAHTHGEIVVRGPVVMQGYWN----KPEQTDDAL 384
Query: 414 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD G +D+ G V++V R I +GGENVY EVE +LQ P + V+GI
Sbjct: 385 RGGWMHTGDAGYMDEDGFVYVVDRIKDMIVTGGENVYSAEVEEAVLQLPQVAQCAVIGIP 444
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+ E V A V L+ D S+ L + L HC+ + +K PR
Sbjct: 445 DDDWGERVHAAVVLQ----------DGSA------LELDELMAHCKTL-IANYKIPRSLE 487
Query: 531 LWRKPFPLTSTGKIRRDEVRRE 552
+ R PL+ GK+ + ++R E
Sbjct: 488 V-RSELPLSPAGKLLKYKLREE 508
>gi|383768963|ref|YP_005448026.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. S23321]
gi|381357084|dbj|BAL73914.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. S23321]
Length = 518
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 250/554 (45%), Gaps = 58/554 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R + N T+ G R + + + V LA GL G+ GD VA+ + NS
Sbjct: 2 NVTHGLRRALQINPNGSATVCGQRRRSWGELGERVARLAGGLRTRGIEDGDRVAVLSFNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE LA+ + GG++ PLN RWS E A+ R +L+ D++ +L AIP
Sbjct: 62 DRYLELYLAIGWAGGVIVPLNIRWSALENEDALRDCRASVLLVDKAFAQVGAQLA-GAIP 120
Query: 128 SLRW-HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTGS 185
L+ + G + + D++ A S P + G + I +T GTTG
Sbjct: 121 GLKLIYADDGEVPAGMESHEDLVAA---------SAPVADAMREGGDLAGIFYTGGTTGR 171
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH L+ +L + + YLH AP+ H+ ++ ++L+ G +V +
Sbjct: 172 SKGVMLSHRNLMANALNALGEGLFPASTTYLHAAPMFHLANGAAMYSLLLSGGSNVIVQG 231
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F + + A++ VT ++ VP ++ + S+K I+ G + ++
Sbjct: 232 FTPEGVMAAMQNERVTDVLLVPTMIQMFVDHPAIGNY--DLSSLKHIIYGASPISEAVLD 289
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A + P + AYGMTE S T + + G H+
Sbjct: 290 RAARALPHVRFTQAYGMTELSPIATLL-----------HADEHVGEGRRKGRHR----GA 334
Query: 366 GKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDT 417
G+ E+++ + + VG I+ RG VM+ YW+ +P + V W+ T
Sbjct: 335 GRATLGCEVRIVDENDRPLPAGSVGEIVVRGDTVMMGYWE----RPEETARAVIDGWMHT 390
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G +D+ G +++V R I SGGENVY EVE L QHP ++ V+G+ N + E
Sbjct: 391 GDGGYMDEDGFIYVVDRVKDMIISGGENVYSIEVENALAQHPSVLQCAVIGVPNEQWGEQ 450
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V R + S + EL+ ++ L + G+K PR + P P
Sbjct: 451 VHAVVVKRSGVEVS---------SGELIEFTKTL--------IAGYKCPRSIEITETPLP 493
Query: 538 LTSTGKIRRDEVRR 551
L+ GK+ + E+RR
Sbjct: 494 LSGAGKVLKRELRR 507
>gi|398820950|ref|ZP_10579446.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
gi|398228393|gb|EJN14519.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
Length = 518
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 254/552 (46%), Gaps = 54/552 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I L R + + T+ G R + + + + LA GL G++ GD VA+ + NS
Sbjct: 2 NITHGLRRALQINSKGLATVYGQRRRSWSELGERIARLAGGLRTRGIKDGDRVAVLSFNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE LA + GG++ PLN RWS E A+ R +L+ D++ +L AIP
Sbjct: 62 DRYLELYLATGWAGGVIVPLNIRWSALENEDALRDCRASVLLVDKAFAQVGAQLA-GAIP 120
Query: 128 SLRW-HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI--ICFTSGTTG 184
L+ + G ++ + D++ A ++R EG + I +T GTTG
Sbjct: 121 GLKLIYADDGEVPAEMESYEDLVAASAPVADAMR----------EGDDLAGIFYTGGTTG 170
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
KGV++SH L+ +L + + YLH AP+ H+ ++ ++++ G +V +
Sbjct: 171 RSKGVMLSHRNLMANALNALGEGLFPASTTYLHAAPMFHLANGAAMYSLMLSGGSNVIVQ 230
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F + + A++ VT ++ VP ++ + S+K ++ G + ++
Sbjct: 231 GFTPEGVMVAMQNERVTDVLLVPTMIQMFVDHPAIGNY--DLSSLKHVIYGASPISEAVL 288
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
A + P + AYGMTE S T + + G H+
Sbjct: 289 DRAARALPHVRFTQAYGMTELSPIATLL-----------HADEHVGEGRRKGRHR----G 333
Query: 365 VGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+ E+++ + + VG I+ RG VM+ YW++ L + + + + W+ TGD
Sbjct: 334 AGRATLGCEVRIVDENDQPVPAGSVGEIVVRGDTVMMGYWER-LEETARAVVDGWMHTGD 392
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
G +D+ G +++V R I SGGENVY EVE L QHP ++ V+G+ N + E V
Sbjct: 393 GGYMDEDGFIYVVDRVKDMIISGGENVYSIEVENALAQHPLVLQCAVIGVPNEQWGEQVH 452
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V R + S S EL+ ++ L + G+K PR + P PL+
Sbjct: 453 AVVVKRSGVEVSPS---------ELIEFTKTL--------IAGYKCPRSIEITETPLPLS 495
Query: 540 STGKIRRDEVRR 551
GK+ + E+RR
Sbjct: 496 GAGKVLKRELRR 507
>gi|384107460|ref|ZP_10008360.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
gi|383832407|gb|EID71881.1| fatty-acid--CoA ligase [Rhodococcus imtechensis RKJ300]
Length = 521
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 167/557 (29%), Positives = 253/557 (45%), Gaps = 71/557 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ L R A + + +T+ G+R ++ V LA L G+ GD V I ALNSE
Sbjct: 3 LTHALHRALAQRPDQTMTVDGDRSRPTREVADRVARLAGALQRAGVGVGDRVGIVALNSE 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
+ E A + G + P+N RWS E + A+T +L+ D++ + EL+ A P
Sbjct: 63 HHHEVFFASWWAGAVANPINTRWSPAEIAYALTDSGTEVLLVDDAFAGFGPELRERA-PG 121
Query: 129 LRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
LR + G+ + + + + L AD +R + + ++ +T GTTG PK
Sbjct: 122 LRTLIYCGAGPTPEGMLAYEELVADTAPVPEIRR-------SGDDVAMLLYTGGTTGKPK 174
Query: 188 GVVISHSALIVQSLA-KIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
GV+++H + + L+ +A V + TAPL HIG L S ++G VF+P F
Sbjct: 175 GVMVTHRSFMTSLLSYHLAGSSVRPGGVTMLTAPLFHIGALLSWYGQTLLGGTLVFLPTF 234
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELM 304
+ L A+++H VT VPA++ + + D S++ I G G P L+
Sbjct: 235 TPEGVLSAIDEHRVTGCALVPAMIQRICE----HPDFGTYDVSSLEFIGYGASGTPQSLL 290
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV- 363
A FP I YGMTET G L V + H+ G
Sbjct: 291 DRALEHFPSVNFIHVYGMTET-----------------GVL-----TVLGGAEHRAGGAR 328
Query: 364 --CVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKP---SVSTGEV 413
G+ P VE+ V + DG VG ++TRG HVM YW KP + + +
Sbjct: 329 LRSTGRATPIVEIAVIAPDGHPLPPGQVGEVVTRGDHVMAGYW----GKPEDTATALRDG 384
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD G +DD G +++V R I +GGENVY EVE L HP + V+G+ +
Sbjct: 385 WMHTGDGGYLDDAGYLYIVDRLKDMIITGGENVYSAEVENALAAHPAVASCAVIGVPDPD 444
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A V R +++E LR H + + G+KAPR V +
Sbjct: 445 WGERVHAVVVPRPGHS----------------VTAEELRAHAKTL-IAGYKAPRT-VDFV 486
Query: 534 KPFPLTSTGKIRRDEVR 550
P++ TGKI + E+R
Sbjct: 487 GALPVSGTGKILKRELR 503
>gi|407695854|ref|YP_006820642.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407253192|gb|AFT70299.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 523
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 266/554 (48%), Gaps = 55/554 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R A + T+ G R + ++ LA GL +G+++GD VAI A N
Sbjct: 2 YLTQGLHRAAQQAPERLATVDGERRRSYRELADRCARLAGGLTGLGVQAGDRVAILAANC 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHT-- 124
+++ E+ L + ++G + +N RW+ KE + ++ S ++LV+D +L + T
Sbjct: 62 DYHAEYFLGLWWMGAVANAVNTRWNVKEMAYSLNDSEAEILLVSDA-----FLPMVDTLK 116
Query: 125 -AIPSLRWHVSLGSSSSDFVNKRDMLTADI-LKGYSLRSLPFTHS-WAPEGAVIICFTSG 181
P LR + LG + S + D I + + R+ P + + ++ +T G
Sbjct: 117 ARCPGLRHVLHLGETPS---TQTDGPAGMIHYEDFLARATPVEDGRFGGDHLAVLLYTGG 173
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV++SH L +++++A + V L +PL H G++ + ++VG V
Sbjct: 174 TTGFPKGVMLSHDNLWSCAISRLAESDPPDPFVTLLVSPLFHTAGVAKFITQIVVGGTAV 233
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+P F ++ L A+E+ +T +I VP+++ L +V++ S+ ++ G +
Sbjct: 234 MMPSFRVEAVLAAIEREKITDVILVPSMIQMLVDHPKVRE--HDLSSLTRVAYGASPISL 291
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
+++ A FP A+ YGMTE S +T ++ N +++ +
Sbjct: 292 PVLERALAVFPDAQFTHTYGMTEASPMITL---------------NSWRNHRGEALNNGR 336
Query: 362 GVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
GK +E+++ + VG ++ RG +VML YW+ A G WL
Sbjct: 337 IRSAGKATWGMEVRIVDEDDREVPRGTVGEVVARGDNVMLGYWNNPDATAETLRGG-WLH 395
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD G +D+ G +++V R I SGGENVY EVE VL +HP + V+GI + E
Sbjct: 396 TGDGGYMDEDGYIYIVDRIKDMIVSGGENVYCAEVENVLARHPAVASCAVIGIPHDTWGE 455
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A V + + +S+E L CR+ +L G+K PR V +R
Sbjct: 456 SVHAVVVTQSGVE----------------VSAEELTDFCRD-DLAGYKCPR-SVEFRDSL 497
Query: 537 PLTSTGKIRRDEVR 550
PL+ GK+ + E+R
Sbjct: 498 PLSGAGKVLKQELR 511
>gi|441518306|ref|ZP_21000030.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454840|dbj|GAC57991.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 507
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 254/569 (44%), Gaps = 93/569 (16%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
I Q L + A + + +VTI G+R T Q + V LA + +G ++GD + I +LNS
Sbjct: 2 QITQSLRQTAQLTPDHIVTIYGDRRRTAAQTLDRVSRLAGAFVALGAQTGDRIGILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E++LA + G V P+N RWS E + ++ +L+ DE+ L+ A P
Sbjct: 62 DRYHEFLLAAPWAGCAVNPVNIRWSPAEIAYSLADCGTDILLVDETFAPMINTLKELA-P 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS-WAPEGAVIICFTSGTTGSP 186
+L + G + ML + L S P + + I +T GTTG P
Sbjct: 121 NLATVIFTGDGEA----PEGMLDYEALIA---GSDPIADAERGGDDLYGIFYTGGTTGDP 173
Query: 187 KGVVISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
KGV++SH A + ++ + I+ G LH AP+ H+ L++ + + HV +
Sbjct: 174 KGVMLSHRACLTSAMGALVTTDILTRGA--TLLHAAPMFHLADLAAWHVGCLTRSTHVIV 231
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIM-----------ADLATLIRVKKTWKGRDSVKKI 292
P F +EA+E+H V + VP ++ ADL++LI I
Sbjct: 232 PMFTPSGVIEAIERHRVVGALLVPTMIQMLVDSPEAADADLSSLIH-------------I 278
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL---YDPTLETPGQLPQAF 349
+ G + L++ P+ +L AYGMTE + T +T DP L
Sbjct: 279 IYGASPIAESLLERTFALLPEVRLTQAYGMTELAPIATLLTADDHLDPALRR-------- 330
Query: 350 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 404
G+PA H +L++ G VG I+ RG H+M YW+
Sbjct: 331 --------------SCGRPAVHSDLRIVGADGQELGRGEVGEIIVRGDHLMSGYWN---- 372
Query: 405 KPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
KP + V W+ TGD G +D G V+L R I +GGENVY EVE + +HPG+
Sbjct: 373 KPDATADAVRDGWMHTGDAGHMDANGYVFLADRLKDMIITGGENVYSVEVENAIAKHPGV 432
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
V+G+ +A+ E V A V Q +E LR+ CRE ++
Sbjct: 433 AQTAVIGVPDAQWGERVHAVVVRAPGAQVTEDE----------------LREFCRE-HIA 475
Query: 522 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+K PR V + + P++ GKI + +R
Sbjct: 476 NYKLPR-SVAFIEELPVSGAGKILKRNLR 503
>gi|94311461|ref|YP_584671.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93355313|gb|ABF09402.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 516
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 159/565 (28%), Positives = 262/565 (46%), Gaps = 75/565 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + V R T + V LA L ++G+ G+ VA+ +LNS
Sbjct: 2 YMTQALHRSMQQRPDKVAVRFNGRALTYAEIGDRVARLAGALRKLGVAEGERVAMFSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE--SSDSWYLELQHTA 125
Y+E+ +AV + G ++ P+N+RWS E + + +L+ D+ + + + + T
Sbjct: 62 ARYIEYYMAVPWAGAVLNPVNFRWSAAEIAYSFKDSGTAVLIVDDPFTEVAQKVAAECTT 121
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA-PEGAVIICFTSGTTG 184
+ + + G + + +N + L AD S P ++ + I +T GTTG
Sbjct: 122 VRHVIY-AGDGETPAGMLNY-ETLIAD--------SAPMEDAYRHGDDLAGIFYTGGTTG 171
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV++SH+ LI + + E V +H P+ H+ +S A+ +VG HV I
Sbjct: 172 FPKGVMLSHANLISSACNQPMSGTVDESIVMMHVMPMFHLACFASINAVFLVGGTHVAIS 231
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR----------DSVKKILN 294
F+ +E + Q VT+++ P T+I++ W R S+ +
Sbjct: 232 AFDPGRMMEGIAQDRVTAVLLAP-------TMIQMGLDWMDRHPGRAAELDLSSLNSLRY 284
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM--TLYDPTLETPGQLPQAFGNV 352
G + L++ +FP + YGMTE + T + +D + G++
Sbjct: 285 GASPMTPALLERTRQTFPAVRFSQGYGMTELAPVATMLGPEYHDAAAQASGKM------- 337
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP- 406
VG+PA VE+KV + V G I+ RG +VML YW+Q A
Sbjct: 338 ----------YSVGRPAHTVEVKVVDSRGNEVPRGTVGEIIVRGPNVMLGYWNQPQATAE 387
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
++ G W+ TGD G +D G ++LV R I SGGENVY EVE L HP + V
Sbjct: 388 AIRNG--WMHTGDGGYMDKDGFLFLVDRLKDMIISGGENVYSAEVEKALASHPAVAQSSV 445
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+G+ + + E V A V LR+ ES +S ++ HCRE+ + G+K P
Sbjct: 446 IGVPHEKWGESVHAVVVLRQ----GESATLES------------IQSHCRER-IAGYKIP 488
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRR 551
R V + PL+S GK+ ++E+R+
Sbjct: 489 R-SVEFVDALPLSSVGKVLKNELRK 512
>gi|226187505|dbj|BAH35609.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 515
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 269/560 (48%), Gaps = 71/560 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + +T+ G+R T + V LA ++G++ GD VAI +LNS
Sbjct: 2 YLTQSLQRSMQQRPDQPMTVCGDRIRTCAEVGGRVTRLAGAFRDLGVQVGDRVAILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E+ A ++GG V PLN RWS E + A+ +LV D++ E++ P
Sbjct: 62 DRYHEYFFATWWMGGAVNPLNTRWSAAEIAFALDDSDTRVLVVDDTFLPLLDEVR-VLFP 120
Query: 128 SLRWHVSLG-----SSSSDFVN--KRDMLTADI-LKGYSLRSLPFTHSWAPEGAVIICFT 179
L + G + + D+ N T D+ L G +L I +T
Sbjct: 121 QLAVVIHAGELPTPAGALDYENLIASSEPTPDLRLGGDTLAG--------------IFYT 166
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGA 238
GT+G PKGV+++H+ L+ SL +A G D + L TAP+ H+ L++ + VGA
Sbjct: 167 GGTSGHPKGVMLTHANLVTSSLGAVASNRTPGTDGLALITAPMFHLASLANWIGRNTVGA 226
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR-VKKTWKGRDSVKKILNGGG 297
V P FE +AL +EQH VTS++ VP + + LIR +T + S+ + G
Sbjct: 227 TLVIQPSFEPATALRLIEQHKVTSMLLVPTM---IQMLIRHPDRTNRDLSSILAVQYGAS 283
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+ L+++A +FP+A + YGMTE LT ++ D V
Sbjct: 284 PISETLLRQAQQAFPQAAFMQGYGMTEAGPGLTSLSAED-------------------HV 324
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
+ G+P HVE++V + + VG I+ RG ++M YW++ S + +
Sbjct: 325 DATRLKSAGRPMGHVEIQVVDENGNELPRGEVGEIIARGGNIMCGYWNRPEETRS-ALRD 383
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WL TGD G +D+ G +++V R I SGGENVY EVE L HP +I V+G+ +
Sbjct: 384 GWLYTGDGGYMDEAGYLFVVDRLKDMIISGGENVYSTEVENALATHPDVISCAVIGVPDD 443
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A + +R + L+ E +R H + + G+K+PR +
Sbjct: 444 QYGERVHAVLVVRPG----------------VSLTCEEVRAHSKTL-IAGYKSPRSITIV 486
Query: 533 RKPFPLTSTGKIRRDEVRRE 552
+ P++ GKI + E+RR+
Sbjct: 487 EQ-MPVSPAGKILKRELRRQ 505
>gi|421596800|ref|ZP_16040540.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. CCGE-LA001]
gi|404271089|gb|EJZ35029.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. CCGE-LA001]
Length = 518
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 248/553 (44%), Gaps = 56/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I L R + N + T+ G R + + + V LA GL G+ GD VA+ + NS
Sbjct: 2 NITHGLRRALQINPNGLATVYGQRRRSWGELGERVTRLAGGLRTRGVGDGDRVAVLSFNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE LA + GG++ PLN RWS E A+ R +L+ D+ +L AIP
Sbjct: 62 DRYLELYLATGWAGGVIVPLNIRWSALENEDALRDCRASVLLVDKVFAQVGAQLA-GAIP 120
Query: 128 SLRW-HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
L+ + G + + D++ ++R + I +T GTTG
Sbjct: 121 GLKLIYADDGEVPAGMESYEDLVAGSAPVADAMRK--------GDDLAGIFYTGGTTGRS 172
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV++SH L+ +L + + +YLH AP+ H+ ++ ++L+ G +V + F
Sbjct: 173 KGVMLSHHNLMANALNALGEGLFPGSAIYLHAAPMFHLANGAAMYSLLLSGGSNVIVQGF 232
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + A++ VT ++ VP ++ + S+K I+ G + ++
Sbjct: 233 TPEGVMAAMQNERVTDVLLVPTMIQMFVDHPAIGNY--DLSSLKNIIYGASPISEAVLDR 290
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A + P + AYGMTE S TL P Q G H+ G
Sbjct: 291 AARALPHVRFTQAYGMTELSP---IATLLHPD--------QHVGEGRKKGRHR----GAG 335
Query: 367 KPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
+ E+++ + + VG I+ RG VM+ YW+ +P + V W+ TG
Sbjct: 336 RALLGCEVRIVDENDQPLPTGAVGEIVVRGDTVMMGYWE----RPEETARAVVDGWMHTG 391
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D G +D+ G +++V R I SGGENVY EVE L QHP ++ V+GI N + E V
Sbjct: 392 DGGYMDEDGFIYVVDRVKDMIISGGENVYSVEVENALAQHPSVLQCAVIGIPNEQWGEQV 451
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V R + S EL+ ++ L + G+K PR + P PL
Sbjct: 452 HAVVVKRSGVEVS---------TGELIEFTKAL--------IAGYKCPRSIEITETPLPL 494
Query: 539 TSTGKIRRDEVRR 551
+ GK+ + E+RR
Sbjct: 495 SGAGKVLKRELRR 507
>gi|430804861|ref|ZP_19431976.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
gi|429502988|gb|ELA01291.1| AMP-dependent synthetase/ligase [Cupriavidus sp. HMR-1]
Length = 515
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 155/561 (27%), Positives = 257/561 (45%), Gaps = 76/561 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L + + V TI R T Q + V LA L G+ +GD VA+ ALNS
Sbjct: 2 YLTQALHKAFRENPSGVATIFAQRSTTFSQLIDRVARLAGALRGQGVAAGDRVAMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLEL---QHT 124
+ Y+E+I + G + P+N RWS E + ++ +L+ D++ +LEL
Sbjct: 62 DRYVEYIFGTLWAGAALNPVNTRWSVAEIAYSMEDCGTGVLLVDDN----FLELIGPLRE 117
Query: 125 AIPSLRWHVSLGSSSSD--FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
P ++ + G + + V+ ++ + SLRS H A + +T GT
Sbjct: 118 RCPCIQTVIYCGDAETPAGMVDYEQLVRSSAPIDDSLRS---GHDLA-----AVLYTGGT 169
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TG+PKGV++SH+ + L+ +A L AP+ HI LS + A V
Sbjct: 170 TGAPKGVMLSHANIASNVLSSLAAASRPPVTSILQMAPMFHIAALSFVFQAVTRLATQVI 229
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
+P F+ K+A+ + ++ + + TVP ++ ++ T+ D S++ I+ G +
Sbjct: 230 LPGFDPKAAIRDLSRYRINEVFTVPTML----KMMLDDPTFADHDLSSLRNIIYGAAPID 285
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
L++ A P ++ + AYGMTETS + + V P
Sbjct: 286 GALLQRAMAQIPSSQFLQAYGMTETSPVSAILA------------------ADCHVVASP 327
Query: 361 QGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
+ G+PAP E+++ C G+ VG + RG VML YW+ KP +
Sbjct: 328 RLKAAGRPAPACEVRIVDPATDEDCPTGT--VGEVAVRGPGVMLGYWN----KPEETARA 381
Query: 413 V---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W+ TGD G +D G +++ R I SGGENVY EVE +L HP + V+GI
Sbjct: 382 LRNGWMHTGDAGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQLCAVIGI 441
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E V A + +R + LS + + HCRE+ + +K PR
Sbjct: 442 PDEKWGEAVHAVIVVRPGHE----------------LSVDAVHAHCRER-IASYKCPR-S 483
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
V +R PL++ GK+ + ++R
Sbjct: 484 VEFRADMPLSAAGKLLKYKLR 504
>gi|407800909|ref|ZP_11147755.1| acyl-CoA synthase [Oceaniovalibus guishaninsula JLT2003]
gi|407057247|gb|EKE43237.1| acyl-CoA synthase [Oceaniovalibus guishaninsula JLT2003]
Length = 517
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 158/539 (29%), Positives = 245/539 (45%), Gaps = 52/539 (9%)
Query: 17 AAVKRNSVVTIT-GNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL 75
AA S+ ++T G R T +Q + +AR L ++G+ +GD VA +NS Y E
Sbjct: 11 AARHTGSLPSVTCGTRSLTWRQLETRIWRMARALSDLGVATGDRVAYLGVNSHRYFEMYY 70
Query: 76 AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
+ IG + PLN+R + E + + PV+L+ D LQ A+PS+R H+
Sbjct: 71 TPSRIGALAVPLNFRLADAELVQMLGDCTPVVLMADAGHFDRARALQR-AVPSIR-HLVW 128
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
+ G + I+ +T GTTG KGV++SH+
Sbjct: 129 ADDAPAPQGVPAYDDLVAGDGDDDGADIDARGSRDSDPAILFYTGGTTGRGKGVMLSHAN 188
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
L V S + + G+ + + L + P+ H+G S + ++ V +P+F++ A+ A+
Sbjct: 189 LFVNSSGAVPVYGFRQRETQLLSGPMFHLGSGSRVFSAALLCTHTVIVPRFDAAEAMRAI 248
Query: 256 EQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
E H + ++ VP ++A D R + S++ I G +P EL++ A + P
Sbjct: 249 ETHRIATVQLVPTMLAMILDHPDFARFDLS-----SLRLITYGAAVMPVELLRRALTALP 303
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+ AYGMTETS +T +T D G+L VG P PH
Sbjct: 304 GVNFVQAYGMTETSPVVTVLT-SDHHAPDSGKLD-----------------TVGLPMPHA 345
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+L++ + + G+ILTRG HVM YW+Q A G W TGD G +D G
Sbjct: 346 DLRIVDEDDRDLPTGATGQILTRGPHVMCGYWNQPEATAKALRGG-WYHTGDAGWLDTDG 404
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ + GR I SGGEN+YP E+E LL HPG+ V+G+A+ V A V
Sbjct: 405 FLHIAGRTAEMIVSGGENIYPVEIEHALLAHPGVADAAVIGVADPHWGARVHAVV----- 459
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
S ++ + L HCR + G+K PR +W P PLT+ GK+ +
Sbjct: 460 -----------SPAPGCRVTLDDLAAHCRTV-IAGYKCPRGLTVWDGPLPLTNIGKLDK 506
>gi|94314357|ref|YP_587566.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
gi|93358209|gb|ABF12297.1| AMP-dependent synthetase and ligase [Cupriavidus metallidurans
CH34]
Length = 515
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 257/561 (45%), Gaps = 76/561 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L + + V TI R T Q + V LA L G+ +GD VA+ ALNS
Sbjct: 2 YLTQALHKAFRENPSGVATIFAQRSTTFSQLIDRVARLASALRGQGVAAGDRVAMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLEL---QHT 124
+ Y+E+I + G + P+N RWS E + ++ +L+ D++ +L+L
Sbjct: 62 DRYVEYIFGTLWAGAALNPVNTRWSVAEIAYSMEDCGTSVLLVDDN----FLDLIGPLRE 117
Query: 125 AIPSLRWHVSLGSSSSD--FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
P ++ + G + + ++ ++ + SLRS H A + +T GT
Sbjct: 118 RCPCIQTVIYCGDAETPAGMIDYEQLVRSSAPIADSLRS---GHDLA-----AVLYTGGT 169
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TG+PKGV++SH+ + L+ +A L AP+ HI LS + A V
Sbjct: 170 TGAPKGVMLSHANIASNVLSSLAAASRPPVTSILQMAPMFHIAALSFVFQAVTRLATQVI 229
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
+P F+ K+A+ + ++ + + TVP ++ ++ T+ D S++ I+ G +
Sbjct: 230 LPGFDPKAAIRDLSRYRINEVFTVPTML----KMMLDDPTFADHDLSSLRNIIYGAAPID 285
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
L++ A P ++ + AYGMTETS + + V P
Sbjct: 286 GALLQRAMAQIPSSQFLQAYGMTETSPVSAILA------------------ADCHVVGSP 327
Query: 361 QGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
+ G+PAP E+++ C G+ VG + RG VML YW+ KP +
Sbjct: 328 RLKAAGRPAPACEVRIVDPATDEDCPTGT--VGEVAVRGPGVMLGYWN----KPEETARA 381
Query: 413 V---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W+ TGD G +D G +++ R I SGGENVY EVE +L HP + V+GI
Sbjct: 382 LRNGWMHTGDAGYLDADGFLYVTDRIKDMIISGGENVYSTEVENAILTHPAVQLCAVIGI 441
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E V A + +R + LS + + HCRE+ + +K PR
Sbjct: 442 PDEKWGEAVHAVIVVRPGHE----------------LSVDAVHAHCRER-IASYKCPR-S 483
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
V +R PL++ GK+ + ++R
Sbjct: 484 VEFRADMPLSAAGKLLKYKLR 504
>gi|264677845|ref|YP_003277751.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208357|gb|ACY32455.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 518
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 159/557 (28%), Positives = 262/557 (47%), Gaps = 54/557 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R ++ +I R + Q V A L +G ++GD V I +LNS
Sbjct: 2 YLTQSLRRAVQQTPHATASIYNGRKRSFAQLGDRVARFAGALQALGSQAGDRVGILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+WYLE+ +A + G V P+N RWS E + ++ +L+ D+S EL +
Sbjct: 62 DWYLEYYMACYWAGVAVNPINIRWSANEIAYSLDDCDTRILLVDDSFSPLTPELLKLS-R 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGTTGSP 186
SL+ + LG D ++ML+ + L S P S + + + +T GTTGSP
Sbjct: 121 SLQTLIHLG----DGPAPQNMLSYEALVA---DSSPVEDSMRSGDDLAGVFYTGGTTGSP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV++ H L +++ ++ + LH AP+ H+ + A+ G CHV +P+F
Sbjct: 174 KGVMLCHRNLYTNAISSVSSQIVRAGSIGLHAAPMFHLADGAFMNALFAAGGCHVMVPRF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L+A+ VT + VP ++ L + K S++++ G + L+
Sbjct: 234 DPLAVLQAIASTGVTDTLLVPTMIQMLVDHPDLHK--YDLKSLRQMAYGASPISEGLLDR 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE-TPGQLP---QAFGNVTPNS---VHQ 359
A + P + AYGMTE S T ++ P + PG+ ++ G T + +
Sbjct: 292 AMRTIPDVDFVQAYGMTEVSPIATILS---PEMHREPGRAKGRHRSAGRATACTEVRIVD 348
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
P+ G+ P E VG I+ RG VML YW++ A+ + + W+ TGD
Sbjct: 349 PE----GREVPRGE----------VGEIVVRGPGVMLGYWNK-PAETEAAIRDGWMHTGD 393
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
G +DD G V++V R I +GGENVY EVE+V+ HP + V+GI + E V
Sbjct: 394 GGRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASCAVIGIPHEHWGEQVH 453
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
+ L+ QS + +EL+ C+E+ + G+K PR V + + PL+
Sbjct: 454 VFIVLKPG---------QSLEAQELI-------HFCKER-IAGYKCPR-DVSFVEAMPLS 495
Query: 540 STGKIRRDEVRREVMSH 556
GKI + +R +H
Sbjct: 496 GAGKILKTSLRAPFWAH 512
>gi|374367482|ref|ZP_09625545.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
gi|373101008|gb|EHP42066.1| AMP-dependent synthetase and ligase [Cupriavidus basilensis OR16]
Length = 468
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 141/499 (28%), Positives = 242/499 (48%), Gaps = 55/499 (11%)
Query: 64 ALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH 123
++NS YLE+ +AV + GG++ P+N RWS E A+ ++L+ D++ + +L +
Sbjct: 3 SINSARYLEYDMAVPWAGGVLNPVNIRWSSAEILYALNDSASLILIVDDTFKALGTKLAN 62
Query: 124 TAIPSLRW--HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA-PEGAVIICFTS 180
A ++R + G + + ++ ++ A + P +W + I +T
Sbjct: 63 EA-GTVRHLIYAGDGETPAGMLSYEQLIEA---------AEPIEDAWRHGDDLAGIFYTG 112
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKGV++SH+ L + ++A++ G D +LH P+ H+ ++ A+ + G H
Sbjct: 113 GTTGFPKGVMLSHNNLGISAMAQLMTGRCGADAAFLHAMPMFHLANFAAVCALFISGGTH 172
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR---DSVKKILNGGG 297
V IP F + LEA+ + VT + P ++ L ++ R S+K I G
Sbjct: 173 VVIPAFTPLATLEAISRDRVTQITLAPTMLQMLLDWLKQHPGEAARLDMSSLKLIGYGAS 232
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+ L+++A +FP+ YGMTE + T+ P T +AF + +
Sbjct: 233 PISQTLLRQAQQTFPETDFAQGYGMTELAP---LATVLGPEYHT----EEAFASGKMRA- 284
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
GKP VE+K+ + VG I RG +VML YW+Q A G
Sbjct: 285 -------AGKPHLCVEVKIVDEFDREVPRGTVGEIAVRGGNVMLGYWNQPEATAQAVRGG 337
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD G +D+ G +++V R I SGGEN+Y EVE + P + V+G+ +
Sbjct: 338 -WMHTGDGGYMDEEGLIYVVDRIKDMIVSGGENIYSAEVENAIASQPAVGQCAVIGVPSE 396
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A + L++ + ++E ++ HCR K + G+K PR V +
Sbjct: 397 KWGETVHAVIVLKQG----------------AIATAEEIQAHCR-KRIAGYKCPR-SVEF 438
Query: 533 RKPFPLTSTGKIRRDEVRR 551
R+ PL+S GKI ++++R+
Sbjct: 439 REALPLSSVGKILKNDLRK 457
>gi|426408980|ref|YP_007029079.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
gi|426267197|gb|AFY19274.1| AMP-dependent synthetase and ligase [Pseudomonas sp. UW4]
Length = 518
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 142/553 (25%), Positives = 262/553 (47%), Gaps = 58/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R+ + ++V T+ +R T + + V LA L ++G+++GD V + LNS
Sbjct: 2 YLTQGLHRVLQQRPHAVATVFRDRRRTYAELAERVARLAGALQQLGMQTGDRVGLLGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
+ +LE+ LA + GG+V P+N RWS E ++ +L+ D++ ++ +A +
Sbjct: 62 DRFLEYFLATWWGGGVVNPVNIRWSVPEIVYSLDDCDTRILLIDDTFLPMAEDIAGSAKV 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGTTGS 185
L H+ G ++ ++ + P ++ + I +T GTTG
Sbjct: 122 RPLLIHIGDGPLPEGMLSYEQLIR---------EATPVDDAFRGGDDLASIMYTGGTTGR 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV+ SH L ++A+ A V D + LH AP+ H+ LS + + ++G +F+P
Sbjct: 173 PKGVMQSHMNLWTAAVARAADVPVPADALTLHIAPMFHLAALSRVILISLLGLPSIFVPA 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++ + +E+ +T ++ VP ++ A ++ + ++ + G + L++
Sbjct: 233 FDALDVMRTIERERITDILIVPTMLQ--ALIMHPEFARHDLSCLRSLTYGASPIAVPLLE 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A + P + YGMTE + P + G P+ N + + +
Sbjct: 291 LALKALPNVEFTQGYGMTEAA----------PPISANG--PE---NHSAEGIANGRLRSA 335
Query: 366 GKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDT 417
G+P V +++ + + VG +L RG ++ML YW+ KP + + W+ T
Sbjct: 336 GRPGLGVTVRIVDEHDNEVPRGTVGEVLVRGPNIMLGYWN----KPEETAQALRGGWMHT 391
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD +DD G +++V R I SGGENVY EVE+ + HP + V+GI A+ E
Sbjct: 392 GDGAYMDDDGFIYIVDRFKDMIVSGGENVYSGEVESAISSHPAVAACAVIGIPCAQWGEA 451
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A + L+ D + ++ +HCR + + G+K P+ V +R P
Sbjct: 452 VHAVIVLKP---------DHEAAGAAII-------EHCR-RQIAGYKTPK-SVEFRTALP 493
Query: 538 LTSTGKIRRDEVR 550
L+ GK+ + ++R
Sbjct: 494 LSGAGKVLKRDLR 506
>gi|418532534|ref|ZP_13098437.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
gi|371450393|gb|EHN63442.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
Length = 518
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 261/556 (46%), Gaps = 52/556 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R ++ +I R + Q + V A L +G ++GD V I +LNS
Sbjct: 2 YLTQSLRRAVQQTPHATASIYNGRKRSFAQLGERVARFAGALQALGAQAGDRVGILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+WYLE+ +A + G V P+N RWS E + ++ +L+ D+S E+ +
Sbjct: 62 DWYLEYYMACYWAGVAVNPINIRWSANEIAYSLDDCDTCILLVDDSFAPLMPEILKLS-R 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
SL+ + LG+ + ++ML+ + L S S V +T GTTGSPK
Sbjct: 121 SLKTLIHLGNGPA----PQNMLSYEALVADSSPVEDAMRSGDDLAGVF--YTGGTTGSPK 174
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFE 247
GV++ H L +++ ++ + LH AP+ H+ + A+ G CHV +P+F+
Sbjct: 175 GVMLCHRNLYTNAISGLSSQIVRAGSIGLHAAPMFHLADGAFMNALFAAGGCHVMVPRFD 234
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+ L+A+ VT + VP ++ L V K S++++ G + L+ A
Sbjct: 235 PIAVLQAIASTGVTDTLLVPTMIQMLVDHPDVHK--YDLSSLRQMAYGASPISEGLLDRA 292
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE-TPGQL---PQAFGNVTPNS---VHQP 360
+ P + AYGMTE S T ++ P + PG+ ++ G T + + P
Sbjct: 293 MRTIPDVGFVQAYGMTEVSPIATILS---PEMHREPGRARGRHRSAGRATACTEVRIVDP 349
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ G+ P E VG I+ RG VML YW++ A+ + + W+ TGD
Sbjct: 350 E----GREVPRGE----------VGEIVVRGPGVMLGYWNK-PAETEAAIRDGWMHTGDG 394
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +DD G V++V R I +GGENVY EVE+V+ HP + V+GI + E V
Sbjct: 395 GRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASCAVIGIPHEHWGEQVHV 454
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ L+ QS + +EL+ C+E+ + G+K PR V + + PL+
Sbjct: 455 FIVLKPG---------QSLEAQELI-------HFCKER-IAGYKCPR-DVSFVEAMPLSG 496
Query: 541 TGKIRRDEVRREVMSH 556
GKI + +R +H
Sbjct: 497 AGKILKTSLRAPFWAH 512
>gi|398867497|ref|ZP_10622955.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398236773|gb|EJN22544.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 518
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 260/557 (46%), Gaps = 66/557 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R+ + +++ T+ +R +T Q V LA L +G+ +GD V + LNS
Sbjct: 2 YLTQGLHRVLQQRPHALATVFHDRRHTYAQLADRVARLAGALQRLGMATGDRVGLLGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
+ +LE+ LA + GG+V P+N RWS E ++ +L+ D++ + TA +
Sbjct: 62 DRFLEYYLATWWGGGVVNPVNIRWSVAEIVYSLDDCDTRILMIDDTFLPMAEAIASTARV 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDML-----TADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
L HV G + ++ ++ D +G + I +T G
Sbjct: 122 RPLLIHVGDGPAPDGMLSYERLIRDAEPVDDAFRG-------------GDDLASILYTGG 168
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV+ SH L ++A+ A V D + LH AP+ H+ LS + + ++G +
Sbjct: 169 TTGRPKGVMQSHMNLWSAAVARAADVPVPADALTLHIAPMFHLAALSRVILISLLGLPSI 228
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
F+P F++ + ++ +E+ +T ++ VP ++ L + G ++ + G +
Sbjct: 229 FVPAFDALAVMQTIERERITDILIVPTMLQALIMHPEFARHDLG--CLRSLTYGASPIAV 286
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
L++ A + P + YGMTE + P + G P+ N + + +
Sbjct: 287 PLLELALKALPNVEFTQGYGMTEAA----------PPISANG--PE---NHSAEGIANGR 331
Query: 362 GVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV--- 413
G+P V +++ + + VG +L RG ++ML YW+ KP + +
Sbjct: 332 LRSAGRPGLGVTVRIVDEQDNEVPRGTVGEVLVRGPNIMLGYWN----KPEETAQALRGG 387
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD +DD G +++V R I SGGENVY EVE+ + HP + V+GI A+
Sbjct: 388 WMHTGDGAYMDDDGYLYIVDRFKDMIVSGGENVYSGEVESAIASHPAVAACAVIGIPCAQ 447
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A V L+ D +++ +HCR + + G+K P+ V +R
Sbjct: 448 WGEAVHAVVVLK---------SDNEVAGAQII-------EHCR-RQIAGYKTPK-SVEFR 489
Query: 534 KPFPLTSTGKIRRDEVR 550
PL+ GK+ + ++R
Sbjct: 490 TTLPLSGAGKVLKRDLR 506
>gi|299533478|ref|ZP_07046858.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298718535|gb|EFI59512.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 518
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 157/556 (28%), Positives = 261/556 (46%), Gaps = 52/556 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R ++ +I R + Q + V A L +G ++GD V I +LNS
Sbjct: 2 YLTQSLRRAMQQTPHATASIYNGRKRSFAQLGERVARFAGALQALGAQAGDRVGILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+WYLE+ +A + G V P+N RWS E + ++ +L+ D+S EL +
Sbjct: 62 DWYLEYYMACYWAGVAVNPINIRWSANEIAYSLDDCDTRLLLVDDSFAPLTPELLKLS-R 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGTTGSP 186
SL+ + LG + ++ML+ + L S P S + + + +T GTTGSP
Sbjct: 121 SLQTLIHLGDGPA----PQNMLSYEALVA---DSSPVEDSMRSGDDLAGVFYTGGTTGSP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV++ H L +++ ++ + LH AP+ H+ + A+ G CHV +P+F
Sbjct: 174 KGVMLCHRNLYTNAISGVSSQIVRAGSIGLHAAPMFHLADGAFMNALFAAGGCHVMVPRF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L+A+ VT + VP ++ L + K S++++ G + L+
Sbjct: 234 DPLAVLQAIASTGVTDTLLVPTMIQMLVDHPDLHK--YDLKSLRQMAYGASPISEGLLDR 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP---QAFGNVTPNS---VHQP 360
A + P + AYGMTE S T ++ PG+ ++ G T + + P
Sbjct: 292 AMRTIPDVDFVQAYGMTEVSPIATILSA--EMHREPGRAKGRHRSAGRATACTEVRIVDP 349
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ G+ P E VG I+ RG VML YW++ A+ + + W+ TGD
Sbjct: 350 E----GREVPRGE----------VGEIVVRGPGVMLGYWNK-PAETEAAIRDGWMHTGDG 394
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +DD G V++V R I +GGENVY EVE+V+ HP + V+GI + E V
Sbjct: 395 GRMDDEGYVFVVDRIKDMIVTGGENVYSIEVESVIATHPAVASCAVIGIPHEHWGEQVHV 454
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ L+ QS + +EL+ C+E+ + G+K PR V + + PL+
Sbjct: 455 FIVLKPG---------QSLEAQELI-------HFCKER-IAGYKCPR-DVSFVEAMPLSG 496
Query: 541 TGKIRRDEVRREVMSH 556
GKI + +R +H
Sbjct: 497 AGKILKTSLRAPFWAH 512
>gi|226187518|dbj|BAH35622.1| probable fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 510
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 267/563 (47%), Gaps = 81/563 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q + R + +T+ G+R + +Q V+ + LA GL +GL+ GD VAI ALNS
Sbjct: 2 QLTQFVHRSMRAAPETPMTVFGDRVRSCRQSVERITKLAGGLQAMGLQPGDRVAILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+WY E ++A + G + +P+N RWS E + A+ L+ D++ L+ + P
Sbjct: 62 DWYHEALVACWWSGAVASPVNTRWSPAEITYALEDSGSTFLLVDDNFAPAASALRESC-P 120
Query: 128 SLRWHVSLGSSSS-----DF--VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
SL + G + D+ V + AD+ G +L + +T
Sbjct: 121 SLATVIYCGEGQAPEGMLDYERVISESVPVADLRVGGDTLAL-------------LLYTG 167
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
GTTG PKGV++SH +LI +L +A V L PL HI G+ +A ++G
Sbjct: 168 GTTGVPKGVMVSHRSLITSALGTLAAGNVAVSGGVNLAVNPLFHIAGIVGWLAQSLMGGT 227
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK-GRDSVKKILNGGGG 298
VF+ +F LEAV++H T++ VP + L LI + T SV+ + G
Sbjct: 228 QVFLSRFSPGIFLEAVDRHRPTTVGLVPTM---LQMLISHEDTASYDLTSVRVLRYGASP 284
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT--LETPGQLPQAFGNVTPNS 356
+ L+ + FP + YGMTET+ +++ P+ LE G+L ++ G +
Sbjct: 285 ISPTLLGQVMQMFPNSAFAQGYGMTETA----HISVLSPSDHLEG-GELLRSAGRIL--- 336
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
PH E+++ + VG I+T G+H+ML YW+ KP + T
Sbjct: 337 -------------PHCEVRIVDPAGTELPPGEVGEIVTFGSHIMLGYWN----KP-IETA 378
Query: 412 EV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
EV W+ TGD G +D+ G +++V R I +GGENVY EVE L +H + V+
Sbjct: 379 EVLRDGWMHTGDAGYLDERGYLFIVDRIKDMIVTGGENVYSTEVENALARHESVAACSVI 438
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ +++ E V A V LR ++SN D + LR H + + G+K PR
Sbjct: 439 GLPDSQWGERVHAVVVLR-----ADSNVD-----------VDALRAHVKTL-IAGYKVPR 481
Query: 528 LFVLWRKPFPLTSTGKIRRDEVR 550
F + P+ GK+ + ++R
Sbjct: 482 SF-QFVDALPVNGAGKVLKRDLR 503
>gi|374621345|ref|ZP_09693879.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374304572|gb|EHQ58756.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 517
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/545 (27%), Positives = 253/545 (46%), Gaps = 52/545 (9%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
+ R A + +SV T + + V +LA GL +GL GD V I +LN Y E
Sbjct: 8 IERAARLNGHSVATSYKGSETSWTKTQNRVGSLAAGLKSLGLCEGDRVGILSLNCANYYE 67
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
+ A+ + G V PLN RW+ E AI+ ++ D++ + EL+ + LR
Sbjct: 68 ALFAIPWAGFCVVPLNTRWAVPENEYAISDSGTRVVFFDDAFTAQVDELR-GKVAELRHC 126
Query: 133 VSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ +G S D+ L + L + S P T + I +T GTTG PKGV+
Sbjct: 127 IFIGEGSCPDWA-----LDLETLIQNNDPSAPSTR--GGDDMAGIFYTGGTTGFPKGVMQ 179
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSA 251
SH A+ + + + G G+ YLH AP+ H+ + MA + A +V + F+ +
Sbjct: 180 SHWAIWASGMGSLPMFGMGQSSRYLHVAPMFHMADFAGGMAATLSAARNVVMQSFDPTAV 239
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
E + +T + VPA++ L L S++KI+ G +P+ ++ +
Sbjct: 240 YETIADEEITHALLVPAMIKML--LDHPNAATADMSSMEKIMYGASPMPAATLERCMELW 297
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
P L+ AYG TE + T ++ D +A G + ++ G+P P
Sbjct: 298 PHIGLVQAYGQTELAPIATMLSPED---------HRAGGQILKSA---------GRPTPI 339
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+++V SD G ++ RG H M+ YW++ A+ + + W+ TGD G D+
Sbjct: 340 NDVRVVSDEGDDCAVGESGEVVVRGPHTMMGYWNK-PAETEKALKDGWVYTGDAGLFDEN 398
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +++V R + +GGENV+ EVE L+ H + + V+GI + E V A V L
Sbjct: 399 GYLYIVDRLKDMVVTGGENVFTTEVENALISHDAVQDVSVIGIPHEEWGEAVHAIVIL-- 456
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ +S+ +EL+ HCR ++ G+K P+ F +P PL+ GK+ +
Sbjct: 457 -------HAGESAGEEELV-------AHCR-ASIAGYKVPKGFTFRNEPMPLSGAGKVLK 501
Query: 547 DEVRR 551
E+R+
Sbjct: 502 TELRK 506
>gi|398952613|ref|ZP_10674888.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
gi|398154923|gb|EJM43383.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM33]
Length = 518
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/553 (25%), Positives = 261/553 (47%), Gaps = 58/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R+ + ++V T+ +R T + + V LA L ++G+++GD V + LNS
Sbjct: 2 YLTQGLHRVLQQRPHAVATVFRDRRRTYAELAERVARLAGALQQLGMQTGDRVGLLGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
+ +LE+ LA + GG+V P+N RWS E ++ +L+ D++ ++ +A +
Sbjct: 62 DRFLEYFLATWWGGGVVNPVNIRWSVPEIVYSLDDCDTRILLIDDTFLPMAEDIAGSAKV 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGTTGS 185
L H+ G ++ ++ + P ++ + I +T GTTG
Sbjct: 122 RPLLIHIGDGPLPEGMLSYEQLIR---------EATPVDDAFRGGDDLASIMYTGGTTGR 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV+ SH L ++A+ A V D + LH AP+ H+ LS + + ++G +F+P
Sbjct: 173 PKGVMQSHMNLWTAAVARAADVPVPADALTLHIAPMFHLAALSRVILISLLGLPSIFVPA 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++ + +E+ +T ++ VP ++ A ++ + ++ + G + L++
Sbjct: 233 FDALDVMRTIERERITDILIVPTMLQ--ALIMHPEFARHDLSCLRSLTYGASPIAVPLLE 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A + P + YGMTE + P + G P+ N + + +
Sbjct: 291 LALKALPNVEFTQGYGMTEAA----------PPISANG--PE---NHSAEGIANGRLRSA 335
Query: 366 GKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDT 417
G+P V +++ + + VG +L RG ++ML YW+ KP + + W+ T
Sbjct: 336 GRPGLGVTVRIVDEHDNEVPRGTVGEVLVRGPNIMLGYWN----KPEETAQALRGGWMHT 391
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD +DD G +++V R I SGGENVY EVE+ + HP + V+GI + E
Sbjct: 392 GDGAYMDDDGYIYIVDRFKDMIVSGGENVYSGEVESAISSHPAVAACAVIGIPCVQWGEA 451
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A + L+ D + ++ +HCR + + G+K P+ V +R P
Sbjct: 452 VHAVIVLKP---------DHEAAGAAII-------EHCR-RQIAGYKTPK-SVEFRTALP 493
Query: 538 LTSTGKIRRDEVR 550
L+ GK+ + ++R
Sbjct: 494 LSGAGKVLKRDLR 506
>gi|88704664|ref|ZP_01102377.1| long-chain-fatty-acid CoA ligase [Congregibacter litoralis KT71]
gi|88700985|gb|EAQ98091.1| long-chain-fatty-acid CoA ligase [Congregibacter litoralis KT71]
Length = 518
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 241/532 (45%), Gaps = 61/532 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R+ + + V LA + +G+ SGD VAI ALNS+ YLE+ AV + G V P+N R
Sbjct: 26 RNRSWTEMQDRVARLASAIRAMGVASGDRVAILALNSDRYLEYYFAVWWAGAAVVPMNTR 85
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLT 150
WS +E + A+ +L D++ E+ TA SL V G D
Sbjct: 86 WSAEENAYALGDAGAKVLFIDDAFAPMLKEM--TAELSLTHIVFTG---------EDATP 134
Query: 151 ADILKGYSLRSLPFTHSWAPEGAVIIC---FTSGTTGSPKGVVISHSALIVQSLAKIAIV 207
L SL + A G + +T GTTG PKGV++S AL +L+ +
Sbjct: 135 EGCLDYESLIAANEPCEDAERGGDDLAGLYYTGGTTGFPKGVMLSQQALWFNNLSVSSGS 194
Query: 208 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
Y DVYLH P+ H+ + + A G CH F+P F+ ++ +E VT + VP
Sbjct: 195 SYQMGDVYLHAGPMFHLADGAFSGAACTNGLCHTFLPSFDLSKVMDLLEAEKVTHTLMVP 254
Query: 268 AIMADLATLIRVKKTWKGR-DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
+ L L+ GR +++ + G +P LM P + YG TE +
Sbjct: 255 TM---LGMLVNHPDFDPGRLSALRSVAYGASPMPEGLMHTLLERLPNIGWMQGYGQTEMA 311
Query: 327 SSLTFMTLYDPTLETP--GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DG--- 380
+T + + TLE P G++ A G+ AP VE+++C DG
Sbjct: 312 PIITLLPAENHTLEGPNAGKMRSA-----------------GRAAPGVEVRICDEDGKDL 354
Query: 381 -SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 439
+ VG I+ R M YW++ + +G W+ TGD DD G +++V R I
Sbjct: 355 PNGEVGEIVARAPGSMSGYWNRPEQTEATLSGG-WVKTGDGAYRDDDGFIFIVDRLKDMI 413
Query: 440 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 499
+GGENV+ EVE + HP + + V+GI + R E V A V L+E QS
Sbjct: 414 VTGGENVFSAEVENAVSTHPAVAAVSVIGIPDERWGEAVHAIVILQEG---------QSV 464
Query: 500 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+EL+ +H + +K PR +PFPL+ GKI + E+R+
Sbjct: 465 TVEELI-------EHTH--TIANYKRPRSISFRDEPFPLSGAGKILKTELRK 507
>gi|256392289|ref|YP_003113853.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256358515|gb|ACU72012.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 550
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 174/571 (30%), Positives = 257/571 (45%), Gaps = 81/571 (14%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L+RIAA R++++ R T QF +LARG+L G+ GD V I + N
Sbjct: 32 LARIAAAYPDRDALIECATGRRWTYAQFDAAAADLARGMLAAGVAKGDRVGIWSPNC--- 88
Query: 71 LEWIL---AVAFIGGIVAPLN-------YRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
EWIL A A +G I+ LN R++ K++ ++ + + S Y+
Sbjct: 89 AEWILVQYAAAKVGAILVNLNPAYRDHEIRFTLKQSGTSL------LFAATQVKTSDYVA 142
Query: 121 LQHTA---IPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 176
+ P L V +G+ + FV + + A L R P+ + I
Sbjct: 143 MVSAVREDCPDLHDVVFIGTPGWTAFVERGATVPASTLAERESR-------LHPDDPMDI 195
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLM 235
+TSGTTG PKG +SH ++ + G+ +D PL H G+ +
Sbjct: 196 QYTSGTTGFPKGATLSHRNVLGNGYMVAEVQGWTHEDRVCLPVPLYHCFGMVMGNLGATS 255
Query: 236 VGACHVFI-PKFESKSALEAV-EQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKI 292
G+C V P F+ L AV E+HC T L VP + +A+LA L + T+ S++
Sbjct: 256 HGSCMVLPGPLFDPADTLRAVSEEHC-TVLYGVPTMFIAELALLEKTPDTYD-LSSLRTG 313
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P E+MK A + AYGMTETS ++ T D +LE
Sbjct: 314 VMAGSPCPVEVMKRVIGEMGMADVTIAYGMTETSP-VSTQTRRDDSLER----------- 361
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKP 406
+ VG+ PHVE+K+ G+ G + TRG VML YWD+
Sbjct: 362 --------RVATVGRVHPHVEIKIVDPDTGATLGADEPGELCTRGYSVMLGYWDEPQRTA 413
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
G+ W+ TGD+ +D G V +VGR + GGENVYP EVE L HP + + V
Sbjct: 414 EAVDGDGWMHTGDLAQMDADGYVAIVGRIKDMVIRGGENVYPREVEEFLYSHPDVEDVQV 473
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+G+ + + E ++A VRLR Q L+ E +R C E L +K P
Sbjct: 474 IGVPDQKYGEELMAWVRLRPGAQ---------------PLTPEAVRTFC-EGRLAHYKIP 517
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
R +V FP+T TGK+R+ E+R + M L
Sbjct: 518 R-YVHIVDGFPMTVTGKVRKVEMREQAMEIL 547
>gi|385206541|ref|ZP_10033411.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385186432|gb|EIF35706.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 518
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 255/551 (46%), Gaps = 54/551 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + V R T ++F V LA L IG+ + D V + ALNS
Sbjct: 2 YLTQGLHRSLQQNPDRVAISFKERRRTFREFADRVARLAAALRGIGMTADDRVGMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
+ YLE+++ V + GG++ P+N RWS E + ++ +L+ D+ E+ A
Sbjct: 62 DRYLEYVMGVWWGGGVLNPVNIRWSAAEIAYSLNDCDTRILIVDDRFADITREVCALART 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
P + H G++ ML+ D L + +P + A I+ +T GTTG P
Sbjct: 122 PPILIHAGDGAAPPG------MLSFDALIATAA-PMPDAGRGGADLACIM-YTGGTTGFP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV+ +H + L +IA LH AP H+ GL A+ + G HV IP F
Sbjct: 174 KGVMQTHLNIWSSCLMRIAESAPLPGSAVLHAAPFFHVAGLGRALVQFIAGEAHVVIPAF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
++ L A+ + V+ + VP ++ + +T S+K++ G +P L+
Sbjct: 234 DAGDVLRAIGEERVSDTLLVPTMIQAVLNHPDFART--DLSSLKRLTYGASPIPETLLDR 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV--C 364
+ P +L +YGMTE S+ + +P +A + G+
Sbjct: 292 LIEALPGIQLAHSYGMTEACPSI--------SANSPSNHDEA---------GRKSGLYRS 334
Query: 365 VGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
+G+ P + +KV SDG VG I+ RG +VM YW + + + + E WL TGD
Sbjct: 335 IGRGLPGLMVKVVGSDGEEVPRGTVGEIVVRGPNVMAGYWRK-PEETAQAVREGWLHTGD 393
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+D G +++V R I SGGENVY EVE+V+ +HP + V+GI + E V
Sbjct: 394 GAYMDAQGYLYIVDRIKDMIVSGGENVYSAEVESVIARHPAVAACAVIGIPHDTWGEAVH 453
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V C + L+ E +R+HCR+ + G+K P+ V +R+ PL+
Sbjct: 454 AVV-----------VCKPGAT-----LAEEEIREHCRQV-IAGYKCPK-SVEFREQLPLS 495
Query: 540 STGKIRRDEVR 550
GK+ + +R
Sbjct: 496 GAGKVLKRAIR 506
>gi|254517286|ref|ZP_05129343.1| feruloyl-CoA synthetase [gamma proteobacterium NOR5-3]
gi|219674124|gb|EED30493.1| feruloyl-CoA synthetase [gamma proteobacterium NOR5-3]
Length = 519
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 149/539 (27%), Positives = 238/539 (44%), Gaps = 96/539 (17%)
Query: 42 VLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT 101
V +LA L +G+ G+ VAI ALNS+ YLE+ AV + G +V P+N RWS E + A+
Sbjct: 37 VASLAAALRGMGVEPGERVAILALNSDRYLEYYFAVWWAGAVVVPMNTRWSEVENAYALK 96
Query: 102 SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRS 161
+L D++ F D +TAD+ SL+S
Sbjct: 97 DAGATVLFVDDT----------------------------FAPMLDAITADV----SLKS 124
Query: 162 LPFT-HSWAPEGAVI-----------------------ICFTSGTTGSPKGVVISHSALI 197
+ FT P+G + + +T GTTG PKGV++S AL
Sbjct: 125 VVFTGEGHRPDGTLDYETLIVENEPCEDAERNGDDLAGLYYTGGTTGFPKGVMLSQQALW 184
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQ 257
+L+ + Y DVYLH P+ H+ + + A G CH F+P F+ ++ +E
Sbjct: 185 FNNLSVSSASNYLCGDVYLHAGPMFHLADGAFSGAACTGGLCHTFLPAFDPVKVMDLIEG 244
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
+T + VP ++ LA + +++ + G +P LM P +
Sbjct: 245 EQITHTLMVPTMLGMLANHPDFDP--QRLRTLRSVAYGASPMPEGLMLNLLEVLPWIGWM 302
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
YG TE + +T + + TLE P H + G+ P VE+++C
Sbjct: 303 QGYGQTEMAPIITLLAAENHTLEGP---------------HAGKLRSAGRAGPGVEIRIC 347
Query: 378 SDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
D + VG I+ R ML YW++ + + + + W++TGD DD G +++V
Sbjct: 348 DDQGNDLPNGEVGEIVARSPGSMLGYWNR-PEQTADTLKDGWVNTGDGAYRDDDGFIFIV 406
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R I +GGENV+ EVE + HP + + V+GI + + E V A V L E
Sbjct: 407 DRLKDMIVTGGENVFSAEVENAVSTHPAVAAVSVIGIPDEKWGEAVHAIVILHEG----- 461
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
Q++ +ELL + + + +K PR +PFPL+ GKI + E+R+
Sbjct: 462 ----QTATAEELLEHTVPV--------IANYKRPRSISFRTEPFPLSGAGKILKTELRK 508
>gi|453382972|dbj|GAC82634.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 551
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 255/558 (45%), Gaps = 63/558 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA--- 76
R +++ R T +F++DV LA GLL +G+ GD V + A N EW+LA
Sbjct: 39 DRIALIDAAAGRQWTYTEFLRDVRALAAGLLRLGVAPGDRVGLWAPNR---FEWVLAQYA 95
Query: 77 VAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWY---LELQHTAIPSLRWH 132
A IG I+ +N + E A+T S ++L + DS Y LE P LR
Sbjct: 96 TAEIGAILVNVNPAYRQNELEYALTQSGTGLVLAAERFKDSGYATMLEEARPKCPDLRDV 155
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V S ++ LTA + R S +P+ AV I +TSGTTG PKG +S
Sbjct: 156 VLF--ESPEWAE----LTARPSEEELARVAEVAASLSPDDAVNIQYTSGTTGFPKGATLS 209
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKS 250
H + ++GY DD P H G + +A GA V P F+ ++
Sbjct: 210 HRNIGNNGYLVGELLGYTADDRICIPVPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPRA 269
Query: 251 ALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGR-DSVKKILNGGGGLPSELMKEAT 308
AL+AVE++ TSL VP + +A+LA L ++ S++ + G P +M++
Sbjct: 270 ALDAVEKYRCTSLYGVPTMFIAELALLDSAPDGYRPDLSSLRTGIMAGSPCPEHVMRQVV 329
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+ +++ YGMTETS T + DP G VG+
Sbjct: 330 DRMHMSEVSICYGMTETSPVSTQTRVDDPLELRVG--------------------TVGRV 369
Query: 369 APHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+K+ G + G + TRG VM YW+ + W+ TGD+
Sbjct: 370 GPHLEIKIIDPTTGETLGRNETGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAE 429
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A V
Sbjct: 430 MDDAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWV 489
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
RLR+ + D L++E +R E + K PR +V K FP+T TG
Sbjct: 490 RLRD-------HADD--------LTAEDVRAFA-EGKIARHKIPR-YVHVVKEFPMTVTG 532
Query: 543 KIRRDEVRREVMSHLKSL 560
K+R+ +R E + ++ L
Sbjct: 533 KVRKVAMREEAIHLIEEL 550
>gi|84502505|ref|ZP_01000641.1| AMP-binding enzyme family protein [Oceanicola batsensis HTCC2597]
gi|84389317|gb|EAQ02114.1| AMP-binding enzyme family protein [Oceanicola batsensis HTCC2597]
Length = 517
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 245/560 (43%), Gaps = 74/560 (13%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
Q R A V TI G T + V LA L G+ GD VA+ A NS +
Sbjct: 5 QSFRRAAQVFGKRTATIDGAGIQTWSEVAGRVERLAGALAAQGVSEGDRVALLAHNSARF 64
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLR 130
E + + +IG + PLN RWS E + + P ++ D+ L+L+ P+L
Sbjct: 65 FEAVFSTLWIGAVSVPLNTRWSQAELAYGLEDSEPKVIFVDDEFLEVTLKLRDEVAPNLV 124
Query: 131 WHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAP-EGAVIICFTSGTTGSPKG 188
G S+ V+ + L A + P ++ P + +IC+T GTTG KG
Sbjct: 125 VIRLTGEGSTGPAVHDLEALVA--------ANDPAEPAYGPVQSLAMICYTGGTTGQSKG 176
Query: 189 VVISHSALIVQSLAKIAIVGYGED--------DVYLHTAPLCHIGGLSSAMAMLMVGACH 240
V++SH AL +L G+G D L PL H+GGL S AM + C
Sbjct: 177 VMLSHLALWSSAL------GFGADVRDLVHESSTSLLVMPLFHVGGLLSLFAMTLGAGCC 230
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGG 298
VF+ F+ ++ +E VT LI VP ++ +I +K + D S+K + G
Sbjct: 231 VFMRAFDPLEVMQTIESRGVTHLILVPTMI----RMIIDRKDLEDYDLSSIKVLSYGASP 286
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+ + E P L +YG TE S ++ + + + G+
Sbjct: 287 MTEGQIAETLEKLPGVNLQQSYGQTELSPYISKLAMEQHVSDANGE-------------- 332
Query: 359 QPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ VG E+ + D VG IL RG H M YW KP + +
Sbjct: 333 -ARLTSVGHAGIMAEVIIADDDLREMPRREVGEILVRGPHTMTGYW----RKPDETAATL 387
Query: 414 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD+G +D+ G +++V R+ I +GGENVY EVE L HP + VV+GI
Sbjct: 388 VNGWVRTGDVGWMDEEGFIYIVDRKKDMIVTGGENVYSSEVENALSAHPAVAIAVVIGIP 447
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+ R E V A + R+ ++++ KEL+ +HCR + + G+K PR
Sbjct: 448 DDRWGEAVHAIIVCRD---------ERTATEKELI-------EHCRSR-IAGYKCPRSVE 490
Query: 531 LWRKPFPLTSTGKIRRDEVR 550
PL++ GKI + ++R
Sbjct: 491 FRSDALPLSAAGKILKRDLR 510
>gi|333919932|ref|YP_004493513.1| feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482153|gb|AEF40713.1| Feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 514
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 252/559 (45%), Gaps = 59/559 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R A V TI G+R T + V LA GL I ++ GD V + ALNS
Sbjct: 2 YLTQGLHRWATATPGRVATICGDRSRTYAELSDRVSRLASGLRGIDIKDGDRVGVLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y+E + AV + ++ P+N RWS E + ++ + +L+ D+ +Q P
Sbjct: 62 DRYIESLFAVPWANAVLNPVNIRWSPAEIAYSLEDSQTRVLIVDDVFAPAVPAVQQI-YP 120
Query: 128 SLRWHVSLGSSSS-DFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGTTGS 185
+L + G + DF + L A+ S P + + + + +T GTTG+
Sbjct: 121 ALTTVIHAGDGPTPDFAISYEQLIAE--------SDPIADARRSGDELAGVFYTGGTTGA 172
Query: 186 PKGVVISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
PKGV++SH+ L+ +L +A +G LH AP+ H+ + + + G ++
Sbjct: 173 PKGVMLSHTNLVSAALGGLASGNFFRHGATPRSLHVAPMFHLADFAFFLMTSIAGGTNIA 232
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+P F+ + L + H VT + VP ++ LA ++ I G +
Sbjct: 233 VPMFDPQKVLGLIGTHEVTDTLLVPTMIQMLADHPSAPSF--DVSHLRTIAYGASPISPA 290
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
L+ A +P + AYGMTE S+ T + D ++ET +
Sbjct: 291 LLGRAKKVWPGVDFVQAYGMTELSALATILPAADHSIET-------------------RQ 331
Query: 363 VCVGKPAPHVELKVCS-DGSSH----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
G +P E+++ + DG+ VG IL RG VM YW Q + + + W+ T
Sbjct: 332 RSAGATSPTSEIRIAAEDGTDAPRGAVGEILVRGPQVMRGYW-QKPEETEEALRDGWMHT 390
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G +DD G +++V R I +GGENVY EVE L QHP + V+G+ + R E
Sbjct: 391 GDAGYLDDDGYLYIVDRLKDMIITGGENVYSSEVENALAQHPAVAACAVIGLPDERWGER 450
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V + ++++ L++H R + G+K PR V + + P
Sbjct: 451 VHAVV----------------VPAPQTTVTADELQEHTRAL-IAGYKVPR-SVSFAESLP 492
Query: 538 LTSTGKIRRDEVRREVMSH 556
++ GKI + +R V
Sbjct: 493 ISGAGKILKRSLRDTVQQQ 511
>gi|91975613|ref|YP_568272.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
gi|91682069|gb|ABE38371.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 518
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 236/554 (42%), Gaps = 68/554 (12%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L + A + + + G R T + + V LA G+R+GD VAI A N Y+E
Sbjct: 7 LRKATAFRADQTAIVAGERSFTHGELLDRVSRLASAFRAFGVRTGDRVAILAANGHPYVE 66
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
AV + GG+V P+N R++ E + P +LV D+S + ++
Sbjct: 67 CYFAVLWAGGVVVPVNSRFALAEMIEQVNDAEPSILVCDQS----FADIA---------- 112
Query: 133 VSLGSSSSDFVNKRDMLTADILKG-YSLRSLPFTHSWAPE----GAVIIC--FTSGTTGS 185
V + + S A L G Y S + G + C +T GTTG
Sbjct: 113 VQIAEACSCLTAIVATAAAAGLPGVYDYESAVANAEPCDDAGRGGEDLACLFYTGGTTGR 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH L V ++ G+ E V LH PL H+G + ++G HV IP+
Sbjct: 173 SKGVMLSHRNLWVNAVVTAMSFGFDESTVALHAGPLFHLGAGARVYTTSIMGGRHVVIPR 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F LEA+ +H VT VP ++ + L + S+K I G +P +++
Sbjct: 233 FAPTEVLEAISRHKVTVATFVPTMLGMILQLPDLDSY--DLSSLKLITYGASPMPEAVLQ 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E FP K +YGMTE S T + D LP A P +
Sbjct: 291 ECLRRFPSIKFGQSYGMTELSPVATILAPDD-------HLPSA-----PRRRLR----SA 334
Query: 366 GKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDT 417
G+P E+KV VG I+ RG VM+ YW KP ++ + W+ T
Sbjct: 335 GRPIVSAEVKVVDAEDRELKRGEVGEIVVRGPMVMMGYWR----KPELTAEALRGGWMHT 390
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD GS D G +++ R I SGGENVY EVE +L HP ++ V+GI + + E
Sbjct: 391 GDSGSFDADGYLYISDRIKDMIISGGENVYSIEVENAVLTHPEVMQCAVIGIPHPKWGEA 450
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V R LS+E L CR + +K+PR P P
Sbjct: 451 VHAVVVRRPGSS----------------LSAEELIAFCRSA-IADYKSPRSVEFRDDPLP 493
Query: 538 LTSTGKIRRDEVRR 551
L+S K+ + +R+
Sbjct: 494 LSSVNKVNKAALRQ 507
>gi|398866547|ref|ZP_10622035.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
gi|398240252|gb|EJN25938.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM78]
Length = 522
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 256/558 (45%), Gaps = 62/558 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I Q L R + ++ R T Q V LA L +G+ GD VA+ +LNS
Sbjct: 2 YITQGLHRHLQARPDATAVRFEGRSITYAQLGDRVARLACVLQGLGVNLGDRVAMLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y+E+ L V + ++ P+N RWS E ++ +L+ D++ + + A
Sbjct: 62 QRYIEYYLGVPWADAVLNPVNIRWSAAEIIYSLDDSETTVLIVDDTFKALGSRIAAEA-K 120
Query: 128 SLR--WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTG 184
++R + G + S +N +L A + P + ++ I +T GTTG
Sbjct: 121 TIRTVIYAGEGETPSGMLNYEALLEA---------AHPIEDARRCGDELLGIFYTGGTTG 171
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV++SHS + ++A + + YG D V+LH P+ H+ ++ A+ G HV +P
Sbjct: 172 FPKGVMLSHSNVAFSAMATLNMGTYGADAVFLHVMPMFHLADFAAMTALFFSGGTHVVLP 231
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSE 302
F ++ LE +EQ ++ ++ P ++ L + S+ I G +
Sbjct: 232 SFIPQTVLETIEQERISEILLAPTMIQMLLDCRDKHPQLASLELGSLTAIGYGASPITPV 291
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
L+ A +FP A YGMTE + T + + E Q G +
Sbjct: 292 LLDRAREAFPAAGFFQGYGMTELAPMATSL-----SAEYHCQAHHDSGKM---------- 336
Query: 363 VCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---- 413
G+PA VE+++ + VG I+ RG +VML Y L KP T E
Sbjct: 337 YSAGRPAICVEVRIVDVHDNEVPRGTVGEIIVRGPNVMLGY----LNKPQ-ETAEALRNG 391
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD G +D+ G +++ R I SGGEN+Y EVE + HP + I +GI ++
Sbjct: 392 WMHTGDGGYMDEDGFIYVCDRLKDMIVSGGENIYSAEVETAIASHPAVAQIAAIGIPCSK 451
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A + L+ +++ ++++ HCRE+ + G+K PR V +R
Sbjct: 452 WGETVHAVIVLKPG---------EAATGEDII-------AHCRER-IAGYKCPR-SVEFR 493
Query: 534 KPFPLTSTGKIRRDEVRR 551
PL+S GK+ + E+R+
Sbjct: 494 DALPLSSVGKVLKTELRK 511
>gi|192289994|ref|YP_001990599.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
gi|192283743|gb|ACF00124.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 519
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 238/552 (43%), Gaps = 65/552 (11%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L + A+ + + + +T R + + + V LAR G+ +G+ VAI A N Y+E
Sbjct: 7 LRKAASFRADDIALVTPERSFSHGEVLDRVARLARVFRRFGIEAGERVAILAANGNAYIE 66
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH-----TAIP 127
AV + GG+V P+N R+S E +T P +LV+D S L+L TA+
Sbjct: 67 CYFAVLWAGGVVVPINSRFSLAEMIEQVTDAEPTVLVSDRSFLDSALQLADACRGITAVI 126
Query: 128 SLRWHVSLGSSSSDF--VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC--FTSGTT 183
+ + D+ V + AD +G G + C +T GTT
Sbjct: 127 AAAPGAAGPPKLHDYEAVLADEKPCADAGRG---------------GDDLACLFYTGGTT 171
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G KGV++SH L V ++ G+ E V LH PL H+G + ++G HV I
Sbjct: 172 GRAKGVMLSHRNLWVNAVVTSLSFGFDETTVALHAGPLFHLGAGARVYTTSIMGGRHVVI 231
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P+F L A+ QH VT VP ++ + L + S+K I G +P +
Sbjct: 232 PRFSPNDVLAAISQHKVTVATFVPTMLGMILQLPDLDS--YDLSSLKLITYGASPMPEAV 289
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
++ FP + +YGMTE S T ++ D LP A N ++
Sbjct: 290 LQACLRRFPSIRFGQSYGMTELSPVATILSPAD-------HLPSAPQNRLRSA------- 335
Query: 364 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
G+P E+++ VG ++ RG VM+ YW Q V G W+ TG
Sbjct: 336 --GRPIVSAEVRIVDAEDRELKPGEVGEVVVRGPMVMMGYWKQPELTAHVLRGG-WMHTG 392
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D G D G +++ R I +GGENVY EVE + HP ++ V+GI +A+ E V
Sbjct: 393 DSGRFDADGYLYISDRIKDMIITGGENVYSIEVEHAIAAHPDVLQCAVIGIPHAKWGEAV 452
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V R L+++ L CR + +K+PR P PL
Sbjct: 453 HAVVVRRPGSS----------------LTTDELITFCRSV-IADYKSPRSIEFRDDPLPL 495
Query: 539 TSTGKIRRDEVR 550
+S KI + +R
Sbjct: 496 SSVNKINKAALR 507
>gi|91978279|ref|YP_570938.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
gi|91684735|gb|ABE41037.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 518
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 240/545 (44%), Gaps = 40/545 (7%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R V + + T+ R ++ + V LA GL G+ G+ VA+ +LNS
Sbjct: 2 NVTHGLRRALQVNPDGLATVFNGRRRNWREVGERVARLAAGLRASGVAEGERVALLSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE LA + GG++ PLN RWS E A+ R V LV D++ + AIP
Sbjct: 62 DRYLELYLAAGWCGGVIVPLNIRWSVLENEDALRDCRAVTLVVDKTFAA-TGAAIAQAIP 120
Query: 128 SLRW-HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
L + G + D++ S +P + A I +T GTTG
Sbjct: 121 GLALIYADDGDLPAGMQGYEDLIA-------SSEPIPDAMRKGDDLAGIF-YTGGTTGRS 172
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV++SH+ L+ +L + + VYLH AP+ H+ ++ ++L+ G +V +P F
Sbjct: 173 KGVMLSHTNLMANALNALGEGLFPGTSVYLHAAPMFHLANGAAMYSLLLSGGSNVMVPAF 232
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + ++ VT ++ VP M + KT+ S+K I G + ++
Sbjct: 233 TPEGVMATIQNERVTDVLLVPT-MIQMFVDHPALKTYD-LSSLKNITYGASPISEAVLAR 290
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A+ + P + AYGMTE S T + + E + Q
Sbjct: 291 ASAALPDVQFTQAYGMTELSPIATLLHWKEHIGEGKAKGRQRAAGCAALGCEVRIVDADD 350
Query: 367 KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
P PH VG I RG +VM+ YW++ G W+ TGD G +D+
Sbjct: 351 TPLPH----------GTVGEICVRGDNVMMGYWERPEETARALAGG-WMHTGDGGYMDEH 399
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V++V R I SGGENVY EVE + QHP + V+GI + E V A V +
Sbjct: 400 GFVFVVDRVKDMIISGGENVYSVEVENAVAQHPAVAQCAVIGIPHEAWGEQVHAVVVTKA 459
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++++ L HC+ + G+K PR + P PL+ GKI +
Sbjct: 460 G----------------ATVTADELIAHCKAL-IAGYKCPRSVDITETPLPLSGAGKILK 502
Query: 547 DEVRR 551
E+R+
Sbjct: 503 RELRQ 507
>gi|297616773|ref|YP_003701932.1| AMP-dependent synthetase and ligase [Syntrophothermus lipocalidus
DSM 12680]
gi|297144610|gb|ADI01367.1| AMP-dependent synthetase and ligase [Syntrophothermus lipocalidus
DSM 12680]
Length = 503
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 246/549 (44%), Gaps = 69/549 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGN--RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
++C +SR A+++ +S I G+ R + +F + V + L +G+ GD VAI
Sbjct: 4 NVCGLVSRNASLRPHSKAIICGDDGRIYSWSEFEKMVTRFSNALASMGVEKGDRVAIYLP 63
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA 125
NS +L AVA IG I P N + E + + + R +LV + YL
Sbjct: 64 NSPEFLFTYFAVARIGAIAVPFNILFRSGEITYVLNNSRAKVLVGASAETREYLAGAGGD 123
Query: 126 IPSLRWHVSLG---SSSSDF--VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+P L +++G + S DF + R D++ +P+ V I +TS
Sbjct: 124 VPHLEKVITVGERINGSLDFHALVSRAPEAFDVV------------DCSPDDIVSILYTS 171
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKG + SH L+ I+ + DV L P CHI + SA+ L VGAC
Sbjct: 172 GTTGQPKGAMHSHGNLMAIGTLSSRILRIDDQDVLLTPTPFCHICFVLSALGPLNVGACS 231
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
V + +F ALE + ++ VT VP + + L ++ S K G +P
Sbjct: 232 VTMRRFSPDKALELISRYRVTHFTGVPTMF--IYMLHHFEEDKYDLTSWKYAYAAGASMP 289
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+ +KE F + YG+TET+S++T+ N +
Sbjct: 290 VQYIKEVEEKF-GVEFAELYGLTETTSTVTY-----------------------NRIGHG 325
Query: 361 QGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+ VG A E+K+ + + VG IL +G V YW+ A GE W
Sbjct: 326 KKGSVGLAAEGTEVKLVDEAGNQARVGEVGEILVKGPGVFKGYWEMPEATREAFDGE-WY 384
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G D+ G +++VGR+ I GG NVYP E+E V+ QHP + VVG+ ++
Sbjct: 385 RTGDLGKYDEEGYLYIVGRKKEMIVCGGYNVYPREIEEVICQHPKVAEAAVVGVRDSARN 444
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E+ A VRL E + +E +ELL + C ++ + +K PR V +
Sbjct: 445 EIPKAFVRLNEGEEMTE---------QELL-------EFCAQR-MASYKVPRQ-VEFVPE 486
Query: 536 FPLTSTGKI 544
P + +GKI
Sbjct: 487 LPKSPSGKI 495
>gi|383830174|ref|ZP_09985263.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
gi|383462827|gb|EID54917.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora xinjiangensis XJ-54]
Length = 560
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 252/554 (45%), Gaps = 65/554 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+R+++V R T ++FV DV LA GLL G+ GD V I A N EW L A A
Sbjct: 37 ERDALVDHATGRRWTYREFVADVDALAVGLLARGVEKGDRVGIWAPNCPEWTLTQ-YATA 95
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYLELQHTAIPSLRWHVSLGS 137
IG I+ +N + E +T ML+ E S Y + P G+
Sbjct: 96 KIGAILVNINPAYRSHELEYVLTQAGISMLIAAKEFKTSDYEGMIREVRPRC------GA 149
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA---VIICFTSGTTGSPKGVVISHS 194
+ + + +A + G + + A GA + I +TSGTTG PKG +SH
Sbjct: 150 LTDVVIIGGEHWSALLDDGRKADPAALSRAQAALGADDPINIQYTSGTTGFPKGATLSHH 209
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSAL 252
++ + GY E+D P H G+ +A GAC V P F+ K L
Sbjct: 210 NILNNGFFVGELCGYTEEDRICIPVPFYHCFGMVMGNLAATTHGACMVIPAPSFDPKRTL 269
Query: 253 EAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATN 309
EAV+ TSL VP + +A+LA + G D S++ + G P E+MK+
Sbjct: 270 EAVQAERCTSLYGVPTMFIAELA-----DPDFDGYDLASLRTGIMAGSPCPVEVMKQVIE 324
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
A++ YGMTETS ++ T D ++E + VG+
Sbjct: 325 RMGMAEVAICYGMTETSP-VSTQTRADDSVER-------------------RVSTVGRVG 364
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+K+ + G + TRG VML YW+Q V W+ TGD+ +
Sbjct: 365 PHLEVKIVDPETGLTVPRGTPGELCTRGYSVMLGYWNQPEKTAEVIDAARWMHTGDVAVM 424
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G V + GR + GGEN+YP E+E L HP I+ V+G+ +A+ E ++A VR
Sbjct: 425 DDDGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMAWVR 484
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
+R+ + +++E LR C + L FK PR +V + FP+T TGK
Sbjct: 485 MRDGAE---------------PITAEALRAFCTGR-LAHFKIPR-YVHVVEDFPMTVTGK 527
Query: 544 IRRDEVRREVMSHL 557
IR+ E+R + + L
Sbjct: 528 IRKVEMREKAVELL 541
>gi|297189973|ref|ZP_06907371.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197718630|gb|EDY62538.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 515
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 256/557 (45%), Gaps = 69/557 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R + V TI G+R T Q+ + V LA GL +G GD + I ALNS
Sbjct: 2 YLTHILHRAVQQTPDDVATICGDRVRTWQESAERVARLAGGLRALGACEGDRIGILALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSD--SWYLELQHTA 125
+ Y E +LA + G V P+N RWS KE + ++ +L D++ + L +
Sbjct: 62 DRYHEVLLAAWWAGCAVNPVNIRWSAKEIAYSLADSSTRVLFVDDAFAPLTPALHAEWDG 121
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+ +L H G + + + +++ S L THS E A + +T GTTG
Sbjct: 122 VTTL-IHCGDGPTPQNMHSHEELI-------LSHEPLEETHSADGEPAGVF-YTGGTTGF 172
Query: 186 PKGVVISHS---ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
PKGVV+SH+ A ++ + A + +V G + AP+ H+ GLS A ++G HVF
Sbjct: 173 PKGVVLSHANIWASVLSAAATVRLVRQG--GRMMVAAPMFHLAGLSCWYAQSLIGGSHVF 230
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
+P FE + L+ +E+H T+ + VPA++ L RD S++ ++ G +
Sbjct: 231 VPAFEPAAVLQVIEKHRPTATLLVPAMVQMLVD----HPDAGSRDLSSLETLVYGAAPIS 286
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
L++ P+ L+ YGMTE + + + D G+L ++ G
Sbjct: 287 RALLERTHQVLPRTSLVQGYGMTEMAPCIAMLGADD---HNDGRLLRSAGRALAG----- 338
Query: 361 QGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VE+++ + VG I+ RG +M YW + G W+
Sbjct: 339 -----------VEVRIVDREGAEVPQGTVGEIVARGEGMMQGYWKKPHETAEALRGG-WM 386
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD G +D G ++LV R I +G ENVY EVE + QHP + V+G+ +A+
Sbjct: 387 HTGDAGYLDADGYLFLVDRVKDMIVTGAENVYSTEVENAVAQHPSVAACAVIGVPDAQWG 446
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR--LFVLWR 533
E V A V LR C ++E +R H + + G+KAPR FV
Sbjct: 447 ERVHAVVVLR-------PGCTA---------TAEEIRDHTKSL-IAGYKAPRSCEFV--- 486
Query: 534 KPFPLTSTGKIRRDEVR 550
PL++ GK+ + E+R
Sbjct: 487 DELPLSAAGKVLKRELR 503
>gi|254281943|ref|ZP_04956911.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR51-B]
gi|219678146|gb|EED34495.1| AMP-dependent synthetase and ligase [gamma proteobacterium NOR51-B]
Length = 517
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 245/556 (44%), Gaps = 68/556 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + R N + T R T +F +V L L +GL GD VAI +LNS+
Sbjct: 4 LSALIERAVRKNPNGLSTRFKGREQTYAEFKANVSRLGGALQTLGLEPGDRVAILSLNSD 63
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAI 126
YLE I +++ G + PLN RW+ E A+ + +R +L D S+ L+ A
Sbjct: 64 RYLEAIFGISWGGFCMVPLNTRWALPENEYAVGDSGVR-ALLFDDTFSEQAKALLESVAD 122
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS-WAPEGAVIICFTSGTTGS 185
S ++ G ++ R ++ S P T S + E I +T GTTG
Sbjct: 123 LSTVIYMDDGQCPPWALSYRQLIE---------DSPPVTASDRSGEDLAGIFYTGGTTGF 173
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV+ SH AL ++ + VYLH AP+ H+ MA ++ ACHV +P
Sbjct: 174 PKGVMQSHRALWASAIGCMPEFAMSRSSVYLHVAPMFHVADFVGTMASVIEAACHVMLPG 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
FE L+ + + ++ + VPA++ L T ++ +L G +P+ ++
Sbjct: 234 FEPSVVLKTLAKERISHSLMVPAMIKMLMNHPEASST--DVSHLQYVLYGASPMPAATLQ 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG--- 362
+ ++P+ LI AYG TE + ++ M H+ G
Sbjct: 292 QFMATWPEVDLIQAYGQTELAPVVSLMA---------------------ADAHRRGGHLL 330
Query: 363 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV---W 414
GKP ++++ + + G I+ G H ML YW+ KP + + W
Sbjct: 331 KSAGKPTVVSDVRIVDESGQDLPLGGRGEIIVTGPHTMLGYWN----KPEETAKALRDGW 386
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD G +DD G +++V R + +GGENV+ EVE ++ H + + V+GI +
Sbjct: 387 VYTGDAGYLDDEGFLYIVDRVKDMVVTGGENVFTTEVENAVISHDAVQDVAVIGIPHPEW 446
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A V L+ +E + HCR++ + G+K P+ +
Sbjct: 447 GEAVHAVVVLQPGAAVTEDE----------------IIAHCRDQ-IAGYKLPKSVSFRDE 489
Query: 535 PFPLTSTGKIRRDEVR 550
P PL+ GK+ + E+R
Sbjct: 490 PLPLSGAGKVLKRELR 505
>gi|441518909|ref|ZP_21000618.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454220|dbj|GAC58579.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 522
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 164/565 (29%), Positives = 252/565 (44%), Gaps = 76/565 (13%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A+I L R A+ + + G+ T + V + L E GL +GD+V + ALN
Sbjct: 3 ANISAALDRAVALFGDETAMVDGDHRWTYRDLDARVRSFDAALGEAGLIAGDVVGVLALN 62
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH--- 123
S +L L V G ++ +N R S E + I +L+ D++ +LE
Sbjct: 63 SRAHLVAWLGVPRSGRVLNEINTRLSETEIAYIIDDSATRLLLVDDA----FLETGRALR 118
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-------I 176
T PSL + G ++ D L ++ T +P+ ++ I
Sbjct: 119 TRCPSLDTLIYCGGGTA----PEDCLDFEVFT---------TSGRSPQPVIVGGDDVAGI 165
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV 236
+T GTTG PKGV++SH LI + + + Y D YLH P+ H+ +S +A+ V
Sbjct: 166 FYTGGTTGRPKGVLLSHDNLIANAKHALICLRYTHHDTYLHAGPMFHLADGASTVALTWV 225
Query: 237 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILN 294
G HV I F+ + LE VE+ VT + VP ++ L + + RD +++ +L
Sbjct: 226 GGTHVIIGGFDRELWLETVEREGVTRAMLVPTMLTML-----LSEPLGDRDLSTLQSVLY 280
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G +P+ L++ A + YGMTE + +TF+T D P+A
Sbjct: 281 GASPMPTALLRTAIQTL-GCDFCQVYGMTEAAPIVTFLTHEDHRDGIAATSPEA------ 333
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVS 409
Q + G+P V++ + S VG I RG +VM Y L KP
Sbjct: 334 ----QARLRSAGRPIVGVDVVIRDPQGSPLPTGDVGEITVRGMNVMQGY----LNKPD-E 384
Query: 410 TGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
T +V W TGD+G +D G +++V R I +GGENVY EVE L +HP +I +
Sbjct: 385 TADVLIDGWFHTGDMGYLDGSGYLYVVDRLKDMIITGGENVYSTEVENALYRHPDVIEVA 444
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V G + R E V A V LR EL+ E LR HCR+ + G+K
Sbjct: 445 VFGTPDPRWGEAVTAAVVLRRD-------------GDELV---EELRDHCRDL-IAGYKV 487
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVR 550
PR+ + + P + GKI + +R
Sbjct: 488 PRVIHIVDEALPKSGAGKILKRNLR 512
>gi|226187497|dbj|BAH35601.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 510
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 253/553 (45%), Gaps = 58/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + +++ + G R T Q V LA GL GD V I A N
Sbjct: 2 YLTQGLHRSVQREPDAIAVVDGQRQLTFAQLESRVARLAGMFTSYGLDRGDRVGILATNC 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+E+ A A+ + +P+N RWS E + I +L+ D LEL+
Sbjct: 62 LEYVEYSFACAWASMVASPVNNRWSPDEMAFHIEDAGITVLLVDGPRLPAALELRDRCA- 120
Query: 128 SLRWHVSLGSSS--SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
L + G++ D V D +A L G +P TH+ P+ ++ +T GTTG
Sbjct: 121 VLETVIVFGAADLPGDTV---DYDSALALHG----PIPDTHA-DPDALALLMYTGGTTGR 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDV---YLHTAPLCHIGGLSSAMAMLMVGACHVF 242
PKGV++S ++ L +A G GE ++ LH APL H+ + + + G+ HV
Sbjct: 173 PKGVMLSAGQILTSVLGVLA--GSGEPNLPGRSLHVAPLFHLAAFAGLVQASVTGSVHVL 230
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+ F + +E + + VT + VP ++ + L +T DS+ I G +P
Sbjct: 231 MGDFTVEKLVETIAEKEVTQSLLVPTMVQTM--LEYADRTGLPIDSLTSITYGASPMPEP 288
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
L++ P +L YGMTE + + T + D N H +
Sbjct: 289 LVRRLIERSPDLRLRQGYGMTELAPAATLLRDDDHR----------------NPDHPERL 332
Query: 363 VCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
VG+ APH E+++ + +G ++ RG++VM+ YW+ A+ + + W+ T
Sbjct: 333 RSVGRAAPHTEVRIVDATGTELPRGDIGEVVVRGSNVMMGYWNNE-AETAHAVRSGWMHT 391
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G +D+ G V+LV R I SGGENVY EVEA L QHPG+ V+G+ + + E
Sbjct: 392 GDLGFMDEHGYVFLVDRLKDMIISGGENVYSAEVEAALSQHPGVSSCAVIGVPDDKWGER 451
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V + E+N S + LR E+ + +KAPR V + P
Sbjct: 452 VHAVV-----VRTPENNS-----------SGDELRDFVGER-IARYKAPR-SVDFVDALP 493
Query: 538 LTSTGKIRRDEVR 550
L+ GKI + +R
Sbjct: 494 LSPVGKILKRTLR 506
>gi|398993082|ref|ZP_10696039.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398135676|gb|EJM24785.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 518
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 148/565 (26%), Positives = 255/565 (45%), Gaps = 76/565 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+I Q L R + N++ + T Q + V LA L +G++ GD VA+ A NS
Sbjct: 2 YITQGLHRHIQQRPNAIAVRDRGQALTFVQLGERVARLAAALQRLGVKPGDRVAMLAQNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+E+ LAV + ++ P+N RWS E ++ +L+ D D++ + + A+
Sbjct: 62 VRYIEYFLAVPWANAVLNPVNSRWSLSEILYSLDDSETSVLIVD---DAFMEQGKQIAVQ 118
Query: 128 SLR----WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGT 182
++ HV + + ++ ++ + P + A++ I +T GT
Sbjct: 119 AMTVERVIHVGIDETPPLMLDYETLIA---------ENPPVEDARRRGNALLGIFYTGGT 169
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TG PKGV++SH+ + S+A +A+ YG D V+LH P+ H+ + + + + G HV
Sbjct: 170 TGFPKGVMLSHNNVASSSMATVAMGSYGADAVFLHVMPMFHLADIWAMTGLFISGGSHVV 229
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD---------SVKKIL 293
+P F+ + L + + V ++ P T+I++ W+ S+ +
Sbjct: 230 LPAFDPATVLRTISEERVNQVLLAP-------TMIQMLLDWRDNHPQSAALDLGSLTTLY 282
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G + L+ A +FP+A+ YGMTE S P T L F +V
Sbjct: 283 YGASTITPALLDRACKAFPRAQFFQGYGMTELS----------PMAST---LSGEFHSVE 329
Query: 354 PNSVHQPQG--VCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKP 406
HQ G G+ + E+++ + VG ++ RG +VML YW + A
Sbjct: 330 ----HQASGKMYSAGQASVCTEVRIVDENDCEVPRGCVGEVIVRGPNVMLGYWKKPQAT- 384
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
V+ W+ TGD G +D G + + R I SGGEN+Y EVE + H + V
Sbjct: 385 EVALKNGWMHTGDGGYMDADGFIHICDRLKDMIISGGENIYSAEVETAIASHQAVAQCAV 444
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+GI + + E V A + L+ +++ D + HCRE+ + G+K P
Sbjct: 445 IGIPSEKWGEAVHAVIVLKPD---ADAGFD-------------AILAHCRER-IAGYKCP 487
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRR 551
R +R PL+ GK+ + E+R+
Sbjct: 488 R-SAEFRAVLPLSGVGKVLKTELRK 511
>gi|311107966|ref|YP_003980819.1| feruloyl-CoA synthetase 2 [Achromobacter xylosoxidans A8]
gi|310762655|gb|ADP18104.1| feruloyl-CoA synthetase 2 [Achromobacter xylosoxidans A8]
Length = 510
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/510 (28%), Positives = 248/510 (48%), Gaps = 68/510 (13%)
Query: 49 LLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVML 108
L + G+ GD VA + N Y+ WILA ++G V PLN RWS E ++A+ P +L
Sbjct: 43 LRDHGVLPGDRVAFWSANGADYVSWILACWWLGAAVVPLNTRWSGAELAQALADCSPRLL 102
Query: 109 VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 168
+ DE T P + ++ D + L+A++L+ ++ ++
Sbjct: 103 LVDE-----------TMAPRM--------AAIDMPAGAEPLSAEVLEAHATAAVAQEDVR 143
Query: 169 AP-EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 227
A + I FT GTTG+PKG +++H+ L ++A++A V D L APL H+ GL
Sbjct: 144 AGGDTLAAILFTGGTTGAPKGAMLTHANLWSAAVARMATVPTSPDSHTLLVAPLFHVAGL 203
Query: 228 SSAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+ + GA V IP+ F+ ++ L+A++ VT ++ VP+++ L + W G
Sbjct: 204 GRLIGQFVAGAS-VAIPRGFQPRAVLQALQDDGVTEVLLVPSMIQMLLDEPGFAQYWLG- 261
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
V++++ G + L+ A +FP+A+ + AYGMTET++++ + + G
Sbjct: 262 -GVQRVIWGASPISRALLDRALAAFPQAEFVHAYGMTETAATVAI----NAEVREGGART 316
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQ 401
++ G+PA VE ++ + DGS VG + RG VM YW++
Sbjct: 317 ES----------------AGRPAIGVETRILAPDGSEAAPGAVGELAVRGPMVMQGYWNR 360
Query: 402 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
+ + WL TGD D+ G +++V R I SGGEN+Y EVE VL +HP +
Sbjct: 361 -PEETQRAFDHGWLLTGDAARQDEDGYLYIVDRLKDMIVSGGENIYGAEVEGVLARHPLV 419
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
V+G+ +AR E V A + R + + ++ L +HCR+ L
Sbjct: 420 ARCAVIGVVHARWGEAVHAVIVPRPG----------------MGVDADSLDRHCRQL-LA 462
Query: 522 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
FK P+ + + P+++ GK+ + +R+
Sbjct: 463 AFKCPKTYEFLNE-LPMSAAGKVLKSALRQ 491
>gi|317123519|ref|YP_004097631.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
gi|315587607|gb|ADU46904.1| AMP-dependent synthetase and ligase [Intrasporangium calvum DSM
43043]
Length = 543
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 252/549 (45%), Gaps = 69/549 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R ++V ++ R T + DV LAR LL IG+++GD V I A N SEW L A A
Sbjct: 38 DREALVDVSQGRRWTYAALLADVDRLARALLAIGVKTGDRVGIWAPNCSEWTLVQ-YATA 96
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYL-----ELQHTAIPSLRWHV 133
+G I+ +N + E + LV ES S E++H + SL +
Sbjct: 97 KMGAILVNINPAYRAHELHYVLGQAGISTLVAAESFKSSNYREMIDEVRHD-VASLERVI 155
Query: 134 SLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+G+ D + + D ++A L G + P + I +TSGTTG PKG +S
Sbjct: 156 YIGTDDWDSTLAEADRVSATELSG-------IQAALKPSDPINIQYTSGTTGFPKGATLS 208
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ + Y E D P H G+ +A GAC V P F+ +
Sbjct: 209 HRNILNNGFFVGELCRYTEADRVCIPVPFYHCFGMVMGNLACTTHGACMVIPAPGFDPTA 268
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEAT 308
L+AV+ TSL VP + +L ++ D SV+ + G P+ LMK+
Sbjct: 269 TLKAVQDEQCTSLYGVPTMFIAEWSL----PSFADYDISSVRTGIMAGSPCPAPLMKQLI 324
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
S + I YGMTETS P + N T ++ Q G VG+
Sbjct: 325 ASGIEEMTI-CYGMTETS-------------------PVSTQNRTDDTFEQKTGT-VGRV 363
Query: 369 APHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+K+ G+ G LT+G VML YW+Q K + + + W+ TGD+G
Sbjct: 364 HPHLEIKIVDPGTGETVRRGQAGEFLTKGYSVMLGYWEQ-PDKTAEAIEDGWMHTGDLGV 422
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+ D G V + GR + GGENVYP E+E L HP I+ V+G+ +++ E + A V
Sbjct: 423 MHDDGYVEITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDSKYGEELCAWV 482
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
R+RE + L++E LR+ C + L +K PR +V FP+T TG
Sbjct: 483 RMREGAE---------------PLTAEALREFCTGQ-LAHYKIPR-YVEVVDEFPMTVTG 525
Query: 543 KIRRDEVRR 551
KIR+ E+R
Sbjct: 526 KIRKVEMRE 534
>gi|421745630|ref|ZP_16183477.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
gi|409775909|gb|EKN57351.1| AMP-dependent synthetase and ligase [Cupriavidus necator HPC(L)]
Length = 519
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 235/511 (45%), Gaps = 51/511 (9%)
Query: 46 ARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRP 105
A L G+ SGD VA+ A N + + ++A + G + PLN RW+ E A+
Sbjct: 44 AAALKRHGIGSGDRVALLAQNGDGLIAMLVACWWRGAVACPLNTRWTVHELRHAVDDCGA 103
Query: 106 VMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT 165
+L+ D + EL A V + AD L T
Sbjct: 104 RLLLPDGQLTAMAEELGDLAT----------------VIPIETFLADAEAADGFEPLDDT 147
Query: 166 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 225
+ A I+ +T GTTG KGV++SH+ S+A+ A + D V L APL H+
Sbjct: 148 RTGGDALAAIL-YTGGTTGRAKGVMLSHANFWAASIARAAELNNAPDSVSLLVAPLFHVA 206
Query: 226 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 285
GL + L+ G V +P+F + L A+E H ++ +I VP ++ L L
Sbjct: 207 GLGRLIGQLIAGGSCVTLPQFRADILLSAIETHRISDIIVVPTMLQSL--LDHPGFDAAR 264
Query: 286 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 345
S+ +I G +P +L+ A ++P A+ AYGMTET++++
Sbjct: 265 LQSLNRIAFGAAPMPPDLLARALEAWPNAEFFQAYGMTETAAAVCIN------------- 311
Query: 346 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWD 400
P A N P + + VG+ E++V + VG I+ RG VM YW+
Sbjct: 312 PPA--NHRPGAGAERHRHSVGRAGLGAEIRVIDPQGNEVPRGTVGEIVVRGPMVMRGYWN 369
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
Q A + + + WL TGD G +D+ G +++ R I SGGEN+Y EVE L HP
Sbjct: 370 QPDAT-AQALRDGWLHTGDGGWMDEDGYLFIADRLKDMIISGGENIYSAEVETALRGHPR 428
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
+ V+G+ +AR E V A V + +S + + + LS E L Q CRE+ L
Sbjct: 429 VAQAAVIGVPDARWGERVHAVVVVEDSASLAPPD--------DAALSDE-LTQWCRER-L 478
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
G+K PR F + PL++ GK+ ++E+R+
Sbjct: 479 AGYKCPRSFA-YVDGLPLSAAGKVLKNELRQ 508
>gi|389876831|ref|YP_006370396.1| putative long-chain-fatty-acid CoA ligase [Tistrella mobilis
KA081020-065]
gi|388527615|gb|AFK52812.1| putative long-chain-fatty-acid CoA ligase [Tistrella mobilis
KA081020-065]
Length = 519
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 152/559 (27%), Positives = 252/559 (45%), Gaps = 69/559 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I L R A+ R+ TI R + + V +A +G+ GD VA+ LNS+
Sbjct: 3 ITSGLRRTIAIARDRTSTICAGRTRSWGETADRVARIAGAFRALGVEDGDRVALLTLNSD 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
Y+E+ LA + G ++ PLN RWS E + AI +L+ D++ + E+ +
Sbjct: 63 RYIEFYLATPWAGAVIVPLNIRWSRAENADAIEDCGASLLIVDDA----FAEMGRAIAAA 118
Query: 129 LRWHVSL-----GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA------VIIC 177
+L G + D + D++ H P+ I
Sbjct: 119 SGSQFALIYAGDGPAPEDMPHIEDLIR--------------NHDPIPDAERSGDDLFGIF 164
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 237
+T GTTG KGV++SH +I SL +A + + VYLH+AP+ H+ ++ ++LM G
Sbjct: 165 YTGGTTGRSKGVMLSHENIISNSLHSLAEGLFPDGTVYLHSAPMFHLADGAATFSLLMKG 224
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
HV +P F + ++A+++H VTS + VP ++ L + S+K+I+ G
Sbjct: 225 EPHVIVPSFTPEGVMKAIQEHKVTSALLVPTMIQMLVDHPAIGNY--DLSSMKRIIYGAA 282
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA-FGNVTPNS 356
+ ++ AT P + + AYGMTE S T + PQ G
Sbjct: 283 PITEAVLDRATAKLPGVEFMQAYGMTELSPVATLLH------------PQEHVGESRAKG 330
Query: 357 VHQPQG-VCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV-- 413
H+ G +G V+ VG ++ RG +VM+ YW+ +P + +
Sbjct: 331 RHRSAGRAVIGCEVRIVDADDRPVPVGEVGEVVVRGRNVMMGYWE----RPEETAKAIVD 386
Query: 414 -WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD +D+ G +++V R I SGGENVY EVE V+ +HP + V+GI +
Sbjct: 387 GWMHTGDGARMDEDGFIYIVDRVKDMIISGGENVYSLEVENVVARHPDVAQCAVIGIPDE 446
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
E+V A V + D +E++ +QH + G+K PR +
Sbjct: 447 HWGEIVHAVVVPK---------SDARPTAEEIIA---FCKQH-----IAGYKCPRSVEIR 489
Query: 533 RKPFPLTSTGKIRRDEVRR 551
+P P++ GKI + ++R+
Sbjct: 490 DEPLPMSGAGKILKRDLRK 508
>gi|300788951|ref|YP_003769242.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384152427|ref|YP_005535243.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|399540833|ref|YP_006553495.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299798465|gb|ADJ48840.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340530581|gb|AEK45786.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|398321603|gb|AFO80550.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 501
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 251/548 (45%), Gaps = 76/548 (13%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA 76
AA + VV G R TG + + V LA GL ++G+ GDIVA+ N +LE + A
Sbjct: 12 AAHHPDQVVLSQGERRLTGHELDERVNALAAGLRDLGVGPGDIVALLLYNHLEFLEAVFA 71
Query: 77 VAFIGGIVAPLNYR-----WSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS--L 129
+ +G PLNYR W F ++ +I L E +D A+P+ L
Sbjct: 72 LNRLGAAFLPLNYRLSPVEWEFILGHASVVAI----LTEPEFAD---------ALPTQGL 118
Query: 130 RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGV 189
+ + LG + + D++TA + +P A + ++ +TSGTT PKGV
Sbjct: 119 KHRILLGERKPGWQSYDDLVTA-----HHGDRVPLADVGAHDLQRLM-YTSGTTSRPKGV 172
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFES 248
I+H L+ ++LA I G G DD L PL H+GGL + L G + KF++
Sbjct: 173 PITHHNLLFKNLAHIVEFGLGRDDRTLVCGPLYHVGGLDLPGLGTLHAGGSLHLVRKFDA 232
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
++ +E+ T++ P++M + L +++ + S++ I+ GG +P L++
Sbjct: 233 AEVVDLIERERPTNIWLAPSMMNAILQLPGLRE--RDTSSLRFIIGGGEKMPVPLVQRIQ 290
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+FP A AYG+TET + TF D L G VG+P
Sbjct: 291 EAFPTAWFADAYGLTETVAGDTFNDA-DHVLRKVG--------------------SVGRP 329
Query: 369 APHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGS 422
H+ +++ + + V G I G V YW D+ ++ G W TGD+G
Sbjct: 330 VQHLRVRIVDEHDAEVPTGQLGEITLAGPKVFSGYWRDEEATTKAIRDG--WFHTGDVGR 387
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D+ G +++ R+ I SGGEN+ EVE VL +HP ++ VVG+ + R E+ A V
Sbjct: 388 LDEDGYLYVEDRKKDMIVSGGENIATPEVERVLYEHPDVVEAAVVGLPHERWGEVPQAFV 447
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
R S D + L HCRE+ L FK P + + P T +G
Sbjct: 448 VARPG-----SGLDAVT-----------LVAHCRER-LAKFKVP-AEIRFVDELPRTPSG 489
Query: 543 KIRRDEVR 550
K+ + ++R
Sbjct: 490 KVLKRDLR 497
>gi|453072992|ref|ZP_21976005.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452756762|gb|EME15170.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 503
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 255/554 (46%), Gaps = 67/554 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
H+ L R + + +T+ +R Q + V LA L E G+ GD V+I A NS
Sbjct: 2 HLTHLLHRAVQQQPHRPLTVCEHRERNAPQIAKRVARLAGALRERGVGPGDRVSILAFNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E ++A +IG +V +N S +E + A+T + ++ DE L T +
Sbjct: 62 DRYFESLMATWWIGAVVNLVNRHGSVREVTDAVTGVGSAFVLVDEEC-----RLLVTGLD 116
Query: 128 SLRWHVSLGS--SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+ V +G + + D+ I++G + + + + +T GTTG+
Sbjct: 117 ATVTLVYIGDEPAPAGMAGFEDL----IVEGPEVEDV----RAGGDTLAALIYTGGTTGT 168
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGED----DVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
PK V+ SH +L S A + G+ + L APL HI L MA +VG V
Sbjct: 169 PKAVMHSHRSL---STALLGGTGFARSCEIGGITLVMAPLFHIAALLGMMAQTVVGGTVV 225
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
F +F++ L + VT++ +P+++ L T SVK I+ G +P+
Sbjct: 226 FANRFDAGDVLGLIAGRRVTTMTAIPSMLQMLYNHPAFSDT--DVTSVKSIVYGAAPMPA 283
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
+++ A + FP A + YGMTET+ ++ + G +A G P+
Sbjct: 284 AILERAMSRFPNANFVQGYGMTETAVIVSLL----------GSDHRAGG---------PR 324
Query: 362 GVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ + H E+ + + V G I+TRG H+ML YW++ G WL
Sbjct: 325 LRSAGRASLHAEIIIADREGNEVPRGTVGEIVTRGEHIMLGYWNRPEETAEALRGG-WLH 383
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +DD G +++V R I +GGENVY EVE + HP ++ V+G+ +A+ E
Sbjct: 384 TGDLAYMDDEGYIFIVDRAKDMIITGGENVYSAEVEDAVANHPAVLRCAVIGLPDAQWGE 443
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A V L N +L ++E +R+H + + + G+KAPR V + +
Sbjct: 444 RVHAVVVL----------------NPQLHATAEEIREHVKTQ-IAGYKAPRT-VAFVEAL 485
Query: 537 PLTSTGKIRRDEVR 550
T+TGK + +R
Sbjct: 486 TTTATGKTDKRSLR 499
>gi|367468134|ref|ZP_09468029.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
gi|365816794|gb|EHN11797.1| Long-chain-fatty-acid--CoA ligase [Patulibacter sp. I11]
Length = 530
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 158/565 (27%), Positives = 248/565 (43%), Gaps = 72/565 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDI--------- 59
I Q ++R A + + + +R T ++ LA L+E+G+RSGD
Sbjct: 3 ITQTITRSARLDPDGIAIRYLDRERTHRELADRSARLAGALVELGVRSGDPAGDGDARYG 62
Query: 60 --VAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDS 116
VA LNS+ YLE+ L V + GG+ P+N R + E +T S V+LV D +
Sbjct: 63 TRVAFLGLNSDRYLEFFLGVPWAGGVFVPVNVRLAPPEIVYWLTDSGAEVLLVDDAFAPV 122
Query: 117 WYLELQHTAIPSLRWHVSL---GSSSSDFVNKRDMLTADILKGYSLRSLPFT-HSWAPEG 172
L+H +PSLR HV G + ++ D++ + P +
Sbjct: 123 VPTLLEH--VPSLR-HVIFAGEGETPEGLLSYEDLVAG---------AAPIEPRDRGGDE 170
Query: 173 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA 232
+ +T GTTG KGV++SH+ L+V +L + +G YLH P+ H+ +
Sbjct: 171 LAGLFYTGGTTGRSKGVMLSHTNLLVDALHGLPTLGITRSSRYLHVGPMFHLANGAGMFG 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVK 290
L+ GA HV + +F + A+E+H VT + VP ++ L V + D S++
Sbjct: 231 ALVAGAGHVIVDRFTPEGTAVAIERHGVTHALLVPTMIG----LFVVDPAAREHDLSSLQ 286
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
+L GG + ++ A P L+ AYG +E LT ++ E P G
Sbjct: 287 GLLYGGSPMTESVIAAAQELLPGTGLVQAYGQSEAGPILTMLSAERHVFEGPLAGKTRSG 346
Query: 351 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAK 405
G+P V++ + D + VG I RG +VM YW+ +
Sbjct: 347 ---------------GEPVIGVDVAILDDDGNELPRGDVGEICGRGDNVMAGYWN-LPDQ 390
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ + WL TGD G +DD G V++V R I +GGENVY EVE + HP ++
Sbjct: 391 TAKALRHGWLYTGDAGYMDDDGFVFVVDRLKDMIVTGGENVYTAEVENAIAAHPEVVECA 450
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V+GI + + E V A V +RE L E L HC++ + +K
Sbjct: 451 VIGIPSEKWGEQVHAVVAVREGSA----------------LDGEALIAHCKQL-IANYKC 493
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVR 550
PR + P + GKI + +R
Sbjct: 494 PRSVEIRTGELPRSGAGKILKTTLR 518
>gi|357040353|ref|ZP_09102141.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356706|gb|EHG04490.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 516
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 149/542 (27%), Positives = 256/542 (47%), Gaps = 58/542 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ + V R+ G+ V L+ E+G+R GD VA+ N YLE LAV
Sbjct: 16 KKTAVFFRETRYTFGE-LKNRVCRLSNAFWEMGIRKGDRVALLLENCHQYLELYLAVTSK 74
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSLGS 137
G I PLNYR +A R +T I V S YL + + + +++++S+
Sbjct: 75 GAIAVPLNYR----QAGRELTYIINDAQVKAVVSCKAYLPVLNAIEKDLQGVKYYISI-D 129
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
++ ++TA + P T S + +TSGTTG PKGV+++H +I
Sbjct: 130 GGEKVLDYEQLITA----ASAAEKAPVTVS--DSDVAYLMYTSGTTGYPKGVILTHKNII 183
Query: 198 VQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVE 256
+ S+ Y E DDV ++ APL H G S +M GA ++ + KF +S LE ++
Sbjct: 184 MTSMNLSWSYHYIEPDDVTINFAPLFHSGQASISMCHFYSGATNIIMEKFNPQSILETIQ 243
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ VT+ P ++ L + S+++I G +P L+KE + K
Sbjct: 244 KEKVTNFWAAPTMINMLIKYPEFARY--DLSSLRQIAYSGAPMPVPLLKECL-ALIGPKF 300
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
I YG+TE LT + D E P + + G+V GK + +++V
Sbjct: 301 IQMYGLTEAGPHLTSLAQEDHVAEGPPEKVRRLGSV-------------GKEVLNTQVRV 347
Query: 377 CSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVST-GEVWLDTGDIGSIDDGGNVW 430
++ VG I+ +G ++M YW+ L K + + WL TGD+ ++D+ G ++
Sbjct: 348 VNERGEDVAPGEVGEIIGKGDNIMQGYWN--LPKATAEALRDGWLYTGDLATVDEDGYIY 405
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+V + I SGGEN+YP+E+E V+ +HP ++ V+G+ + E+V+A + L++ Q
Sbjct: 406 IVDCKKDMIISGGENIYPKELENVIYEHPAVLEAAVIGLPDTHWGELVMALIVLKQGQQV 465
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+E E + ++C+ KNL +K P+ V + P +GK+ + +R
Sbjct: 466 TE----------------EEIIEYCK-KNLASYKKPKR-VKFIDELPKNPSGKVLKTVLR 507
Query: 551 RE 552
++
Sbjct: 508 QK 509
>gi|441502995|ref|ZP_20985002.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
gi|441429211|gb|ELR66666.1| Long-chain-fatty-acid--CoA ligase [Photobacterium sp. AK15]
Length = 525
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 267/574 (46%), Gaps = 84/574 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R A K N V I G+ T +F +A L+ G++ GD VA+S N
Sbjct: 3 NLAAALQRNAKCKPNKVALICGDAQFTYAEFDHIASQVAGALIASGIQPGDRVALSCPNI 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
++ + GG+V PLN FKE R + ++S ++ + T P
Sbjct: 63 PFFPFIYYGIQKAGGVVVPLNVL--FKE--------REIKYHLEDSGAKFFFCFEGT--P 110
Query: 128 SLRWHVSLGSSSSDFVNKRD---MLTADILKGYSLRSLP----FTHSWAP---------E 171
L G ++ + V + ++T D LK S +P H P +
Sbjct: 111 ELPM-AEAGIAAFNQVESCEHMAVITRD-LKQLSFNGMPTFSALIHGAEPVQDYVAREAD 168
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSL-AKIAIVGYGEDDVYLHTAPLCHIGGLSSA 230
+I +T+GTTGSPKG V++ S ++ ++ A IVG G +DV+L PL H G ++
Sbjct: 169 DTAVILYTAGTTGSPKGAVLTQSNMVCNAMVAANLIVGNG-NDVHLTVLPLFHSFGQTAH 227
Query: 231 M-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR--- 286
M +M GA + IP+F+ + L +EQH T VP + + ++ K T G
Sbjct: 228 MNTAVMCGATLLMIPRFDPQVVLAQIEQHKATIFAGVPTMYIGM---LQAKATLSGEKNY 284
Query: 287 --DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 344
S++ ++GG LP+E+++ F ++ YG++ETS F L PG
Sbjct: 285 DISSLRLAISGGAPLPAEVIRSFEAEF-DIPILEGYGLSETSPVACFHHL--DAERIPGS 341
Query: 345 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW 399
VG+P VE++V + V G IL RG +VM Y
Sbjct: 342 --------------------VGQPVQGVEIRVVDEQGKTVETGQDGEILIRGHNVMKGYL 381
Query: 400 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 459
++ + + S + WL TGDIG D GN+++V R + GG NVYP E+E VL+ HP
Sbjct: 382 NR-AEETASSLKDGWLHTGDIGRFDQAGNLFVVDRLKDMVIRGGFNVYPREIEDVLMTHP 440
Query: 460 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 519
G+ V+GI + ++ E + A V L+++ + +E +Q L+ S+
Sbjct: 441 GVAMAAVIGIPDEKVGEEIKAYVVLKDNGESAEKPDEQC-----LIEWSKT--------Q 487
Query: 520 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
L +K PR + +R+ P+++TGKI + E++ E+
Sbjct: 488 LASYKYPRQ-IEFRQQLPISATGKILKKELKAEL 520
>gi|229491800|ref|ZP_04385621.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
gi|229321481|gb|EEN87281.1| feruloyl-CoA synthetase [Rhodococcus erythropolis SK121]
Length = 503
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 255/554 (46%), Gaps = 67/554 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
H+ L R + + +T+ +R Q + V LA L E G+ GD V+I A NS
Sbjct: 2 HLTHLLHRAVQQQPHRPLTVCEHRERNAPQIAKRVARLAGALRERGVGPGDRVSILAFNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E ++A +IG +V +N S +E + A+T + ++ DE L T +
Sbjct: 62 DRYFESLMATWWIGAVVNLVNRHGSVREVTDAVTGVGSAFVLVDEEC-----RLLVTGLD 116
Query: 128 SLRWHVSLGS--SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+ V +G + + D+ I++G + + + + +T GTTG+
Sbjct: 117 ATVTLVYMGDEPAPAGMAGFEDL----IVEGPEVEDV----RAGGDTLAALIYTGGTTGT 168
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGED----DVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
PK V+ SH +L S A + G+ + L APL HI L MA +VG V
Sbjct: 169 PKAVMHSHRSL---STALLGGTGFARSCEIGGITLVMAPLFHIAALLGMMAQTVVGGTVV 225
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
F +F++ L + VT++ +P+++ L T SVK I+ G +P+
Sbjct: 226 FANRFDAGDVLGLIAGRRVTTMTAIPSMLQMLYNHPAFSDT--DVTSVKSIVYGAAPMPA 283
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
+++ A + FP A + YGMTET+ ++ + G +A G P+
Sbjct: 284 AILERAMSRFPNANFVQGYGMTETAVIVSLL----------GSDHRAGG---------PR 324
Query: 362 GVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ + H E+ + + V G I+TRG H+ML YW++ G WL
Sbjct: 325 LRSAGRASLHAEIIIVDREGNEVPRGTVGEIVTRGEHIMLGYWNRPEETAEALRGG-WLH 383
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +DD G +++V R I +GGENVY EVE + HP ++ V+G+ +A+ E
Sbjct: 384 TGDLAYMDDEGYIFIVDRAKDMIITGGENVYSAEVEDAVANHPAVLRCAVIGLPDAQWGE 443
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A V L N +L ++E +R+H + + + G+KAPR V + +
Sbjct: 444 RVHAVVVL----------------NPQLHATAEEIREHVKTQ-IAGYKAPRT-VAFVEAL 485
Query: 537 PLTSTGKIRRDEVR 550
T+TGK + +R
Sbjct: 486 TTTATGKTDKRSLR 499
>gi|339328651|ref|YP_004688343.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
gi|338171252|gb|AEI82305.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
Length = 528
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 262/556 (47%), Gaps = 63/556 (11%)
Query: 12 CLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWY 70
L R A++ + I R T + +D +LA GLL++G GD + + LN EW
Sbjct: 13 ALKRNVALQPDHPALIYQGRAITFSELDRDSDHLACGLLDLGFGKGDRLGMLGLNQPEWL 72
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAIT--SIRPVML--VTDESSDSWYLELQHTAI 126
L + LA A IG I+ L+ R+ E + +R ++ V + Y +
Sbjct: 73 LAY-LAAAKIGAILVGLSVRYRDSEIEYIVNHAKVRAIIAPAVVGDMDYVAYFASMGARL 131
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
P+++ + +GSS+ + D+L A ++ + S PE +++ +TSGTTG P
Sbjct: 132 PTVQHYFFMGSSAVPADQRFDLLLATVVDQARIDRA--QSSIVPEDPLVLIYTSGTTGRP 189
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK 245
KG +I+H + + ++A+ + +G +D+ + PL H+GGL+ +AML+ G + IP
Sbjct: 190 KGALITHRSQLASAVAQCSHLGLRSNDLQMLALPLNHVGGLTCGFLAMLLGGGTSLLIPT 249
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWK-GRDSVKKILNGGGGLPSELM 304
F K + + T ++ VP + L+R + + R V+ ++ GG L+
Sbjct: 250 FSPKQVISDMLSFPPTIVVGVPTMHT---LLLREEAIGQLDRQRVRLVITGGANADPNLL 306
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
++ +FPKA +++ YG++ETS + M+ +D + +
Sbjct: 307 QQLQQTFPKASVMNLYGLSETSGA-ALMSPWDSDFDAIVR-------------------T 346
Query: 365 VGKPAPHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTG---EVWLD 416
VG+P P VEL++ DG + G + RG + Y D P+ S + W+
Sbjct: 347 VGRPLPGVELRIVRPDGRDAATGEAGELWIRGELTVAGYIDM----PTESANAFFDGWVR 402
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+G DD G V L+GR GG NVYP EVE VLL+HP ++ + +G+ + L E
Sbjct: 403 TGDLGCRDDEGLVTLMGRSKEMYVQGGFNVYPIEVENVLLRHPDVLMVAGIGVPDPVLGE 462
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
+ V + Q S+E L +CR + L +K PR +L+R
Sbjct: 463 VGHYYVVPKPGSQP----------------SAESLIDYCR-RLLADYKVPRQ-ILFRDSL 504
Query: 537 PLTSTGKIRRDEVRRE 552
P+T TGKI + + E
Sbjct: 505 PMTPTGKIVKARLLEE 520
>gi|319792929|ref|YP_004154569.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315595392|gb|ADU36458.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 519
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 157/537 (29%), Positives = 242/537 (45%), Gaps = 81/537 (15%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
+++ + V LA L ++G+R+GD VA+ +LNS YLE+ +AV + GG++ P N RWS E
Sbjct: 30 REYGERVARLAGALQKLGMRTGDRVAMLSLNSARYLEYQMAVPWGGGVLNPCNIRWSAAE 89
Query: 96 ASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK 155
++ +L+ DE+ +++ A SLR + G + L A +
Sbjct: 90 ILYSLEDSGSTILLVDETFRPMVEQMREQAT-SLREVIYCGDGA---------LPAR-MH 138
Query: 156 GYSLRSLPFTHSWAPEGA------VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY 209
GY +L T + P+ A I +T GTTG PKGV++SH+ + LA A
Sbjct: 139 GYE--ALLDTAAPVPDAARRDEDLAGIFYTGGTTGFPKGVMLSHTNMGSSGLALHAERLA 196
Query: 210 GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI 269
YLH AP+ H+ + A + G H IP F + L A+E+ VT ++ VP +
Sbjct: 197 PPGGCYLHAAPMFHLADMGLATPHWLEGNTHSIIPMFSPEGVLHAIEKDRVTHILLVPTM 256
Query: 270 MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L+ + RD S+K I G + ++ A ++FP + AYGMTE S
Sbjct: 257 ---IQMLVDHPAMREPRDLASLKCIAYGASPISESVLNRAMDAFPGVDFVQAYGMTELSP 313
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-------DG 380
+ P H +G +GK C+ DG
Sbjct: 314 ---------------------LATINPARNHTAEGRKLGKLRSAGRASYCTEVRIVDADG 352
Query: 381 SSH----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVG 433
+ VG I RG +VM YW+ KP + V W+ TGD +DD G V++V
Sbjct: 353 AEAPRGTVGEIAVRGPNVMQGYWN----KPEQTAAAVRDGWMHTGDGAYMDDDGYVFVVD 408
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R I SGGEN+Y EVE + QHP + V+GI + E V A + L+
Sbjct: 409 RLKDMIISGGENIYSAEVENAITQHPAVAACAVIGIPSEEWGEAVHAALVLKPG------ 462
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
Q ++ EL+ HC+ + G+K PR + PL+ GK+ + ++R
Sbjct: 463 ---QGIRDDELI-------AHCKTL-IAGYKCPRSVAIV-DALPLSGAGKVLKTKLR 507
>gi|108798485|ref|YP_638682.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119867586|ref|YP_937538.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
gi|108768904|gb|ABG07626.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119693675|gb|ABL90748.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 515
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 155/560 (27%), Positives = 255/560 (45%), Gaps = 73/560 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + T+ G R T Q LA +G+RSGD VA+ A N
Sbjct: 2 YLTQALHRAVQQTPDLPATVFGERVRTWAQTADRAARLASAFQGLGVRSGDRVALLAQNC 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y +++ AV + G+ P+N RWS E + ++ ++LV D+ EL+ A P
Sbjct: 62 DAYHDFLFAVPWADGVAVPVNTRWSVHEIAFSLEDAGALVLVVDDVFLDMVEELRELA-P 120
Query: 128 SLRWHVSLGSSS--SDFVNKRDMLTA-----DILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+++ ++ G + ++ D++TA D +G + I +T
Sbjct: 121 TVQAYIHAGDRARPEGVLDFEDIITAHDPIEDARRG-------------GDALAAIYYTG 167
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGED-DVYLHTAPLCHIGGLSSAMAMLMVGAC 239
GTTG+PKGV++SH+ L+ +L ++ + E LH+AP+ H+ S +A +VG
Sbjct: 168 GTTGTPKGVMLSHANLMAAALGALSTGQFLEPRGRLLHSAPMFHLADGSGWLARNLVGGT 227
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
HV +P F + AVE++ +T + P ++ + S+K ++ G +
Sbjct: 228 HVILPSFTPDAVAVAVERYQITDMFLAPTMIQMFVDSPAAAQ--HDLSSLKHLIYGASPI 285
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMT---LYDPTLETPGQLPQAFGNVTPNS 356
+++ A P+ KL+ AYGMTE S + T +T DP L
Sbjct: 286 SQAVLERAMRLLPQVKLLQAYGMTELSPTTTVLTGEEHLDPALLR--------------- 330
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG 411
G+ P E+K+ + + V G + RG HVML YW++ G
Sbjct: 331 -------SAGRAVPIAEVKIVDEDDNEVPRGTVGEVAARGPHVMLGYWNRPEETAQALRG 383
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD G +DD G +++V R I +GGENVY EVE L QH + V+G+ +
Sbjct: 384 G-WMHTGDGGYLDDNGYLFIVDRIKDMIVTGGENVYSAEVENALAQHASVATCAVIGVPD 442
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
A E V A V L+E + +++ LR HC + +KAPR V
Sbjct: 443 ADWGERVHAVVVLQEG----------------MTATAQELRDHCGSL-IARYKAPRT-VD 484
Query: 532 WRKPFPLTSTGKIRRDEVRR 551
+ PLT+ K+ + ++R+
Sbjct: 485 FVDSLPLTAAAKVSKVDLRQ 504
>gi|441513325|ref|ZP_20995156.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
gi|441451942|dbj|GAC53117.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
Length = 551
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 159/555 (28%), Positives = 251/555 (45%), Gaps = 63/555 (11%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAF 79
+++ +R T +F +DV LA GLL +G+ GD + + A N EW+L A A
Sbjct: 42 ALIDAAADRQWTYTEFHRDVRALAAGLLRLGVAPGDRIGLWAPNR---FEWVLTQYATAE 98
Query: 80 IGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSL 135
IG I+ LN + E A+ S V+L + DS Y + A P LR V+
Sbjct: 99 IGAILVNLNPAYRQNEIEYALKQSGSSVVLAAERFKDSGYASMLAEARPHCPDLRTVVTF 158
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
S+D+ + LTA R S + + + I +TSGTTG PKG +SH
Sbjct: 159 --ESTDWAD----LTATPSDEELARVADIAASLSADDPINIQYTSGTTGFPKGATLSHRN 212
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALE 253
+ ++ Y +D P H G + +A GA V P F+ ++ L+
Sbjct: 213 IGNNGYLVGELLDYTAEDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPRATLD 272
Query: 254 AVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPSELMKEATNSF 311
AV +H TSL VP + +A+LA L + S++ + G P ++M++ +
Sbjct: 273 AVAEHRCTSLYGVPTMFIAELALLDAAPDGYAPDLSSLRTGIMAGSPCPEQVMRQVVDRM 332
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ YGMTETS T + DP + + VG+ PH
Sbjct: 333 HMSEVSICYGMTETSPVSTQTRVDDPL--------------------ELRVTTVGQVGPH 372
Query: 372 VELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + G+ + G + TRG VM YW+ + W+ TGD+ +DD
Sbjct: 373 LEIKIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDADGWMHTGDLAEMDD 432
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VRLR
Sbjct: 433 AGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLR 492
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ D ++++ ++ R K PR +V K FP+T TGK+R
Sbjct: 493 ------DHATDLTAEDVRAFADGKIARH----------KIPR-YVHVVKEFPMTVTGKVR 535
Query: 546 RDEVRREVMSHLKSL 560
+ +R E S L+ L
Sbjct: 536 KVAMREEATSILEDL 550
>gi|373856103|ref|ZP_09598848.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453940|gb|EHP27406.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 547
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 154/573 (26%), Positives = 259/573 (45%), Gaps = 84/573 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI---LAVA 78
+VV N T +QF +A+G +++GL +GD +AI A N Y EW+ A
Sbjct: 24 EAVVYPDRNLRYTYKQFDDQCRKVAKGYMKLGLDAGDKMAIWATN---YPEWLTTQFATG 80
Query: 79 FIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS--- 134
+G I+ +N + E + S M++ +E + Y++ + +P LR V
Sbjct: 81 KMGAILVTVNTSYQSAELEYLLKQSDATTMVLMEEYRGTSYVDTLYEIVPELRTSVPGQL 140
Query: 135 -------------LGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV 174
LG SD + D+++ ++LK S P+ +
Sbjct: 141 KSEKLPFLKNVIVLGEKRYPGMFLWSDLLEMADLVSDELLKAR-------MESLDPDDVI 193
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAM 233
+ +TSGTTG PKGV+++H+ L+ ++ A + D P H G + +
Sbjct: 194 NMQYTSGTTGFPKGVMLTHNNLVNNAVNVAACMNLTHKDRMCIPVPFFHCFGCVLGTLTC 253
Query: 234 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
+ VGA V + +F L AV+ T+L VP + +A L + S++ +
Sbjct: 254 VAVGATMVPVKEFNVTDVLSAVQDEKCTALHGVPTMF--IAELNHPEFEKYELSSLRTGI 311
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P+E+MK T + +++ YG TE+S +T DP ++
Sbjct: 312 MAGSTCPAEVMKAVTETMGASEITITYGQTESSPGITMTRTNDPF------------DLR 359
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 407
NSV G+ P+VE+K+ ++ G + TRG HVM Y+ A
Sbjct: 360 VNSV--------GRAMPNVEVKIVDPTTNKEVPFGVPGELCTRGYHVMKGYYKNPAATAD 411
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
E WL TGDI +D+ G + GR I GGEN+YP E+E L HP ++ + VV
Sbjct: 412 AIDEENWLHTGDIAVMDENGYCQITGRLKDMIIRGGENIYPREIEEFLYTHPKVLDVQVV 471
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
GI + + E V A +RL+E + +SE +R +C+ K ++ FK PR
Sbjct: 472 GIPDEKYGEEVTAWIRLKE----------------DTTATSEEIRDYCKGK-ISRFKIPR 514
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSL 560
++ + + FP+T++GKI++ ++R + + + L
Sbjct: 515 -YIEFCEAFPMTASGKIQKFKLREDAIKFVNVL 546
>gi|343927183|ref|ZP_08766662.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343762921|dbj|GAA13588.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 551
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 249/561 (44%), Gaps = 75/561 (13%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAF 79
+++ R T +F +DV LA GLL +G++ GD V + A N EW+L A A
Sbjct: 42 ALIDAGAGRQWTYTEFHRDVRALAAGLLRLGVKRGDRVGLWAPNR---FEWVLVQYATAE 98
Query: 80 IGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWY---LELQHTAIPSLRWHVSL 135
IG I+ LN + E A+ S V+L + DS Y L H P LR V+
Sbjct: 99 IGAILVNLNPAYRQNEVEYALRQSGTSVVLAAERFKDSGYASMLAEAHPHCPDLREVVTF 158
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
S++ LTA R S + + + I +TSGTTG PKG +SH
Sbjct: 159 ESAAWT------ELTATPTDEELARVAEIAASLSADDPINIQYTSGTTGFPKGATLSHRN 212
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL--------SSAMAMLMVGACHVFIPKFE 247
+ ++ Y DD P H G+ S AM++ G P F+
Sbjct: 213 IGNNGYLVGELLDYTADDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPG------PAFD 266
Query: 248 SKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPSELMK 305
K+ L+AV +H TSL VP + +A+LA L + S++ + G P ++M+
Sbjct: 267 PKATLDAVAEHRCTSLYGVPTMFIAELALLDAAPDGYAPDLSSLRTGIMAGSPCPEQVMR 326
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + +++ YGMTETS T + DP + + V
Sbjct: 327 QVVDRMHMSEVSICYGMTETSPVSTQTRVDDPL--------------------ELRVTTV 366
Query: 366 GKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+ PH+E+K+ + G+ + G + TRG VM YW+ + W+ TGD
Sbjct: 367 GQVGPHLEIKIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDADGWMHTGD 426
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++
Sbjct: 427 LAEMDEAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELM 486
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A VRLR + D ++++ ++ R K PR +V K FP+T
Sbjct: 487 AWVRLR------DHATDLTAEDVRAFADGKIARH----------KIPR-YVHVVKEFPMT 529
Query: 540 STGKIRRDEVRREVMSHLKSL 560
TGK+R+ +R E L+ L
Sbjct: 530 VTGKVRKVAMREEATHILEDL 550
>gi|239820433|ref|YP_002947618.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239805286|gb|ACS22352.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 500
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 258/560 (46%), Gaps = 73/560 (13%)
Query: 8 HICQCLSRIAAVKRN------SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVA 61
++ Q L R A++RN + V G R T Q + A L G+ GD VA
Sbjct: 2 YLTQGLHR--ALQRNPGMAALTHVGDAGVRRQTHAQMADGIARQAAALARRGIARGDRVA 59
Query: 62 ISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLEL 121
+ A NS+ + ILA ++G + PLN RWS E + A+ + +L+ ES
Sbjct: 60 LLAPNSDQLVRAILACWWLGAVACPLNIRWSTPELAHALQDSQASLLLVHES-------- 111
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
LR +L + + + + D L + G +L LP + + A I+ +T G
Sbjct: 112 -------LR---ALTPADAPALAQLDALEEE---GAALEPLPDSRTGGDALAAIL-YTGG 157
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG KGV++SH+ S+ + A + D V L APL H+ GL + L+VG V
Sbjct: 158 TTGRSKGVMLSHANFWTASMTRGAELNNAPDSVSLLVAPLFHVAGLGRLVGQLIVGGGCV 217
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DSVKKILNGGGGLP 300
+ +F + ++A+E+H + ++ VP++ L +L+ GR S+ +I G +P
Sbjct: 218 TMAQFRPAAVIDAIEEHRIGDIVVVPSM---LQSLLDDAAFTPGRVRSLTRIAFGAAPMP 274
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+L+ A ++P A+ AYG+TET+ ++ + E +A G +
Sbjct: 275 PDLLDRALEAWPHAEFFQAYGLTETAGAVCINLPSNHRAEA-----RALGRLN------- 322
Query: 361 QGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ E+ + + VG +L RG VM YW A + + + WL
Sbjct: 323 ---SVGRAGLGAEIIIADESGRELPRGEVGEVLARGPMVMQGYWRNPEAT-AAALRDGWL 378
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD G + G++++V R I SGGENVY EVEA L HP + V+G+ +AR
Sbjct: 379 RTGDAGRMLPDGHLFIVDRLKDMIISGGENVYCAEVEAALRSHPQVRQAAVIGVPDARWG 438
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A V L + + LR CRE+ L G+K PR R+
Sbjct: 439 EAVHAAVVLADDARADADE----------------LRAWCRER-LAGYKCPRGISFLRE- 480
Query: 536 FPLTSTGKIRRDEVRREVMS 555
PL++ GK+ ++ +R + +
Sbjct: 481 LPLSAAGKVLKNVLRERLQA 500
>gi|424858994|ref|ZP_18283008.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356661503|gb|EHI41814.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 519
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 162/554 (29%), Positives = 255/554 (46%), Gaps = 59/554 (10%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
+ ++ Q L R +S +TI G+R T + V L+ GL E+G+ GD VA+ L
Sbjct: 8 RVYLTQFLHRALQQSPDSPMTICGDRVRTTRDVADRVARLSGGLQELGVSEGDRVAVLTL 67
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA 125
NS+ E LA + G +V P+N RWS +E + ++ V+L+ D+ +
Sbjct: 68 NSDRNHEIFLACWWAGAVVNPVNIRWSGREIADSLRDAGAVVLLVDDDFLDLVPAFREQC 127
Query: 126 IPSLRW--HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV-IICFTSGT 182
LR H G ++ + +++ A S P GA+ + +T GT
Sbjct: 128 -ADLRAVVHCGSGVAAQGMTDYEELIAA---------SEPAPDKRTGGGAMGALLYTGGT 177
Query: 183 TGSPKGVVISHSALIVQSLA-KIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TG KGV++SH L+ +L + A V L +P+ HI GL + ++G V
Sbjct: 178 TGVSKGVMVSHRNLLTAALGTQAACQSVFPGGVNLVVSPMFHIAGLVAWATQNLLGGTQV 237
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
F+P F ++ LEA+++H VT++ VP ++ L V+ SVK + G +
Sbjct: 238 FLPTFSPRAVLEAIQRHRVTTVGAVPVMLQMLVAHPDVES--YDLSSVKSVRYGASPISP 295
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
L++ A F + YGMTET+ + G+ A G+ S
Sbjct: 296 TLLQRAMTVFRNSGFAQGYGMTETAH-----------ITVLGRDDHAAGSEVLRS----- 339
Query: 362 GVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ PH EL+V V G I+TRG HVML YW++ +V W+
Sbjct: 340 ---AGRALPHCELRVVDVDDREVSVGVLGEIVTRGDHVMLGYWNRPEETAAVLRNG-WMH 395
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGDIG +D G +++V R I +GGENVY EVE L HP + V+G+ + R E
Sbjct: 396 TGDIGYVDRHGYLFVVDRIKDMIITGGENVYSTEVENALAAHPAVEACSVIGVPDTRWGE 455
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V + V LRE + ++ D+ LR H R + G+K PR V +
Sbjct: 456 RVHSVVVLREG---ARTDADE-------------LRAHVRGL-IAGYKVPRT-VEFLDAL 497
Query: 537 PLTSTGKIRRDEVR 550
P+++ GK+ + ++R
Sbjct: 498 PVSAAGKVLKRDLR 511
>gi|221067818|ref|ZP_03543923.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220712841|gb|EED68209.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 518
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 254/558 (45%), Gaps = 68/558 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + ++ TI R + Q V A L +G+++GD VAI LNS
Sbjct: 2 YLTQNLRRSIQQQPHATATIYNGRRRSFVQLGDRVARFAGALRALGVQAGDRVAILGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+WYLE+ LA + G V P+N RWS E + ++ +L+ D+S E++ +A
Sbjct: 62 DWYLEYYLATYWAGAAVNPINIRWSAAEIAYSLDDCDTHVLLVDDSFLPLIPEIRKSA-Q 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGTTGSP 186
+L+ + +G + ML+ + L + P + E + +T GTTG+P
Sbjct: 121 ALQTLIHIGDGPA----PEGMLSYEALIA---NTEPVEDALRGGEDLAGVFYTGGTTGTP 173
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV++ H L +++ + V LH AP+ H+ + A+L G CHV +P+F
Sbjct: 174 KGVMLCHRNLYTNAISGVCENTARRSSVGLHAAPMFHLADGAFMNALLAAGGCHVMVPRF 233
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L+A+ VT L+ VP ++ L V + S++ +L G + L+
Sbjct: 234 DPVAVLQAISTESVTDLLLVPTMIQMLVDHPDVHQ--YDLSSLQNMLYGASPISEGLLDR 291
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A + P AYGMTE + T ++ P+ +H+ +G G
Sbjct: 292 AMKTIPSVGFTQAYGMTELAPVATVLS------------PE---------MHRQEGWAQG 330
Query: 367 KPAPHVELKVCS-------DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV-- 413
+ VC+ DG VG ++ RG VML YW+ KP+ + +
Sbjct: 331 RHRSAGRATVCTEVRIVDPDGQEVARGEVGEVVVRGPGVMLGYWN----KPAETAAAIRN 386
Query: 414 -WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD G +DD G V++V R I +GGENVY EVE+V+ HPG+ V+G+
Sbjct: 387 GWMHTGDGGRMDDEGYVFIVDRLKDMIVTGGENVYSVEVESVITTHPGVASCAVIGVP-- 444
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
S QW E + +L ++ L Q C+ + + +K PR V +
Sbjct: 445 --------------SEQWGELVHVFIVRKTGAMLEADELIQFCKNR-IAHYKCPRE-VSF 488
Query: 533 RKPFPLTSTGKIRRDEVR 550
PL+ GKI + +R
Sbjct: 489 IDAMPLSGAGKILKTTLR 506
>gi|375140128|ref|YP_005000777.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820749|gb|AEV73562.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 543
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 169/569 (29%), Positives = 249/569 (43%), Gaps = 84/569 (14%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+R+++V R T ++FV DV LA GLLE G+ GD V I A N +EW L A A
Sbjct: 34 ERDALVECWTGRRWTYREFVSDVDTLALGLLERGIGKGDRVGIWAPNCAEWALVQ-YATA 92
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIPSLR------- 130
IG I+ +N + E + + L+ E S Y + P
Sbjct: 93 KIGAILVNINPAYRAHELEYVLNQAGVMSLIAAERFKSSEYAAIIEKVRPRCEALKQVVL 152
Query: 131 -----WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
W+ LG+ R L+A H+ + + I +TSGTTG
Sbjct: 153 LGGEDWNALLGTGRR---TDRGRLSA------------IAHTLTADDPINIQYTSGTTGF 197
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-I 243
PKG +SH ++ + GY E D P H G+ +A GAC V
Sbjct: 198 PKGATLSHHNILNNGFLVGELCGYTEADRICIPVPFYHCFGMVMGNLAATSHGACMVIPA 257
Query: 244 PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
P FE+++ LEAV TSL VP + +A+LA + + D S++ + G P
Sbjct: 258 PSFEARATLEAVAAERCTSLYGVPTMFIAELA-----ESGFGDFDLASLRTGIMAGSPCP 312
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
E+MK+ + ++ YGMTETS T DP +
Sbjct: 313 VEVMKQVIDRMGITEITICYGMTETSPVATQTRADDPI--------------------ER 352
Query: 361 QGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+ VG PH+E+K+ + G + TRG VML YW++ W
Sbjct: 353 RVSSVGTVHPHLEVKIVDPETGVTVPRGAAGELCTRGYSVMLGYWERPDWTAEAIDAARW 412
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+ +DD G V ++GR + GGEN+YP E+E L HP I+ V+G+ + R
Sbjct: 413 MHTGDLAVMDDEGYVSIIGRSKDMVIRGGENIYPREIEEFLYTHPHILDAQVIGVPDPRY 472
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E ++A VR++E + LS+E LR C K L +K PR +V
Sbjct: 473 GEELMAWVRMKEGTE---------------PLSTEALRAFCTGK-LAHYKIPR-YVHVVD 515
Query: 535 PFPLTSTGKIRRDEVRREVMSHLKSLPSN 563
FP+T TGK+R+ E+R ++ LK LP +
Sbjct: 516 EFPMTVTGKVRKVEMRDAAITLLK-LPQD 543
>gi|301064315|ref|ZP_07204749.1| AMP-binding enzyme [delta proteobacterium NaphS2]
gi|300441594|gb|EFK05925.1| AMP-binding enzyme [delta proteobacterium NaphS2]
Length = 519
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 153/554 (27%), Positives = 261/554 (47%), Gaps = 52/554 (9%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + L + A + + + G + + V LARGLL++G+ GD +A+ NS
Sbjct: 3 LNELLPKAARLYPDKEAVVCGELRMSYRDVAARVWRLARGLLDLGIEKGDRIAVLHENSH 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH--TAI 126
YLE A A +G I+ LNYR + +E + + +L+ + ++Y + + ++
Sbjct: 63 EYLEAYFAAAHLGIILVSLNYRLAPRELAVILNDSESQLLM---AEGTFYEKAKGLPESV 119
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
P+L+ + + + V +D+ +L+ S + P + + + + + +TSGTTG P
Sbjct: 120 PTLK-RIIWTRAHAHMVTGKDLEYEALLETRSDQPPP-SPAISDDDVAHLYYTSGTTGRP 177
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF 246
KGV+++H + +L IA + + D + H APL H+ + A+ VG HV IP F
Sbjct: 178 KGVMLTHKNVKSHALGTIAELHLTDHDRWFHVAPLFHLADAWATFAITWVGGKHVLIPAF 237
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
++ +++ +T +P ++ + V+K S++ +L+GG + E +++
Sbjct: 238 DAGKVCRMIQEEKITLSNLIPTMLNMMVNHPDVQKF--DYASLRVVLSGGASIAPETVRK 295
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYD--PTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+F + I YGMTETS LT L D TL Q F T
Sbjct: 296 IMEAF-QCDYIQTYGMTETSPYLTLSILKDHLKTLTEEEQF--KFKAKT----------- 341
Query: 365 VGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
G+ V L+V + VG I+ +G V YW + + + + WL T
Sbjct: 342 -GREFIGVSLRVVDEQGNDVALDDKQVGEIIVKGDTVTPGYW-RLPEETERAIKDGWLHT 399
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ +D V +V R+ I +GGENVY EVE VL HP ++ V+G+ +A E
Sbjct: 400 GDLAVMDAERYVNIVDRKKDMIITGGENVYSSEVENVLYTHPDVLEAAVIGVPDAHWGEA 459
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V ACV L+E+ +S +E++ +CR K L G+K P+ V + K P
Sbjct: 460 VKACVVLKEA---------RSVTGEEII-------AYCR-KELAGYKTPK-SVDFLKALP 501
Query: 538 LTSTGKIRRDEVRR 551
T +GKI + +R
Sbjct: 502 KTGSGKIYKKGLRE 515
>gi|39934486|ref|NP_946762.1| fatty-acid--CoA ligase [Rhodopseudomonas palustris CGA009]
gi|39648335|emb|CAE26855.1| putative fatty-acid--CoA ligase [Rhodopseudomonas palustris CGA009]
Length = 519
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 154/559 (27%), Positives = 236/559 (42%), Gaps = 79/559 (14%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L + A+ + + V +T R + + + V LA +G+ G+ VAI A N Y+E
Sbjct: 7 LRKAASFRADDVALVTSERSFSHGEMLDRVARLASVFRRLGVTGGERVAILAANGHEYIE 66
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT-------- 124
AV + GG+V P+N R+S E +T P++LV+D S L+L
Sbjct: 67 CYFAVLWAGGVVVPINSRFSLAEMIEQVTDAEPIVLVSDRSFLDSALQLADACRGITAVV 126
Query: 125 -------AIPSL-RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 176
+P L + +L AD +G + +
Sbjct: 127 AAAPGAAGLPKLYDYEAALADEKP---------CADAGRGN-------------DDLACL 164
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV 236
+T GTTG KGV++SH L V ++ G+ E V LH PL H+G + ++
Sbjct: 165 FYTGGTTGRAKGVMLSHRNLWVNAVVTSLSFGFDETTVALHAGPLFHLGAGARVYTTSIM 224
Query: 237 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
G HV IP+F K L A+ H VT VP ++ + L + S+K I G
Sbjct: 225 GGRHVVIPRFAPKDVLAAISHHKVTVATFVPTMLGMILQLPDLDS--YDLSSLKLITYGA 282
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
+P +++E FP + +YGMTE S T ++ D LP A P
Sbjct: 283 SPMPEAVLQECLRRFPSIRFGQSYGMTELSPVATILSPDD-------HLPSA-----PR- 329
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTG 411
H+ + G+P E+++ VG ++ RG VM+ YW Q V G
Sbjct: 330 -HRLR--SAGRPVVSAEVRIVDAEDRQLKPGEVGEVVVRGPMVMMGYWKQPELTAHVLRG 386
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD G D G +++ R I +GGENVY EVE + HP ++ V+G+ +
Sbjct: 387 G-WMHTGDSGRFDTEGYLYISDRIKDMIITGGENVYSIEVENAIAAHPDVLQCAVIGVPH 445
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
A+ E V A V R L+++ L CR + +K+PR
Sbjct: 446 AKWGEAVHAVVVRRPGSS----------------LTTDELITFCRSV-IADYKSPRSIEF 488
Query: 532 WRKPFPLTSTGKIRRDEVR 550
P PL+S KI + +R
Sbjct: 489 RDDPLPLSSVNKINKAALR 507
>gi|407696853|ref|YP_006821641.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407254191|gb|AFT71298.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 517
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 254/560 (45%), Gaps = 85/560 (15%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
QC R A V G RH+ + +V V +A L +G+ GD V I AL S+ Y
Sbjct: 13 QCPERTATV-------CDGRRHSYAE-WVPRVARMAGALQGLGVAPGDRVGILALGSDRY 64
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLR 130
LE I + G ++ P+N RWS +E + ++ +L+ D + ++ + +P L
Sbjct: 65 LESIYGCWWRGAVINPVNIRWSPREIAYSLDDCGTRVLLVDRN----FIHM----VPRLG 116
Query: 131 WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW---APE---------GAVIICF 178
L + + + D AD L GY SW APE I +
Sbjct: 117 ---ELSEALEEVIYLDDDAPAD-LTGYE--------SWIADAPELDDQIASHQQLAAILY 164
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGA 238
T GTTG+PKGV++SH L +L ++A V V L+++PL H+ G++S + + +
Sbjct: 165 TGGTTGAPKGVMLSHRNLYSGTLGQMAAVQRSRHPVALYSSPLFHVAGMASVVQIAVRQG 224
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
HV +P F+ L+ +E+ V VP ++ L L + ++K + G
Sbjct: 225 THVILPGFDPAVVLDTIEREGVEETFLVPTMLRML--LDHPDFSRHDLSALKYLRYGASP 282
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE--TPGQLPQAFGNVTPNS 356
+ L+ A P A+ +YGMTE S ++ ++ + T E G+L A
Sbjct: 283 MDEALLLRAMEVLPGAEFSQSYGMTELSPVISILSGWHHTAEGRRAGKLKSA-------- 334
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
G P P+ E+++ + + VG I+ RG VM YW++ A+ + +
Sbjct: 335 ---------GYPLPNAEVRIVDENDNDVPPGQVGEIIARGPMVMEGYWNK-PAQTAEALR 384
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD G +D+ G +++V R I +GGENVY EVE LL+ P + V+G+ +
Sbjct: 385 NGWMHTGDGGYMDEDGFIYVVDRIKDMIVTGGENVYSAEVENALLKLPEVAQCAVIGVPD 444
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
R E V A V Q E D HCR+ + G+K P+ +
Sbjct: 445 ERWGERVHAVVVTAPGQQLDEQRID----------------AHCRDL-IAGYKCPK-SIE 486
Query: 532 WRKPFPLTSTGKIRRDEVRR 551
+R P++ GKI + E+R+
Sbjct: 487 FRDALPMSGAGKILKYELRK 506
>gi|333990040|ref|YP_004522654.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333486008|gb|AEF35400.1| fatty-acid-CoA ligase FadD35 [Mycobacterium sp. JDM601]
Length = 511
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 252/556 (45%), Gaps = 71/556 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R++++ + R + +DV LA GLL+ G+ +GD V I A N EW+L A
Sbjct: 6 DRDALIDLPARRRWNYAELWRDVRRLATGLLQAGISAGDRVGIWAPNCA---EWVLTQYA 62
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYLELQHT---AIPSLRWH 132
A IG ++ +N + E + A+ M+++ S Y+ L A P LR
Sbjct: 63 TAEIGAVLVTINPAYRSHELAYALNQSGLAMVISASRFKTSDYVALLREVAPACPGLREA 122
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA---VIICFTSGTTGSPKGV 189
V + D R+ L G + ++ H+ P A + I +TSGTTG PKGV
Sbjct: 123 VFI-----DSARWRE------LAGTPVDTVALAHAARPLRATDPINIQYTSGTTGYPKGV 171
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFE 247
+SH ++ ++GY D PL H GL +A GA + P F+
Sbjct: 172 TLSHRNILNNGYLVGDLLGYTHRDRICLPVPLYHCFGLVMGNLAATSHGAAIILPGPGFD 231
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+ L AV++ TSL VP + +A L S++ + G P+++M+
Sbjct: 232 PAATLRAVQEEACTSLYGVPTMF--IAELGLPDFADYDLTSLRTGIMAGSPCPAQVMRRV 289
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+ ++ YGMTETS P + + +S+ Q + VG+
Sbjct: 290 IDDMHMTEIAICYGMTETS-------------------PVSTQTRSGDSLTQ-RVETVGR 329
Query: 368 PAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PH+E+K+ + H VG + TRG VM YW+ + E W+ +GD+
Sbjct: 330 VGPHLEIKMIDPATGHPVPRGQVGELCTRGYSVMTGYWNDPAKSEAAIDAEGWMHSGDLA 389
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + E ++A
Sbjct: 390 VMDDDGYVRITGRIKDMVIRGGENIYPREIEEFLHTHPDILDAQVIGVPDEIYGEELMAV 449
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V LR+ L+ E LR+ C + L FK PR + + FP+T+T
Sbjct: 450 VMLRDGAG---------------PLTVERLREFCAGR-LAHFKVPRYLRVVAE-FPMTAT 492
Query: 542 GKIRRDEVRREVMSHL 557
GK+R+DEVRR+V+ L
Sbjct: 493 GKVRKDEVRRQVIEQL 508
>gi|333913671|ref|YP_004487403.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
gi|333743871|gb|AEF89048.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
Length = 520
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 249/551 (45%), Gaps = 54/551 (9%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q + + + + I G + Q Q + A L + + GD V + LNS
Sbjct: 4 YLTQAIHKGRRERAGATAAICGAEQASWSQLAQRIERCAGLLRALDVAPGDRVGMMGLNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
YLE+ + G V P+N RWS E + ++ +L D++ L+ +
Sbjct: 64 IRYLEYFYGCWWAGAAVNPVNIRWSAHEVAYSLDDCDTRVLFVDDAFAPLVPRLRELS-S 122
Query: 128 SLRWHVSLGSSSS--DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
SLR V G+ ++ ++ +L A +LRS + +T GTTG
Sbjct: 123 SLRTVVFCGTGAAPEGALHYEQLLAAATPCADALRS--------GNDLAAVMYTGGTTGR 174
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV++SH L + +L+ + V V + P+ H+ G A+ M V +P
Sbjct: 175 PKGVMLSHDNLFINALSNASNVPRQHVKVGMVVTPMFHVAGCGLALLMAQRLVPQVIVPA 234
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + L V+QH V L VP ++ L R+ + S++ +L G + + L++
Sbjct: 235 FDELAILAGVQQHGVNELFLVPTMIRRLIEHPRLAEF--DLSSLRLMLYGAAPIDASLLE 292
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A + P A AYGMTE S ++ M P PG PQ +
Sbjct: 293 RAMQALPGADFAQAYGMTELSPTIVSM---GPAEHRPG--PQ----------RERLLRAA 337
Query: 366 GKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+P E+++ DG VG I RG VM YW++ A+ + + + W+ TGD
Sbjct: 338 GRPVTIAEVRIV-DGEGRELPPGEVGEITARGPMVMQGYWNK-PAETAAALKDGWMHTGD 395
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+G +D G +++V R I SGGENVY EVE + Q P + V+G+ + R E V
Sbjct: 396 MGRLDADGYLFVVDRLKDMIVSGGENVYSAEVENAIAQLPQVAMCAVIGVPDERWGERVH 455
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + RE +E +EV+ HCRE+ + G+K PR V +R PL+
Sbjct: 456 AVIVAREGQPLTE---------------AEVI-AHCRER-IAGYKCPR-SVEFRAELPLS 497
Query: 540 STGKIRRDEVR 550
+ GK+++ ++R
Sbjct: 498 AAGKLQKFQLR 508
>gi|411007068|ref|ZP_11383397.1| AMP-binding domain protein [Streptomyces globisporus C-1027]
Length = 535
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 246/562 (43%), Gaps = 71/562 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R AA R ++V + R T +FV DV LAR L+ G+ GD V I A+N
Sbjct: 20 IGRNLDRTAAAHGDREALVDVATGRRWTYTEFVADVDELARALMASGVAKGDRVGIWAVN 79
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYL- 119
EW+L A A IG ++ +N + E + +LV + +SD L
Sbjct: 80 CP---EWVLVQYATARIGAVMVTVNPAYRAHEVEFVLKQAGISLLVASLSHRTSDYRALV 136
Query: 120 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
E P LR +G S ++ +T D L + + + I +
Sbjct: 137 EEVRVNCPGLRAVHYIGDPSWAELTAAAPAVTRDQLAAREA-------ELSCDDPINIQY 189
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 237
TSGTTG PKG +SH ++ + Y E D P H G+ +A G
Sbjct: 190 TSGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLACTSHG 249
Query: 238 ACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
AC V P FE + L AV+Q TSL VP + +A L S++ + G
Sbjct: 250 ACIVIPGPSFEPATVLAAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGIMAG 307
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 308 SPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER--------------- 351
Query: 357 VHQPQGVCVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAKPSV 408
+ VG+ PH+E+KV GSS G + TRG VML YWDQ V
Sbjct: 352 ----RTGTVGRVLPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRTAEV 405
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I + VVG
Sbjct: 406 IDAGRWMHTGDLAVMGEDGYVQVVGRIKDMIIRGGENVYPREIEEFLHGHPKIADVQVVG 465
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + R E ++ACV R+ + E L +HCRE+ L +K PR
Sbjct: 466 VPDERYGEEILACVIPRDPADPP---------------TLEELTEHCRER-LAHYKIPRR 509
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
+ + FP+T +GK+R+ E+R
Sbjct: 510 LRIL-ETFPMTVSGKVRKIELR 530
>gi|440700609|ref|ZP_20882849.1| putative long-chain-fatty-acid--CoA ligase [Streptomyces
turgidiscabies Car8]
gi|440276798|gb|ELP65015.1| putative long-chain-fatty-acid--CoA ligase [Streptomyces
turgidiscabies Car8]
Length = 510
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 154/543 (28%), Positives = 251/543 (46%), Gaps = 69/543 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+VV R T ++ V LA GL E+G+R GD+V + N +LE + A +G
Sbjct: 17 EAVVVTQDERRLTVRELHDRVNRLAAGLTELGVRRGDVVGLLLYNRPEFLELVYAANRVG 76
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTD----ESSDSWYLEL---QHTAIPSLRWHVS 134
+ PLNYR S +E + + ++VT+ ++D +L +H + V
Sbjct: 77 AVFLPLNYRLSEEEWAYILGHSEAKVIVTEPEFVRAADRIAGKLSGLEHRVL------VD 130
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
S+++ +L D +G + P+ + +TSGTT PKGV I++
Sbjct: 131 GEPESAEWTGYEALL--DRHEGTRVEPA----EVGPDDLQRLMYTSGTTSRPKGVRITYG 184
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALE 253
L +++++I G D L PL H+GGL A+ +L G V KF++ L
Sbjct: 185 NLHAKNVSQIVHFGLTAADTTLVAGPLYHVGGLDMPALPVLYAGGGVVLQRKFDAPGVLR 244
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
A+E+H VT+ P +M + + ++++ S++ I+ GG P +++ N+FP
Sbjct: 245 AIEEHRVTNAWLAP-VMVNAVLEVPDRESYD-TTSMRFIVGGGEKTPEPVLRRIMNAFPN 302
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
A AYG+TET S TF+ + L G VG+P PH
Sbjct: 303 AWFADAYGLTETVSGDTFLD-REHGLSKLG--------------------SVGRPVPHTR 341
Query: 374 LKVCSDG-----SSHVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+++ D + +G I RG V YW D+ ++ G W TGDIG +D+ G
Sbjct: 342 IRIVDDTGEEAPAGELGEITLRGPKVFAGYWRDEKATAAALRDG--WFHTGDIGHVDEEG 399
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+++ R+ I SGGEN+ EVE VL +HP ++ VVG+A+ R E+ A V R
Sbjct: 400 FLYIDDRKKDMIVSGGENIATPEVERVLYEHPAVLEAAVVGLAHPRWGEVPRAFVVFRPG 459
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+++ D+ LR C+E+ L FK P F + + P T +GK+ +
Sbjct: 460 ---TDAGTDE-------------LRGFCQER-LAKFKVPARFDIVDE-LPRTPSGKVLKR 501
Query: 548 EVR 550
+R
Sbjct: 502 TLR 504
>gi|352100941|ref|ZP_08958452.1| AMP-binding domain protein [Halomonas sp. HAL1]
gi|350600862|gb|EHA16919.1| AMP-binding domain protein [Halomonas sp. HAL1]
Length = 573
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 251/564 (44%), Gaps = 80/564 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
++++ + N H + +Q ++V AR LL IG+ GD VAI A N SEW L A A
Sbjct: 39 NDALIVLHQNIHWSYRQLQEEVNRCARALLSIGVNKGDRVAIWAPNCSEWTLTQ-FATAK 97
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL--------------ELQ 122
IG I+ +N + E A+ LVT +SSD + EL+
Sbjct: 98 IGAILVNINPSYRTHELEYALNQSGARFLVTANSFKSSDYSAMLYELAPELNTCIEGELK 157
Query: 123 HTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+P L ++L S SD +N+ ++ + +L F + A+
Sbjct: 158 SQKLPDLECIINLSSEKLSGMWRWSDLMNEASKVSQTDVDDLQ-ATLQF------DDAIN 210
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
I +TSGTTG PKG +SH ++ +G+ +D + PL H G+ M
Sbjct: 211 IQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMGNLGCM 270
Query: 236 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
+ P F+ L+AV + T+L VP + +A L S++ +
Sbjct: 271 THGATMIYPDEGFDPGKVLKAVHEQKATALYGVPTMF--IAELDHPDFPGTDLSSLRTGI 328
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P+E+MK+ + + AYGMTETS T
Sbjct: 329 MAGSICPAEIMKQVISKMNMKGVQIAYGMTETSPVST--------------------QTG 368
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 407
N + + VG+ PH+E K+ G+ +G + TRG VML+YW+ A
Sbjct: 369 ANDSIEKRVSTVGRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATAE 428
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V
Sbjct: 429 AIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVT 488
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E ++A V+L + SE ++ E LR++C+ K +T FK PR
Sbjct: 489 GVPDKKYGEELIAWVKLNST--ASE-------------VTGEELREYCKGK-ITHFKIPR 532
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRR 551
F + FP+T TGKI++ ++R
Sbjct: 533 YFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|359786297|ref|ZP_09289433.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
gi|359296411|gb|EHK60663.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
Length = 567
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 250/564 (44%), Gaps = 80/564 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
++++ + N H + +Q ++V AR LL IG++ GD VAI A N SEW L A A
Sbjct: 39 NDALIALHQNIHWSYRQLQEEVNRCARALLAIGVKKGDRVAIWAPNCSEWTLTQ-FATAK 97
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL--------------ELQ 122
+G I+ +N + E A+ LVT +SSD + +LQ
Sbjct: 98 LGAILVNINPSYRTHELEYALNQSGARFLVTAHSFKSSDYTAMLYELAPELNSSAEGQLQ 157
Query: 123 HTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+P L ++L S +DF+N+ A + + L T + + +
Sbjct: 158 SKTLPELECVINLSSEKHSGMWRWADFINE-----ASKVSQTDVNDLQATLQF--DDPIN 210
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
I +TSGTTG PKG +SH ++ +G+ +D + PL H G+ M
Sbjct: 211 IQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMGNLGCM 270
Query: 236 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
+ P F+ L+AV + T+L VP + +A L S++ +
Sbjct: 271 THGAAMIYPDEGFDPGKVLKAVHEQKATALYGVPTMF--IAELEHPDFASTDFSSLRTGI 328
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P+E+MK+ + + AYGMTETS T
Sbjct: 329 MAGSICPAEIMKQVIDKMNMKGVQIAYGMTETSPVST--------------------QTG 368
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 407
N + VG+ PH+E K+ G+ +G + TRG VML+YW A
Sbjct: 369 ANDSIDKRVSTVGRTQPHLESKIVDPGNGGILPRGEIGELCTRGYSVMLKYWKNEKATAE 428
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V
Sbjct: 429 AIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVT 488
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E ++A V+L + S+ D ++ E LR +C+ K +T FK PR
Sbjct: 489 GVPDKKYGEELIAWVKL------NSSSGD---------VTGEELRNYCKGK-ITHFKIPR 532
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRR 551
F + FP+T TGKI++ ++R
Sbjct: 533 YFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|68536632|ref|YP_251337.1| AMP-binding protein [Corynebacterium jeikeium K411]
gi|68264231|emb|CAI37719.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 564
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 251/571 (43%), Gaps = 72/571 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I QCL+RI A ++V+ G+ H T +F + V LA GL G R GD + I A N
Sbjct: 39 IGQCLARIVAEYPDHDAVIDFYGDVHLTYTEFYRKVQRLASGLHAAGYRKGDRIGIWAPN 98
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQ 122
W EW L A A IG I+ +N + KE A+ S + DS Y +
Sbjct: 99 -RW--EWTLVQFATAEIGAILVCINPSYRHKELVYAMGQSGVKGLFSAGRFKDSNYRAMI 155
Query: 123 HTAIPSLRWH-----VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
A H + GS D + +L + P P+ + I
Sbjct: 156 DAAESQFSRHNYKETIFFGSERWDELANHAILDLN----------PVREQLHPDDPINIQ 205
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 236
+TSGTTG KG ++H ++ + Y + D + P H G + + +
Sbjct: 206 YTSGTTGMAKGATLTHRNILNNGYLVGETLQYTDQDKVVIPVPFFHCFGMVMGNLGAITH 265
Query: 237 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 292
GA + P F +S LEAVE TSL VP + MA+L + K K D S++
Sbjct: 266 GATTIIAGPVFNPQSVLEAVEHGKATSLFGVPTMFMAELDEIEHAKAKGKTYDLSSLRTG 325
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P+ M++ + ++ AYGMTETS + TL D +E + G
Sbjct: 326 IMSGTACPTRTMRQVMDIMNINEITIAYGMTETSP-VNHQTLVDDPIE------KRVG-- 376
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 406
VG+P PH+E+K+ + G IL RG VM YWD
Sbjct: 377 -----------TVGRPNPHIEVKIVDPETGETVKRGEQGEILIRGFLVMQGYWDMPGKTA 425
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ W+ +GD+G++D+ G + GR + GGEN+YP E+E L+ HP I + V
Sbjct: 426 DAIDEDGWMHSGDLGTMDEEGYARITGRAKDMVIRGGENLYPREIEEFLMTHPDISDVQV 485
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
VG+ + + E ++A + +RE + DQ++ +R C + LT K P
Sbjct: 486 VGVPDEKYGEELMAFIIMREDTE----PLDQAA-----------VRDFC-DGELTRHKIP 529
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ +V + FP+T +GK+R+ E+R + L
Sbjct: 530 K-YVECVESFPMTLSGKVRKVELREHAVELL 559
>gi|333920952|ref|YP_004494533.1| feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483173|gb|AEF41733.1| Feruloyl-CoA synthetase [Amycolicicoccus subflavus DQS3-9A1]
Length = 513
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 247/556 (44%), Gaps = 65/556 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R V+TI +R T + Q + LA L +G+ + VAI +LNS
Sbjct: 2 YLTQGLHRAVQQHPERVMTIYRDRRRTYAEAAQRIAALAGALRGLGVGDDEPVAILSLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y E++LAV + ++ P+N RWS E + ++T +L DE+ ++ +
Sbjct: 62 DRYSEFLLAVPWANAVINPVNIRWSPAEIAYSLTDSDSRVLFVDEAFAPMVAAIREQS-E 120
Query: 128 SLRWHVSLGSS--SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI-ICFTSGTTG 184
LR V G ++ +++ A S P + AV + +T GTTG
Sbjct: 121 CLRTVVYCGEGLVPESMLDYEELVAA---------SDPIPDARRGGHAVAGVFYTGGTTG 171
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV++SH+ L L +A + +D LH P+ H+ + +G HV +P
Sbjct: 172 FPKGVLLSHANLQTSILGGLATGLFDKDSRILHATPMFHLADHFLWACGVSLGGTHVIVP 231
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F+ + L A+++H VT + +P ++ LA S++ + GG + ++
Sbjct: 232 AFDPPAVLAAIQEHRVTETVLIPIMIQLLAD--HPAAAEHDLSSMRHLFYGGAPISRAVL 289
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
A +FP A+ + AYGMTE ++ T +T D T G
Sbjct: 290 DRAVAAFPHARFVQAYGMTEVAAIATMLTPGDHTDTLLG--------------------T 329
Query: 365 VGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTG---EVWLD 416
G+ PH E+++ VG I+ G HVML Y L KP + + W+
Sbjct: 330 AGRALPHSEVRIVDAEDLEVPRGTVGEIVVCGGHVMLGY----LNKPEETAAVLRDGWMH 385
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD G +DD G V +V R I +GGENVY EVE + HP + V+GI + E
Sbjct: 386 TGDGGFMDDAGYVHVVDRLKDMIITGGENVYSAEVENAISAHPAVALCAVIGIPDPTWGE 445
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A + R ++ E +R+H + + G+K PR + +
Sbjct: 446 RVHAVIVCRAGRT----------------VTFEEIREHTKAL-IAGYKVPRSIEI-TESL 487
Query: 537 PLTSTGKIRRDEVRRE 552
PL+ GKI + +R++
Sbjct: 488 PLSGAGKILKRALRKQ 503
>gi|327399671|ref|YP_004340540.1| long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
gi|327182300|gb|AEA34481.1| Long-chain-fatty-acid--CoA ligase [Hippea maritima DSM 10411]
Length = 564
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 264/564 (46%), Gaps = 83/564 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+ +V++ N T ++F Q+V LA+GLL +G++ GD VAI + N+ +EW+L A A
Sbjct: 33 DCIVSLHQNIRMTYKEFKQEVDRLAKGLLALGIKKGDKVAIWSTNN---VEWVLTQFATA 89
Query: 79 FIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTD-ESSDSWYL--------------EL 121
IG ++ +N YR + E + + + ++L+ ++SD ++ ++
Sbjct: 90 KIGAVLVTINPAYRTNELEYALKQSEVNTLILIESFKTSDYIHMFYEVAPFARGAIPGQI 149
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNK-RDMLT-ADILKGYSLR----SLPFTHSWAPEGAVI 175
+P LR V + + + K +D+L+ A + LR SL F + A+
Sbjct: 150 HSNKLPHLRNVVCISDTKHTGMFKWKDVLSMASRVDDSELRDRQKSLDF------DDAIN 203
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
I +TSGTTG PK +SH +I + + + D P H G+ +
Sbjct: 204 IQYTSGTTGFPKAATLSHFNIINNGFFVGQAMKFTDKDRLCVPVPFYHCFGMVMSNLTCT 263
Query: 236 VGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
+ +P F +++ LEAVE+ T+L VP + +A L + S++ +
Sbjct: 264 THGATIVLPSEYFNAEATLEAVEKEKCTALHGVPTMF--IAELEHPRFKEFDLTSLRTGI 321
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+MK ++ AYG TE S +T TL D TLE
Sbjct: 322 MAGSPCPVEVMKRVNKEMHMEQVEIAYGQTEASPVIT-QTLADDTLE------------- 367
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 407
H+ + VG+P P++E+K+ + + + G + RG +VM Y++ A
Sbjct: 368 ----HRTE--TVGRPLPYIEVKIVNPETGEILPVGEQGELCARGYNVMKYYYNNPQATKE 421
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
+ WL TGD+ ++D+ G + GR I GG+N+YP E+E L HP + + V+
Sbjct: 422 AIDEDGWLHTGDLATMDEDGYFKITGRIKDMIIRGGQNIYPREIEEFLYTHPKVADVQVI 481
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E V A VRL+E +E E ++++C+ K + +K PR
Sbjct: 482 GVPDKKYGEEVCAWVRLKEGETATE----------------EEIKEYCQGK-IAHYKIPR 524
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRR 551
++ + FP+T TGKIR+ E+R
Sbjct: 525 -YIKFTDSFPMTVTGKIRKVEMRE 547
>gi|448746178|ref|ZP_21727846.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445566040|gb|ELY22147.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 567
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 249/568 (43%), Gaps = 86/568 (15%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+ ++++ + N H + +Q ++V AR LL IG+ GD VAI A N SEW L A A
Sbjct: 38 ENDALIVLHQNIHWSYRQLQEEVNRCARALLSIGVNKGDRVAIWAPNCSEWTLTQ-FATA 96
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL--------------EL 121
IG I+ +N + E A+ LVT +SSD + EL
Sbjct: 97 KIGAILVNINPSYRTHELEYALNQSGARFLVTANNFKSSDYSAMLYELAPELKASNDGEL 156
Query: 122 QHTAIPSLRWHVSLGSSS-------SDFV---NKRDMLTADILKGYSLRSLPFTHSWAPE 171
+ +P L ++L S SD + NK D L+ +L F +
Sbjct: 157 KSQKLPDLECIINLSSEKLSGMWRWSDLMKEANKVSQTDVDDLQA----TLQF------D 206
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 231
A+ I +TSGTTG PKG +SH ++ +G+ +D + PL H G+
Sbjct: 207 DAINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMGN 266
Query: 232 AMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 289
M + P F+ L+AV T+L VP + +A L ++
Sbjct: 267 LGCMTHGATMIYPDEGFDPGKVLKAVHDQKATALYGVPTMF--IAELEHEGFASTDFSTL 324
Query: 290 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 349
+ + G P+E+MK+ N + AYGMTETS T
Sbjct: 325 RTGIMAGSICPAEIMKQVINKMNMKGVQIAYGMTETSPVST------------------- 365
Query: 350 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFL 403
N + + VG+ PH+E K+ G+ +G + TRG VML+YW+
Sbjct: 366 -QTGANDSIEKRVSTVGRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDK 424
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
A W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I
Sbjct: 425 ATAEAIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISE 484
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
+ V G+ + + E ++A V+L + ++ E LR++C+ K +T F
Sbjct: 485 VQVTGVPDKKYGEELIAWVKLNSTAG---------------DVTGEELREYCKGK-ITHF 528
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K PR F + FP+T TGKI++ ++R
Sbjct: 529 KIPRYFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|260577833|ref|ZP_05845767.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
gi|258604060|gb|EEW17303.1| long-chain-fatty-acid--CoA ligase [Corynebacterium jeikeium ATCC
43734]
Length = 564
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 164/571 (28%), Positives = 251/571 (43%), Gaps = 72/571 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I QCL+RI A ++V+ G+ H T +F + V LA GL G R GD + I A N
Sbjct: 39 IGQCLARIVAEYPDHDAVIDFYGDVHLTYTEFYRKVQRLASGLHAAGYRKGDRIGIWAPN 98
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQ 122
W EW L A A IG I+ +N + KE A+ S + DS Y +
Sbjct: 99 -RW--EWTLVQFATAEIGAILVCINPSYRHKELVYAMGQSGVKGLFSAGRFKDSNYRAMI 155
Query: 123 HTAIPSLRWH-----VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
A H + GS D + +L + P P+ + I
Sbjct: 156 DAAESQFSRHNYKETIFFGSERWDELANHAILDLN----------PVREQLHPDDPINIQ 205
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 236
+TSGTTG KG ++H ++ + Y + D + P H G + + +
Sbjct: 206 YTSGTTGMAKGATLTHRNILNNGYLVGETLQYTDQDKVVIPVPFFHCFGMVMGNLGAITH 265
Query: 237 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKI 292
GA + P F +S LEAVE TSL VP + MA+L + K K D S++
Sbjct: 266 GATTIIAGPVFNPQSVLEAVEHGKATSLYGVPTMFMAELDEIEHAKAKGKTYDLSSLRTG 325
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P+ M++ + ++ AYGMTETS + TL D +E + G
Sbjct: 326 IMSGTACPTRTMRQVMDIMNINEITIAYGMTETSP-VNHQTLVDDPIE------KRVG-- 376
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 406
VG+P PH+E+K+ + G IL RG VM YWD
Sbjct: 377 -----------TVGRPNPHIEVKIVDPETGETVKRGEQGEILIRGFLVMQGYWDMPGKTA 425
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ W+ +GD+G++D+ G + GR + GGEN+YP E+E L+ HP I + V
Sbjct: 426 DAIDEDGWMHSGDLGTMDEEGYARITGRAKDMVIRGGENLYPREIEEFLMTHPDISDVQV 485
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
VG+ + + E ++A + +RE + DQ++ +R+ C +LT K P
Sbjct: 486 VGVPDEKYGEELMAFIIMREDAE----PLDQAA-----------VREFC-AGDLTRHKIP 529
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ +V FP+T +GK+R+ E+R + L
Sbjct: 530 K-YVECVDSFPMTLSGKVRKVELREHAVELL 559
>gi|429197284|ref|ZP_19189190.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
gi|428667012|gb|EKX66129.1| AMP-binding domain protein [Streptomyces ipomoeae 91-03]
Length = 555
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 246/555 (44%), Gaps = 65/555 (11%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R AA+ R ++V + R T +FV DV LA LL G+ GD V I A+N
Sbjct: 45 LDRTAAIWPDREALVDVPSGRRWTYARFVADVDELACALLASGVAKGDRVGIWAINCP-- 102
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVML---VTDESSD-SWYLELQH 123
EW+L A A IG I+ +N + E + +L ++ ++SD +E
Sbjct: 103 -EWVLVQYATARIGAIMVNINPAYRTHEVEYVLKQAGISLLFASLSHKTSDYRAMVEQVR 161
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P LR V +G+ D + R T D+ +R+ + + + I +TSGTT
Sbjct: 162 GNCPELRETVFIGAPGWDALIARG--TPDLADDLRVRA----GELSCDDPINIQYTSGTT 215
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ ++ YGE D P H G+ +A GAC V
Sbjct: 216 GFPKGATLSHHNILNNGYFVGEMIAYGEQDRICIPVPYYHCFGMVMGNLAATSHGACMVI 275
Query: 243 -IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
P F+ + L AVEQ TSL VP + +A L S++ + G P
Sbjct: 276 PAPSFDPAATLRAVEQERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPV 333
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK +++ YGMTETS ++ T D LE H+
Sbjct: 334 EVMKRVVAEMHMSEVSICYGMTETSP-VSTQTRRDDDLE-----------------HRTG 375
Query: 362 GVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ PHVE+KV + G + TRG VML YW++ W+
Sbjct: 376 --TVGRVLPHVEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEEPEKTAEAVDAGRWM 433
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+ + R
Sbjct: 434 HTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGVPHERYG 493
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V+ACV R++ L+ E LR C + L +K P +
Sbjct: 494 EEVLACVIPRDAAD---------------PLTLEELRAFC-DGRLAHYKIPSALRIL-DA 536
Query: 536 FPLTSTGKIRRDEVR 550
FP+T +GK+R+ E+R
Sbjct: 537 FPMTVSGKVRKIELR 551
>gi|153839677|ref|ZP_01992344.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
gi|149746805|gb|EDM57793.1| acyl-CoA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 513
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 257/569 (45%), Gaps = 84/569 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K N I G++ T +F +A +++ G++ GD VA+S N
Sbjct: 3 NLAAALQRNAASKPNKTALICGDKKFTYAEFDAIAGKIATSMIKAGVKPGDRVALSCPNL 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT--- 124
++ AV G + PLN +E + ++S +Y + T
Sbjct: 63 PFFPFVYFAVQKAGAVTVPLNVLLKSREIKYHL----------EDSKAKFYFCFEGTPEL 112
Query: 125 --AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP---------EGA 173
A ++ + + + V +D + +L S F P +
Sbjct: 113 PMAKEGMKAFKEVDACETMIVMTQDQTQKEYQGLPTLTS--FIEDIEPLADYVARDADDT 170
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 232
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 171 CVILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNA 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
+ GA V +P+FE K LE +E+H VT VP + L + V+ + S++
Sbjct: 231 SVQSGATLVLVPRFEPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNYD-ISSLRVA 286
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 287 VSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG--------- 334
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 407
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 -----------SVGQPIQGVEVKVVDLDGHALPVGEEGEIIVRGHNVMKGYLD----RPE 379
Query: 408 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 380 VTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMV 439
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 440 AVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFK 482
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR FV R+ P+++TGKI + E++ E+
Sbjct: 483 YPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|219667086|ref|YP_002457521.1| AMP-dependent synthetase/ligase [Desulfitobacterium hafniense
DCB-2]
gi|219537346|gb|ACL19085.1| AMP-dependent synthetase and ligase [Desulfitobacterium hafniense
DCB-2]
Length = 528
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/562 (26%), Positives = 261/562 (46%), Gaps = 87/562 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+ + + ++ T Q+ V LA LL++G+ GD + NS +E A+A IG
Sbjct: 19 DKIALVCKDKRLTYQELNCRVNALAHALLDLGIGKGDKIGYLFPNSMEIVELFFAIAKIG 78
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS---- 137
I PLN+R +E + S+ + V D E++ + +++ + LG
Sbjct: 79 AIAVPLNHRLVAREIKCLLDSVECDVFVYSRLYDGPVSEVK-GSFRTVKHIIRLGEPAPG 137
Query: 138 --SSSDFVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
S + +D DI G R I FT GTTG KGV+ +H
Sbjct: 138 EYSFEKLLEHKDTSEPDIAVDSGDLFR---------------IQFTGGTTGRSKGVMRTH 182
Query: 194 SALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSA 251
A + Q++ + +G D+V L +PL H GG++ + +++ GA V F+
Sbjct: 183 EADLFQTIGVMTSNKMGASPDEVVLTQSPLHHQGGITWMLCVMVTGAQFVICDGFDPVEI 242
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SVKKILNGGGGLPSELMKEA 307
L +EQ VT ++ +P +T +R+ RD SVK + GG ++++
Sbjct: 243 LRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDVSSVKVVHTSAGGTSPAIIQKM 297
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV-CVG 366
+FP ++ +G TET + T++ T E ++H P+ +G
Sbjct: 298 AEAFPNCEVYYGWGQTETGAG----TVHRITREM--------------ALHHPEKTQSIG 339
Query: 367 KPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
+P P +L++ + VG + +G + Y+ Q P ++ G + W TG
Sbjct: 340 RPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYKQ----PELTDGTIADGWTRTG 395
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP ++ V+G+ + E V
Sbjct: 396 DMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPAVLDCSVIGVPDQTFGEAV 455
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
+A V+LR + + ++ +++HC+ ++L+ +K PR +V + FP+
Sbjct: 456 MAVVKLRAGYTAAAAD----------------IQEHCK-RDLSSYKKPR-YVEFLDEFPV 497
Query: 539 TSTGKIRRDEVR---REVMSHL 557
S GKI++ ++R RE+ SHL
Sbjct: 498 DSAGKIQKFKLRKKYREIYSHL 519
>gi|451972653|ref|ZP_21925858.1| Acyl-CoA synthetase [Vibrio alginolyticus E0666]
gi|451931469|gb|EMD79158.1| Acyl-CoA synthetase [Vibrio alginolyticus E0666]
Length = 513
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 255/569 (44%), Gaps = 84/569 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K + I G+ T QF +A L+ G+ GD +A+S N
Sbjct: 3 NLAAALQRNAASKPDKTALICGDVEITYAQFDAITGKIAASLINKGVVPGDRIALSCPNI 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
++ A+ G + PLN + R + ++S +Y + TA +
Sbjct: 63 PFFAFVYYAIQKAGAVAVPLN----------VLLKAREIKYHLEDSKAKFYFCFEGTAEL 112
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTAD----------ILKGYSLRSLPFTHSWAPEGA--- 173
P + V +D ++T L + + P + + P A
Sbjct: 113 PMAKEGVK-AFEQADICENMVVMTQSQSENEWNGVPTLNAFIADAEPLS-DYVPRNADDT 170
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 232
+I +TSGTTG PKG ++ +I+ +L I+G DD++L T PL H G + + A
Sbjct: 171 CVILYTSGTTGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNA 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
++ GA V +P+FE K LE +E+H VT VP + L + V+ + S++
Sbjct: 231 SVLGGATLVLVPRFEPKHVLELMEKHKVTLFAGVPTMYIGL---LHVQHQFD-TSSLRVA 286
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
++GG LP+E+ + F ++ YG++ETS F L + PG
Sbjct: 287 ISGGAPLPTEIFRSFEEQF-NVPILEGYGLSETSPIACFNHLDQERI--PG--------- 334
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 407
VG+P VE+KV +G++ G I+ RG +VM Y D +P
Sbjct: 335 -----------SVGQPIQGVEVKVVDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPE 379
Query: 408 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
V+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP I +
Sbjct: 380 VTESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAISMV 439
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
V+GI N E + A V L+ + +E L++ +E+ L FK
Sbjct: 440 AVIGIPNEEYGEEIKAYVVLKPGE----------------YIDAETLQKWGKEQ-LASFK 482
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR +V R+ P+++TGKI + E++ E+
Sbjct: 483 YPR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|384567576|ref|ZP_10014680.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
gi|384523430|gb|EIF00626.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora glauca K62]
Length = 548
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 253/561 (45%), Gaps = 73/561 (13%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL- 75
A +R+++V R T ++FV DV LA GLL G++ GD V I + N EW L
Sbjct: 34 AYPERDALVDHATGRRWTYREFVADVDALALGLLARGVKKGDRVGIWSPNCP---EWTLL 90
Query: 76 --AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP---SL 129
A A IG I+ +N + E + LV+ E S Y + P SL
Sbjct: 91 QYASAKIGAILVNINPAYRSHELEYVLNQAGVSTLVSAERFKTSDYAGMIREVRPRCASL 150
Query: 130 RWHVSLGSS--SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
V +G +S R A++ + +R+ + + I +TSGTTG PK
Sbjct: 151 TDVVLIGGDDWNSLLTTGRAADPAELAR---VRA-----ELGADDPINIQYTSGTTGFPK 202
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPK 245
G +SH ++ + GY E+D P H G+ +A GAC V P
Sbjct: 203 GATLSHHNILNNGFFVGELCGYTEEDRICIPVPFYHCFGMVMGNLAATSHGACMVIPAPA 262
Query: 246 FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSE 302
F+ K LEAV+ TSL VP + +A+LA ++ D S++ + G P E
Sbjct: 263 FDPKKTLEAVQAERCTSLYGVPTMFIAELA-----DPDFEDYDLTSLRTGIMAGSPCPVE 317
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+MK+ A++ YGMTETS ++ T D +LE +
Sbjct: 318 VMKQVIERMGMAEVSICYGMTETSP-VSTQTRADDSLER-------------------RV 357
Query: 363 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VGK PH+E+K+ + G + TRG VML YW+Q V W+
Sbjct: 358 STVGKVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMH 417
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E
Sbjct: 418 TGDLAVMDDDGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDPKYGE 477
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
++A VR+R+ + L++E LR+ C K L +K PR +V F
Sbjct: 478 ELMAWVRMRDGAE---------------PLTAESLREFCTGK-LAHYKIPR-YVHVVDEF 520
Query: 537 PLTSTGKIRRDEVRREVMSHL 557
P+T TGKIR+ E+R + L
Sbjct: 521 PMTVTGKIRKVEMRERAVELL 541
>gi|338999710|ref|ZP_08638348.1| acyl-CoA synthetase [Halomonas sp. TD01]
gi|338763390|gb|EGP18384.1| acyl-CoA synthetase [Halomonas sp. TD01]
Length = 567
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 160/577 (27%), Positives = 253/577 (43%), Gaps = 88/577 (15%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EW 69
+IAA + ++++ + N H + +Q ++V AR LL IG++ GD VAI A N EW
Sbjct: 29 FDQIAAQYPENDALIALHQNIHWSYRQLQEEVNRCARALLAIGVKKGDRVAIWAPNCYEW 88
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT-----------------DE 112
L A A IG I+ +N + E A+ L+T E
Sbjct: 89 TLTQ-FATAKIGAILVNINPSYRTHELDYALNQSGARFLITANQFKSSDYTAMLFELAPE 147
Query: 113 SSDSWYLELQHTAIPSLRWHVSLGSSS-------SDFV---NKRDMLTADILKGYSLRSL 162
++S +L+ +P L ++L S DF+ NK D L+ +L
Sbjct: 148 LNNSAEGQLKAQKLPDLECIINLSSDKHHGMWRWEDFIQEANKVSQTDVDDLQA----TL 203
Query: 163 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 222
F + + I +TSGTTG PKG +SH ++ +G+ +D + PL
Sbjct: 204 QF------DDPINIQYTSGTTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLY 257
Query: 223 HIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
H G+ M + P F+ L+AV + T+L VP + +A L
Sbjct: 258 HCFGMVMGNLGCMTHGAAMIYPDEGFDPGKVLKAVHEQKATALYGVPTMF--IAELEHPD 315
Query: 281 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
S++ + G P+E+MK+ + AYGMTETS T
Sbjct: 316 FATTDFSSLRTGIMAGSICPAEIMKQVIEKMNMKGVQIAYGMTETSPVST---------- 365
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHV 394
N + + VG+ PH+E K+ G+ +G + TRG V
Sbjct: 366 ----------QTGANDTIEKRVSTVGRTQPHLESKIVDPGNGGILPRGEIGELCTRGYSV 415
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
ML+YW+ A W+ TGD+ ++D+ G + +VGR + GGENVYP+E+E
Sbjct: 416 MLKYWNNDKATTEAIDEAGWMHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEF 475
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L HP I + V G+ + + E ++A V+L + S D ++ E LR++
Sbjct: 476 LYAHPAISEVQVTGVPDKKYGEELIAWVKL------NSSAGD---------VTGEDLREY 520
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
C+ K +T FK PR F + FP+T TGKI++ ++R
Sbjct: 521 CKGK-ITHFKIPRYFKFVDE-FPMTVTGKIQKFKMRE 555
>gi|404259900|ref|ZP_10963203.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403401568|dbj|GAC01613.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 551
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 244/553 (44%), Gaps = 75/553 (13%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPL 87
R T +F +DV LA GLL +G+ GD V + A N EW+L A A IG I+ L
Sbjct: 50 RQWTYAEFHRDVRALAAGLLRLGVVKGDRVGLWAPNR---FEWVLVQYATAEIGAILVNL 106
Query: 88 NYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSLGSSSSDFV 143
N + E A+ S V+L + DS Y + A P LR V+ S++
Sbjct: 107 NPAYRQNEVEYALKQSGTSVVLAAERFKDSGYESMLAEARPHCPDLREVVTFESAAWT-- 164
Query: 144 NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 203
LTA R S + + + I +TSGTTG PKG +SH +
Sbjct: 165 ----ELTAAPSDEELARVAEIAASLSADDPINIQYTSGTTGFPKGATLSHRNIGNNGYLV 220
Query: 204 IAIVGYGEDDVYLHTAPLCHIGGL--------SSAMAMLMVGACHVFIPKFESKSALEAV 255
++ Y DD P H G+ S AM++ G P F+ K+ L+AV
Sbjct: 221 GELLDYTADDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPG------PAFDPKATLDAV 274
Query: 256 EQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPSELMKEATNSFPK 313
+H TSL VP + +A+LA L + + S++ + G P ++M++ +
Sbjct: 275 AEHRCTSLYGVPTMFIAELALLDAAPEGYAPDLSSLRTGIMAGSPCPEQVMRQVVDRMHM 334
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ YGMTETS T + DP + VG+ PH+E
Sbjct: 335 SEVSICYGMTETSPVSTQTRVDDPL--------------------DLRVTTVGQVGPHLE 374
Query: 374 LKVCSDG------SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + G + G + TRG VM YW+ E W+ TGD+ +DD G
Sbjct: 375 IKIVAPGMGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDSEGWMHTGDLAEMDDAG 434
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A +RLR
Sbjct: 435 YVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLR-- 492
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ D ++++ ++ R K PR +V K FP+T TGK+R+
Sbjct: 493 ----DHATDLTAEDVRAFADGKIARH----------KIPR-YVHVVKEFPMTVTGKVRKV 537
Query: 548 EVRREVMSHLKSL 560
+R E L+ L
Sbjct: 538 AMREEATHILEDL 550
>gi|89897044|ref|YP_520531.1| hypothetical protein DSY4298 [Desulfitobacterium hafniense Y51]
gi|89336492|dbj|BAE86087.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 528
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 147/562 (26%), Positives = 260/562 (46%), Gaps = 87/562 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+ + + ++ T Q+ V LA LL++G+ GD + NS +E A+A IG
Sbjct: 19 DKIALVCKDKRLTYQELNCRVNALAHALLDLGIGKGDKIGYLFPNSMEIVELFFAIAKIG 78
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS---- 137
I PLN+R +E + S+ + V D E++ + +++ + LG
Sbjct: 79 AIAVPLNHRLVAREIKCLLDSVECDVFVYSRLYDGPVSEVK-GSFRTVKHIIRLGEPAPG 137
Query: 138 --SSSDFVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
S + +D DI G R I FT GTTG KGV+ +H
Sbjct: 138 EYSFEKLLEHKDTSEPDIAVDSGDLFR---------------IQFTGGTTGRSKGVMRTH 182
Query: 194 SALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSA 251
A + Q++ + +G D+V L +PL H GG++ + +++ GA V F+
Sbjct: 183 EADLFQTIGVMTSNKMGASPDEVVLTQSPLHHQGGITWMLCVIVTGAQFVICDGFDPVEI 242
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SVKKILNGGGGLPSELMKEA 307
L +EQ VT ++ +P +T +R+ RD SVK + GG ++++
Sbjct: 243 LRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDVSSVKVVHTSAGGTSPAIIQKM 297
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV-CVG 366
+FP ++ +G TET + T++ T E ++H P+ +G
Sbjct: 298 AEAFPNCEVYYGWGQTETGAG----TVHRITREM--------------ALHHPEKTQSIG 339
Query: 367 KPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
+P P +L++ + VG + +G + Y+ Q P ++ G + W TG
Sbjct: 340 RPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYKQ----PELTDGTITDGWTRTG 395
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP ++ V+G+ + E V
Sbjct: 396 DMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPAVLDCSVIGVPDQTFGEAV 455
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
+A V+LR + + ++ +++HC+ ++L+ +K PR +V + FP+
Sbjct: 456 MAVVKLRSGYTATAAD----------------IQEHCK-RDLSSYKKPR-YVEFLDEFPV 497
Query: 539 TSTGKIRRDEVR---REVMSHL 557
S GKI++ +R RE+ SHL
Sbjct: 498 DSAGKIQKFRLRKKYREIYSHL 519
>gi|357410305|ref|YP_004922041.1| AMP-dependent synthetase/ligase [Streptomyces flavogriseus ATCC
33331]
gi|320007674|gb|ADW02524.1| AMP-dependent synthetase and ligase [Streptomyces flavogriseus ATCC
33331]
Length = 535
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 244/547 (44%), Gaps = 65/547 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R ++V + R T +F V LARGL+ G+ GD V I ALN EW+L A
Sbjct: 33 EREALVDVVSGRRWTYTEFGAAVEELARGLMASGVAKGDRVGIWALNCP---EWVLVQYA 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL-ELQHTAIPSLRWH 132
A IG ++ +N + E S + +LV +SD L E P+LR
Sbjct: 90 TARIGAVMVTINPAYRAHELSYVLEQAGISLLVASLAHRTSDYRALVEEVRADCPALRSV 149
Query: 133 VSLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+G S D D +TA+ L +LR + + + I +TSGTTG PKG +
Sbjct: 150 HYIGDPSWDELTAAADTVTAEEL---ALREAGLSC----DDPINIQYTSGTTGFPKGATL 202
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESK 249
SH ++ +V Y E+D P H G+ + + GAC V P FE
Sbjct: 203 SHHNILNNGYFVGEMVAYTEEDRVCLPVPFYHCFGMVMGNLGITSHGACIVIPAPAFEPA 262
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AVE+ TSL VP + +A L S++ + G P E+MK
Sbjct: 263 AVLAAVERERCTSLYGVPTMF--IAELALPGFASYDLSSLRTGIMAGSPCPVEVMKRVVA 320
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ YGMTETS ++ T D LE + VG+
Sbjct: 321 EMHMDEVSICYGMTETSP-VSTQTRRDDDLER-------------------RTGTVGRVM 360
Query: 370 PHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+KV + G + TRG VML YWDQ V W+ TGD+ +
Sbjct: 361 PHIEVKVIDPVTGVTLPRGEAGELCTRGYSVMLGYWDQPERTAEVVDAGRWMHTGDLAVM 420
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
+ G V +VGR I GGENVYP E+E L HP I+ + VVG+ +AR E ++ACV
Sbjct: 421 REDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPKIVDVQVVGVPDARYGEEILACV- 479
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
D + ++ L +CRE+ L +K PR + + FP+T +GK
Sbjct: 480 ------IPLDPADPPTLDE--------LTVYCRER-LAHYKIPRELRILQA-FPMTVSGK 523
Query: 544 IRRDEVR 550
+R+ E+R
Sbjct: 524 VRKVELR 530
>gi|398993085|ref|ZP_10696042.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398135679|gb|EJM24788.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 522
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 242/530 (45%), Gaps = 58/530 (10%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q V LA L +G+ S + VA+ +LNS+ ++E+ LAV + ++ P+N RWS
Sbjct: 28 TFAQLGDRVARLAGALQALGVASDERVAMLSLNSQRFIEYYLAVPWADAVLNPVNIRWSA 87
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E ++ + +L+ D++ + ++ TA +LR + G + A +
Sbjct: 88 AEIVYSLDDSQTSVLIVDDTFLALAEKIGSTA-KTLRLMIYAGDGET---------PAGM 137
Query: 154 LKGYSL--RSLPFTHSWAPEGAVI-ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 210
L SL P + +++ + +T GTTG PKGV++SH+ + +LA + +G
Sbjct: 138 LNYESLIANHAPVEDARRGGDSLLGLFYTGGTTGFPKGVMLSHNNIGFSALAVLGQALFG 197
Query: 211 EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM 270
VYLH P+ H+ L++ +A+ + G HV +P F+ + ALE + + + P ++
Sbjct: 198 PHTVYLHAMPMFHLADLAAMVALFISGGTHVVLPAFKPREALELISGEQASDTLLAPTMI 257
Query: 271 ADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSS 328
L D +++I G + L+ A +F A YGMTE S S
Sbjct: 258 QMLLDAREADPAVAVLDLSPLREITYGASVISPALLDRARRAFSAADFQQGYGMTEMSPS 317
Query: 329 LTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG--VCVGKPAPHVELKVCSDGSSH--- 383
++ + P +A HQ G G P VE+++
Sbjct: 318 ISLL--------APEHHSEA---------HQRSGKMYSAGLPINCVEVRIVDSEDREVPR 360
Query: 384 --VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKS 441
VG ++ RG +VML YW++ A G W+ TGD G +D+ G +++ R I S
Sbjct: 361 GTVGEVVARGPNVMLGYWNKPEATAETLRGG-WMHTGDGGYMDEDGFIYICDRLKDMIVS 419
Query: 442 GGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKN 501
GGEN++ EVE+ + HP + V+GI + E V A + R
Sbjct: 420 GGENIFTAEVESAIASHPAVAQCAVIGIPCDKWGESVHAVIVCR---------------- 463
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
E +S + HCRE+ + +K PR L R PL+S GK+ + E+R+
Sbjct: 464 AESCISEHEIISHCRER-IASYKVPRSVEL-RDTLPLSSVGKVLKTELRK 511
>gi|392406245|ref|YP_006442855.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|315024178|gb|ADT71659.1| putative acyl-CoA synthetase [Mycobacterium chubuense NBB4]
gi|390619381|gb|AFM20530.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 543
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 169/578 (29%), Positives = 266/578 (46%), Gaps = 78/578 (13%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R A + R+++V R T Q+F + V +A GLLE G+ GD V I A N
Sbjct: 21 IGENLERTARLFADRDALVECWTGRRWTYQEFARQVDAVASGLLETGIAKGDRVGIFAPN 80
Query: 67 -SEW-YLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQH 123
+EW +L++ A A +G I+ +N + E + S +++ D S Y+ +
Sbjct: 81 CAEWTFLQY--ATAKVGAILVNINPAYRAHELEYVLNQSGVKLLIAADRFKSSDYVAMIT 138
Query: 124 TAIP---SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
P +L+ V LG + + +R AD R L + + + I +TS
Sbjct: 139 ELRPRCDALQDVVVLGGEDWEALMERGR-NAD-----PRRLLMEAELLSADDPINIQYTS 192
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGAC 239
GTTG PKG +SH ++ + GY E D P H G+ +A GAC
Sbjct: 193 GTTGFPKGATLSHQNILNNGFFVGELCGYSEADRICIPVPFYHCFGMVMGNLAATSHGAC 252
Query: 240 HVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNG 295
V P FE+++ L+A+E TSL VP + +A+LA + D S++ +
Sbjct: 253 MVIPAPSFEARTTLQAIETERCTSLYGVPTMFIAELA-----DSAFGDFDLTSLRTGIMA 307
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK+ + ++ YGMTETS ++ T D ++E
Sbjct: 308 GSPCPVEVMKQVLDRMGITEITICYGMTETSP-VSIQTRADDSIER-------------- 352
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 409
+ VG PH+E+K+ + G + TRG VML YW+ +P +
Sbjct: 353 -----RVSTVGTVHPHLEIKIVDPETGATVLRGSPGELCTRGYSVMLGYWE----RPDWT 403
Query: 410 TGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+G + W+ TGD+ +DD G V ++GR + GGEN+YP E+E L HP I+ +
Sbjct: 404 SGAIDAARWMHTGDLAVMDDAGYVSIIGRNKDMVIRGGENLYPREIEEFLYTHPEIVDVQ 463
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V+G+ + + E ++A +R++E Q L+ E L C K L +K
Sbjct: 464 VIGVPDPKYGEELMAWIRMKEGAQ---------------PLTREDLHGFCAGK-LAHYKI 507
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 563
PR + FP+T TGK+R+ E+ RE+ L LP
Sbjct: 508 PR-YAHVVDEFPMTVTGKVRKVEM-REIAIRLLKLPEQ 543
>gi|254230509|ref|ZP_04923881.1| Acyl-CoA synthetases [Vibrio sp. Ex25]
gi|262393852|ref|YP_003285706.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
gi|151936957|gb|EDN55843.1| Acyl-CoA synthetases [Vibrio sp. Ex25]
gi|262337446|gb|ACY51241.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. Ex25]
Length = 513
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 255/569 (44%), Gaps = 84/569 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K + I G+ T QF +A L+ G+ GD +A+S N
Sbjct: 3 NLAAALQRNAASKPDKTALICGDVEITYAQFDAITGKIAASLINKGVVPGDRIALSCPNI 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
++ A+ G + PLN + R + ++S +Y + TA +
Sbjct: 63 PFFAFVYYAIQKAGAVAVPLN----------VLLKAREIKYHLEDSKAKFYFCFEGTAEL 112
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTAD----------ILKGYSLRSLPFTHSWAPEGA--- 173
P + V +D ++T L + + P + + P A
Sbjct: 113 PMAKEGVK-AFEQADICENMVVMTQSQSENEWNGVPTLNAFIANAEPLS-DYVPRNADDT 170
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 232
+I +TSGTTG PKG ++ +I+ +L I+G DD++L T PL H G + + A
Sbjct: 171 CVILYTSGTTGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNA 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
++ GA V +P+FE K LE +E+H VT VP + L + V+ + S++
Sbjct: 231 SVLGGATLVLVPRFEPKHVLELMEKHKVTLFAGVPTMYIGL---LHVQHQFD-TSSLRVA 286
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
++GG LP+E+ + F ++ YG++ETS F L + PG
Sbjct: 287 ISGGAPLPTEIFRAFEEQF-NVPILEGYGLSETSPIACFNHLDQERI--PG--------- 334
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 407
VG+P VE+KV +G++ G I+ RG +VM Y D +P
Sbjct: 335 -----------SVGQPIQGVEVKVVDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPE 379
Query: 408 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
V+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP I +
Sbjct: 380 VTESALQNGWFHTGDVGRFDCSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAISMV 439
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
V+GI N E + A V L+ + +E L++ +E+ L FK
Sbjct: 440 AVIGIPNEEYGEEIKAYVVLKPGE----------------YIDAETLQKWGKEQ-LASFK 482
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR +V R+ P+++TGKI + E++ E+
Sbjct: 483 YPR-YVEIREHLPMSATGKILKRELKSEL 510
>gi|374620358|ref|ZP_09692892.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
gi|374303585|gb|EHQ57769.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [gamma
proteobacterium HIMB55]
Length = 560
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 249/551 (45%), Gaps = 70/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGIVAPLNYRWS 92
T + + V LA GL+ +G+ GD V I NS EW L LA A +G I+ +N +
Sbjct: 49 TYSELQRRVDQLAAGLISLGIEPGDRVGIWGPNSAEWVLTQ-LATAKMGAIMVCINPAYR 107
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLELQHT----------------AIPSLRWHVSL 135
E A+ + L+TDE S YL + HT +P L+ + +
Sbjct: 108 LYELEYALNKVECKALITDEQFKTSDYLGMLHTLAPELEQCAPGQLEAAKLPHLKHIIRM 167
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHS-WAPEGAVIICFTSGTTGSPKGVVISHS 194
GS S + D + AD G L +L S P+ A+ I FTSGTTG+PKG +SH
Sbjct: 168 GSGKSPGMYNFDEVCADASDG-DLSALADLQSKLKPDDAINIQFTSGTTGNPKGATLSHC 226
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSAL 252
++ + D PL H G+ A +A + G+ VF + F+ + L
Sbjct: 227 NILNNGYLTGEAMRLTPADKLCIPVPLYHCFGMVLAVLACISHGSTMVFPGEAFDPEQTL 286
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+ V+ T+L VP + + L S++ + G P E+MK +
Sbjct: 287 QTVQDEQCTALHGVPTMF--ITELDHPNFGHFDLSSLRTGIMAGAPCPVEVMKRVISEMH 344
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
++ AYG TE S + MTL D +L+ + VG+ P V
Sbjct: 345 MQDILIAYGQTELSP-INNMTLPDDSLKRRTE-------------------TVGRAMPWV 384
Query: 373 ELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ D + HV G I TRG VM YW+ WL +GDI ++D
Sbjct: 385 EIKII-DEAGHVVPVGQKGEICTRGYSVMQGYWNDPEKTAETIDASGWLHSGDIATMDAS 443
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V +VGR I GGEN+YP EVE L QHP I + V GI + ++ E V A ++L E
Sbjct: 444 GYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAITEVQVFGIPDEKMGEEVCAWIQLNE 503
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L+++ ++ +C+++ +T FK PR + + +P+T TGKI++
Sbjct: 504 GAD----------------LTADDVKAYCKDQ-ITHFKVPR-HIRFVSEYPMTVTGKIQK 545
Query: 547 DEVRREVMSHL 557
+R E+++ L
Sbjct: 546 FVMRDEMLALL 556
>gi|423074972|ref|ZP_17063691.1| AMP-binding enzyme [Desulfitobacterium hafniense DP7]
gi|361853921|gb|EHL06036.1| AMP-binding enzyme [Desulfitobacterium hafniense DP7]
Length = 528
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/562 (25%), Positives = 259/562 (46%), Gaps = 87/562 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+ + + ++ T Q+ V LA LL++G+ GD + NS +E A+A IG
Sbjct: 19 DKIALVCKDKRLTYQELNCRVNALAHALLDLGIGKGDKIGYLFPNSMEIVELFFAIAKIG 78
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS---- 137
I PLN+R +E + S+ + V D E++ + +++ + LG
Sbjct: 79 AIAVPLNHRLVAREIKCLLDSVECDVFVYSRLYDGPVSEVK-GSFRTVKHIIRLGEPAPG 137
Query: 138 --SSSDFVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
S + +D DI G R I FT GTTG KGV+ +H
Sbjct: 138 EYSFEKLLEHKDTSEPDIAVDSGDLFR---------------IQFTGGTTGRSKGVMRTH 182
Query: 194 SALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSA 251
A + Q++ + +G D+V L +PL H GG++ + +++ GA V F+
Sbjct: 183 EADLFQTIGVMTSNKMGASPDEVVLTQSPLHHQGGITWMLCVMVTGAQFVICDGFDPVEI 242
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SVKKILNGGGGLPSELMKEA 307
L +EQ VT ++ +P +T +R+ RD SVK + GG ++++
Sbjct: 243 LRQIEQERVTYMLLLPP-----STYLRLIDAPVFRDYDVSSVKVVHTSAGGTSPAIIQKM 297
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV-CVG 366
+FP ++ +G TET + T++ T E ++H P+ +G
Sbjct: 298 AEAFPNCEVYYGWGQTETGAG----TVHRITREM--------------ALHHPEKTQSIG 339
Query: 367 KPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
+P P +L++ + VG + +G + Y+ Q P ++ G + W TG
Sbjct: 340 RPMPFFQLRIVDEAGKDVPLGEVGEGIAKGPAIFSGYYKQ----PELTDGTITDGWTRTG 395
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP ++ V+G+ + E V
Sbjct: 396 DMMRQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPAVLDCSVIGVPDQTFGEAV 455
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
+A V+LR + + ++ +++HC+ ++L+ +K PR +V + FP+
Sbjct: 456 MAVVKLRSGYTATAAD----------------IQEHCK-RDLSSYKKPR-YVEFLDEFPV 497
Query: 539 TSTGKIRRDEVR---REVMSHL 557
S GKI++ +R RE+ SH
Sbjct: 498 DSAGKIQKFRLRKKYREIYSHF 519
>gi|444430996|ref|ZP_21226167.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443888045|dbj|GAC67888.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 548
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 156/552 (28%), Positives = 247/552 (44%), Gaps = 69/552 (12%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAF 79
++V + +R T ++ + DV LA GLL++G+ +GD V I A N EW+L A A
Sbjct: 43 ALVDVPTDRRWTYRELLTDVDALASGLLDLGITTGDRVGIWAPNCA---EWVLVQYATAR 99
Query: 80 IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVS 134
IG I+ +N + +E S + IR ++ + S Y + H P L +
Sbjct: 100 IGAILVTINPAYRTEELSYVLRQAGIR-TLICAPQFKSSDYPAMAHQVRADCPDLLDVLV 158
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+G D V+ TA I + + AP+ A+ I +TSGTTG PKG +SH
Sbjct: 159 IGDDQWDQVSHGSDTTASIEE--------IGQTLAPDDAINIQYTSGTTGFPKGATLSHR 210
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSAL 252
++ +V Y DD P H G+ + A + IP F+ + L
Sbjct: 211 NILNNGYFVGELVHYTPDDRICVPVPFYHCFGMVMGNLAALTHAARIVIPAPAFDPAATL 270
Query: 253 EAV-EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
AV ++HC TSL VP + +A L T S++ + G P E MK+ ++
Sbjct: 271 RAVADEHC-TSLYGVPTMF--IAMLNDPVLTDLDTSSLRTGIMAGSPCPIETMKQVIDTM 327
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS P + T +S+H+ + VG PH
Sbjct: 328 GIEEISICYGMTETS-------------------PVSAQTRTDDSIHR-RTATVGAAGPH 367
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+ + + + G + TRG VML YW+Q + W+ TGDI +DD
Sbjct: 368 IEISIVDPVTREILPRGEAGELCTRGYSVMLGYWEQPDKTAEAIDADRWMHTGDIAVMDD 427
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR + GGEN+YP E+E L+ HP + + V+G+ + + E ++A +++R
Sbjct: 428 DGYLSITGRIKDMVIRGGENLYPREIEEFLITHPDVQDVQVIGVPDEKYGEELMAWIQMR 487
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
L +R C + L K PR +V FP+T TGK+R
Sbjct: 488 AG---------------TTALDVHTVRAFC-DGRLARHKIPR-YVHVVDAFPITITGKVR 530
Query: 546 RDEVRREVMSHL 557
+ E+R + + L
Sbjct: 531 KVEMRAQAATML 542
>gi|409393138|ref|ZP_11244621.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403197125|dbj|GAB87855.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 551
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 162/558 (29%), Positives = 247/558 (44%), Gaps = 63/558 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R +++ R T +F +DV LA GLL G++ GD V + A N EW+L A
Sbjct: 39 DRVALIDAPSGRRWTYVEFHRDVRALAAGLLRSGVKKGDRVGLWAPNR---FEWVLVQYA 95
Query: 77 VAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWH 132
A IG I+ LN + E S A+ S V+L + DS Y + A P LR
Sbjct: 96 TAEIGAILVNLNPAYRQNEVSYALKQSGTSVVLAAERFKDSGYASMLAEARPDCPDLREV 155
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V+ S + LTA R S + + + I +TSGTTG PKG +S
Sbjct: 156 VTFESVAWT------ELTAAPSDEELARVAEIAASLSADDPINIQYTSGTTGFPKGATLS 209
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKS 250
H + ++ Y DD P H G + +A GA V P F+ K+
Sbjct: 210 HRNIGNNGYLVGELLDYTADDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPGPAFDPKA 269
Query: 251 ALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWK-GRDSVKKILNGGGGLPSELMKEAT 308
L+AV ++ TSL VP + +A+LA L + S++ + G P ++M++
Sbjct: 270 TLDAVAEYRCTSLYGVPTMFIAELALLDAAPDGYAPDLSSLRTGIMAGSPCPEQVMRQVV 329
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+ +++ YGMTETS T + DP + + VG+
Sbjct: 330 DRMHMSEVSICYGMTETSPVSTQTRVDDPL--------------------ELRVTTVGQV 369
Query: 369 APHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+K+ + G+ + G + TRG VM YW+ + W+ TGD+
Sbjct: 370 GPHLEIKIVAPGTGETLGRNETGELCTRGYSVMTGYWNDPEKTAEAIDADGWMHTGDLAE 429
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+DD G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A V
Sbjct: 430 MDDAGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWV 489
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
RLR + D + ++ ++ R K PR +V K FP+T TG
Sbjct: 490 RLR------DHATDLTVEDVRAFADGKIARH----------KIPR-YVHVVKEFPMTVTG 532
Query: 543 KIRRDEVRREVMSHLKSL 560
KIR+ +R E L+ L
Sbjct: 533 KIRKVAMREEATHILEDL 550
>gi|239991727|ref|ZP_04712391.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291448729|ref|ZP_06588119.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291351676|gb|EFE78580.1| acyl-CoA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 547
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 241/562 (42%), Gaps = 71/562 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R AA R ++V + R T +FV DV LAR L+ G+ GD V I A+N
Sbjct: 20 IGRNLDRTAAAHGDREALVDVASGRRWTYTEFVADVDELARALMASGVAKGDRVGIWAVN 79
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL- 119
EW+L A A IG ++ +N + E + +L+ +SD L
Sbjct: 80 CP---EWVLVQYATARIGAVMVTVNPAYRAHEVEFVLKQAGISLLIASLAHRTSDYRALV 136
Query: 120 ELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
+ P LR +G S ++ +T D L + + V I +
Sbjct: 137 DEVRGNCPDLRAVHYIGDPSWAELTAAAPAVTRDELAAREA-------ELSCDDPVNIQY 189
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 237
TSGTTG PKG +SH ++ + Y E D P H G+ +A G
Sbjct: 190 TSGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLAATSHG 249
Query: 238 ACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
AC V P FE + L AV+Q TSL VP + +A L S++ + G
Sbjct: 250 ACIVIPGPSFEPATVLAAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGIMAG 307
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
P+E+MK A++ YGMTETS T D G
Sbjct: 308 SPCPAEVMKRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLARRTGT------------ 355
Query: 357 VHQPQGVCVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAKPSV 408
VG+ PH+E+KV GSS G + TRG VML YWDQ V
Sbjct: 356 --------VGRVLPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRTAEV 405
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
W+ TGD+ + + G V +VGR I GGENVYP E+E L HP I + VVG
Sbjct: 406 IDAGRWMHTGDLAVMGEDGYVQVVGRIKDMIIRGGENVYPREIEEFLHGHPKIADVQVVG 465
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + R E ++ACV R+ + E L +HCRE+ L +K PR
Sbjct: 466 VPDERYGEEILACVIPRDPADPP---------------TLEELTEHCRER-LAHYKIPRR 509
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
+ + FP+T +GK+R+ E+R
Sbjct: 510 LRIL-ETFPMTVSGKVRKIELR 530
>gi|392957198|ref|ZP_10322722.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
gi|391876605|gb|EIT85201.1| AMP-binding domain protein [Bacillus macauensis ZFHKF-1]
Length = 539
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 255/554 (46%), Gaps = 70/554 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +VV N T + F + +A+GLL G++ GD +A+ A N EW+L
Sbjct: 21 KEAVVYSKENIRYTYEAFYKATEAVAKGLLAAGIQKGDHIAVWATNVP---EWVLLQFGS 77
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAI------PSLR 130
A IG ++ +N + E + S ++ + D D+ Y+E+ + P L
Sbjct: 78 ARIGAVLVTVNTSYQQAELEYLLKQSDTKMLFLIDGYRDASYVEMAQEVMRKKEQFPLLE 137
Query: 131 WHVSLGSSSSDFVNKRDMLTADILKGYSLRS---LPFTHSWAPEGAVIICFTSGTTGSPK 187
V +G S + D L +L G ++ S P+ + + +TSGTTG PK
Sbjct: 138 SFVHIGPQSPQNMMSWDHL---LLNGANITDETLYTIEQSLDPDDVINMQYTSGTTGFPK 194
Query: 188 GVVISHSALI--VQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIP 244
GV+++H+ ++ + LA+ A+ ED + + P H G + + + GA V I
Sbjct: 195 GVMLTHNNVLGNAERLAE-AMKLTAEDSLCI-PVPFFHCFGCVIGTLTAMTAGATMVPIV 252
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
+F + L+ VE+ T+L VP + +A L + + S++ + G P E+M
Sbjct: 253 QFNPRDVLQTVEKEKCTALHGVPTMF--IAELNDEQFSQFDLSSLRTGVMAGSTCPIEVM 310
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K+ N+ +++ AYG TETS T DP + +
Sbjct: 311 KKVINAMGMSEITIAYGQTETSPVFTQTRPEDPI--------------------EKRVKT 350
Query: 365 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VGK P VE+KV ++ G + TRG HVM Y+ A + E WL TG
Sbjct: 351 VGKKHPGVEIKVVDPVTNEEVAIGQPGELCTRGYHVMKGYYKMPDATMAAIDQEGWLHTG 410
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ +D+ G V + GR I GGEN+YP EVE L HP I+ + V+G+ + + E V
Sbjct: 411 DLAVMDEDGYVTITGRLKDMIIRGGENIYPREVEEFLYSHPAILDVQVIGVPDEKYGEKV 470
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A +RL+E Q +S+E + +C + FK P ++ + K +P+
Sbjct: 471 AASIRLKEGKQ----------------VSAEEIITYCT-GQIAKFKIPE-YIFFVKEYPM 512
Query: 539 TSTGKIRRDEVRRE 552
T++GKI++ ++R E
Sbjct: 513 TASGKIQKYKLREE 526
>gi|389876556|ref|YP_006370121.1| acyl-CoA synthase [Tistrella mobilis KA081020-065]
gi|388527340|gb|AFK52537.1| acyl-CoA synthase [Tistrella mobilis KA081020-065]
Length = 527
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 160/560 (28%), Positives = 243/560 (43%), Gaps = 54/560 (9%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I L + AA + R T Q V +A L G+ GD VA NS
Sbjct: 4 IPDLLRKYAAAAPDRRALHFEGRDFTWSQTNDRVHRMASVLHGFGVGPGDRVAFLGWNSH 63
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
W +E L+ + IG I PLN+R F E I P +L+ D L A P+
Sbjct: 64 WLVETYLSPSVIGAIPVPLNHRLGFPELVGLIADCTPKILIVDRHMAETGARLM-AACPA 122
Query: 129 LRWHVSLGSSSSDFVNKRDMLTAD--ILKGYSLRSLPFTHSWAPEG-AVIICFTSGTTGS 185
L + S L+ D I G + F H + +G +I+ +TSGTTG
Sbjct: 123 LDRLIFADWDGSHPALPPGTLSYDALITAGPPVAEDRFDHLASCDGDTLILYYTSGTTGV 182
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV++SH L + + + +DV L + PL H+G S L+ GA V P+
Sbjct: 183 PKGVMLSHLNLFANAAGTGPLYEFSAEDVLLLSGPLFHLGTGSRVFTALVFGAGMVVQPR 242
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F + ++ ++ VT++ VP ++ +I + D S++ G +P L
Sbjct: 243 FRVEETMQLIQDCRVTTVTLVPTML----RMILDHPEFDRFDFSSIRCFTYGAAPMPVRL 298
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
M+ A P YGMTE S L+ +T D PG + F +
Sbjct: 299 MERAIEKVPGVTFCQGYGMTEASPVLSVLTWKD---HVPGS--RFFDKLG---------- 343
Query: 364 CVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WL 415
VG+P + +L++ +DG VG I+ RG VM YW+ +P + + +
Sbjct: 344 SVGRPIHYGDLRIVDADGRQLPVGEVGEIVIRGPQVMTGYWN----RPDETARAIRNGFY 399
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD G +D+ G ++L GR I SGGENVYP E E L +HP + V G+ +
Sbjct: 400 HTGDAGYLDEDGYLFLAGRTKEMIISGGENVYPIETENCLSRHPAVAQCAVFGLPDELWG 459
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A V L + + + EL+ CR + + FK+PR ++R+P
Sbjct: 460 ERVHAAVALHDGVE---------ADAAELI-------AWCRSQ-IADFKSPRSIDIFREP 502
Query: 536 FPLTSTGKIRRDEVRREVMS 555
PL+ T KI + +R ++
Sbjct: 503 LPLSPTNKIDKTLLRARALA 522
>gi|331696488|ref|YP_004332727.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326951177|gb|AEA24874.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 505
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 232/504 (46%), Gaps = 56/504 (11%)
Query: 55 RSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESS 114
R+G++VA+ N +LE +LA +G +V PLNYR + E + + V+LVT+E
Sbjct: 50 RTGEVVALLTYNHVEFLETVLAAGRLGAVVLPLNYRLAPDEWRYILDNAGTVVLVTEEEF 109
Query: 115 DSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV 174
EL A+P++R V LG+ + + + L AD G +P
Sbjct: 110 RGRIDELA-PALPTIRHRVLLGAGAPEGWIAYEALVAD---GAGAPPVPPGIVDDEHTLA 165
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAM 233
+ +TSGTT PKGV I+H + ++L I +G DD L PL H GGL +A
Sbjct: 166 RLMYTSGTTSRPKGVRITHGNVAWKNLGLIVELGLSADDTVLVCGPLYHCGGLDLPGLAA 225
Query: 234 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
+GA V + F++ L+A+E+ V + PA+M A L + SV+ I+
Sbjct: 226 FHMGARLVLMRSFDAAGVLDAIEREKVGIVWLAPAMMN--AVLQVPDLADRDTTSVRCII 283
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
GG +P +++ +FP AYG+TET S G+
Sbjct: 284 GGGEKMPEPVVRRILEAFPNTWFADAYGLTETVS----------------------GDTV 321
Query: 354 PNSVHQPQGV-CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKP 406
+ H + VG+P PHVE+++ + + V G I RG V YW D+
Sbjct: 322 LDREHSLSKIGSVGRPIPHVEVRIVDEQGAEVPAGELGEIALRGPKVFDGYWRDEEATAR 381
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
++ G W TGDIG +D G +++ R I SGGEN+ EVE VL +HP ++ V
Sbjct: 382 AIRDG--WFHTGDIGRLDADGFLYVEDRLKDMIISGGENIATPEVERVLYEHPAVLEAAV 439
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
V + + R E+ A V L+ + +E +R CR++ L FK P
Sbjct: 440 VAMPHERWGEVPRAVVVLKPGER----------------ADAEDIRAFCRDR-LAKFKVP 482
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVR 550
+ V + P T +GK+ + E+R
Sbjct: 483 -VAVDFLDALPRTPSGKVLKRELR 505
>gi|344174659|emb|CCA86464.1| putative o-succinylbenzoate--CoA ligase [Ralstonia syzygii R24]
Length = 497
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 235/549 (42%), Gaps = 78/549 (14%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA 76
A V + + G++ T + V A LL G+ SGD+VA+ NS +LE LA
Sbjct: 12 ARVTPQRLAVVFGDQRVTYSELASRVEACAGLLLSCGVNSGDVVALLMKNSAAFLEISLA 71
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLG 136
++ +G + P+NYR + E + +L DE EL+ A
Sbjct: 72 ISHVGAVFLPINYRLATDEVEYILRHSETKLLFVDE-------ELEDLA----------- 113
Query: 137 SSSSDFVNKRDMLTAD-------ILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGV 189
F N+ LT D L G + + P+ + +TSGTT PKGV
Sbjct: 114 ---GSFPNR---LTVDAVAQPNSCLLGGTPAQARVEQTEMPDTLFRLMYTSGTTARPKGV 167
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFES 248
+ ++S +S A I +G DD L PL H+G +A+L+VG +F+
Sbjct: 168 MQTYSNFYWKSFAHIVALGLTRDDKLLVCGPLYHVGAYDLPGVAVLLVGGMLCIQREFDP 227
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
AL A+ +T P +++ + L K G S++ ++ GG P + +
Sbjct: 228 AQALLAIGAERLTGAWLAPVMLSRI--LASAKSQEFGISSLRWVIGGGERTPEARILDFA 285
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+FP A+ I AYG+TET S T M PG+ Q G+ G+P
Sbjct: 286 EAFPVARYIDAYGLTETCSGDTMME--------PGRERQKIGST-------------GRP 324
Query: 369 APHVELKVCS-DGSSHV----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
P+V +++ S DG + + G I RG V YW + SV W TGD+G +
Sbjct: 325 VPYVAIEIRSEDGRTLLPGEHGEICIRGPKVTPGYWKEPERTASVFYPNGWFRTGDVGYL 384
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G ++L R I SGGEN+ EVE VL P I V +G+ + R E V A V
Sbjct: 385 DEDGFLYLTDRLKDMIISGGENIASSEVERVLYLLPQISEAVAIGLPDERWGEQVAAVVV 444
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
LR SE + HCR L GFK PR ++ P T +GK
Sbjct: 445 LRPGATLSEQE----------------MMSHCRSL-LAGFKVPRRLII-TDTLPRTPSGK 486
Query: 544 IRRDEVRRE 552
+ + +R +
Sbjct: 487 VLKRVLREQ 495
>gi|241589558|ref|YP_002979583.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
gi|240868270|gb|ACS65929.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 502
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 235/514 (45%), Gaps = 55/514 (10%)
Query: 47 RGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPV 106
R + G+R GD VA+ A NS+ YLE+ +AV + GG++ P N RWS E ++ +
Sbjct: 24 RSAAKPGMRDGDRVAMLARNSDRYLEYQMAVPWGGGVLNPCNTRWSASEILYSLNDSGSI 83
Query: 107 MLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSL---RSLP 163
L+ DE+ E++ A +LR V + D+ T + GY ++ P
Sbjct: 84 HLLVDETFRPLAEEIRRYAT-TLREVVC--------CDDGDVPTG--MHGYEALLAQAEP 132
Query: 164 FTHS-WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 222
T + + I +T GTTG PKGV++SH+ L LA A YLH AP+
Sbjct: 133 ATDAVRRGDDLAGIFYTGGTTGFPKGVMLSHTNLCSSGLAAHAEGLAPAGSTYLHAAPMF 192
Query: 223 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
H+ + AMA + G H +P F + L+ + + VT L+ VP ++ L +++
Sbjct: 193 HLADIGVAMAHWIEGNTHCVVPAFSPEGVLDVLARDRVTHLLLVPTMIQMLVDHPAMRQP 252
Query: 283 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM--TLYDPTLE 340
+ ++ I G + +++ A + P + AYGMTE S T + P
Sbjct: 253 -RDLSALWSIAYGASPISEAVLERAMAALPGVGFVQAYGMTELSPLATILPDVYQTPQAR 311
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD 400
T G+L A G T C VE + G+ VG ++ RG +VM YW+
Sbjct: 312 TLGKLRSA-GRAT---------FCAEVRIVDVEGQEVPRGT--VGEVIVRGPNVMQGYWN 359
Query: 401 QFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
KP + V W+ TGD G +D+ G V++V R I +GGENVY EVE + Q
Sbjct: 360 ----KPEQTAAAVRNRWMHTGDGGYMDEAGFVFVVDRMKDMIVTGGENVYSAEVENAITQ 415
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
HP + V+GI +A QW ES + +S+E L HC+
Sbjct: 416 HPAVAACAVIGIPSA----------------QWGESVHAVVVRKPGASVSTEELIAHCKT 459
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+ G+K PR PL+ GKI + E+R+
Sbjct: 460 L-IAGYKCPRSLDFC-DALPLSGAGKILKTELRK 491
>gi|433608182|ref|YP_007040551.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
gi|407886035|emb|CCH33678.1| putative acyl-CoA synthetase [Saccharothrix espanaensis DSM 44229]
Length = 554
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 248/555 (44%), Gaps = 73/555 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R ++V R T ++ V +V +A GL G+R GD V I A N +EW+L A A
Sbjct: 48 REALVECATGRRWTYRELVAEVDAVAAGLWASGVRPGDRVGIWAPNRAEWFLTQ-YATAR 106
Query: 80 IGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSW--YLELQHTAIPSLRWHVSL 135
IG ++ +N YR E A + +R ++ T + + +E P+LR V L
Sbjct: 107 IGAVLVTVNPAYRVHELEYVLAQSGVRTLVAATSFKTSDYAGMIEQVRPRCPALRQVVLL 166
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
S ++ D LP + + + I +TSGTTG PKG +SH
Sbjct: 167 DSPQWTELHSSD--------------LPEWPELSADDPINIQYTSGTTGFPKGATLSHHN 212
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSALE 253
++ ++GY DD PL H GL +A GAC V P F+ + L+
Sbjct: 213 ILNNGYFVGELLGYTVDDRICLPVPLYHCFGLVMGNLAATTHGACVVLPAPAFDPAATLK 272
Query: 254 AVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNS 310
AV TSL VP + +A+LA ++ D S++ + G P E+MK+
Sbjct: 273 AVADERCTSLYGVPTMFIAELA-----DPSFDSHDLSSLRTGIMAGSPCPVEVMKQVVER 327
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS ++ T D L+ + VG+ P
Sbjct: 328 MGMREVSICYGMTETSP-VSTQTRRDDALDR-------------------RVATVGRVGP 367
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+KV G + TRG VML YW+Q W+ TGD+ +D
Sbjct: 368 HLEVKVVDPEHGRTVPRGTPGELCTRGYSVMLGYWEQPDKTAEAIDPARWMHTGDLAVMD 427
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V + GR + GGENVYP E+E L HP ++ V+G+ +A+ E ++A +RL
Sbjct: 428 DDGYVSITGRIKDMVIRGGENVYPREIEEFLHTHPDVLDAQVIGVPDAKYGEELMAWLRL 487
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R L++E +R+ C L +K PR +V FP+T TGK+
Sbjct: 488 RPG---------------AAPLTAEAVREFC-AGELAHYKIPR-YVHVVAEFPMTVTGKV 530
Query: 545 RRDEVRREVMSHLKS 559
R+ E+RR+ + L S
Sbjct: 531 RKVEMRRQAAAILGS 545
>gi|433658071|ref|YP_007275450.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
gi|432508759|gb|AGB10276.1| Long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus BB22OP]
Length = 513
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 257/569 (45%), Gaps = 84/569 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K N I G++ T +F +A +++ G++ GD VA+S N
Sbjct: 3 NLAAALQRNAASKPNKTALICGDKKFTYAEFDAIAGKIATSMIKAGVKPGDRVALSCPNL 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT--- 124
++ AV G + PLN +E + ++S +Y + T
Sbjct: 63 PFFPFVYFAVQKAGAVTVPLNVLLKSREIKYHL----------EDSKAKFYFCFEGTPEL 112
Query: 125 --AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP---------EGA 173
A ++ + + + V +D + +L S F P +
Sbjct: 113 PMAKEGMKAFKEVDACETMIVMTQDQTQKEYQGLPTLTS--FIEDIEPLADYVARDADDT 170
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 232
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 171 CVILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNA 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++ +
Sbjct: 231 SVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVV 286
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 287 VSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG--------- 334
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 407
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 -----------SVGQPIQGVEVKVVDLDGHALAVGEEGEIIVRGHNVMKGYLD----RPE 379
Query: 408 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 380 VTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMV 439
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 440 AVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFK 482
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR FV R+ P+++TGKI + E++ E+
Sbjct: 483 YPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|408383162|ref|ZP_11180700.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
gi|407814080|gb|EKF84717.1| AMP-binding domain protein [Methanobacterium formicicum DSM 3637]
Length = 553
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 157/575 (27%), Positives = 249/575 (43%), Gaps = 66/575 (11%)
Query: 4 YSQAHICQCLSRIAAVKRNSVVTITGNR--HNTGQQFVQDVLNLARGLLEIGLRSGDIVA 61
+S+ I L + N + +R T Q+F + V LA+G LEIG++ GD V
Sbjct: 3 FSELTIGDFLEEMVKKDPNQEFMVYPDRDLRFTYQEFDERVNLLAKGFLEIGIKKGDHVG 62
Query: 62 ISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLE 120
I A N +L + A + IG ++ +N + E + + S + + D D Y++
Sbjct: 63 IWAKNVPDWLTMLFATSKIGAVLVTVNTAYKSHELAYVLEQSDMKALAIIDGYQDVDYIQ 122
Query: 121 LQHTAIPSLRWHV--SLGSSSSDFVNK---------RDMLTAD--ILKGYSLRSLPFTH- 166
+ + IP L+ L S F++ R M + +L G F
Sbjct: 123 IVYELIPELKTQERGKLNSEKFPFLDSVIYVGQEKHRGMYNTNELLLLGNHADDEEFQRI 182
Query: 167 --SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
S + V + +TSGTTG PKGV+++H ++ + E D T PL H
Sbjct: 183 KSSVTNDEVVNMQYTSGTTGFPKGVMLTHRNILNNGYYIGERQKFTEKDRLCITVPLFHC 242
Query: 225 GGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
G+ A MA GA V + F+ L AV++ T+L VP + +A
Sbjct: 243 FGIVLAVMATFSHGATMVMVELFDPLLVLAAVQKERCTALYGVPTMF--IAEYSHPMFDM 300
Query: 284 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 343
S++ + G P E MK N ++ S YG+TE S T ++ DP
Sbjct: 301 FDLSSLRTGIMAGSTPPIEAMKRVVNDMNMTQITSVYGLTEGSPGFTQTSVDDPL----- 355
Query: 344 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLR 397
+ + VGKP P E+K+ G G I +G +VM
Sbjct: 356 ---------------EKRVETVGKPLPECEVKIVDPETGETLGPHQTGEICCKGYNVMKG 400
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
Y+ V + WL +GD+ S+D+ G +VGR I GGEN+YP E+E L
Sbjct: 401 YYKMPDKTREVIDEDGWLHSGDLASVDEEGYYSIVGRIKDMIIRGGENIYPREIEEFLYT 460
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
PG++ + VVGI++ + E+V AC+ L E + +E + +R + R
Sbjct: 461 MPGVLDVQVVGISDEKYGEIVGACIILEEDAELTEED----------------VRDYART 504
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K + FK P+ V + FPLT++GKI++ +R +
Sbjct: 505 K-IARFKVPK-HVFFVDEFPLTASGKIQKFILREQ 537
>gi|134099340|ref|YP_001105001.1| feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|133911963|emb|CAM02076.1| putative feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 497
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 241/547 (44%), Gaps = 68/547 (12%)
Query: 14 SRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEW 73
+R A + V + G R +T + LARGL +G+R GD V N YLE
Sbjct: 11 ARRARMTPGRVALVQGERRDTYADLARRTAALARGLRGLGVRRGDRVGYLGPNHPAYLET 70
Query: 74 ILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV 133
+ A A +G + P+N R + E + + +LV ++ + +L + A P LR +
Sbjct: 71 LFASASLGAVFVPVNTRLAAAELAYVLADAGVSVLV--HTAAAGHL-VDAAASPVLRERL 127
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ S + D+ G P + +I +TSG+TG PKG V+SH
Sbjct: 128 VVDEDSYE----------DVAGGTGE---PVAEPVGLDDPCLIMYTSGSTGRPKGAVLSH 174
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSAL 252
L + + +V L APL H L + + L+ G V + FE AL
Sbjct: 175 GNLTWNCVNVLVESDLSGSEVALVAAPLFHTAALGMTCLPTLLKGGTVVLMESFEPAVAL 234
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNS 310
E + +H VT L VP + +A + +W+ D SV+ +L GG +P ++ +
Sbjct: 235 ELIARHRVTLLFGVPTMYDAIAA----QPSWESADLSSVRTLLCGGSPVPDATIRRYLDR 290
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDP----TLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ YGMTETS + + DP T +P F +V SV P G V
Sbjct: 291 --GLVFVQGYGMTETSPGVLIL---DPDAVRTKAGTAGVPSFFTDV---SVVDPSGNPVA 342
Query: 367 KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+ G I+ RG +VML YW+Q A +G W+ +GD+ ++D+
Sbjct: 343 --------------AGERGEIVVRGPNVMLGYWNQPDATDEALSGG-WMHSGDVATVDED 387
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G + +V R I SGGENVYP EVE+ L +HP + VVG+ + + E+ A V LR
Sbjct: 388 GYITIVDRIKDLIISGGENVYPAEVESALYEHPAVELCAVVGVPDPKWGEVPRAAVVLRP 447
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ + D+ LR H R ++L +K P+ W P T GKIR+
Sbjct: 448 G---AGATADE-------------LRDHLR-RHLAAYKVPKQVDFWDD-LPRTGAGKIRK 489
Query: 547 DEVRREV 553
VR +
Sbjct: 490 QAVRERL 496
>gi|403508875|ref|YP_006640513.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402799440|gb|AFR06850.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 542
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 258/564 (45%), Gaps = 67/564 (11%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW 69
L+R AA R++++ T ++F +V +A GLL++G+ GD V I + N +EW
Sbjct: 28 LARTAAAHPDRDALIDRGLGLRYTYREFDAEVDRVASGLLDLGVAKGDRVGIWSPNRAEW 87
Query: 70 YLEWILAVAFIGGIVAPLN-------YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ 122
L A A IG ++ +N R+ +A ++ P +D + +E
Sbjct: 88 ALVQ-YATARIGAVLVNINPAYRTHELRYVLGQAGVSVLVSAPAFKTSDYAG---MIEEV 143
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
P LR V L S + D +L A G + + +P+ + I +TSGT
Sbjct: 144 RGDCPDLRDVVLLESPAWDA-----LLAAGERNGRGPVA-EVEATLSPDDPINIQYTSGT 197
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHV 241
TG PKG +SH ++ + ++GY E D P H G + +A GAC V
Sbjct: 198 TGFPKGATLSHHNILNNGFSVGELLGYTEIDRIALPVPFYHCFGMVMGNLAATSHGACMV 257
Query: 242 FI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
P FE +AL+AV+ TSL VPA+ +A L +++ + G P
Sbjct: 258 IPGPGFEPATALDAVQAEKCTSLYGVPAMF--IAELALPDFDDYDLSTLRTGIMAGSPCP 315
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
E+M++ + A++ YGMTETS ++ T D +LE
Sbjct: 316 VEVMRQVIDRMGMAEVSICYGMTETSP-VSTQTRRDDSLER------------------- 355
Query: 361 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+ VG+ PH+E+KV + G + TRG VML YW++ V W
Sbjct: 356 RVSTVGRVGPHLEVKVIDPATGVTVPRGTPGELCTRGYSVMLGYWNEPDKTAEVIDRGRW 415
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+ +D+ G V + GR + GGEN+YP E+E VL HP ++ V+G+ + +
Sbjct: 416 MHTGDLAVMDEDGYVGITGRIKDMVIRGGENIYPREIEEVLYTHPDLLDAQVIGVPDQKY 475
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E ++A VR+RE + L+ E LR C+ + + FK PR +V
Sbjct: 476 GEELMAWVRMREGAE---------------PLTPETLRAFCQGR-IAHFKIPR-YVHVVD 518
Query: 535 PFPLTSTGKIRRDEVRREVMSHLK 558
FP+T TGK+R+ ++R E + L
Sbjct: 519 EFPMTVTGKVRKVQMREESLRLLD 542
>gi|404213877|ref|YP_006668071.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403644676|gb|AFR47916.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 547
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 242/556 (43%), Gaps = 62/556 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R +++ R +F +DV +A GLL +G+ GD V + + N EW+L A
Sbjct: 38 DRTALIDAAARREWRYSEFHRDVRAVAAGLLRLGVSVGDRVGLWSPNR---FEWVLTQYA 94
Query: 77 VAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWH 132
A IG ++ LN + E A+ S V+L D DS Y + A P LR
Sbjct: 95 AAEIGAVLVNLNPAYRQNEIEYALQQSGTSVVLAADSFKDSAYASMLAQARPRCPELREV 154
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V GS ++ D L + R S +P+ + I +TSGTTG PKG +S
Sbjct: 155 VLFGS------DEWDALCVEASAEELERVSEVAASLSPDDPINIQYTSGTTGFPKGATLS 208
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKS 250
H + ++ Y DD P H G + +A GA V P F+ ++
Sbjct: 209 HRNIGNNGYLVGELLNYTADDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPRA 268
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
LEAV ++ TSL VP + + S++ + G P +M++ +
Sbjct: 269 TLEAVAEYRCTSLYGVPTMFI-AELGLLDDGLDVDLSSLRTGIMAGSPCPEYVMRQVVDR 327
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS T + DP + + VG+ P
Sbjct: 328 MHMREVSICYGMTETSPVSTQTRVDDPL--------------------ELRVTTVGRVGP 367
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+K+ G+ G + TRG VM YW++ + W+ TGD+ +D
Sbjct: 368 HLEIKIVDPGTGETSGRGETGELCTRGYSVMTGYWNEPEKTAEAIDADGWMHTGDLADMD 427
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VRL
Sbjct: 428 DNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRL 487
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R+S +++ LR+ K + K PR +V + FP+T TGK+
Sbjct: 488 RDSASG---------------FTADDLREFATGK-IARHKIPR-YVHVVEEFPMTVTGKV 530
Query: 545 RRDEVRREVMSHLKSL 560
R+ +R E +S L+ L
Sbjct: 531 RKVAMRDEAVSILEQL 546
>gi|417319509|ref|ZP_12106067.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
gi|328474699|gb|EGF45504.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
10329]
Length = 513
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 259/571 (45%), Gaps = 88/571 (15%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVL--NLARGLLEIGLRSGDIVAISAL 65
++ L R AA K N I G+ T +F DV+ +A +++ G++ GD VA+S
Sbjct: 3 NLAAALQRNAASKPNKTALICGDNKFTYAEF--DVIAGKIATSMIKAGVKPGDRVALSCP 60
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT- 124
N ++ AV G + PLN +E + ++S +Y + T
Sbjct: 61 NLPFFPFVYFAVQKAGAVTVPLNVLLKSREIKYHL----------EDSKAKFYFCFEGTP 110
Query: 125 ----AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP---------E 171
A ++ + + + V +D + +L S F P +
Sbjct: 111 ELPMAKEGMKAFKEVDACETMIVMTQDQTQKEYQGLPTLTS--FIEDIEPLADYVARDAD 168
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 231
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + +
Sbjct: 169 DTCVILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHL 228
Query: 232 -AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 290
A + GA V +P+F+ K LE +E+H VT VP + L + V+ + S++
Sbjct: 229 NASVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNYD-ISSLR 284
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 285 VAVSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG------- 334
Query: 351 NVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAK 405
VG+P VE+KV DG + G I+ RG +VM Y D +
Sbjct: 335 -------------SVGQPIQGVEVKVVDLDGHALPVGEEGEIIVRGHNVMKGYLD----R 377
Query: 406 PSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 462
P V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP +
Sbjct: 378 PEVTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVA 437
Query: 463 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
+ V+GI + E + A V L+ + Q+ E++ EL L RE+ L
Sbjct: 438 MVAVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LAN 480
Query: 523 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
FK PR FV R+ P+++TGKI + E++ E+
Sbjct: 481 FKYPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|321466592|gb|EFX77587.1| hypothetical protein DAPPUDRAFT_54086 [Daphnia pulex]
Length = 577
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 163/572 (28%), Positives = 252/572 (44%), Gaps = 83/572 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYL-EWILAVA 78
R +VV I N T QQ + D LA G + + L+ GD + I NS EW L +W A A
Sbjct: 50 REAVVVIHQNIRKTYQQLLNDANQLAAGFVSLKLKRGDRIGIWGPNSYEWALTQWGAARA 109
Query: 79 FIGGIVAPLNYRWSFK--EASRAITSIRPVMLVTDESSDSW-YLELQHTAIPSLRWHVSL 135
G++ +N S++ E A+ + LV ES + Y + + A+P ++
Sbjct: 110 ---GLILVVNINPSYQPLELKYALNKVGIKTLVAAESFKNLDYFSILNEAVPEIK----- 161
Query: 136 GSSSSDFVNKRD--------MLTADILKG----YSLRSLPFTHSWAPEGAVI-------- 175
+ DF+ R+ M++ I KG + + + G +
Sbjct: 162 ETKEMDFIKSREVPTLESVIMISDRIEKGTWRFQDIMQMGGNNELKEIGGIQSKIQFDEP 221
Query: 176 --ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL-HTAPLCH-IGGLSSAM 231
I FTSGTTGSPKG ++H ++ GY L PL H G + +
Sbjct: 222 ANIQFTSGTTGSPKGATLTHHNIVNNGYLMGLRTGYHLKAHRLCLPVPLYHCFGCVMGVL 281
Query: 232 AMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 290
+ + G +V P F ++ A++AVEQ TSL P + D+ L +K S+
Sbjct: 282 SAVSHGGSYVLSSPAFSARKAVKAVEQERCTSLYGTPTMFVDILNLPDLKSY--DLSSLS 339
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
G P ++K + + AYGMTETS +TF LE
Sbjct: 340 TGYMAGAPCPQSIVKAVVHDLHMKDFVVAYGMTETSP-VTFSGYSSDPLEV--------- 389
Query: 351 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 405
+ +G P+ + E+KV ++ V G + TRG ML+YW+
Sbjct: 390 ----------RHSTIGFPSDYTEVKVVNEDGHIVPINTPGELYTRGYSNMLKYWNDDEKT 439
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ + + WL TGDI ID+ G +VGR + GGEN+YP E+E +L HP + +
Sbjct: 440 KEMISVDRWLRTGDIAVIDENGYGQIVGRAKDMLIRGGENIYPREIEELLHTHPAVAEVH 499
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V+G+ + RL E V A +RLR +E + LR CR+K + FK
Sbjct: 500 VIGVPDVRLGEEVCAWIRLRPGCVATEDD----------------LRNFCRDK-VAYFKV 542
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
P+ ++L+R FP T TGKI++ +R ++ L
Sbjct: 543 PK-YILFRDDFPKTVTGKIQKFRMREITVAEL 573
>gi|372269916|ref|ZP_09505964.1| AMP-binding domain protein [Marinobacterium stanieri S30]
Length = 562
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 259/564 (45%), Gaps = 70/564 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFI 80
++++ + + H + ++ Q V AR L+ +G+R GD V + + N SEW + A A I
Sbjct: 37 DALIVLHQDIHWSYRELQQQVNQCARALMALGVRKGDRVGVWSPNCSEWTVSQ-FATAKI 95
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS-------WYL----------ELQH 123
G I+ +N + E A+ L+T +S S + L +L+
Sbjct: 96 GAILVNINPAYRTHELEYALNQSGARFLITADSFKSSDYRGMLYELAPELKASAEGKLKS 155
Query: 124 TAIPSLRWHVSLGSSSSDFVNK-RDML-TADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+P L ++L S + + DM+ A+ L L T + + A+ I +TSG
Sbjct: 156 QKLPELECVINLSSEKHAGMWRWADMMEQAEQTPEKDLADLQATLQF--DEAINIQYTSG 213
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACH 240
TTG PKG +SH ++ +G+ +D + PL H G + + + GA
Sbjct: 214 TTGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMGNLGCVTHGATM 273
Query: 241 VFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
++ + FE S L+AV T+L VP + +A L + +++ + G
Sbjct: 274 IYPDEGFEPTSVLKAVHSQKATALYGVPTMF--IAELDHPEFESFDLSTLRTGIMAGSIC 331
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P+E+MK+ N +++ AYGMTETS T N +
Sbjct: 332 PTEVMKQVINKMNMSEVQIAYGMTETSPVST--------------------QTGANDSIE 371
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ VG+ PH+E KV G+ + G + TRG VML+YW+ A
Sbjct: 372 KRVSTVGRTQPHLESKVVDPGTGQIVPRGEIGELCTRGYSVMLKYWNNEHATADAIDEAG 431
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ ++DD G + +VGR + GGENVYP+E+E L HP + + V G+ + +
Sbjct: 432 WMHTGDLATMDDEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYTHPAVSEVQVTGVPDKK 491
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E ++A ++L + +S+E LR+ C+ K +T FK PR F +
Sbjct: 492 YGEELIAWIKLHGDAEE---------------VSAEDLREFCKGK-ITHFKIPRYFKFVQ 535
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
+ FP+T TGKI++ ++R ++ L
Sbjct: 536 E-FPMTVTGKIQKFKMREISIAEL 558
>gi|269967038|ref|ZP_06181106.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
40B]
gi|269828297|gb|EEZ82563.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
40B]
Length = 538
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 254/568 (44%), Gaps = 82/568 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K + I G QF +A L+ G++ GD VAIS N
Sbjct: 28 NLAAALQRNAASKPDKTALICGAEKINYAQFDAIAGKIAASLINKGVKPGDRVAISCPNI 87
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
++ A+ G + PLN + R + ++S +Y + T +
Sbjct: 88 PFFAFVYYAIQKAGAVAVPLN----------VLLKAREIKYHLEDSKAKFYFCFEGTKEL 137
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGY------------SLRSLPFTHSWAPEGAV 174
P + V D +LT + Y ++ LP +
Sbjct: 138 PMAKEGVK-AFEQVDTCEGIVVLTQSQDQSYWNGVITLNAFIADVQPLPDYIPRNADDTC 196
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 233
+I +TSGTTG PKG ++ +I+ +L I+G DD++L T PL H G + + A
Sbjct: 197 VILYTSGTTGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNAS 256
Query: 234 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
++ GA V +P+FE K LE VE+H VT VP + L + V+ + S++ +
Sbjct: 257 VLGGATLVLVPRFEPKHVLELVEKHRVTIFAGVPTMYIGL---LHVQHQFD-TSSLRVAV 312
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
+GG LP+E+ + +F ++ YG++ETS F L + PG
Sbjct: 313 SGGAPLPTEIFRTFEETF-NVPILEGYGLSETSPIACFNHLDQERI--PG---------- 359
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSV 408
VG+P VE+KV +G++ G I+ RG +VM Y D +P V
Sbjct: 360 ----------SVGQPVQGVEVKVIDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPEV 405
Query: 409 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ + W TGD+G D GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 406 TESALQNGWFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVSMVA 465
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V+GI N E + A V L K KE + ++ L++ +E+ L FK
Sbjct: 466 VIGIPNEEYGEEIKAYVVL---------------KPKE-YIDADSLQKWGKEQ-LASFKY 508
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR +V R+ P+++TGKI + E++ E+
Sbjct: 509 PR-YVEIREHLPMSATGKILKRELKSEL 535
>gi|326384443|ref|ZP_08206123.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326196788|gb|EGD53982.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 505
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 239/523 (45%), Gaps = 73/523 (13%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
+A LL GL GD VA+ N ++ + G + PLN ++ +E + +
Sbjct: 40 RVAAALLARGLVPGDKVAVQLPNVPEFVFAYFGILRAGLTMVPLNPLFTAREMTYHLDDS 99
Query: 104 RPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 163
ML+T S + + A + V LG V + D L L + P
Sbjct: 100 DSRMLLTSTFSLTGAVPGAAAAGVADVLVVPLGQELPADVGRFDEL---------LEAEP 150
Query: 164 F--THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 221
F H +P+ ++ +TSGTTG PKG ++H L + + G DDV + PL
Sbjct: 151 FGDLHPASPDDTAVLLYTSGTTGRPKGAELTHFQLYMNCTVAPELFGLRADDVAIGVLPL 210
Query: 222 CHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
H+ GLSS + A + G +P+F++++AL+ +E+ VT VP + LA +
Sbjct: 211 FHVFGLSSVLNAAVRWGGSVALLPRFDAQAALDVIERRRVTVFSGVPTMYVALA-----E 265
Query: 281 KTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 338
GRD S++ ++GG +P E+++ FP ++ YG++ET+S+ TF
Sbjct: 266 ADTSGRDLSSLRTAISGGASIPGEVIRAVEAKFPGVVVLEGYGLSETASTSTF------- 318
Query: 339 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-------SDGSSHVGRILTRG 391
N+ S + + + +GKP VE+ V + G VG+++ RG
Sbjct: 319 ------------NI---SATERKVLSIGKPVWGVEMAVLDGDGTPMAAGPDQVGQLVVRG 363
Query: 392 AHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
+VM Y+ +P + + WL TGD+G D+ G ++V R I GG NVYP
Sbjct: 364 HNVMKGYYK----RPDATAEALRNGWLHTGDLGYRDEDGYYFVVDRLKDLIVRGGYNVYP 419
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E+E VL HP ++ V+G+ + RL E VVA V LR + S EL+ S
Sbjct: 420 REIEEVLYTHPEVVEAAVIGVPDDRLGEEVVAYVALR---------AEASVTPDELIAFS 470
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
++ L +K PR V P +TGKI + E+RR
Sbjct: 471 --------KEQLAAYKYPRA-VEIVDALPKGATGKILKRELRR 504
>gi|260903505|ref|ZP_05911900.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AQ4037]
gi|308106743|gb|EFO44283.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AQ4037]
Length = 513
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 256/569 (44%), Gaps = 84/569 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K N I G++ T +F +A +++ G++ GD VA+S N
Sbjct: 3 NLAAALQRNAASKPNKTALICGDKKFTYAEFDAIAGKIATSMIKAGVKPGDRVALSCPNL 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT--- 124
++ AV G + PLN +E + ++S +Y + T
Sbjct: 63 PFFPFVYFAVQKAGAVTVPLNVLLKSREIKYHL----------EDSKAKFYFCFEGTPEL 112
Query: 125 --AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP---------EGA 173
A ++ + + + V +D + +L S F P +
Sbjct: 113 PMAKEGMKAFKEVDACETMIVMTQDQTQKEYQGLPTLTS--FIEDIEPLADYVARDADDT 170
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 232
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 171 CVILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNA 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++
Sbjct: 231 SVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVA 286
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 287 VSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG--------- 334
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 407
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 -----------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RPE 379
Query: 408 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 380 VTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMV 439
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 440 AVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFK 482
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR FV R+ P+++TGKI + E++ E+
Sbjct: 483 YPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|421749451|ref|ZP_16186888.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
gi|409771687|gb|EKN53910.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator HPC(L)]
Length = 563
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 257/556 (46%), Gaps = 74/556 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +QF + V LA GLL G+ GD V I + N + +L A A IG I+ +N +
Sbjct: 52 TWRQFSEQVDRLATGLLARGIARGDRVGIWSPNRQEWLVTQFATARIGAILVNINPAYRL 111
Query: 94 KEASRAITSIRPVMLVT-----------------DESSDSWYLELQHTAIPSLRWHVSLG 136
E A+ ML+T E +DS L+ +P+L+W V +G
Sbjct: 112 AELEYALNKAGVRMLITAARFKTSNYIEMLQKLAPELADSQPGTLRAARLPALQWVVRMG 171
Query: 137 S-SSSDFVNKRDMLTA-DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
++ V ++L+A DI + ++ S + AP + I FTSGTTG+PKG ++H
Sbjct: 172 EEDTAGMVRYAEVLSAPDIARLDAIGS-----ALAPHDPINIQFTSGTTGNPKGATLTHH 226
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSAL 252
++ + E D PL H G+ S +A + VGA +F + F+ + +
Sbjct: 227 NVVNNGRYVAMAMRLTERDSLCIPVPLYHCFGMVLSVLACVSVGARMIFPGEAFDPLATM 286
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+AV + T+L VP + +A L T S++ + G P E+MK
Sbjct: 287 QAVHEERCTALHGVPTMF--IAQLDHPDFTKFDFTSLRTGIMAGAPCPIEVMKRVVKDMH 344
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
A++ AYGMTETS ++F + D LE + VG+ PH+
Sbjct: 345 MAEVTIAYGMTETSP-VSFQSATDDPLEK-------------------RVATVGRVQPHL 384
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+ K+ + V G + TRG VML YW D + ++ G W+ TGD+ +ID+
Sbjct: 385 QCKIVDETGQVVPVGATGELCTRGYSVMLGYWEDDARTREAIRDG--WMHTGDLATIDEQ 442
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGEN+YP E+E L +HP + + V G+ + + E + A + L+
Sbjct: 443 GYCNIVGRVKDMVIRGGENLYPREIEEFLFRHPKVQAVQVFGVPDPKYGEELCAWIVLKP 502
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
QS+ E +R+ CR++ + +K PR +V + P+T TGK+++
Sbjct: 503 G---------QSATEDE-------IREFCRDQ-IAHYKIPR-YVRFVDDMPMTVTGKVQK 544
Query: 547 DEVRREVMSHLKSLPS 562
+R ++ L P+
Sbjct: 545 FVMRETMIRELGLEPA 560
>gi|407694368|ref|YP_006819156.1| long-chain-fatty-acid-CoA ligase [Alcanivorax dieselolei B5]
gi|407251706|gb|AFT68813.1| Long-chain-fatty-acid-CoA ligase, putative [Alcanivorax dieselolei
B5]
Length = 560
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 244/547 (44%), Gaps = 80/547 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
Q ++V AR + +GL+ GD + I A N +EW + A A +G I+ +N +
Sbjct: 48 NQLAEEVERYARAFMALGLQPGDRLGIWAPNCAEWCITQ-FASAKMGAILVNINPAYRLN 106
Query: 95 EASRAI---------------TSIRPVML--VTDESSDSWYLELQHTAIPSLRWHVSLGS 137
E A+ TS ML + E + S ++ +P LR VSL
Sbjct: 107 ELEYALKQSGCRWLVCADNFKTSDYQSMLTELVPELASSRPGDVHSEVLPELRGVVSLAD 166
Query: 138 SS-SDFVNKRDM------LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
+ F++ R++ + D LK P+ + I +TSGTTG PKG
Sbjct: 167 QPPAGFMSWRELGALSESVAVDDLKQRQA-------GLKPDDPINIQYTSGTTGFPKGAT 219
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFES 248
+SH ++ +G+ E D + PL H G + + + G+ ++ P F+
Sbjct: 220 LSHRNILNNGYMVAESMGFTERDRLVIPVPLYHCFGMVMGNLGCMTHGSTMIYPAPGFDP 279
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
++ LEAV T+L VP + R+K+ S++ + G P E+M+
Sbjct: 280 EATLEAVASERATALYGVPTMFIAELGHPRIKEF--DLSSLRTGIMAGATCPIEVMRRVI 337
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+ ++ AYGMTETS ++ T D LE + VG+
Sbjct: 338 SEMHMEEVQIAYGMTETSP-VSLQTGADDELER-------------------RVSTVGRT 377
Query: 369 APHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E KV + + +G + TRG VML YW+ A + W+ TGD+ +
Sbjct: 378 QPHLETKVVDEQGNTVPRGEIGELCTRGYSVMLGYWNNPDATAGAIDDDGWMHTGDLAVM 437
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G V +VGR I GGEN+YP E+E L HP ++ + V+GI + + E +VA V+
Sbjct: 438 DDAGYVRIVGRSKDMIIRGGENIYPREIEEFLYTHPAVVDVQVIGIPDDKYGEEIVAWVK 497
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+ Q +EVLR +C+ + + FK PR F + FP+T TGK
Sbjct: 498 LKSGEQ----------------ADAEVLRDYCKNR-IAHFKTPRHFK-FVDDFPMTVTGK 539
Query: 544 IRRDEVR 550
I++ +R
Sbjct: 540 IQKFRMR 546
>gi|385680892|ref|ZP_10054820.1| AMP-binding domain protein [Amycolatopsis sp. ATCC 39116]
Length = 533
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 164/554 (29%), Positives = 256/554 (46%), Gaps = 72/554 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW-YLEWILAVA 78
R+++V R T ++ +V LA GL G+ GD V I + N +EW +L++ A A
Sbjct: 32 RDALVEYASGRRWTYRELAAEVDALAAGLAGRGIGKGDRVGIWSPNCAEWTFLQY--ATA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSD-SWYLELQHTAIPSLRWHVS 134
IG ++ +N + E + MLV T ++SD + +E +L V
Sbjct: 90 KIGVVLVNINPAYRSHELEFVLNQAGVKMLVAARTFKTSDYAAMIEEVRPRCAALEQVVL 149
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
LGS +++++ ++LP + + + I +TSGTTG PKG +SH
Sbjct: 150 LGSDE----------WSELMESGRGKALPEV-GLSADDPINIQYTSGTTGFPKGATLSHH 198
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSAL 252
++ + Y E D P H G+ +A GAC V P FE K+ L
Sbjct: 199 NILNNGFFVGELCHYTEADRVCIPVPFYHCFGMVMGNLAATTHGACMVIPAPSFEPKATL 258
Query: 253 EAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATN 309
+AVE TSL VP + +A+LA + ++ D S++ + G P E+MK+
Sbjct: 259 QAVEAERCTSLYGVPTMFIAELA-----EPGFEDYDLSSLRTGIMAGSPCPVEVMKQVIE 313
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
A++ YGMTETS T T D ++E + VG+
Sbjct: 314 RMGMAEVSICYGMTETSPVST-QTRSDDSIER-------------------RVSTVGRVG 353
Query: 370 PHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+K+ + G + TRG VML YWDQ V W+ TGD+G +
Sbjct: 354 PHLEVKIVDPETGLTVPRGEPGELCTRGYSVMLGYWDQPDKTAEVIDKARWMHTGDLGVM 413
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G + + GR + GGEN+YP E+E L HP ++ V+G+ + R E ++A +R
Sbjct: 414 DDEGYIQITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIGVPDQRYGEELMAWIR 473
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
+RE Q L++E LR+ C K L +K P+ +V FP+T TGK
Sbjct: 474 MREGAQ---------------PLTAESLREFCTGK-LAHYKIPK-YVHIVDEFPMTVTGK 516
Query: 544 IRRDEVRREVMSHL 557
+R+ E+R + + L
Sbjct: 517 VRKVEMREKALKIL 530
>gi|384159161|ref|YP_005541234.1| AMP-binding protein [Bacillus amyloliquefaciens TA208]
gi|384164411|ref|YP_005545790.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|384168205|ref|YP_005549583.1| AMP-binding protein [Bacillus amyloliquefaciens XH7]
gi|328553249|gb|AEB23741.1| AMP-binding domain protein [Bacillus amyloliquefaciens TA208]
gi|328911966|gb|AEB63562.1| AMP-binding domain protein,fatty-acyl-CoA synthase [Bacillus
amyloliquefaciens LL3]
gi|341827484|gb|AEK88735.1| AMP-binding domain protein [Bacillus amyloliquefaciens XH7]
Length = 546
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/550 (27%), Positives = 245/550 (44%), Gaps = 66/550 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +F + A+GL+++G+ GD VAI A N +L A A IG ++ +N +
Sbjct: 36 TYAEFDRLCRQTAKGLMKLGIEKGDHVAIWASNIPEWLAAQFATAKIGAVLITINTNFQI 95
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWH----------------VSLG 136
E +T S +++ D + Y+EL + IP L+ + +G
Sbjct: 96 AELDYLLTHSDVSALIIMDSYRQTSYVELVNKLIPELKTCERGRLRSKRYPFLQTVLYIG 155
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
S ++ D L D S + + + +TSGTTG PKGV++SH
Sbjct: 156 DQSPPGMHHWDALLKDAETVTDAELDRRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFN- 214
Query: 197 IVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEA 254
IV + A IA + D P H G + +A + GA + I +F S L+
Sbjct: 215 IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVSAGAAMIPIEQFSPPSVLKT 274
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
VEQ T+L VP + +A L + V+ + G P+E+M+E
Sbjct: 275 VEQEACTALHGVPTMF--IALLHDSGFSDYDLSHVRTGIMAGSPCPAEVMREVIGKMGMT 332
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+ AYG TE S +T DP + + G+ PH+E+
Sbjct: 333 DITIAYGQTEASPVITQTRTDDP--------------------FERRVETAGRALPHIEV 372
Query: 375 KVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
++ G+S G + TRG HVM Y+ A + WL TGD+ +D+ G
Sbjct: 373 RIVRPGTSEEAARGEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTGDLAVMDEDGY 432
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+ GR + GGEN+YP E+E +L +HP + + VVG+ + + E A +RL++
Sbjct: 433 CKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEAAAWIRLKDG- 491
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
Q++ S+E +R C+E N+ +K PR +VL+ +P+T++GKI++ +
Sbjct: 492 --------QTA-------SAEDIRTFCKE-NIARYKVPR-YVLFTDEYPMTASGKIQKFK 534
Query: 549 VRREVMSHLK 558
+R + + LK
Sbjct: 535 LREKTIEELK 544
>gi|441160730|ref|ZP_20967802.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440616867|gb|ELQ79989.1| AMP-binding domain protein [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 584
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 242/559 (43%), Gaps = 73/559 (13%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A + + +SR R ++V + G R T + + V +A GLL G+R GD V I A N
Sbjct: 42 ADLERAISRFG--DREALVDVAGGRRWTYAELGRAVDEVALGLLAKGVRKGDRVGIWAPN 99
Query: 67 SEWYLEWIL---AVAFIGGIVAPLN--YR-----WSFKEASRAITSIRPVMLVTDESSD- 115
EW+L A A IG I+ +N YR + K+A ++ V V +SSD
Sbjct: 100 CP---EWVLVQYATARIGAIMVNINPAYRVHELAYVLKQAGMSVL----VSAVAHKSSDY 152
Query: 116 SWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+E +LR + + + D +L A Y R +P V
Sbjct: 153 RRMIEQVRAESRALRDVIYIDDPTWD-----GLLAAGATVPYE-RLAACAKELSPHDPVN 206
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 234
I +TSGTTG PKG +SH ++ VGY E D P H G+ +
Sbjct: 207 IQYTSGTTGFPKGATLSHHNILNNGFWVGETVGYTEHDRVCLPVPFYHCFGMVMGNLGAT 266
Query: 235 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
GAC V P F++ + L AVEQ TSL VP + +A L S++ +
Sbjct: 267 SHGACIVIPAPAFDAAATLRAVEQERCTSLYGVPTMF--IAELDHPDFATFDLSSLRTGI 324
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+M+ + A++ YGMTETS T D G
Sbjct: 325 MAGSPCPEEVMRRVVSEMHMAEVSICYGMTETSPVSTQTRRDDDLAHRTGT--------- 375
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 407
VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 376 -----------VGRVLPHIEVKVVDPATGATVPRGEPGELCTRGYSVMLGYWEEPERTDE 424
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
E W+ TGD+ ++D G + +VGR I GGENVYP E+E L HP I + VV
Sbjct: 425 AIDAERWMHTGDLAVMNDDGYLRIVGRIKDMIIRGGENVYPREIEEFLYTHPKIADVQVV 484
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ +A+ E + ACV LR+ L+ + L + CR + L +K PR
Sbjct: 485 GVPDAKYGEEIAACVILRDPAAG---------------LTRDELARFCRSR-LAHYKVPR 528
Query: 528 LFVLWRKPFPLTSTGKIRR 546
+V FP+T +GK+R+
Sbjct: 529 -YVHVLDAFPMTVSGKVRK 546
>gi|73537400|ref|YP_297767.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha JMP134]
gi|72120737|gb|AAZ62923.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 526
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 243/557 (43%), Gaps = 62/557 (11%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A + + A ++ ++V R + +F ++ +A+ LL G+R+GD + N
Sbjct: 7 ATLPHAVRHFAGLRPDAVAYAFEGRQTSYAEFERNTSRVAQALLAAGVRAGDRIGYIGKN 66
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
+ Y E L A +G ++ P ++R + E I VML S + L A+
Sbjct: 67 CDHYFEAWLGAAKMGAVMTPASWRLAGPEVEFIIGHCDAVMLFVGPESTAMVQGLL-PAL 125
Query: 127 PSLRWHVSLGSSSSD----FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
P +R +++ + S + + RD A +LP H V+ +TSGT
Sbjct: 126 PMVRQVIAMEAGGSQDWPVYTDWRDAHPA---------TLP-DHQPDAHDVVLQLYTSGT 175
Query: 183 TGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGA 238
TG PKG +++H L V I + DD+ L P+ HIGG + L+ GA
Sbjct: 176 TGRPKGAMLTHRNLTIGTEVSERESIPWSHWTADDISLVAMPVAHIGGSGWGLRNLLSGA 235
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
V +F+ ++ L+ +E ++ L VPA M + R + R +K +L G
Sbjct: 236 KGVVAREFDPRAVLDFIEYERISKLFMVPAAMQIVLRDPRARSVDYSR--LKYLLYGAAP 293
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+P+ L++E F + YGMTET+ ++ + D T E
Sbjct: 294 IPAALLREGIEVF-GCGFVQQYGMTETTGTVVALPPEDHTTE-----------------E 335
Query: 359 QPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
P+ GKP P VELKV VG ++ R AH M YW Q +
Sbjct: 336 VPRMRAAGKPLPGVELKVVDYEGRELAPGEVGEVVVRSAHNMSGYWKQPEETARTIDADG 395
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL TGD G +D G +++ R I SGGENVYP EVE+ + HP + + V+G+ + +
Sbjct: 396 WLRTGDAGYLDAEGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPIVADVAVIGVPDEK 455
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A V L+ Q++ + ++ + + L GFK P+ + +
Sbjct: 456 WGEAVKAIVVLK---------AGQAADRESIVAWT--------RQRLAGFKVPK-SIDFV 497
Query: 534 KPFPLTSTGKIRRDEVR 550
P +GK+ R ++R
Sbjct: 498 DALPRNPSGKLLRRKLR 514
>gi|377568916|ref|ZP_09798091.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377533823|dbj|GAB43256.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 547
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 157/556 (28%), Positives = 243/556 (43%), Gaps = 62/556 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R +++ R +F +DV +A GLL +G+ GD V + + N EW+L A
Sbjct: 38 DRTALIDAAARREWRYSEFHRDVRAVAAGLLRLGVSVGDRVGLWSPNR---FEWVLTQYA 94
Query: 77 VAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWY---LELQHTAIPSLRWH 132
A IG I+ LN + E A+ S V+L + DS Y LE + P LR
Sbjct: 95 AAEIGAILVNLNPAYRQNEIEYALQQSGTGVVLAAESFKDSAYASMLEQARSRCPELREV 154
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V S D L AD R S +P+ + I +TSGTTG PKG +S
Sbjct: 155 VLFDSPGWD------ALCADASADELERVAEIAASLSPDDPINIQYTSGTTGFPKGATLS 208
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKS 250
H + ++ Y DD P H G + +A GA V P F+ ++
Sbjct: 209 HRNIGNNGYLVGELLNYTADDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPRA 268
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+AV ++ TSL VP + + S++ + G P +M++ +
Sbjct: 269 TLDAVAEYRCTSLYGVPTMFI-AELDLLDDGLDIDLSSLRTGIMAGSPCPEYVMRQVVDR 327
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS T + DP + + VG+ P
Sbjct: 328 LHMREVSICYGMTETSPVSTQTRVDDPL--------------------ELRVTTVGRVGP 367
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+K+ G+ G + TRG VM YW++ + W+ TGD+ +D
Sbjct: 368 HLEIKIVDPGTGETSGRGVTGELCTRGYSVMTGYWNEPEKTAEAIDADGWMHTGDLADMD 427
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VRL
Sbjct: 428 DNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRL 487
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R D +++ +++ LR+ K + K PR +V + FP+T TGK+
Sbjct: 488 R----------DTATE-----FTADDLREFATGK-IARHKIPR-YVHVVEEFPMTVTGKV 530
Query: 545 RRDEVRREVMSHLKSL 560
R+ +R E +S L+ L
Sbjct: 531 RKVAMRDEAVSILEQL 546
>gi|170691767|ref|ZP_02882931.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170143051|gb|EDT11215.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 533
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 236/537 (43%), Gaps = 66/537 (12%)
Query: 42 VLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT 101
V LA+ L ++G+R D VAI S+ LA +G I P+NYR S +A+ I
Sbjct: 37 VRGLAQALFDLGVRQTDRVAIFQKTSDATATAYLACQLLGAIAVPMNYRMSANDAAFIIR 96
Query: 102 SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL---GSSSSDFVNKRDMLT-----ADI 153
L+ D+S + +++ +P LR +V + G + D + +
Sbjct: 97 DAGARALIYDDSMQAVVAKVEQ-GLPDLRIYVRVTGHGGHGDELPGDGDAPSHHHDFDSL 155
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ G R P PE + +TSGTTG PKG + +H + + + D
Sbjct: 156 IDGTRHRDAPLP-PVTPEDISALVYTSGTTGRPKGAIHTHGNDVAIATNCVMEYSLTSTD 214
Query: 214 VYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMAD 272
LH APL H+GG+ + M LMVGA ++ +P+++ + L A+ +H +T+L VP + D
Sbjct: 215 SALHIAPLYHVGGMQAYFMPHLMVGAANIVLPRYDPERTLAAIGEHRITTLFAVPTQIQD 274
Query: 273 LATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
+ L S++ I GG +P+ M+ + F + + YGMTE +SLT +
Sbjct: 275 M--LFHPSFARTDHSSLRMITTGGAAIPAAAMQRVIDEF-CPNVYNGYGMTE--ASLTLL 329
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS---------- 382
+ P G C GKP +V ++ +
Sbjct: 330 -------------------LHPRDALSRLGSC-GKPTLISTCRVVTNDTERVVPSTESVA 369
Query: 383 --HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 440
VG+++ RG + YW+ + + + + WL TGD+ S+D GG GR + I
Sbjct: 370 PGEVGQLIVRGPQLARAYWNNPV-ETAKKFRDGWLYTGDLFSVDAGGYFHFHGRADDMIV 428
Query: 441 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 500
SGGEN+YP EVE VL PG+ V+G+ + + + V A V +R Q +E K
Sbjct: 429 SGGENIYPREVEEVLYHCPGVQEAAVIGVPDPKWGQAVTAFV-VRSDAQLTEDAVIAFCK 487
Query: 501 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ +L +K P+ +L+ PL +GK+ R E+ V L
Sbjct: 488 ASD---------------DLAPYKRPKK-ILFVDRLPLNPSGKVLRRELAASVAEEL 528
>gi|339327543|ref|YP_004687236.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
gi|338167700|gb|AEI78755.1| long-chain-fatty-acid-CoA ligase [Cupriavidus necator N-1]
Length = 557
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 156/545 (28%), Positives = 249/545 (45%), Gaps = 71/545 (13%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
+F V LA GLL+ G++ GD V I A N +L A A IG I+ +N + E
Sbjct: 55 EFSDQVDRLASGLLQRGIQPGDRVGIWAPNRPEWLVTQFATARIGAILVNINPAYRQAEL 114
Query: 97 SRAITSIRPVMLVTDE--SSDSWYLELQHTA---------------IPSLRWHVSLGSSS 139
A+ ML+T S + LQ A +P L+W V +GS +
Sbjct: 115 EYALNKAGVRMLITAARFKSSDYLATLQALAPELAEAEPGALRAARLPRLQWVVRMGSEA 174
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ 199
+ + D L A+ + R T + + A+ I FTSGTTG+PKG ++H ++
Sbjct: 175 TPGMLNYDALLAE---PDTARLDAVTATLSAHDAINIQFTSGTTGNPKGATLTHHNVVNN 231
Query: 200 SLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQ 257
+ G+ DV PL H G+ S +A + VGAC VF + F+ + ++A +
Sbjct: 232 GRFVAMAMCLGDSDVLCIPVPLYHCFGMVLSVLACVSVGACMVFPGEAFDPLATMQAASE 291
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
T+L VP + +A L + + +++ + G P E+MK +++
Sbjct: 292 ERCTALHGVPTMF--IAQLDHPEFSRFDFSTLRTGIMAGAPCPIEVMKRVVADMHMSEVT 349
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYGMTETS P +F + T + + + + VG+ PH+E KV
Sbjct: 350 IAYGMTETS-------------------PVSFQSATDDPLDK-RVATVGRVQPHLECKVV 389
Query: 378 SD-----GSSHVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ G + TRG VM YW D + ++ G W+ TGD+ +IDD G +
Sbjct: 390 DALGEVVPTGATGELCTRGYSVMQGYWEDDERTREAIRDG--WMHTGDLATIDDKGYCNI 447
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
VGR + GGEN+YP E+E L +HP + + V G+ + + E V A + L+
Sbjct: 448 VGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPG---- 503
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
QS+ E +R CR++ + +K PR ++ + P+T TGK+++ V R
Sbjct: 504 -----QSATEDE-------IRTFCRDQ-IAHYKIPR-YIRFVSEMPMTVTGKVQK-FVMR 548
Query: 552 EVMSH 556
+ M H
Sbjct: 549 DTMIH 553
>gi|326775763|ref|ZP_08235028.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
gi|326656096|gb|EGE40942.1| Long-chain-fatty-acid--CoA ligase [Streptomyces griseus XylebKG-1]
Length = 535
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 248/563 (44%), Gaps = 73/563 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R AA R ++V + R T +FV DV LAR L+ G+ GD V I A+N
Sbjct: 20 IGRNLDRTAAEHGDREALVDVASGRRWTYAEFVADVDVLARALMAAGVAKGDRVGIWAVN 79
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYL- 119
EW+L A A IG ++ +N + E + +LV + +SD L
Sbjct: 80 CP---EWVLVQYATARIGAVMVTINPAYRAHEVEFVLRQAGVSLLVASLSHRTSDYRALV 136
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
E + P LR +G S D LTA + + + + I +T
Sbjct: 137 EQVRSDCPDLRAVHYIGDPSWD------ELTAGAPAVGQEQLAAREAELSCDDPINIQYT 190
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 238
SGTTG PKG +SH ++ + Y E D P H G+ +A GA
Sbjct: 191 SGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLACTSHGA 250
Query: 239 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNG 295
C V P FE + L AV+Q TSL VP + L + G D S++ +
Sbjct: 251 CIVIPGPSFEPGAVLTAVQQERCTSLYGVPTMFIAELNL----PDFAGYDLSSLRTGIMA 306
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 307 GSPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER-------------- 351
Query: 356 SVHQPQGVCVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 -----RTGTVGRALPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRTAD 404
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP + + VV
Sbjct: 405 VVDAGRWMHTGDLAVMREDGYVQVVGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQVV 464
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + R E ++ACV R+ D + ++ + +CRE+ L +K PR
Sbjct: 465 GVPDERYGEEILACVIPRDP-------ADPPTLDE--------IFAYCRER-LAHYKIPR 508
Query: 528 LFVLWRKPFPLTSTGKIRRDEVR 550
+ + FP+T +GK+R+ E+R
Sbjct: 509 RLRIL-ETFPMTVSGKVRKVELR 530
>gi|363422556|ref|ZP_09310631.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
gi|359732854|gb|EHK81861.1| AMP-binding domain protein [Rhodococcus pyridinivorans AK37]
Length = 555
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 169/579 (29%), Positives = 254/579 (43%), Gaps = 84/579 (14%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I L R AA R ++V + + +FV D+ LA G+L G+ GD V I A N
Sbjct: 26 IGDNLDRTAARFGDREALVDSAAGKRWSYTEFVADIDVLALGMLRAGITKGDRVGIWAPN 85
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYLE 120
W +W+L A A IG I+ +N + E + MLV T ++SD Y +
Sbjct: 86 C-W--QWVLVQYATAKIGAILVNINPAYRSHELQYVLEQAGVRMLVSAPTFKTSD--YAQ 140
Query: 121 LQHTAIP------------SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 168
+ T P S RW + S + R L A S
Sbjct: 141 MIETVRPNCPDLEDVVLLDSPRWDELVDSGRAALTEDRAPLDA------------AQASL 188
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
+P+ + I +TSGTTG PKG +SH ++ + Y E D PL H G++
Sbjct: 189 SPDDPINIQYTSGTTGFPKGATLSHHNVLNNGFFVGELCHYTERDRVCIPVPLYHCFGMT 248
Query: 229 SA-MAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+A GA V P F+ + L AV + TSL VP + +A L
Sbjct: 249 MGNLACTSHGATIVLPAPGFDPAATLGAVAEEKCTSLYGVPTMF--IAELADPGFDNYDL 306
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
S++ + G P E+MK+ + +++ YGMTETS ++ T D ++E
Sbjct: 307 SSLRTGIMAGSPCPVEVMKQVIDRMGMSEVSICYGMTETSP-VSTQTRSDDSIER----- 360
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWD 400
+ VG+ PH+E+KV + G + TRG VML YWD
Sbjct: 361 --------------RVSTVGRVGPHLEVKVVDPVTGLTVPRGEPGELCTRGYSVMLGYWD 406
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
Q W+ TGDIG +D+ G V + GR + GGEN+YP E+E L HP
Sbjct: 407 QPDKTAEAIDAARWMHTGDIGVMDEDGYVSVTGRIKDMVIRGGENIYPREIEEFLYTHPD 466
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
I+ VVG+ + + E ++A +R+RE + L ++ LR C K L
Sbjct: 467 ILDAQVVGVPDTKYGEELMAWIRMREGAE---------------PLDADSLRTFCTGK-L 510
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 559
+K PR +V + FP+T TGK+R+ E+R + ++ L++
Sbjct: 511 AHYKIPR-YVHVVEEFPMTVTGKVRKVEMREQAIALLEA 548
>gi|89092350|ref|ZP_01165304.1| acyl-CoA synthase [Neptuniibacter caesariensis]
gi|89083438|gb|EAR62656.1| acyl-CoA synthase [Oceanospirillum sp. MED92]
Length = 562
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 154/555 (27%), Positives = 242/555 (43%), Gaps = 88/555 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T + Q V AR L IG++ GD V + + N +EW + A A +G I+ +N +
Sbjct: 48 TYAELQQRVNEAARAFLAIGVKRGDRVGMWSPNCAEWTITQ-FATAKVGAILVNVNPAYR 106
Query: 93 FKEASRAITSIRPVMLVTDES-----------------SDSWYLELQHTAIPSLRWHVSL 135
E A+ LVT ++ D+ EL +P+L+ ++L
Sbjct: 107 LHELEYAMNQSEAKFLVTADTFKSSNYTQMLNELAPELKDAEEGELNSAKLPNLKGIINL 166
Query: 136 GSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+DFV + + L+ L F + + I +TSGTTG PKG
Sbjct: 167 AEEKHAGMWRWADFVEMAEKIDMSQLERIQ-SELQF------DDPINIQYTSGTTGFPKG 219
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPK-F 246
+SH ++ + + E D + PL H G + + + GA ++ F
Sbjct: 220 AALSHHNILNNGFFVAESMNFTEKDRLVIPVPLYHCFGMVMGNLGCITHGATMIYPDDAF 279
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E KS LEAV + T+L VP + +A + S++ + G P E+MK
Sbjct: 280 EPKSVLEAVAEERATALYGVPTMF--IAEMDHPDFDQYDVSSLRTGIMAGAICPEEVMKA 337
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ ++ AYGMTETS T DP + Q VG
Sbjct: 338 VNSKLHMKEVQIAYGMTETSPVSTQTAADDP--------------------FEKQVTTVG 377
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLD 416
+ PH+E K+ S +V G + TRG VML+YW+ P + G + W+
Sbjct: 378 RTQPHLETKIVDPASGNVVARGEVGELCTRGYSVMLKYWNN----PEATAGAIDNGGWMH 433
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + + E
Sbjct: 434 TGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYTHPSISDVQVTGVPDKKYGE 493
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
+VA V+L D+ ++ E L+ C+ K +T FK PR F + F
Sbjct: 494 ELVAWVKLA-------PGADE--------VTEEELKAFCKGK-ITHFKIPRYFK-FTDDF 536
Query: 537 PLTSTGKIRRDEVRR 551
P+T TGKI++ ++R
Sbjct: 537 PMTVTGKIQKFKMRE 551
>gi|375102706|ref|ZP_09748969.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
gi|374663438|gb|EHR63316.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora cyanea NA-134]
Length = 548
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 249/557 (44%), Gaps = 71/557 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVA 78
R+++V R T ++FV DV LA GLL G+ GD V I + N EW L A A
Sbjct: 37 DRDALVDHATGRRWTYREFVADVDALALGLLARGVAKGDRVGIWSPNCPEWTLTQ-YATA 95
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP---SLRWHVS 134
IG I+ +N + E + LV E S Y + P SL+ V
Sbjct: 96 KIGAILVNINPAYRSHELEYVLNQAGVSTLVAAERFKTSDYAGMIREVRPRCSSLQDVVL 155
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA---VIICFTSGTTGSPKGVVI 191
+G D T+ + G + + A GA + I +TSGTTG PKG +
Sbjct: 156 IGG---------DDWTSLLTSGREADPVALARAGAELGADDPINIQYTSGTTGFPKGATL 206
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESK 249
SH ++ + GY E D P H G+ +A GAC V P F+
Sbjct: 207 SHHNILNNGFFVGELCGYTEADRICLPVPFYHCFGMVMGNLAATSHGACMVIPAPAFDPG 266
Query: 250 SALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKE 306
LEAV+ TSL VP + +A+LA + ++ D S++ + G P E+MK+
Sbjct: 267 KTLEAVQAERCTSLYGVPTMFIAELA-----EPDFEDYDLASLRTGIMAGSPCPVEVMKQ 321
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A++ YGMTETS ++ T D +LE + VG
Sbjct: 322 VIERMGMAEVSICYGMTETSP-VSTQTRADDSLER-------------------RVSTVG 361
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
K PH+E+K+ + G + TRG VML YW+Q V W+ TGD+
Sbjct: 362 KVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMHTGDL 421
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
+D G V + GR + GGEN+YP E+E L HP I+ V+G+ +AR E ++A
Sbjct: 422 AVMDADGYVTITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDARYGEELMA 481
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
VR+R+ + +++E LR+ C + L +K PR +V FP+T
Sbjct: 482 WVRMRDGAE---------------PVTAESLREFCTGR-LAHYKIPR-YVHVVGEFPMTV 524
Query: 541 TGKIRRDEVRREVMSHL 557
TGKIR+ E+R + + L
Sbjct: 525 TGKIRKVEMREKAVELL 541
>gi|260904720|ref|ZP_05913042.1| AMP-binding domain protein [Brevibacterium linens BL2]
Length = 564
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 175/577 (30%), Positives = 253/577 (43%), Gaps = 78/577 (13%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
+A + +A V R+S R T +F +D LA GLLE G++ G+ V I A
Sbjct: 25 KATVAAHAQELALVDRHS------ERRWTYAEFDRDTDALAIGLLERGVKKGERVGIWAQ 78
Query: 66 N-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV--------------- 109
N +EW L A A IG I+ +N + E ML+
Sbjct: 79 NVAEWALVQ-YATAKIGAILVNVNPSYRSHELEYVAEQSGMSMLISQISAPPHSDFRAIA 137
Query: 110 TDESSDSWYLELQ--HTAIPSLRWHVSLGSSSSDFVN----KRDMLTADILKGYSLRSLP 163
T+ + LEL T L +G S F + RD+L K YS+R
Sbjct: 138 TEVAGKVAGLELVFIDTVPADLLGDAVIGERES-FAHLIGTGRDLLDDGAAK-YSVRLEK 195
Query: 164 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH 223
A + + I +TSGTTG PKGV +SH ++ ++ Y D + P H
Sbjct: 196 LAGELAMDDPINIQYTSGTTGFPKGVTLSHHNILNNGFFIGELLSYSAKDSVVLPVPYYH 255
Query: 224 IGGLS-SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 281
G+ +A L GA + P F+ +AL AV + TSL VP + + L
Sbjct: 256 CFGMVIGNLAALSHGAAIILPSPGFDPGAALSAVSEEKATSLYGVPTMF--IGELEHPDF 313
Query: 282 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 341
+ S++ + G P E+MK + ++ YGMTETS ++ MT D TLE
Sbjct: 314 SSYDLSSLRTGVMAGSPCPVEIMKRVISDMNMDEVAICYGMTETSP-VSMMTRVDDTLEA 372
Query: 342 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVM 395
Q VG+ PH+E+K+ + G + TRG VM
Sbjct: 373 RTQ-------------------TVGRVMPHLEIKIADPVTGQAVPRGQKGELCTRGYAVM 413
Query: 396 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
L YW+ W+ TGD+G +DD G V + GR + GGENVYP EVE L
Sbjct: 414 LGYWENQEKTAETIDASRWIHTGDLGIMDDNGYVDISGRIKDMVIRGGENVYPREVEEFL 473
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
HP I + VVG+A+ + E ++A V L++ + + L ++EV R+ C
Sbjct: 474 YHHPSIRDVQVVGVADEKYGEELMAWVILKDGF--------------DSLTAAEV-REFC 518
Query: 516 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K L FK PR +V R+ FP+T +GKIR+ E+R E
Sbjct: 519 NGK-LAHFKIPR-YVEVRESFPMTVSGKIRKIELREE 553
>gi|357589271|ref|ZP_09127937.1| AMP-binding domain protein [Corynebacterium nuruki S6-4]
Length = 569
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 156/573 (27%), Positives = 257/573 (44%), Gaps = 62/573 (10%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L+R A ++++ + G+ H T Q+F + VL LA GL G R GD + + + N
Sbjct: 40 IGQNLARTVAAFPDNDALIDLYGDIHLTYQEFHRKVLRLASGLHNAGYRKGDRIGVWSPN 99
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLEL--- 121
++ A A IG I+ +N + +E + A+ + IR + DS Y +
Sbjct: 100 RWEWMVLQFATAEIGAILVCINPTYRTRELTYAVNQSGIR-ALFSAGRFKDSNYRAMIGA 158
Query: 122 -QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+HT R V GS + + +L + P S P + I +TS
Sbjct: 159 VEHTFDRPYRETVFFGSERWEELANSAILDLN----------PVRESLDPHDPINIQYTS 208
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 239
GTTG KG ++H ++ + Y + D + P H G+ +A + GA
Sbjct: 209 GTTGMAKGATLTHHNVLNNGFMIGERLDYTDADRVVVPVPFFHCFGMVIGILAAVTHGAA 268
Query: 240 HVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNG 295
+ P F +++ LEA TSL+ VP + MA+L L +++ K D ++ +
Sbjct: 269 TIIPGPVFNAENTLEAAHHGQATSLLGVPTMFMAELQLLDHLEEKGKKLDLSRLRTGVMA 328
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P++ M+E + +++ YGMTETS + T+ P+
Sbjct: 329 GTSCPTKTMREIIDILGISEIGICYGMTETSP-VNHQTM-------------------PD 368
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVST 410
+ VG+ PH+E+K+ V G +L RG VM YWD
Sbjct: 369 DPVTKRVETVGRVGPHIEVKIVDRDGDAVARGVQGELLVRGYSVMQGYWDMPEKTAEAVD 428
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
+ W+ TGD+G +DD G V + GR + GGEN+YP EVE L +HP + + V+G+
Sbjct: 429 ADGWMHTGDLGQMDDDGYVQITGRIKDMVIRGGENIYPREVEEFLYEHPDVADVQVIGVP 488
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+ + E ++A + L D++ + L + +V R C K L FK P+ +V
Sbjct: 489 DEKYGEELMAWIIL----------SDEAREAGRTLTAGDV-RGFCDGK-LARFKVPK-YV 535
Query: 531 LWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 563
FP+T +GK+R+ E+R + + L P +
Sbjct: 536 HVTDSFPMTISGKVRKVEMREKAIGILGMYPMD 568
>gi|389730176|ref|ZP_10189351.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
gi|388440948|gb|EIL97268.1| acyl-CoA synthetase [Rhodanobacter sp. 115]
Length = 561
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 169/579 (29%), Positives = 254/579 (43%), Gaps = 70/579 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I L RIAA +R ++V + F +V +A GLL +GL+ GD V I A N
Sbjct: 21 IGALLDRIAATHPERPALVVRAQAVRMDYRAFHAEVERVAAGLLALGLQRGDRVGIWAPN 80
Query: 67 -SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHT 124
+EW L A G I+ +N + E A+ ++ +++ S YLEL H
Sbjct: 81 RAEWVL-LQFAAPKAGLILVNINPAYRAHELEHALHVVQWRALVLPRRFKSSHYLELLHE 139
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLR------------SLPFTHSWAPE- 171
+P L +S+ R+++ D + R +L H E
Sbjct: 140 LVPELDAATPGALASARLPELREVILLDDEAAHGTRLWCELVGLGDTATLAHLHEAEREL 199
Query: 172 ---GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
V I FTSGTTG+PKG ++H ++ + E D P H G+
Sbjct: 200 GFDDPVNIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEHDRLCIPVPFYHCFGMV 259
Query: 229 -SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 285
+A + GAC V IP F++ + LE V T L VP + +A L +
Sbjct: 260 LGNLACVTHGACMV-IPGEGFDALATLETVAAEKCTGLHGVPTMF--IAELEHPRFAEFD 316
Query: 286 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 345
S++ + G P E+M+ A++ AYGMTETS ++F TL + LE
Sbjct: 317 LSSLRTGIMAGSPCPIEVMRRVVGEMHMAEVTIAYGMTETSP-VSFQTLPEDPLER---- 371
Query: 346 PQAFGNVTPNSVHQPQGVCVGKPAPHVELK-VCSDGS----SHVGRILTRGAHVMLRYWD 400
+ +G+ PHVE+K V +DG G + TRG VML YW
Sbjct: 372 ---------------RVDSIGRVHPHVEVKLVDADGRIVPRGEPGELCTRGYSVMLGYWQ 416
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
W+ TGD+ ++DD G +VGR I GGENVYP E+E L HP
Sbjct: 417 DEARTREAIDAAGWMHTGDLATLDDDGYCRIVGRLKDMIIRGGENVYPREIEEFLYTHPK 476
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
++ + V G+ +A+ E V A VRLRE Q SE+ ++ +CR + L
Sbjct: 477 VLDVQVFGVPDAKFGEQVCAWVRLREGTQASEAE----------------IQDYCR-RRL 519
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 559
+K P +V + FP+T TGK+++ +R + + L +
Sbjct: 520 AYYKVPH-YVRFVDAFPMTVTGKVQKYLMREAMATELAA 557
>gi|73537349|ref|YP_297716.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha JMP134]
gi|72120686|gb|AAZ62872.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 525
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 242/556 (43%), Gaps = 61/556 (10%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A + + + +A V++ + + R T F +A GLL GL GD +A N
Sbjct: 7 ATLPRAVQHLARVQKTQIAYVFEGRETTYGAFGTHTDRVANGLLAAGLAPGDRIAYLGKN 66
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT-- 124
+ Y E ++ A G ++ P+++R + E +L S +EL +
Sbjct: 67 CDHYFELLIGAAKAGVVITPISWRLAAPEVEYIAADCDAALLFVGNES----VELAQSIA 122
Query: 125 -AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+P+LR V++ + D+ +D + P TH P+ V+ +TSGTT
Sbjct: 123 SQLPALRGVVAMEDAVVDWPAYQDWRDGQA-------TTPPTHVSRPDDVVLQLYTSGTT 175
Query: 184 GSPKGVVISHSALIVQSL----AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
G PKG +++H L V ++ IA + + DDV L P+ HIGG + L+ GA
Sbjct: 176 GRPKGAMLTHRNLTVSAIIAERENIAWLRWVPDDVSLVAMPVAHIGGTGWGLRGLLAGAK 235
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
+ + F+ + L+ + ++ L VP+ + + R ++ R ++ ++ G +
Sbjct: 236 GIVVRDFDPRRVLDFIANDRISKLFLVPSAIQIVLRDPRARQVNYSR--LRYLIYGSAPM 293
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P++L++E F + YGMTET+ S+T + D A GN
Sbjct: 294 PADLLREGMEVF-GCGFVQTYGMTETTGSVTGLMPED----------HASGNTALLR--- 339
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
G+ P E+ V HV G ++ R M YW Q + W
Sbjct: 340 ----AAGRALPWAEVAVVDAAGKHVPPGEVGEVIVRSLQTMAGYWKQPEETARAIDADGW 395
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L TGD G +D +++ R I SGGENVYP EVE + HP + + V+G+ +AR
Sbjct: 396 LRTGDAGYMDADDYLYIHDRVKDMIISGGENVYPAEVENAIYGHPHVAEVAVIGVPDARW 455
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A V R+ + +++L Q RE+ L GFK P+ + +
Sbjct: 456 GEAVKAIVVPRDG---------ATPDARDIL-------QWARER-LAGFKLPK-SIDFVD 497
Query: 535 PFPLTSTGKIRRDEVR 550
P +GK+ R ++R
Sbjct: 498 ALPRNPSGKVLRRQLR 513
>gi|408681796|ref|YP_006881623.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
gi|328886125|emb|CCA59364.1| acetoacetyl-CoA synthetase or Long-chain-fatty-acid--CoA ligase
[Streptomyces venezuelae ATCC 10712]
Length = 534
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 237/547 (43%), Gaps = 69/547 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T QF DV LA LL G+R GD V I A+N EW+L A
Sbjct: 36 DREALVDLATGRRWTYAQFGADVDRLAGSLLGSGVRKGDRVGIWAVNCA---EWVLVQYA 92
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVML---VTDESSD-SWYLELQHTAIPSLRWH 132
A IG ++ +N + E + + +L + ++SD +E P LR
Sbjct: 93 TARIGAVMVTINPAYRAHELAYVLNQAGITLLFASLAHKTSDYRAMVEQVRPECPELREA 152
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V G D R LR P + + V I +TSGTTG PKG +S
Sbjct: 153 VYFGDLGWDVFLDR--------TPGELRPEPLSC----DEPVNIQYTSGTTGFPKGATLS 200
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ ++ Y E D P H G+ +A GAC V P F+ +
Sbjct: 201 HHNILNNGYFVGEMIAYSEQDRICIPVPFYHCFGMVMGNLAATSHGACMVIPAPSFDPAA 260
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 261 TLRAVQEERCTSLYGVPTMF--IAELNLPDFGTYDLSSLRTGIMAGSPCPVEVMKRVVAE 318
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
A++ YGMTETS T T D LE + VG+ P
Sbjct: 319 MNMAEVSICYGMTETSPVST-QTRRDDDLER-------------------RTGTVGRVMP 358
Query: 371 HVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
HVE+KV + G + TRG VML YWD+ W+ TGD+ ++
Sbjct: 359 HVEVKVVDPATGLTVARGTAGELCTRGYSVMLGYWDEPEKTGEAIDAGRWMHTGDLATMR 418
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V +VGR I GGENVYP E+E L HPGI + VVG+ + R E ++ACV
Sbjct: 419 DDGYVQIVGRIKDMIIRGGENVYPREIEEFLHGHPGIADVQVVGVPDERYGEEILACVIP 478
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R D ++ + E + CR++ L +K PR + + FP+T +GK+
Sbjct: 479 R----------DPAAPP-----TLEDVTAFCRDR-LAHYKIPRRLEILTE-FPMTVSGKV 521
Query: 545 RRDEVRR 551
R+ E+R+
Sbjct: 522 RKVELRQ 528
>gi|291007274|ref|ZP_06565247.1| putative feruloyl-CoA synthetase [Saccharopolyspora erythraea NRRL
2338]
Length = 477
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 236/534 (44%), Gaps = 68/534 (12%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAP 86
+ G R +T + LARGL +G+R GD V N YLE + A A +G + P
Sbjct: 4 VQGERRDTYADLARRTAALARGLRGLGVRRGDRVGYLGPNHPAYLETLFASASLGAVFVP 63
Query: 87 LNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+N R + E + + +LV ++ + +L + A P LR + + S +
Sbjct: 64 VNTRLAAAELAYVLADAGVSVLV--HTAAAGHL-VDAAASPVLRERLVVDEDSYE----- 115
Query: 147 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
D+ G P + +I +TSG+TG PKG V+SH L + +
Sbjct: 116 -----DVAGG---TGEPVAEPVGLDDPCLIMYTSGSTGRPKGAVLSHGNLTWNCVNVLVE 167
Query: 207 VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLIT 265
+V L APL H L + + L+ G V + FE ALE + +H VT L
Sbjct: 168 SDLSGSEVALVAAPLFHTAALGMTCLPTLLKGGTVVLMESFEPAVALELIARHRVTLLFG 227
Query: 266 VPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VP + +A + +W+ D SV+ +L GG +P ++ + + YGMT
Sbjct: 228 VPTMYDAIAA----QPSWESADLSSVRTLLCGGSPVPDATIRRYLDR--GLVFVQGYGMT 281
Query: 324 ETSSSLTFMTLYDP----TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
ETS + + DP T +P F +V SV P G V
Sbjct: 282 ETSPGVLIL---DPDAVRTKAGTAGVPSFFTDV---SVVDPSGNPVA------------- 322
Query: 380 GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 439
+ G I+ RG +VML YW+Q A +G W+ +GD+ ++D+ G + +V R I
Sbjct: 323 -AGERGEIVVRGPNVMLGYWNQPDATDEALSGG-WMHSGDVATVDEDGYITIVDRIKDLI 380
Query: 440 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 499
SGGENVYP EVE+ L +HP + VVG+ + + E+ A V LR + + D+
Sbjct: 381 ISGGENVYPAEVESALYEHPAVELCAVVGVPDPKWGEVPRAAVVLRPG---AGATADE-- 435
Query: 500 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
LR H R ++L +K P+ W P T GKIR+ VR +
Sbjct: 436 -----------LRDHLR-RHLAAYKVPKQVDFWDD-LPRTGAGKIRKQAVRERL 476
>gi|302541757|ref|ZP_07294099.1| substrate-CoA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302459375|gb|EFL22468.1| substrate-CoA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 566
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 167/559 (29%), Positives = 239/559 (42%), Gaps = 65/559 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V I R T +F + V +A GL+ G+ GD V I A+N EW+L A
Sbjct: 45 REALVDIPSGRRWTYAEFGRSVDAVALGLMAKGVGKGDRVGIWAVNCP---EWVLVQYAT 101
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD-ESSDSWY---LELQHTAIPSLRWHV 133
A IG I+ +N + E + +LV+ E DS Y +E P+LR V
Sbjct: 102 ARIGAIMVNVNPAYRVHELRYVLRQAGVSVLVSSTEHKDSDYRRMVEQVRAECPALRDVV 161
Query: 134 SLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+G + D V + + + L R + + V I +TSGTTG PKG +S
Sbjct: 162 YIGDRTWDGLVRAGEAVPEEKLAEREAR-------LSCDDPVNIQYTSGTTGFPKGATLS 214
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ VGY E D P H G+ + GAC V P F+ +
Sbjct: 215 HHNILNNGYFVGETVGYTEQDRICLPVPFYHCFGMVMGNLGATTHGACIVIPAPAFDPAA 274
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AVEQ TSL VP + +A L S++ + G P E+M+
Sbjct: 275 TLSAVEQERCTSLYGVPTMF--IAELALPDFATFDLTSLRTGIMAGSPCPVEVMRRVVAE 332
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
A++ YGMTETS T D G VG+ P
Sbjct: 333 MHMAEVSICYGMTETSPVSTQTRRDDDLARRTGT--------------------VGRVLP 372
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
+VE+KV + G + TRG VML YW++ W+ TGD+ +D
Sbjct: 373 YVEVKVMDPATGLTVPRGTRGELCTRGYSVMLGYWEEPDLTAEAIDPAGWMHTGDLAVMD 432
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGENVYP E+E L HP I + VVG+ + + E ++ACV L
Sbjct: 433 EHGYVQIVGRIKDMIIRGGENVYPREIEEFLHTHPKIADVQVVGVPDEKYGEEILACVIL 492
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
RE L+ + L + CR + L FK PR + FP+T +GK+
Sbjct: 493 REG---------------ATALTRDELARFCRGR-LAAFKVPRHLRVM-DAFPMTVSGKV 535
Query: 545 RRDEVRREVMSHLKSLPSN 563
R+ E+R L +P +
Sbjct: 536 RKVELRETGARELAGVPES 554
>gi|333922026|ref|YP_004495607.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
gi|333484247|gb|AEF42807.1| Substrate-CoA ligase [Amycolicicoccus subflavus DQS3-9A1]
Length = 556
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 166/559 (29%), Positives = 249/559 (44%), Gaps = 71/559 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R ++V R T +V +A GL+ +G+R D V I A N +EW LA A
Sbjct: 48 REALVDRPSGRRWTYAALADEVNTVAAGLIALGVRKEDRVGIWAPNCAEWVFTQ-LATAK 106
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIPS---LRWHVSL 135
IG I+ +N + +E + +LV + S Y + P L + L
Sbjct: 107 IGAILVNINPAYRTQELEYVLNQAGIKVLVAAAAFKTSDYQAMVAEVRPKTTRLEHAIFL 166
Query: 136 GSSS--SDFVNKRDML--TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
GSS S F + D L ADI++ + + + A+ I +TSGTTG PKG +
Sbjct: 167 GSSEWHSIFTSGADSLRADADIVRKAQAK-------LSADDAINIQYTSGTTGFPKGATL 219
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESK 249
SH ++ ++ Y E+D P H G + +A + G+ V P FE +
Sbjct: 220 SHHNILNNGFFVGELLSYTEEDRVCIPVPFYHCFGMVMGNLACVSHGSTMVIPAPSFEPQ 279
Query: 250 SALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKE 306
+ L+AV + TSL VP + +A+L + + G D +++ + G P E+MK+
Sbjct: 280 ATLQAVSEERCTSLYGVPTMFIAELN-----EPDFDGYDFSNLRTGVMAGSPCPVEIMKQ 334
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A++ YGMTETS T N + + VG
Sbjct: 335 VIERMGMAEVSICYGMTETSPVST--------------------QTRKNDSIEHRVSTVG 374
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+K+ + G TRG VML YWDQ W+ TGDI
Sbjct: 375 QVGPHLEIKIVDPATGQTVPRGTPGEFCTRGYSVMLGYWDQPDKTAEAIDAARWMHTGDI 434
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
+DD G V + GR + GGENVYP E+E L HP ++ V+G+ + + E ++A
Sbjct: 435 AVMDDEGYVSITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDEKYGEELMA 494
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V+LRE + L++E LR+ C K L +K PR +V FP+T
Sbjct: 495 WVQLREDAE---------------PLTAEALREFCTGK-LAHYKIPR-YVHIVDEFPMTI 537
Query: 541 TGKIRRDEVRREVMSHLKS 559
TGKIR+ E+ RE+ L S
Sbjct: 538 TGKIRKVEM-REIAKQLIS 555
>gi|381163253|ref|ZP_09872483.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
gi|379255158|gb|EHY89084.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora azurea NA-128]
Length = 547
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 248/556 (44%), Gaps = 70/556 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R+++V R T ++F DV LA GLL G+ GD V I A N EW L A
Sbjct: 37 DRDALVDHGSGRRWTYREFAADVDALALGLLSRGVAKGDRVGIWAPNCP---EWTLLQYA 93
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE----SSDSWYLELQHTAIPSLRWH 132
A +G I+ +N + E + +LV E S + + P LR
Sbjct: 94 SAKVGAILVNINPAYRSHELEYVLNQAGVSLLVAAETFKTSDYAGMIREVRPRCPVLRDV 153
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +GS+ D + + L S + + + I +TSGTTG PKG +S
Sbjct: 154 VLIGSADWDSLFGEPSAGNEALARVQA-------SLSADDPINIQYTSGTTGFPKGATLS 206
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ + Y E+D P H G+ +A GAC V P F+ ++
Sbjct: 207 HHNILNNGFFVGQLCDYTEEDRICLPVPFYHCFGMVMGNLAATSHGACMVIPAPAFDPRA 266
Query: 251 ALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEA 307
LEAV+ TSL VP + +A+LA ++ D S++ + G P E+MK+
Sbjct: 267 TLEAVQAERCTSLYGVPTMFIAELAV-----PGFEDYDLGSLRTGIMAGSPCPVEVMKQV 321
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+++ YGMTETS T T D ++E + VG+
Sbjct: 322 IERMGMSEVSICYGMTETSPVST-QTRKDDSIER-------------------RVSTVGR 361
Query: 368 PAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PH+E+KV + G + TRG VML YW+Q V W+ TGD+
Sbjct: 362 VGPHLEVKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMHTGDLA 421
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+DD G + + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++A
Sbjct: 422 VMDDDGYLGITGRLKDLVIRGGENVYPREIEEFLYSHPDILDAQVIGVPDAKYGEELMAW 481
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
VR+R+ + +++E LR+ C + L +K PR +V FP+T T
Sbjct: 482 VRMRDGAE---------------PVTAESLREFCTGR-LAHYKIPR-YVHVVDEFPMTVT 524
Query: 542 GKIRRDEVRREVMSHL 557
GKIR+ E+R + + L
Sbjct: 525 GKIRKVEMREKAVELL 540
>gi|182435126|ref|YP_001822845.1| AMP-binding protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178463642|dbj|BAG18162.1| putative acyl-CoA synthetase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 535
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 248/563 (44%), Gaps = 73/563 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R AA R ++V + R T +FV DV LAR L+ G+ GD V I A+N
Sbjct: 20 IGRNLDRTAAEHGDREALVDVASGRRWTYAEFVADVDVLARALMAAGVAKGDRVGIWAVN 79
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYL- 119
EW+L A A IG ++ +N + E + +LV + +SD L
Sbjct: 80 CP---EWVLVQYATARIGAVMVTINPAYRAHEVEFVLRQAGVSLLVASLSHRTSDYRALV 136
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
E + P LR +G S D LTA + + + + I +T
Sbjct: 137 EQVRSDCPDLRAVHYIGDPSWD------ELTAGAPAVGQEQLAAREAELSCDDPINIQYT 190
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 238
SGTTG PKG +SH ++ + Y E D P H G+ +A GA
Sbjct: 191 SGTTGFPKGATLSHHNILNNGYFVGETIAYTEADRVCLPVPFYHCFGMVMGNLACTSHGA 250
Query: 239 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNG 295
C V P FE + L AV+Q TSL VP + L + G D S++ +
Sbjct: 251 CIVIPGPSFEPGAVLTAVQQERCTSLYGVPTMFIAELNL----PDFAGYDLSSLRTGIMA 306
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P+E+MK A++ YGMTETS ++ T D LE
Sbjct: 307 GSPCPAEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDLER-------------- 351
Query: 356 SVHQPQGVCVGKPAPHVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PH+E+KV GSS G + TRG VML YWDQ
Sbjct: 352 -----RTGTVGRALPHIEVKVVDPVTGVTLPRGSS--GELRTRGYSVMLGYWDQPDRTAD 404
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
V W+ TGD+ + + G V +VGR I GGENVYP E+E L HP + + VV
Sbjct: 405 VVDPGRWMHTGDLAVMREDGYVQVVGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQVV 464
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + R E ++ACV R+ D + ++ + +CRE+ L +K PR
Sbjct: 465 GVPDERYGEEILACVIPRDP-------ADPPTLDE--------ISAYCRER-LAHYKIPR 508
Query: 528 LFVLWRKPFPLTSTGKIRRDEVR 550
+ + FP+T +GK+R+ E+R
Sbjct: 509 RLRIL-ETFPMTVSGKVRKVELR 530
>gi|160900258|ref|YP_001565840.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160365842|gb|ABX37455.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 520
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 245/555 (44%), Gaps = 62/555 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q + + + + I G + Q Q + A L + + GD V + LNS
Sbjct: 4 YLTQAIHKGRRERAGATAAICGEEQASWSQLAQRIERCAGLLRALDVAPGDRVGMMGLNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ----- 122
YLE+ + G V P+N RWS +E + ++ +L D++ L+
Sbjct: 64 IRYLEYFYGCWWAGAAVNPVNIRWSAQEVAYSLDDCDTRVLFVDDAFAPLVPRLRELSSS 123
Query: 123 -HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
HT + G++ ++ +L A +LRS + +T G
Sbjct: 124 LHTVV-----FCGTGAAPEGALHYEQLLAAATPCADALRS--------GNDLAAVMYTGG 170
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV++SH L + +L+ + V V + P+ H+ G A+ M V
Sbjct: 171 TTGRPKGVMLSHDNLFINALSNASNVPRQHVKVGMVVTPMFHVAGCGLALLMAQRLVPQV 230
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+P F+ + L ++QH V L VP ++ L R+ + S++ +L G + +
Sbjct: 231 IVPAFDELAILAGIQQHGVNELFLVPTMIRRLIEHPRLAEF--DLSSLRLMLYGAAPIDA 288
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
L++ A P A AYGMTE S ++ M P PG PQ +
Sbjct: 289 TLLERAMQLLPGADFAQAYGMTELSPTIVSM---GPAEHRPG--PQ----------RERL 333
Query: 362 GVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
G+P E+++ DG VG I RG VM YW++ A+ + + + W+
Sbjct: 334 LRAAGRPVTIAEVRIV-DGEGRELPPGEVGEITARGPMVMQGYWNR-PAETAAALKDGWM 391
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G +D G +++V R I SGGENVY EVE + Q + V+G+ + R
Sbjct: 392 HTGDMGRLDADGYLFVVDRLKDMIVSGGENVYSAEVENAIAQLSQVAMCAVIGVPDERWG 451
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A + RE +E +EV+ HCRE+ + G+K PR V +R
Sbjct: 452 ERVHAVIVAREGQPLTE---------------AEVI-AHCRER-IAGYKCPR-SVEFRAE 493
Query: 536 FPLTSTGKIRRDEVR 550
PL++ GK+++ ++R
Sbjct: 494 LPLSAAGKLQKFQLR 508
>gi|407698020|ref|YP_006822808.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255358|gb|AFT72465.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 517
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 244/535 (45%), Gaps = 59/535 (11%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAP 86
+ +R +T + + V LA L +GL G+ I ALNS+ Y+ ++ V + GG+
Sbjct: 21 VFADRRSTYRDLARQVATLASVLKGLGLEEGERAGILALNSDRYVTFVFGVLWAGGVFNT 80
Query: 87 LNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+N RWS E + ++ +L D+ E++ + SL V +G
Sbjct: 81 VNIRWSPVEIAYSLDDCDTRVLFVDDEFVPLIKEVRALS-KSLEIVVYIGEKGC----PD 135
Query: 147 DMLT-ADILKGYSLRSLPFTH-SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 204
ML A+++ G P + + I +T GTTG+PKGV++SH+ L S+ +
Sbjct: 136 GMLNLAELMAGAD----PVDDVGRSGDQLACILYTGGTTGAPKGVMLSHANLYTCSIGAV 191
Query: 205 AIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLI 264
G+ V LH+AP H+ G+ + + + HV +P+FE + + A+++ V
Sbjct: 192 MPACRGDGVVGLHSAPFFHVAGVGLILQLTLRLGTHVIVPRFEEVAVMSAIQRERVVETF 251
Query: 265 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 324
VP +M A L + S++ ++ G + S L+K+A ++P+A + YGMTE
Sbjct: 252 LVPTMMR--AVLAHPRFPEFDLSSLRCMMYGASPIDSTLLKKAMTAWPEASFLQLYGMTE 309
Query: 325 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-- 382
S + + Y + + + + G PA E++V +
Sbjct: 310 LSPVVCILPDY----------------CHSDDAYADKLMAAGLPAHMAEVRVVDSEDNEV 353
Query: 383 ---HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRN 436
VG I+ RG VM YW+ KP + + W+ TGD G +DD G ++LV R
Sbjct: 354 PRGQVGEIVARGPMVMQGYWN----KPEQTEEALRQGWMHTGDAGYMDDAGYIFLVDRIK 409
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
+ +GGENVY EVE LL+ P I V+G+ + + E V A + L + +E++
Sbjct: 410 DMVVTGGENVYSVEVEDALLRMPAIAQCAVIGVPDEKWGERVHAVIVLAAGAEVAEAD-- 467
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+ HC+ + +K PR F L + PL+ GKI + +++
Sbjct: 468 --------------IVAHCKTL-IANYKCPRSFELVDQ-MPLSGAGKILKYKLKE 506
>gi|138895109|ref|YP_001125562.1| AMP-binding protein [Geobacillus thermodenitrificans NG80-2]
gi|196248309|ref|ZP_03147010.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|134266622|gb|ABO66817.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
gi|196212034|gb|EDY06792.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 544
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 153/561 (27%), Positives = 247/561 (44%), Gaps = 78/561 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV N T +QF +ARGL+ +G+ G+ VAI A N ++ A +
Sbjct: 20 REAVVYADRNLRLTYRQFNDYCRLVARGLMRLGIEKGEHVAIWATNVPEWIACQFATGKM 79
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E + S + + ++ DS Y+++ ++ +P LR G
Sbjct: 80 GAVLVTVNTNYQAAELEYLLKQSDSTTLFLIEQYRDSSYIDILYSIVPELRT-AEPGKLQ 138
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFT--------------------HSWAPEGAVIICFT 179
S + K L +L G FT S P A+ + +T
Sbjct: 139 SKRLPK---LKNVVLLGDKRYPGMFTWNDILAMAHEVTEEELDERLESLDPHDAINMQYT 195
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 238
SGTTG PKGV++SH ++ + + GE D P H G + S +A + VGA
Sbjct: 196 SGTTGFPKGVMLSHYNIVNNAHQVAQCMKLGEGDRLCIPVPFFHCFGCVMSTLACVTVGA 255
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
V + +F K LE V T+L VP + +A L S++ + G
Sbjct: 256 TMVPVVEFHPKRVLETVAAERCTALHGVPTMF--IAELNDPDFDQYDLSSLRTGIMAGSP 313
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQAFGNVTPN 355
P E+MK N + AYG TE+S +T DP +ET
Sbjct: 314 CPVEVMKAVINKMGMTDITIAYGQTESSPVITQTRTDDPIELRVET-------------- 359
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 409
VG+ P VE+K+ G+ + G + TRG HVM Y++ A
Sbjct: 360 ---------VGRALPGVEVKIVEPGTCNEVPRGVQGELCTRGYHVMKGYYNNPEATNEAI 410
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I+ + VVG+
Sbjct: 411 DEDGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGV 470
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ R E V+A + L++ ++E +R+ CR N++ K PR +
Sbjct: 471 PDERYGEEVMAWIILKDGET----------------ATAEEIREFCR-GNISRHKIPR-Y 512
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
+ + +P+T++GKI++ ++R
Sbjct: 513 IEFTDSYPMTASGKIQKFKLR 533
>gi|302538259|ref|ZP_07290601.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
gi|302447154|gb|EFL18970.1| cyclohexanecarboxylate-CoA ligase [Streptomyces sp. C]
Length = 545
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 250/558 (44%), Gaps = 67/558 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R+++V + R T + DV LA GLL++G+ +GD V I A N +EW L A A
Sbjct: 38 DRDALVDVAAGRRWTYAELAADVDVLALGLLDLGITAGDRVGIWAPNRAEWTLVQ-YATA 96
Query: 79 FIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP---SLRWHV 133
IG I+ +N YR E + IR +++ S Y + P L + V
Sbjct: 97 KIGAILVTVNPAYRSHELEYVLNQSGIR-LLVAAAGFKGSDYAAMIEEVRPRCADLEFTV 155
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
L D + +R +G + P V I +TSGTTG PKG +SH
Sbjct: 156 LLDGPLWDSLRERGA------QGDPADLARAAAALDPGDPVNIQYTSGTTGFPKGATLSH 209
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVF-IPKFESKSA 251
++ + GY E D P H G+ A+A GA V P F+ +
Sbjct: 210 RNILNNGFFVGELCGYTERDRVCVPVPFYHCFGMVMGALACTSHGAAMVIPAPAFDPAAT 269
Query: 252 LEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEAT 308
L AVE TSL VP + +A+LA + G D S++ + G P E+M E
Sbjct: 270 LAAVEAEACTSLYGVPTMFIAELAA-----PGFDGYDLSSLRTGIMAGSPCPVEVMNEVI 324
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
A++ YGMTETS ++ T D ++E + VG+
Sbjct: 325 ERMGMAEVSICYGMTETSP-VSTQTRVDDSVER-------------------RVSTVGRV 364
Query: 369 APHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+KV + G + TRG VML YW + GE W+ TGD+
Sbjct: 365 GPHLEVKVVDPETGATVPRGTPGELCTRGYSVMLGYWGEPQKTAEAVDGEGWMHTGDLAV 424
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D G + + GR + GGEN+YP E+E L HP ++ + V+G+ +A+ E ++A V
Sbjct: 425 MDADGYLAITGRIKDMVIRGGENLYPREIEEFLHGHPDVLDVQVIGVPDAKYGEELMAWV 484
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
R+RE + L++E +R +C + L FK PR +V FP+T TG
Sbjct: 485 RMREGAE---------------PLTAETVRAYCSGR-LAHFKIPR-YVHVVDEFPMTVTG 527
Query: 543 KIRRDEVRREVMSHLKSL 560
KIR+ E+R L+S+
Sbjct: 528 KIRKVEMREAAARLLESM 545
>gi|359765441|ref|ZP_09269267.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359317165|dbj|GAB22100.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 561
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 167/550 (30%), Positives = 248/550 (45%), Gaps = 71/550 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T +F +DVL LA GL +G+ +GD V + + N EW+L A A IG I+ LN
Sbjct: 59 TYAEFRRDVLALAAGLCRLGVAAGDRVGLWSPNRA---EWVLTQYATAEIGAILVNLNPA 115
Query: 91 WSFKEASRAIT-SIRPVMLVTDESSDSWY---LELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+ E A+T S V++ + DS Y L A P LR V SS +
Sbjct: 116 YRQHEIEYALTQSGTSVVVAAERYKDSDYAGMLAAARPAAPELREVVLF--ESSQWAELT 173
Query: 147 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
TAD L + R+ T + + I +TSGTTG PKG +SH + +
Sbjct: 174 APPTADELAAVADRAAGLTA----DDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGEL 229
Query: 207 VGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLI 264
+ Y DD P H G + +A GA V P F+ ++AL AV H TSL
Sbjct: 230 LDYSADDRICIPVPFYHCFGMVMGNLAATSHGATMVIPSPTFDPEAALRAVADHKCTSLY 289
Query: 265 TVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VP + +A+LA L + +++ + G P +M++ + ++ YGMT
Sbjct: 290 GVPTMFIAELALLDSGAEF--DLSTLRTGIMAGSPCPEHVMRQVVDRMHMGQVSICYGMT 347
Query: 324 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 383
ETS T + DP G VG+ PH+E+KV S
Sbjct: 348 ETSPVSTQTRMDDPLELRVG--------------------TVGRVGPHLEVKVIDPVSGE 387
Query: 384 V------GRILTRGAHVMLRYWDQ-------FLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
G TRG VM YW+Q + +P+ G W+ TGD+ +D G V
Sbjct: 388 TLRRGETGEFCTRGYSVMSGYWNQPDKSAEVLIPEPTDPQGSPWMRTGDLAVMDPNGYVR 447
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A +RLR
Sbjct: 448 ITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLR----- 502
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
D +S+ L+++ +R+ K + K PR FV K FP+T TGK+R+ ++R
Sbjct: 503 -----DGASE-----LTADDVREFATGK-IARHKIPR-FVHVVKEFPMTVTGKVRKVQMR 550
Query: 551 REVMSHLKSL 560
E + L +L
Sbjct: 551 EESVEILGTL 560
>gi|385264992|ref|ZP_10043079.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
gi|385149488|gb|EIF13425.1| short-chain acyl-CoA synthetase [Bacillus sp. 5B6]
Length = 546
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 154/575 (26%), Positives = 255/575 (44%), Gaps = 68/575 (11%)
Query: 11 QCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ L R A + R +VV T +F + A+GL+++G+ GD VAI A N
Sbjct: 11 KLLERTAELFPDREAVVYPERGLRYTYAEFDRLCRQTAKGLMKLGVEKGDHVAIWASNIP 70
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIP 127
+L A A IG ++ +N + E + S +++ D + Y+E+ + IP
Sbjct: 71 EWLAAQFATAKIGAVLVTINTNFQIAELDYLLAHSDVSALIIMDSYRQTSYVEIVNKLIP 130
Query: 128 SL----------------RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE 171
L R + +G S V++ D L D S +
Sbjct: 131 ELKTCERGRLRSKRYPFLRTVLYIGDKSPPGVHRWDSLLKDAESVTDAELDGRMDSLKKD 190
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSS 229
+ + +TSGTTG PKGV++SH IV + A IA + D P H G +
Sbjct: 191 DCIHMQYTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLG 249
Query: 230 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 289
+A + GA + I +F + L+ VEQ T+L VP + +A L + + V
Sbjct: 250 VLACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLHDSRFSEYDLSHV 307
Query: 290 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 349
+ + G P+E+M+E + AYG TE S +T T D + + +
Sbjct: 308 RTGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFKRRVE----- 361
Query: 350 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFL 403
G+ PH+E ++ G+S G + TRG HVM Y+
Sbjct: 362 --------------TAGRALPHIEFRIVRPGTSQEADRGEQGELCTRGYHVMKGYYKNQE 407
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
A + WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP +
Sbjct: 408 ATEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVAD 467
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
+ VVG+ + + E A VRL++ Q++ S+E +R C+E ++ +
Sbjct: 468 VQVVGVPDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIARY 510
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
K PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 511 KVPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|441506878|ref|ZP_20988806.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441448943|dbj|GAC46767.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 545
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 242/550 (44%), Gaps = 54/550 (9%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I + + R A K + V I G R T ++F + + A G+ D +A NS
Sbjct: 28 IIETVDRWVARKPDDVAVIYGERQFTWREFRERIGRNATAQAAAGIGPNDRIAFLDKNSI 87
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRP-VMLVTDESSDSWYLELQHTAIP 127
LE +A + G A +N+R S E + I + +++V E D + +P
Sbjct: 88 ACLETTMAASLTGAANAVINFRLSPAEVAYIINDAKASIVIVGAEFVD--VIAALRDELP 145
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
++ + G ++ + AD + ++PF PE A + +TSGTTG PK
Sbjct: 146 TVTRVIVSGGPDDEY----ERWLADAAAPF--EAVPFD----PETAFLQLYTSGTTGHPK 195
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFE 247
G +++H +L S A +A + D V + PL H+GG S A+A + VGA V + +
Sbjct: 196 GAMLTHHSLGAHSAAAVAGFHFTGDSVNMVAMPLFHVGGSSWALAAMSVGAQTVIVRETI 255
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+ L+ + VT VPA+ L +V + + +V+ GG +P ++
Sbjct: 256 PAAILDEIVARAVTHAFFVPAVYGFLLADPQVAE--RDYSTVRCFGYGGSPMPLPTIRAC 313
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
++P YGMTE S + DP + P+ V G+
Sbjct: 314 LKTWPGVDFYQVYGMTEMSGVFCVL---DPADHRDVEHPERL-------------VSAGR 357
Query: 368 PAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
P P V +KV +G + VG T+ ML YWD+ G+ WL TGD G
Sbjct: 358 PLPGVTVKVVDPEGKTVAPGEVGEFWTQSEQHMLGYWDKPQETAETLVGDDWLRTGDAGH 417
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D G +++ R I +GGENVYP EVE V+++H + + V+G+ + + E V A +
Sbjct: 418 MDADGYLFISDRVKDMIITGGENVYPVEVERVVIEHDAVADVAVIGVPDTKWGESVKAVI 477
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
L + +E L HCR + L G+K P+ + P STG
Sbjct: 478 VLSPGAEVTEDE----------------LVAHCRAR-LAGYKVPKSVDIVPD-LPRNSTG 519
Query: 543 KIRRDEVRRE 552
KI + E+R+E
Sbjct: 520 KILKREIRKE 529
>gi|91228657|ref|ZP_01262572.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
gi|91187778|gb|EAS74095.1| putative long-chain-fatty-acid-CoA ligase [Vibrio alginolyticus
12G01]
Length = 513
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 157/560 (28%), Positives = 254/560 (45%), Gaps = 66/560 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K + I G +QF +A L+ G++ GD VAIS N+
Sbjct: 3 NLAAALQRNAASKPDKTALICGAEKINYEQFDAVAGKIAASLINKGVKPGDRVAISCPNN 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ----H 123
++ A+ G + PLN +E + + E + + +
Sbjct: 63 PFFAFVYYAIQKAGAVAVPLNVLLKAREIKYHLEDSKAKFYFCFEGTKELPMAKEGVKAF 122
Query: 124 TAIPSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+ + V L S + + N L A I ++ LP + +I +TSGT
Sbjct: 123 EQVDTCEGIVVLTQSQDESYWNGVITLNAFIA---DVQPLPDYIPRNADDTCVILYTSGT 179
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHV 241
TG PKG ++ +I+ +L I+G DD++L T PL H G + + A ++ GA V
Sbjct: 180 TGLPKGAELTQQNIIMNALVAQNIMGSQADDIHLVTLPLFHTFGQTVHLNASVLGGATLV 239
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+P+FE K LE VE+ VT VP + L + V+ + S++ ++GG LP+
Sbjct: 240 LVPRFEPKHVLELVEKRRVTIFAGVPTMYIGL---LHVQHQFD-TSSLRVAVSGGAPLPT 295
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+ + +F ++ YG++ETS F L + PG
Sbjct: 296 EIFRTFEETF-NVPILEGYGLSETSPIACFNHLDQERI--PG------------------ 334
Query: 362 GVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV--- 413
VG+P VE++V +G++ G I+ RG +VM Y D +P V+ +
Sbjct: 335 --SVGQPVQGVEVRVIDIEGNALPIGEEGEIVVRGHNVMKGYLD----RPEVTESALQNG 388
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W TGD+G D GN+++V R I GG NVYP E+E V + HP + + V+GI N
Sbjct: 389 WFHTGDVGRFDSSGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVSMVAVIGIPNEE 448
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E + A V L K KE + ++ L++ +E+ L FK PR +V R
Sbjct: 449 YGEEIKAYVVL---------------KPKE-YIDADSLQKWGKEQ-LASFKYPR-YVEIR 490
Query: 534 KPFPLTSTGKIRRDEVRREV 553
+ P+++TGKI + E++ E+
Sbjct: 491 EHLPMSATGKILKRELKSEL 510
>gi|389875794|ref|YP_006373529.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
gi|388530749|gb|AFK55945.1| AMP-dependent synthetase and ligase [Tistrella mobilis
KA081020-065]
Length = 557
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 166/557 (29%), Positives = 256/557 (45%), Gaps = 71/557 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+++V + N + +F + V LA GL+ +GL GD + I + N +EW+L A A
Sbjct: 37 DALVVVHQNVRWSWAEFDRRVTELAAGLIGLGLEPGDRIGIWSPNR---VEWVLIQFATA 93
Query: 79 FIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA----------- 125
G I+ +N YR E + ++ R ++L + + L A
Sbjct: 94 RAGLILVNINPAYRTFELEHALKLSGCRALVLAETFKTSRYVDMLLEVAPEFAEAGGRSA 153
Query: 126 -IPSLRWHVSLGSSSSDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+P L + + LG S + + AD +L ++ + P+ + I FTSGTT
Sbjct: 154 RLPDLEFVIPLGKSRGAMIGFETLTGFADAAARTTLDAI--IPTLRPDDPINIQFTSGTT 211
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 242
GSPKG ++H+ ++ L I+G+ E D PL H G+ S +A + GA VF
Sbjct: 212 GSPKGATLTHNNILNNGLFVGRIMGFTEADRLCIPVPLYHCFGMVLSVLACITHGATMVF 271
Query: 243 IPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ FE ++ LEAV+ T+L VP + L K +++ + G P
Sbjct: 272 PSEAFEPRATLEAVQAERCTALHGVPTMFITELALPDFKSF--DLSTLRTGIMAGAPCPI 329
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E M+E ++ YGMTETS ++F T D LET +
Sbjct: 330 ETMREVIAKMNMREVTICYGMTETSP-VSFQTRADADLETRTE----------------- 371
Query: 362 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTGEVW 414
VG P VE+++ DG V G + TRG VM YW D+ + +++ G W
Sbjct: 372 --TVGTIHPFVEVRIV-DGDDRVVPVGTVGELHTRGYSVMAGYWNDEARTRDAIAPGG-W 427
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+G ID+ G +VGR I GGEN+YP E+E L+ HPGI+ + V GIA+A+
Sbjct: 428 MRTGDLGVIDERGRCRIVGRSKDMILRGGENIYPVEIENFLITHPGILDVAVFGIADAKY 487
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A W N D SS + +L C E + FK PR + + +
Sbjct: 488 GEQVCA-------WIRRADNPDGSSLTEAAVLG------FC-EGRIAHFKIPRR-IRFVE 532
Query: 535 PFPLTSTGKIRRDEVRR 551
P+T TGKI++ +R+
Sbjct: 533 DMPMTVTGKIQKFLMRQ 549
>gi|28898738|ref|NP_798343.1| long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus RIMD
2210633]
gi|260877268|ref|ZP_05889623.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
gi|260897784|ref|ZP_05906280.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
Peru-466]
gi|28806956|dbj|BAC60227.1| putative long-chain-fatty-acid-CoA ligase [Vibrio parahaemolyticus
RIMD 2210633]
gi|308087611|gb|EFO37306.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus
Peru-466]
gi|308090297|gb|EFO39992.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus AN-5034]
Length = 513
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 255/569 (44%), Gaps = 84/569 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R A K N I G++ T +F +A +++ G++ GD VA+S N
Sbjct: 3 NLAAALQRNAVSKPNKTALICGDKKFTYAEFDAIAGKIATSMIKAGVKPGDRVALSCPNL 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT--- 124
++ AV G + PLN +E + ++S +Y + T
Sbjct: 63 PFFPFVYFAVQKAGAVTVPLNVLLKSREIKYHL----------EDSKAKFYFCFEGTPEL 112
Query: 125 --AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP---------EGA 173
A ++ + + + V +D + +L S F P +
Sbjct: 113 PMAKEGMKAFKEVDACETMIVMTQDQTQKEYQGLPTLTS--FIEDIEPLADYVARDADDT 170
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 232
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 171 CVILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNA 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++
Sbjct: 231 SVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVA 286
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 287 VSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG--------- 334
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 407
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 -----------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RPE 379
Query: 408 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 380 VTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMV 439
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 440 AVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFK 482
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR FV R+ P+++TGKI + E++ E+
Sbjct: 483 YPR-FVEIREQLPMSATGKILKRELKSEL 510
>gi|418461131|ref|ZP_13032210.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
gi|359738785|gb|EHK87666.1| AMP-binding domain protein [Saccharomonospora azurea SZMC 14600]
Length = 547
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 164/556 (29%), Positives = 248/556 (44%), Gaps = 70/556 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R+++V R T ++F DV LA GLL G+ GD V I A N EW L A
Sbjct: 37 DRDALVDHGSGRRWTYREFAADVDALALGLLSRGVAKGDRVGIWAPNCP---EWTLLQYA 93
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE----SSDSWYLELQHTAIPSLRWH 132
A +G I+ +N + E + +LV E S + + P LR
Sbjct: 94 SAKVGAILVNINPAYRSHELEYVLNQAGVSLLVAAETFKTSDYAGMIREVRPRCPVLRDV 153
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +GS+ D + + L S + + + I +TSGTTG PKG +S
Sbjct: 154 VLIGSADWDSLFGEPSAGNEALARVQA-------SLSADDPINIQYTSGTTGFPKGATLS 206
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ + Y E+D P H G+ +A GAC V P F+ ++
Sbjct: 207 HHNILNNGFFVGQLCDYTEEDRICLPVPFYHCFGMVMGNLAATSHGACMVIPAPAFDPRA 266
Query: 251 ALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEA 307
LEAV+ TSL VP + +A+LA ++ D S++ + G P E+MK+
Sbjct: 267 TLEAVQAERCTSLYGVPTMFIAELAV-----PGFEDYDLGSLRTGIMAGSPCPVEVMKQV 321
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+++ YGMTETS T T D ++E + VG+
Sbjct: 322 IERMGMSEVSICYGMTETSPVST-QTRKDDSIER-------------------RVSTVGR 361
Query: 368 PAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PH+E+KV + G + TRG VML YW+Q V W+ TGD+
Sbjct: 362 VGPHLEVKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEQPEKTAEVIDAARWMHTGDLA 421
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+DD G + + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++A
Sbjct: 422 VMDDDGYLSITGRIKDLVIRGGENVYPREIEEFLYSHPDILDAQVIGVPDAKYGEELMAW 481
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
VR+R+ + +++E LR+ C + L +K PR +V FP+T T
Sbjct: 482 VRMRDGAE---------------PVTAESLREFCTGR-LAHYKIPR-YVHVVDEFPMTVT 524
Query: 542 GKIRRDEVRREVMSHL 557
GKIR+ E+R + + L
Sbjct: 525 GKIRKVEMREKAVELL 540
>gi|359397207|ref|ZP_09190257.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
gi|357969001|gb|EHJ91450.1| Putative acyl-CoA synthetase yngI [Halomonas boliviensis LC1]
Length = 579
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 248/557 (44%), Gaps = 66/557 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
++++ + N H + +Q ++V AR LL IG+ GD VAI A N SEW L A A
Sbjct: 39 NDALIVLHQNIHWSYRQLHEEVNRCARALLSIGVDKGDRVAIWAPNCSEWTLTQ-FATAK 97
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES---SDSWYL--------------ELQ 122
IG I+ +N + E + LV+ +S SD + EL+
Sbjct: 98 IGAILVNINPSYRTHELEYVLNQSGARFLVSADSFKSSDYSAMLYELAPELKTSNKGELK 157
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+P L ++L S + + L + K + + A+ I +TSGT
Sbjct: 158 SQKLPDLECIINLSSEKLSGMWRWSDLMEEASKVSQTDVDDLQATLQFDDAINIQYTSGT 217
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHV 241
TG PKG +SH ++ +G+ +D + PL H G + + + GA +
Sbjct: 218 TGFPKGATLSHHNILNNGFFVAESMGFTSEDRLVIPVPLYHCFGMVMGNLGCITHGATMI 277
Query: 242 FIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+ + F+ L+AV T+L VP + +A L S++ + G P
Sbjct: 278 YPDEGFDPGKVLKAVHDQKATALYGVPTMF--IAELDHPDFPSTDLSSLRTGIMAGSICP 335
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+E+MK+ N + AYGMTETS T N +
Sbjct: 336 AEIMKQVINKMNMKGVQIAYGMTETSPVST--------------------QTGANDSIEK 375
Query: 361 QGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+ VG+ PH+E K+ G+ +G + TRG VML+YW+ A W
Sbjct: 376 RVSTVGRTQPHLENKIVDPGNGGILPRGEIGELCTRGYSVMLKYWNNDKATTEAIDEAGW 435
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+ ++D+ G + +VGR + GGENVYP+E+E L HP I + V G+ + +
Sbjct: 436 MHTGDLATMDEEGYIQIVGRIKDMVIRGGENVYPKEIEEFLYAHPAISEVQVTGVPDKKY 495
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E ++A V+L +S E ++ E LR++C+ K +T FK PR F +
Sbjct: 496 GEELIAWVKL-------------NSTAGE--VTGEELREYCKGK-ITHFKIPRYFKFVDE 539
Query: 535 PFPLTSTGKIRRDEVRR 551
FP+T TGKI++ ++R
Sbjct: 540 -FPMTVTGKIQKFKMRE 555
>gi|453363960|dbj|GAC80275.1| putative long-chain-fatty-acid--CoA ligase [Gordonia malaquae NBRC
108250]
Length = 505
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 147/521 (28%), Positives = 238/521 (45%), Gaps = 73/521 (14%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
+A L + GL+ GD VA+ N ++ + G + PLN ++ +E + +
Sbjct: 41 VATALRDRGLQPGDKVAVQVPNVPEFVYAYFGILRAGLTMVPLNPLFTAREMAYHLDDSD 100
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
+L+T S + +E A S V LG+ D D L L + PF
Sbjct: 101 TRLLITSVFSLAGAVEGAAEAGVSDVVVVPLGTELPDGSVAFDSL---------LDAPPF 151
Query: 165 T--HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 222
H + + ++ +TSGTTG PKG ++H L + + G DV + PL
Sbjct: 152 DDLHPTSADDTAVLLYTSGTTGRPKGAELTHYQLYMNCTVAPELFGMSASDVSIGVLPLF 211
Query: 223 HIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 281
H+ GLSS + A GA +P+F++ + ++ +E+ T VP + LA +
Sbjct: 212 HVFGLSSVLNATTRWGASVALLPRFDATAVIDEIERRRATVFAGVPTMYVALA-----EA 266
Query: 282 TWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 339
GRD +++ ++GG +P E++K F ++ YG++ET+S+ TF
Sbjct: 267 DATGRDLSTLRAAVSGGASIPGEVIKAVEAKFTGLVVLEGYGLSETASTTTF-------- 318
Query: 340 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGA 392
NV S + + + +GKP VE+KV D G+ +VG++L RG
Sbjct: 319 -----------NV---SATERKVLSIGKPVWGVEMKVIDDEGNALSAGTDNVGQLLVRGH 364
Query: 393 HVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPE 449
++M Y+ +P + + WL TGD+G DD G ++V R I GG NVYP
Sbjct: 365 NIMKGYY----KRPDATADALRNGWLHTGDLGYRDDEGYYFVVDRLKDMIVRGGYNVYPR 420
Query: 450 EVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSE 509
E+E VL HP ++ V+G + RL E VVA V +R+ SE++ +K +
Sbjct: 421 EIEEVLYSHPDVVEAAVIGTPDDRLGEEVVAYVAVRDGADLSEADVITFAKEQ------- 473
Query: 510 VLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L +K PR V++ P +TGKI + E+R
Sbjct: 474 ----------LAAYKYPR-SVVFVAELPKGATGKILKRELR 503
>gi|354612743|ref|ZP_09030685.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
gi|353222881|gb|EHB87176.1| Long-chain-fatty-acid--CoA ligase [Saccharomonospora
paurometabolica YIM 90007]
Length = 551
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 248/566 (43%), Gaps = 65/566 (11%)
Query: 9 ICQCLSRIAAVK--RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I L+R A R +VV + R T ++F +V +A GL ++G+ GD V I A N
Sbjct: 23 IGDNLARTVAAHGGREAVVDVATGRRWTYREFADEVDVVALGLADLGVTKGDRVGIWAPN 82
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES---SD-SWYL 119
EW + A A +G ++ +N + E + L+ S SD + +
Sbjct: 83 CP---EWTIVQYATARLGAVLVTINPAYRVHELEYVLRQAGIGTLIAARSHRTSDYAAMI 139
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
E P L V LG + + +R AD R + + + + I +T
Sbjct: 140 ERVRPDCPDLTDVVLLGEHGWEDLRRRGR-AAD-----RTRLADIAATLSADDPINIQYT 193
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 238
SGTTG PKG +SH ++ + + GY E D P H G+ +A GA
Sbjct: 194 SGTTGFPKGATLSHHNILNNGFSVGELCGYDETDRICLPVPFYHCFGMVMGNLAATSHGA 253
Query: 239 CHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
V P F+ + L AVE TSL VP + +A L S++ + G
Sbjct: 254 ATVIPAPAFDPAATLAAVEAERCTSLYGVPTMF--IAELALSGFDDYDLTSLRTGIMAGS 311
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P+E+M++ + A++ YGMTETS ++ T D TL+
Sbjct: 312 PCPAEVMRQIIDRMHMAEVSICYGMTETSP-VSVQTRRDDTLDR---------------- 354
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
+ VG+ PH+E+K+ + H G + TRG VML YWDQ V
Sbjct: 355 ---RVSTVGRVGPHLEIKIVDPATGLTVPRGHTGELCTRGYSVMLGYWDQPEQTAEVIDA 411
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD+ +DD G V + GR + GGEN+YP E+E L HP I+ V+G+ +
Sbjct: 412 ARWMHTGDLAVMDDEGYVAVTGRSKDMVIRGGENIYPREIEEFLHTHPDILDAQVIGVPD 471
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
R E ++A V+LR+ L++E LR+ C + L +K PR +V
Sbjct: 472 ERYGEELMAWVQLRDPAP---------------TLTAEALREFCAGR-LAHYKIPR-YVH 514
Query: 532 WRKPFPLTSTGKIRRDEVRREVMSHL 557
FP+T TGK+R+ +R + L
Sbjct: 515 VVDEFPMTVTGKVRKVAMRERAVELL 540
>gi|407803972|ref|ZP_11150802.1| AMP-dependent synthetase/ligase [Alcanivorax sp. W11-5]
gi|407022065|gb|EKE33822.1| AMP-dependent synthetase/ligase [Alcanivorax sp. W11-5]
Length = 518
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 148/553 (26%), Positives = 257/553 (46%), Gaps = 58/553 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + TI +R + ++ + LA L G++ GD V + ALNS
Sbjct: 2 YLTQGLHRAVQQFPDRLATIQDDRRTSYRELGERCARLAGALQRAGVKPGDRVGLLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+++ E+ L + G + P+N RWS +E ++ +L D++ L A
Sbjct: 62 DFHTEYFLGCWWAGAVCVPVNTRWSEQEIIYSLDDSDTALLFVDDAFAPMAASLLQGA-R 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG--AVIICFTSGTTGS 185
+L+ V LG + + + +TA G L P G I +T GTTG
Sbjct: 121 ALQTVVHLGQAETP-----EGVTA---FGDWLHEAPQVEDCRRGGDEMATILYTGGTTGF 172
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKGV++SH L ++A++A V L+ APL H L ++ +MV V +P
Sbjct: 173 PKGVMLSHRNLWSSAVARMAEGEPLRHHVSLYVAPLFHTASLGKLISQIMVAGTSVAVPA 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F + + + + + ++ VP+++ + L D +++I G + +++
Sbjct: 233 FRVEEVMALISRERINDVVLVPSMIQMM--LDHPAFADYDLDCLERITYGASPIALAVLE 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A +FPKA+ AYGMTET+ ++ ++ LP+A+ + S + G+CV
Sbjct: 291 RAMKAFPKAQFSHAYGMTETAPVISINPWFN-------HLPEAWESGIVRSAGR-AGLCV 342
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDT 417
E+++ + + V G ++ RG +VML YW KP + + W+ T
Sbjct: 343 -------EVRIVDEDDNEVPRGTVGEVIARGPNVMLGYWK----KPEATAEALRNGWMHT 391
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD G +D+ G +++V R I SGGENVY EVE +L +H + V+G+ + E
Sbjct: 392 GDGGYMDENGYLYIVDRIKDMIISGGENVYSAEVENILARHEAVQACAVIGVPSEAWGEA 451
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V RE + +++E L+ CRE L G+K P+ V + + P
Sbjct: 452 VHAVVVKREG----------------VSVTAETLQAFCRE-CLAGYKVPK-SVEFVEALP 493
Query: 538 LTSTGKIRRDEVR 550
++ GK+ + +R
Sbjct: 494 MSGPGKVLKHVLR 506
>gi|451346780|ref|YP_007445411.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
gi|449850538|gb|AGF27530.1| AMP-binding domain protein [Bacillus amyloliquefaciens IT-45]
Length = 546
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 250/558 (44%), Gaps = 82/558 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +F + A+GL+++G+ GD VAI A N +L A A IG ++ +N +
Sbjct: 36 TYAEFDRLCRQTAKGLMKLGIEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQI 95
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRW--HVSLGSSSSDFVNKRDMLT 150
E + S +++ D + Y+E+ + IP L+ H L S F+ + +
Sbjct: 96 AELDYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCEHGRLRSKRYPFL-RTVLYI 154
Query: 151 ADILKGYSLRSLPFTHSWA---PEGAVI-------------------ICFTSGTTGSPKG 188
D +S P H W EG + + +TSGTTG PKG
Sbjct: 155 GD-------KSPPGMHRWDSLLKEGEAVTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKG 207
Query: 189 VVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKF 246
V++SH IV + A IA + D P H G + +A + GA + I +F
Sbjct: 208 VMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVSAGAAMIPIEQF 266
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ L+ VEQ T+L VP + +A L + + V+ + G P+E+M+E
Sbjct: 267 SPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMAGSPCPAEVMRE 324
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ AYG TE S +T T D + E + G
Sbjct: 325 VIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE-------------------TAG 364
Query: 367 KPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+++ G+S G + TRG HVM Y+ A + WL TGD+
Sbjct: 365 RALPHIEVRIVRPGTSQEADRGEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTGDL 424
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
+D+ G + GR + GGEN+YP E+E +L +HP + + VVG+ + + E A
Sbjct: 425 AVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEAAA 484
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
VRL+E Q++ S+E +R C+E ++ +K PR +VL+ +P+T+
Sbjct: 485 WVRLKEG---------QTA-------SAEDIRTFCKE-HIARYKVPR-YVLFTDEYPMTA 526
Query: 541 TGKIRRDEVRREVMSHLK 558
+GKI++ ++R + + LK
Sbjct: 527 SGKIQKFKLREKTIEELK 544
>gi|357976483|ref|ZP_09140454.1| AMP-dependent synthetase and ligase [Sphingomonas sp. KC8]
Length = 485
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 232/522 (44%), Gaps = 66/522 (12%)
Query: 42 VLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT 101
V +A GL +GL GD +AI LN++ Y E LA GG+V PLN RWS E + +
Sbjct: 5 VARIAGGLAAMGLGQGDRIAILGLNNDRYFELFLAGPHAGGVVVPLNSRWSQAELADGLD 64
Query: 102 SIRPVMLVTDESSDSWYLELQH---TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYS 158
PV+L D++ +L L T P L +++G + D L A +
Sbjct: 65 DCEPVILAADDA----FLPLARLLATGRPGLHL-LAIGEDHPADIAHHDDLVAHAAIADA 119
Query: 159 LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDD-VYL 216
R+ + I +T GTTG KGV++SH ++ A IA GY DD VYL
Sbjct: 120 GRT--------GDDLFGIFYTGGTTGRSKGVMLSHRNVLRG--ANIAHCEGYYRDDAVYL 169
Query: 217 HTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL 276
AP H G +A+ V +P F++ +AL A+ +H T + VP ++ L +
Sbjct: 170 VAAPFFHASGNWPMIAITASAGTAVILPGFDAATALAAIARHRCTESLLVPTMVQML--I 227
Query: 277 IRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
T S + I+ G + L+ A + P + I AYGMTE S
Sbjct: 228 EHPDFTATDLSSFRTIVYGASPITEALLDRALAALPDTRFIQAYGMTELSPQCV------ 281
Query: 337 PTLETPGQLPQAF--GNVTPNSVHQPQG-VCVGKPAPHVELKVCSDGS-----SHVGRIL 388
LP G+ VH+ G C G VE+++ + VG I
Sbjct: 282 -------ALPHECLSGDYRARGVHRAGGRACYG-----VEMRIVDEDDKEVPRGQVGEIC 329
Query: 389 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG VML YW + + G W+ TGD G +D G V++V R I SGGENVY
Sbjct: 330 ARGESVMLGYWRRPDETAAALKGG-WMHTGDGGRMDAEGFVYVVDRVKDMIVSGGENVYS 388
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
EVE+ L HP + VV+G+ + R E V A V L + E++
Sbjct: 389 IEVESALSTHPAVRSCVVIGVPHERWIEQVHAIVILHDGAAAVEAD-------------- 434
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L H R++ L GFK PR +PFPL+ KI + E+R
Sbjct: 435 --LIDHVRQR-LAGFKVPRSVEFRTEPFPLSPANKILKREIR 473
>gi|375097374|ref|ZP_09743639.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374658107|gb|EHR52940.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 550
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 245/549 (44%), Gaps = 65/549 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+R+++V R T +Q +V LA GL G+ GD V I A N +EW + A A
Sbjct: 37 ERDALVEQFTGRTWTYEQLAAEVDALALGLANAGIGKGDRVGIWAPNCAEWTMTQ-YATA 95
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP---SLRWHVS 134
IG I+ +N + E + MLV ES S Y + P +LR V
Sbjct: 96 KIGAILVNINPAYRAHELEYVLNQSGITMLVAAESFKTSDYAGMIEEVRPRCEALRHVVL 155
Query: 135 LGSS--SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
LGS ++ F + R AD LR+ + + + + I +TSGTTG PKG +S
Sbjct: 156 LGSGEWNALFEHGRQ---ADPALLERLRA-----TLSADDPINIQYTSGTTGFPKGATLS 207
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK--FESK 249
H ++ + GY E D P H G+ +A GAC V IP FE
Sbjct: 208 HHNILNNGFFVGELCGYTEADRICIPVPFYHCFGMVMGNLAATSHGACMV-IPAQAFEPA 266
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AV+ TSL VP + +A L S++ + G P E+MK+
Sbjct: 267 ATLRAVQAQRCTSLYGVPTMF--IAELAEADFDSYDLSSLRTGIMAGSPCPVEVMKQVIE 324
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
A++ YGMTETS T T D ++E + VG+
Sbjct: 325 RMGMAEVTICYGMTETSPVST-QTRADDSIER-------------------RVSTVGRVH 364
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+K+ + G TRG VML YW+Q W+ TGD+ +
Sbjct: 365 PHLEVKIVDPETGLTVPRGTPGEFCTRGYSVMLGYWEQPEQTADAIDAARWMHTGDLAVM 424
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G V + GR + GGEN+YP E+E L HP ++ V+G+ + R E ++A VR
Sbjct: 425 DDEGYVNITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIGVPDRRYGEELMAWVR 484
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
+RE L++E LR+ C+ + L +K PR +V + FP+T TGK
Sbjct: 485 MREGAP---------------PLTAEALREFCQGR-LAHYKIPR-YVHVVEEFPMTVTGK 527
Query: 544 IRRDEVRRE 552
+R+ E+R +
Sbjct: 528 VRKVEMREK 536
>gi|288555267|ref|YP_003427202.1| acetylCoA synthase AMP-binding subunit [Bacillus pseudofirmus OF4]
gi|288546427|gb|ADC50310.1| acetylCoA synthase, AMP-binding domain protein [Bacillus
pseudofirmus OF4]
Length = 548
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 257/579 (44%), Gaps = 78/579 (13%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNR--HNTGQQFVQDVLNLARGLLEIGLRSGDIVAIS 63
Q I + L +A + + + +R T QQF ++ A+GL+ +G+ G+ VAI
Sbjct: 5 QVPIGKLLEDVAKRQPDHEAVVYSDRGLRYTYQQFDEECRKAAKGLMALGIERGEHVAIW 64
Query: 64 ALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQ 122
+ N +L A +G ++ +N + E + S +++ D+ D+ Y+E+
Sbjct: 65 STNKPEWLTSQFATGKMGAVLVTVNTNYRTSELEYLLKQSDATTLILMDQFRDASYIEML 124
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP------------ 170
+ +P L+ SS ++++ + P ++W
Sbjct: 125 YEIVPELKLAERGNLQSSKLPKLKNIIF------LGEEAYPDMYTWGELIELGKKVTDAE 178
Query: 171 ----------EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAP 220
+ + + +TSGTTG PKGV+++H L ++ + D P
Sbjct: 179 LDARMDSLDKDDVINMQYTSGTTGFPKGVMLTHYNLANNAVNIAGCMNLTNKDRLCIPVP 238
Query: 221 LCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 279
H G + +A + VGA V + +F K+ LEAV + T L VP + + L
Sbjct: 239 FFHCFGCVLGTLACVSVGATMVPVEEFSPKAVLEAVSKEKCTGLHGVPTMF--IGELNDP 296
Query: 280 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 339
S++ + G P E+MK + +++ AYG TE+S +T + DP +
Sbjct: 297 DFDTYDLSSLRTGIMAGSNCPIEVMKAVVDKMGASEITIAYGQTESSPVITQTRVDDPLM 356
Query: 340 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAH 393
+ VG+ P+VE+K+ G++ G + TRG H
Sbjct: 357 --------------------LRVESVGRALPNVEVKIVEPGTNDEVPRGVQGELCTRGYH 396
Query: 394 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 453
VM Y+ A + T + WL TGD+ +D+ G + GR I GGEN+YP E+E
Sbjct: 397 VMKGYYKNPEATKAAITEDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEE 456
Query: 454 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 513
L QHP ++ + VVGI + + E V A ++L+E ES +++ LR+
Sbjct: 457 FLYQHPKVLDVQVVGIPDEKYGEEVSAWIKLKE----GEST------------TADELRK 500
Query: 514 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
C K + +K PR ++ + +P+T++GKI++ ++R++
Sbjct: 501 DCMGK-IAAYKIPR-YIAFVDEYPMTASGKIQKFKLRQQ 537
>gi|404443308|ref|ZP_11008479.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
gi|403655602|gb|EJZ10449.1| AMP-dependent synthetase and ligase [Mycobacterium vaccae ATCC
25954]
Length = 515
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 256/562 (45%), Gaps = 77/562 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R A + TI G R T Q LA +G+ + D VA+ A N+
Sbjct: 2 YLTQALHRAVAQTPDLPATIFGERIRTWAQSADRAARLAAAFHGLGVATDDRVALLAQNN 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ Y +++ AV + + P+N RWS E + ++ V+LV D++ +L++ +
Sbjct: 62 DAYHDFLFAVPWADAVAVPVNTRWSVHEIAFSLEDAGAVVLVVDDA----FLDM----VD 113
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA------VIICFTSG 181
LR L + +++ D D + G+ + H P+ I +T G
Sbjct: 114 DLR---VLAPTVRSYIHTGDRPRPDGVLGFE--EIIAAHDPVPDARRGGDALAAIYYTGG 168
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
TTG+PKGV++SH+ L+ +L +A + LH+AP+ H+ S +A +VG H
Sbjct: 169 TTGTPKGVMLSHANLMAAALGALATGQFLAPRGRLLHSAPMFHLADGSGWLARNVVGGSH 228
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR---DSVKKILNGGG 297
V +P F +S EA+E H +T + P ++ + V R S+K ++ G
Sbjct: 229 VILPGFTPESVAEAIEHHQITDMFLAPTMIQ-----MFVDSPAAARHDLSSLKHLIYGAS 283
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL---YDPTLETPGQLPQAFGNVTP 354
+ +++ A P+AKL+ AYGMTE + + T +T DP L
Sbjct: 284 PISQAVLERAMRLLPQAKLLQAYGMTELAPTTTVLTAEEHLDPALLR------------- 330
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 409
G+ P E+K+ + + V G + RG HVML YW++
Sbjct: 331 ---------SAGRAVPIAEVKIVDEDGNEVPRGTVGEVAARGPHVMLGYWNRPEETAQAL 381
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
G W+ TGD G +DD G +++V R I +GGENVY EVE L QHP + V+G+
Sbjct: 382 RGG-WMHTGDGGYLDDNGYLFIVDRIKDMIVTGGENVYSAEVENALAQHPSVATCAVIGV 440
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+A E V A V L + ++E LR+HC + +KAPR
Sbjct: 441 PDADWGERVHAVVVLHDG----------------ATTTAEELREHCGSL-IARYKAPRT- 482
Query: 530 VLWRKPFPLTSTGKIRRDEVRR 551
V + PLT+ K+ + ++R+
Sbjct: 483 VDFVDALPLTAAAKVSKVDLRK 504
>gi|394994435|ref|ZP_10387152.1| AMP-binding domain protein [Bacillus sp. 916]
gi|393804698|gb|EJD66100.1| AMP-binding domain protein [Bacillus sp. 916]
Length = 546
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 156/582 (26%), Positives = 256/582 (43%), Gaps = 86/582 (14%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R A + R +VV T +F + +A+GL+++G+ GD VAI A N +
Sbjct: 13 LERTAELFPDREAVVYPERGLRYTYAEFDRLCRQIAKGLMKLGVEKGDHVAIWASNIPEW 72
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL 129
L A A IG ++ +N + E + S +++ D + Y+E+ + IP L
Sbjct: 73 LAAQFATAKIGAVLVTINTNFQIAELDYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPEL 132
Query: 130 RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW--------------------- 168
+ +KR +L +SLP H W
Sbjct: 133 K-----TCERGRLRSKRYPFLRTVLY-IGDKSLPGMHRWDSLLDNAEAVTDAALDGRMDS 186
Query: 169 -APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IG 225
+ + + +TSGTTG PKGV++SH IV + A IA + D P H G
Sbjct: 187 LKKDDCIHMQYTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSCDRLCIPVPFFHCFG 245
Query: 226 GLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 285
+ +A + GA + I +F + L+ VEQ T+L VP + +A L + +
Sbjct: 246 CVLGVLACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYD 303
Query: 286 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP---TLETP 342
V+ + G P+E+M+E + AYG TE S +T DP +ET
Sbjct: 304 LSHVRTGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVITQTRTDDPFERRVETA 363
Query: 343 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVML 396
G C PH+E+++ G+S G + TRG HVM
Sbjct: 364 G--------------------CA---LPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMK 400
Query: 397 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 456
Y+ A + WL TGD+ +D+ G + GR + GGEN+YP E+E +L
Sbjct: 401 GYYKNQEATEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLY 460
Query: 457 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 516
+HP + + VVG+ + + E A +RL++ Q++ S+E +R C+
Sbjct: 461 RHPAVADVQVVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCK 504
Query: 517 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
E ++ +K PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 505 E-HIARYKVPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|424853672|ref|ZP_18278030.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663719|gb|EHI43812.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 517
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 252/557 (45%), Gaps = 62/557 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + + + G+R T + + + LA L +G+ GD + I A NS
Sbjct: 2 YLTQGLHRSVSRCPDKIALVNGDRQFTHTELIDRIGRLAAALAGLGVAEGDRIGILATNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+E+ LA + G ++AP+N RWS E + + +L+TDE++ LEL+
Sbjct: 62 AEYVEYALACPWGGFVLAPINNRWSLTEMAYQVDDAEITVLITDEAALPQALELRDEC-S 120
Query: 128 SLRWHVSLGSSS--SDFVNKRDMLTADILKGYSLRSLPFT-HSWAPEGAVIICFTSGTTG 184
+L V G++ ++ D++ A S P A + I +T GTTG
Sbjct: 121 TLASVVCYGAAQLPDGCLDYEDLIAA---------STPMADRRLAGDSLAAILYTGGTTG 171
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
PKGV++ ++V + + G + +LH +PL H+ L+ +M+G+ +
Sbjct: 172 VPKGVMLGPGQIMVSGMGSLVSAGLPNLPERFLHVSPLYHMAALAGIYQQVMLGSTQYVL 231
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
+F+ +E+ +T+ VP ++ L TLI + T S+ + G + +
Sbjct: 232 GEFDVHRLAATIERERITATTLVPTMIQRLLTLI--ETTGADLSSLIHLGYGASPISETV 289
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+++A P ++ YGMTE T +T P ++T H +
Sbjct: 290 LRQALRLLPHLQMCQRYGMTELGPVATLLT------------PADHRDIT----HPQRLR 333
Query: 364 CVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WL 415
G+ A H E++V + S VG ++ RG ++ML YW KP+ + + W+
Sbjct: 334 SAGRAAMHTEVRVVGEDSREMPVGQVGEVVVRGGNIMLGYWK----KPAETAHALRGGWM 389
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G DD G +++V R I +GGENVY EVE+VL H + V+G+ +
Sbjct: 390 HTGDMGYFDDDGYLYVVDRLKDMIVTGGENVYSAEVESVLSLHESVSSCAVIGVPDPDWG 449
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A V L + S LR+ C + + +KAPR V +
Sbjct: 450 ERVHAVVVLAPGHETDAST----------------LREFC-SQYIARYKAPRT-VEFVPA 491
Query: 536 FPLTSTGKIRRDEVRRE 552
PL+ GKI + +R +
Sbjct: 492 LPLSPVGKILKRTLREQ 508
>gi|419961160|ref|ZP_14477169.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
gi|414573481|gb|EKT84165.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus M213]
Length = 530
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 242/520 (46%), Gaps = 67/520 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA L G+ GD V + LN + E +LAV +G I P+N+R + E + I
Sbjct: 55 LAGALSRRGVNFGDRVLLLTLNRTEFFEAVLAVNALGAIAVPVNFRLTPPEVA-FIARDS 113
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
V E + + + +P L V++G+ S V + L ++ Y+ LP
Sbjct: 114 GARAVFTEPALAPLVAAVRQDVPELSLVVNIGADSEAGVLGYEELVSEAGPAYAPVDLP- 172
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCH 223
+ +I +TSGTTG+PKG V+SHS ++ QS+ I + Y DD+ +P+ H
Sbjct: 173 -----EDTPSLILYTSGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFH 227
Query: 224 IGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLI 277
+ L S MLM+G V P F L+ EQ +T++ VP A+ AD
Sbjct: 228 VAALGSVAPMLMLGGTTVIHPLKAFNPAEMLDVWEQERITTVFLVPVQWQAVCAD----- 282
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
T +GRD ++++ G S+ +++ ++FP+A +++ +G TE S +T + D
Sbjct: 283 ---PTVRGRDLALRVISWGAAPASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGD 338
Query: 337 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRG 391
+ G VGKP P ++ +V D + V G I+ RG
Sbjct: 339 DAIRKLG--------------------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRG 378
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
+ML YW Q A + + G W +GD+ DD G V++V R+ I SGGEN+Y EV
Sbjct: 379 PTMMLEYW-QNPAATADAFGGGWFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEV 437
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL HP I VVG + + TE+ VA V L D+ S L+ E L
Sbjct: 438 ENVLFGHPRIREAAVVGRPDPKWTEVPVAVVALD----------DEGSD-----LTVEEL 482
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K L +K P+ V+ P ++GK+ + E+R+
Sbjct: 483 AAWLDDK-LARYKHPKDVVI-VDALPRNASGKVVKGELRK 520
>gi|418049143|ref|ZP_12687230.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
gi|353190048|gb|EHB55558.1| o-succinylbenzoate--CoA ligase., 4-coumarate--CoA ligase
[Mycobacterium rhodesiae JS60]
Length = 1045
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 240/552 (43%), Gaps = 61/552 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFI 80
+++V + R T + ++ +LAR L+ G+ GD V I A N +EW L A A +
Sbjct: 539 DALVDVAAGRRWTYAELNHEIDSLARALMSSGIDKGDRVGIWAPNCAEWTL-LQYATAKV 597
Query: 81 GGIVAPLNYRWSFKEASRAI--TSIRPVMLVTD-ESSDSWYLELQ-HTAIPSLRWHVSLG 136
G I+ +N + E + + +R ++ TD +SSD + + +P L V L
Sbjct: 598 GAILVTINPAYRTHELAYVLRHAGVRMLVSATDFKSSDYRSMVAEVRPEVPDLSDVVFLN 657
Query: 137 SSSSDFVNKR-DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
S + +R + +AD L+ R + S P + I +TSGTTGSPKG V+SH
Sbjct: 658 SPDWHALRQRSEQTSADDLR----RRM---ESLTPSDPINIQYTSGTTGSPKGAVLSHRN 710
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALE 253
++ ++ +G D P H G+ + IP F+ + L
Sbjct: 711 ILNNGFFVTDLINFGPGDRLCIPVPFYHCFGMVMGNLGCTTHGATMVIPAAGFDPGATLA 770
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AVEQ T+L VP + +A L + S++ + G P E+MK
Sbjct: 771 AVEQERCTALYGVPTMF--IAMLGHSDLAHRDVSSLRTGIMAGAPCPVEIMKRCLEQLNM 828
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ AYGMTETS ++ TL D LE + VG+ PHVE
Sbjct: 829 SEVSIAYGMTETSP-VSCQTLIDDDLER-------------------RTATVGRAHPHVE 868
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+KV + + G TRG VML YW+ E W+ TGD+ + D G
Sbjct: 869 IKVVDPETGALVERGTTGEFCTRGYSVMLGYWNDEAKTAEAIDDEGWMHTGDLAVMRDDG 928
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+VGR + GGENVYP E+E L HP I + V+G+ + R E + A V++R
Sbjct: 929 YCQIVGRIKDMVIRGGENVYPREIEEFLYTHPDIDDVQVIGVPDPRYGEEICAWVKMRAG 988
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
Q L +K PR +V FP+T TGK+R+
Sbjct: 989 ----------------AAPLDAAAVQEFAAGKLAHYKIPR-YVRVVDDFPMTVTGKVRKV 1031
Query: 548 EVRREVMSHLKS 559
E+R E++ L S
Sbjct: 1032 EMRAEMIRLLDS 1043
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 151/558 (27%), Positives = 244/558 (43%), Gaps = 83/558 (14%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ L+R A V+ ++V NR T +Q V LA L + G+ GD VA+ LNS
Sbjct: 11 LSDTLARHARVRPDAVAFADPNRRATFEQTDIRVTRLANALAQRGIGRGDRVAVLGLNSL 70
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
+E A +G +V PLN+R LV DE + +
Sbjct: 71 ELVETWFATLRLGAVVVPLNFR-----------------LVADEIAYLMADSGAAALVVD 113
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL-------PFTHSWAPEGAVIICFTSG 181
S+GS+ S + + G +L S P + I +TSG
Sbjct: 114 AALAPSVGSAES--------VHTTLTIGGTLESAIDGAGAEPVDVPVSDNDPAFIMYTSG 165
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
TTG PKG V+SH L + + + I +G+ +DD +L APL H G+S + + G
Sbjct: 166 TTGFPKGAVLSHRNLYLHAFSSIGTLGHRADDDCWLGVAPLFHTAGVSGMLPAFLTGG-K 224
Query: 241 VFIPK---FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
V IP F++++A+ + VTS PA + + R+ + W +++I G
Sbjct: 225 VVIPSSGGFDAEAAVRTIVAERVTSCWMTPAQWQIVCAMDRLAE-WD-LSCLRRIWWGAA 282
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+ L++ T+ FP A++I+A+G TE S +T + D + G
Sbjct: 283 PASTTLLRNMTDVFPGAEIIAAFGQTE-CSPITCLLRGDDAMAKIGS------------- 328
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 412
VG P +VE ++ D + V G I+ +G VM YW++ G
Sbjct: 329 -------VGTPMLNVEARIVDDDMNDVVPGIVGEIVYQGPLVMAGYWNKPAETAEAFRGG 381
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W +GD+ D+ G +++V R+ I SGGEN+Y EVE VL HP I + V+G+ +
Sbjct: 382 -WFHSGDLVRQDEDGYIYVVDRKKDMIISGGENIYSAEVENVLAAHPKIAEVAVIGVPDP 440
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E +A + R+ D S ++ + HCRE+ L +K PR +
Sbjct: 441 KWGETPLAVIVPRDP-------ADPPSADE--------IESHCRER-LAAYKRPRRVAIV 484
Query: 533 RKPFPLTSTGKIRRDEVR 550
+ P ++GK+ + +R
Sbjct: 485 -EALPRNASGKVLKTVLR 501
>gi|154686271|ref|YP_001421432.1| AMP-binding protein [Bacillus amyloliquefaciens FZB42]
gi|42491132|emb|CAE11269.1| YngI protein [Bacillus amyloliquefaciens FZB42]
gi|154352122|gb|ABS74201.1| YngI [Bacillus amyloliquefaciens FZB42]
Length = 546
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 155/577 (26%), Positives = 260/577 (45%), Gaps = 72/577 (12%)
Query: 11 QCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ L R A + R +VV T +F + A+GL+++G+ GD VAI A N
Sbjct: 11 KLLERTAELFPDREAVVYPERGLRYTYAEFDRLCRQTAKGLMKLGVEKGDHVAIWASNIP 70
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIP 127
+L A A IG ++ +N + E + S +++ D + Y+E+ + IP
Sbjct: 71 EWLAAQFATAKIGAVLVTINTNFQIAELDYLLAHSDVSALIIMDSYRQTSYVEIVNKLIP 130
Query: 128 SL----------------RWHVSLGSSSSDFVNKRDML--TADILKGYSLRSLPFTHSWA 169
L R + +G S +++ D L A+ + +L S
Sbjct: 131 ELKTCERGRLRSKRYPFLRTVLYIGDKSPPGMHRWDSLLDNAEAVTDATLDGR--MDSLK 188
Query: 170 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGL 227
+ + + +TSGTTG PKGV++SH IV + A IA + D P H G +
Sbjct: 189 KDDCIHMQYTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCV 247
Query: 228 SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 287
+A + GA + I +F + L+ VEQ T+L VP + +A L + +
Sbjct: 248 LGVLACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLS 305
Query: 288 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 347
V+ + G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 306 HVRTGIMAGSPCPAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE--- 361
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ 401
G+ PH+E+++ G+S G + TRG HVM Y+
Sbjct: 362 ----------------TAGRALPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMKGYYKN 405
Query: 402 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
A + WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP +
Sbjct: 406 QEATEEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAV 465
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
+ VVG+ + + E A VRL++ Q++ S+E +R C+E ++
Sbjct: 466 ADVQVVGVPDPKYGEEAAAWVRLKDG---------QTA-------SAEDIRTFCKE-HIA 508
Query: 522 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
+K PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 509 RYKVPR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|103487349|ref|YP_616910.1| long-chain-fatty-acid--CoA ligase [Sphingopyxis alaskensis RB2256]
gi|98977426|gb|ABF53577.1| AMP-dependent synthetase and ligase [Sphingopyxis alaskensis
RB2256]
Length = 519
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 242/560 (43%), Gaps = 85/560 (15%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
Q L+ AA + + V +R + +A LL GL GD VA NS+ Y
Sbjct: 13 QFLTHWAAERPDRVALREEDRVYSHGDLDDLTARVASALLGAGLNKGDRVAWIGKNSDLY 72
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES----SDSWYLELQHTAI 126
A G ++AP+ +R S E + + R M+ +D L+H
Sbjct: 73 FILFYGAARAGIVMAPVGWRLSPAEWAFIVNDTRAKMVFAGPGFEGLADQLAGRLEH--- 129
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA---VIICFTSGTT 183
D + D K +++ ++ P GA V+ +TSGTT
Sbjct: 130 --------------------DPVIVDAAKAWAMIEGAARTAFDPSGANDAVLQLYTSGTT 169
Query: 184 GSPKGVVISHSALIV----QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
G+PKG V+S+ L S + + +D+ L P HIGG + L G
Sbjct: 170 GNPKGAVLSNRNLFALRKHSSTLDLPYTRWDDDEAVLVAMPCAHIGGTGLGIMALAAGLP 229
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
+ + +F + +AVEQH VT VPA + L L+ + T +K IL G +
Sbjct: 230 GIVLAEFNPEGVFDAVEQHGVTRFFMVPAALQML--LMHPRCTSVDYSRLKYILYGAAPI 287
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P EL+++ F A+ I AYGMTET+ +++ + P H
Sbjct: 288 PLELLRQCIQVF-GAQFIQAYGMTETTGTISML---------------------PPEDHD 325
Query: 360 PQG----VCVGKPAPHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLAKPSVST 410
P G GK P VE++V +DG + VG ++TR ++ ML YW+ A + T
Sbjct: 326 PAGNKRMRSAGKALPGVEIRVVDADGNPLPTGEVGEVVTRSSNNMLGYWNLPDATANTMT 385
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
+ W+ TGD G +D+ G +++ R I +GGENVYP EVE+ + HP + + V+GI
Sbjct: 386 DDGWIRTGDAGYLDEDGYLFIHDRMKDMIITGGENVYPAEVESAIFGHPAVQEVAVIGIP 445
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+A+ E V A V + + E++ + RE+ + FK PR
Sbjct: 446 DAKWGESVKAVVVAKPGARIEEAD----------------IIAWARER-IAPFKCPRSID 488
Query: 531 LWRKPFPLTSTGKIRRDEVR 550
+ P ++GKI R ++R
Sbjct: 489 VI-DALPRNASGKILRKDLR 507
>gi|260363738|ref|ZP_05776514.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus K5030]
gi|308114927|gb|EFO52467.1| long-chain-fatty-acid--CoA ligase [Vibrio parahaemolyticus K5030]
Length = 513
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 255/569 (44%), Gaps = 84/569 (14%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R A K N I G++ T +F +A +++ G++ GD VA+S N
Sbjct: 3 NLAAALQRNAVSKPNKTALICGDKKFTYAEFDAIAGKIATSMIKAGVKPGDRVALSCPNL 62
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT--- 124
++ AV G + PLN +E + ++S +Y + T
Sbjct: 63 PFFPFVYFAVQKAGAVTVPLNVLLKSREIKYHL----------EDSKAKFYFCFEGTPEL 112
Query: 125 --AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP---------EGA 173
A ++ + + + V +D + +L S F P +
Sbjct: 113 PMAKEGMKAFKEVDACETMIVMTQDQTQKEYQGLPTLTS--FIEDIEPLADYVARDADDT 170
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-A 232
+I +TSGTTG PKG ++ +++ +L I+ DDV+L T PL H G + + A
Sbjct: 171 CVILYTSGTTGLPKGAELTQQNIVMNALVAQNIMASQADDVHLVTLPLFHTFGQTVHLNA 230
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
+ GA V +P+F+ K LE +E+H VT VP + L + V+ S++
Sbjct: 231 SVQSGATLVLVPRFDPKHVLELIEKHRVTLFAGVPTMYIGL---LHVEHNCD-ISSLRVA 286
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
++GG LP+E+ K F ++ YG++ETS F L + PG
Sbjct: 287 VSGGSSLPTEVFKTFEARF-NVPILEGYGLSETSPIACFNHLDQERV--PG--------- 334
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPS 407
VG+P VE+KV DG + G I+ RG +VM Y D +P
Sbjct: 335 -----------SVGQPIQGVEVKVVDLDGHTLPVGEEGEIIVRGHNVMKGYLD----RPE 379
Query: 408 VSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
V+ + W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + +
Sbjct: 380 VTESVLQSGWFHTGDVGRFDESGNLFIVDRMKDLIIRGGFNVYPREIEEVFMTHPAVAMV 439
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
V+GI + E + A V L+ + Q+ E++ EL L RE+ L FK
Sbjct: 440 AVIGIPHQEYGEEIKAYVVLKPN-QFVEAD--------ELQLWG-------REQ-LANFK 482
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEVRREV 553
P+ FV R+ P+++TGKI + E++ E+
Sbjct: 483 YPK-FVEIREQLPMSATGKILKRELKSEL 510
>gi|365155083|ref|ZP_09351476.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
gi|363628799|gb|EHL79508.1| hypothetical protein HMPREF1015_01128 [Bacillus smithii 7_3_47FAA]
Length = 546
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 242/548 (44%), Gaps = 84/548 (15%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWS------------ 92
+A+GL+ +G+ GD +A+ N+ ++ A +GG++ +N +
Sbjct: 47 VAKGLMALGVEKGDHLAVWTTNTPEWVALQFATGKMGGVLVTVNTNYRTMELEYLLKQSD 106
Query: 93 -----FKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS-------S 140
E R I+ + + + E S ELQ +P L+ + L S
Sbjct: 107 AKTLILIEGYRGISYVDTIYEICPELRHSQPGELQSKRLPLLKNVIVLSEKPYSGMYNWS 166
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
+ K ++ LK S RSL P+ + + +TSGTTG PKGV+++H L+ +
Sbjct: 167 QLIEKGKRISDQELKARS-RSL------HPDDVINMQYTSGTTGFPKGVMLTHYNLVNNA 219
Query: 201 LAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHC 259
+ +DD P H G + +A + VGA V + +F+ ++ L+ VE+
Sbjct: 220 RNIAECMKLTKDDRLCIPVPFFHCFGCVIGTLASVSVGATMVPVQEFDPEAVLQTVEKEK 279
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 319
T+L VP + ++ L + +++ + G P E+MK +
Sbjct: 280 CTALHGVPTMF--ISELNHSNFSKYNLTTLRTGVMAGSNCPMEVMKAVMEKMGMKDITIC 337
Query: 320 YGMTETSSSLTFMTLYDPT---LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
YG TE+S +T DP +ET VGK PHVE+K+
Sbjct: 338 YGQTESSPVITQSRTDDPVSLRVET-----------------------VGKALPHVEVKI 374
Query: 377 CSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
GS+ V G + TRG HVM Y+ A V + WL TGD+ +D+ G V
Sbjct: 375 VEPGSNRVLPPNTQGELCTRGYHVMKGYYKNPEATKEVIDEDHWLHTGDLAVMDENGYVR 434
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ GR I GGEN+YP E+E L QHP I+ + VVG+ + + E V A + L+E
Sbjct: 435 ITGRLKDMIIRGGENIYPREIEEFLYQHPKILDVQVVGVPDEKFGEEVGAWIILKEGET- 493
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+E +R C+ K ++ K P+ +V + +P+T++GKI++ ++R
Sbjct: 494 ---------------ADAEEIRAFCKGK-ISRHKVPK-YVFFTDEYPMTASGKIQKFKLR 536
Query: 551 REVMSHLK 558
+ +K
Sbjct: 537 ERYLEDIK 544
>gi|453050271|gb|EME97816.1| AMP-binding domain protein [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 543
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 250/564 (44%), Gaps = 59/564 (10%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I L+R A+ R ++V + G R T F + V +A GLL G+ GD V I A+N
Sbjct: 20 IGTSLTRSVALFGDREALVDVQGGRRWTYAAFGRAVEEVALGLLAKGVAQGDRVGIWAVN 79
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL-ELQ 122
++ A A IG I+ +N + E S + +LV+ ++SD + E
Sbjct: 80 CPEWMIVQYATARIGAIMVNINPAYRVHELSYVLRQSGVSVLVSATAYKTSDYRRMVEQV 139
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
P+LR V L S+ + + T R + PE V I +TSGT
Sbjct: 140 RGDCPALRDVVYLDDSTWTGLVRLGAGTP------RERLAEREAALRPEDPVNIQYTSGT 193
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TG KG +SH ++ +GY E+D P H G+ +A GAC V
Sbjct: 194 TGFAKGATLSHRNILNNGYFVGETLGYTEEDRIALPVPFYHCFGMVMGNLAATTHGACVV 253
Query: 242 F-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
P F+ + L AVE+ TSL VP + +A L S++ + G P
Sbjct: 254 IPAPVFDPTATLHAVERERCTSLYGVPTMF--IAELDLPDFATYDLSSLRTGIMAGSPCP 311
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+E+MK ++ YGMTETS T D L + G V
Sbjct: 312 AEVMKRVVAEMHMEEVTICYGMTETSPVSTQTRRED-------DLDRRTGTV-------- 356
Query: 361 QGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
G+ PH+E+K+ + G + TRG VML YW++ + W
Sbjct: 357 -----GRVLPHIEVKIVDPETGATVPRGEHGELCTRGYSVMLGYWNEPERTAEAIDADRW 411
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+ +D+ G V +VGR I GGENVYP E+E L HP I + V+G+ + R+
Sbjct: 412 MHTGDLAVMDEEGYVRIVGRSKDMIIRGGENVYPREIEEFLHTHPKIADVQVIGVPDDRM 471
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E ++ACV L + LS + L ++CR + L +K PR ++ +
Sbjct: 472 GEEIMACVILHDDAGG---------------LSRDELARYCRGR-LAHYKVPR-YLRVME 514
Query: 535 PFPLTSTGKIRRDEVRREVMSHLK 558
FP+T +GK+R+ E+R E ++ L+
Sbjct: 515 SFPMTVSGKVRKVELREEAVALLE 538
>gi|298714511|emb|CBJ27533.1| Acyl-CoA Synthase, 2,3-dihydroxybenzoyl)adenylate synthase
[Ectocarpus siliculosus]
Length = 623
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 194/398 (48%), Gaps = 37/398 (9%)
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
I +TSG+TG KGV ++H + Q+ AK +G+ YL+ PL H+GG+S+A+A+ +
Sbjct: 237 IVYTSGSTGRSKGVALTHEGQVFQADAKCVQLGFTSSTTYLNVLPLFHVGGVSAALAVTL 296
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-----SVK 290
VG CHVF+P+F A+ A++ V S++ VP ++ L + + +V
Sbjct: 297 VGGCHVFVPRFAPGCAIAAIQAGRVNSIVVVPTMLHMLVKEASSESSTSDDTANPLAAVD 356
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ--- 347
++ GG + L + A P ++ + Y TE S++ F + P+L + P
Sbjct: 357 TVVVGGQPMSGRLERLARGCMPGSRFVQTYACTEAGSTIAFA--FSPSLGASQRDPNGGC 414
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------------VGRILTRGAHVM 395
+ P H+ G PA HVE++V GSS VG + TRG HVM
Sbjct: 415 GTKSTVPERAHELWAT-AGSPAEHVEIRVVERGSSDGPHPASPASAGTVGEVETRGPHVM 473
Query: 396 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDD-GGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
YW++ + WL TGD+G +D+ G + +VGR IK+GGE V+ EVE+V
Sbjct: 474 KGYWNRPDLTSEAIRPDGWLRTGDLGRLDETSGRLMIVGRAKDVIKTGGEKVHSSEVESV 533
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES--NCDQSSKNKELLLSSEVLR 512
LL+H + G+ + RL E V A V L ++ Q + CD++ VL
Sbjct: 534 LLRHVWVAEAAAYGVDDERLGEKVAASVVLDDAAQDDDGPITCDRARA---------VLD 584
Query: 513 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ C +L+ +K PR + P S GK+ R +R
Sbjct: 585 RFC-GLHLSPYKRPRQIHVV-PALPRNSAGKVLRHMLR 620
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 13 LSRIAAVKRNS----VVTITGNRHNTGQQ-----FVQDVLNLARGLLEI-GLRSGDIVAI 62
LS AV+RN+ V T+T + + ++V L+R L ++ GL G + +
Sbjct: 8 LSLRQAVRRNADGIAVRTLTADGRQVATEMNWADLQKEVALLSRFLTQVPGLAPGVRLGV 67
Query: 63 SALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI 100
NS YL+ + A A G IV PLN RW+ E A+
Sbjct: 68 LGRNSAEYLQLMYACADAGVIVVPLNTRWAIGELRHAV 105
>gi|399009051|ref|ZP_10711497.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
gi|398114060|gb|EJM03895.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
Length = 519
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 256/554 (46%), Gaps = 59/554 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ Q L R ++TI G+R + QQFV+ V LA L E+G++ D VA+ LNS
Sbjct: 2 YFTQPLHRNLQRAPTRLMTICGDRRRSLQQFVERVARLAGALRELGVKRDDCVAMLGLNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ YLE+ AV + ++ N RWS +E + A+ + +L DE+ L+++ +
Sbjct: 62 DRYLEYCFAVPWADAVLNLCNTRWSAEENAYALNDSQTSILFVDETFKDVALQMRDQ-VA 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSL---RSLPFTHSWAPEGAVI-ICFTSGTT 183
SLR + +G + T D + GY ++ P + A++ + +T GTT
Sbjct: 121 SLRHLIYVGEGA----------TPDGMHGYEALLAQASPVEDACRGGDALLGVFYTGGTT 170
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G PKGV+ISH A LA A + + L AP+ H+ +S+ ++ G HV +
Sbjct: 171 GFPKGVMISHRAFWSSQLALDAEGLVPPEAIMLRAAPMFHLADMSTGYVGVLEGVTHVIL 230
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F A+ A+++H + + VP ++ L V S++ ++ G + +
Sbjct: 231 PAFLPDEAMMAIQRHGIQVAMLVPTMIQLLINHPEVGNY--DLSSLQHLVYGASPIQEQT 288
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ + P+ +L AYG TE G + G + G+
Sbjct: 289 LWGLQSLLPQLQLFQAYGQTEM-----------------GPIVSVLGPAQHTAAAAAAGM 331
Query: 364 --CVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ VE+++ DG VG ++ RG ++M Y + + G+ WL
Sbjct: 332 LRSCGRATRAVEVRIVDGDGREVPRGSVGEVVVRGPNMMSGYLNNPGQTQAALPGDGWLR 391
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD +D+ G +++V R I +GGENV+ EVE L HP + VVGI + + E
Sbjct: 392 TGDGARMDEEGYIFIVDRLKDMIVTGGENVFSAEVENALSSHPDVAMCAVVGIPSTQWGE 451
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A V L+ S+ + E L++ HC+++ + +KAP+ V +R
Sbjct: 452 AVHAVVVLKPG----------SAPDAEALIA------HCKQR-IASYKAPKR-VEFRTAL 493
Query: 537 PLTSTGKIRRDEVR 550
PL+ GK+ ++E+R
Sbjct: 494 PLSGAGKVLKNELR 507
>gi|113869452|ref|YP_727941.1| acyl-CoA synthetase [Ralstonia eutropha H16]
gi|113528228|emb|CAJ94573.1| Long-chain-fatty-acid-CoA ligase [Ralstonia eutropha H16]
Length = 557
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 251/545 (46%), Gaps = 71/545 (13%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
+F V LA GLL G++ GD V I A N +L A A IG I+ +N + E
Sbjct: 55 EFSDQVDRLASGLLRRGIQPGDRVGIWAPNRPEWLVTQFATARIGAILVNINPAYRRAEL 114
Query: 97 SRAITSIRPVMLVT-----------------DESSDSWYLELQHTAIPSLRWHVSLGSSS 139
A+ ML+T E +++ L+ +P L+W + +G +
Sbjct: 115 EYALNKAGVRMLITAARFKASDYLATLQALAPELAEAEPGALRSARLPRLQWVIRMGGEA 174
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ 199
+ + D L A+ ++R T + + A+ I FTSGTTG+PKG ++H ++
Sbjct: 175 TPGMLNYDALLAE---PDTVRLDAVTATLSALDAINIQFTSGTTGNPKGATLTHHNVVNN 231
Query: 200 SLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQ 257
+ G+ DV PL H G+ S +A + VGAC VF + F+ + ++A +
Sbjct: 232 GRFVAIAMRLGDSDVLCIPVPLYHCFGMVLSVLACVSVGACMVFPGEAFDPLATMQAASE 291
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
T+L VP + +A L + + +++ + G P E+MK +++
Sbjct: 292 ERCTALHGVPTMF--IAQLDHPEFSRFDFSALRTGIMAGAPCPIEVMKRVVADMHMSEVT 349
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYGMTETS P +F + T + + + + VG+ PH+E KV
Sbjct: 350 IAYGMTETS-------------------PVSFQSATDDPLDK-RVATVGRVQPHLECKVV 389
Query: 378 SD-----GSSHVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ G + TRG VM YW D + ++ G W+ TGD+ +IDD G +
Sbjct: 390 DALGEVVPTGATGELCTRGYSVMQGYWEDDERTREAIRDG--WMHTGDLATIDDEGYCNI 447
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
VGR + GGEN+YP E+E L +HP + + V G+ + + E V A + L+
Sbjct: 448 VGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPG---- 503
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
QS+ +E +R+ CR++ + +K PR ++ + P+T TGK+++ V R
Sbjct: 504 -----QSATEEE-------IRKFCRDQ-IAHYKIPR-YIRFVSEMPMTVTGKVQK-FVMR 548
Query: 552 EVMSH 556
+ M H
Sbjct: 549 DTMIH 553
>gi|84501811|ref|ZP_00999969.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
gi|84389806|gb|EAQ02440.1| acyl-CoA synthase [Oceanicola batsensis HTCC2597]
Length = 539
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 155/554 (27%), Positives = 242/554 (43%), Gaps = 54/554 (9%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L RIAA K ++ ++G+ T + ++V +A GLL G GD VA+ NS +
Sbjct: 3 DLLRRIAAEKPDADFLVSGSDRITFARLDEEVDRVAEGLLAAGFERGDHVALWLTNSPDW 62
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAIPSL 129
+ + A A IG +V P+N R+ E + S +L+ D Y EL T IP L
Sbjct: 63 VRMLFAAARIGMVVIPINTRYKSGELEYILRQSNARGLLMMDTCWGIDYPELLSTVIPDL 122
Query: 130 RWHVSLGSSSSDFVNKRDMLT---ADILKGYSLRSL-----------PFTHSWAPEGAVI 175
S + + + +I S+ SL T + PE V+
Sbjct: 123 ASQRPGDIHSEALPDLHAIFSWKDTNIPAATSMASLLDTPANPERLRAATEAVKPEDPVL 182
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAML 234
IC+TSGTTG PKG + SH A+I QS+ ++G D L P H+ GL + +
Sbjct: 183 ICYTSGTTGRPKGAMHSH-AVIRQSMNVAQVMGMKTGDAALAHMPFYHVAGLFMGVLPAV 241
Query: 235 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKI 292
+ G + +P + ++ AL+ +E V +P D + + RD +V+
Sbjct: 242 IHGMSLIVMPDWSAERALDLIETEKVAHFGGIPTHFLDCFD----AQAKRPRDLSTVRAA 297
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
GG + +++EA F ++++YGMTET+ S TF DP + G+
Sbjct: 298 WIGGAAISPGVVREAREVFSTPHILTSYGMTETTISTTFAHYDDPPEVAEENTGKLIGDY 357
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
V G +G ++ +G + RG V + Y++ A T +
Sbjct: 358 EARIVDPGNGATLG--------------ANEIGELQVRGHIVTMGYYNNPEATREAITSD 403
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W TGD+G D G + + GR GG N YP E+EA L HP I +VVG+ +
Sbjct: 404 GWFRTGDLGVFDARGYLKITGRIKEMFIVGGSNTYPAEIEAHLETHPAIRQAMVVGVPHE 463
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
RL ++ A +R E D+ S + HCR + +K PR +V +
Sbjct: 464 RLGQVGFAFIRRVE----GADPIDEKS-----------VIDHCR-GVIADYKVPR-YVRF 506
Query: 533 RKPFPLTSTGKIRR 546
FP+T +GKI+R
Sbjct: 507 ATDFPMTESGKIQR 520
>gi|311029635|ref|ZP_07707725.1| AMP-dependent synthetase and ligase [Bacillus sp. m3-13]
Length = 507
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/538 (26%), Positives = 242/538 (44%), Gaps = 75/538 (13%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R QF ++V LA GL+++G+ GD VA NS+ ++ A A IG ++ P+N+R
Sbjct: 25 RQYNYDQFNREVNKLAHGLIDLGVLKGDKVAFMMKNSDTFVFSYFAGAKIGAVIVPMNFR 84
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLT 150
+ E + +++ DE E + T ++ +SS+ + +
Sbjct: 85 LTASEIKYILEQSEAKVVICDE-------EFEET--------IATAKASSNVEKVIVVGS 129
Query: 151 ADILKGYSLRSLPFTHSWAPEGAVI------ICFTSGTTGSPKGVVISHSALIVQSLAKI 204
I + S + T+ P+ V I +TSGTTG PKG + H + L+ +
Sbjct: 130 PTIAENRSYAEVLSTNVENPKVEVFETDELEILYTSGTTGRPKGALFDHRRIFNVGLSMM 189
Query: 205 AIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSL 263
+G + + +LH APL H L+ + + ++GA H F L+A+++H +T
Sbjct: 190 ISMGINQQERFLHIAPLFHSAQLNLFLVSGTVLGATHFIHRDFHPVHTLQAIQEHKITHF 249
Query: 264 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VPA+ L + S+K+ G + EL+K++ N F + + G+T
Sbjct: 250 FGVPAMFNFLLQVPNADSY--DLSSIKRCGYGAAPMAPELVKKSMNLFKNDQFFNLCGLT 307
Query: 324 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 383
E + L DP H+ GKP+ E +V +
Sbjct: 308 EAGPN---GILLDPI------------------GHKKHLGKNGKPSFLTEARVVDETGRD 346
Query: 384 -----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRR 435
VG + +G +M Y+ KP + + WL TGD+ ++D+ GN+ LV R+
Sbjct: 347 IEVGAVGEFILKGESIMKEYY----KKPEETKAALKDGWLYTGDLATVDEEGNITLVDRK 402
Query: 436 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 495
I SGGENVY EVE VL +HP ++ ++G+ + W E+ C
Sbjct: 403 KDMIISGGENVYSIEVEEVLYEHPQVLEAAIIGLPDEV----------------WGEAVC 446
Query: 496 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+K+ +++ E L+Q CR+K L G+K PR + + P ++GKI + ++R+++
Sbjct: 447 AVVVPHKDQVVNEEELKQFCRQK-LAGYKVPRR-IFLEETLPRNASGKILKYQLRQQL 502
>gi|153001163|ref|YP_001366844.1| AMP-binding domain-containing protein [Shewanella baltica OS185]
gi|160875833|ref|YP_001555149.1| AMP-binding domain-containing protein [Shewanella baltica OS195]
gi|217972916|ref|YP_002357667.1| AMP-binding domain-containing protein [Shewanella baltica OS223]
gi|378709035|ref|YP_005273929.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|418024593|ref|ZP_12663575.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
gi|151365781|gb|ABS08781.1| AMP-dependent synthetase and ligase [Shewanella baltica OS185]
gi|160861355|gb|ABX49889.1| AMP-dependent synthetase and ligase [Shewanella baltica OS195]
gi|217498051|gb|ACK46244.1| AMP-dependent synthetase and ligase [Shewanella baltica OS223]
gi|315268024|gb|ADT94877.1| AMP-dependent synthetase and ligase [Shewanella baltica OS678]
gi|353535879|gb|EHC05439.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS625]
Length = 570
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 156/579 (26%), Positives = 257/579 (44%), Gaps = 74/579 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHN--TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L IAA + + + ++H Q++ + LA GLL++G++SGD V I + N
Sbjct: 30 IGQYLDEIAATYPDQLAVVVHHQHIRWNYHQYLAQIEALATGLLKLGIKSGDRVGIWSPN 89
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLE- 120
+ +EW L A A IG I+ +N + +E A++++ R V + D+ S YLE
Sbjct: 90 N---IEWCLTQYATAKIGAIMVCINPAYRPEELQYALSNVGCRAV-ICADKFKSSNYLEM 145
Query: 121 ---------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT 165
LQ A+P L + + +G+ S + D L D+
Sbjct: 146 LYELAPELTSCPAGQLQAKAVPELEFVIRMGAEKSVGMLNFDDLLVDVTADDKAALESIG 205
Query: 166 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 225
+ +P ++ I FTSGTTGSPKG +SH ++ + + D PL H
Sbjct: 206 KALSPYDSINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHDKLCIPVPLYHCF 265
Query: 226 GLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
G+ ++ L GA VF + F+ + L+ +EQ T+L VP + +A L + T
Sbjct: 266 GMVLGSLVCLAKGAAAVFPGESFDPLTTLQVIEQEGCTALHGVPTMF--IAELEHPEFTR 323
Query: 284 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 343
S++ + G P E+M+ N +++ YG TE S L +T D +E
Sbjct: 324 FDLSSLRTGVMAGATCPEEVMRRVQNLMYMKEVLIGYGQTE-CSPLNHITEIDSPVEK-- 380
Query: 344 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRY 398
+ + VG+ PH E+K+ + + G + +RG +M Y
Sbjct: 381 -----------------RVLTVGRALPHTEVKIVDEFGEVLPVNQPGEVCSRGYCIMQCY 423
Query: 399 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 458
W+ + WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H
Sbjct: 424 WNDPEKTAATIDSAGWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTH 483
Query: 459 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 518
+ V G+ + + E V A +++R +E + +R EK
Sbjct: 484 KDVQDAAVFGVQSDKYGEEVCAWIKVRSGSAITEDD----------------IRHFLTEK 527
Query: 519 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
FK PR ++ + +P+T TGKI++ ++R + L
Sbjct: 528 -FAYFKVPR-YIKFVDQYPMTVTGKIQKFKMRELMYQEL 564
>gi|256372142|ref|YP_003109966.1| AMP-dependent synthetase and ligase [Acidimicrobium ferrooxidans
DSM 10331]
gi|256008726|gb|ACU54293.1| AMP-dependent synthetase and ligase [Acidimicrobium ferrooxidans
DSM 10331]
Length = 502
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 162/547 (29%), Positives = 241/547 (44%), Gaps = 74/547 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L R + R+ + G T + V LA GL +GL SGD VAI A N Y+E
Sbjct: 8 LMRAELIARDGTAVVCGATTLTYRDLADRVRRLANGLAGLGLASGDRVAIIADNCHRYVE 67
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
LAV G ++ PLN R S E S A+ +L+TD ++
Sbjct: 68 AYLAVPGAGFVLVPLNTRSSPAEISFALEDAGVRILLTDRDPAAY--------------- 112
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP-EGAVI-ICFTSGTTGSPKGVV 190
D +R + D + R+ P AP E V + +T GTTG KGV+
Sbjct: 113 --------DHSVERVVRMPDDYEDLLERTPPGPLPNAPTENDVAGLFYTGGTTGRSKGVM 164
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKS 250
++H LI ++ + DD +L AP+ H G + VGA +P F++ S
Sbjct: 165 LTHRNLIANAVTALEWTRMRADDRWLVMAPMFHAAGTCCVLTCCWVGASQAMLPSFDAAS 224
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEAT 308
AL+ +EQ T + VP ++ + L + + RD S++ + +G P E++K A
Sbjct: 225 ALDLIEQTRATGTLAVPTMLNAMNDL----QATEPRDVSSLRLLSHGASPAPLEILKRAH 280
Query: 309 NSFPKAKLISAYGMTETSS-SLTF----MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
FP+A+L+ YG TET+ + TF + L D + GQ AFG VT ++ P
Sbjct: 281 VLFPQAELLHLYGTTETAPIATTFAHEELHLDDRLAGSAGQ--PAFG-VTVVAL-DPD-- 334
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
G+P P E +G I RG +VM YW Q + + + W TGD+G +
Sbjct: 335 --GRPVPPGE----------IGEIAVRGNNVMAGYW-QLPDQSAEALRGGWYHTGDLGFL 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G ++LV R + +GGENVY EVE L +HP + V GI + R E V A V
Sbjct: 382 TDDGYLFLVDRLKDMVVTGGENVYTVEVEDALYRHPAVAEAAVFGIPDERWGEAVYAVVV 441
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
R ++ + LR + R + +K P+ P P + GK
Sbjct: 442 PRSP------------------VTEDELRSYLRTL-IASYKVPKRIQFQSDPLPKSGAGK 482
Query: 544 IRRDEVR 550
I + +R
Sbjct: 483 ILKRTLR 489
>gi|403725356|ref|ZP_10946493.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403205107|dbj|GAB90824.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 528
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 238/529 (44%), Gaps = 53/529 (10%)
Query: 29 GNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLN 88
G T QF + A + G+R+GD +A N+ LE LA + G A +N
Sbjct: 37 GTTDYTWAQFRTRIRANAAAQVADGIRTGDRIAFLDKNNLACLETTLAASLTGAANAVIN 96
Query: 89 YRWSFKEASRAITSIRP-VMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRD 147
+R S E + + R +++V E +D + +P++ + G D+ ++
Sbjct: 97 FRLSPDEVAYIVNDARARIVIVGSEFAD--LIAGLRDELPTVERVIVTGGVDDDY--EKW 152
Query: 148 MLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 207
+ A +R + P+ + + +TSGTTG PKG +++H +L + A
Sbjct: 153 IAGASDADFEPVR-------FDPDASFLQLYTSGTTGHPKGAMLTHRSLGAHNAAAAVGF 205
Query: 208 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
G+ V + PL H+GG S ++A + VGA + + + + L+ + + VT VP
Sbjct: 206 GFTPSSVNMVAMPLFHVGGSSWSLAGISVGAQTIVVRDVDPSAVLDEIVERKVTHAFFVP 265
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
A+ RV + +V+ + GG +P M+ ++P A YGMTE S
Sbjct: 266 AVFGFFLEEPRVAD--RDYSAVRCLGYGGSPMPLPTMRACLETWPDADFYQVYGMTEMSG 323
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS---- 382
+ + D + H + V G+P P V + V DG++
Sbjct: 324 VFSVLGPEDHR----------------DLAHPERLVSAGRPLPGVTVTVVDRDGNALAPG 367
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
+G + ML YW A G+ WL TGD G +DD G +++ R I SG
Sbjct: 368 SIGEFWVQSKQHMLGYWGNPEATSKTLVGDDWLRTGDAGLLDDDGYLYISDRVKDMIISG 427
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
GEN+YP EVE V++++P + + V+G+ + + E V A V L + D S+ +
Sbjct: 428 GENIYPAEVERVIIENPAVADVAVIGVPDEKWGETVKAVVVLAD---------DASTTDV 478
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
EL+ +CRE+ L G+K P+ V + P STGKI + E+R+
Sbjct: 479 ELI-------AYCRER-LAGYKTPKS-VEFLSALPRNSTGKILKRELRK 518
>gi|329940648|ref|ZP_08289929.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
gi|329300709|gb|EGG44606.1| AMP-binding domain protein [Streptomyces griseoaurantiacus M045]
Length = 548
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 239/549 (43%), Gaps = 69/549 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T +F V +ARGLL G+ +GD V I A+N EW+L A
Sbjct: 40 DREALVDVPSGRRWTYAEFGAAVDEVARGLLAKGVTTGDRVGIWAVNCP---EWVLTQYA 96
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL-ELQHTAIPSLRWH 132
A IG ++ +N + E + +L+ + SD L E P LR
Sbjct: 97 TARIGAVMVNINPAYRAHELEFVLRQAGVTLLIASLAHKGSDYRALVEEVRGRCPDLRET 156
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +G S D LTA + R + + + I +TSGTTG PKG +S
Sbjct: 157 VYIGDPSWD------ALTAGAVSVPQDRPAAIGAGLSCDDPINIQYTSGTTGFPKGATLS 210
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ +GY E D P H G+ + GAC V P FE +
Sbjct: 211 HHNILNNGFWVGRTIGYTEQDRVCLPVPFYHCFGMVMGNLGATSHGACIVIPAPSFEPAA 270
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV+ TSL VP + +A L S++ + G P E+MK
Sbjct: 271 TLRAVQSERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVMKRVVTE 328
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
A++ YGMTETS ++ T D LE H+ VG+ P
Sbjct: 329 MHMAEVSICYGMTETSP-VSLQTRRDDDLE-----------------HRTG--TVGRVLP 368
Query: 371 HVELKVCSD--------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
H+E+KV G+S G + TRG VML YW++ V W+ TGD+
Sbjct: 369 HIEVKVVDPVTGVTQPRGTS--GELCTRGYSVMLGYWEEPAKTAEVVDAGRWMHTGDLAV 426
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+ + G V +VGR I GGENVYP E+E L HP I + VVG+ + R E V+ACV
Sbjct: 427 MREDGYVEIVGRIKDMIIRGGENVYPREIEEFLYAHPKIADVQVVGVPHERYGEEVLACV 486
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTST 541
RE+ D + + +R C E L +K P RL VL FP+T +
Sbjct: 487 IPREAG-------DPPTLQE--------VRAFC-EGRLAHYKVPTRLSVL--DSFPMTVS 528
Query: 542 GKIRRDEVR 550
GK+R+ E+R
Sbjct: 529 GKVRKVELR 537
>gi|184201926|ref|YP_001856133.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183582156|dbj|BAG30627.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 540
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 249/554 (44%), Gaps = 70/554 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
++V + + T ++F+ DV +LA GL +G+R+GD V I NS W EW+L A A
Sbjct: 37 EALVDVAAGKRWTYREFLHDVRSLATGLDRLGVRTGDRVGIWGPNS-W--EWVLMQYASA 93
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHVS 134
+G I+ +N + E A+ +V+ ++SD + LE P L+ V
Sbjct: 94 ELGAILVNINPSYRQHEVDFALAQAGISTVVSSPAFKNSDYAGMLEAARPHAPELQNVVL 153
Query: 135 LGSSSSD--FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+GS D FV D A + G H+ + AV I +TSGTTG PKG +S
Sbjct: 154 MGSPEWDALFVEPDDARLASVATGL--------HA---DDAVNIQYTSGTTGRPKGATLS 202
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI--PKFESKS 250
H ++ ++ Y +D + PL H G+ C + + P F+ ++
Sbjct: 203 HRNILNNGYFIGELLHYTAEDRIVVVPPLYHCFGMVIGNLAATSHGCAIILSGPGFDPRA 262
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL AV Q TSL VP + +A L +++ + G P E+M++ +
Sbjct: 263 ALRAVAQERATSLYGVPTMF--IAELELPDFGDYDLSTLRTGVMAGSPCPMEVMRKVISE 320
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++ YGMTETS P +F + +S+ + G VG+ P
Sbjct: 321 MHMSEVAICYGMTETS-------------------PVSFQTRSDDSLDRRVG-TVGRVHP 360
Query: 371 HVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
HVE+K+ + G TRG VM YW Q E WL TGDI +D
Sbjct: 361 HVEVKIVDPSTGETVPRGQAGEFCTRGYSVMKGYWGQEEKTREAIDPEGWLHTGDIAVMD 420
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G + GR + GGEN+YP EVE L HP ++ V+G+ + + E ++ +RL
Sbjct: 421 EDGYAQITGRIKDMVIRGGENIYPREVEEFLYTHPDVVDAQVIGVPSEKYGEELMVWLRL 480
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R+ L++E + + K ++ K PR +V + FP+T TGK+
Sbjct: 481 RDGAP---------------ALTAEAILEFADGK-ISRHKIPR-YVHVVEEFPMTVTGKV 523
Query: 545 RRDEVRREVMSHLK 558
R+ E+R E + L
Sbjct: 524 RKVEMREEALKLLD 537
>gi|375362485|ref|YP_005130524.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371568479|emb|CCF05329.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 546
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 250/558 (44%), Gaps = 82/558 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +F + A+GL+++G+ GD VAI A N +L A A IG ++ +N +
Sbjct: 36 TYAEFDRLCRQTAKGLMKLGIEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQI 95
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRW--HVSLGSSSSDFVNKRDMLT 150
E + S +++ D + Y+E+ + IP L+ H L S F+ + +
Sbjct: 96 AELDYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCEHGRLRSKRYPFL-RTVLYI 154
Query: 151 ADILKGYSLRSLPFTHSWA---PEGAVI-------------------ICFTSGTTGSPKG 188
D +S P H W EG + + +TSGTTG PKG
Sbjct: 155 GD-------KSPPGMHRWDSLLKEGEAVTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKG 207
Query: 189 VVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKF 246
V++SH IV + A IA + D P H G + +A + GA + I +F
Sbjct: 208 VMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVSAGAAMIPIEQF 266
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ L+ VEQ T+L VP + +A L + + V+ + G P+E+M+E
Sbjct: 267 SPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMAGSPCPAEVMRE 324
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ AYG TE S +T T D + E + G
Sbjct: 325 VIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE-------------------TAG 364
Query: 367 KPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+++ G+S G + TRG HVM Y+ A + WL TGD+
Sbjct: 365 RALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTGDL 424
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
+D+ G + GR + GGEN+YP E+E +L +HP + + VVG+ + + E A
Sbjct: 425 AVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEAAA 484
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
VRL++ Q++ S+E +R C+E ++ +K PR +VL+ +P+T+
Sbjct: 485 WVRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-YVLFTDEYPMTA 526
Query: 541 TGKIRRDEVRREVMSHLK 558
+GKI++ ++R + + LK
Sbjct: 527 SGKIQKFKLREKTIEELK 544
>gi|377811455|ref|YP_005043895.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
gi|357940816|gb|AET94372.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
Length = 517
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 252/557 (45%), Gaps = 67/557 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ CL R + +VT R T ++F V LA LL +G++ V + ALNS
Sbjct: 2 YLTNCLHRALQQTPDQLVTSFRGRTRTYREFCDRVARLAHALLALGMQPDSRVGMLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
+ Y E+++AV + GG++ P+N RWS E ++ +L+ DE ++ +A
Sbjct: 62 DRYFEYMMAVWWGGGVLNPVNIRWSVPEIVYSLDDCNTRILIVDEHYAHLAASIRGSAAC 121
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTA-----DILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
P + G + + ++ ++ + D+ +GY E I +T G
Sbjct: 122 PPTLIYAGDGEAPAGMLSFESLIASHAPVEDMRRGY-------------EDLAAIMYTGG 168
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTGSPKGV++SH L + ++ + LH+AP HI ++ A+ + G +V
Sbjct: 169 TTGSPKGVMLSHRNLWTGCVNRLVDAPPIPNGRTLHSAPFFHIAAMTRALLQFIRGDMNV 228
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
IP F+ LE +E+ +T + VP ++ AT+ + S++++ G + +
Sbjct: 229 IIPMFQPAEVLETIERERITDIALVPIMIQ--ATISHPDFQRRDLSSLQRVAYGASPMTA 286
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
++++ P + +YG+TE G + + + + +
Sbjct: 287 AVLEKTIAMLPNVEFNHSYGLTE------------------GMIVSSNPADNHHEAARKK 328
Query: 362 GV--CVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
G+ G+ E+K+ DG + VG I+ RG VM YW++ G
Sbjct: 329 GLHTSAGRSICGTEIKIV-DGQDNEVPRGTVGEIIVRGPTVMQGYWNKPEETAQTLRGG- 386
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL TGD +D G V++V R I SGGENVY EVE + +HP + V+GI +
Sbjct: 387 WLHTGDGAYMDADGYVFIVDRIKDMIISGGENVYSAEVENAIARHPAVAMCAVIGIPHEI 446
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A V L+ SE++ LR HCRE ++ G+K P+ + +R
Sbjct: 447 WGEAVHAVVVLKPQSTLSEND----------------LRLHCRE-HIAGYKCPK-SIEFR 488
Query: 534 KPFPLTSTGKIRRDEVR 550
P+++ GKI + +R
Sbjct: 489 AELPMSAAGKILKRNLR 505
>gi|384265593|ref|YP_005421300.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898579|ref|YP_006328875.1| AMP-binding protein [Bacillus amyloliquefaciens Y2]
gi|380498946|emb|CCG49984.1| fatty-acyl-CoA synthase [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387172689|gb|AFJ62150.1| AMP-binding domain protein [Bacillus amyloliquefaciens Y2]
Length = 546
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/550 (26%), Positives = 249/550 (45%), Gaps = 66/550 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +F + A+GL+++G+ GD VAI A N +L A A IG ++ +N +
Sbjct: 36 TYAEFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQI 95
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL----------------RWHVSLG 136
E + S +++ D + Y+E+ + IP L R + +G
Sbjct: 96 AELDYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCERGRLRSKRYPFLRTVLYIG 155
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
S +++ D L D S + + + +TSGTTG PKGV++SH
Sbjct: 156 DKSPPGMHRWDSLLKDAESVTDAELDGRMDSLKKDDCIHMQYTSGTTGFPKGVMLSHFN- 214
Query: 197 IVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEA 254
IV + A IA + D P H G + +A + GA + I +F + L+
Sbjct: 215 IVNNAANIAECMKLTSCDRLCIPVPFFHCFGCVLGVLACVSAGAAMIPIEQFSPPAVLKT 274
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
VE+ T+L VP + +A L + + V+ + G P+E+M+E
Sbjct: 275 VEKEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMAGSPCPAEVMREVIGKMGMT 332
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+ AYG TE S +T T D + E + G+ PH+E+
Sbjct: 333 DITIAYGQTEASPVIT-QTRTDDSFERRVE-------------------TAGRALPHIEV 372
Query: 375 KVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
++ G+S G + TRG HVM Y+ A + + WL TGD+ +D+ G
Sbjct: 373 RIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEATEAAIDKDGWLHTGDLAVMDEDGY 432
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+ GR + GGEN+YP E+E +L +HP + + VVG+ + + E A +RL++
Sbjct: 433 CKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEAAAWIRLKDG- 491
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
Q++ S+E +R C+E ++ +K PR +VL+ +P+T++GKI++ +
Sbjct: 492 --------QTA-------SAEDIRAFCKE-HIARYKVPR-YVLFTDEYPMTASGKIQKFK 534
Query: 549 VRREVMSHLK 558
+R++ + LK
Sbjct: 535 LRKKTIEELK 544
>gi|385675554|ref|ZP_10049482.1| fatty-acyl-CoA synthase [Amycolatopsis sp. ATCC 39116]
Length = 503
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 151/540 (27%), Positives = 246/540 (45%), Gaps = 70/540 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+ +V R T ++ V LA GL E+G+ GDIV++ N ++E +LA+ IG
Sbjct: 17 DKIVLTQDERRVTNRELSARVHALAAGLRELGIGRGDIVSLLLYNHLEFVETVLALNHIG 76
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT-AIP--SLRWHVSLGSS 138
PLNYR S E ++ D + + E + A+P ++R LG +
Sbjct: 77 AAFLPLNYRLSPAEWE---------FILGDSEAAAILTEPEFAGAVPESAVRHRFLLGGT 127
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
+V+ +++ + G ++ P P+ + +TSGTT PKGV I+H+ L+
Sbjct: 128 RDGWVSYDELVARHL--GETVPVEPV----GPDALQRLMYTSGTTSRPKGVCITHTNLLY 181
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQ 257
++L +I G D L PL H+GGL A+A L G + KF+++ ++ +E+
Sbjct: 182 KNLGQIVEFGLTSADTTLVCGPLYHVGGLDLPALATLHAGGSLLLTRKFDAREVVDIIER 241
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
T++ P++M L L + T + S++ ++ GG +P L++ FP A
Sbjct: 242 DRPTNVWLAPSMMNALLHLPGI--TERDTSSIRFVIGGGEKMPVPLVERIRAVFPSAWFA 299
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV-CVGKPAPHVELKV 376
AYG+TET S TF ++ H V VG+P H+ +++
Sbjct: 300 DAYGLTETVSGDTFN----------------------DAEHMLSKVGSVGRPVVHLRVRI 337
Query: 377 CSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
+ V G I G V YW D ++ G W TGDIG +D+ G ++
Sbjct: 338 VDESGREVPRGQLGEITLSGPKVFAGYWRDPDATAKALRDG--WFHTGDIGRLDEDGYLY 395
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ R+ I SGGEN+ EVE VL +HP ++ VVG+ + R E+ A V LR
Sbjct: 396 VEDRKKDMIVSGGENIATPEVERVLYEHPDVVEAAVVGMPHERWGEVPKAFVVLRPG--- 452
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ D + L CR++ L FK P V + P T +GK+ + ++R
Sbjct: 453 --ATVDAAG-----------LVAFCRDR-LAKFKVP-AEVRFLDQLPRTPSGKVLKRDLR 497
>gi|289768167|ref|ZP_06527545.1| acyl-CoA synthetase [Streptomyces lividans TK24]
gi|289698366|gb|EFD65795.1| acyl-CoA synthetase [Streptomyces lividans TK24]
Length = 541
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 238/546 (43%), Gaps = 65/546 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R T +F V LARGLL G+ GD V I A+N EW+L A
Sbjct: 38 REALVDVPSGRRWTYAEFGAAVDELARGLLAKGVTRGDRVGIWAVNCP---EWVLVQYAT 94
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHV 133
A IG I+ +N + E + +LV +SSD +E P+LR V
Sbjct: 95 ARIGVIMVNVNPAYRAHELEYVLQQSGISLLVASLAHKSSDYRAIVEQVRGRCPALRETV 154
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G S D LTA R + + V I +TSGTTG PKG +SH
Sbjct: 155 YIGDPSWD------ALTAGAAAVEQDRVDALAAELSCDDPVNIQYTSGTTGFPKGATLSH 208
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ VGY E D P H G+ + GAC V P FE +
Sbjct: 209 HNILNNGYWVGRTVGYTEQDRVCLPVPFYHCFGMVMGNLGATSHGACIVIPAPSFEPAAT 268
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 269 LEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVEVMKRVVAEM 326
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS ++ T D LE H+ VG+ PH
Sbjct: 327 HMEQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG--TVGRVLPH 366
Query: 372 VELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV + G + TRG VML YW++ W+ TGD+ + +
Sbjct: 367 IEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTGDLAVMRE 426
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V +VGR I GGEN+YP EVE L HP I + VVG+ + R E V+ACV +R
Sbjct: 427 DGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPHERYGEEVLACVVVR 486
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGKI 544
++ L+ E LR +C L +K P RL +L FP+T +GK+
Sbjct: 487 DAAD---------------PLTLEELRAYC-AGQLAHYKVPSRLQLL--DSFPMTVSGKV 528
Query: 545 RRDEVR 550
R+ E+R
Sbjct: 529 RKVELR 534
>gi|194014794|ref|ZP_03053411.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
gi|194013820|gb|EDW23385.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus ATCC 7061]
Length = 545
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 242/548 (44%), Gaps = 64/548 (11%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
+ F ++V +GL+ +G++ GD +AI A N +L A A IG ++ +N + +E
Sbjct: 38 EAFFKEVKETGKGLMALGVQKGDHIAIMAPNVPEWLMLQFACASIGAVLVTVNTNFQSQE 97
Query: 96 ASRAIT-SIRPVMLVTDESSDSWYL----------------ELQHTAIPSLRWHVSLGSS 138
+ + S ++ + D ++ Y+ E+ TA P L+ V +G
Sbjct: 98 LAYLLKHSDSSMLFIVDGFKETSYVRMLEDLIPELQTAHQGEITSTAFPYLKSVVYIGER 157
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
+ + D + A + P+ + + +TSGTTG PKGV++SH+ ++
Sbjct: 158 TPKGMRSWDSIQAATKRTEDDEWEKRMEELTPDDVINMQYTSGTTGYPKGVMLSHTNIVC 217
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQ 257
+ + +D P H G + +A L G + I F + L+ VE+
Sbjct: 218 NASQIADCMKLTREDRMCIPVPFFHCFGSVLGVLACLAKGGTIIPIESFHPERVLQTVEK 277
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
T L VP + +A L +++ + G PS +MK +L
Sbjct: 278 EKCTVLHGVPTMF--IAELDHPNFHKYNLSTLRTGIMAGSLCPSHVMKAVIEQMGLKELT 335
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYG TE+S +T T D + E Q VG+ PH+E+K+
Sbjct: 336 IAYGQTESSPVIT-QTRTDDSFERRVQ-------------------TVGRALPHIEVKIT 375
Query: 378 SDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ G+ + G + TRG HVM Y+ A V + WL TGD+ +D+ G V +
Sbjct: 376 APGTPYEVPRGEQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTGDLAEMDEDGYVII 435
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
GR I GGENVYP+E+E VL HP I+ VVGI + E A +RL++
Sbjct: 436 TGRLKDMIIRGGENVYPKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGHA-- 493
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
++ E L +C+ + + +K P+ F + + +P+T++GKI++ +++
Sbjct: 494 --------------VTIETLTSYCQSQ-MARYKIPKYFFITDE-YPMTASGKIQKFRLKK 537
Query: 552 EVMSHLKS 559
+ + +K
Sbjct: 538 QALDLIKE 545
>gi|392953725|ref|ZP_10319279.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
gi|391859240|gb|EIT69769.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
Length = 575
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 155/543 (28%), Positives = 239/543 (44%), Gaps = 66/543 (12%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASR 98
+ V N A LL GL GD V I A N +EW + A A G ++ +N + E
Sbjct: 62 ERVDNAAAQLLAQGLEPGDRVGIWAPNCAEWVIAQ-FATAKAGLVLVNINPAYRRHELEY 120
Query: 99 AITSI--RPVMLVTDESSDSWYLELQHTA---------------IPSLRWHVSLGSSSSD 141
A+ + + ++L S + LQ A +P LR + LG S
Sbjct: 121 ALRHVGCKALILAAAFKSSDYLAMLQDLAPELAQCAPGQLHAARLPQLRLVIRLGDEVSP 180
Query: 142 FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
+ L ++ R + AV I FTSGTTGSPKG ++H ++
Sbjct: 181 GMLGFSSLLSEPAAEARARLDAIASAVDAHSAVNIQFTSGTTGSPKGATLTHRNILNNGY 240
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSALEAVEQHC 259
+ DD PL H G+ +A + GAC VF F++ S L+ V+
Sbjct: 241 FVGRAMRLTHDDKLCIPVPLYHCFGMVMGNLACVTHGACMVFPADSFDAASVLQTVQDER 300
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 319
T+L VP + +A L + DS++ + G P E+M++A ++ A
Sbjct: 301 CTALHGVPTMF--IAELDHPDFSRYTLDSLRTGIMAGAPCPIEVMRKAIERMHLREITIA 358
Query: 320 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
YGMTETS ++F + D LE + +G+ PH+E+K+ +
Sbjct: 359 YGMTETSP-VSFQSATDDPLER-------------------RVSTIGRVQPHLEVKIVDE 398
Query: 380 GSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
G + + G +L RG VML YW+ E W+ TGD+G ID+ G ++GR
Sbjct: 399 GGNTLPRGQRGELLVRGYSVMLGYWNDAQRTADTIDAEGWMRTGDLGLIDEEGYASILGR 458
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GGENVYP E+E L +HP I + VVG+ +A+ E + ACV + SE +
Sbjct: 459 AKDMVIRGGENVYPREIEEFLYRHPRIRDVQVVGVPDAKFGEELCACVIAQPGEATSEDD 518
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 554
+R CR + +K PR +V++ FP+T TGKI++ +R+ +
Sbjct: 519 ----------------IRAFCR-GEIAHYKIPR-YVVFVDEFPMTVTGKIQKFALRQAMS 560
Query: 555 SHL 557
L
Sbjct: 561 DRL 563
>gi|397587792|gb|EJK54032.1| hypothetical protein THAOC_26417 [Thalassiosira oceanica]
Length = 611
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 245/507 (48%), Gaps = 60/507 (11%)
Query: 85 APLNYRWSFKEASRAITSIRPVMLVTDESSDSW------YLELQHTAIPSLRWH------ 132
A +N RW+ E RAI + + + S + Y + + + LR
Sbjct: 120 AMINTRWTPTEIERAIGTTDGMHTCNEVESLTLLVYGRGYEQRANDTVGLLRIKGEKCIA 179
Query: 133 VSLGSSSSDFVNKRDMLT---ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP--- 186
+ L S D+ + R + +++++G + R + S + E AVI+ FTSGT+ SP
Sbjct: 180 LQLEEFSFDYASPRGLQECSRSEVVEGATSREV----SLSNEDAVIL-FTSGTS-SPRGA 233
Query: 187 KGVVISHSALIVQSLAKI-AIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
KGV +SH +L VQ+LAK + Y V T PL H+GGLSSA+ +++ G +F P
Sbjct: 234 KGVRLSHRSLYVQALAKTQSPCQYDTHTKVVATTVPLFHVGGLSSALGVMLGGGSLMFPP 293
Query: 245 K----FESKSALEAVEQ----HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
F+ S L+++ +L+ VPA++ A + K+ +V+ IL GG
Sbjct: 294 ATGKGFQPSSILKSIADDESTRSANTLVVVPAMLH--ALIEYTKQQSPVFPNVRLILVGG 351
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
+ + FP A+++ Y TE SS+TF L T + G P PN+
Sbjct: 352 QSIAGNVYINTRRMFPNARIVQTYACTEAGSSITFEDLGFATNGSSGGTP-------PNN 404
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSVS 409
CVG P H+++++ S H+ G I TRG H M YW + +
Sbjct: 405 NSVSGTSCVGYPPIHIQVEIFDQKSRHMPLRNGEMGIIGTRGPHTMSGYWSRGENNATFL 464
Query: 410 TGEVWLDTGDIGSID-DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ W+ T D+G D G ++ GR N I++GGE+V +VEA+L+QH II V
Sbjct: 465 SEADWMLTNDLGMKDPQSGKLYFCGRANDVIRTGGESVLANDVEAILMQHDDIIECAVFA 524
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + + E V A + L+ Q + S + +S +LL + +R+HC +L+GFK PR
Sbjct: 525 LPDEQFGECVCAALVLK---QGTRSEMEDAS---DLL---QRIRKHCSRHHLSGFKRPRK 575
Query: 529 FVLWRKPFPLTSTGKIRRDEVRREVMS 555
L+ P S+GKI + E++R+ ++
Sbjct: 576 VFLFTPALPRNSSGKILKHEIQRKTLA 602
>gi|344173641|emb|CCA88810.1| long-chain-fatty-acid-CoA ligase [Ralstonia syzygii R24]
Length = 571
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 262/559 (46%), Gaps = 85/559 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T + F + V LA GL +GL+ G+ + I + N EW+L A A +G I+ +N
Sbjct: 57 TWRAFAEQVDALAAGLHALGLQRGERIGIWSPNR---YEWVLTQFATARLGLILVNINPA 113
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHV 133
+ E A+ + +V E+ S YLE LQ +P+LRW +
Sbjct: 114 YRLAELEYALNKVGCKAIVAAEAFKTSRYLEMLQTLAPELATAQPGALQAAKLPALRWVI 173
Query: 134 SLGSSSSD-FVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+G ++ +N +++ +G S +L T + +P+ A+ I FTSGTTG+PKG +
Sbjct: 174 RMGEGATPGTINFGEVMARG--QGVSTGTLDAITAALSPDDAINIQFTSGTTGAPKGATL 231
Query: 192 SHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FES 248
+H ++ + +A+ G D + + PL H G+ S +A GAC VF + F+
Sbjct: 232 THVNIVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTATGACMVFPGEAFDP 290
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLPSELMK 305
+ L V + T+L VP + + ++ GR V + G G P E+MK
Sbjct: 291 LATLRTVAEERCTALHGVPTMF-----IAQLDHPEFGRFDVSSLRGGIMAGSPCPIEVMK 345
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
++ AYGMTETS P +F + + + + + V
Sbjct: 346 RVVAEMSLCEITIAYGMTETS-------------------PVSFQSAVTDPLDK-RVTTV 385
Query: 366 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+ PH+E+K+ DG+ V G + T+G VML YWD AK + S + W+ TGD
Sbjct: 386 GRIQPHLEVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESIRDGWMRTGD 443
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ + D G +VGR + GGENVYP E+E L +HP + + V G+ + + E V
Sbjct: 444 LATFDVDGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVC 503
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + L+ Q +E E +R+ C+++ + +K PR ++ + P+T
Sbjct: 504 AWIVLKPGQQATE----------------EEIREFCKDQ-IAHYKIPR-YIRFVTEMPMT 545
Query: 540 STGKIRRDEVRREVMSHLK 558
TGK+++ +R ++ LK
Sbjct: 546 VTGKVQKFVMRERMIEALK 564
>gi|291228112|ref|XP_002734032.1| PREDICTED: fatty Acid CoA Synthetase family member (acs-2)-like
[Saccoglossus kowalevskii]
Length = 621
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 158/580 (27%), Positives = 251/580 (43%), Gaps = 87/580 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +VV T +F +D+ LA G L IG+ GD V + + N EW+L A
Sbjct: 83 KTAVVFCQQGIRKTFHEFKEDIDKLAAGFLAIGIERGDRVGMWSPNK---YEWVLTQYAT 139
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES--SDSWYL-------ELQHT---- 124
A IG I +N + +E A+ + LV+D+ + +YL EL+H+
Sbjct: 140 ATIGAIQVNINPAYRPQELLYALKKVGCKALVSDQQFKTQDYYLILDEICPELEHSNAGD 199
Query: 125 ----AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+P L+ + +G D + + L + + I +TS
Sbjct: 200 IKSKVLPDLKSLIMMGKGHFPGAYMFDDIMEAGTHEHILEVKDIQDELQFDDPINIQYTS 259
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCHIGGLS-SAMAMLMVGA 238
GTTG+PKGV +SH ++ +GY E D V PL H G++ +++ + G+
Sbjct: 260 GTTGNPKGVTLSHHNILNNCNIVGRTLGYHERDHVICIPVPLYHCFGMTLGSLSGQIFGS 319
Query: 239 CHVFIPK-FESKSALEAVEQ----------HCV---TSLITVPAIMADLATLIRVKKTWK 284
V+ FE + L+A+E HC+ TS P + DL K
Sbjct: 320 TAVYPSAGFEPEETLKAIENERLISCLYVCHCLFRCTSQYGTPTMFIDLLHHPHFDKY-- 377
Query: 285 GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT-LYDPTLETPG 343
S+ + GG P E MK+ ++ YG+TETS +TF T +DP
Sbjct: 378 DMSSLFTGIMGGSPCPIETMKQVITKMNMKEVTICYGLTETSP-ITFQTSRFDPI----- 431
Query: 344 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLR 397
+ + +GKP H E K+ S H+ G + TRG ML
Sbjct: 432 ---------------ELRVSTIGKPVSHTEAKIIDPESGHIKAVETPGEMCTRGFSTMLG 476
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
YW S+ + WL GDI +D+ G +VGR N I GGEN+YP E+E L +
Sbjct: 477 YWGDEEKTKSIIGSDRWLHNGDIAVMDETGYCRIVGRMNDMIIRGGENIYPVEIEKFLYK 536
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
HP I + V+G+ + RL E+V A ++L+ + SE ++ C +
Sbjct: 537 HPKIEDVQVIGVPDERLGEVVCAWIKLKAAQTASEHE----------------IKDFC-Q 579
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ FK P+ ++ + FP+T +GKI++ ++R E + L
Sbjct: 580 GQIAYFKIPQ-YICFVDSFPMTISGKIKKLQMREESLGML 618
>gi|443622955|ref|ZP_21107468.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
gi|443343506|gb|ELS57635.1| putative Dicarboxylate-CoA ligase PimA [Streptomyces
viridochromogenes Tue57]
Length = 530
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 239/548 (43%), Gaps = 72/548 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R T +F DV LA LL G+ GD V I A+N EW+L A
Sbjct: 35 REALVDVPSGRRWTYARFAADVDELAYALLASGVAKGDRVGIWAVNCP---EWVLVQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHV 133
A IG I+ +N + E + +L ++SD +E P LR V
Sbjct: 92 ARIGAIMVNINPAYRTHEVEYVLNQAGVSLLFASLGHKTSDYRAMVEQVRGRCPRLRETV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G S + A I +G +PF + + + I +TSGTTG PKG +SH
Sbjct: 152 FIGDPSWE---------ALIARG---TPVPF-EELSCDDPINIQYTSGTTGFPKGATLSH 198
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ ++ Y E D P H G+ +A GAC V P F+ K+
Sbjct: 199 HNILNNGYFVGEMIAYSEQDRVCIPVPFYHCFGMVMGNLAATSHGACMVIPAPSFDPKAT 258
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 259 LEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVMKRVVTEM 316
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A++ YGMTETS T T D LE H+ VG+ PH
Sbjct: 317 NMAEVSICYGMTETSPVST-QTRRDDDLE-----------------HRTG--TVGRVLPH 356
Query: 372 VELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV + G + TRG VML YW++ W+ TGD+ + +
Sbjct: 357 IEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDPGRWMHTGDLAVMRE 416
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E V+ACV R
Sbjct: 417 DGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGVPHERYGEEVLACVIPR 476
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGKI 544
+ L+ E LR C + L +K P RL +L FP+T +GK+
Sbjct: 477 DPGD---------------PLTLEELRAFC-DGQLAHYKIPSRLRIL--DAFPMTVSGKV 518
Query: 545 RRDEVRRE 552
R+ E+R +
Sbjct: 519 RKVELREK 526
>gi|421731485|ref|ZP_16170608.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407073698|gb|EKE46688.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 546
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 249/558 (44%), Gaps = 82/558 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +F + A+GL+++G+ GD VAI A N +L A A IG ++ +N +
Sbjct: 36 TYAEFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKIGAVLVTINTNFQI 95
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRW--HVSLGSSSSDFVNKRDMLT 150
E + S +++ D + Y+E+ + IP L+ H L S F+ + +
Sbjct: 96 AELDYLLAHSDVSALIIMDSYRQTSYVEMVNKLIPELKTCEHGRLRSKRYPFL-RTVLYI 154
Query: 151 ADILKGYSLRSLPFTHSW----------------------APEGAVIICFTSGTTGSPKG 188
D +S P H W + + + +TSGTTG PKG
Sbjct: 155 GD-------KSPPGMHRWDSLLKEGEALTDAALDGRMDSLKKDDCIHMQYTSGTTGFPKG 207
Query: 189 VVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKF 246
V++SH IV + A IA + D P H G + +A + GA + I +F
Sbjct: 208 VMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVSAGAAMIPIEQF 266
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ L+ VEQ T+L VP + +A L + + V+ + G P+E+M+E
Sbjct: 267 SPPAVLKTVEQEACTALHGVPTMF--IALLHDSRFSEYDLSHVRTGIMAGSPCPAEVMRE 324
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ AYG TE S +T T D + E + G
Sbjct: 325 VIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE-------------------TAG 364
Query: 367 KPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+++ G+S G + TRG HVM Y+ A + WL TGD+
Sbjct: 365 RALPHIEVRIVRPGTSGEADRGEQGELCTRGYHVMKGYYKNQEATEEAIDKDGWLHTGDL 424
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
+D+ G + GR + GGEN+YP E+E +L +HP + + VVG+ + + E A
Sbjct: 425 AVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPKYGEEAAA 484
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
VRL++ Q++ S+E +R C+E ++ +K PR +VL+ +P+T+
Sbjct: 485 WVRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-YVLFTDEYPMTA 526
Query: 541 TGKIRRDEVRREVMSHLK 558
+GKI++ ++R + + LK
Sbjct: 527 SGKIQKFKLREKTIEELK 544
>gi|378716736|ref|YP_005281625.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
gi|375751439|gb|AFA72259.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans VH2]
Length = 561
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 246/550 (44%), Gaps = 71/550 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T +F +DVL LA GL +G+ +GD V + + N EW+L A A IG I+ LN
Sbjct: 59 TYAEFRRDVLALAAGLCRLGVAAGDRVGLWSPNRA---EWVLTQYATAEIGAILVNLNPA 115
Query: 91 WSFKEASRAIT-SIRPVMLVTDESSDSWY---LELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+ E A+T S V++ + DS Y L A P LR V S +
Sbjct: 116 YRQHEIEYALTQSGASVVVAAERYKDSDYAGMLAAARPAAPDLREVVLF--ESPQWAELT 173
Query: 147 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
T D L + R+ T + + I +TSGTTG PKG +SH + +
Sbjct: 174 AQPTPDELAAVADRAAGLTA----DDPINIQYTSGTTGFPKGATLSHRNIGNNGYLVGEL 229
Query: 207 VGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLI 264
+ Y DD P H G + +A GA V P F+ ++AL AV H TSL
Sbjct: 230 LDYSADDRICIPVPFYHCFGMVMGNLAATSHGATMVIPSPTFDPEAALRAVADHKCTSLY 289
Query: 265 TVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VP + +A+LA L + +++ + G P +M++ + ++ YGMT
Sbjct: 290 GVPTMFIAELALLDSGAEF--DLSTLRTGIMAGSPCPEHVMRQVVDRMHMGQVSICYGMT 347
Query: 324 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 383
ETS T + DP G VG+ PH+E+KV S
Sbjct: 348 ETSPVSTQTRMDDPLELRVG--------------------TVGRVGPHLEVKVIDPVSGE 387
Query: 384 V------GRILTRGAHVMLRYWDQ-------FLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
G TRG VM YW+Q + +P+ G W+ TGD+ +D G V
Sbjct: 388 TLRRGETGEFCTRGYSVMSGYWNQPDKSAEVLIPEPTDPQGSPWMRTGDLAVMDPNGYVR 447
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A +RLR
Sbjct: 448 ITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWIRLR----- 502
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
D +S+ L+++ +R+ K + K PR FV K FP+T TGK+R+ ++R
Sbjct: 503 -----DGASE-----LTADDVREFATGK-IARHKIPR-FVHVVKEFPMTVTGKVRKVQMR 550
Query: 551 REVMSHLKSL 560
E + L +L
Sbjct: 551 EESVEILGTL 560
>gi|379710061|ref|YP_005265266.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
gi|374847560|emb|CCF64630.1| acyl-CoA synthetase [Nocardia cyriacigeorgica GUH-2]
Length = 541
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 168/562 (29%), Positives = 251/562 (44%), Gaps = 67/562 (11%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EW 69
L R AA R ++V R T ++ V +LA GL G+ +GD V I A N EW
Sbjct: 26 LDRTAAAFGDREALVDCPSGRRWTYRELRAAVDSLASGLAGRGIVAGDRVGIWAPNCPEW 85
Query: 70 YLEWILAVAFIGGIVAPLN--YRWSFKEASRAITSIRPVMLVT-DESSDSWY---LELQH 123
+L A A IG I+ +N YR S E +R MLV+ E S Y +E
Sbjct: 86 FL-IQYATAKIGAILVNINPAYRTSELEYVLGQAGVR--MLVSAPEFKTSNYVAMIEQVR 142
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P L + LG+ + + TA + + R+ + + A+ I +TSGTT
Sbjct: 143 PECPGLEQVLILGTPEWEALAA----TAADHELLTTRAAELSM----DDAINIQYTSGTT 194
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ + GY E+D P H G+ +A GA V
Sbjct: 195 GFPKGATLSHHNILNNGYFVGELCGYTEEDRICVPVPFYHCFGMVMGNLAATSHGAAIVI 254
Query: 243 -IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
P F+ + L AVE TSL VP + D+ L +++ + +++ + G P
Sbjct: 255 PAPSFQPAATLAAVEAERCTSLYGVPTMFIDM--LAQLEDSAADLSTLRTGIMAGSPCPV 312
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK + +++ + YGMTETS ++ T D +++ +
Sbjct: 313 EVMKRVIDRMGMSEVCTCYGMTETSP-VSTQTRRDDSIDR-------------------R 352
Query: 362 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ PH+E+K+ + G + TRG VML YW+ W+
Sbjct: 353 TATVGRVGPHLEIKIVDPVTGRTVPRGEPGELCTRGYSVMLGYWNDPDRTAEAIDAARWM 412
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGDIG +D+ G V + GR + GGEN+YP E+E L HP I+ V+G+ + +
Sbjct: 413 HTGDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDPKYG 472
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E ++A VRLRE L ++ LR C K L FK PR +V
Sbjct: 473 EELMAWVRLREG---------------AAPLDADALRVFCAGK-LAHFKVPR-YVHVVDE 515
Query: 536 FPLTSTGKIRRDEVRREVMSHL 557
FP+T TGK+R+ E+R S L
Sbjct: 516 FPMTVTGKVRKAEMREMARSLL 537
>gi|291436418|ref|ZP_06575808.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291339313|gb|EFE66269.1| acyl-CoA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 541
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 239/549 (43%), Gaps = 71/549 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R T F V +ARGLL G+ GD V I A+N EW+L A
Sbjct: 39 REALVDLVSGRRWTYAAFGAAVDEVARGLLAKGVEKGDRVGIWAVNCP---EWVLVQYAT 95
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL-ELQHTAIPSLRWHV 133
A IG I+ +N + E + +LV+ + SD L E P LR V
Sbjct: 96 ARIGVIMVNINPAYRAHELEYVLKQAGISVLVSSLAHKGSDYRALVEQVRGKCPELRETV 155
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G S D LTA R + + V I +TSGTTG PKG +SH
Sbjct: 156 FIGDPSWD------ALTAGAATVPQERVEAIAAGLSCDDPVNIQYTSGTTGFPKGATLSH 209
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ +GY E D P H G+ +A GAC V P F+ ++
Sbjct: 210 HNILNNGYWVGRTIGYTEQDRVCLPVPFYHCFGMVMGNLAATSHGACIVIPAPSFDPEAT 269
Query: 252 LEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
LEAV++ TSL VP + +L R T S++ + G P E+MK
Sbjct: 270 LEAVQRERCTSLYGVPTMFIAELNLPGFARYDLT-----SLRTGIMAGSPCPVEVMKRVV 324
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
++ YGMTETS ++ T D +E H+ VG+
Sbjct: 325 AEMHMEQVSICYGMTETSP-VSLQTRRDDDME-----------------HRTG--TVGRV 364
Query: 369 APHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+KV + G + TRG VML YW++ V W+ TGD+
Sbjct: 365 LPHIEVKVVDPATGTTRPRGSTGELCTRGYSVMLGYWNEPERTAEVVDAGRWMHTGDLAV 424
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+ + G V +VGR I GGEN+YP E+E L HP + + VVG+ + R E V+ACV
Sbjct: 425 MREDGYVEIVGRIKDMIIRGGENIYPREIEEFLHTHPEVADVQVVGVPHERYGEEVLACV 484
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTST 541
R+ + E LR CR++ L +K P RL +L FP+T +
Sbjct: 485 VPRDPADPP---------------TLEDLRAFCRDR-LAHYKVPSRLQIL--DAFPMTVS 526
Query: 542 GKIRRDEVR 550
GK+R+ E+R
Sbjct: 527 GKVRKVELR 535
>gi|373949980|ref|ZP_09609941.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
gi|386324187|ref|YP_006020304.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|333818332|gb|AEG10998.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica BA175]
gi|373886580|gb|EHQ15472.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS183]
Length = 570
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 156/580 (26%), Positives = 258/580 (44%), Gaps = 76/580 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHN--TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L IAA + + + ++H +Q++ + LA GLL++G++SGD V I + N
Sbjct: 30 IGQYLDEIAATYPDQLAVVVHHQHIRWNYRQYLAQIEALATGLLKLGIKSGDRVGIWSPN 89
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLE- 120
+ +EW L A A IG I+ +N + +E A++++ R V + D+ S YLE
Sbjct: 90 N---IEWCLTQYATAKIGAIMVCINPAYRPEELQYALSNVGCRAV-ICADKFKSSNYLEM 145
Query: 121 ---------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT 165
LQ A+P L + + +G+ S + D L D+
Sbjct: 146 LYELAPELTSCPAGQLQAKAVPDLEFVIRMGAEKSVGMFNFDDLLVDVTADDKAALESIG 205
Query: 166 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 225
+ +P ++ I FTSGTTGSPKG +SH ++ + + D PL H
Sbjct: 206 KALSPYDSINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHDKLCIPVPLYHCF 265
Query: 226 GLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
G+ ++ L GA VF + F+ + L+ +EQ T+L VP + +A L + T
Sbjct: 266 GMVLGSLVCLSKGAAAVFPGESFDPLTTLQVIEQERCTALHGVPTMF--IAELEHPEFTR 323
Query: 284 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 343
S++ + G P E+M+ N +++ YG TE S
Sbjct: 324 FDLSSLRTGVMAGATCPEEVMRRVQNLMYMKEVLIGYGQTECSP---------------- 367
Query: 344 QLPQAFGNVTP-NSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLR 397
++T NS + + + VG+ PH E+K+ + + G + +RG +M
Sbjct: 368 -----LNHITEINSPVEKRVLTVGRALPHTEVKIVDEFGEVLPINQPGEVCSRGYCIMQC 422
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
YW+ + WL +GDIG +D+ G V +VGR I GGEN+YP E+E L
Sbjct: 423 YWNDPEKTAATIDSAGWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYT 482
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
H + V G+ + + E V A +++R +E E +R E
Sbjct: 483 HKDVQDAAVFGVQSDKYGEEVCAWIKVRSGATITE----------------EDIRHFLTE 526
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
K FK PR ++ + +P+T TGKI++ ++R + L
Sbjct: 527 K-FAYFKVPR-YIKFVDQYPMTVTGKIQKFKMRELMYQEL 564
>gi|425734007|ref|ZP_18852327.1| AMP-binding domain protein [Brevibacterium casei S18]
gi|425482447|gb|EKU49604.1| AMP-binding domain protein [Brevibacterium casei S18]
Length = 561
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 166/571 (29%), Positives = 248/571 (43%), Gaps = 86/571 (15%)
Query: 16 IAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWI 74
IA V R S +R T +F +D LA LLE G+R GD V I A N EW L
Sbjct: 35 IALVDRGS------DRRWTYAEFDKDTDALAAALLERGVRKGDRVGIWAQNVGEWALVQ- 87
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS 134
A A IG I+ +N + E + +L+ S L HT +L VS
Sbjct: 88 YATAKIGAILVNVNPSYRAHELEYVVRQSGMTLLI------SQILNPPHTDFHALATEVS 141
Query: 135 LGSSSSDFV---------------NKRDMLTADILKGYSLRSLPFTH----------SWA 169
D V +R+ + +G SL P +
Sbjct: 142 GTVPDLDLVFIDTVPAALIGDTAVGERESFARLLDEGRSLLEDPGAKYAVRLEQAAGELS 201
Query: 170 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLS 228
+ + I +TSGTTG PKGV +SH ++ ++ Y DD + + P H G +
Sbjct: 202 ADDPINIQYTSGTTGFPKGVTLSHHNILNNGYFIAELLSYTPDDSVVLSVPYYHCFGMVM 261
Query: 229 SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 287
+A L GA V P F+ ++L AV + TSL VP + +A L +
Sbjct: 262 GNLAALSHGASIVLPSPGFDPAASLTAVAEEKATSLYGVPTMF--IAELGLPDFSDFDLS 319
Query: 288 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 347
S++ + G P E+M+ + +++ YGMTETS ++ MT D +LE +
Sbjct: 320 SLRTGIMAGSPCPVEVMRHVIHDMNMSEVAICYGMTETSP-VSTMTRVDDSLEARTE--- 375
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 401
VG+ PHVE+K+ + G + TRG VML YW++
Sbjct: 376 ----------------TVGRVMPHVEVKIVDPVTGQTMPRGQKGELCTRGYSVMLGYWEE 419
Query: 402 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
W+ TGD+ +DD G V + GR + GGENVYP E+E L QHP I
Sbjct: 420 PEKTAEAIDSARWMHTGDLAIMDDDGYVDISGRIKDMVIRGGENVYPREIEEFLYQHPAI 479
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
+ V+G+++ + E ++A V L++ + L++E +R+ + L
Sbjct: 480 SDVQVIGVSDEKYGEELMAWVILKDGYD---------------TLTAEDVREFAAGR-LA 523
Query: 522 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
FK PR +V R FP+T +GKIR+ E+R E
Sbjct: 524 HFKIPR-YVEVRDSFPMTVSGKIRKVELREE 553
>gi|378549663|ref|ZP_09824879.1| hypothetical protein CCH26_06240 [Citricoccus sp. CH26A]
Length = 552
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 157/551 (28%), Positives = 244/551 (44%), Gaps = 61/551 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+R+++V + R + +F DV LA GLLE G+R+GD V I A N +EW L A A
Sbjct: 38 ERDALVEVQTGRRWSYAEFAADVARLATGLLEAGIRTGDRVGIWAPNVAEWTLVQ-YATA 96
Query: 79 FIGGIVAPLNYRWSFKEASRAITS--IRPVMLVTDESSDSWYLELQ--HTAIPSLRWHVS 134
IG I+ +N + E A+T+ IR V+ + + + L P LR V
Sbjct: 97 QIGAILVNINPAYRRDELQYALTTSGIRTVIAASSFKTSDYERMLADVRDDCPELRDVVI 156
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
LG+ + + TAD R +P+ + I +TSGTTG PKG ++H
Sbjct: 157 LGTPEWEGLAG---ATAD-----EDRLAKVAADLSPDDPINIQYTSGTTGFPKGATLTHR 208
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSAL 252
++ V Y E D P H G+ +A GA V P F+ + L
Sbjct: 209 NILNNGYFDGERVEYTEADRICIPVPFYHCFGMVIGNLAATTHGAAMVIPAPGFDPAATL 268
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
AV TSL VP + +A L S++ + G P +M++
Sbjct: 269 HAVATEKCTSLYGVPTMF--IAELGLPDFESYDLSSLRTGVMAGSPCPESVMRQVIEQMN 326
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+ YGMTETS P + + T +S+ + + VG+ H+
Sbjct: 327 MTDVTICYGMTETS-------------------PVSIQSSTSDSLER-RVSTVGRVGAHL 366
Query: 373 ELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
++V + V G + T+G VM YW+ E W+ TGD+G +D+
Sbjct: 367 RIRVVDPATGEVVPRGQAGELQTQGYAVMKGYWNDPERTAEAIDAEGWMHTGDLGVMDEE 426
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V + GR + GGEN+YP E+E L HP II VVG+ + + E ++A +R+RE
Sbjct: 427 GYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIIDAQVVGVPDEKYGEELIAWIRIRE 486
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++E LR++C + + +K PR +V + FP+T TGK+R+
Sbjct: 487 GADAP---------------TAESLREYCSGR-IAHYKIPR-YVRVIEEFPMTVTGKVRK 529
Query: 547 DEVRREVMSHL 557
++R + M L
Sbjct: 530 VDLREQAMELL 540
>gi|312199209|ref|YP_004019270.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311230545|gb|ADP83400.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 506
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 150/531 (28%), Positives = 229/531 (43%), Gaps = 79/531 (14%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF----IGG 82
+ G+ T QF + V A E+G+ +GD VA+ A NS EW +A AF GG
Sbjct: 48 VDGDLRLTYVQFTERVRAAAGAFAELGVEAGDRVALWAPNSA---EWAIA-AFGLLTAGG 103
Query: 83 IVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDF 142
++ P+N R+ EA+ I ++T + + + G + D
Sbjct: 104 VLVPVNTRYKAAEAADIIVRSGAKAVLT------------QPGFLGIDYEIPAGVTGVDL 151
Query: 143 VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLA 202
K D LT+ PF I FTSGTTG PKGV+++H +
Sbjct: 152 --KSDFLTS---------GSPFERKVDGGDIADIIFTSGTTGRPKGVMMNHRQTLRLYSE 200
Query: 203 KIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVT 261
GE D YL P H GL + + A L+ GA + F+ + E VE+ +T
Sbjct: 201 WTYQAQLGEGDRYLMINPYFHTFGLKAGLIASLIKGATMFPLAVFDVATVAEIVEREKIT 260
Query: 262 SLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISA 319
L P + L I + GRD S++ + G +P EL++ P +++
Sbjct: 261 MLPGAPTVYQSLLEAIGSGQI-AGRDLSSLRCAVTGSADIPVELIRRMKQELPFQHIMTG 319
Query: 320 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
YG+TE ++ T PG +F ++ VG P +E+ + D
Sbjct: 320 YGLTEAGTA---------TASRPGD---SFEDIA---------TTVGAPCDGIEVAIAGD 358
Query: 380 GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRI 439
+L RG VM Y++ A + WL TGD+GS+DD G V ++GR+
Sbjct: 359 S-----EVLIRGYSVMQGYFENPAATTDTIDADGWLHTGDLGSMDDRGYVKIIGRKKDMF 413
Query: 440 KSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSS 499
GG N YP E+E LL+HP I V+G+ +AR+ E+ A + R + + S
Sbjct: 414 IVGGFNAYPAEIEGYLLEHPAIAQAAVIGVPDARMGEVCKAFLVKRSGAEVTADEIIAWS 473
Query: 500 KNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
K + + GFKAPR FV + PL +TGK+ +D++R
Sbjct: 474 KER-----------------MAGFKAPR-FVEFLDALPLNATGKVVKDQLR 506
>gi|432336166|ref|ZP_19587696.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
gi|430776934|gb|ELB92327.1| long-chain-fatty-acid--CoA ligase [Rhodococcus wratislaviensis IFP
2016]
Length = 530
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 239/520 (45%), Gaps = 67/520 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA L G+ GD V + LN + E +LA+ +G I P+N+R + E +
Sbjct: 55 LAGALSRRGVNFGDRVLLLTLNRTEFFEAVLAINALGAIAVPVNFRLTPPEVAFIARDCG 114
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
+ T+ + ++ +P L V++G+ S V + L ++ Y+ LP
Sbjct: 115 ARAVFTEPALAPLVAAVRQD-VPELSLVVNIGADSEAGVLGYEELVSEAGPAYAPVDLP- 172
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCH 223
+ +I +TSGTTG+PKG V+SHS ++ QS+ I + Y DD+ +P+ H
Sbjct: 173 -----EDTPSLILYTSGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFH 227
Query: 224 IGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLI 277
+ L S MLM+G V P F L+ EQ +T++ VP A+ AD
Sbjct: 228 VAALGSVAPMLMLGGTTVIHPLKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD----- 282
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
T +GRD ++++ G S+ +++ ++FP+A +++ +G TE S +T + D
Sbjct: 283 ---PTVRGRDLALRVISWGAAPASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGD 338
Query: 337 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRG 391
+ G VGKP P ++ +V D + V G I+ RG
Sbjct: 339 DAIRKLGS--------------------VGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRG 378
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
+ML YW A G W +GD+ DD G V++V R+ I SGGEN+Y EV
Sbjct: 379 PTMMLEYWQNPAATADAFAGG-WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEV 437
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL HP I VVG + + TE+ VA V L D+ S L+ E L
Sbjct: 438 ENVLFGHPRIREAAVVGRPDPKWTEVPVAVVALD----------DEGSD-----LTVEEL 482
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K L +K P+ V+ P ++GK+ + E+R+
Sbjct: 483 AAWLDDK-LARYKHPKDVVI-VDALPRNASGKVVKGELRK 520
>gi|424851568|ref|ZP_18275965.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
gi|356666233|gb|EHI46304.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
Length = 530
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 152/520 (29%), Positives = 239/520 (45%), Gaps = 67/520 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA L G+ GD V + LN + E +LA+ +G I P+N+R + E + I
Sbjct: 55 LAGALSRRGVNFGDRVLLLTLNRTEFFEAVLAINALGAIAVPVNFRLTPPEVA-FIARDS 113
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
V E + + + +P L V++G+ + V + L ++ Y+ LP
Sbjct: 114 GARAVFTEPALAPLVAAVRQDVPELSLVVNIGADTEADVLGYEELVSEAGPAYAPVDLP- 172
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCH 223
+ +I +TSGTTG+PKG V+SHS ++ QS+ I + Y DD+ +P+ H
Sbjct: 173 -----EDTPSLILYTSGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFH 227
Query: 224 IGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLI 277
+ L S MLM+G V P F L+ EQ +T++ VP A+ AD
Sbjct: 228 VAALGSVAPMLMLGGTTVIHPLKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD----- 282
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
T +GRD ++++ G S+ +++ ++FP+A +++ +G TE S +T + D
Sbjct: 283 ---PTVRGRDLALRVISWGAAPASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGD 338
Query: 337 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRG 391
+ G VGKP P ++ +V D + V G I+ RG
Sbjct: 339 DAIRKLG--------------------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRG 378
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
+ML YW A G W +GD+ DD G V++V R+ I SGGEN+Y EV
Sbjct: 379 PTMMLEYWQNPAATADAFAGG-WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEV 437
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL HP I VVG + + TE+ VA V L D+ S L+ E L
Sbjct: 438 ENVLFGHPRIREAAVVGRPDPKWTEVPVAVVALD----------DEGSD-----LTVEEL 482
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K L +K P+ V+ P ++GK+ + E+R+
Sbjct: 483 AAWLDDK-LARYKHPKDVVI-VDALPRNASGKVVKGELRK 520
>gi|157692555|ref|YP_001487017.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
gi|157681313|gb|ABV62457.1| long-chain-fatty-acid--CoA ligase [Bacillus pumilus SAFR-032]
Length = 545
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 243/548 (44%), Gaps = 64/548 (11%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
+ F ++V +GL+ +G++ GD +AI A N +L A A IG ++ +N + +E
Sbjct: 38 EAFFREVKETGKGLMALGVQKGDHIAIMAPNVPEWLILQFACASIGAVLVTVNTNFQSQE 97
Query: 96 ASRAIT-SIRPVMLVTDESSDSWYL--------ELQ--------HTAIPSLRWHVSLGSS 138
+ + S ++ + D ++ Y+ ELQ TA P L+ V +G
Sbjct: 98 LAYLLKHSDSSMLFIVDGFKETSYVRMLEDLIPELQTAHQDDITSTAFPYLKSVVYIGEH 157
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
+ + D + A + + P+ + + +TSGTTG PKGV++SH+ ++
Sbjct: 158 TPKGMRSWDSIQAAAKRTENDEWEKRMEELTPDDVINMQYTSGTTGYPKGVMLSHTNIVC 217
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQ 257
+ + DD P H G + +A L G + I F + L+ VE+
Sbjct: 218 NASQIGDCMKLTRDDRMCIPVPFFHCFGSVLGVLACLTKGGTIIPIESFHPERVLQTVEK 277
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
T L VP + +A L +++ + G PS +MK +L
Sbjct: 278 EKCTVLHGVPTMF--IAELDHPNFHKYNLSTLRTGIMAGSLCPSHVMKAVIEQMGLKELT 335
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYG TE+S +T T D + E Q VG+ PH+E+K+
Sbjct: 336 IAYGQTESSPVIT-QTRTDDSFERRVQ-------------------TVGRALPHIEVKIT 375
Query: 378 SDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ G+ G + TRG HVM Y+ A V + WL TGD+ +D+ G V +
Sbjct: 376 APGTPDEVLRGEQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTGDLAEMDEDGYVKI 435
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
GR I GGENVYP+E+E VL HP I+ VVGI + E A +RL++
Sbjct: 436 TGRLKDMIIRGGENVYPKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGHT-- 493
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
++ E L +C+ + + +K P+ F + + +P+T++GKI++ +++
Sbjct: 494 --------------VTIETLTSYCQSQ-MARYKIPKYFFITDE-YPMTASGKIQKFRLKK 537
Query: 552 EVMSHLKS 559
+ + +K
Sbjct: 538 QALDLIKE 545
>gi|347751997|ref|YP_004859562.1| AMP-dependent synthetase/ligase [Bacillus coagulans 36D1]
gi|347584515|gb|AEP00782.1| AMP-dependent synthetase and ligase [Bacillus coagulans 36D1]
Length = 541
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 256/541 (47%), Gaps = 69/541 (12%)
Query: 38 FVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL--AVAFIGGIVAPLNYRWSFKE 95
+QDV + A L G++ GD +A+S N WY ++ A A IG I+ P+N + E
Sbjct: 53 LLQDVDHFANVLAAKGVKKGDRIAVSLPN--WYEAAVIYFAAAKIGAILVPINPLYKSHE 110
Query: 96 ASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK 155
+ + PV+L+ ES LE SL+W + S + + D
Sbjct: 111 LEYILDNAAPVLLIASES-----LEKNLGFQQSLQW---VKESITVRFPLMGFPSFDEYT 162
Query: 156 G--YSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGED 212
G S RS+ T A I +TSGTTG PKGV+I+H A +VQS IA ++ +
Sbjct: 163 GGAASYRSVQKTKIDADNDVFCILYTSGTTGKPKGVMITHRA-VVQSARTIASVLKCTDQ 221
Query: 213 DVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMA 271
D ++ +APL HI GL+ + + + GA + KF ++ L+ +EQ +T VP +
Sbjct: 222 DAFIISAPLFHIFGLAINLVCAISAGARILLQEKFRAEQTLKLIEQESITVQQGVPTMFL 281
Query: 272 DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE--TSSSL 329
+ ++ S++ + G +P +KE +L ++G+TE T +S
Sbjct: 282 KQLEVENLENY--NLSSLRTGIVGASPIPPNKVKEIREKM-GMELNQSFGITEAVTVTST 338
Query: 330 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----- 384
TF D LE +G+P P VELK+ +D V
Sbjct: 339 TFEDDEDKILE-----------------------ILGRPIPGVELKIVNDKRETVPHGVV 375
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 444
G I R VM Y+ V E W TGD+G +D+ G + VGR+ I GG
Sbjct: 376 GEIAVRSFAVMKGYYKMPEQTDQVLDSEGWFYTGDLGMLDEDGYLKFVGRKKEMIIRGGF 435
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 504
N+YP+E+EAVL +HP I+ V+G + L E+V A +RL+E ++C
Sbjct: 436 NIYPQEIEAVLSKHPYILESAVIGFPDEVLGEIVCAVIRLKEG-----ADC--------- 481
Query: 505 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM-SHLKSLPSN 563
S E + + +E + +K P+ +L+ + FP T++GKI++ +R +++ + ++S P +
Sbjct: 482 --SEEDILTYLKEW-IAIYKVPQR-ILFTQDFPTTASGKIQKVRLREQLLKTAVQSNPKS 537
Query: 564 L 564
L
Sbjct: 538 L 538
>gi|295835793|ref|ZP_06822726.1| AMP-binding enzyme [Streptomyces sp. SPB74]
gi|295825696|gb|EFG64403.1| AMP-binding enzyme [Streptomyces sp. SPB74]
Length = 544
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 256/563 (45%), Gaps = 73/563 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L+RI A R ++V + R T F + V LARGLL G+ GD V I A+N
Sbjct: 26 IGENLARIIAAHPDREALVEVASGRRWTYAAFGEAVELLARGLLARGVLKGDRVGIWAVN 85
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD----ESSDSWYL 119
S EW+L A A +G ++ +N + E + +LV ++ ++
Sbjct: 86 SA---EWVLLQYATARVGALLVNINPAYRAHELGYVLRQSGTQLLVASLRHRDTDYRAFV 142
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIIC 177
+ A P LR V +G S D ++TA D+ + LR+ S + V +
Sbjct: 143 DEVRPACPELREAVYIGDPSWDA-----LVTAGTDVPRA-RLRAREAELSC--DDPVNLQ 194
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
+TSGTTG PKG +SH L+ +GY E D P H G+ +
Sbjct: 195 YTSGTTGFPKGATLSHHNLLNNGFWVGETIGYTEHDRVCLPVPFFHCFGMVMGNLGATSH 254
Query: 237 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GAC V P F++++ LEAVE+ TSL VP + +A L S++ +
Sbjct: 255 GACVVIPAPAFDARATLEAVEKERCTSLYGVPTMF--IAELNLPDFASFDLTSLRTGIMA 312
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK +++ YGMTETS ++ T D LE
Sbjct: 313 GSPCPVEVMKRVVAEMHMSEVSICYGMTETSP-VSCQTRADDDLE--------------- 356
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSV 408
H+ VG+ PH+E+KV S G + TRG VML YW D +V
Sbjct: 357 --HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEAV 412
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
G W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG
Sbjct: 413 DPGR-WMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLHTHPKISDVQVVG 471
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-R 527
+ +AR E V+ACV R+ + + + +R CR++ L +K P R
Sbjct: 472 VPDARYGESVLACVIPRDPAEAP---------------TLDEIRAFCRDR-LASYKIPSR 515
Query: 528 LFVLWRKPFPLTSTGKIRRDEVR 550
L VL FP+T +GK+R+ E+R
Sbjct: 516 LEVL--GSFPMTVSGKVRKIELR 536
>gi|384179904|ref|YP_005565666.1| acyl-CoA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324325988|gb|ADY21248.1| acyl-CoA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 496
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 247/556 (44%), Gaps = 73/556 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A + ++ ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITDEEEMTYKQLHEYVNKVAAYFIYDLHVQKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIDNFEEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T +V+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQAVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
N + L +GMTETS ++ ++ D + +
Sbjct: 284 FIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP E ++ + + VG +L RG +VM YW++ A K ++ G WL TGD
Sbjct: 320 GKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRLDATKEAIQDG--WLYTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG----------- 426
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
R+ +W E+ K +L+ + + +HCR L +K P+ V + FP
Sbjct: 427 -----RQHGKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIPKEIVFLEE-FPKN 479
Query: 540 STGKIRRDEVRREVMS 555
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLANQLKS 495
>gi|126435503|ref|YP_001071194.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
gi|126235303|gb|ABN98703.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 491
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 233/522 (44%), Gaps = 64/522 (12%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
QF + + ++A G + GD +A+ A NS Y AV G ++ +N R E
Sbjct: 32 QFDRQIRSVA-GWVATHSEPGDRIAVIADNSTAYARLYYAVPRAGRVLTLVNQRLRADEQ 90
Query: 97 SRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK- 155
+ P +++ D++ EL+ + +PS+R ++ GS LTA+ +
Sbjct: 91 YTQLALTEPTVVIGDQTYVDALTELR-SQVPSVRHVIAAGSPE---------LTAEPGEP 140
Query: 156 GYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVY 215
G + + APE + FTSG+TG+PKGVV SH +++ + VY
Sbjct: 141 GVDV-------ACAPEDPAWLLFTSGSTGTPKGVVHSHRSILAAVQGSVIGRAVPRGGVY 193
Query: 216 LHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
L P+CHI G + + V A V +F + + + VT+ P ++ A
Sbjct: 194 LLPFPMCHIAGYN-MLVQHAVAATVVLAAQFRADAIARTINDCAVTACSLAPTMLH--AL 250
Query: 276 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
L ++ T +++ I G +P+EL++ A YGMTET ++TF+
Sbjct: 251 LDHLRATGATLPTLRSIAYGSAAIPAELLRTALERL-DVDFHQGYGMTETGGNVTFLG-- 307
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVM 395
PG + H G+P PHVE+++ DG IL RG V
Sbjct: 308 ------PGDHRRGLAG------HPAILAGAGRPHPHVEVRIGDDGE-----ILVRGPQVA 350
Query: 396 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
YW S GE WL TGDIG ID GN+++V RR + +GGENV EVE VL
Sbjct: 351 TSYWRGR----SAVDGEGWLATGDIGRIDADGNLYVVDRRRDIVVTGGENVSSREVEDVL 406
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
HP + VVG+ + E V A V E +ES L +H
Sbjct: 407 TDHPEVESAAVVGVPDEYWGEAVCAVVVAAEGRHPTES----------------ALVEHV 450
Query: 516 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
R + LTGFK PR VL+ PLT+ GKI ++ VRR S L
Sbjct: 451 RAR-LTGFKRPR-HVLFVDALPLTTNGKIDKNRVRRLARSAL 490
>gi|429505407|ref|YP_007186591.1| AMP-binding protein [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429486997|gb|AFZ90921.1| AMP-binding domain protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 546
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 253/565 (44%), Gaps = 70/565 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV T +F Q A+GL+++G+ GD VAI A N +L A A I
Sbjct: 23 REAVVYPERGLRYTYAEFDQLCRQTAKGLMKLGVEKGDHVAIWASNIPEWLAAQFATAKI 82
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL---------- 129
G ++ +N + E + S +++ D + Y+E+ + IP L
Sbjct: 83 GAVLVTINTNFQIAELDYLLAHSDVSALIIMDSYRQTSYVEIVNKLIPELKTCERGRLRS 142
Query: 130 ------RWHVSLGSSSSDFVNKRDML--TADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
R + +G S +++ D L A+ + +L S + + + +TSG
Sbjct: 143 KRYPFLRTVLYIGDKSPPGMHRWDSLLDNAEAVTDAALDGR--MDSLKKDDCIHMQYTSG 200
Query: 182 TTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGAC 239
TTG PKGV++SH IV + A IA + D P H G + +A + GA
Sbjct: 201 TTGFPKGVMLSHFN-IVNNAANIAECMKLTSSDRLCIPVPFFHCFGCVLGVLACVSAGAA 259
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
+ I +F + L+ VEQ T+L VP + +A L + + V+ + G
Sbjct: 260 MIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRTGIMAGSPC 317
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P+E+M+E + AYG TE S +T T D + E +
Sbjct: 318 PAEVMREVIGKMGMTDITIAYGQTEASPVIT-QTRTDDSFERRVE--------------- 361
Query: 360 PQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
G+ PH+E+++ G+S G + TRG HVM Y+ A +
Sbjct: 362 ----TAGRALPHIEVRIVRPGTSGEAARGEQGELCTRGYHVMKGYYKNQEATEEAIDKDG 417
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + + VVG+ + +
Sbjct: 418 WLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQVVGVPDPK 477
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E A +RL++ Q++ S+E +R C+E ++ +K PR +VL+
Sbjct: 478 YGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-HIARYKVPR-YVLFT 519
Query: 534 KPFPLTSTGKIRRDEVRREVMSHLK 558
+P+ +GKI++ ++R + + LK
Sbjct: 520 DEYPMAVSGKIQKFKLREKTIEELK 544
>gi|333977920|ref|YP_004515865.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821401|gb|AEG14064.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 554
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 265/590 (44%), Gaps = 80/590 (13%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNR--HNTGQQFVQDVLNLA-RGLLEIGLRSG 57
M + Q I L R AA+ ++ + +R T QF +++ NLA RGL+ +G++ G
Sbjct: 1 MDRFDQITIGDLLDRTAALYPDNEALVYTDRGLRYTYHQF-RELCNLAARGLMALGIKRG 59
Query: 58 DIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDS 116
+ +A+ A N ++ A A IG ++ +N + +E + S +L+ + + +S
Sbjct: 60 EHIALWATNVPQWVVLQFASAKIGAVLVTVNTNYKVRELEYLLRQSDATTLLLINGTKES 119
Query: 117 WYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA------- 169
Y+E+ H P L H G ++ K ML + + G P ++W
Sbjct: 120 NYVEMLHELCPELN-HCLPGRLNA---KKFPMLRSVVFIGDE--EHPGMYTWEQVLGMAE 173
Query: 170 ---------------PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDV 214
P+ + + +TSGTTG PKGV+++H L++ + + + +G D
Sbjct: 174 AISEQELAARQASLDPDDVINMQYTSGTTGFPKGVMLTHRNLVMNAKSVAECLNFGPRDR 233
Query: 215 YLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
P H G + + ++ GA V + F LE VE+ T+L VP + +
Sbjct: 234 LCIPVPFFHCFGCVLGTLTCVVSGATMVPLESFNPVRVLETVEKERCTALHGVPTMF--I 291
Query: 274 ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
L ++K S++ + G P E+MK + +++ YG TE S +T MT
Sbjct: 292 TELEVLEKQPFDTSSLRTGIMAGAPCPIEVMKAVVDRMGMKEIVITYGQTEASPGIT-MT 350
Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRI 387
D LE + VG+ P VE+KV + + G I
Sbjct: 351 RTDDPLEI-------------------RVSTVGRALPGVEVKVVDPATGEEVPRGYQGEI 391
Query: 388 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
RG +VM Y+ A S E WL TGD+G +D+ G V + GR I GGEN+Y
Sbjct: 392 CARGYNVMKGYYKMPEATASTIDREGWLHTGDLGIMDEQGYVRITGRIKDMIIRGGENIY 451
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 507
P E+E L HP I + VVG+ +++ E V+A ++L+E +
Sbjct: 452 PREIEEFLHTHPKIKDVQVVGVPSSKYGEEVMAFIQLKEGCT----------------AT 495
Query: 508 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+E +R+ C K + +K P+ ++ + +P T+ GK+++ ++R + + L
Sbjct: 496 AEEIREFCNGK-IARYKIPQ-YIQFVSSYPTTANGKVQKFKLREQAIREL 543
>gi|108799860|ref|YP_640057.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119868970|ref|YP_938922.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
gi|108770279|gb|ABG09001.1| AMP-dependent synthetase and ligase [Mycobacterium sp. MCS]
gi|119695059|gb|ABL92132.1| AMP-dependent synthetase and ligase [Mycobacterium sp. KMS]
Length = 491
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 233/522 (44%), Gaps = 64/522 (12%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
QF + + ++A G + GD +A+ A NS Y AV G ++ +N R E
Sbjct: 32 QFDRQIRSVA-GWVATHSEPGDRIAVIADNSTAYARLYYAVPRAGRVLTLVNQRLRADEQ 90
Query: 97 SRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK- 155
+ P +++ D++ EL+ + +PS+R ++ GS LTA+ +
Sbjct: 91 YTQLALTEPTVVIGDQTYVDALTELR-SQVPSVRHVIAAGSPE---------LTAEPGEP 140
Query: 156 GYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVY 215
G + + APE + FTSG+TG+PKGVV SH +++ + VY
Sbjct: 141 GVDV-------ACAPEDPAWLLFTSGSTGTPKGVVHSHRSILAAVQGSVIGRAVPRGGVY 193
Query: 216 LHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
L P+CHI G + + V A V +F + + + VT+ P ++ A
Sbjct: 194 LLPFPMCHIAGYN-MLVQHAVAATVVLAAQFRADAIARTINDCAVTACSLAPTMLH--AL 250
Query: 276 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
L ++ T +++ I G +P+EL++ A YGMTET ++TF+
Sbjct: 251 LDHLRATGATLPTLRSIAYGSAAIPAELLRTALERL-DVDFHQGYGMTETGGNVTFLG-- 307
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVM 395
PG + H G+P PHVE+++ DG IL RG V
Sbjct: 308 ------PGDHRRGLAG------HPAILAGAGRPHPHVEVRIGDDGE-----ILVRGPQVA 350
Query: 396 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
YW S GE WL TGDIG ID GN+++V RR + +GGENV EVE VL
Sbjct: 351 TSYWRGR----SAVDGEGWLATGDIGRIDADGNLYVVDRRRDIVVTGGENVSSREVEDVL 406
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
HP + VVG+ + E V A V E +ES L +H
Sbjct: 407 TDHPEVESAAVVGVPDEYWGEAVCAVVVAAEGRHPTES----------------ALIEHV 450
Query: 516 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
R + LTGFK PR VL+ PLT+ GKI ++ VRR S L
Sbjct: 451 RAR-LTGFKRPR-HVLFVDALPLTTNGKIDKNRVRRLARSAL 490
>gi|414153677|ref|ZP_11409999.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454698|emb|CCO07903.1| short chain acyl-CoA synthetase, anaerobic [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 554
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 265/587 (45%), Gaps = 74/587 (12%)
Query: 1 MANYSQAHICQCLSRIAAVKRN--SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGD 58
M + I L R+AA + + ++V N + +QF + +A+GL+ +G++ G+
Sbjct: 1 MQELDRITIGALLDRVAAAQPDHEALVYSERNLRYSYRQFNELCRKVAKGLMALGIQKGE 60
Query: 59 IVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEAS---RAITSIRPVMLVTDESSD 115
+A+ A N ++ A +G ++ +N + E + S VM+ ++SD
Sbjct: 61 HIAVWATNVPEWVTLQFATGKMGAVLVTVNTNYKTFELEYLLKQSDSTTLVMISGTKTSD 120
Query: 116 SWYL--------------ELQHTAIPSLRWHVSLGSSSSD-FVNKRDMLT-ADILKGYSL 159
+ +LQ +P L+ + +G + +N +D+LT AD + L
Sbjct: 121 YIKMVNELCPELADCPPGQLQSARLPLLKNIIFIGDKTPPGMLNWQDLLTLADQVTDEEL 180
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 219
+ S P+ + + +TSGTTG PKGV+++H ++ + + + +G D
Sbjct: 181 DAR--QASLDPDDVINMQYTSGTTGFPKGVMLTHFNIVNNAHSIANCMAFGPRDRLCIPV 238
Query: 220 PLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 278
P H G + M ++ GA V + F LE +E+ T++ VP + + L
Sbjct: 239 PFFHCFGCVLGTMTCVVSGATMVPLEVFHPVKVLETIEREKCTAVHGVPTMF--IMELEE 296
Query: 279 VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 338
+ K S++ + G P E+MK N ++ YG TE S ++T + DP
Sbjct: 297 MNKRNYDTGSLRTGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRIEDPI 356
Query: 339 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTR 390
+ + VG+ P+VE K+ C G G I+ R
Sbjct: 357 --------------------ELRVTTVGRVIPNVEAKIVDPETGEDCPPGVQ--GEIVAR 394
Query: 391 GAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 450
G +VM Y+ A E WL TGD+G +D+ G + GR I GGEN+YP E
Sbjct: 395 GYNVMKGYYKMPEATAQAIDREGWLHTGDLGIMDEKGYFKITGRLKDMIIRGGENIYPRE 454
Query: 451 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 510
+E L HP I + V+G+ + + E V+A ++LRE + L+ E
Sbjct: 455 IEEFLYTHPAIKDVQVIGVPSLKYGEEVLAYIQLREGYS----------------LTKEE 498
Query: 511 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
++ +C++K + +K P +VL+ +P T++GKI++ ++R + +S L
Sbjct: 499 VQAYCKDK-IAKYKIPS-YVLFTDSYPTTASGKIQKFKLREQAISTL 543
>gi|407790159|ref|ZP_11137255.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
gi|407205174|gb|EKE75150.1| AMP-binding domain protein [Gallaecimonas xiamenensis 3-C-1]
Length = 558
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 162/546 (29%), Positives = 240/546 (43%), Gaps = 68/546 (12%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
Q ++ V LA LL +G+ GD V I A N +L A A +G I+ +N + E
Sbjct: 51 QLLEQVDRLAISLLRLGIEKGDRVGIWAPNCYQWLLVQFATARLGAIMVCINPNYQKSEL 110
Query: 97 SRAITSIRPVMLVTDES-SDSWYL--------ELQHT---------AIPSLRWHVSLGSS 138
+ A+ ++ L+ E S YL EL HT A+PSLR +++G +
Sbjct: 111 AYALNKVQCKALICAEGFRQSNYLAMLEALAPELAHTHSGAELDAQALPSLRHIITMGKA 170
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
++ D L D+ S +L +P+ + I FTSGTTG+PKG +SH ++
Sbjct: 171 RPGYL-AFDWLMGDLTAEDS--ALLDALDLSPQDPINIQFTSGTTGNPKGATLSHHNILN 227
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVE 256
+ +G D PL H G+ ++ + GA VF + F++ S L+AV
Sbjct: 228 NAKLVGDAMGMSPADKLCIPVPLYHCFGMVLGSLLCVAHGATAVFPAEAFDADSTLKAVS 287
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ T+L VP + +A L + S++ + G P ELMK+ ++
Sbjct: 288 EERCTALHGVPTMF--IAELEHPQFDQFDLTSLRTGVMAGATCPVELMKKVIGKLHMEEV 345
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
+ AYG TE SS + +TL D LE + G V GK H E+K+
Sbjct: 346 LIAYGQTE-SSPINHITLRDDPLE------KRIGTV-------------GKAGAHQEVKI 385
Query: 377 CSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
V G I R VML YWD + WL +GD+G +D G V +
Sbjct: 386 VDAFGDEVPLGERGEICNRAYSVMLGYWDDPQKSAETVDQDGWLHSGDLGVMDQDGYVQV 445
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
VGR I GGEN+YP E+E +HP + I V GI + + E V A V LR Q
Sbjct: 446 VGRIKDMIIRGGENIYPREIEEFYYRHPKVQDIQVFGIPDDKYGEQVCAWVMLRSGQQ-- 503
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+E +R E L+ FK PR F +P+T TGKI++ +R
Sbjct: 504 --------------ADAEEMRAFA-EGELSHFKIPRHFHFVDN-YPMTVTGKIQKFRMRE 547
Query: 552 EVMSHL 557
++ L
Sbjct: 548 LMLQSL 553
>gi|329895575|ref|ZP_08271071.1| Long-chain-fatty-acid--CoA ligase [gamma proteobacterium IMCC3088]
gi|328922254|gb|EGG29604.1| Long-chain-fatty-acid--CoA ligase [gamma proteobacterium IMCC3088]
Length = 522
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 163/556 (29%), Positives = 252/556 (45%), Gaps = 60/556 (10%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I Q + A + N + IT + Q LNLA+ LL G+ SG+ + + NS
Sbjct: 3 IHQAIDYHARRRPNQLALITDSTQYDYHSLQQRSLNLAQALLAQGVNSGERIGLLGQNSI 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
++ A + IG + PLNYR + E + +++ E S +E AI
Sbjct: 63 DHMVAFTACSRIGAVSVPLNYRLAPPETAYVCDDANIRLILILEPS----VEALAYAIAD 118
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT--HSWAPEGAVIICFTSGTTGSP 186
R S+ SD LTA +L+ +S P + + + A + +TSGTTG P
Sbjct: 119 ARDGESV--FMSDLNESHLPLTAAMLE---TQSPPISSPDDLSEQHATLQLYTSGTTGKP 173
Query: 187 KGVVISHSAL--IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
KGV +SH L ++ +L+ G D + L AP+ HIGG S + L+ G V
Sbjct: 174 KGVALSHRNLSALMNNLSNANPGVLGVDGMDLVCAPMFHIGGAGSTIVPLLCGGAVVMHE 233
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSE 302
F K+ LEA+++H + + VPA+ + +L+R + D S+ I G +
Sbjct: 234 AFNPKAVLEAIQKHRIREMFMVPAM---ILSLLRDVPNFDQYDLSSLDVIGYGAAPISPT 290
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMT--LYDPTLETPGQLPQAFGNVTPNSVHQP 360
L+KEA F K YGMTET ++ ++ ++ L+ +L QA G
Sbjct: 291 LLKEAVERF-KCGFNQYYGMTETCGTVVALSPEVHQRALQGEPELLQAAGQT-------- 341
Query: 361 QGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
C+G VE KVC V G I R A+ ML Y++ A G W+
Sbjct: 342 ---CLG-----VEAKVCDSTGVEVPMGETGEIWLRSANNMLHYFNLPEATAKTLVGG-WV 392
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD G I++ G ++L R + SGGEN+YP EVE VL Q PG+ V+G+ + +
Sbjct: 393 LTGDAGYINEEGFIFLRDRIKDMVLSGGENIYPVEVENVLAQLPGVRETAVIGVPDEKYG 452
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E ++A + + E + S++ + CR+K L G+K PR +
Sbjct: 453 EALLAFIAMNEGFTPP---------------STQEMIDFCRDK-LAGYKIPRKLEII-DA 495
Query: 536 FPLTSTGKIRRDEVRR 551
P TGKI++ +R
Sbjct: 496 LPRNPTGKIQKMVLRE 511
>gi|452975963|gb|EME75780.1| AMP-binding domain protein [Bacillus sonorensis L12]
Length = 545
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 156/560 (27%), Positives = 252/560 (45%), Gaps = 67/560 (11%)
Query: 24 VVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGI 83
V T G R+ T QQF Q A+GL+ +G++ G+ +AI A N +L A A IG +
Sbjct: 27 VYTGLGLRY-TYQQFDQLCRKAAKGLMALGIQKGEHIAIWASNRPEWLTVQFAAAKIGAV 85
Query: 84 VAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD- 141
+ +N + E + S +L D + Y ++ + +P LR + G SD
Sbjct: 86 LVTVNTNYQLSELEYVLKQSDSTTLLFMDSYRGTSYTDILYELLPELR-NSKAGELKSDR 144
Query: 142 ---------FVNKRD---MLTADILKGYSL---RSLPFTHSWAPEGAVI-ICFTSGTTGS 185
F R L D+L+ SL + L + E VI + +TSGTTG
Sbjct: 145 LPFLKHIMLFGKNRKPGMYLWEDLLEKASLTSEKELEERMASLNEHDVINMQYTSGTTGF 204
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIP 244
PKGV+++H L ++ + +D P H G + +A + VGA V +
Sbjct: 205 PKGVMLTHYNLANNAVNIAECMNLTANDRMCIPVPFFHCFGCVLGNLACVTVGATMVPVQ 264
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
+F + L+ VE T+L VP + +A + S++ + G P+E+M
Sbjct: 265 EFSPREVLKTVESERCTALHGVPTMF--IAEMNDEDFASYNLSSLRTGIMAGSNCPTEVM 322
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K +++ AYG TE S +T ++D + +
Sbjct: 323 KGVIEKMGISEITIAYGQTEASPVITQTRVHDSL--------------------KRRVET 362
Query: 365 VGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VG+ PH+E+K+ D + V G + TRG HVM Y+ A + E +L TG
Sbjct: 363 VGRALPHIEVKITDPDNNREVERGRQGELCTRGYHVMKGYYKNPQATAAAIDDEGFLHTG 422
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ +DD G + GR I GGEN+YP E+E L QHP I+ + VVG+ + E V
Sbjct: 423 DLAVMDDDGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPKILDVQVVGVPDETFGEEV 482
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A ++L KN E + E+ R++C+ K + +K PR V++ FP+
Sbjct: 483 SAWIKL---------------KNGEHATAEEI-REYCKGK-IARYKIPR-HVVFVDEFPM 524
Query: 539 TSTGKIRRDEVRREVMSHLK 558
T++GK+++ ++R + K
Sbjct: 525 TASGKVQKFKLREQAHEMFK 544
>gi|183983827|ref|YP_001852118.1| AMP-binding protein [Mycobacterium marinum M]
gi|183177153|gb|ACC42263.1| fatty-acid-CoA ligase FadD35 [Mycobacterium marinum M]
Length = 547
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 243/567 (42%), Gaps = 93/567 (16%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R+++V + R + Q + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 RDALVDVRSGRRWSYAQLLTDVRQLATGLVRAGIGRGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL---------ELQHTA 125
A IG ++ +N + +E A+ M++ + SD + EL A
Sbjct: 99 AEIGAVLVTINPAYQARELEYALRQSGVAMVIAASGFKGSDYAAILAEVAPGCPELHDVA 158
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
L S +D V +++ T + + + + I +TSGTTG
Sbjct: 159 FLDGDGWAKLAGSGADLVALQEIAT----------------TLSADDPINIQYTSGTTGF 202
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-I 243
PKGV +SH ++ ++ Y +D P H G+ +A GAC V
Sbjct: 203 PKGVTLSHRNILNNGYLVGELLEYTAEDRICIPVPFYHCFGMVMGNLAATSHGACMVIPA 262
Query: 244 PKFESKSALEAVEQHCVTSLITVPAI------MADLATLIRVKKTWKGRDSVKKILNGGG 297
P F+ + L AV+ TSL VP + +AD AT S++ + G
Sbjct: 263 PGFDPAATLRAVQAERCTSLYGVPTMFIAELGLADFATY--------DLSSLRTGIMAGS 314
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+M++ + A + YGMTETS T N
Sbjct: 315 TCPVEVMRKVIDQMHMAGISICYGMTETSPVAT--------------------QTRSNDS 354
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTG 411
Q + VG+ PH+E+KV + + G TRG VM YW V
Sbjct: 355 LQRRVTTVGRVGPHLEIKVVDPATGRIVPRGTAGEFCTRGYSVMSGYWKAPERTAEVIDP 414
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
E W+ TGD+ +D+ G V + GR + GGEN+ P E+E L HP I+ VVG+ +
Sbjct: 415 EGWMHTGDLALMDECGYVQITGRIKDIVVRGGENISPREIEEFLHSHPDIVDAHVVGVPD 474
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
R+ E ++A V+LR L++ +LR++C + FK PR L
Sbjct: 475 ERMGEELMAVVKLRAGAPE---------------LTTGLLREYC-AGQIAKFKIPRYLRL 518
Query: 532 WRKPFPLTSTGKIRRDEVRREVMSHLK 558
+ FP+T TGK+R+ E+R++ + +L+
Sbjct: 519 VDE-FPMTVTGKVRKVEMRQQAIEYLR 544
>gi|242010698|ref|XP_002426097.1| firefly luciferase, putative [Pediculus humanus corporis]
gi|212510130|gb|EEB13359.1| firefly luciferase, putative [Pediculus humanus corporis]
Length = 582
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 168/580 (28%), Positives = 259/580 (44%), Gaps = 90/580 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAF 79
R ++V+ N+ T Q+ + A GLLE G+ GD V I + NS EWY+ A A
Sbjct: 56 RTAIVSCYQNKRITYQEVKEQAEAFACGLLETGVVPGDRVGIWSQNSAEWYI-ISFACAK 114
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESS------------DSWYL-----ELQ 122
G I LN + +E + ++ +L+ +S DS +L +L+
Sbjct: 115 AGFISVYLNPAYRSEELKHCLRAVGVKVLIAADSFKNLNYFDILRKIDSNFLNGEAGQLK 174
Query: 123 HTAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+P L+ V++ SS +D V K D L+ S S PE V
Sbjct: 175 SDVLPELKSIVNISDSSISSFYSFNDIVKKCTGNAKDELRKIS-------KSLGPEEPVN 227
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD-VYLHTAPLCHIGGLSSAMAML 234
I FTSGTTGSPKG V+SH ++ S + E + PL H L S +AML
Sbjct: 228 IQFTSGTTGSPKGAVLSHFNIVNNSYCISRRQEFHEKHHIVCFMGPLFH--ALGSVVAML 285
Query: 235 MVGACH----VFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 288
G H + IP F A+EA+ Q T L+ P + D+ +++ K+ D+
Sbjct: 286 --GCVHEGLTLVIPTTAFSPTKAVEAIVQEKCTVLVGTPTMFIDVVKIVKQKEL--KIDT 341
Query: 289 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 348
V+ ++GG + L + F ++ S YG+TET ++FM+
Sbjct: 342 VELAISGGAYTSTVLFSDMIEYFKVKRVSSVYGLTETGP-VSFMS--------------- 385
Query: 349 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 403
N + Q VG HVE KV D + G + RG ++M YW
Sbjct: 386 ----QVNDDREKQLTTVGCLMEHVEAKVVDDNGKTLPWNTPGELWVRGYNIMKGYWSLKE 441
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
T E WL TGD + + G +VGR+ I GGEN+YP ++E L HP I+
Sbjct: 442 KTKETITPERWLKTGDQFVLLENGYGKIVGRKKDLIIRGGENIYPADIEEFLSTHPDILE 501
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
VVG+ + RL E V AC+RL+ + L+ E +++ C+ K + F
Sbjct: 502 AQVVGLPDPRLGEQVCACIRLKPN----------------SFLTEEEVKEFCKGK-IADF 544
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 563
K P +V + FP+T + K+++ +++++ + H K L SN
Sbjct: 545 KIP-YYVWFVDKFPITPSAKVQKYKLQQDAIKHFK-LESN 582
>gi|403340800|gb|EJY69695.1| Long-chain-fatty-acid--CoA ligase [Oxytricha trifallax]
Length = 542
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 250/547 (45%), Gaps = 71/547 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F + V LA+GL+ +GL GD + I A N +EW L A A I+ +N +
Sbjct: 13 TYEEFNKKVDTLAKGLIALGLNRGDRIGIYAQNKAEWTL-LQFAAARADLILVNVNPAFQ 71
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRWH---VSLGSSS--------- 139
E + A+ + +++TD S Y+++ IP L+ + LG+
Sbjct: 72 QSELTYALQKVGIKTLVMTDSFKSSNYVKIVQDIIPELQTTKNPLDLGNLKEFPDLKNIV 131
Query: 140 --SD-----FVNKRDMLTA-DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
SD +N D+ + D Y L+ ++ E I FTSGTTG PKG +
Sbjct: 132 LISDKKVQGMINFNDLESLFDSNDEYELQKRESNINF--ESPTNIQFTSGTTGYPKGATL 189
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESK 249
SH ++ + + Y +D + + PL H G+ + + GA V+ + F+ K
Sbjct: 190 SHFNILNNAYFVGQGMKYTPNDKIMISVPLYHCFGMVIGNLCAINFGATMVYPSEGFDPK 249
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ +EA+ Q+ TS+ VP + + K +++ G G+P L+ T+
Sbjct: 250 ATMEAITQYQGTSMYGVPTMFIAMLEEYAKNKEKYNISTLRTGFISGSGVPEVLVNRITS 309
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
F +L YG TE S +T T DP + + VGK
Sbjct: 310 EFGLHELTHGYGQTECSPVVTMSTANDPLAK--------------------KAKTVGKTL 349
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+ELK+ + S G + RG VM Y++ + W+ TGD+G
Sbjct: 350 PHIELKIINPESGETMKWGEPGEVCARGYVVMTGYFNDAKRTQEAVCPKGWIRTGDLGQF 409
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G + ++GR I GGEN+YP+E+E ++HP + + VVG+++ + E V A ++
Sbjct: 410 DDDGFLKIIGRSKDMIIRGGENIYPKEIEEYFMKHPNVSDVQVVGVSDELMGEEVCAWIK 469
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+ES + + +E L +C+ + ++ +K PR ++ FPLT TGK
Sbjct: 470 LKESGKTTP---------QEFL-------DYCKGQ-ISHYKIPR-YIRIVDSFPLTVTGK 511
Query: 544 IRRDEVR 550
++++E+R
Sbjct: 512 VKKNEMR 518
>gi|427430670|ref|ZP_18920432.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
gi|425878639|gb|EKV27353.1| Acetoacetyl-CoA synthetase [Caenispirillum salinarum AK4]
Length = 566
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 242/550 (44%), Gaps = 68/550 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T + + V +A G L +GL GD V I S N+EW L A A G ++ +N +
Sbjct: 55 TYAEMKRRVDEIAAGFLALGLEPGDRVGIWSPNNAEWALTQ-FATAKAGLVLVNINPSYR 113
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYL--------ELQHTA--------IPSLRWHVSL 135
E A+T + +++ DE S Y+ EL H +P L+ V +
Sbjct: 114 LAELEYALTKVECKALVLADEFKTSNYIDMVRKLAPELDHCPPGALKAERLPDLKAVVHI 173
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G+ + L + R + + I FTSGTTG PKG ++H
Sbjct: 174 GNDHIHGMYAFKELYEMAEDSHRARVAELAEKLQFDDPINIQFTSGTTGFPKGATLTHHN 233
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSALE 253
++ + G D PL H G+ + + GA V+ + F+ + LE
Sbjct: 234 ILNNGFFVAEAIRLGHGDRLCIPVPLYHCFGMVMGNLGCVTHGATMVYPGEAFDPLAVLE 293
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
VE+ T L VP + +A L + S++ + G P E+MK
Sbjct: 294 TVEREKCTGLYGVPTMF--IAQLDHPEFKSFNLSSLRTGIMAGSPCPIEVMKRVIAEMNM 351
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ AYGMTETS ++F T D LE + VG+ PH+E
Sbjct: 352 EEVTIAYGMTETSP-VSFQTAADDELEA-------------------RVSTVGRVQPHLE 391
Query: 374 LKVCS-DGS----SHVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ DG G + TRG VML YW D+ + S+ + W+ TGD+ ++D+ G
Sbjct: 392 VKIVDLDGRIVPRGTAGELCTRGYSVMLGYWNDEEKTRESIDSAG-WMHTGDLATLDEHG 450
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+VGR + GGEN+YP E+E L +HP + + V+G+ + + E + AC+RLRE
Sbjct: 451 YCKIVGRIKDMVIRGGENIYPREIEEFLYRHPAVNDVQVIGVPDKKYGEELCACIRLREG 510
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ +E E +R+ C+ + +K PR ++ + FP+T TGK+++
Sbjct: 511 HEATE----------------EEIREFCK-GQIAHYKIPR-YIRFVDEFPMTVTGKVQKY 552
Query: 548 EVRREVMSHL 557
+R+ + L
Sbjct: 553 VMRKHIAEDL 562
>gi|300692553|ref|YP_003753548.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|299079613|emb|CBJ52291.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum PSI07]
gi|344168821|emb|CCA81133.1| long-chain-fatty-acid-CoA ligase [blood disease bacterium R229]
Length = 571
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 262/559 (46%), Gaps = 85/559 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T + F + V LA GL +GL+ G+ + I + N EW+L A A +G I+ +N
Sbjct: 57 TWRAFAEQVDALAAGLHALGLQRGERIGIWSPNR---YEWVLTQFATARLGLILVNINPA 113
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHV 133
+ E A+ + +V E+ S YLE LQ +P+LRW +
Sbjct: 114 YRLAELEYALNKVGCKAIVAAEAFKTSRYLEMLQTLAPELATAQPGALQAAKLPALRWVI 173
Query: 134 SLGSSSSD-FVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+G ++ +N +++ +G S +L T + +P+ A+ I FTSGTTG+PKG +
Sbjct: 174 RMGEGATPGTINFGEVMARG--QGVSTGTLDAITATLSPDDAINIQFTSGTTGAPKGATL 231
Query: 192 SHSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FES 248
+H ++ + +A+ G D + + PL H G+ S +A GAC VF + F+
Sbjct: 232 THVNIVNNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTATGACMVFPGEAFDP 290
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLPSELMK 305
+ L V + T+L VP + + ++ GR V + G G P E+MK
Sbjct: 291 LATLRTVAEERCTALHGVPTMF-----IAQLDHPEFGRFDVSSLRGGIMAGSPCPIEVMK 345
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
++ AYGMTETS P +F + + + + + V
Sbjct: 346 RVVAEMSLREITIAYGMTETS-------------------PVSFQSAVTDPLDK-RVTTV 385
Query: 366 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+ PH+++K+ DG+ V G + T+G VML YWD AK + S + W+ TGD
Sbjct: 386 GRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESIRDGWMRTGD 443
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ + D G +VGR + GGENVYP E+E L +HP + + V G+ + + E V
Sbjct: 444 LATFDVDGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVC 503
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + L+ Q +E E +R+ C+++ + +K PR ++ + P+T
Sbjct: 504 AWIVLKPGQQATE----------------EEIREFCKDQ-IAHYKIPR-YIRFVTEMPMT 545
Query: 540 STGKIRRDEVRREVMSHLK 558
TGK+++ +R ++ LK
Sbjct: 546 VTGKVQKFVMRERMIEALK 564
>gi|404401576|ref|ZP_10993160.1| AMP-binding domain protein [Pseudomonas fuscovaginae UPB0736]
Length = 560
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 252/572 (44%), Gaps = 82/572 (14%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW 69
Q ++R A +R ++V + + Q + V AR LL IG++ G+ + I A N +EW
Sbjct: 26 QTVARYA--EREALVVRHQHLRYSWAQLAEQVDRCARALLAIGMQPGERLGIWAPNCAEW 83
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAI---------------TSIRPVML--VTDE 112
+ A A +G I+ +N + E A+ TS ML + E
Sbjct: 84 CITQ-FASAKVGVILVNINPAYRVSELEYALKHAGCRWLICADAFKTSDYHAMLGELLPE 142
Query: 113 SSDSWYLELQHTAIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYSLRSLPFT 165
+DS L +P LR +SLG + + + + + + ++A+ L+ S + L F
Sbjct: 143 LADSTLGHLHSHLLPELRGVISLGRTPAAGMLGWAELLERAEAVSAEQLRACSAQ-LQF- 200
Query: 166 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 225
+ + I +TSGTTG PKG +SH ++ +G E D + PL H
Sbjct: 201 -----DEPINIQYTSGTTGFPKGATLSHYNILNNGYFVGESLGLTEHDRLVIPVPLYHCF 255
Query: 226 GLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
G+ + + P F+ +AL+AV + T L VP + +A L +
Sbjct: 256 GMVMGNLGCLTHGSTLIYPSDAFDPLTALQAVAEERATVLYGVPTMF--IAELDHPHRAE 313
Query: 284 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 343
+++ + G P E+MK A++ AYGMTETS T T D LE
Sbjct: 314 FDLSTLRTGIMAGATCPIEVMKRVIGEMHMAEVQIAYGMTETSPVST-QTAADDDLER-- 370
Query: 344 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRY 398
+ VG+ PH+E K+ + +G + TRG VML Y
Sbjct: 371 -----------------RVASVGRTQPHLESKIIDEAGRIVPRGEIGELCTRGYSVMLGY 413
Query: 399 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 458
W+ A G W+ TGD+ +D+ G V +VGR I GGENVYP E+E L +H
Sbjct: 414 WNNPEATAEALDGACWMHTGDLAVMDEAGYVSIVGRNKDMIIRGGENVYPREIEEFLFRH 473
Query: 459 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 518
P + + V+GI + R E +VA V+ C E E L+ C+ K
Sbjct: 474 PAVADVQVIGIPDERYGEEIVAWVK-----------CHPGHDADE-----EELKVFCKGK 517
Query: 519 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ FK PR F L+ + FP+T TGK+++ +R
Sbjct: 518 -IAHFKVPRHF-LFVEAFPMTVTGKVQKFRMR 547
>gi|387900866|ref|YP_006331205.1| long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
gi|387575758|gb|AFJ84474.1| Long-chain-fatty-acid--CoA ligase [Burkholderia sp. KJ006]
Length = 575
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 157/555 (28%), Positives = 251/555 (45%), Gaps = 80/555 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
++F +V LA GL+E+G+ GD V I + N SEW L A A IG ++ +N +
Sbjct: 62 REFAHEVDVLAAGLVELGIVKGDRVGIWSPNRSEWLLTQ-FATARIGAVLVNINPAYRLA 120
Query: 95 EASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSLGS 137
E A+ + ++ + S Y+E+ T +PSLR VS+G
Sbjct: 121 ELEYALNKVGCKAVIAAERFKSSAYVEMLQTIAPELASATPGDLHAARVPSLRTVVSMGD 180
Query: 138 -SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+ + D++ D L L ++ T A A+ I FTSGTTGSPKG ++H
Sbjct: 181 VAPAGMFRFADVMARGRDTLDAARLDAIGAT--LAAGEAINIQFTSGTTGSPKGATLTHR 238
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSAL 252
++ + + + + E D PL H G+ A +A + GA VF + F+ + L
Sbjct: 239 NVVNNARSIAMAMRFTEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATL 298
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
AV T+L VP + +A L + +++ + G P E MK +
Sbjct: 299 AAVADERCTALHGVPTMF--IAELDHPEFKTFDLSTLRTGIMAGSPCPIETMKRVVSQMH 356
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+++ AYGMTETS P +F + T + + + + VG+ PH+
Sbjct: 357 LSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRIQPHL 396
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIGSI 423
E+K+ G V G + T+G VML YWD T EV W+ TGD+ ++
Sbjct: 397 EVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDD-----DAKTREVLIDGWMHTGDLATL 451
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G +VGR + GGENVYP E+E L +HP I V G+ +A+ E + A +
Sbjct: 452 DGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGLPDAKYGEELCAWIV 511
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
LR Q +E + +R C + + +K PR ++ + P+T TGK
Sbjct: 512 LRAGEQMTEDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELPMTVTGK 553
Query: 544 IRRDEVRREVMSHLK 558
+++ +R ++ LK
Sbjct: 554 VQKFVMRERMIEELK 568
>gi|444305385|ref|ZP_21141168.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
gi|443482303|gb|ELT45215.1| AMP-dependent synthetase and ligase [Arthrobacter sp. SJCon]
Length = 559
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 241/542 (44%), Gaps = 64/542 (11%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASR 98
DV LARGLL +G+ G+ V I + N +EW L A A G I+ +N + E
Sbjct: 56 DDVDRLARGLLALGIGKGERVGIWSPNCAEWTL-LQYATAKAGAILVNVNPAYRSHELEF 114
Query: 99 AITSIRPVMLVTDESS-DSWYLELQHTAI---PSLRWHVSL---GSSSSDF----VNKRD 147
+ MLVT S +S Y+ + A+ P LR V L G D + +
Sbjct: 115 VVKQSGMRMLVTAPSDRNSDYVGMARQALAGCPDLRELVFLPAPGGEGPDGGVAPLGAAE 174
Query: 148 MLTADILKGY-SLRSLPFTHSWA---PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 203
+ A++LKG ++ T A P + + +TSGTTG PKG ++H ++ A
Sbjct: 175 LTYAELLKGADAVAHSALTARMAELDPHDPINLQYTSGTTGFPKGATLTHHNILNNGYAI 234
Query: 204 IAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVT 261
++GY E D + P H G+ + IP F +ALEAV+ T
Sbjct: 235 GELLGYTEHDRVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFSPAAALEAVQDFGGT 294
Query: 262 SLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYG 321
SL VP + +A L +++ + G P E+MK + + YG
Sbjct: 295 SLYGVPTMF--IAELALPDFATYDLSTLRTGVMAGSPCPVEVMKRVISDMHMKDVAICYG 352
Query: 322 MTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS 381
MTETS T MT TL+ H+ + VG+ P +E +V S
Sbjct: 353 MTETSPVST-MTRQGDTLQ-----------------HRTE--TVGRTMPRLESQVIDPAS 392
Query: 382 SHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 435
V G + TRG VM YW+Q V + W+ TGD+ +DD G V + GR
Sbjct: 393 GDVLERGEIGELCTRGYAVMAGYWNQPEKTAEVIDADGWMHTGDLALMDDDGYVVIEGRI 452
Query: 436 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 495
+ GGEN+YP E+E L HP I + V+G+ + + E ++AC+ L
Sbjct: 453 KDMVIRGGENIYPREIEEFLYTHPAIQDVQVIGVPDEKYGEELMACIIL----------- 501
Query: 496 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
K E L ++ + CR NL +K PR +V R FP+T +GKIR+ ++R+E +
Sbjct: 502 ----KPGEEPLDADAVAGFCR-GNLAHYKIPR-YVEVRDSFPMTVSGKIRKVQMRKEAVE 555
Query: 556 HL 557
L
Sbjct: 556 RL 557
>gi|302557512|ref|ZP_07309854.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
gi|302475130|gb|EFL38223.1| substrate-CoA ligase [Streptomyces griseoflavus Tu4000]
Length = 538
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 241/556 (43%), Gaps = 67/556 (12%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L+R A R ++V + R T +F V +ARGLL G+ +GD V I A+N
Sbjct: 25 LARTVAAWPDREALVDVASGRRWTYAEFGAAVDEVARGLLAKGITTGDRVGIWAVNCP-- 82
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL-ELQH 123
EW+L A A IG I+ +N + E + +LV+ + SD L E
Sbjct: 83 -EWVLVQYATARIGVIMVNINPAYRAHELEYVLKQSGISLLVSSLAHKGSDYRALVEQVR 141
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
A P LR V +G S D LT R + + V I +TSGTT
Sbjct: 142 GACPDLRETVYIGDPSWD------ALTGAAAAVPPERPDEIAAGLSCDDPVNIQYTSGTT 195
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ VGY E D P H G+ +A GAC V
Sbjct: 196 GFPKGATLSHHNILNNGYWVGRTVGYTERDRVCLPVPFYHCFGMVMGNLAATSHGACIVV 255
Query: 243 -IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
P F+ + LEAV++ TSL VP + +A L S++ + G P
Sbjct: 256 PAPSFDPAATLEAVQRERCTSLYGVPTMF--IAELNLPGFASYDLTSLRTGIMAGSPCPV 313
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK ++ YGMTETS ++ T D LE H+
Sbjct: 314 EVMKRVVAEMHMEQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG 355
Query: 362 GVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ PH+E+KV + G + TRG VML YW++ W+
Sbjct: 356 --TVGRVLPHIEVKVVDPATGVTLPRGAAGELCTRGYSVMLGYWNEPEKTAEAVDAGRWM 413
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ + + G V +VGR I GGEN+YP E+E L HP I I VVG A+ R
Sbjct: 414 HTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADIQVVGTAHERYG 473
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRK 534
E V+ACV R+ + E LR C ++ L +K P RL +L
Sbjct: 474 EEVLACVVPRDPADPP---------------TLEELRAFCADR-LAHYKIPSRLQLL--D 515
Query: 535 PFPLTSTGKIRRDEVR 550
FP+T +GK+R+ E+R
Sbjct: 516 TFPMTVSGKVRKVELR 531
>gi|126174820|ref|YP_001050969.1| AMP-binding protein [Shewanella baltica OS155]
gi|386341573|ref|YP_006037939.1| long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
gi|125998025|gb|ABN62100.1| AMP-dependent synthetase and ligase [Shewanella baltica OS155]
gi|334863974|gb|AEH14445.1| Long-chain-fatty-acid--CoA ligase [Shewanella baltica OS117]
Length = 570
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 157/579 (27%), Positives = 257/579 (44%), Gaps = 74/579 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHN--TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L IAA + + + +++ +Q++ + LA GLL++G++SGD V I + N
Sbjct: 30 IGQYLDEIAATYPDQLAVVVHHQYIRWNYRQYLAQIEALATGLLKLGIKSGDRVGIWSPN 89
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLE- 120
+ +EW L A A IG I+ +N + +E A++++ R V + D+ S YLE
Sbjct: 90 N---IEWCLTQYATAKIGAIMVCINPAYRPEELQYALSNVGCRAV-ICADKFKSSNYLEM 145
Query: 121 ---------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT 165
LQ A+P L + + +G+ S + D L D+
Sbjct: 146 LYELAPELTSCPAGQLQAKAVPELEFVIRMGAEKSVGMLNFDDLLVDVTADDKAALESIG 205
Query: 166 HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIG 225
+ +P A+ I FTSGTTGSPKG +SH ++ + + D PL H
Sbjct: 206 KALSPYDAINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCHDKLCIPVPLYHCF 265
Query: 226 GLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
G+ ++ L GA VF + F+ + L+ VEQ T+L VP + +A L + T
Sbjct: 266 GMVLGSLVCLAKGAAAVFPGESFDPLTTLQVVEQERCTALHGVPTMF--IAELEHPEFTR 323
Query: 284 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 343
S++ + G P E+M+ N +++ YG TE S L +T D +E
Sbjct: 324 FDLSSLRTGVMAGATCPEEVMRRVQNLMYMKEVLIGYGQTE-CSPLNHITEIDSPVEK-- 380
Query: 344 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRY 398
+ + VG+ PH E+K+ + + G + +RG +M Y
Sbjct: 381 -----------------RVLTVGRALPHTEVKIVDEFGEVLPINQAGEVCSRGYCIMQCY 423
Query: 399 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 458
W+ + WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H
Sbjct: 424 WNDPEKTAATIDSAGWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTH 483
Query: 459 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 518
+ V G+ + + E V A +++R +E + +R EK
Sbjct: 484 KDVQDAAVFGVQSDKYGEEVCAWIKVRSGATITEED----------------IRHFLTEK 527
Query: 519 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
FK PR ++ + P+T TGKI++ ++R + L
Sbjct: 528 -FAYFKVPR-YIKFVDQNPMTVTGKIQKFKMRELMYQEL 564
>gi|218781330|ref|YP_002432648.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218762714|gb|ACL05180.1| AMP-dependent CoA ligase/synthetase [Desulfatibacillum alkenivorans
AK-01]
Length = 508
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 244/536 (45%), Gaps = 81/536 (15%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++F + + LA L + G+R GD VA NS +LE + A + IG I+ PLN+R + E
Sbjct: 30 REFNERINQLAHLLQKEGIRKGDRVAALMANSNVFLEILFACSKIGAIMVPLNFRLAPPE 89
Query: 96 ASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK 155
I P +L + LQ IP++R + + + + + L A +
Sbjct: 90 LEFIINDCEPSLLFYSPEFTAVRDALQDK-IPTVRERICEMAGGAPNDGEYESLIAPM-- 146
Query: 156 GYSLRSLPFTHSWAPEGAVI------ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY 209
T PE V+ I +TSGTTG PKG V+SH Q A A V Y
Sbjct: 147 --------STAEPTPESEVVMDDPQFIMYTSGTTGKPKGAVLSHGN--TQWNAINAAVTY 196
Query: 210 GED--DVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKF-ESKSALEAVEQHCVTSLITV 266
G D DV + APL HIG L+ + + G + I +F + L+ +++ VT + +
Sbjct: 197 GSDNNDVVMCCAPLFHIGALNCSATPALYGGASLTIQRFFDPVGVLKMIQEDRVTVMFGI 256
Query: 267 PAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA--YGMTE 324
P + ++ + T +VK +L GG P L++ ++ K ++ A YGMTE
Sbjct: 257 PVMYLFMSQMPEFPNT--DFSTVKYLLAGGSPCPRALIE----TYQKKGVLFAQGYGMTE 310
Query: 325 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV 384
T+ +++ + + +A + G C GKP H E+KV ++ +
Sbjct: 311 TAPAISAL-----------RKEEALKKI---------GSC-GKPLLHTEVKVVDAQNNEL 349
Query: 385 -----GRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRN 436
G ++ RG VML YW +P + + W+ TGD+G D+ G ++L+ R+
Sbjct: 350 APHEMGEVVVRGPIVMLEYW----KRPEATANTIVDGWMHTGDMGYFDEEGYLYLMDRKK 405
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
SGGENVYP EVE L+ +P I V+G+A+ + W E
Sbjct: 406 DMYISGGENVYPAEVEDALMSNPKIADAGVIGVADEK----------------WGEVGMA 449
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K LS + + CREK L G+K P+ V + P T TGKI + ++R +
Sbjct: 450 ILVKTPGEDLSEDEVISWCREK-LAGYKCPKK-VAFVDELPRTMTGKILKKDLRAQ 503
>gi|357040681|ref|ZP_09102466.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355356215|gb|EHG04008.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 466
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 239/514 (46%), Gaps = 62/514 (12%)
Query: 49 LLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVML 108
LL +GL GD VA WYLE+ + G + PLNYR +E I + RP +
Sbjct: 2 LLNLGLEKGDRVAFLDKTCPWYLEFYYGITLGGLVAVPLNYRLVERELIYIINNCRPKAI 61
Query: 109 VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 168
+ S + ++ + IP+++ +S+ + + + + + L+ P
Sbjct: 62 IVG-SEYTNIIDSIRSHIPTIKHFISMEPADGYMLYESKIKESSPLE-------PNVEIS 113
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
A + AVI +TSGTT PKGV++SH + + + V DD+ + APL H+ G
Sbjct: 114 AKDLAVI-SYTSGTTSMPKGVMLSHGNISANAANENLSVCITHDDIVYYPAPLFHVMG-C 171
Query: 229 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD- 287
AM ML G C + +++++ E ++Q +T ++T L L+ + +K D
Sbjct: 172 MAMGMLATG-CTLVFEEYKAEKFYERIQQESITKVVTT---AGPLTMLVNSEINYKQYDL 227
Query: 288 -SVKKILNGGGGLPSELMKEATNSFPKAKLIS-AYGMTETSSSLTF--MTLYDPTLETPG 343
S++ ++ GG +P ++ E N P +++ ++ TE S +T +T D LE
Sbjct: 228 SSLRTVITGGSPMPGKIATELFNILPNLEVMYVSFAQTEASPFITIDAVTRQD-ILE--- 283
Query: 344 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRY 398
G +S G+ +K+ D + H G I+ RG +VML Y
Sbjct: 284 ------GRYNEHS---------GREVFLTRVKIVDDQDNDLPVGHRGEIIARGPNVMLGY 328
Query: 399 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 458
W + + + + E WL T DIG D G +++V R+ I SG ENV +EVE+VL QH
Sbjct: 329 W-EMPEENTQTLREGWLHTNDIGYFDSNGYLYVVDRKKDMILSGSENVSSKEVESVLYQH 387
Query: 459 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 518
P I V+G+++ + E V A + L+ Q E + + CRE
Sbjct: 388 PAIADAAVIGVSDEKWGERVHAVIVLKSGQQE----------------DPEGIIKFCRE- 430
Query: 519 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
NL G+K PR + + P +TGK+ ++ +R +
Sbjct: 431 NLAGYKTPR-SIEFISDLPRNATGKVLKNRLREK 463
>gi|424853927|ref|ZP_18278285.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663974|gb|EHI44067.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 496
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 235/542 (43%), Gaps = 70/542 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+N + G R T ++ LA GL +G+ GD V N LE + A +
Sbjct: 4 KNEALVFDG-RAVTYEEMALRTRRLAHGLHALGVEKGDCVGFFGFNDPAALEVMFAAGLL 62
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G PLN R + +EA + R ++ + EL + P W + LG+S
Sbjct: 63 GATYLPLNARLTAEEARYVLGDSRCTTVIFGDQQADVAQELAQSDTPVTTW-IGLGAS-- 119
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV----------IICFTSGTTGSPKGVV 190
+S + H+ P+ + ++ ++SGTTG+PKGV+
Sbjct: 120 ----------------WSTHTYEGVHAGQPDTRIDEQVGLDDLSVLMYSSGTTGAPKGVM 163
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFIPKFESK 249
+SH ++ +L ++ + L APL HIGG+ A+ L+ G V + KF++
Sbjct: 164 LSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPTLLNGGTVVLLRKFDAG 223
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
L+ +E+ +T+ VP ++ +L R S++ I G LP L+ +
Sbjct: 224 VVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAICVAGAPLPEALISPWQD 281
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ AYG+TET+ S+T ++ D + + F T V +P G
Sbjct: 282 R--DVAITQAYGLTETAPSVTMLSSADVRSKIGSAGKRTF--FTDVDVVRPDGSSA---E 334
Query: 370 PHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
PH +G I+ +G +VML Y +Q A + + + WL TGD G DD G +
Sbjct: 335 PH-----------EIGEIVAKGPNVMLGYLNQPEAT-ARTIVDGWLHTGDAGYFDDEGFL 382
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 383 FICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK---------------- 426
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
W E+ L E +R REK L GFK P F+ + P T+TGKIR+ ++
Sbjct: 427 WGETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIAEALPRTATGKIRKPDL 484
Query: 550 RR 551
R+
Sbjct: 485 RK 486
>gi|194291334|ref|YP_002007241.1| long-chain-fatty-acid--CoA ligase [Cupriavidus taiwanensis LMG
19424]
gi|193225238|emb|CAQ71180.1| putative AMP-dependent synthetase and ligase, putative
o-succinylbenzoate--CoA ligase [Cupriavidus taiwanensis
LMG 19424]
Length = 546
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 237/556 (42%), Gaps = 63/556 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + A ++ +V R T F ++ +A+ LL GLR+GD + NS+
Sbjct: 28 LPHAVRHFARLRPEAVAYSFEGRQTTYAAFERNTDRVAQALLAEGLRAGDRIGYVGKNSD 87
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
Y E +L G ++AP ++R + E + V+L S + L A+P
Sbjct: 88 HYFELLLGAGKTGAVMAPASWRLAPPEVEFILGHCDAVVLFVGAESAAMVRNLL-PALPL 146
Query: 129 LRWHVSLGSSSSD-----FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+R V + + + RD A P H A V+ +TSGTT
Sbjct: 147 VRKVVVMEPCDGQGDWPCYTDWRDAHPA----------TPPAHEPAAHDVVLQLYTSGTT 196
Query: 184 GSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
G PKG +++H L V +A + DD+ L P+ HIGG + L+ GA
Sbjct: 197 GRPKGAMLTHRNLTIGTEVSEREHLAWSHWVADDISLVAMPVAHIGGSGWGLRNLLSGAK 256
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V +F+ ++ L+ +E V+ L VPA M + R ++ R +K +L G +
Sbjct: 257 GVVAREFDPRAVLDFIEHERVSKLFLVPAAMQIVLRDPRARQVDYSR--LKYLLYGAAPI 314
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P+ L++E F + YGMTET+ ++ + D T +
Sbjct: 315 PAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPEDHTTD-----------------EV 356
Query: 360 PQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
P+ GK P VELKV VG ++ R H M YW Q + W
Sbjct: 357 PRMRAAGKALPGVELKVVDYEGRQLAPGEVGEVVVRSQHNMAGYWKQPEETARTIDADGW 416
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L TGD G +D G +++ R I SGGENVYP EVE+ + HP + + V+G+ + +
Sbjct: 417 LRTGDAGYMDAEGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPQVADVAVIGVPDEKW 476
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A V L+ + +++ +L+ + + GFK P+ + +
Sbjct: 477 GEAVKAIVVLKPG----------QAADRDAILA-------WTRQRVAGFKVPK-SIEFVD 518
Query: 535 PFPLTSTGKIRRDEVR 550
P +GK+ R ++R
Sbjct: 519 ALPRNPSGKLLRRKLR 534
>gi|410461301|ref|ZP_11314953.1| long-chain-fatty-acid--CoA ligase [Bacillus azotoformans LMG 9581]
gi|409926086|gb|EKN63284.1| long-chain-fatty-acid--CoA ligase [Bacillus azotoformans LMG 9581]
Length = 519
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 146/530 (27%), Positives = 241/530 (45%), Gaps = 62/530 (11%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNY 89
N+ T + + V NLA L +G++ G++V+ N+ ++ + A A +G I P+NY
Sbjct: 28 NQQWTYSELKEKVNNLAGALQNLGVKKGNVVSTFLYNTSEFVIALFAAAKLGAIFNPINY 87
Query: 90 RWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
R + E + +L+ + ++R LG + F+ D
Sbjct: 88 RLTAHELQYILNDAGSTVLL-----------YEGVVAETIRKTADLGVNVDHFIFVDDDA 136
Query: 150 TADILKGYSL--RSLPFTHSWAPEGAV-IICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
+ L Y L +SL F E + I+ +TSGTTG PKGV+ H ++ + +
Sbjct: 137 PSGSLDFYELINKSLGFQPVEVSENDLYIMMYTSGTTGKPKGVLHKHRDMVHHNFLMMQC 196
Query: 207 VGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLIT 265
G+ ++D+ L APL H L +S + L VGA +V + F++K L+ +E+ VT +
Sbjct: 197 QGFTKEDIGLTIAPLNHTAELHTSFLPRLQVGATNVLLHHFDTKLVLKTLEEAKVTHMFA 256
Query: 266 VPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 325
P + + L+ + K S ++L GG + ++ + A L+ +G TE
Sbjct: 257 APTM---VNMLLNDEDFDKYDLSKLRLLGYGGASMAPVLIREFQARTNAGLVQMFGTTEM 313
Query: 326 SSSLTFMTLY-DPTLETPGQLPQAF-------GNVTPNSVHQPQGVCVGKPAPHVELKVC 377
++ LY D LE G +A V P+ P +C
Sbjct: 314 GPVMS--VLYSDEQLEKAGSAGKAILTHEVRIARVNPDGPTHPDDLC------------- 358
Query: 378 SDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
G VG IL +G VM Y+ + A K +++ G W TGD+GS+D+ G VW+ R +
Sbjct: 359 --GIGEVGEILVKGPCVMEGYYKRPDATKAALAYG--WYHTGDLGSLDEEGYVWIRDRID 414
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
I SG EN+YP EVE LL+HP ++ + V+G + + ++VV V L+E ++ D
Sbjct: 415 HMINSGAENIYPREVEDQLLEHPDVLEVAVIGEPDPKWGQIVVGYVVLKEGSNLEANDLD 474
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
Q L+ E L FK PR + + P T +GKI++
Sbjct: 475 Q------YLIDGE---------KLAPFKRPRKY-RFIDILPKTPSGKIQK 508
>gi|452855793|ref|YP_007497476.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452080053|emb|CCP21814.1| putative acyl-CoA synthetase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 546
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 255/573 (44%), Gaps = 68/573 (11%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R A + R +VV T +F + A+GL+++G+ GD VAI A N +
Sbjct: 13 LERTAKLFPDREAVVYPERGLRYTYAEFDRLCRQTAKGLMKLGVEKGDHVAIWASNIPEW 72
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL 129
L A A IG ++ +N + E + S +++ D + Y+E+ + IP L
Sbjct: 73 LAAQFATAKIGAVLVTINTNFQIAELDYLLAHSDVSALIIMDSYRQTSYVEIVNKLIPEL 132
Query: 130 ----------------RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 173
R + +G S +++ D L + S +
Sbjct: 133 KTCKRGRLRSKRYPFLRTVLYIGDKSPPGMHRWDSLLDNAESETDAALDGRMDSLKKDDC 192
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCH-IGGLSSAM 231
+ + +TSGTTG PKGV++SH IV + A IA + D P H G + +
Sbjct: 193 IHMQYTSGTTGFPKGVMLSHFN-IVNNAANIAECMKLTSCDRLCIPVPFFHCFGCVLGVL 251
Query: 232 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
A + GA + I +F + L+ VEQ T+L VP + +A L + + V+
Sbjct: 252 ACVSAGAAMIPIEQFSPPAVLKTVEQEACTALHGVPTMF--IALLNDSRFSEYDLSHVRT 309
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+ G P+E+M+E + AYG TE S +T T D + E +
Sbjct: 310 GIMAGSPCPAEVMREVIGKMGMTGITIAYGQTEASPVIT-QTRTDDSFERRVE------- 361
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAK 405
G+ PH+E+++ G+S G + TRG HVM Y+ A
Sbjct: 362 ------------TAGRALPHIEVRIVRPGTSQEAARGEQGELCTRGYHVMKGYYKNQEAT 409
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ WL TGD+ +D+ G + GR + GGEN+YP E+E +L +HP + +
Sbjct: 410 EEAIDKDGWLHTGDLAVMDEDGYCKITGRLKDMLIRGGENIYPREIEEMLYRHPAVADVQ 469
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
VVG+ + + E A +RL++ Q++ S+E +R C+E ++ +K
Sbjct: 470 VVGVPDPKYGEEAAAWIRLKDG---------QTA-------SAEDIRTFCKE-HIARYKV 512
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
PR +VL+ +P+T++GKI++ ++R + + LK
Sbjct: 513 PR-YVLFTDEYPMTASGKIQKFKLREKTIEELK 544
>gi|294632131|ref|ZP_06710691.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292835464|gb|EFF93813.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 541
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 245/551 (44%), Gaps = 71/551 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T F DV LAR LL G+ GD V I A+N EW+L A
Sbjct: 30 DREALVDVPSGRRWTYADFAADVDRLARALLASGVAKGDRVGIWAVNCA---EWVLVQYA 86
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL--ELQHTAIPSLRW 131
A IG I+ +N + E + +L +SSD + +++H A P LR
Sbjct: 87 TARIGAIMVNINPAYRTHEVEYVLKQAGISLLFASLRHKSSDYRGMIGQVRH-ACPDLRE 145
Query: 132 HVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
V + S ++FV + AD L L + + + I +TSGTTG PKG
Sbjct: 146 VVYIDDPSWTEFVARDAPDRADEL-------LARAAELSCDDPINIQYTSGTTGFPKGAT 198
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIP--KFE 247
+SH ++ ++ Y E D P H G+ +A GAC V +P F+
Sbjct: 199 LSHHNILNNGYFVGELIAYSEQDRVCVPVPFYHCFGMVMGNLAATSHGACLV-VPAASFD 257
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+ LEAV++ TSL VP + +A L +++ + G P E+MK
Sbjct: 258 PAATLEAVQRERCTSLYGVPTMF--IAELNLPGFAEYDLSTLRTGIMAGSPCPVEVMKRV 315
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
A++ YGMTETS ++ T D LE H+ VG+
Sbjct: 316 VAEMHMAEVAICYGMTETSP-VSLQTRMDDDLE-----------------HRTG--TVGR 355
Query: 368 PAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PH+E+KV + G + TRG VML YW+Q W+ TGD+
Sbjct: 356 VLPHLEVKVVDPATGVTQPRGRAGELCTRGYSVMLGYWEQPEKTAEAIDAGRWMHTGDLA 415
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+ + G V +VGR I GGEN+YP E+E L HP I + VVG+ + + E V+AC
Sbjct: 416 VMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQVVGVPHEKYGEEVLAC 475
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTS 540
V D + L+ E LR C ++ L +K P RL VL FP+T
Sbjct: 476 V----------IPLDPADP-----LTLEELRAFCADR-LAHYKIPSRLSVL--DAFPMTV 517
Query: 541 TGKIRRDEVRR 551
+GK+R+ E+R+
Sbjct: 518 SGKVRKIELRQ 528
>gi|410722625|ref|ZP_11361894.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Methanobacterium sp. Maddingley MBC34]
gi|410595956|gb|EKQ50644.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Methanobacterium sp. Maddingley MBC34]
Length = 553
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 254/590 (43%), Gaps = 82/590 (13%)
Query: 4 YSQAHICQCLSRIAAVKRNSVVTITGNR--HNTGQQFVQDVLNLARGLLEIGLRSGDIVA 61
+S+ I L + N + +R T Q+F + V LA+GLLEIG+++GD V
Sbjct: 3 FSELTIGDFLEEMVKKDPNQEFMVYPDRDLRFTYQEFDERVNLLAKGLLEIGIKNGDHVG 62
Query: 62 ISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLE 120
I A N +L + A + IG ++ +N + E + + S + + D D Y++
Sbjct: 63 IWAKNVPDWLTLMFATSKIGVVLVTVNTAYKSHELAYVLEQSDMKALAIIDGYQDVDYIQ 122
Query: 121 LQHTAIPSLRWHV--SLGSSSSDFVNKRDMLTADILKG-YSLRSLPFTHSWAPEG----- 172
+ +P L+ L S F++ + + +G Y+ L S A E
Sbjct: 123 TVYELLPELKTQERGKLNSEKFPFLDSVIYVGQEKHRGMYNTNELLLLGSHADEEEFQRI 182
Query: 173 --------AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
V + +TSGTTG PKGV+++H ++ + E D T PL H
Sbjct: 183 KSSVTNDEVVNMQYTSGTTGFPKGVMLTHRNILNNGYYIGERQKFTEKDRLCITVPLFHC 242
Query: 225 GGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI--------MADLAT 275
G+ A MA GA V + F+ L AV++ T+L VP + M D+
Sbjct: 243 FGIVLAVMATFSHGATMVMVELFDPLMVLAAVQKERCTALYGVPTMFIAEYSHPMFDMFD 302
Query: 276 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
L S++ + G P E MK N ++ S YG+TE S T ++
Sbjct: 303 L----------SSLRTGIMAGSTPPIEAMKRVVNDMNMTQITSVYGLTEGSPGFTQTSVD 352
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILT 389
DP + + VGKP P E+K+ G G I
Sbjct: 353 DPL--------------------EKRVETVGKPLPECEVKIVDPETGETLGPHQTGEICC 392
Query: 390 RGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPE 449
+G +VM Y+ V E WL +GD+ S+D+ G +VGR I GGEN+YP
Sbjct: 393 KGYNVMKGYYKMPEKTREVIDDEGWLHSGDLASVDEEGYYSIVGRIKDMIIRGGENIYPR 452
Query: 450 EVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSE 509
E+E L PG++ + VVGI + + E+V AC+ L E + +E +
Sbjct: 453 EIEEFLYTMPGVLDVQVVGIPDEKYGEIVGACIILEEEAELTEED--------------- 497
Query: 510 VLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKS 559
+R + R K + FK P+ V + FPLT++GKI++ +R + LK
Sbjct: 498 -VRDYARTK-IARFKVPK-HVFFVDEFPLTASGKIQKFILREQAEKLLKE 544
>gi|402850383|ref|ZP_10898585.1| Long-chain-fatty-acid--CoA ligase [Rhodovulum sp. PH10]
gi|402499331|gb|EJW11041.1| Long-chain-fatty-acid--CoA ligase [Rhodovulum sp. PH10]
Length = 509
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 152/552 (27%), Positives = 252/552 (45%), Gaps = 57/552 (10%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + L R + + + I +R T + V LA L +G+ GD VAI A +S+
Sbjct: 3 LTRSLVRASRISPDKTALIFHDRRWTWHEHASRVARLAGALRTLGVGPGDRVAILAHSSD 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
++E + A+ + GG++ PLN R + + + + +L+ L+ A
Sbjct: 63 RFIESVFAILWAGGVLVPLNARATPGDIAGMLDDCDAAVLLVGADFLPLLPTLRAGA-QK 121
Query: 129 LRWHVSL--GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
LR ++L G++ + + D++T S P + + A I +T GTTG
Sbjct: 122 LRHVIALDDGATPTGTIPYADLIT-------SSDETPRAETGGDDLAAIF-YTGGTTGPA 173
Query: 187 KGVVISHSALIVQSLAKIA-IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
KGV++SH+ L +L IA G+ E VYLH+ PL H+ S ++GA HV IP+
Sbjct: 174 KGVMLSHANLYANALHGIAQFGGHDERTVYLHSGPLYHLAAGSRVFTTTILGATHVVIPR 233
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F + L+A++ H VT VP ++A +I ++ D S+ ++ GG +P L
Sbjct: 234 FTVEGVLDAIKTHRVTMTAMVPTMLA----MILSHPAFEHADLSSLSFLVYGGSPMPEAL 289
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ EA P + YGMTE S + T++ +L+ P H+ +
Sbjct: 290 IVEAMRRLPHVRFGQGYGMTELSPACTYLEPRHHSLD-------------PALRHRLR-- 334
Query: 364 CVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VG+PA V++++ + + VG I G VM YW + A V V + TG
Sbjct: 335 SVGRPAMGVDIRILDEAGHDRPTGEVGEIAVAGPIVMQGYWKRPDATREVLRDGV-MHTG 393
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G +D G +++V R I +GGE V+ EVE V+ +HP + VVG
Sbjct: 394 DLGYLDRDGFLYIVDRLKDMIVTGGEKVFCIEVEDVMRKHPAVALCAVVG---------- 443
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
R W E+ ++++ + HCR +L G+K PR + +R PL
Sbjct: 444 ------RPHPIWGEAVHGVVVPRPGASVTADEIVAHCR-AHLAGYKVPR-SIEFRTAMPL 495
Query: 539 TSTGKIRRDEVR 550
+ KI + +R
Sbjct: 496 SGANKILKTVLR 507
>gi|149377184|ref|ZP_01894932.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149358483|gb|EDM46957.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 562
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 246/551 (44%), Gaps = 80/551 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGIVAPLNYRWS 92
T ++FV+ V AR + IG++ GD V I + N EW + A A +G I+ +N +
Sbjct: 49 TYKEFVEKVNEAARAFIAIGVKRGDRVGIWSPNRYEWTVTQ-FATAKVGAILVNINPAYG 107
Query: 93 FKEASRAITSIRPVMLVTDES---SDSWYL--------------ELQHTAIPSLRWHVSL 135
E A+ +LVT +S SD + +L+ +P LR V+L
Sbjct: 108 VHELDYAMNLSGISVLVTADSFKASDYRKMVYDLAPELKAATPGKLKAQKVPELRAVVNL 167
Query: 136 GSSSSD-------FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
D F+ ++ + L L F + + I FTSGTTG+PKG
Sbjct: 168 DKDKHDGMWTWAEFIGFAGDVSQEELDKVQ-DQLQF------DDPINIQFTSGTTGNPKG 220
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPK-F 246
++H ++ E D + PL H G + + + G+ ++ + F
Sbjct: 221 ATLTHHNILNNGYFVAESQLLTEKDRLVIPVPLYHCFGMVMGNLGCITHGSTMIYPGEGF 280
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E KS L+AV Q T+L VP + +A L + +++ + G P+E+MK+
Sbjct: 281 EPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSTLRTGIMAGSICPAEVMKK 338
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
++ AYGMTETS T + DP + Q VG
Sbjct: 339 VNGKMNMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTVG 378
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E K+ G+ +V G + TRG VML+YW+ G W+ TGD+
Sbjct: 379 RTQPHLETKIVDPGNGNVVPRGEIGELCTRGYSVMLKYWNNEEKTSEAIDGAGWMHTGDL 438
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++D+ G + +VGR + GGEN+YP+E+E L HP I + V GI + + E ++A
Sbjct: 439 ATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELIA 498
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V+L N D ++ + LR+ C+ K + FK PR + + FP+T
Sbjct: 499 WVKL---------NPDADP------VTGDELREFCKGK-IAHFKIPRNYKFVDE-FPMTV 541
Query: 541 TGKIRRDEVRR 551
TGKI++ ++R
Sbjct: 542 TGKIQKFKMRE 552
>gi|412992139|emb|CCO19852.1| AMP-dependent synthetase and ligase [Bathycoccus prasinos]
Length = 783
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 207/430 (48%), Gaps = 59/430 (13%)
Query: 176 ICFTSGTTG-SPKGVVISHSALIVQSLAKIAIVG---YGEDDVYLHTAPLCHIGGLSSAM 231
+ FTSGT+G +PK ++SHS L +K+ Y +DVYLH APL H+GGL S +
Sbjct: 354 LVFTSGTSGFAPKAAILSHSNLAAAIDSKLYDENGPQYDSEDVYLHCAPLYHVGGLISGL 413
Query: 232 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR------------- 278
A + A HVF+ F+++S L+A+ VT+ I VP ++ L + +
Sbjct: 414 AAIKADARHVFLESFDARSFLQAIVTAEVTAFIAVPTMLRKLERMCKDAHLIPRPTTISS 473
Query: 279 -VKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 337
V+ +SVKKIL GGG + + + A FP AK+IS YGMTE +SS+ + L D
Sbjct: 474 TVQSNPSTFNSVKKILVGGGPMHEKDVAFARKIFPNAKIISTYGMTEATSSIAYADLTDI 533
Query: 338 TL-----ETPGQLPQAFGN---VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILT 389
+ T + G+ VT NS V GK + +K+ D IL
Sbjct: 534 EMTPLGSRTASASDMSLGDNWVVTANS-----NVNQGKIIEGLSVKI--DRLGQENEILI 586
Query: 390 RGAHVMLRYWDQFLAK----PSVSTGEVWLDTGDIGSI-DDGGNVWLVGRRNGRIKSGGE 444
RG V Y++ +A + TGDIG + D V ++GR + IK+GGE
Sbjct: 587 RGETVSKGYYNTPVAHSLHVDDKYNNNGYFRTGDIGEVSKDSNTVRILGRLSNAIKTGGE 646
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR---------------ESWQ 489
NV EVE V+ +H + VV G+ + E+V VRL+ ++W+
Sbjct: 647 NVSCLEVEQVVEKHELVQESVVYGVPDDVWGEIVTCAVRLKPDVEWAQPTENLNNPDAWE 706
Query: 490 WSESNCDQSSKNKELLLSS------EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
+ + + + + LSS E+LR C +K L FK P+ +V+ FP S GK
Sbjct: 707 FMKYAEEHMDDHMDGQLSSLKKVNGEMLRHWCLKKQLARFKVPKQWVVVENEFPRNSGGK 766
Query: 544 IRRDEVRREV 553
I ++RRE+
Sbjct: 767 IDLSQLRREI 776
>gi|433802354|gb|AGB51436.1| putative long-chain-fatty-acid-CoA ligase [Nocardia nova]
Length = 524
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 157/554 (28%), Positives = 244/554 (44%), Gaps = 71/554 (12%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA 76
A ++ ++V + T +Q + L A L G+ GD V I ALN YLE +
Sbjct: 26 ALMRPDAVAVRFRGQDTTWKQLHERSLKFADSLARRGVGFGDRVLILALNYTEYLEAVFG 85
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI------PSLR 130
+ +G I P+N+R + E + ++ +VTD LQ AI L+
Sbjct: 86 INALGAIAVPVNFRLTPPEVAYIVSDSGAAAIVTDSL-------LQPLAIGVMAQSEQLK 138
Query: 131 WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
V +G ++ D V D A+ + + + +P + +I +TSGTTGSPKG +
Sbjct: 139 TCVVIGGTTGDGVIGYDDFLAETGEPHVPQDIP------EDTPALIMYTSGTTGSPKGAI 192
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFES 248
+S++ L Q+L I + D + T+PL HI GL S M+G+ V P F +
Sbjct: 193 LSYANLNSQALTCIRAMNSTPDTIAFCTSPLFHIAGLGSLAPAFMLGSKTVLHPLGAFNA 252
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LMKEA 307
L+A+E T+ VPA +I T K R + L+ G SE +++
Sbjct: 253 TEFLDAIEAEQATTAFCVPAQW----QVICEDPTVKTRKLALETLSWGAAPASETVLRAM 308
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
FP A+ ++ +G TE S + D L G VG+
Sbjct: 309 AECFPDAQNVAVFGQTEMSPITCVLEGKD-ALRKLGS--------------------VGQ 347
Query: 368 PAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
P P ++ +V D +G I+ RG +M YW++ A G W +GD+
Sbjct: 348 PIPTIQTRVVDDEMNDVAPGEIGEIVYRGPTMMQGYWNKPEATAEAFAGG-WFHSGDLVR 406
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
D+ G VW+V R+ I SGGEN+Y EVE VL HP I VVG A+ + E+ VA V
Sbjct: 407 QDEEGFVWVVDRKKDMIISGGENIYCAEVENVLFAHPKIHEAAVVGRAHEKWGEVPVAVV 466
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
L E L+ E L + E NL +K P+ V+ + P ++G
Sbjct: 467 ALLEGET----------------LTLEELSEFLNE-NLARYKHPKDLVIVPE-LPRNASG 508
Query: 543 KIRRDEVRREVMSH 556
K+ + ++R+E +
Sbjct: 509 KVVKVQLRKEYADY 522
>gi|56476570|ref|YP_158159.1| ADP-producing CoA ligase, feruloyl-CoA synthetase [Aromatoleum
aromaticum EbN1]
gi|56312613|emb|CAI07258.1| putative ADP-producing CoA ligase,similar to feruloyl-CoA
synthetase [Aromatoleum aromaticum EbN1]
Length = 510
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 242/555 (43%), Gaps = 64/555 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ + + R A ++ R + Q V LA L G+ VA NS
Sbjct: 2 ELSEWIDRHAGLEPGKTAIRFPERDLSYAQLAGLVERLASALKASGVAHRSCVAYLGYNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA-I 126
L + A A +G + PLN+R + E + + P +L ++E + A I
Sbjct: 62 PEMLATLFACARLGALFMPLNWRLAGPEHRQLLADCPPSVL---------FVEPRFVAQI 112
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ R ++ + + + ++ + L S ++P P+ ++IC+TSGTTG P
Sbjct: 113 DAFRDALADVTLVAFDAPPQGWISYEALLERSGDAVPRDPQVGPQTPLLICYTSGTTGKP 172
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPK 245
KG ++S AL ++ I + DD L T PL H+GGL++ L GA V PK
Sbjct: 173 KGALLSQGALAWNAVNSIDLHELSADDRILTTLPLFHVGGLNNQTTPALSAGATVVLHPK 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F++ + +A+EQ +T + VPA + ++ + W+ D S++ I G +P L
Sbjct: 233 FDADATFDAIEQERITLTVLVPAQL----EMMIARPRWQSADLSSLRMITTGSTIVPERL 288
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
++E L+ YG TET + V P + G
Sbjct: 289 IREVHRR--GVPLVQIYGSTETCPIAAY--------------------VKPADAQRKAG- 325
Query: 364 CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
G+ APH L++ D V G IL RG +VM YW+ A +V + W TG
Sbjct: 326 SAGRAAPHCSLRIVGDDGHDVKPGATGEILVRGPNVMNAYWNDLQASAAV-LKDGWFRTG 384
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G D G +W+ GR+ I SGGEN+YP E+E +L + P I + VVG
Sbjct: 385 DMGHQDGEGYLWVDGRKKEMIISGGENIYPAEIENLLGESPDIAEVAVVG---------- 434
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
RL E W + + L + VL+ E + +K P+ V + P
Sbjct: 435 ----RLDERWGEVVVAVVVPLEGRT-LDAGHVLQ--LLEGRIARYKLPKEVVFLDE-LPR 486
Query: 539 TSTGKIRRDEVRREV 553
T+ GK+R+D+VR+ V
Sbjct: 487 TALGKVRKDDVRQLV 501
>gi|418472696|ref|ZP_13042408.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
gi|371546689|gb|EHN75137.1| AMP-binding domain protein [Streptomyces coelicoflavus ZG0656]
Length = 536
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 238/547 (43%), Gaps = 67/547 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R T +F V +ARGLL G+ GD V I A+N EW+L A
Sbjct: 34 REALVDVPSGRRWTYAEFGAAVDEVARGLLAKGVTKGDRVGIWAVNCP---EWVLVQYAT 90
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHV 133
A IG I+ +N + E + +LV +SSD +E P+LR V
Sbjct: 91 ARIGVIMVNVNPAYRAHELEYVLKQSGITLLVASLAHKSSDYRAIVEQVRGRCPALRETV 150
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G S D LTA R+ + + V I +TSGTTG PKG +SH
Sbjct: 151 YIGDPSWD------ALTAAAASVPRERADALAAELSCDDPVNIQYTSGTTGFPKGATLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV---GACHVF-IPKFESK 249
++ VGY E D P H G+ M L V GAC V P F+
Sbjct: 205 HNILNNGYWVGRTVGYTEQDRVCLPVPFYHCFGM--VMGNLGVTSHGACIVIPAPSFDPV 262
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ LEAV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 263 ATLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVEVMKRVVA 320
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ YGMTETS ++ T D LE H+ VG+
Sbjct: 321 EMHMEQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG--TVGRVL 360
Query: 370 PHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+KV + G + TRG VML YW++ W+ TGD+ +
Sbjct: 361 PHIEVKVVDPVTGVTVPRGAAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTGDLAVM 420
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
+ G V +VGR I GGEN+YP EVE L HP I + VVG+ + R E V+ACV
Sbjct: 421 REDGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPHERYGEEVLACVV 480
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
R++ L+ E LR +C + L +K P L FP+T +GK
Sbjct: 481 PRDAAD---------------PLTLEELRAYC-DGQLAHYKVPSRLQLVDS-FPMTVSGK 523
Query: 544 IRRDEVR 550
+R+ E+R
Sbjct: 524 VRKVELR 530
>gi|302555107|ref|ZP_07307449.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
gi|302472725|gb|EFL35818.1| dicarboxylate-CoA ligase PimA [Streptomyces viridochromogenes DSM
40736]
Length = 529
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 236/547 (43%), Gaps = 72/547 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T +F DV LA LL G+ GD V I A+N EW+L A
Sbjct: 31 DREALVDVPSGRRWTYARFAADVDELAYALLASGVAKGDRVGIWAVNCP---EWVLVQYA 87
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS----WYLELQHTAIPSLRWH 132
A IG I+ +N + E + +L S + +E P LR
Sbjct: 88 TARIGAIMVNINPAYRTHEVEYVLKQAGVSLLFASSSHRTSDYRAMVEQVRGRCPRLRET 147
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +G + A I +G +PF + + + I +TSGTTG PKG +S
Sbjct: 148 VFIGDPGWE---------ALIARG---TPVPF-EELSCDDPINIQYTSGTTGFPKGATLS 194
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ ++ Y E D P H G+ +A GAC V P F+ K+
Sbjct: 195 HHNILNNGYFVGELIAYTEQDRICVPVPFYHCFGMVMGNLAATSHGACIVIPAPSFDPKA 254
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+AV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 255 TLDAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVMKRVVAE 312
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
A++ YGMTETS ++ T D LE H+ VG+ P
Sbjct: 313 MHMAEVSICYGMTETSP-VSLQTRRDDDLE-----------------HRTG--TVGRVLP 352
Query: 371 HVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+KV + G + TRG VML YWD+ W+ TGD+ ++
Sbjct: 353 HIEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWDEPEKTAEAVDAGRWMHTGDLATMR 412
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E L HPGI + +VG+ + E V+ACV
Sbjct: 413 EDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPGIQDVQIVGVPHEHYGEEVLACVIA 472
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGK 543
R+ + E LR C E L +K P RL +L FP+T +GK
Sbjct: 473 RDPADPP---------------TLEGLRAFC-EGRLAHYKIPSRLQLL--DTFPMTVSGK 514
Query: 544 IRRDEVR 550
+R+ E+R
Sbjct: 515 VRKVELR 521
>gi|15613694|ref|NP_241997.1| AMP-binding domain protein [Bacillus halodurans C-125]
gi|10173747|dbj|BAB04850.1| long-chain fatty-acid-CoA ligase [Bacillus halodurans C-125]
Length = 546
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 242/547 (44%), Gaps = 80/547 (14%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
QF+ A+GL+++G+ G+ VAI A N EW + A +G ++ +N + E
Sbjct: 39 QFLSKCQQAAKGLMKLGIERGEHVAIWATNVPEWVITQ-FATGTMGAVLVTVNTNYRTSE 97
Query: 96 ASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL----------------RWHVSLGSS 138
+ S +L+ D D+ Y+E+ + +P L R + LG
Sbjct: 98 LEYLLKQSDATTLLLIDGYRDASYVEMLYEILPELKTSEPGACYSKKLPHLRRVIHLGEE 157
Query: 139 S-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
D +N +T D L S S P+ + + +TSGTTG PKGV++
Sbjct: 158 RYPGMYTWEDVLNLGTEVTNDELAERSA-------SLDPDDVINMQYTSGTTGFPKGVML 210
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKS 250
+H+ ++ + + +D P H G + +A + VGA V + +F
Sbjct: 211 THNNIVNNARNIAECMKLTNEDRLCIPVPFFHCFGCVLGTLACVSVGATMVPVQEFNPTR 270
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+AVE T L VP + +A L ++ + G P E+MK A
Sbjct: 271 VLQAVEAEKCTGLHGVPTMF--IAELNDEDFMNYNLSHLRTGIMAGSNCPIEVMKAAIEK 328
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ + AYG TETS +T + DP +E Q VG+P P
Sbjct: 329 MGMSDITIAYGQTETSPVITQTRVDDP-IELRVQ-------------------TVGRPLP 368
Query: 371 HVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
+VE+K+ G+ G + TRG HVM Y+ A V + WL TGD+ +D
Sbjct: 369 NVEVKIVEPGTEKEVAPGVQGELCTRGYHVMKGYYKNQQATREVIKEDGWLHTGDLAVMD 428
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G + GR I GGEN+YP E+E L QHP I+ VVG+ + + E V A ++L
Sbjct: 429 EAGYCRITGRLKDMIIRGGENIYPREIEEFLYQHPDILDAQVVGVPDEKYGEAVSAWIKL 488
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ + ++SE +R C+ K + +K PR ++ + +P+T++GK+
Sbjct: 489 KPG----------------VSVTSEEIRDFCQGK-VAHYKIPR-YIEFVDDYPMTASGKV 530
Query: 545 RRDEVRR 551
++ ++R+
Sbjct: 531 QKFKLRQ 537
>gi|89097499|ref|ZP_01170388.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
gi|89087795|gb|EAR66907.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
Length = 586
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 147/564 (26%), Positives = 249/564 (44%), Gaps = 82/564 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+VV T T +F Q A+GL+++G+ G+ +A+ A N+ +L A +G
Sbjct: 56 EAVVYHTEGLRMTYHEFDQYCRKAAKGLMKLGIEKGENLAVWAANTPEWLACQFATGKMG 115
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIPSLRWHVSLGSSSS 140
++ +N + E + L+ E+ S Y+++ + +P LR S
Sbjct: 116 AVLVTVNTNYQASELEYLLKQSESSTLILQENYRGSSYIDMLYEIVPELR-----KSEPG 170
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWA----------------------PEGAVIICF 178
+K+ +I+ S P + W P+ + + +
Sbjct: 171 KLKSKKLPFLKNIIV-MSKNRYPGAYCWEDILQLSEEVKDRDLDRRMELLDPDDVINMQY 229
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVG 237
TSGTTG PKGV+++H+ +I + + G++D P H G + +A + VG
Sbjct: 230 TSGTTGFPKGVMLTHANIINNAYHIAGCMELGKEDRLCIPVPFFHCFGCVLGTLACVSVG 289
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILN 294
A + + +F K L V+ T L VP + +A+L ++ G D S++ +
Sbjct: 290 ATMLPVREFSPKEVLLTVQNEKCTGLHGVPTMFIAELN-----DPSFGGYDLSSLRTGIM 344
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G P E+MK A++ AYG TE+S +T DP
Sbjct: 345 AGSNCPIEVMKAVIEKMGAAEITIAYGQTESSPVITQTRTDDPI---------------- 388
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSV 408
+ + VGK PHVE+K+ + G+SH G + TRG HVM Y++ A
Sbjct: 389 ----ELRVESVGKALPHVEVKIVTPGTSHEVPRGTQGELCTRGYHVMKGYYNNPDATKEA 444
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
E WL TGD+ +D+ G + GR + GGEN+YP E+E L HP ++ + V G
Sbjct: 445 IDSEGWLHTGDLAVMDENGYCSITGRLKDMVIRGGENIYPREIEEFLYTHPKVLDVQVTG 504
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + E ++A + L+E + + K E LR CR K ++ K PR
Sbjct: 505 VPDPVFGEELMAWIILKEG--------ETAGK--------EELRSFCRGK-ISRHKIPRY 547
Query: 529 FVLWRKPFPLTSTGKIRRDEVRRE 552
F + K +P+T++GKI++ ++R +
Sbjct: 548 FE-FVKEYPMTASGKIQKFKLREK 570
>gi|443476927|ref|ZP_21066807.1| 2-succinylbenzoyl-CoA synthetase [Pseudanabaena biceps PCC 7429]
gi|443018020|gb|ELS32344.1| 2-succinylbenzoyl-CoA synthetase [Pseudanabaena biceps PCC 7429]
Length = 534
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 254/568 (44%), Gaps = 69/568 (12%)
Query: 13 LSRIAAVKRNSV-------VTITGNRHNTGQQFVQDVLNLARGLLEI-GLRSGDIVAISA 64
LS+ A K++++ V +T N Q ++D +NL L+ G+RSGD V +
Sbjct: 7 LSQRAVQKKDAIALSFRDGVNLTANTWTYAQ--LEDEVNLWVAQLQAWGIRSGDRVGLLL 64
Query: 65 LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWY-----L 119
N Y+ + A+ + LN R + KE S I + L+ D+ + S L
Sbjct: 65 ANQPRYITLVHAMTRCEAVAVFLNIRLTAKEISWQIEDSQVSYLLYDQFTRSTTQEFKDL 124
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF------THSWAPEGA 173
E ++ +L + + S SD D+ + + + R P + S E
Sbjct: 125 EFKNLEFKNLEFENPIKVSYSDI---SDIDYSSLNSLFRDRCNPLEKRQFGSESINLENL 181
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM 233
I +TSGTTG PKGV +++ ++A +G DD +L P+ H+GGL+
Sbjct: 182 QGIFYTSGTTGKPKGVPLTYGNHFHSAIASALNLGLQSDDNWLLCMPMFHVGGLAIIWRS 241
Query: 234 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
+ G +PKF+ + LEA+ VT + VP ++ L W+ ++ IL
Sbjct: 242 AIYGTKLTLLPKFDEREVLEAIASERVTLISLVPTMLTRLLE----HSLWQNLQQLRGIL 297
Query: 294 NGGGGLPSELMKEATN-SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
GG EL+ + P ++ YGMTET+S +T + + L+ GN
Sbjct: 298 LGGAPASPELIAHGQQLNLP---IMPTYGMTETASQITTLRTEEIALKQGSSGLPLLGNS 354
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYW-----DQFLAKPS 407
V EL S +G+IL +GA VM Y D+ + S
Sbjct: 355 LR---------IVDLDDAQRELP-----SGEIGQILVQGASVMSGYLHTDHTDRTDRQQS 400
Query: 408 VSTG--EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
G + WL TGD+G +D G +++V RR+ I SGGEN+YP E+E +LL HP I
Sbjct: 401 QFQGIADGWLHTGDMGYLDRDGYLYVVSRRSDLIISGGENIYPTEIETILLSHPAIAEAC 460
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
VVGI + E V A + + N +L L+ +R C +K+L +K
Sbjct: 461 VVGILDREWGEFVAAILV-------------TNHNNNQLTLTE--IRDFCEQKSLARYKL 505
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREV 553
P+ +W K P T++GK+ R ++R ++
Sbjct: 506 PKEIYVW-KSLPKTASGKLLRQQIRNQI 532
>gi|408528321|emb|CCK26495.1| Putative acyl-CoA synthetase YngI [Streptomyces davawensis JCM
4913]
Length = 529
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 238/555 (42%), Gaps = 71/555 (12%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L+R AA R ++V + R T Q + DV LA LL G+ GD V I A+N
Sbjct: 24 LARTAATWPDREALVDVPSGRRWTYAQLLADVDELAYALLASGVGRGDRVGIWAVNCP-- 81
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQH 123
EW+L A A IG I+ +N + E + +L ++SD ++
Sbjct: 82 -EWVLVQYATARIGAIMVNINPAYRTHEVEYVLKQAGISLLFASLGHKTSDYRAMVDEVR 140
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P LR V GS S D + R + A LP S + V I +TSGTT
Sbjct: 141 GNCPDLREAVYFGSPSWDALLARAVPAA----------LPDDLSC--DDPVNIQYTSGTT 188
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ ++ Y E D P H G+ +A GAC V
Sbjct: 189 GFPKGATLSHHNILNNGYFVGELIAYTEQDRVCLPVPFYHCFGMVMGNLAATSHGACIVI 248
Query: 243 -IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
P FE K+ LEAV+Q TSL VP + +A L S++ + G P
Sbjct: 249 PAPSFEPKATLEAVQQERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPV 306
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK + ++ YGMTETS T T D LE H+
Sbjct: 307 EVMKRVVSEMNMTEVSICYGMTETSPVST-QTRRDDDLE-----------------HRTG 348
Query: 362 GVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ PHVE+K+ + G + TRG VML YW++ W+
Sbjct: 349 --TVGRVLPHVEVKIVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPERTDEAVDPARWM 406
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ + + G V +VGR I GGEN+YP E+E L HP I + V+G+ + R
Sbjct: 407 HTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVIGVPHERYG 466
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V+ACV R+ + E +R C E L +K P +
Sbjct: 467 EEVLACVIPRDPADPP---------------TLEDVRAFC-EGQLAHYKVPAGVRVLDN- 509
Query: 536 FPLTSTGKIRRDEVR 550
FP+T +GK+R+ E+R
Sbjct: 510 FPMTVSGKVRKIELR 524
>gi|359425223|ref|ZP_09216323.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358239311|dbj|GAB05905.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 551
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 241/558 (43%), Gaps = 80/558 (14%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAP 86
+R T ++F +DV +A GLL IG+ +GD V + + N EW++ A A IG I+
Sbjct: 49 DRSWTYEEFHRDVRAVAAGLLRIGVDTGDRVGLWSPNRA---EWVIVQYATAEIGAILVN 105
Query: 87 LNYRWSFKEASRAITSIR-PVMLVTDESSDSWY---LELQHTAIPSLR---------WHV 133
+N + E + V+L TD DS Y L A P LR W
Sbjct: 106 INPAYRQTELEYVLNQAGVSVVLATDRFKDSEYAAMLGQAQPACPGLREVVLFDSPGWQA 165
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
L + D + + A S +P+ + I +TSGTTG PKG +SH
Sbjct: 166 MLSEPAPDEAARVGQIAA---------------SLSPDDPINIQYTSGTTGFPKGATLSH 210
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKSA 251
+ ++ Y + D P H G + +A GA V P F+ ++
Sbjct: 211 RNIGNNGYLVGELLEYTDTDRICLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPEAT 270
Query: 252 LEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AVE+H TSL VP + +A+L L S++ + G P +M+ +
Sbjct: 271 LRAVERHRCTSLYGVPTMFIAELDLLDHAGSAAYDLSSLRTGIMAGSPCPEAVMRRVVDE 330
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++ YGMTETS ++ T D LE + VG+ P
Sbjct: 331 MHMSQVSICYGMTETSP-VSMQTRTDDPLEL-------------------RVGTVGRVGP 370
Query: 371 HVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+K+ + VG TRG VM YWDQ + W+ TGD+ +
Sbjct: 371 HLEIKMIDPVTGETVPRGRVGEFCTRGYSVMKGYWDQPDKTAEAIDADGWMRTGDLAVMR 430
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V + GR + GGEN+YP E+E L HP I+ V+G+ + E ++A +RL
Sbjct: 431 ENGYVEITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDDSYGEELMAWIRL 490
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R D +S L+ E +R+ K + K PR +V + FP+T TGKI
Sbjct: 491 R----------DGASG-----LTVEQVREFATGK-IARHKIPR-YVHIVEAFPMTVTGKI 533
Query: 545 RRDEVRREVMSHLKSLPS 562
R+ +R E M L PS
Sbjct: 534 RKVAMREESMGLLGDPPS 551
>gi|304317081|ref|YP_003852226.1| AMP-dependent synthetase and ligase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778583|gb|ADL69142.1| AMP-dependent synthetase and ligase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 563
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/531 (27%), Positives = 238/531 (44%), Gaps = 52/531 (9%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SI 103
LA+GLL IG++ GD +AI A N ++ + A A IG + P+N + E I S
Sbjct: 64 LAKGLLNIGIKKGDHIAIWASNVPEWVITLFATAKIGCPIVPMNTEYRENELQYVIKQSD 123
Query: 104 RPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKG---YSLR 160
+++ D D Y+ + IPSL+ S++F N + ++ YS
Sbjct: 124 AKALILIDGYKDLDYVRTIYNLIPSLQKTDKENLHSNEFPNLKYVINIGEKCNPGMYSFN 183
Query: 161 SL-------------PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 207
+ +S P+ + I +TSGTT PKG +++H L+ A +
Sbjct: 184 EILMMGEQYDDDMVYEIQNSLKPDEVIDIQYTSGTTDFPKGAMLTHYGLLNNGDAIATRM 243
Query: 208 GYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITV 266
+ E+D T PL H G + S MA L GA V + F +EA+++ T+ V
Sbjct: 244 KFTENDKLCITVPLFHCFGYTLSVMACLSKGATMVLVDHFNPVKVMEAIDKEKCTAFNGV 303
Query: 267 PAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
P + + K +++ + G P ++M+ + ++ S YG+TE S
Sbjct: 304 PTMFITMLNHQDFDKF--DFSTLRTGIMAGSVCPKKVMEAVVDKMNMREITSVYGLTEAS 361
Query: 327 SSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR 386
+T T D +LE G V P GV + P LK GS G
Sbjct: 362 PGIT-QTSVDDSLE---DRVSTVGYVFP-------GVDIKIVDPKT-LKEVPIGSE--GE 407
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
I+ RG +VM Y+ + WL TGDIG +DD G + + GR I GGEN+
Sbjct: 408 IMARGYNVMKGYYKMKEETEKAIEKDGWLHTGDIGKLDDRGYLKITGRLKDMIIRGGENI 467
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
P E+E L HPG+ + +VG+ + + E ++A + +E + C +
Sbjct: 468 SPTEIEECLYHHPGVKDVQIVGVPDEKYGEEIMAYIIPKEGY------C----------I 511
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+E +R++ R+K L FK P+ +V FP T++GKI++ +R M+ L
Sbjct: 512 EAEDIREYARKK-LARFKVPK-YVKIIDEFPKTASGKIQKYRLREMAMAEL 560
>gi|111022097|ref|YP_705069.1| CoA synthetase [Rhodococcus jostii RHA1]
gi|110821627|gb|ABG96911.1| CoA synthetase [Rhodococcus jostii RHA1]
Length = 511
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 151/546 (27%), Positives = 233/546 (42%), Gaps = 56/546 (10%)
Query: 15 RIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
RI +N + G R T ++ LA GL +G+ GD V N LE +
Sbjct: 13 RITMTPKNEALVFDG-RAVTYEEMALRTRRLAHGLRALGVEKGDCVGFFGFNDPAALEVM 71
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS 134
A +G PLN R + +EA + R ++ + EL + P W +
Sbjct: 72 FAAGLLGATYLPLNARLTAEEARFVLGDSRCTTVIFGDQQADVAQELAQSDTPVTTW-IG 130
Query: 135 LGSSSSDFVN---KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
LG S S + I + L L ++ ++SGTTG+PKGV++
Sbjct: 131 LGDSWSTHTYEGVRAGQPDTRIDEQVGLDDLS-----------VLMYSSGTTGAPKGVML 179
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFIPKFESKS 250
SH ++ +L ++ + L APL HIGG+ A+ L+ G V + KF++
Sbjct: 180 SHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPTLLNGGTVVLLRKFDAGV 239
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+ +E+ +T+ VP ++ +L R S++ I G LP L+ +
Sbjct: 240 VLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAICVAGAPLPEALISPWQDR 297
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ AYG+TET+ S+T ++ D + + F T V +P G
Sbjct: 298 --DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FTDVDVVRPDG-------- 345
Query: 371 HVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
S + +G I+ +G +VML Y +Q A + WL TGD G DD G ++
Sbjct: 346 ------SSAEPNEIGEIVAKGPNVMLGYLNQPEATARTIV-DGWLHTGDAGYFDDEGFLF 398
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ R SGGENVYP EVEA LL+ GI V+G+ + + W
Sbjct: 399 ICDRYKDMYISGGENVYPAEVEAALLKLDGIREAAVIGVPHEK----------------W 442
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E+ L E +R REK L GFK P F+ + P T+TGKIR+ ++R
Sbjct: 443 GETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIAEALPRTATGKIRKPDLR 500
Query: 551 REVMSH 556
+ S
Sbjct: 501 KLAASQ 506
>gi|408826805|ref|ZP_11211695.1| AMP-binding domain protein [Streptomyces somaliensis DSM 40738]
Length = 541
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 239/548 (43%), Gaps = 67/548 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T +F V LAR LL G+ GD V I A+N EW+L A
Sbjct: 36 DREALVDVPSGRRWTYAEFGAAVDELARALLASGVERGDRVGIWAVNCP---EWVLVQYA 92
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL-ELQHTAIPSLRWH 132
A IG I+ +N + E + + +LV ++SD L E +LR
Sbjct: 93 TARIGAIMVNINPAYRAHELAYVLDQAGVSLLVASLAHKTSDYRALVEEVRAGRTALRET 152
Query: 133 VSLGSSSSDFVNKR--DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
V +G +S + R + A+ +L S + V I +TSGTTG PKG
Sbjct: 153 VHIGDASWGALIARAASVGAAEPAAREALLSC--------DDPVNIQYTSGTTGFPKGAT 204
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFES 248
+SH ++ +GY E+D P H G+ +A + GAC V P F+
Sbjct: 205 LSHHNILNNGFFVGEALGYTEEDRICLPVPFYHCFGMVMGNLAAVSHGACIVIPAPSFDP 264
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
+ L AV+Q TSL VP + +A L S++ + G P E+MK
Sbjct: 265 AATLRAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGIMAGSPCPVEVMKRVV 322
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
A++ YGMTETS ++ T D LE + VG+
Sbjct: 323 TEMNMAEVSICYGMTETSP-VSTQTRRDDDLER-------------------RTGTVGRV 362
Query: 369 APHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PHVE+KV S G + TRG VML YWD+ W+ TGD+
Sbjct: 363 LPHVEVKVVDPASGTTLPRGEAGELCTRGYGVMLGYWDEPERTAEAVDRGRWMHTGDLAV 422
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+ + G + +VGR I GGENVYP E+E L HP + + VVG+ + R E V+ACV
Sbjct: 423 MREDGYLQIVGRIKDMIIRGGENVYPREIEEFLYSHPKVADVQVVGVPDERYGEEVLACV 482
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
R+ + E + +CR++ L +K PR + FP+T +G
Sbjct: 483 IPRDPADPP---------------TYEEIAAYCRDR-LAHYKVPRRVEVL-DAFPMTVSG 525
Query: 543 KIRRDEVR 550
K+R+ E+R
Sbjct: 526 KVRKVELR 533
>gi|134294240|ref|YP_001117975.1| AMP-binding domain-containing protein [Burkholderia vietnamiensis
G4]
gi|134137397|gb|ABO53140.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
Length = 575
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 156/555 (28%), Positives = 251/555 (45%), Gaps = 80/555 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
++F +V LA GL+E+G+ GD V I + N SEW L A A IG ++ +N +
Sbjct: 62 REFAHEVDVLAAGLVELGIVKGDRVGIWSPNRSEWLLTQ-FATARIGAVLVNINPAYRLA 120
Query: 95 EASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSLGS 137
E A+ + ++ + S Y+E+ T +PSLR VS+G
Sbjct: 121 ELEYALNKVGCKAVIAAERFKSSAYVEMLQTIAPELASATPGDLHAARVPSLRTVVSMGD 180
Query: 138 -SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+ + D++ D L L ++ T A A+ I FTSGTTGSPKG ++H
Sbjct: 181 VAPAGMFRFADVMARGRDTLDAARLDAIGAT--LAAGEAINIQFTSGTTGSPKGATLTHR 238
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSAL 252
++ + + + + E D PL H G+ A +A + GA VF + F+ + L
Sbjct: 239 NVVNNARSIAMAMRFTEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATL 298
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
AV T+L VP + +A L + +++ + G P E MK +
Sbjct: 299 AAVADERCTALHGVPTMF--IAELDHPEFKTFDLSTLRTGIMAGSPCPIETMKRVVSQMH 356
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+++ AYGMTETS P +F + T + + + + VG+ PH+
Sbjct: 357 LSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRIQPHL 396
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIGSI 423
E+K+ G V G + T+G VML YWD T EV W+ TGD+ ++
Sbjct: 397 EVKIVDPGGDIVPVGATGELCTKGYSVMLGYWDD-----DAKTREVLIDGWMHTGDLATL 451
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G +VGR + GGENVYP E+E L +HP I V G+ +A+ E + A +
Sbjct: 452 DGQGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGLPDAKYGEELCAWIV 511
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
LR Q ++ + +R C + + +K PR ++ + P+T TGK
Sbjct: 512 LRAGEQMTDDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELPMTVTGK 553
Query: 544 IRRDEVRREVMSHLK 558
+++ +R ++ LK
Sbjct: 554 VQKFVMRERMIEELK 568
>gi|389574151|ref|ZP_10164220.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
gi|388426340|gb|EIL84156.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. M 2-6]
Length = 545
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 244/548 (44%), Gaps = 64/548 (11%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
+ F Q+V +GL+ +G++ GD +AI A N +L A A IG ++ +N + +E
Sbjct: 38 EAFYQEVKATGKGLMALGVQKGDHIAIMAPNIPEWLILQFACASIGAVLVTVNTNFQSQE 97
Query: 96 ASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-KR------- 146
+ + S ++ + D ++ Y+ + IP L+ +S+ F KR
Sbjct: 98 LAYLLKHSDSKMLFIVDGFKETSYVNMLEELIPELQTAHQEEITSTQFPYLKRCIYIGQH 157
Query: 147 ---DMLTADILKGYSLRSLPFT-----HSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
ML+ D L+ + R+ + P+ + + +TSGTTG PKGV++SH+ ++
Sbjct: 158 VPNGMLSWDRLQVAAKRTEELEWEKRMNELTPDDVINMQYTSGTTGYPKGVMLSHTNIVC 217
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQ 257
+ + E D P H G + +A L G + + F + L+ VE+
Sbjct: 218 NASQIADCMKLTEQDRMCIPVPFFHCFGSVLGVLACLTKGGTIIPLESFHPERVLQTVEK 277
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
T L VP + +A L +++ + G PS +MK +L
Sbjct: 278 EKCTVLHGVPTMF--IAELDHPNFHSYDLSTLRTGIMAGSLCPSHVMKAVIEKMGLKELT 335
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYG TE+S +T T D + E Q VG+ P +E+K+
Sbjct: 336 IAYGQTESSPVIT-QTRTDDSFERRVQ-------------------TVGRALPQIEVKIT 375
Query: 378 SDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
G+S G + TRG HVM Y+ A V + WL TGD+ +D G V +
Sbjct: 376 LPGTSEEVPRGQQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTGDLAEMDHDGYVKI 435
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
GR I GGENVYP+E+E VL HP I+ VVGI + E A +RL++
Sbjct: 436 TGRLKDMIIRGGENVYPKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGKS-- 493
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+S E L +C+ + + +K P+ F + + +P+T++GKI++ +++
Sbjct: 494 --------------VSIETLTSYCQSQ-MARYKIPKYFFITDE-YPMTASGKIQKFRLKK 537
Query: 552 EVMSHLKS 559
+ + +K
Sbjct: 538 QALDLIKE 545
>gi|365866103|ref|ZP_09405729.1| AMP-binding domain protein [Streptomyces sp. W007]
gi|364004493|gb|EHM25607.1| AMP-binding domain protein [Streptomyces sp. W007]
Length = 535
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 239/559 (42%), Gaps = 65/559 (11%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R AA R ++V + R T +FV DV LAR L+ G+ GD V I A+N
Sbjct: 20 IGRNLDRAAAAHGDREALVDMASGRRWTYTEFVADVDVLARALMASGVAKGDRVGIWAVN 79
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYLE 120
EW+L A A IG ++ +N + E + +LV + +SD L
Sbjct: 80 CP---EWVLVQYATARIGAVMVTINPAYRAHEVEFVLKQAGISLLVASLSHRTSDYRALV 136
Query: 121 LQHTA-IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
Q A P LR +G S D LTA R + + + I +T
Sbjct: 137 EQIRADCPGLRAVHYIGDPSWD------ELTAAAPAVTRERLGAREAELSCDDPINIQYT 190
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 238
SGTTG PKG +SH ++ + Y ++D P H G+ +A GA
Sbjct: 191 SGTTGFPKGATLSHHNILNNGYFVGETIAYTQEDRICVPVPFYHCFGMVMGNLAGTSHGA 250
Query: 239 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
C V P FE + L AV+Q TSL VP + +A L S++ + G
Sbjct: 251 CIVIPGPSFEPAAVLTAVQQERCTSLYGVPTMF--IAELNLPDFAAYDLSSLRTGIMAGS 308
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P+E+MK A++ YGMTETS T D G
Sbjct: 309 PCPAEVMKRVVAEMHMAEVSICYGMTETSPVSTQTRRDDDLDRRTGT------------- 355
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
VG+ PH+E+KV + VG + TRG VML YWDQ
Sbjct: 356 -------VGRALPHIEIKVVDPVTGVTLPRGSVGELRTRGYGVMLGYWDQPDRTAEAVDA 408
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD+ + + G V + GR I GGENVYP E+E L HP + + VVG+ +
Sbjct: 409 GRWMRTGDLAVMREDGYVQVAGRIKDMIIRGGENVYPREIEEFLYGHPKVADVQVVGVPD 468
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
R E ++ACV R+ + E + +CRE+ L +K PR +
Sbjct: 469 ERYGEEILACVIPRDPADPP---------------TLEEIAAYCRER-LAHYKIPRRLRI 512
Query: 532 WRKPFPLTSTGKIRRDEVR 550
+ FP+T +GK+R+ E+R
Sbjct: 513 L-ETFPMTVSGKVRKIELR 530
>gi|228914550|ref|ZP_04078159.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228844869|gb|EEM89911.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 496
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 249/557 (44%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ E+ ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIVNFVEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P+ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPAELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
N + L +GMTETS ++ ++ D + +
Sbjct: 284 FIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + + + + VG +L RG +VM YW++ A K ++ G WL TGD
Sbjct: 320 GKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKETIQDG--WLYTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG
Sbjct: 378 LAKVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG----------- 426
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
R+ +W E+ K +L+ + + +HCR L +K P+ +++ K P
Sbjct: 427 -----RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKYKIPKE-IIFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLTNQLKSR 496
>gi|302522672|ref|ZP_07275014.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
gi|302431567|gb|EFL03383.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. SPB78]
Length = 538
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 247/558 (44%), Gaps = 63/558 (11%)
Query: 9 ICQCLSRIAAVK--RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L+RI A R ++V + R T F + V LARGLL G+ GD V I A+N
Sbjct: 20 IGENLARIIAAHPGREALVDVPSRRRWTYSAFGEAVERLARGLLARGVLKGDRVGIWAVN 79
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD----ESSDSWYLELQ 122
S ++ A A +G ++ +N + E + +LV ++ +++
Sbjct: 80 SAEWVMLQYATARVGAVLVNINPAYRAHELGYVLRQSGTQLLVASLRHRDTDYRAFVDEV 139
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADI-LKGYSLRSLPFTHSWAPEGAVIICFTSG 181
P LR V +G S D + ADI L R + + V + +TSG
Sbjct: 140 RPECPELRETVYIGDPSWDALVD---AGADIPLAQLHAREAELSC----DDPVNLQYTSG 192
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACH 240
TTG PKG +SH L+ +GY D P H G+ + GAC
Sbjct: 193 TTGFPKGATLSHHNLLNNGFWVGETIGYTPSDRVCLPVPFFHCFGMVMGNLGATSHGACI 252
Query: 241 VF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V P FE+++ LEAVE+ T+L VP + +A L S++ + G
Sbjct: 253 VIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMAGSPC 310
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P E+MK A++ YGMTETS ++ T D LE H+
Sbjct: 311 PVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE-----------------HR 352
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 353 TG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVVDPGR 410
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+ +AR
Sbjct: 411 WMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGVPDAR 470
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLW 532
E V+ACV R+ D + ++ +R CR++ L +K P R+ VL
Sbjct: 471 YGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRVEVL- 513
Query: 533 RKPFPLTSTGKIRRDEVR 550
FP+T +GK+R+ E+R
Sbjct: 514 -GTFPMTVSGKVRKIELR 530
>gi|443673957|ref|ZP_21139000.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443413383|emb|CCQ17339.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 538
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 160/562 (28%), Positives = 242/562 (43%), Gaps = 74/562 (13%)
Query: 13 LSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R AA R++++ +T R T +FV DV LA GLL G+ GD V + A N
Sbjct: 22 LDRTAAKYSDRDALIDVTSGRRWTYSEFVADVDLLAAGLLVAGVAVGDRVGMWAPNCP-- 79
Query: 71 LEWILA---VAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLEL---QH 123
EW+LA A IG ++ +N + E + V+L E S Y +
Sbjct: 80 -EWVLAQYATAKIGAVLVNINPAYRAHELQFVLKQAGVSVLLSAGEFKGSDYAAIIAGVR 138
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+P+LR + +G+ + + R L + + A+ I +TSGTT
Sbjct: 139 PEVPTLREVLFIGTIQWEAMTDRGHRA---LAKTPKMITDVSEQLRADDAINIQYTSGTT 195
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL--------SSAMAMLM 235
G PKG +SH ++ + Y +D P H G+ S AM++
Sbjct: 196 GFPKGATLSHRNILNNGFFVGELCHYTAEDRVCIPVPFYHCFGMVMGNLACTSHGAAMVI 255
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
G P F+ + L AV TSL VP + L + G S++ +
Sbjct: 256 PG------PSFDPVATLTAVASEKCTSLYGVPTMFIAELALENFGEFDLG--SLRTGIMA 307
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P+E+MK+ + ++ YGMTETS P + + +
Sbjct: 308 GSPCPTEVMKQVIDRMGMTEVSICYGMTETS-------------------PVSLQTRSDD 348
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 409
S+ Q + VG+ PH+E+K+ H G + TRG VML YW+Q
Sbjct: 349 SIEQ-RVSTVGRVGPHLEVKIVDPVLGHTVPRGDAGELCTRGYSVMLGYWEQPEKTAEAI 407
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
E W+ TGDIG +D+ G V + GR + GGENVYP EVE L HP I+ V+G+
Sbjct: 408 DDERWMHTGDIGVMDEDGYVAITGRIKDMVIRGGENVYPREVEEFLYTHPDILDAQVIGV 467
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+A+ E ++ +R+R+ L S +R C + L +K PR +
Sbjct: 468 PDAKYGEELMVWIRMRDV---------------AAPLDSAAVRAFC-DGRLAHYKIPR-Y 510
Query: 530 VLWRKPFPLTSTGKIRRDEVRR 551
V FP+T TGK+R+ E+R
Sbjct: 511 VHVVDEFPMTVTGKVRKVEMRE 532
>gi|345002934|ref|YP_004805788.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
gi|344318560|gb|AEN13248.1| AMP-dependent synthetase and ligase [Streptomyces sp. SirexAA-E]
Length = 536
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 242/548 (44%), Gaps = 67/548 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R ++V + R T +F V LAR L+ G+ GD V I A+N EW+L A
Sbjct: 34 EREALVDVASGRRWTYAEFGAAVEELARALMASGVAKGDRVGIWAVNCP---EWVLVQYA 90
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYLELQHTA-IPSLRWH 132
A IG ++ +N + E + +LV + SSD L Q A P+LR
Sbjct: 91 TARIGAVMVNINPAYRAHELRFVLDQAGISLLVASLSHRSSDYRALVDQVRADCPALRAV 150
Query: 133 VSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+G +S D V +T + L + + + I +TSGTTG PKG +
Sbjct: 151 HYIGDASWDDLVRASASVTPEQLAAREA-------ELSCDDPINIQYTSGTTGFPKGATL 203
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESK 249
SH ++ +V Y E D P H G+ + + GAC V P FE
Sbjct: 204 SHHNILNNGYFVGEMVAYTEHDRVCLPVPFYHCFGMVMGNLGITSHGACIVIPAPAFEPA 263
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ LEAV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 264 AVLEAVQRERCTSLYGVPTMF--IAELDLPDFAAYDLSSLRTGIMAGSPCPVEVMKRVVA 321
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ YGMTETS ++ T D LE + VG+
Sbjct: 322 EMHMEEVSICYGMTETSP-VSTQTRRDDDLER-------------------RTGTVGRAL 361
Query: 370 PHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+KV +D + V G + TRG VML YWD+ V W+ TGD+
Sbjct: 362 PHIEVKV-TDPVTGVTLPRGAAGELCTRGYSVMLGYWDEPERTAEVVDAGRWMHTGDLAV 420
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+ + G V ++GR I GGENVYP E+E L HP I + VVG+A+ + E ++ACV
Sbjct: 421 MREDGYVRIIGRIKDMIIRGGENVYPREIEEFLYGHPKIADVQVVGVADEKYGEEILACV 480
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
R+ + E + +CRE+ L +K PR + FP+T +G
Sbjct: 481 IPRDPAAPP---------------TLEEVTAYCREQ-LAHYKIPRRLRIL-DTFPMTVSG 523
Query: 543 KIRRDEVR 550
K+R+ ++R
Sbjct: 524 KVRKIDLR 531
>gi|407647404|ref|YP_006811163.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
gi|407310288|gb|AFU04189.1| AMP-binding domain protein [Nocardia brasiliensis ATCC 700358]
Length = 541
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 162/558 (29%), Positives = 239/558 (42%), Gaps = 64/558 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R ++V T +R T ++ + LA GL G+ GD V I A N +EW+ A A
Sbjct: 33 DREALVDKTSDRRWTYRELAAAIDALATGLAARGIAKGDRVGIWAPNCAEWFFAQ-YATA 91
Query: 79 FIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
IG I+ +N YR S E +R V++ E S Y+ + P+L +
Sbjct: 92 KIGAILVNINPAYRTSELEYVLRQAGVR-VLIAAAEFKTSNYVAMIDEVRPNCPALEQVL 150
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
LG+ + D L + L +L S + + I +TSGTTG PKG +SH
Sbjct: 151 ILGTP------EWDELAGTAIDPDRLATLAAELSI--DDPINIQYTSGTTGFPKGATLSH 202
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + GY E D P H G+ A V IP F+ +
Sbjct: 203 HNILNNGFFVGELCGYTEQDRICVPVPFYHCFGMVMGNLAATSHAATVVIPAPAFDPVAT 262
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AVE TSL VP + +A L + S++ + G P E+MK +
Sbjct: 263 LAAVEAERCTSLYGVPTMF--IALLTELDSATPDLSSLRTGIMAGSPCPVEVMKRVIDRM 320
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS ++ T D ++ + VG+ PH
Sbjct: 321 GMHEVCICYGMTETSP-VSTQTRRDDGIDR-------------------RTATVGRVGPH 360
Query: 372 VELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + G + TRG VML YW W+ TGDIG +DD
Sbjct: 361 LEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWSDPGKTAEAIDAARWMHTGDIGVMDD 420
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VR+R
Sbjct: 421 DGYLAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDPKYGEELMAWVRMR 480
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
E L + +R+ C K L FK PR +V FP+T TGKIR
Sbjct: 481 EG---------------AAPLDATSVREFCTGK-LAHFKIPR-YVHVVDEFPMTVTGKIR 523
Query: 546 RDEVRREVMSHLKSLPSN 563
+ E+ RE+ L +LP
Sbjct: 524 KAEM-RELSRALLALPDQ 540
>gi|218782705|ref|YP_002434023.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218764089|gb|ACL06555.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 516
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 236/533 (44%), Gaps = 62/533 (11%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
+F + + A LL +G++ GD +A S + +A IG +V PL+ R+ E
Sbjct: 33 EFDRQIDQAANALLNMGMKPGDKIATLLPQSPAFSTLFMAAGRIGMVVVPLDPRFKAGEM 92
Query: 97 SRAITSIRPVMLVTDESSDSWYLELQHTAIPSL----RWHVSLGSSSSDFVNKRDMLTAD 152
+P +L T + E++ A SL R +G ++K L +
Sbjct: 93 QALCERTKPRILATLAFPEEIKAEVEQLA--SLYEFERIFYYMG-----VLDKPGALPYE 145
Query: 153 ILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGED 212
L + +P A E II FTSGTTG PKG VISH S A + G
Sbjct: 146 KLLEGDAKPVPEEFHPADEDPYIIIFTSGTTGRPKGAVISHKNSWAISKATTDMWGILHT 205
Query: 213 DVYLHTAPLCHIGGLSSAMA-MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMA 271
D L P H+ G +A GA + +PKF+ L A+E++ ++ VP
Sbjct: 206 DKVLCNMPTSHVAGTHDLLAAQFYAGATGILMPKFDPMETLAAIEKYGISYFGGVPT--- 262
Query: 272 DLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 329
+ LI D SV+ + G EL+++ + +FP ++++++GM+ET+
Sbjct: 263 -MYRLIFKNADVTAHDLSSVRLAVLSGEPSSQELVQQVSQAFPNGRIVASFGMSETAGFF 321
Query: 330 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HV 384
TF T DP P + +G KPAP E+K+ G+ V
Sbjct: 322 TFTTPDDP----------------PERAEKTEG----KPAPGFEMKIVDLHGADLPVGEV 361
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 444
G + RG V+ Y D K +V G+ W+ TGD+G +D+ G + +GR SGG
Sbjct: 362 GEMFVRGDSVINGYMDPEDDK-NVFMGDGWMATGDLGRLDEQGYLIFMGRIKEMYISGGY 420
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 504
NVYP+E+EA L +PG+ V+ + E+ VA V E D
Sbjct: 421 NVYPQEIEAFLNAYPGVNTSAVMETPDEVWGEIGVAFV-------IPEPGVD-------- 465
Query: 505 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
L E L+ HC+ K+L +K PR F++ P + GK+ + E+++ + +L
Sbjct: 466 -LDIEALKAHCK-KHLADYKRPRKFIVTDD-VPRSLIGKVVKKELKKNLDKYL 515
>gi|117920918|ref|YP_870110.1| AMP-binding protein [Shewanella sp. ANA-3]
gi|117613250|gb|ABK48704.1| succinate dehydrogenase, cytochrome b subunit [Shewanella sp.
ANA-3]
Length = 574
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 159/577 (27%), Positives = 254/577 (44%), Gaps = 70/577 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHN--TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SAL 65
I Q L+ IA V + + ++ +Q++ + LA GLL++G+ GD V I S
Sbjct: 34 IGQYLNDIANVYPEQLAVVVNHQDIRWNYRQYLAQIDALATGLLKLGIGPGDRVGIWSPN 93
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLE--- 120
N EW L A A IG I+ +N + +E A+T++ R V + D+ S YL+
Sbjct: 94 NIEWCLTQ-FATAKIGAIMVCINPAYRPEELQYALTNVGCRAV-ICADKFKSSNYLQMLY 151
Query: 121 -------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS 167
LQ A+P L++ + +G+ S + D L ++ S
Sbjct: 152 ELAPELKVCAAGQLQAKALPDLQFVIRMGAEQSPGMLNFDDLLVEVTADDKAALERIAES 211
Query: 168 WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 227
+P A+ I FTSGTTGSPKG +SH ++ + + +D PL H G+
Sbjct: 212 LSPYDAINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCEDKLCIPVPLYHCFGM 271
Query: 228 S-SAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 285
+ L GA VF F+ + LE VE+ T+L VP + +A L +
Sbjct: 272 VLGNLVCLAKGAAAVFPGDSFDPLTTLEVVERERCTALHGVPTMF--IAELEHPEFKRFD 329
Query: 286 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 345
S++ + G P E+M+ N +++ YG TE S L +T D +E
Sbjct: 330 LSSLRTGVMAGATCPEEVMRRVQNLMYMQEVLIGYGQTE-CSPLNHITEIDSPVEK---- 384
Query: 346 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD 400
+ + VG+ PH E+K+ + + G + +RG +M YW+
Sbjct: 385 ---------------RVLTVGRALPHTEVKIVDEFGEVLPINTPGEVCSRGYCIMQCYWN 429
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
+ E WL +GDIG +D+ G V +VGR I GGEN+YP E+E L H
Sbjct: 430 DPEKTAATIDSEGWLHSGDIGQMDEQGYVQIVGRIKDMIIRGGENIYPREIEEKLYTHKD 489
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
+ V G+ + + E V A +++R SE E +R EK
Sbjct: 490 VQDAAVFGVHSDKYGEEVCAWIKIRSGATISE----------------EDIRHFLTEK-F 532
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
FK PR ++ + + +P+T TGKI++ ++R + L
Sbjct: 533 AYFKVPR-YIKFVEQYPMTVTGKIQKFKMRELMYQEL 568
>gi|51244407|ref|YP_064291.1| AMP-binding domain protein [Desulfotalea psychrophila LSv54]
gi|50875444|emb|CAG35284.1| probable long chain fatty acid-CoA ligase [Desulfotalea
psychrophila LSv54]
Length = 572
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 251/552 (45%), Gaps = 76/552 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T ++F + V NLARGL E+GL+ G+ V I + N LEW+L A A +G ++ +N
Sbjct: 65 TYREFSERVDNLARGLAELGLKKGERVGIWSQNR---LEWVLVQFATARLGLVLVNINPA 121
Query: 91 WSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIP--------------SLRWHVSL 135
+E ++ + ++ +D S + Y E+ T IP SLR+ + +
Sbjct: 122 CRLRELDHILSQVDCSAIIFSDRSKFTNYFEMVTTLIPQLLDDSLSPHLNYSSLRFVIRM 181
Query: 136 GSSSSDFVNKRDMLTADILKG-YSLRS-LPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G+ + + AD + Y L LP H P V I FTSGTTG KG +SH
Sbjct: 182 GNELIGNILSLQKIIADGEESHYPLDDILPLLHRDDP---VNIQFTSGTTGQAKGATLSH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSA 251
++ + A + +G D PL H G+ + L GA VF +F K+
Sbjct: 239 FNILNNASNVTARMNFGPGDRLCLPVPLYHCFGMVLGVLGCLSKGASIVFPAERFTPKTT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L+ +EQ T+L VPA+ + ++ S++ + G P E+M+E
Sbjct: 299 LKVIEQEACTALYGVPAMYISMLSVPSF--ALFNLSSLRTGIMAGAPCPIEVMREVVGRM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + +S+ + VG+ PH
Sbjct: 357 HLSEITIAYGMTETS-------------------PVSFQSEVSDSLKN-RVTTVGRVHPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDD 425
V++K+ S V G + TRG VM YW D S+ G W+ TGD+ +D+
Sbjct: 397 VQVKLVSKEGKTVPVGVTGELWTRGYSVMCGYWADPERTAESIQDG--WMRTGDLAVLDE 454
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +VGR + I GEN+YP E+E L HP I + V GI + RL E + A + +R
Sbjct: 455 EGYCSIVGRLSDMILRCGENIYPREIENYLYGHPAIQEVQVFGIPDPRLGEELCAWIIVR 514
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+S+ +RQ CR K + +K P + + P++ TGK +
Sbjct: 515 PEHSLEKSD----------------IRQFCRGK-IASYKIPH-HISFVDEMPMSVTGKPQ 556
Query: 546 RDEVRREVMSHL 557
+ ++R ++ + L
Sbjct: 557 KFKMRAQMCAQL 568
>gi|17545161|ref|NP_518563.1| AMP-binding protein [Ralstonia solanacearum GMI1000]
gi|17427452|emb|CAD13970.1| putative fatty-acid--coa ligase transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 571
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 155/555 (27%), Positives = 260/555 (46%), Gaps = 77/555 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T + F + V LA GL +GL+ G+ + I + N EW+L A A +G I+ +N
Sbjct: 57 TWRAFAEQVDALAAGLHALGLQRGERIGIWSPNR---YEWVLTQFATARLGLILVNINPA 113
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLELQHT----------------AIPSLRWHV 133
+ E A+ + +V E+ S YLE+ T +P+LRW +
Sbjct: 114 YRLTELEYALNKVGCKAIVVAEAFKTSRYLEMLQTLAPELATAQPGALRAAKLPALRWVI 173
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+G ++ + + D + A +G +L T + +P+ A+ I FTSGTTG+PKG ++
Sbjct: 174 RMGEGATPGMIRFDEVIAR-GQGVPAGTLDAITAALSPDDAINIQFTSGTTGAPKGATLT 232
Query: 193 HSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESK 249
H ++ + +A+ G D + + PL H G+ S +A GAC VF + F+
Sbjct: 233 HVNIVNNARFVAMAMNLQGTDRLCV-PVPLYHCFGMVMSVLACAATGACMVFPGEAFDPL 291
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AV + T+L VP + +A L + S++ + G P E+MK
Sbjct: 292 ATLRAVAEERCTALHGVPTMF--IAQLDHPEFPSFDVSSLRGGIMAGSPCPIEVMKRVVA 349
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ AYGMTETS P +F + + + + + VG+
Sbjct: 350 EMHLREITIAYGMTETS-------------------PVSFQSAVTDPLDK-RVTTVGRVQ 389
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+++K+ DG+ V G + TRG VML YWD AK + S + W+ TGD+ +
Sbjct: 390 PHLQVKLV-DGAGEVVPVGEKGELCTRGYSVMLGYWDD-EAKTAESIQDGWMRTGDLATF 447
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G +VGR + GGENVYP E+E L +HP + + V G+ + + E V A +
Sbjct: 448 DADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIV 507
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+ Q ++ E +R+ C + + +K PR ++ + P+T TGK
Sbjct: 508 LKPGQQATQ----------------EEIREFC-QGQIAHYKIPR-YIRFVTEMPMTVTGK 549
Query: 544 IRRDEVRREVMSHLK 558
+++ +R ++ L+
Sbjct: 550 VQKFVMRERMIEELR 564
>gi|403236357|ref|ZP_10914943.1| AMP-binding domain protein [Bacillus sp. 10403023]
Length = 551
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 264/562 (46%), Gaps = 82/562 (14%)
Query: 27 ITGNRHNTGQQF--VQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGI 83
I N+ T Q+ V D+L A+GLL G++ GD VA+ NS EW+ + A+A +G +
Sbjct: 32 IYNNKSYTYQELNLVTDLL--AKGLLHYGVKKGDKVALWLNNSPEWFF-FYYAIAKVGAV 88
Query: 84 VAPLNYRWSFKEASRAITSIRPVMLVTDE--SSDSWYLELQHTA---------------I 126
V P+N R+ + + +L+ E + ++Y L++ A +
Sbjct: 89 VVPVNTRFRTADLEYILNQSDSSLLILGEPYRNANYYEILKNIAPEIESGNSQQLNSERL 148
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA---PEGAVIICFTSGTT 183
P L+ VS+ S+ + ++ D+L LKG + L + + P I +TSGTT
Sbjct: 149 PMLKRVVSVHFSTPNTISFEDLL----LKGKQVPDLELQNRESQVDPNDLFAIFYTSGTT 204
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVF 242
G PKGV+ SH ++ S + D + L PL H+ + A + GAC V
Sbjct: 205 GFPKGVMHSHKMIVNMSNVAERLEMKNTDKILLF-LPLFHVYASQVGLTAACIKGACIVL 263
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI----LNGGGG 298
+ FE K A++ +++ V+ + A+ D+ + +++++ + +G G
Sbjct: 264 MDSFEPKKAIQLIKEEKVSIMYGFDAMYLDM-----MNHPDYNQEAIQTLRVCMCSGTRG 318
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETS--SSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
+ L K N+F K+I++YGMTE++ +SLTF+ T+ + P A
Sbjct: 319 I---LEKVVQNNF---KVINSYGMTESTGVTSLTFLEDSKETIISTNGFPLA-------- 364
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ V P + V + G I +G VML Y+ + V T + WL
Sbjct: 365 -----GLSVNIVDPQTKQAV---STGEYGEICVKGHSVMLGYYKKPEETKEVLTEDGWLY 416
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD G ID+ G + L GR I+ GGENV P EV+AVL+ HP + V + RLTE
Sbjct: 417 TGDKGYIDESGYLHLSGRIKDIIRVGGENVDPLEVDAVLISHPDVFKAYTVAAPDERLTE 476
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
+ A V+L N ++ E L +C+ K + FK P+ ++ + F
Sbjct: 477 VCAAFVQLH---------------NHVADINEEDLIAYCKTK-IASFKVPK-YLFITESF 519
Query: 537 PLTSTGKIRRDEVRREVMSHLK 558
P+T+TGK++R +++ + L+
Sbjct: 520 PMTTTGKVQRFALKQTALKRLE 541
>gi|384104353|ref|ZP_10005302.1| CoA synthetase [Rhodococcus imtechensis RKJ300]
gi|383838239|gb|EID77624.1| CoA synthetase [Rhodococcus imtechensis RKJ300]
Length = 511
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 236/553 (42%), Gaps = 70/553 (12%)
Query: 15 RIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
RI +N + G R T ++ LA GL +G+ GD V N LE +
Sbjct: 13 RIKMTPKNEALVFDG-RAVTYEEMALRTRRLAHGLRALGVEKGDCVGFFGFNDPAALEVM 71
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS 134
A +G PLN R + +EA + R +V + EL + P W
Sbjct: 72 FAAGLLGATYLPLNARLTAEEARYVLGDSRCTTVVFGDQQADVAQELAQSDTPVTTW--- 128
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV----------IICFTSGTTG 184
+G S S +S + + P+ + ++ ++SGTTG
Sbjct: 129 IGLSDS----------------WSTHTYEGVRAGQPDTRIDEQVGLDDLSVLMYSSGTTG 172
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFI 243
+PKGV++SH ++ +L ++ + L APL HIGG+ A+ L+ G V +
Sbjct: 173 APKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPALLNGGTVVLL 232
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
KF++ L+ +E+ +T+ VP ++ +L R S++ I G LP L
Sbjct: 233 RKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAICVAGAPLPEAL 290
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ + + AYG+TET+ S+T ++ D + + F T V +P G
Sbjct: 291 ISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FTDVDVVRPDGS 346
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH +G I+ +G +VML Y +Q A + + + WL TGD G
Sbjct: 347 SA---EPH-----------EIGEIVAKGPNVMLGYLNQPEAT-ARTIVDGWLHTGDAGYF 391
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 392 DDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK---------- 441
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
W E+ L E +R REK L GFK P F+ + P T+TGK
Sbjct: 442 ------WGETGMAFVVAADGTTLDEETVRVRLREK-LAGFKIP-TFIQIAEALPRTATGK 493
Query: 544 IRRDEVRREVMSH 556
IR+ ++R+ S
Sbjct: 494 IRKPDLRKLAASQ 506
>gi|288923180|ref|ZP_06417324.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
gi|288345466|gb|EFC79851.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
Length = 597
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 251/548 (45%), Gaps = 73/548 (13%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGIVA 85
+ G++ T +AR L+ G+R+GD V++ A N+ EW L L V G ++A
Sbjct: 85 VDGDQRLTFADLDARTAEVARALVASGVRAGDRVSVWAPNTCEWAL-VALGVYRAGAVLA 143
Query: 86 PLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLEL--QHTAIPSLRWHVSLGSSSS-- 140
P+N R+ EA+R + T+ ++ V D D+ YL + + A P+L V +GS++
Sbjct: 144 PINSRFKGVEAARILRTAGSRLLFVVDGFLDTDYLTMLAEQPAPPALADIVLMGSATGRA 203
Query: 141 ------DFVNKRD-MLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
DF+ + + A++ + RS T + I FTSGTTG+PKG +++H
Sbjct: 204 GATGWPDFLARAEGQPDAEV----AARSAALTGDDLSD----IVFTSGTTGAPKGAMLTH 255
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSAL 252
A + +VG D YL P H GL S + A L+VGA V P F+ S L
Sbjct: 256 GASTGVYTSWSQLVGLRHGDRYLLVYPFFHTAGLKSGLLACLLVGATLVPHPVFDVPSVL 315
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNS 310
V Q +T L PAI + + G D S++ + G +P EL++ +
Sbjct: 316 RRVAQERITMLPGPPAIYQSI-----LNTDLAGYDLSSLRLAVTGAAAVPVELVRRLRSE 370
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++AYG+TET+ + T D P ++ + G+ P
Sbjct: 371 LGLQTVLTAYGLTETTGTATACRRDD----------------DPETI----AMTSGRAIP 410
Query: 371 HVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
VE+++ D + + G I+ RG +VM Y+D A + WL +GDIG D+
Sbjct: 411 GVEVRIVDDTGAPLPPGEPGEIVIRGYNVMRGYFDNPDATAEAIDADGWLHSGDIGVQDE 470
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
GN+ + R+ GG N YP E+EA+LL+H GI + V+G+ + RL E+ +A V R
Sbjct: 471 AGNIRITDRKKDMFIVGGFNAYPAEIEAMLLEHGGIAQVAVIGVPDERLGEVGMAFVIPR 530
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ S+ + + +K PR V PL +TGKI
Sbjct: 531 AGVTVDPAQVIAWSRER-----------------MANYKVPRR-VEVVDALPLNATGKIV 572
Query: 546 RDEVRREV 553
+ E+R V
Sbjct: 573 KYELRDRV 580
>gi|318057799|ref|ZP_07976522.1| AMP-binding domain protein [Streptomyces sp. SA3_actG]
gi|318080550|ref|ZP_07987882.1| AMP-binding domain protein [Streptomyces sp. SA3_actF]
Length = 544
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 247/561 (44%), Gaps = 69/561 (12%)
Query: 9 ICQCLSRIAAVK--RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L+RI A R ++V + R T F + V LARGLL G+ GD V I A+N
Sbjct: 26 IGENLARIIAAHPGREALVDVPSGRRWTYSAFGEAVERLARGLLARGVLKGDRVGIWAVN 85
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD----ESSDSWYLELQ 122
S ++ A A +G ++ +N + E + +LV ++ +++
Sbjct: 86 SAEWVMLQYATARVGAVLVNINPAYRAHELGYVLRQSGTQLLVASLRHRDTDYRAFVDEV 145
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE----GAVIICF 178
P LR V +G S D + ADI L H+ E V + +
Sbjct: 146 RPECPELRETVYIGDPSWDALVD---AGADI-------PLARLHAREAELSCDDPVNLQY 195
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 237
TSGTTG PKG +SH L+ +GY D P H G+ + G
Sbjct: 196 TSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPSDRVCLPVPFFHCFGMVMGNLGATSHG 255
Query: 238 ACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
AC V P FE+++ LEAVE+ T+L VP + +A L S++ + G
Sbjct: 256 ACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMAG 313
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
P E+MK A++ YGMTETS ++ T D LE
Sbjct: 314 SPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE---------------- 356
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVST 410
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 357 -HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVVD 413
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 414 PGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGVP 473
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLF 529
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 474 DARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRVE 517
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
VL FP+T +GK+R+ E+R
Sbjct: 518 VL--GTFPMTVSGKVRKIELR 536
>gi|120404962|ref|YP_954791.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
gi|119957780|gb|ABM14785.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 1043
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 244/552 (44%), Gaps = 63/552 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ L+R AAV+ ++ RH T + + V LA L G+RSGD VA+ LNS
Sbjct: 7 LSDALARHAAVRPHACALADPRRHTTFGELDERVTRLASALAARGVRSGDRVAVLGLNSI 66
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
+E LA +G I P+N+R + E ++ +V D + +S ++++ +P+
Sbjct: 67 ELVESWLAAHRLGAIAVPVNFRLAAGEIGYVLSDSAATAIVVDVALESMVVQVRQQ-VPA 125
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
L V++G + + D LP + A + I +TSGTTG PKG
Sbjct: 126 LHTVVTIGGNLEQTIAAAD------------PDLPQC-AVADDAPAFIMYTSGTTGFPKG 172
Query: 189 VVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 245
V++H L + + + IA +G+ +DD ++ APL H G+S + M + G V P
Sbjct: 173 AVLTHRNLYLHAFSSIATLGHRSDDDCWMAVAPLFHTAGVSGMLPMFLTGGKTVIPPSGG 232
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + + AV VTS PA + L + R ++++ G + L++
Sbjct: 233 FDPDATIAAVVDEQVTSCWMTPAQWQSVCALPGLAAHDLSR--LRRVWWGAAPASTTLLR 290
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
++F A++I+A+G TE S + D A + V
Sbjct: 291 TMIDTFTGAEIIAAFGQTECSPITCLLRGED-----------AIAKIG----------SV 329
Query: 366 GKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G P +VE++V D VG I+ G VM YW++ G W +GD+
Sbjct: 330 GTPMLNVEVRVVDDEMNDVDRGEVGEIVYLGPLVMKEYWNKAAETAEAFRGG-WFHSGDL 388
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
D G ++V R+ I SGGEN+Y EVE V+ HP + + V+G+ + + E VA
Sbjct: 389 VRQDADGYFYVVDRKKDMIISGGENIYSAEVENVVATHPLVAEVAVIGVPHPKWGETPVA 448
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ RE ++ D + HCR + L +K P+ +V P +
Sbjct: 449 VIVPREP---TDPPTDAE------------IEAHCRAQ-LASYKRPK-YVTLVDVLPRNA 491
Query: 541 TGKIRRDEVRRE 552
GK+ + +R E
Sbjct: 492 AGKVLKGRLRDE 503
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 146/550 (26%), Positives = 244/550 (44%), Gaps = 61/550 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
++V + R T + ++ +LAR L+ IG+ GD V I A N + A A IG
Sbjct: 539 EALVDVPSGRRWTYAELNAEIDSLARALMAIGIEKGDRVGIWAPNCPEWTMLQYATAKIG 598
Query: 82 GIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHT--AIPSLRWHVSLGS 137
I+ +N + E + + +++R ++ T+ + + + +P L + L +
Sbjct: 599 AILVTINPAYRTHELAYVLRHSAVRLLVSATEFKTSDYRAMVAEVRPELPGLAEVLFLAT 658
Query: 138 SSSDFVNKR-DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ +R D+++ D L+ +RSL P A+ I +TSGTTGSPKG +SH +
Sbjct: 659 EDWARLGERADLVSEDELR-CRVRSL------TPGDAINIQYTSGTTGSPKGATLSHRNI 711
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEA 254
+ ++ +G D P H G+ + IP F+ + L A
Sbjct: 712 LNNGYFVTDLIDFGPGDRLCIPVPFYHCFGMVMGNLGCTTHGATMVIPAAGFDPAATLAA 771
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ T++ VP + +A L S++ + G P E+MK N +
Sbjct: 772 IEKEHCTAVYGVPTMF--IAMLGHPDLADCDVTSLRTGIMAGSPCPVEVMKRCVNELKMS 829
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
++ AYGMTETS ++ T + L+ + VG+ PHVE+
Sbjct: 830 EVGIAYGMTETSP-VSCQTRIEDDLDR-------------------RTATVGRAHPHVEI 869
Query: 375 KVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
K+ + + G TRG VML YW D+ + +V + W+ TGD+ + D G
Sbjct: 870 KIVDPDTGEIVKRGTAGEFCTRGYSVMLGYWGDEDRTREAVD-ADGWMHTGDLAVMRDDG 928
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+VGR + GGENVYP E+E L HP I + V+G+ + R E + A +++R
Sbjct: 929 YCMIVGRIKDMVIRGGENVYPREIEEFLHTHPDIDDVQVIGVPDERYGEEICAWIKVRAG 988
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
L + +R+ K L +K PR +V FP+T TGK+R+
Sbjct: 989 ---------------AAPLDAHAVREFAAGK-LAHYKIPR-YVHMTDDFPMTVTGKVRKI 1031
Query: 548 EVRREVMSHL 557
++R E + L
Sbjct: 1032 DMRAETVRIL 1041
>gi|333023626|ref|ZP_08451690.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
gi|332743478|gb|EGJ73919.1| putative AMP-binding domain protein [Streptomyces sp. Tu6071]
Length = 544
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 247/561 (44%), Gaps = 69/561 (12%)
Query: 9 ICQCLSRIAAVK--RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L+RI A R ++V + R T F + V LARGLL G+ GD V I A+N
Sbjct: 26 IGENLARIIAAHPGREALVDVPSGRRWTYSTFGEAVERLARGLLARGVLKGDRVGIWAVN 85
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD----ESSDSWYLELQ 122
S ++ A A +G ++ +N + E + +LV ++ +++
Sbjct: 86 SAEWVMLQYATARVGAVLVNINPAYRAHELGYVLRQSGTQLLVASLRHRDTDYRAFVDEV 145
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE----GAVIICF 178
P LR V +G S D + ADI L H+ E V + +
Sbjct: 146 RPECPELRETVYIGDPSWDALVD---AGADI-------PLARLHAREAELSCDDPVNLQY 195
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 237
TSGTTG PKG +SH L+ +GY D P H G+ + G
Sbjct: 196 TSGTTGFPKGATLSHHNLLNNGFWVGETIGYTPRDRVCLPVPFFHCFGMVMGNLGATSHG 255
Query: 238 ACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
AC V P FE+++ LEAVE+ T+L VP + +A L S++ + G
Sbjct: 256 ACIVIPAPSFEARATLEAVEKERCTALYGVPTMF--IAELNLPDFGSFDLTSLRTGIMAG 313
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
P E+MK A++ YGMTETS ++ T D LE
Sbjct: 314 SPCPVEVMKRVVAEMHMAEVSICYGMTETSP-VSCQTRADDDLE---------------- 356
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVST 410
H+ VG+ PH+E+KV S G + TRG VML YW+ V
Sbjct: 357 -HRTG--TVGRVLPHLEVKVVDPVSGVTVPRGTQGELCTRGYSVMLGYWEDPERTAEVVD 413
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD+ + + G V + GR I GGEN+YP E+E L HP I + VVG+
Sbjct: 414 PGRWMHTGDLALMREDGYVEIAGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVVGVP 473
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLF 529
+AR E V+ACV R+ D + ++ +R CR++ L +K P R+
Sbjct: 474 DARYGESVLACVIPRDP-------ADAPTLDE--------IRAFCRDR-LASYKIPSRVE 517
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
VL FP+T +GK+R+ E+R
Sbjct: 518 VL--GTFPMTVSGKVRKIELR 536
>gi|398846412|ref|ZP_10603391.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398252595|gb|EJN37773.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 532
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 230/526 (43%), Gaps = 60/526 (11%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI---GGIVAPLNYRWSFKEA 96
+ L + RGL+ +G++ GD V + A NS EWILA I G ++ P+N R EA
Sbjct: 46 EQALQVTRGLMALGIQPGDRVGLWAPNSR---EWILAALGIHCAGAVLVPINTRMKGAEA 102
Query: 97 SRAIT-SIRPVMLVTDESSDSWYLELQHTAIP-SLRWHVSLGSSSSDFVNKRDMLTADIL 154
+ + S V+ V D Y L P +L V S + RD+ A L
Sbjct: 103 ADVLARSGCRVLFVQQRFLDVDYPALLAPQRPATLEHQVVFACDQS--LPARDLSYAQFL 160
Query: 155 KGYS----LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 210
G + L + PE + FTSGTTG PKGV+ +H + + ++G G
Sbjct: 161 AGAATIEKLTAERRALCIPPEAVCDLLFTSGTTGKPKGVMSAHGQNLRAFTEYVRVLGLG 220
Query: 211 EDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI 269
D YL P H G + + L+ GA + F+++ E + + VT L P +
Sbjct: 221 PGDRYLIVNPFFHAFGYKAGWLTCLIAGATILPHAVFDAELVFERIARERVTVLPGAPTL 280
Query: 270 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 329
L R+ +T S++ + G +P L++ + + + +AYG+TE
Sbjct: 281 YLSLLAHPRLAET--DLSSLRVAVTGSASIPPSLIERMRSELGFSVVTTAYGLTECGG-- 336
Query: 330 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV-----CSDGSSHV 384
TL DP QA V + G+P P E+ + S
Sbjct: 337 -LATLCDP---------QASAEVIAGTS--------GQPLPGTEVSIRGPDNASLAQGQT 378
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 444
G I RG H+M Y+ A E WL TGD+G +D GN+ + R GG
Sbjct: 379 GEICLRGFHIMQGYFQDPAATAEAIDAEGWLHTGDVGCLDPAGNLVITDRLKDMYIVGGF 438
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 504
N YP E+EA LL HP I + VVGIA+AR+ E+ ACV LR+ Q E +EL
Sbjct: 439 NCYPAEIEAALLGHPAIAQVAVVGIADARMGEVGCACVVLRQGQQLGE---------QEL 489
Query: 505 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ S RE+ + +K PR V + PL + K+ ++++R
Sbjct: 490 IGWS-------RER-MANYKVPRQ-VRFFSALPLNPSNKVAKNDLR 526
>gi|297191141|ref|ZP_06908539.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197723338|gb|EDY67246.1| acyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 535
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 243/557 (43%), Gaps = 67/557 (12%)
Query: 13 LSRIAAVK--RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L+R AA R ++V + T + V LARGLL G+ GD V I A+N
Sbjct: 23 LARTAAAHPGREALVDVAAGARWTYAELDAAVDLLARGLLGSGVGKGDRVGIWAVNCA-- 80
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSD-SWYLELQH 123
EW+L A A IG I+ +N + E + +LV T ++SD ++
Sbjct: 81 -EWVLVQYATARIGAIMVNINPAYRAHELEYVLNQAGVSLLVASQTHKTSDYRAMVDAVR 139
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P LR + SS D + + A + LR S + V I +TSGTT
Sbjct: 140 PKCPQLRAVHYIADSSWDVL----LEAATGVTDEQLRDTQAQLSC--DDPVNIQYTSGTT 193
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ ++ Y E D P H G+ +A GAC V
Sbjct: 194 GFPKGATLSHHNILNNGYFVGEMIAYTEQDRVCIPVPFYHCFGMVMGNLAATSHGACMVI 253
Query: 243 -IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
P F+ + L AV+Q TSL VP + +A L +++ + G P
Sbjct: 254 PAPSFDPAATLRAVQQERCTSLYGVPTMF--IAELNLPGFASYDLSTLRTGIMAGSPCPV 311
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK A++ YGMTETS ++ T D LE +
Sbjct: 312 EVMKRVVAEMNMAEVSICYGMTETSP-VSTQTRRDDDLER-------------------R 351
Query: 362 GVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQ-FLAKPSVSTGEVW 414
VG+ PH+E+K+ S G + TRG VML YWD+ SV G W
Sbjct: 352 TGTVGRVMPHIEVKIVDPVSGVTLPRGEAGELCTRGYSVMLGYWDEPEKTAESVDAGR-W 410
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+ + + G V +VGR I GGENVYP E+E L HP I + VVG+ + R
Sbjct: 411 MHTGDLAVMREDGYVQIVGRIKDMIIRGGENVYPREIEEFLYAHPKIADVQVVGVPDERY 470
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E ++ACV R+ + E + + CRE+ L +K PR +
Sbjct: 471 GEEILACVIPRDPADAP---------------TLEEITEFCREQ-LAHYKIPRRLEVLAD 514
Query: 535 PFPLTSTGKIRRDEVRR 551
FP+T +GK+R+ E+RR
Sbjct: 515 -FPMTVSGKVRKVELRR 530
>gi|410456905|ref|ZP_11310753.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409926992|gb|EKN64141.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 516
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 242/536 (45%), Gaps = 63/536 (11%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +++ D+ + +++GL+ GD VA S ++ +A A +G I+ PL+ R++
Sbjct: 30 TWKEYHDDINRMTNSFIKLGLKKGDKVATVLPQSPAFMNVFMAAANMGLILVPLDPRFTS 89
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQH----TAIPSLRWHVSLGSSSSDFVNKRDML 149
E + P +LV+ + +S +++ IP HV S +F N++
Sbjct: 90 SEMANLCNRTNPKLLVSLANQESIVNTVENLLKLVDIP----HVY--SYQGNFPNRQAKP 143
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY 209
+L S H + + +II FTSG+TG PKG +ISH + + +
Sbjct: 144 YETLLDSSSEEISKERHP-SLDDPLIIIFTSGSTGVPKGALISHRNTFAMAEKTVQTWKF 202
Query: 210 GEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA 268
+DD L P H+GG +A+ L VG V P F L + ++ +T + VP
Sbjct: 203 TDDDKILINLPTSHVGGTHDMLAVQLYVGMTGVLSPSFNPSETLRYISKYQITFMGGVPT 262
Query: 269 IMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
+ LI + T D S++ + GG +L+ NSFP A +++++GMTETS
Sbjct: 263 MFR----LIFQQCTIADYDVNSLRLVFLGGEPSSPQLIHRIKNSFPNASVVASWGMTETS 318
Query: 327 SSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS---- 381
TF + D N V Q +G KP P +KV DG+
Sbjct: 319 GYFTFSGIEDEV----------------NLVAQTEG----KPGPENLMKVMRPDGTRADT 358
Query: 382 SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKS 441
+ VG + RG V+ Y D+ + G WL TGD+G +D+ + VGR+ S
Sbjct: 359 NEVGELYVRGDSVISSYLDKEHNLDAFVDG--WLKTGDLGYLDENHYLHFVGRQKEMFIS 416
Query: 442 GGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKN 501
GG NVYP EVE+ L +PGI ++ +A+ E+ VA + +
Sbjct: 417 GGYNVYPLEVESYLNSYPGINASCLIEVADDIWGEVGVAFIVPEDGAA------------ 464
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
L+ E + HCR+ L +K P+ F + R P T GKI + E+R+ + + +
Sbjct: 465 ----LNVEEIVNHCRQ-GLANYKIPKKFFI-RTNLPKTLVGKIAKQEIRKSLETFM 514
>gi|261419843|ref|YP_003253525.1| AMP-binding protein [Geobacillus sp. Y412MC61]
gi|297530199|ref|YP_003671474.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|319766657|ref|YP_004132158.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261376300|gb|ACX79043.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|297253451|gb|ADI26897.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|317111523|gb|ADU94015.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 544
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 150/562 (26%), Positives = 243/562 (43%), Gaps = 80/562 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV T +QF +ARGL+ +G+ G+ VAI A N ++ A +
Sbjct: 20 REAVVYADRGLRLTYRQFNDYCRLVARGLMRLGIEKGEHVAIWATNVPEWIACQFATGKM 79
Query: 81 GGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E + S + + ++ DS Y+++ + +P LR S+
Sbjct: 80 GAVLVTVNTNYRAAELEYLLRQSDSTTLFLIEQYRDSSYIDILYEIVPELR-----TSAP 134
Query: 140 SDFVNKR-DMLTADILKGYSLRSLPFT--------------------HSWAPEGAVIICF 178
+KR L I G FT S P + + +
Sbjct: 135 GQLQSKRLPKLKNVIFLGDKRHPGMFTWNDILAMAHDVSEEELDERMESLDPHDVINMQY 194
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVG 237
TSGTTG PKGV+++H ++ + +G GE D P H G + S +A + VG
Sbjct: 195 TSGTTGFPKGVMLTHYNIVNNAHQVAQCMGLGEGDRLCIPVPFFHCFGCVMSTLACVTVG 254
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
A V + +F K LE VE T+L VP + +A L S++ + G
Sbjct: 255 ATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKYDLSSLRTGIMAGS 312
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP---TLETPGQLPQAFGNVTP 354
P E+MK + AYG TE S +T DP +ET
Sbjct: 313 PCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDPLELRVET------------- 359
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSV 408
VG+ P VE+K+ G++ G + TRG HVM Y++ A
Sbjct: 360 ----------VGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGYYNNPEATNEA 409
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I+ + VVG
Sbjct: 410 IDADGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVG 469
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + E V+A + L++ ++E +R+ CR N++ K PR
Sbjct: 470 VPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-GNISRHKIPR- 511
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
++ + +P+T++GKI++ ++R
Sbjct: 512 YIEFTDSYPMTASGKIQKFKLR 533
>gi|221213085|ref|ZP_03586061.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
gi|221167298|gb|EED99768.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
Length = 564
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 162/577 (28%), Positives = 254/577 (44%), Gaps = 73/577 (12%)
Query: 9 ICQCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I +C A R +VV+ + +Q ++V LA LL +GLR+G+ V I + N
Sbjct: 22 IGRCFEETVARFPDREAVVSCHQGLRYSYRQLDREVGRLASALLRLGLRTGERVGIWSHN 81
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE----- 120
+ +L LA A IG ++ +N + E A+ + ML+T S + Y+E
Sbjct: 82 NMEWLLIQLATARIGIVLVNINPAYRASELDYALNKVGCRMLITMTSFKTTEYIEIVREL 141
Query: 121 -----------LQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSW 168
L +P LRW V LG+ + + +++ ++R+ S
Sbjct: 142 APGLAHAVPGALDAPRLPQLRWLVHLGNEPIAGVMCFSELMALGDPDDPAVRAA--GESL 199
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
+ I FTSGTTG PKG +SH ++ + + E D PL H G+
Sbjct: 200 KATDPINIQFTSGTTGFPKGATLSHRNILNNGFFVGEAMRFTERDRLCVPVPLYHCFGMV 259
Query: 229 SAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+ + P F+ S L AV+ T+L VP + +A L +
Sbjct: 260 MGNLNCLAHGATIVYPGESFDPVSVLTAVQDERCTALYGVPTMF--IAMLSHPRFAEFDL 317
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
+S++ G P E+MK + ++ AYGMTETS T++TP L
Sbjct: 318 NSLRTGCMAGSPCPIEVMKRVVDDMHMKEVTIAYGMTETSPVSC-----QSTVDTP--LE 370
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYW- 399
+ G V G+ PH+E+K+ + G + TRG VM YW
Sbjct: 371 RRVGTV-------------GQVHPHLEIKLVDPDTGRTVDIGETGELCTRGYSVMNGYWN 417
Query: 400 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 459
D+ + ++ E W+ TGD+ ++D G V +VGR + GGENVYP E+E L HP
Sbjct: 418 DEKRTREAIDEDE-WMHTGDLATMDAKGYVNIVGRIKDMVIRGGENVYPREIEEFLYGHP 476
Query: 460 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 519
I + VVG+ + + E + A V LR + L+ E LR HC+ +
Sbjct: 477 AIRDVQVVGVPDPKYGEELCAWVVLR----------------PDHTLTEEELRAHCKGQ- 519
Query: 520 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
+ +K PR +V + FP+T TGKI++ + RE+M H
Sbjct: 520 IAHYKVPR-YVRFVDEFPMTITGKIQKYRI-REIMQH 554
>gi|111023082|ref|YP_706054.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110822612|gb|ABG97896.1| probable long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 530
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 239/520 (45%), Gaps = 67/520 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA L G+ GD V + LN + E +LA+ +G I P+N+R + E + I
Sbjct: 55 LAGALSRRGVNFGDRVLLLTLNRTEFFEAVLAINALGAIAVPVNFRLTPPEVA-FIARDS 113
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
V E + + + +P L V++G+ + V + L ++ ++ LP
Sbjct: 114 GARAVFTEPALAPLVAAVRQDVPGLSLVVNIGADTEADVLGYEELVSEDGPAHAPVDLP- 172
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCH 223
+ +I +TSGTTG+PKG V+SHS ++ QS+ I + Y DD+ +P+ H
Sbjct: 173 -----EDTPSLILYTSGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFH 227
Query: 224 IGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLI 277
+ L S MLM+G V P F L+ EQ +T++ VP A+ AD
Sbjct: 228 VAALGSVAPMLMLGGTTVIHPLKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD----- 282
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
T +GRD ++++ G S+ +++ ++FP+A +++ +G TE S +T + D
Sbjct: 283 ---PTVRGRDLALRVISWGAAPASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGD 338
Query: 337 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRG 391
+ G VGKP P ++ +V D + V G I+ RG
Sbjct: 339 DAIRKLG--------------------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRG 378
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
+ML YW A G W +GD+ DD G V++V R+ I SGGEN+Y EV
Sbjct: 379 PTMMLEYWQNPAATADAFAGG-WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEV 437
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL HP I VVG + + TE+ VA V L D+ S L+ E L
Sbjct: 438 ENVLFGHPRIREAAVVGRPDPKWTEVPVAVVALD----------DEGSD-----LTVEEL 482
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K L +K P+ V+ P ++GK+ + E+R+
Sbjct: 483 AAWLDDK-LARYKHPKDVVI-VDALPRNASGKVVKGELRK 520
>gi|113970620|ref|YP_734413.1| AMP-binding domain protein [Shewanella sp. MR-4]
gi|113885304|gb|ABI39356.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-4]
Length = 570
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 243/548 (44%), Gaps = 68/548 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFK 94
+Q++ + LA GLL++G+ GD V I S N EW L A A IG I+ +N + +
Sbjct: 59 RQYLAQIDALATGLLKLGIGPGDRVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYRPE 117
Query: 95 EASRAITSI--RPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E A+T++ R V + D+ S YL+ LQ A+P L++ + +G
Sbjct: 118 ELQYALTNVGCRAV-ICADKFKSSNYLQMLYELAPELKVCAAGQLQAKALPELQFVIRMG 176
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ S + D L ++ S +P A+ I FTSGTTGSPKG +SH +
Sbjct: 177 AEQSPGMLNFDDLLLEVTPDDKAALEQIAESLSPYDAINIQFTSGTTGSPKGATLSHHNI 236
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSALEA 254
+ + + +D PL H G+ + L GA VF F+ + LE
Sbjct: 237 LNNGYLVAEAMKFTCEDKLCIPVPLYHCFGMVLGNLVCLAKGAAAVFPGDSFDPLTTLEV 296
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
VE+ T+L VP + +A L + S++ + G P E+M+ N
Sbjct: 297 VERERCTALHGVPTMF--IAELEHPEFKRFDLSSLRTGVMAGATCPEEVMRRVQNLMYMQ 354
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+++ YG TE S L +T D +E + + VG+ PH E+
Sbjct: 355 EVLIGYGQTE-CSPLNHITEIDSPVEK-------------------RVLTVGRALPHTEV 394
Query: 375 KVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
K+ + + G + +RG +M YW+ + E WL +GDIG +D+ G V
Sbjct: 395 KIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSEGWLHSGDIGQMDEQGYV 454
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E L H + V G+ + + E V A +++R
Sbjct: 455 QIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKIRSGAT 514
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
SE E +R EK FK PR ++ + + +P+T TGKI++ ++
Sbjct: 515 ISE----------------EDIRHFLTEK-FAYFKVPR-YIKFVEQYPMTVTGKIQKFKM 556
Query: 550 RREVMSHL 557
R + L
Sbjct: 557 RELMYQEL 564
>gi|389819498|ref|ZP_10209366.1| long-chain-fatty-acid--CoA ligase [Planococcus antarcticus DSM
14505]
gi|388463296|gb|EIM05660.1| long-chain-fatty-acid--CoA ligase [Planococcus antarcticus DSM
14505]
Length = 563
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 153/565 (27%), Positives = 257/565 (45%), Gaps = 91/565 (16%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++ Q + A L ++G++ GD V+I N + + + GG+V N ++ +E
Sbjct: 52 EELYQSSMKFANYLQKLGIKKGDRVSIMLPNCPQAVISFYGILYAGGVVVMTNPLYTERE 111
Query: 96 AS--------RAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSS-SSDFVNKR 146
S RAI ++ +L S +L++ + ++ +++ + F+ K+
Sbjct: 112 ISYQMKDSGARAIIALD--ILFPRISKVIKETDLENVIVTGIKDYLAFPKNLVYPFIQKK 169
Query: 147 -------------DMLTADILKGY--SLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ L +I+K ++ PF E ++ +T GTTGSPKGV++
Sbjct: 170 QYGMTVKVEHRGINHLFTEIMKSAQPTIVETPFNFE---EDLALLQYTGGTTGSPKGVML 226
Query: 192 SHSALIVQSL---AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFE 247
+H +I + + + GE+ + + PL H+ GL++ + + +M+G V +PKF+
Sbjct: 227 THKNIISNATMCDSWLYKCKKGEETI-MGIIPLFHVYGLTTVLILSVMLGNKMVLLPKFD 285
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
++AL+ + + T P + L + K S++ L+G LP+E+ +E
Sbjct: 286 PETALKTINKQKPTLFPGAPTLYIGLMNHPNIAKY--DLSSIEACLSGSAPLPAEV-QEK 342
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
KL+ YG+TETS +T L +G T S+ G
Sbjct: 343 FEELTGGKLVEGYGLTETSP-VTHSNL-------------VWGERTKGSI--------GL 380
Query: 368 PAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
P P + K+ G+ +G I +G VM YW KP + + WL TG
Sbjct: 381 PYPDTDCKIFQTGTMDTVPNGEIGEIAVKGPQVMKGYW----KKPEETAATIVDGWLLTG 436
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G +DD G+ ++V R+ I +GG N+YP E+E VL +H I VV GI + E V
Sbjct: 437 DLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYEHEAIQECVVAGIPDPYRGETV 496
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A + L+E + +E E L HCRE+ L FK PR++ +RK P
Sbjct: 497 KAYIVLKEGYTVTE----------------EELNTHCREQ-LASFKVPRIYE-FRKELPK 538
Query: 539 TSTGKI-RRDEVRREVMSHLKSLPS 562
T+ GKI RR V EV K++PS
Sbjct: 539 TAVGKILRRSLVDEEVAKQSKAVPS 563
>gi|21224520|ref|NP_630299.1| AMP-binding domain-containing protein [Streptomyces coelicolor
A3(2)]
gi|4455741|emb|CAB36604.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces coelicolor
A3(2)]
Length = 541
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 237/546 (43%), Gaps = 65/546 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R T +F V LARGLL G+ GD V I A+N EW+L A
Sbjct: 38 REALVDVPSGRRWTYAEFGAAVDELARGLLAKGVTRGDRVGIWAVNCP---EWVLVQYAT 94
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHV 133
A IG I+ +N + E + +LV +SSD +E P+LR V
Sbjct: 95 ARIGVIMVNVNPAYRAHELEYVLQQSGISLLVASLAHKSSDYRAIVEQVRGRCPALRETV 154
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G S D LTA R + + V I +TSGTTG PKG +SH
Sbjct: 155 YIGDPSWD------ALTAGAAAVEQDRVDALAAELSCDDPVNIQYTSGTTGFPKGATLSH 208
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ VGY E D P H G+ + GAC V P E +
Sbjct: 209 HNILNNGYWVGRTVGYTEQDRVCLPVPFYHCFGMVMGNLGATSHGACIVIPAPSSEPAAT 268
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 269 LEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVEVMKRVVAEM 326
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS ++ T D LE H+ VG+ PH
Sbjct: 327 HMEQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG--TVGRVLPH 366
Query: 372 VELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV + G + TRG VML YW++ W+ TGD+ + +
Sbjct: 367 IEVKVVDPVTGVTLPRGEAGELRTRGYSVMLGYWEEPGKTAEAIDPGRWMHTGDLAVMRE 426
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V +VGR I GGEN+YP EVE L HP I + VVG+ + R E V+ACV +R
Sbjct: 427 DGYVEIVGRIKDMIIRGGENIYPREVEEFLYAHPKIADVQVVGVPHERYGEEVLACVVVR 486
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGKI 544
++ L+ E LR +C L +K P RL +L FP+T +GK+
Sbjct: 487 DAAD---------------PLTLEELRAYC-AGQLAHYKVPSRLQLL--DSFPMTVSGKV 528
Query: 545 RRDEVR 550
R+ E+R
Sbjct: 529 RKVELR 534
>gi|410458806|ref|ZP_11312563.1| long-chain acyl-CoA synthetase [Bacillus azotoformans LMG 9581]
gi|409931156|gb|EKN68144.1| long-chain acyl-CoA synthetase [Bacillus azotoformans LMG 9581]
Length = 537
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/566 (25%), Positives = 245/566 (43%), Gaps = 59/566 (10%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
M + S + Q L+ A+ + V + G T ++ ++ LA GL +G+ GD V
Sbjct: 17 MKSQSNLSVNQLLNAAASSHPDKEVIVDGKVRMTYKELEKEANLLASGLSMLGIGEGDRV 76
Query: 61 AISALNSEWY--LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWY 118
A N WY + A+A IG I+ P NYR EA + + L E D
Sbjct: 77 AAGLPN--WYEIVVIYFALAKIGAILVPFNYRLRMAEAEYILRNSGAKALFLPEEFDRLN 134
Query: 119 LELQHTAIP----SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV 174
Q I SL + +S+ + ++ + +L + + + +
Sbjct: 135 QYEQFINIKNHLSSLEYLLSVRFEKENTISYQKLLEMGMQE-----EIDEIEIDSDNDIY 189
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML 234
I +TSGTTG PKG +++H ++ ++ + +DV+L + PL H+ G++ ++
Sbjct: 190 TILYTSGTTGKPKGAMLTHKNIVQTAVVTADWMQCSSEDVFLMSMPLYHVMGINFLFRVI 249
Query: 235 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
+ A + + K++ + AL +E VT VP + + L + S++
Sbjct: 250 VSNASLILMDKYKPERALSLIETEKVTVHPGVPTMF--ILELNHPMFSSFDLSSLRTGEI 307
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
GG P E++ ++ YG+TETS +LT D
Sbjct: 308 GGSSCPIEIVHRIRTEM-NCNILVGYGLTETSPTLTLTDFEDD----------------- 349
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVS 409
+ VGKP P VE+K+ D G VG ++ R VM Y+
Sbjct: 350 ---DTIRSETVGKPLPGVEIKIVDDFGNEIGKDKVGELVCRSFGVMKGYYAMHEKTREAI 406
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
G+ W TGD+ ID+ G + ++GR+ IK G +YP+E+E + L HP + ++G+
Sbjct: 407 DGDGWFYTGDLAIIDEEGYIRIIGRKQEVIKKAGFKIYPQEIEEIFLTHPNVAEAAMIGM 466
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
++ + E+ AC+RLR + SE KNK L +K P
Sbjct: 467 PDSEVGEISYACLRLRRGSKNSEEELKDFIKNK-----------------LADYKVPDK- 508
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMS 555
+++ + FP T+TGKIR+ +++ ++ S
Sbjct: 509 IIFMEHFPRTATGKIRKIDLQCQIKS 534
>gi|418422601|ref|ZP_12995772.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
gi|363993674|gb|EHM14896.1| AMP-binding domain protein [Mycobacterium abscessus subsp. bolletii
BD]
Length = 544
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 251/550 (45%), Gaps = 65/550 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
++++ ++G+R T ++ D+ +ARGL+ +G+ +GD V I A N EW+L A A
Sbjct: 33 DALIDVSGDRRWTYRELDADINRVARGLMSLGVAAGDRVGIWAPNCA---EWVLVQYAAA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTD-ESSDSWYLELQ-HTAIPSLRWHVS 134
IG I+ +N + E + A+ + +R ++ T +SSD + Q P LR V
Sbjct: 90 KIGAILVNINPAYRTHELAYALNQSGVRTLICATAFKSSDYVAMARQVRPDAPGLRDVVF 149
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G+S ++ V + +T +L+ + L T + I +TSGTTG PKG +SH
Sbjct: 150 IGTSDWTELVAGAERVTEAVLRA-RMSQLSNTDP------INIQYTSGTTGYPKGATLSH 202
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ + D P H G+ + GA V P F+
Sbjct: 203 RNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDPGRT 262
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEA+E+ + VP + +A L + +++ + G P E+MK +
Sbjct: 263 LEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEVMKRCIDEM 320
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A + AYGMTETS ++ TL+D LE + VG+ PH
Sbjct: 321 HMAGVAIAYGMTETSP-VSCQTLFDDDLER-------------------RTATVGRAHPH 360
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ S G + TRG VML YW+ V + W+ TGD+ + +
Sbjct: 361 IEVKIVDPDSGETVQRGQPGELCTRGYSVMLGYWNDEEHTQEVLDADGWMHTGDLAVMRE 420
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G ++GR + GGENVYP E+E LL HP I + VVG+ + + E + A VR+
Sbjct: 421 DGYCTIIGRLKDMVIRGGENVYPREIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRM- 479
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
K +++ + +R + L +K PR +V + FP+T TGK+R
Sbjct: 480 --------------KADRVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFPMTVTGKVR 523
Query: 546 RDEVRREVMS 555
+ E+R++ +
Sbjct: 524 KIEMRQQTIQ 533
>gi|397735239|ref|ZP_10501938.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
gi|396928780|gb|EJI95990.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
Length = 511
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 151/546 (27%), Positives = 233/546 (42%), Gaps = 56/546 (10%)
Query: 15 RIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
RI +N + G R T ++ LA GL +G+ GD V N LE +
Sbjct: 13 RITMTPKNEALVFDG-RAVTYEEMALRTRRLAHGLRALGVEKGDCVGFFGFNDPAALEVM 71
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS 134
A +G PLN R + +EA + R ++ + EL + P W +
Sbjct: 72 FAAGLLGATYLPLNARLTAEEARFVLGDSRCTTVIFGDLQADVAQELAQSDTPVTTW-IG 130
Query: 135 LGSSSSDFVN---KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
LG S S + I + L L ++ ++SGTTG+PKGV++
Sbjct: 131 LGGSWSTHTYEGVRAGQPDTRIDEQVGLDDLS-----------VLMYSSGTTGAPKGVML 179
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFIPKFESKS 250
SH ++ +L ++ + L APL HIGG+ A+ L+ G V + KF++
Sbjct: 180 SHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPTLLNGGTVVLLRKFDAGV 239
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+ +E+ +T+ VP ++ +L R S++ I G LP L+ +
Sbjct: 240 VLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAICVAGAPLPEALISPWQDR 297
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ AYG+TET+ S+T ++ D + + F T V +P G
Sbjct: 298 --DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FTDVDVVRPDG-------- 345
Query: 371 HVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
S + +G I+ +G +VML Y +Q A + WL TGD G DD G ++
Sbjct: 346 ------SSAEPNEIGEIVAKGPNVMLGYLNQPEATARTIV-DGWLHTGDAGYFDDEGFLF 398
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ R SGGENVYP EVEA LL+ GI V+G+ + + W
Sbjct: 399 ICDRYKDMYISGGENVYPAEVEAALLKLDGIREAAVIGVPHEK----------------W 442
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E+ L E +R REK L GFK P F+ + P T+TGKIR+ ++R
Sbjct: 443 GETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIAEALPRTATGKIRKPDLR 500
Query: 551 REVMSH 556
+ S
Sbjct: 501 KLAASQ 506
>gi|118353816|ref|XP_001010173.1| AMP-binding enzyme family protein [Tetrahymena thermophila]
gi|89291940|gb|EAR89928.1| AMP-binding enzyme family protein [Tetrahymena thermophila SB210]
Length = 580
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 254/569 (44%), Gaps = 72/569 (12%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIG 81
++++ N+ T Q++ +++ A GLL +GL+ GD + I S N EW + A +
Sbjct: 45 ALISHEQNKIFTYQEYFKEIQKFAAGLLNMGLKKGDRIGIYSPNNYEWCITQ-FAASMAD 103
Query: 82 GIVAPLNYRWSFKEASRAITSI--------------RPVMLVTD---ESSDSWYLELQHT 124
I+ +N + E + + + + D E S + L+
Sbjct: 104 LILVNINPAYQEHELEYCLNKVGCKALVLASHHKKSNYIQFINDLAPELKTSKFGSLKSQ 163
Query: 125 AIPSLRWHVSLGSS-SSDFVNKRDMLTADILKGYSLRSLPFTHSWA-PEGAVIICFTSGT 182
+PSL++ + + + +N +D+L LK + ++L + A P+ A I FTSGT
Sbjct: 164 RLPSLKYLIRIDDEVTPGMINYKDVLQMGGLKDF--KTLDRIMNIASPDDATNIQFTSGT 221
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TG PKG ++H ++ S +GY E DV PL H G+ + V
Sbjct: 222 TGLPKGATLTHFNILNNSFFIGNRLGYSEKDVICVPVPLYHCFGMVLGNLCAINFGSTVV 281
Query: 243 IPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+P F +K A+E+V ++ TS+ VP + + + ++KK + G P
Sbjct: 282 MPSEGFSAKKAMESVTKYKCTSIYGVPTMFLEYVKEYESNPSIYNYSTLKKGVMSGALCP 341
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
LM + + + + YG TE S + F T + +LE
Sbjct: 342 QALMSKLISEWDVPNIQICYGQTEVSP-IIFQTNQNDSLED------------------- 381
Query: 361 QGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+ VG PH E+K+ + V G I RG VM +YW A + W+
Sbjct: 382 KCTTVGTIFPHSEVKIINKKGHIVPIGESGEICIRGFGVMEKYWADRKATSKTIDQDQWI 441
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G ID+ G + +VGR I GGEN+YP+E+E L H I + V+G+ + +
Sbjct: 442 KTGDMGIIDERGYMKIVGRLKEMIIRGGENIYPKEIEEYLRSHRSIQDVQVLGVPDEKFG 501
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E A ++L++ DQ + K++ ++C+ + + +K P+ +V +
Sbjct: 502 EETFALIKLKQ---------DQVLEGKDIF-------EYCKGQ-IAHYKVPK-YVKFVNE 543
Query: 536 FPLTSTGKIRR----DEVRREVMSHLKSL 560
FPLT TGK ++ DE+++E+ + K+
Sbjct: 544 FPLTVTGKPQKFKMLDELKKELQQNPKAF 572
>gi|339501874|ref|YP_004689294.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
gi|338755867|gb|AEI92331.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
Length = 565
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 239/550 (43%), Gaps = 68/550 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T + FV++V LA GLL +G+ GD V I A N +EW L A A IG I+ +N +
Sbjct: 55 TYRDFVREVDRLAAGLLTLGIEKGDRVGIWAPNCAEWLLTQ-FATARIGAILVCINPAYR 113
Query: 93 FKEASRAITSI---RPVMLVTDESSDSWYL--------------ELQHTAIPSLRWHVSL 135
E A+ + VM +SSD + + Q +P LR +
Sbjct: 114 LSELEYALNKVGCSALVMAPRHKSSDYVAMLTELMPELANATPGQCQAARVPKLRHVIVT 173
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLP-FTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
G + + D + A + +L ++ +P+ A+ I FTSGTTGSPKG ++H
Sbjct: 174 GDAPPEGTIGFDAICA-AGSAVPVETLDRISNDLSPQDAINIQFTSGTTGSPKGACLTHH 232
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSAL 252
++ + + + E+D P H G+ + + IP F++++ L
Sbjct: 233 NIVNNAHFVTQTMQFTEEDRLCIPVPFYHCFGMVMGTLGCVSKGATMVIPGEGFDARATL 292
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
EAV Q T+L VP + + L S++ + G P E+M++
Sbjct: 293 EAVTQEKCTALYGVPTMFVNALELADFDTF--DLSSLRTGIMAGAPCPIEVMRQVQARMH 350
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+ AYGMTETS ++F + D LE + VG+ PHV
Sbjct: 351 MQGVTIAYGMTETSP-VSFQSNMDDPLEK-------------------RVSSVGRIHPHV 390
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
E+K+ D + V G +LTRG VM YW+ + + W+ TGD+ +D G
Sbjct: 391 EVKIVDDTGNTVKTGEQGELLTRGYSVMQGYWEDDAQTAASIDAQGWMHTGDLARLDADG 450
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ GR I GGEN+YP E+E L HP I+ V GI + +L E V A + R
Sbjct: 451 FCTITGRLKDMILRGGENIYPREIEEFLYTHPDILQAQVFGIPDNKLGEAVCAWIVARAG 510
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+E++ ++ CR + FK P +V ++ P+T TGK ++
Sbjct: 511 SDLAETD----------------VQDFCRSA-IAHFKVP-AYVSFKDELPMTVTGKPQKF 552
Query: 548 EVRREVMSHL 557
+R ++ L
Sbjct: 553 VMRDRMIKEL 562
>gi|304309908|ref|YP_003809506.1| AMP-binding protein [gamma proteobacterium HdN1]
gi|301795641|emb|CBL43840.1| AMP-binding family protein [gamma proteobacterium HdN1]
Length = 574
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 164/577 (28%), Positives = 249/577 (43%), Gaps = 69/577 (11%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I C RIA R++++ N T +++ + V LA GLL++G++ GD V I A N
Sbjct: 28 IGNCFDRIANTYPDRDALIVRHQNIRWTFREYQKQVNALATGLLKLGIQPGDRVGIWAPN 87
Query: 67 S-EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE---- 120
EW L A A IG I+ +N + E A+ + ++T E S YL+
Sbjct: 88 RVEWCLTQ-FATAKIGAIMVCINPAYRLYELEYALNKVECKAIITAEKFKTSEYLKMLND 146
Query: 121 ------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI-LKGYSLRSLPFTHS 167
L +P ++ + +GS S + D + A + Y L +
Sbjct: 147 LAPELARCEPGKLDAHKLPHMKSVIRMGSEKSPGMFNFDEVCASAGEREYQLLA-DIAAL 205
Query: 168 WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 227
P+ A+ I FTSGTTG+PKG ++H ++ + + E D PL H G+
Sbjct: 206 LQPDDAINIQFTSGTTGNPKGATLTHHNILNNGYQVAQGMNFTEQDRLCIPVPLYHCFGM 265
Query: 228 SSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKG 285
+A L GA +F + F+ S LE V+ T+L VP + +A L
Sbjct: 266 VMGNLACLTHGAAAIFPAEAFDPISVLETVQAEKCTALHGVPTMF--IAELQHPDINKYE 323
Query: 286 RDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 345
S++ + G P E+MK+ + YG TETS + MT D LE
Sbjct: 324 LSSLRTGVMAGSPCPMEVMKQVIAKMNMRDVTIMYGQTETSP-VNHMTAIDSPLEK---- 378
Query: 346 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD 400
+ VG+ +PH+E+K+ V G + RG VM YW
Sbjct: 379 ---------------RVSTVGRVSPHLEVKIVDTAGRVVPIGETGELCCRGYSVMQGYWG 423
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
WL +GD+ +D G V +VGR I GGENVYP EVE L H
Sbjct: 424 DREKTADTIDLANWLHSGDLAVMDAEGYVKVVGRIKDMIIRGGENVYPREVEEFLYTHEA 483
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
I + V GI + + E VVA ++LRE + ++ E +R +C++K +
Sbjct: 484 IQDVQVFGIPHEKYGEEVVAWIQLREGFGH---------------VTPENIRDYCKDK-I 527
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
T FK PR+ + FP T TGK+++ +R + L
Sbjct: 528 THFKIPRVIRIVNS-FPTTVTGKVQKFRMREMMEEEL 563
>gi|300783387|ref|YP_003763678.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384146618|ref|YP_005529434.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399535272|ref|YP_006547934.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299792901|gb|ADJ43276.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340524772|gb|AEK39977.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398316042|gb|AFO74989.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 548
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 159/546 (29%), Positives = 247/546 (45%), Gaps = 58/546 (10%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R ++V + +R T Q DV LA GLL+ G+ GD V I A N +EW L A A
Sbjct: 32 DREALVEVPTDRRWTYAQLRDDVDALALGLLKTGVVKGDRVGIWAPNMAEWTL-LQYATA 90
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHVS 134
IG I+ +N + E + +LV+ ++SD + +E P LR V
Sbjct: 91 KIGAILVNINPSYRTHELEYVLKQAGISVLVSARAFKTSDYAGMIEEVRGNCPELRSVVL 150
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+GS + D ++L A G + R + +P+ + I +TSGTTG PKG +SH
Sbjct: 151 IGSGAWD-----ELLAAGRC-GDAARLAAAQAALSPDDPINIQYTSGTTGFPKGATLSHH 204
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSAL 252
++ A+ GY D P H G+ + IP F+ ++ L
Sbjct: 205 NILNNGYFVGALCGYTPADRVCIPVPFYHCFGMVMGNLACTSHGATMVIPAQGFDPEATL 264
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
EAV++ TSL VP ++ +A L K S++ + G P E+MK+ +
Sbjct: 265 EAVQRERCTSLYGVPTMLF-IAELNHPKFAAYDLSSLRTGIMAGSPCPVEVMKQVVSRMG 323
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
++ YGMTETS ++ T D +L+ + VG+ PH+
Sbjct: 324 MEQVTICYGMTETSP-VSTQTRMDDSLDL-------------------RVSTVGRVHPHL 363
Query: 373 ELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + G + TRG VML YW+ W+ TGD+ +D
Sbjct: 364 EIKLVDPATGLTVPRGEAGELCTRGYSVMLGYWNDPGKTAEAIDAARWMHTGDLAVMDAD 423
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E + A V+LR
Sbjct: 424 GYVNITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDVKYGEELCAWVKLR- 482
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
D +++ +++E LR K L +K PR +VL FP+T TGK+R+
Sbjct: 483 ---------DHAAE-----VTAETLRAFATGK-LAHYKIPR-YVLVVDEFPMTVTGKVRK 526
Query: 547 DEVRRE 552
E+R +
Sbjct: 527 IEMREK 532
>gi|119505624|ref|ZP_01627695.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119458567|gb|EAW39671.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 520
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 239/514 (46%), Gaps = 50/514 (9%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
+AR LLE G++ D + + LNS Y +L + IG + +N+R + E + + +
Sbjct: 39 IARLLLEAGIKREDRIGVLGLNSAAYFAILLGASRIGAVTVSVNFRLAPAELAFVLDDAQ 98
Query: 105 -PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 163
++ VTD++ D Q AI L + + + S F+ + ++ + Y
Sbjct: 99 VDILFVTDDNIDETIT--QTIAIRELPTRL-IANRSDAFLALTTAINQEV-EPYRQIGQV 154
Query: 164 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI-VQSLAKIAIVG-YGEDDVYLHTAPL 221
HS A + +TSGTTG PKG V+SH ++ + + IA G Y D + L APL
Sbjct: 155 DEHSPALQ-----LYTSGTTGKPKGAVLSHRNILSLTQMMGIANDGAYNADTINLVVAPL 209
Query: 222 CHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 281
HIGG A L GA ++ F+ +E ++ VTS+ VPA++ + L+ +
Sbjct: 210 FHIGGTGVAYIGLAYGAHNILHEAFDPLRVVETIQAQSVTSMFMVPAMIQAIVKLVPNVR 269
Query: 282 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 341
+ S++ I G + + L+KEA F ++ YGMTETS ++ ++ D
Sbjct: 270 DYD-FSSLENIAYGASPISATLLKEALEVF-DSRFSQVYGMTETSGTVIALSPEDHDKAI 327
Query: 342 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQ 401
G +P+ + C G V+ + G + G I R A ML Y+++
Sbjct: 328 AG---------SPHLLTSCGKACPGNEVKIVDTEGVELGPNQTGEICLRSASNMLEYFNR 378
Query: 402 FLAKPSVSTGEVWLD----TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
S +T E LD TGD G+ID+ G ++L R + +GGENVYP EVE VL
Sbjct: 379 -----SQATAETLLDGWVMTGDAGTIDEEGYIYLRDRLKDMVVTGGENVYPVEVENVLSG 433
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
PG+I + V+GI + E ++A L+ + ++ ++ + CR+
Sbjct: 434 IPGVIEVAVIGIPDETYGEALLAIFALQPNH----------------MIDADDVIAFCRD 477
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K L GFK PR V P +GKI + +R
Sbjct: 478 K-LAGFKIPRR-VECIPALPRNPSGKILKTTLRE 509
>gi|384044534|ref|YP_005492551.1| o-succinylbenzoate--CoA ligase [Bacillus megaterium WSH-002]
gi|345442225|gb|AEN87242.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium WSH-002]
Length = 487
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 257/550 (46%), Gaps = 79/550 (14%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L + A + N V T T Q+ + V +A+ L G++ GD +A+ NS ++E
Sbjct: 10 LMQRAYLTPNRVAVETPQTSLTFQELHKRVQKVAQQLSFNGVKQGDTIALCMKNSVEFIE 69
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
+ AV++IG V +N R + E + +T +LVTDE+ + E Q + L
Sbjct: 70 ILHAVSYIGARVLLVNTRLTNDEINYQLTDANVSLLVTDEAFLT--REFQSSITQLLSSS 127
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+ + + F +W E I +TSGTTG+PKGV+ +
Sbjct: 128 LKSSPETETY---------------------FQKTWNLEETFTIMYTSGTTGNPKGVLQT 166
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSAL 252
+ S+ +G E D +L PL HI GLS M + G + +FE+++
Sbjct: 167 YGNHWWSSVGSALNLGLNEKDCWLIAVPLFHISGLSILMRSVFYGMKIILEERFEARAVN 226
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
EA+E VT + V ++++++ + +K ++ + +L GGG P +++ N
Sbjct: 227 EAIENKGVTIISVVTSMLSNMLDELAERKY---PNTFRCMLLGGGPAPLTILEACVNK-- 281
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+ + YGMTETSS F+TL +P + G+ GKP
Sbjct: 282 EIPVYQTYGMTETSSQ--FVTL------SPEDSLRKLGS-------------AGKPLFPC 320
Query: 373 ELKVCSDG---SSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGN 428
E+K+ + + G I+ +G +V Y ++ A K ++ G W TGD+G +D+ G
Sbjct: 321 EMKIVDENGNETREAGEIIVKGPNVTKGYLNKPEATKKAIQQG--WFYTGDVGKVDEEGF 378
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
++++ RR+ I SGGENVYP E+E VLL+HP + V G+A+ + ++ AC+ + E+
Sbjct: 379 LYVLDRRSDLIISGGENVYPAEIENVLLKHPAVKEAGVTGVADEKWGQVPAACIVVNEN- 437
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
+S E L H ++ L +K P+ FV + P T++ KI
Sbjct: 438 -----------------VSDEELSLHI-QQFLAKYKLPKYFVRVEE-LPRTASNKI---- 474
Query: 549 VRREVMSHLK 558
+RR++ S ++
Sbjct: 475 IRRKLSSFIQ 484
>gi|119474942|ref|ZP_01615295.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
gi|119451145|gb|EAW32378.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
Length = 557
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 245/552 (44%), Gaps = 78/552 (14%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSF 93
+FVQ V LA GLL +G+ GD V I + N EW+L A A IG I+ +N +
Sbjct: 50 EFVQKVNQLATGLLSLGIEKGDRVGIWSPNR---YEWVLTQFATAKIGAIMVCINPSYRL 106
Query: 94 KEASRAITSIRPVMLVTDES-SDSWYL----------------ELQHTAIPSLRWHVSLG 136
E A+ + ++ ES S+YL EL +P L+ + +G
Sbjct: 107 YELEYALNKVSCKAIIAAESFKTSYYLKMLLELAPELEASKPGELLSKRLPHLKTVIRMG 166
Query: 137 SSSS----DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
++S +F N +M + L L + + P + I FTSGTTG+PKG +S
Sbjct: 167 EATSPGMFNFSNVCEM--GGETECRKLEDL--SKTLDPSDDINIQFTSGTTGTPKGATLS 222
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKS 250
H+ ++ + + + DD+ P+ H G+ + + + +P F+ +S
Sbjct: 223 HTNILNNAYYCGISMHFNADDILCIPVPMYHCFGMVLGTLVCVAHGATMVLPCEAFDPRS 282
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+AV+ T+L VP + LA L + S++ + G P LMK
Sbjct: 283 VLQAVQDEKCTALHGVPTMF--LAELDLADFSDFDLSSLRTGIIAGSTCPVGLMKRLIGE 340
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++ YG TE S + MT + T E + VG+P
Sbjct: 341 MALTEIVIGYGQTE-CSPINSMTAIEDTFER-------------------RVTTVGRPHT 380
Query: 371 HVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+ E+K+ DGS+ G + RG VM YW+ + WL +GD+G +D
Sbjct: 381 NWEMKIIREDGSTAATEETGEVCARGYGVMQGYWEDAERTADTIDSDGWLHSGDLGEMDA 440
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR I GGEN+YP EVE HP I + V G+ + + E V A ++L+
Sbjct: 441 EGFVKITGRIKDMIIRGGENIYPREVEEFFYSHPAIQEVQVFGVPDEKYGEQVAAWIQLK 500
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
E QS +S+E L+Q+C + +T +K P+ L + FP+T TGK++
Sbjct: 501 EG---------QS-------MSAEALQQYCAGQ-ITHYKVPKHIKLVNE-FPMTVTGKLQ 542
Query: 546 RDEVRREVMSHL 557
+ +R E + L
Sbjct: 543 KFIMRDEYATEL 554
>gi|398781291|ref|ZP_10545417.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
gi|396997535|gb|EJJ08491.1| AMP-binding domain protein [Streptomyces auratus AGR0001]
Length = 546
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 249/569 (43%), Gaps = 67/569 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + LSR R ++V + R T + + V +A GLL G+ GD V I A N
Sbjct: 28 LARTLSRFG--DREALVEVASGRRWTYTELGRAVDEVALGLLAKGVTKGDRVGIWAPNCA 85
Query: 69 WYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT---DESSD-SWYLEL 121
EW+L A A IG I+ +N + E + + +LV+ ++SD +E
Sbjct: 86 ---EWVLVQYATAKIGAILVNVNPAYRVHELAYVLRQAGITVLVSATHHKTSDYRRMIEQ 142
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
P LR V +G + +L A S R + + V I +TSG
Sbjct: 143 VRAESPVLRDVVYIGDPTWG-----GLLAAGAAVPQS-RLAECEQTLTADDPVNIQYTSG 196
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACH 240
TTG PKG +SH ++ + Y E D P H G+ + GAC
Sbjct: 197 TTGFPKGATLSHHNILNNGYWVAETLAYTEHDRVCLPVPFYHCFGMVMGNLGATSHGACI 256
Query: 241 VF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V P F++ + L+ V+ TSL VP + +A L S++ + G
Sbjct: 257 VIPAPAFDAATTLQTVQDERCTSLYGVPTMF--IAELNHPDFGSYDLSSLRTGIMAGSPC 314
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P E+MK A++ YGMTETS ++ T D L H+
Sbjct: 315 PEEVMKRVVAEMHMAEVSICYGMTETSP-VSTQTRRDDDL-----------------AHR 356
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSVSTGE 412
+ VG+ PH+E+KV +D +S V G + TRG VML YW++ V
Sbjct: 357 TE--TVGRVLPHIEVKV-ADPASGVTVPRGTPGELCTRGYSVMLGYWEEPERTAEVIDAA 413
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD+ ++D G V +VGR I GGENVYP E+E L HP I + VVG+ +
Sbjct: 414 RWMHTGDLAVMNDDGYVRIVGRIKDMIIRGGENVYPREIEEFLYSHPKIADVQVVGVPDE 473
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E + ACV LR + E L+ + L + CR + L +K PR +
Sbjct: 474 KYGEEIAACVILR---------------DPEDPLTRDELARFCRSR-LAHYKVPRHLDIV 517
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHLKSLP 561
FP+T +GK+R+ E+R + L +P
Sbjct: 518 -DAFPMTVSGKVRKVELRERLARDLGRVP 545
>gi|407982490|ref|ZP_11163166.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376002|gb|EKF24942.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 562
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 236/546 (43%), Gaps = 60/546 (10%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
++V + R T + ++ +ARGLL G+ +GD V I A N EW++ A A
Sbjct: 55 EALVDVPSGRRWTYAELNTEIDLVARGLLAAGIATGDRVGIWAPNCP---EWVILQYATA 111
Query: 79 FIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA--IPSLRWHVS 134
+G I+ +N YR E IR ++ T+ + + + +P L V
Sbjct: 112 KVGAILVTVNPAYRSHELEYVLRHAGIRLLVAATEFKTTDYRAMIAEVRPRLPDLAEVVF 171
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+G+ + D ++ A + LR+ AP + I +TSGTTGSPKG V+SH
Sbjct: 172 IGAGAGDDWDRLRAAGARVSVD-ELRAR--MGVLAPSDPINIQYTSGTTGSPKGAVLSHR 228
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSAL 252
++ ++G+G D P H G+ + IP FE + L
Sbjct: 229 NIVNNGFFVTELIGFGPQDRLCLPVPFYHCFGMVMGNLGCTTHGAAIVIPAAGFEPAATL 288
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
A+E T++ VP + +A L + S++ + G P ELMK N
Sbjct: 289 TAIETERCTAVYGVPTMF--IAMLADPDLPHREVSSLRTGIMAGATCPMELMKRCINELN 346
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
A L AYGMTETS ++ T D L+ + VG+ PHV
Sbjct: 347 MAGLAIAYGMTETSP-VSCQTRVDDDLDR-------------------RTATVGRVHPHV 386
Query: 373 ELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + G TRG VM YW+ + WL TGD+ + +
Sbjct: 387 EIKIVDPVTGKTLPRGATGEFCTRGYSVMTGYWNDAERTREAIDPDGWLHTGDLAVMRED 446
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L HP I + VVG+ + R E + A +++R
Sbjct: 447 GYCQIVGRIKDMVIRGGENVYPREIEEFLHTHPDIEDVQVVGVPDERYGEEICAWIKMRP 506
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L + +R + R+K L FK PR +V+ FP+T TGK+R+
Sbjct: 507 G---------------RPPLDAAAVRAYARDK-LAHFKIPR-YVVVVDEFPMTVTGKVRK 549
Query: 547 DEVRRE 552
++R E
Sbjct: 550 VQMRDE 555
>gi|379059581|ref|ZP_09850107.1| AMP-binding domain protein [Serinicoccus profundi MCCC 1A05965]
Length = 543
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 246/554 (44%), Gaps = 64/554 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R ++V + R T + V DV LAR + G+ +GD V I A N +EW L LA A
Sbjct: 35 REALVEVATGRRWTYAELVADVDLLARAFVASGVGTGDRVGIWAPNCAEWTLVQ-LATAK 93
Query: 80 IGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWY---LELQHTAIPSLRWHVSL 135
IG I+ +N + E + S ++V E + Y + L P L V +
Sbjct: 94 IGAILVTINPAYRAHELGYVLRQSGVSTIVVAREFKGTSYPDLVALVREDCPELAQVVVI 153
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G D L A + R S P+ + I +TSGTTG PKG +SH
Sbjct: 154 GDEGWD------ELLAGAHQVSRGRLAELQASLTPDQPINIQYTSGTTGFPKGATLSHRN 207
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESKSALE 253
++ Y E DV P H G+ +A GAC V P F+ + L
Sbjct: 208 ILNNGYFVGEGCRYTERDVICIPVPFYHCFGMVMGNLAATTHGACMVIPGPGFDPAATLR 267
Query: 254 AVEQHCVTSLITVPAI-MADLATLIRVKK-TWKGRDSVKKILNGGGGLPSELMKEATNSF 311
AV + TSL VP + +A+L + R + + + SV+ + G P+ +M+ ++
Sbjct: 268 AVREEQCTSLYGVPTMFIAELELIERSDEVSLEDLASVRTGIMAGSLCPASVMRTLIDAG 327
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+ I YGMTETS T P+ + VG+ PH
Sbjct: 328 VEEMTI-CYGMTETSPVST--------------------QTAPDDPFDAKVGTVGRVMPH 366
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+++ + V G T+G VML YWD+ K + + W+ TGDIG +D+
Sbjct: 367 LEIQIVDPATREVVPRGTPGEFCTKGYSVMLGYWDE-PEKTAEVLQDGWMATGDIGVMDE 425
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR I GGENVYP EVE L HP ++ VVG+ + R E ++A VRLR
Sbjct: 426 DGYVEITGRIKDLIIRGGENVYPREVEEFLYTHPDVVDAQVVGVPDERYGEELMAWVRLR 485
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
E + L++E ++ C +L +K PR V + FP+T TGK+R
Sbjct: 486 EGAE---------------PLTAEAVKDFCT-GSLAHYKIPR-HVQVIEEFPMTVTGKVR 528
Query: 546 RDEVR---REVMSH 556
+ E+R E++ H
Sbjct: 529 KVELRERGEELLRH 542
>gi|241661951|ref|YP_002980311.1| AMP-binding domain-containing protein [Ralstonia pickettii 12D]
gi|240863978|gb|ACS61639.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 571
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 253/572 (44%), Gaps = 87/572 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+VV N T + F + V LA GL +GL GD + I + N +EW+L A A
Sbjct: 45 EAVVFREQNVRWTWRTFAEQVDALAAGLHALGLERGDRIGIWSPNR---VEWVLTQFATA 101
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHT------------- 124
+G I+ +N + E A+ + +V E+ S YLE+ T
Sbjct: 102 RLGLILVNINPAYRLSELEYALNKVGCKAIVAAEAFKTSRYLEMLQTLAPELASAQPGAL 161
Query: 125 ---AIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV 174
+P+LRW + +G +++ D V + + D L T + +P+ A+
Sbjct: 162 NAAKLPALRWVIRMGEANTPGMLNFADVVARGKSVPVDALDA-------ITATLSPDDAI 214
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAM 233
I FTSGTTG+PKG ++H ++ + + E D PL H G+ S +
Sbjct: 215 NIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQEGDRLCIPVPLYHCFGMVMSVLTC 274
Query: 234 LMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
GAC VF + F+ + L V + T L VP + +A L +++
Sbjct: 275 TATGACMVFPGEAFDPLATLRTVAEERCTQLHGVPTMF--IAQLDHPDFKSFDVSTLRGG 332
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P E+MK + ++ AYGMTETS P +F +
Sbjct: 333 IMAGSPCPIEVMKRVVSELNLREVTIAYGMTETS-------------------PVSFQSA 373
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 406
+ + + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK
Sbjct: 374 VTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKT 430
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 431 AESIHDGWMRTGDLATFDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNV 490
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
G+ + + E V A + L+ Q +E +R C + + +K P
Sbjct: 491 FGVPDPKYGEEVCAWIVLKPGQQATEDE----------------IRAFC-QGQIAHYKIP 533
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
R ++ + P+T TGK+++ +R ++ LK
Sbjct: 534 R-YIRFVTEMPMTVTGKVQKFVMRDRMIEELK 564
>gi|406575797|ref|ZP_11051487.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
gi|404554795|gb|EKA60307.1| AMP-binding domain protein [Janibacter hoylei PVAS-1]
Length = 543
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 244/556 (43%), Gaps = 65/556 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R ++V + R T ++ + DV +ARGL+ G+ +GD V + N +EW + A A
Sbjct: 36 DREALVDVPSGRRWTYRELLTDVDAVARGLMAKGVSAGDRVGTWSPNCAEWTI-LQYATA 94
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE----SSDSWYLELQHTAIPSLRWHVS 134
+G ++ +N + E + MLV+ + S +E +P LR V
Sbjct: 95 RVGAVLVNINPAYRSHELTYVAQQSGLRMLVSAQQHKTSDYRAMVEEVRGQLPDLRDVVY 154
Query: 135 LGSSS-SDFVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+G S ++ V +T D L +G L P+ + I +TSGTTG PKG +
Sbjct: 155 IGDPSWAELVAGGASVTEDQLAERGAGL---------TPDDPINIQYTSGTTGFPKGATL 205
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESK 249
SH ++ ++ Y E D P H G + +A GAC V P FE
Sbjct: 206 SHHNILNNGYFVGELIRYTEADRICIPVPFYHCFGMVMGNLAATSHGACMVIPAPSFEPA 265
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AV TSL VP + +A L S++ + G P E+MK
Sbjct: 266 ATLRAVVDERCTSLYGVPTMF--IAELGLRDFADYDLSSLRTGIMAGSTCPVEVMKRVVA 323
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
A++ +YGMTETS ++ MT D L + VG+
Sbjct: 324 EMNMAEVAISYGMTETSP-VSTMTHTDDDLARRTE-------------------TVGRSM 363
Query: 370 PHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E KV + G + TRG VML YW Q W+ TGD+ ++
Sbjct: 364 PHIESKVVDPVTGVTLPRGETGELCTRGYSVMLGYWQQPDKTAEAIDDARWMHTGDLATM 423
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V +VGR + GGEN+YP EVE L HP I + V+G+ + R E ++A V
Sbjct: 424 DEHGYVEIVGRIKDLVIRGGENIYPREVEEFLYTHPSIADVQVIGVPDERYGEELMAWVV 483
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
LRE L+ + +R+ +K L +K PR +V FP+T TGK
Sbjct: 484 LREGVA---------------SLTVDDVREFAADK-LAHYKIPR-YVHVTDAFPMTVTGK 526
Query: 544 IRRDEVRREVMSHLKS 559
+R+ E+R + L++
Sbjct: 527 VRKVEMREQAGEILRA 542
>gi|432331437|ref|YP_007249580.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
gi|432138146|gb|AGB03073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Methanoregula
formicicum SMSP]
Length = 566
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/567 (26%), Positives = 257/567 (45%), Gaps = 87/567 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI---LAVA 78
++VV++ N T ++F++ V +AR L+ +G+ G+ V I A+N Y EW+ A +
Sbjct: 35 DAVVSMHQNIRWTYKEFLEQVDTVARALMGLGVEKGNRVGIWAMN---YAEWVVVQFATS 91
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPS--------- 128
IG I+ +N + E + ++V S Y+ + + A P
Sbjct: 92 KIGAIMVNINPAYRTYELEYVLKQAEIQTLIVQGRFKTSDYVGMFYEACPEVYECKPGKI 151
Query: 129 -------LRWHVSLGS-------SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV 174
L+ + LG + DF+ K + ++ D LK L F + +
Sbjct: 152 ASEKFPFLKHAIFLGDIPYNGMFTWGDFLKKSEEISVDELKERG-EGLTF------DDPI 204
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAM 233
I +TSGTTG PKGVV++H ++ +G+ + D P H G+ S +A
Sbjct: 205 NIQYTSGTTGFPKGVVLTHHNVLNNGYIIGEGMGFSDKDRLCIPVPFYHCFGMVLSNLAC 264
Query: 234 LMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKK 291
+ G+ V P F+++ L+ VE+ T+L VP + +A+LA K + S++
Sbjct: 265 VTHGSTMVLPAPTFDAEEVLKTVEKEHCTALHGVPTMFIAELAHPNFAKYDLR---SLRT 321
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+ G P E+MKE ++++ YG TET+ +T T DP
Sbjct: 322 GIMAGSPCPIEVMKEVNTRMNMSEIVIVYGQTETAPGVTMTTTKDPL------------- 368
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 405
+ VG+ PH ELK+ + + G I RG VM Y++ A
Sbjct: 369 -------DRRVTTVGRAFPHTELKIIDPNTGKIVPTGAIGEICARGYCVMKCYYNNPAAT 421
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ + W TGD+G++DD G +VGR + GGEN+YP E+E L H I +
Sbjct: 422 HATLDKDRWNHTGDLGTMDDEGYFKIVGRLKDMVIRGGENIYPREIEEFLHHHEKISDVY 481
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
+ G+ + + E + A V+L+ + ++ + ++ +C+ K + +K
Sbjct: 482 ITGVPDVKYGEELCAWVKLKPG----------------VTMTEQEVKDYCKGK-IARYKI 524
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRRE 552
PR +VL+ + FP+T +GKI++ ++R E
Sbjct: 525 PR-YVLFVQEFPITISGKIQKFKMREE 550
>gi|423460128|ref|ZP_17436925.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X2-1]
gi|401141696|gb|EJQ49249.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X2-1]
Length = 496
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 242/543 (44%), Gaps = 73/543 (13%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ + IT T +Q + V +A L+ E+ ++ G+ +AI + NS Y+ + A+A +
Sbjct: 17 DRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I PLN R + E + ++L +E+ + L +Q +
Sbjct: 77 ECIAVPLNIRLTENELIFQLKDSGTIVLFVEETFHNMALSMQKVS--------------- 121
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
+V + +T+ LK R + + IIC+TSGTTG PKG V++ + +
Sbjct: 122 -YVQRVISITS--LKEIEDRKIDNFEEINESASFIICYTSGTTGKPKGAVLTQENMFWNA 178
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHC 259
L + D + PL HIGG+ A L G + KFE +AL +E+H
Sbjct: 179 LNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIIPRKFEPTTALSMIEKHK 238
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI-S 318
VT ++ VP I L + + T SV+ NGG P ELM+E + + L
Sbjct: 239 VTVVMGVPTIHQALINCAKFETT--NLQSVRWFYNGGAPCPEELMREFID---RGFLFGQ 293
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
+GMTETS ++ ++ D + +GKP E +
Sbjct: 294 GFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPVLFCEYVLID 332
Query: 379 DGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ + VG +L RG +VM YW++ A + ++ G WL TGD+ +D+ G V++V
Sbjct: 333 ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLYTGDLAKVDEDGFVYIV 390
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR+ I SGGEN+YP EVE V+ + + + VVG R+ +W E
Sbjct: 391 GRKKDMIISGGENIYPLEVEQVINKISEVYEVAVVG----------------RQHVKWGE 434
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
KN L+ + + +HCR L +K P+ V + P +TGKI++ ++ +
Sbjct: 435 IPIAFIVKNSSSELTEKEVIEHCR-LFLAKYKLPKEIVFLEE-LPKNATGKIQKAQLANQ 492
Query: 553 VMS 555
+ S
Sbjct: 493 LKS 495
>gi|334345488|ref|YP_004554040.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102110|gb|AEG49534.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 555
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 255/569 (44%), Gaps = 67/569 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHN----TGQQFVQDVLNLARGLLEIGLRSGDIVAISA 64
I Q L R A + + ++ RH T ++ ++V +A GLL +G+R GD V I A
Sbjct: 23 IGQALRRAALQWPDELALVS--RHQRLRWTWRELDREVDRVASGLLHLGIRKGDRVGIWA 80
Query: 65 LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD--SWYL 119
N + A A IG I+ +N + E + +LVT ++SD +
Sbjct: 81 ANCAEWAVIQFASARIGAILVTINPAYRVSEVEYVLAKAGCSLLVTAARFKTSDYIAMLR 140
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIIC 177
E+ A+P LR V+LG + V + D L A D+ +L + + +P+ A+ +
Sbjct: 141 EIDPNAMPLLRIKVALGEEVQEGVLRWDDLRAEPDVPALTALEA-----ALSPDDAINVQ 195
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMV 236
FTSGTTG PKG ++H ++ + + D PL H G+ +A L
Sbjct: 196 FTSGTTGFPKGATLTHRNILNNAHFTGRTINLTNADRICIPVPLYHCFGMVLGNLAALTS 255
Query: 237 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA V+ + ++ L+A+E T+L VP + +A L R +++ +
Sbjct: 256 GAAMVYPGEAYDPTLVLQAIEAEGCTALYGVPTMF--IAILARTDLDSYNVSTLRTGIMA 313
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P+ M++ + ++ YGMTETS T DP E G
Sbjct: 314 GAPCPATTMRQVMDQLNMREITIGYGMTETSPLTTQTATDDPLEERAG------------ 361
Query: 356 SVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVST 410
VG+ PH E K+ DG + G +RG VM YWD+
Sbjct: 362 --------TVGRVHPHAEAKIVGPDGKTLPIGEQGEYCSRGYAVMQGYWDEPERTAEAID 413
Query: 411 GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
+ W+ +GD+ +D+ G + + GR + GGEN+YP E+E LL HP I V G+A
Sbjct: 414 ADGWMHSGDLAVMDEKGYIRITGRIKDMVIRGGENIYPREIEEFLLTHPQIQDAQVFGVA 473
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LF 529
+ +L E V A W ++ + LS + + HCR N+ +K PR +
Sbjct: 474 DEKLGEEVCA-------WVIAKPGAE---------LSVDGVLAHCR-GNIAHYKVPRHVR 516
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
V+ R FP+T TGK ++ ++R+ + + L+
Sbjct: 517 VVPR--FPMTVTGKAQKFQMRKMMETELR 543
>gi|339008758|ref|ZP_08641331.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
gi|338774558|gb|EGP34088.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
Length = 526
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 241/540 (44%), Gaps = 82/540 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T QQ + A+ + GL++GD A+ + NS ++ A+A G I+ P+NY +
Sbjct: 37 TYQQLDSLINQTAQYICSKGLQTGDRAAVLSRNSLDFVIVTFALAKAGVIMVPINYMLNV 96
Query: 94 KEASRAI-------TSIRPVML-VTDESSDSWYLELQHTAI------PSLRWHVSLGSSS 139
++ + + + P L V D++++ EL+ AI P L W + L +
Sbjct: 97 EDVAYIMGHAEIQACFVAPEFLAVADKANEIANCELRLRAIISSPADPILEW-MPLRTMI 155
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ 199
+D + D + I +TSGT PKGV+++H LI Q
Sbjct: 156 ADLPTVEPDVNLD-----------------DDDVAQIMYTSGTESKPKGVMLTHKNLIAQ 198
Query: 200 SLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFIPKFESKSALEAVEQH 258
++ I E D+ +H PL H L + L VGA + LE VE++
Sbjct: 199 YMSVILDGDLTEQDILVHALPLFHSAQLHCFLGPHLYVGASGTILEHAAPALMLETVERY 258
Query: 259 CVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLIS 318
T L P + +A L + S++K G +P E++KE P++KL +
Sbjct: 259 GATQLFCPPTVW--IALLRSEDFAARNLSSLQKCYYGAAIMPVEIIKELCMRLPQSKLYN 316
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
YG TE + T + +D +T GKPA HVE K+
Sbjct: 317 FYGQTEVAPLATVLKPHDQLRKTGS---------------------AGKPALHVETKIVD 355
Query: 379 DGSS-----HVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ + H+G I+ R +H+ML Y+ D+ + + G W +GD+GS+D+ G + +V
Sbjct: 356 ESGNEVPIGHIGEIVHRSSHIMLGYFKDEEKTRSAFQGG--WFHSGDLGSMDEEGYITVV 413
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R+ IK+GGENV E+E + QHP + + V+GI + E V A V
Sbjct: 414 DRKKDMIKTGGENVASREIEEWMYQHPKVSEVAVIGIPHPYWIEAVTAIVV--------- 464
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
+N + + +ELL Q C+ K L+ FK P+ FV+ P +GKI + E+RR+
Sbjct: 465 ANAGEEIETEELL-------QFCK-KGLSSFKVPK-FVVVTDQLPRNPSGKIVKRELRRQ 515
>gi|119503808|ref|ZP_01625890.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460316|gb|EAW41409.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 558
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 243/556 (43%), Gaps = 76/556 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI---LAVAFIGGIVAPLNYR 90
T +Q + V LA G L +G+ GD V I NS EW+ LA A IG I+ +N
Sbjct: 49 TYRQLQEQVDQLAGGFLALGVAPGDRVGIWGPNS---YEWVMVQLATAKIGAIMVCINPA 105
Query: 91 WSFKEASRAITSIRPVMLVTDES-----------------SDSWYLELQHTAIPSLRWHV 133
+ E A+ + ++VT E +DS LQ +P LR +
Sbjct: 106 YRLYELEFALNKVECTVVVTAEKFKTSDYLGMLNTLAPELADSKPGALQAQKLPYLRTVI 165
Query: 134 SLGSSSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+G++ + + + + G LR+L P+ A+ I FTSGTTG+PKG +
Sbjct: 166 RMGTAETAGMPNFETVCGLGGEKDGDQLRAL--RGQLKPDDAINIQFTSGTTGNPKGATL 223
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESK 249
+H ++ + E D PL H G+ A +A + G+ VF + F+
Sbjct: 224 THCNILNNGYLAGEAMQLTETDRLCIPVPLYHCFGMVLAVLACVSHGSAMVFPGEAFDPL 283
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
L+ VE T+L VP + + L + S++ + G P E+MK +
Sbjct: 284 ETLQTVEAEGCTALHGVPTMF--ITELDHPRFGEFDLSSLRTGIMAGAPCPVEIMKRVIS 341
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ YG TE S L MTL PN + + VG+
Sbjct: 342 EMHMEDILIGYGQTEVSP-LNHMTL-------------------PNDSLERRTETVGRAV 381
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
P VE+KV D S+ V G I TRG VM YW+ WL +GD+ ++
Sbjct: 382 PWVEIKVI-DQSNRVVAIGEKGEICTRGYSVMREYWNDPERTAETIDEAGWLHSGDLATM 440
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V +VGR I GGEN+YP EVE L QHP I + V GI + ++ E V A V+
Sbjct: 441 DEEGYVRIVGRIKDMIIRGGENIYPREVEEFLYQHPAISEVQVFGIPHEKMGEEVCAWVQ 500
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L E +E L+ C ++ +T FK PR V + +P+T TGK
Sbjct: 501 LNEGQSMTEDE----------------LKAFCNDQ-ITHFKIPR-HVRFVTEYPMTVTGK 542
Query: 544 IRRDEVRREVMSHLKS 559
I++ +R ++++ L
Sbjct: 543 IQKFVMRDQMVAALNE 558
>gi|311029638|ref|ZP_07707728.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. m3-13]
Length = 524
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 260/548 (47%), Gaps = 68/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++ + N T +++ +V LA LL+ G++ GD V+ N+E +LA A I
Sbjct: 19 KEALYDVKKNVRYTYKEWNVEVNRLANALLKEGVKKGDRVSTLLFNTEELATTMLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTD--------------ESSDSWYLELQHTAI 126
G + P+N+R +E + +T +P +++ + E + W ++ + T+
Sbjct: 79 GAVFNPINFRLQPEEVAFILTDAKPKVVMYEKALEPVIASIAARFEETGFWIIDGEQTSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H L S+S++ V T ++L+ ++A I +TSGTTG P
Sbjct: 139 -SFSYHERLKSASTEEV------TINVLE---------NDTYA------IMYTSGTTGRP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK 245
KGVV H + QSL I+ +D+ L TAP+ H L A + + VG +V +
Sbjct: 177 KGVVHRHRDMAEQSLIVISATKLETEDIGLVTAPMFHCAELHCAVIPRIHVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
FE K L+ +++ VT P + L++ S+ L G + L++
Sbjct: 237 FEPKKVLQLIQEEKVTKFFAAPTMWN---MLLQENFNEYNLSSLNLGLYGAAPMAPALVR 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A + L+ AYGMTE ++TF++ D L G QA N H+ + V
Sbjct: 294 -ACHDLLGISLVQAYGMTEMGPAITFLSEKD-QLRKAGSAGQACLN------HEIRIVRP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+ P + G + G IL +G +M Y+++ A + + + W +GDIG +D+
Sbjct: 346 NEDGPSDPDDMLPAGEA--GEILVKGPCIMSAYFNREEAT-AAAMYKGWYHSGDIGYLDE 402
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +++ R + I SGGEN+YP EVE VL +HP ++ + +VG+ + R E V A V ++
Sbjct: 403 EGFLYVKDRVDDMIISGGENIYPREVEDVLYEHPAVLDVAIVGLPDDRWGETVTAFV-VK 461
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
++ +E D N SSE+ R +K PR + ++ P ++GKI+
Sbjct: 462 KNENVTEEELDAFCLN-----SSELAR----------YKRPRKY-MFVDALPRNASGKIQ 505
Query: 546 RDEVRREV 553
+ +R+++
Sbjct: 506 KFVLRKQM 513
>gi|29828572|ref|NP_823206.1| AMP-binding domain protein [Streptomyces avermitilis MA-4680]
gi|29605676|dbj|BAC69741.1| putative acyl-CoA synthetase [Streptomyces avermitilis MA-4680]
Length = 540
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 238/549 (43%), Gaps = 65/549 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R+++V + R T +F V +A GLL G+ GD V I A+N EW+L A
Sbjct: 33 DRDALVDVPSGRRWTYAEFGAAVDEVALGLLAKGVLKGDRVGIWAVNCP---EWVLVQYA 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYLELQ-HTAIPSLRWH 132
A IG I+ +N + E + + +LV +SSD L Q P LR
Sbjct: 90 TARIGAIMVNINPAYRAHELAYVLRQAGISVLVASLAHKSSDYRALVDQVREKCPELRET 149
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +G S + LTA R + + + V I +TSGTTG PKG +S
Sbjct: 150 VYIGDPSWE------ALTAGAASVPYERLIAGAADLSCDDPVNIQYTSGTTGFPKGATLS 203
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVF-IPKFESKS 250
H ++ VGY E+D PL H G+ A+ GAC V P F+ +
Sbjct: 204 HHNILNNGYWVGRTVGYTEEDRVCLPVPLYHCFGMVMGALGATSHGACIVLPAPSFDPAA 263
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 264 TLAAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVMKRVVAE 321
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
A++ YGMTETS ++ T D LE H+ VG+ P
Sbjct: 322 MHMAEVSICYGMTETSP-VSLQTRRDDDLE-----------------HRTG--TVGRVLP 361
Query: 371 HVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+KV G + TRG VML YWD+ W+ TGD+ +
Sbjct: 362 HIEVKVVDPAGGVTVPRGTAGELCTRGYSVMLGYWDEPEKTAEAVDAGRWMHTGDLAVMR 421
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E V+ACV
Sbjct: 422 ENGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVVGVPHERYGEEVLACVIP 481
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGK 543
R+ + E L C + L +K P RL +L FP+T +GK
Sbjct: 482 RDPADPP---------------TLEELWAFC-DGQLAHYKIPSRLRIL--DSFPMTVSGK 523
Query: 544 IRRDEVRRE 552
+R+ E+R +
Sbjct: 524 VRKIELREQ 532
>gi|410455559|ref|ZP_11309436.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409929040|gb|EKN66130.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 512
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 236/529 (44%), Gaps = 57/529 (10%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T + F ++V LA GLL+ G+ GD +A+ NS+ ++ A A IG + P+N+R
Sbjct: 25 RSYTYRGFNEEVNRLAHGLLQKGVNKGDKLALMMKNSDHFVFTFFAAAKIGAVAVPVNFR 84
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLT 150
+ E + ++V D+ + E + + +R +++G + + +
Sbjct: 85 LTATEVQYILEQSDAAIVVCDKEFEQIIAEAKKGTV--VRMVITVGEPETVGFYSYEKIL 142
Query: 151 ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 210
AD + + + V I +TSGTTG PKG + HS + ++ + +
Sbjct: 143 ADCTDEPDIE-------VSEKDDVEILYTSGTTGRPKGALFDHSQIFKVGISVVINMEIS 195
Query: 211 EDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI 269
+ + LH APL H L+ + + + +GA H+ F L+A+++H +T L VPA+
Sbjct: 196 QHERILHLAPLFHSAQLNLFLISGVALGATHIIHRDFHPVKTLQAIQEHKITHLFAVPAM 255
Query: 270 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 329
L + + S+K++ G + EL+K++ F + + G+TE
Sbjct: 256 YNFLLQVPNAAEY--DLTSIKRVGYGAAPMAPELVKKSMQLFKTDQFYNLCGLTEAGPG- 312
Query: 330 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV----- 384
L DP + H +G GKP E +V ++ V
Sbjct: 313 --GILLDPE---------------GHKFHLGKG---GKPIFMTETRVVNEEGKDVLPGVI 352
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 444
G + R VM Y+ + S G WL TGD+ +ID G + LV R+ I SGGE
Sbjct: 353 GEFIVRSPMVMKEYYKKPEETKSTLKGG-WLYTGDLATIDGEGYITLVDRKKDMIISGGE 411
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 504
NVY EVE VL +HP I+ ++G+ + W E+ C +
Sbjct: 412 NVYSVEVEGVLFEHPAILDAAIIGLPDE----------------VWGEAVCAIIVPKEGT 455
Query: 505 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
++ + LR CREK L G+K PR + + P ++GKI + ++R+++
Sbjct: 456 VIDEQELRSFCREK-LAGYKVPRR-IFIEEQLPRNASGKILKYQLRQKM 502
>gi|52143488|ref|YP_083341.1| acyl-CoA synthetase [Bacillus cereus E33L]
gi|51976957|gb|AAU18507.1| AMP-binding protein [Bacillus cereus E33L]
Length = 496
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 252/556 (45%), Gaps = 73/556 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A + ++ ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITDEEEMTYKQLHEYVNKVAAYFIYDLHVQKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTLLFVEETFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+ S+ S +S LK R + + IIC+TSGTTG PK
Sbjct: 122 ---YVQSVISITS-------------LKEIEDRKIDNFEEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP E ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLYTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K FP
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKEFPKN 479
Query: 540 STGKIRRDEVRREVMS 555
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLTNQLKS 495
>gi|403279572|ref|XP_003931321.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 615
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 264/584 (45%), Gaps = 79/584 (13%)
Query: 9 ICQCLSRIA--AVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ QCL A +R +++ + N T Q + V A GLL IGLR GD + + N
Sbjct: 74 VGQCLEATAQRVPEREALIVLHENVRLTFAQLKEKVDKAASGLLSIGLRKGDRLGMWGPN 133
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLELQHT 124
S ++ LA A G I+ +N + E + + + ++ S +Y L+H
Sbjct: 134 SYAWVLMQLATAHAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKSQQYYNILKHI 193
Query: 125 A---------------IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW- 168
+P L +S+ + + +++ A + + L L +T +
Sbjct: 194 CPELENAQPGALKSQRLPDLTMAISVDAPLPGTLLLDEVVAAGSTQQH-LDQLQYTQQFL 252
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT---------- 218
+ + I FTSGTTGSPKG +SH ++ S+ ++G + + LH
Sbjct: 253 SCHDPINIQFTSGTTGSPKGATLSHYNIVNNSI----LIG---ERLKLHEKTPEKLRIVL 305
Query: 219 -APLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
PL H +G + M LM GA + P F K ALEA+ + L P + D+
Sbjct: 306 PCPLYHCLGSVGGTMVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN 365
Query: 276 LIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
+ + D S+ GG + EL++ N +L AYG TE +S +TFM
Sbjct: 366 ----QPDFSSYDISSMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMC 420
Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAH 393
L + T+E Q ++ G + P++ + + GK A EL G + RG
Sbjct: 421 LPEDTVE---QKAESVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYC 467
Query: 394 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 453
VML YW + V + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 468 VMLGYWGEPRKTEEVVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELED 527
Query: 454 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 513
L HP + + VVG+ + R+ E + AC+RL+ ES + E ++
Sbjct: 528 FLHTHPKVQEVQVVGVKDDRMGEEICACIRLKSG---EES-------------TPEEIKA 571
Query: 514 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
C+ K ++ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 572 FCKGK-ISHFKIPR-YIVFVTEYPLTISGKVQKFKLREQMERHL 613
>gi|375266073|ref|YP_005023516.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. EJY3]
gi|369841394|gb|AEX22538.1| long-chain-fatty-acid--CoA ligase [Vibrio sp. EJY3]
Length = 512
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 250/569 (43%), Gaps = 78/569 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L R AA K + I G+ + QF +A L+ G++ GD VA+S N
Sbjct: 2 NLAAALQRNAASKPDKTALICGDLEISYSQFDAIAGKIATSLINSGVKPGDRVALSCPNL 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT-AI 126
++ AV G + PLN + R + ++S+ ++ + T +
Sbjct: 62 PFFAFIYFAVQKAGAVAVPLN----------VLLKAREIKYHLEDSNAKFFFCFEGTPEL 111
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLT--ADI-------LKGYSLRSLPFTHSWAPEGA---V 174
P R V N M AD+ L + +R + + P A
Sbjct: 112 PMAREGVKAFKEVETCENMVVMTQSQADLEWGGVPTLNAF-IRDVEPLSDYVPRNADDTC 170
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AM 233
++ +TSGTTG PKG ++ +++ ++ I+ DDV+L T PL H G + + A
Sbjct: 171 VVLYTSGTTGMPKGAELTQQNIVMNAIVGQNIMAAQGDDVHLVTLPLFHTFGQTVHLNAS 230
Query: 234 LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
++ GA V +P+FE LE +E+H VT VP + + + + S++
Sbjct: 231 VLSGATLVLVPRFEPSHVLELIEKHKVTIFAGVPTMYIGM---LHADADYD-ISSLRVAA 286
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
+GG LP+E+ + F ++ YG++ETS F L +
Sbjct: 287 SGGSSLPTEVFRAFEEKF-NVPILEGYGLSETSPIACFNHLDQERI-------------- 331
Query: 354 PNSVHQP-QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
P SV QP QGV V V+L+ G I+ RG +VM Y L +P V+
Sbjct: 332 PGSVGQPIQGVEVKL----VDLEGNQVPVGEEGEIIVRGHNVMKGY----LGRPEVTESV 383
Query: 413 V---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W TGD+G D+ GN+++V R I GG NVYP E+E V + HP + + V+GI
Sbjct: 384 LKNGWFHTGDVGRFDEAGNLYIVDRIKDLIIRGGFNVYPREIEEVFMTHPAVAMVAVIGI 443
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ E + A V L+ DQ + +L Q ++L FK PR F
Sbjct: 444 PHQEYGEEIKAYVVLKP---------DQDLEAADL--------QAWGREHLAAFKYPR-F 485
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
V R P+++TGKI ++RE+ S LK
Sbjct: 486 VEIRDQLPMSATGKI----LKRELKSELK 510
>gi|290956371|ref|YP_003487553.1| long-chain-fatty-acid-CoA ligase [Streptomyces scabiei 87.22]
gi|260645897|emb|CBG68988.1| putative long-chain-fatty-acid-CoA ligase [Streptomyces scabiei
87.22]
Length = 530
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 167/551 (30%), Positives = 236/551 (42%), Gaps = 72/551 (13%)
Query: 16 IAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL 75
+A R +V + R T +F DV LA GLL G+ GD V I A+N EW+L
Sbjct: 30 VAWPDREVLVDVPSGRRWTYARFAADVDALAYGLLASGIAKGDRVGIWAVNCP---EWVL 86
Query: 76 ---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES---SD-SWYLELQHTAIPS 128
A A IG I+ +N + E + +L +S SD +E P
Sbjct: 87 VQYATARIGAIMVNINPAYRTHEVEYVLHQAGVGLLFASQSHKGSDYRAMVEQVRGRCPK 146
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
LR V +G D A I +G +P+ + + + I +TSGTTG PKG
Sbjct: 147 LRETVFIGDPGWD---------ALIARG---TPVPY-EELSCDDPINIQYTSGTTGFPKG 193
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKF 246
+SH ++ + Y E D P H G+ +A GAC V P F
Sbjct: 194 ATLSHHNILNNGYFVGESLAYTEQDRICVPVPFYHCFGMVMGNLAATSHGACVVIPAPSF 253
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + LEAV Q TSL VP + +A L S++ + G P E+MK
Sbjct: 254 DPGATLEAVRQERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVMKR 311
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
++ YGMTETS ++ T D LE + VG
Sbjct: 312 VVTEMHMREVAICYGMTETSP-VSTQTRRDDDLEH-------------------RTATVG 351
Query: 367 KPAPHVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+KV + G + TRG VML YW++ W+ TGD+
Sbjct: 352 RVLPHIEVKVVDPVTGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDAGRWMHTGDL 411
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++ + G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E V+A
Sbjct: 412 ATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVVGVPHERYGEEVLA 471
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LFVLWRKPFPLT 539
CV E + L+ E LR +C E L +K P L VL FP+T
Sbjct: 472 CVVPHEGAE---------------PLTLEELRAYC-EGRLAHYKIPSALRVL--DSFPMT 513
Query: 540 STGKIRRDEVR 550
+GK+R+ E+R
Sbjct: 514 VSGKVRKIELR 524
>gi|288553808|ref|YP_003425743.1| AMP-dependent synthetase and ligase [Bacillus pseudofirmus OF4]
gi|288544968|gb|ADC48851.1| AMP-dependent synthetase and ligase [Bacillus pseudofirmus OF4]
Length = 491
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 146/533 (27%), Positives = 240/533 (45%), Gaps = 84/533 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q+ + LA L + G++ GD +A+ + N Y + + A +G I PLN+R S
Sbjct: 31 TYQELNERAERLAGMLQQRGIKKGDRIALLSPNHISYFDLLFAATKLGAIFVPLNWRLSS 90
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E + + P ++ DE ++ L +PS V L +++ K A
Sbjct: 91 TELAYIFSDCEPSLVFVDEI----FISLVDGGVPS----VQLNQEYKEWIAK----AAPC 138
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
K S P +++ +T GTTG PKGVV++H ++ + I G DD
Sbjct: 139 KKEEISDSDP----------LLLIYTGGTTGLPKGVVLTHQSVFFNMINTITSWGLTSDD 188
Query: 214 VYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMAD 272
+ + P+ H GGL++ ++ +L +G + +F+ + ++ +E+ T ++ VP +
Sbjct: 189 KTITSLPMFHTGGLNALSLPILHIGGTVILSDQFDGEKTIQLIEEFQCTVILLVPTMYHL 248
Query: 273 LATLIRVKK-TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI--SAYGMTETSSSL 329
L K+ T++ SV L+GG + K +F K L YG+TE +
Sbjct: 249 LIKAPSFKEATFR---SVHTFLSGGAPCSYVIYK----AFQKKGLAFKEGYGLTEAGPNN 301
Query: 330 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----SHV 384
F + P+ +G VGKP + E+K+ + V
Sbjct: 302 FF--------------------IDPSEAVSKRG-SVGKPMLYNEVKIIKENGEEADHDEV 340
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKS 441
G I RG HV YW KP ++T V WL TGD+G D G ++VGR+ I +
Sbjct: 341 GEICIRGLHVFDSYWQ----KPEITTNTVINGWLHTGDLGRRDKEGYFYIVGRKKDMIIT 396
Query: 442 GGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKN 501
GGENVYP EVE VL +HP + VVG+A+ + E+V A + ++
Sbjct: 397 GGENVYPLEVEHVLNEHPAVSEAAVVGLADEKWGEVVSAFIVVK---------------- 440
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 554
K LS E L HC ++ L +K P+ + + + P T GK+ + ++ E +
Sbjct: 441 KNFTLSEEELLAHC-QRTLGRYKIPKR-ITFVEELPKTPVGKVDKKKLFTEAV 491
>gi|392410413|ref|YP_006447020.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfomonile
tiedjei DSM 6799]
gi|390623549|gb|AFM24756.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfomonile
tiedjei DSM 6799]
Length = 501
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 213/466 (45%), Gaps = 44/466 (9%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
LA L E G+ GD VAI N+E + A IG I LN+R E +
Sbjct: 40 QLADYLKEQGIGGGDRVAILCKNNEHVGTTLFAAGKIGAIAVMLNWRLQVAELEYILRDC 99
Query: 104 RPVMLVTD-ESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL 162
P LV D E SD+ ++ T IP +R + GS SD + + LKG S ++
Sbjct: 100 TPSCLVYDAEFSDA--IQALRTNIP-IRNFIRKGSDGSD------IEFEEALKGRS--AV 148
Query: 163 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 222
S + II +TSGTTG PKG V++H L S A + + D +L APL
Sbjct: 149 DPECSAGGDDPAIIMYTSGTTGKPKGAVLTHDNLFWSSTAISHTIEWNYDHRFLSIAPLF 208
Query: 223 HIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
HIGGL+ + + G+ F+P F+ + + +T++++VP ++ A L+ K
Sbjct: 209 HIGGLAPLITNVHKGSTTFFMPNFDPVAVWNTIATERITTMMSVPLMLQ--AMLMVAKAR 266
Query: 283 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 342
S+K I G +P L++ + K+ YG+TE S ++TF T P ++
Sbjct: 267 TVDASSLKTITCGASSVPESLIRAYLDM--GVKVQQVYGITEYSGAVTFWTHDMPLEKSN 324
Query: 343 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVML 396
Q GKP H +LK+ S VG IL +G V
Sbjct: 325 SQ---------------------GKPVFHGDLKIVDPQSGVPLPTGEVGEILCKGPMVFK 363
Query: 397 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 456
YWD A + + W +GD+G +D G ++V R I SGGEN+YP E+EAV+
Sbjct: 364 EYWDNPEATRAAFV-DGWYRSGDLGRVDTEGFFYVVDRLKDMIISGGENIYPAELEAVIC 422
Query: 457 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
PG+ VVG+ ++R E+ VA V ++ Q S + K +
Sbjct: 423 MCPGVAETAVVGLPDSRWGEIPVAYVVVKPDQQVSAEDIMNVCKQR 468
>gi|403279578|ref|XP_003931324.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 4 [Saimiri boliviensis boliviensis]
Length = 645
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 264/584 (45%), Gaps = 79/584 (13%)
Query: 9 ICQCLSRIA--AVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ QCL A +R +++ + N T Q + V A GLL IGLR GD + + N
Sbjct: 104 VGQCLEATAQRVPEREALIVLHENVRLTFAQLKEKVDKAASGLLSIGLRKGDRLGMWGPN 163
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLELQHT 124
S ++ LA A G I+ +N + E + + + ++ S +Y L+H
Sbjct: 164 SYAWVLMQLATAHAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKSQQYYNILKHI 223
Query: 125 A---------------IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW- 168
+P L +S+ + + +++ A + + L L +T +
Sbjct: 224 CPELENAQPGALKSQRLPDLTMAISVDAPLPGTLLLDEVVAAGSTQQH-LDQLQYTQQFL 282
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT---------- 218
+ + I FTSGTTGSPKG +SH ++ S+ ++G + + LH
Sbjct: 283 SCHDPINIQFTSGTTGSPKGATLSHYNIVNNSI----LIG---ERLKLHEKTPEKLRIVL 335
Query: 219 -APLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
PL H +G + M LM GA + P F K ALEA+ + L P + D+
Sbjct: 336 PCPLYHCLGSVGGTMVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN 395
Query: 276 LIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
+ + D S+ GG + EL++ N +L AYG TE +S +TFM
Sbjct: 396 ----QPDFSSYDISSMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMC 450
Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAH 393
L + T+E Q ++ G + P++ + + GK A EL G + RG
Sbjct: 451 LPEDTVE---QKAESVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYC 497
Query: 394 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 453
VML YW + V + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 498 VMLGYWGEPRKTEEVVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELED 557
Query: 454 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 513
L HP + + VVG+ + R+ E + AC+RL+ ES + E ++
Sbjct: 558 FLHTHPKVQEVQVVGVKDDRMGEEICACIRLKSG---EES-------------TPEEIKA 601
Query: 514 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
C+ K ++ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 602 FCKGK-ISHFKIPR-YIVFVTEYPLTISGKVQKFKLREQMERHL 643
>gi|407984492|ref|ZP_11165107.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407373902|gb|EKF22903.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 473
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 236/537 (43%), Gaps = 83/537 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T + V + A ++G+ GD VAI A NS EWI+A AF
Sbjct: 11 DAEAVVDGPLRLTFTELVHRIRCAAGAFADLGIDKGDRVAIWAPNSA---EWIIA-AFGL 66
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ EA+ I + R V++ +L +TA P+ V +
Sbjct: 67 LTAGGVLVPVNTRFKTDEAADIIGRSKARAVLV------QKGFLGQDYTA-PA---GVPV 116
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + + FTSGTTG PKG +++H
Sbjct: 117 IDLKSDFLSS---------------GKPFAREVSGTDIADVIFTSGTTGRPKGAMMNHRQ 161
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ + E D YL P H GL + + A + GA V + F+ A+E
Sbjct: 162 TLRMYEEWATLADLREGDRYLMINPYFHTFGLKAGLVASFLRGATMVPMAVFDIDRAVEL 221
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ +T L P + L +R K +++ + G +P EL++ + P
Sbjct: 222 IERERITMLPGPPTLYHSLLA-VRDKSKLA---TLRAAVTGAADIPVELIRRIRDELPFQ 277
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG P+ G P VE+
Sbjct: 278 SLMTGYGLTEAGNV---------TLSRPGDTPEQVAT------------TAGLPCDGVEV 316
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG +L RG VM Y D +A + WL TGD+G+ DD G + ++GR
Sbjct: 317 RIADDGE-----VLVRGYGVMQGYLDDPVATAEAIDADGWLHTGDLGNFDDTGRLRIIGR 371
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E L+QHP + V+G+ + RL ++ A V L
Sbjct: 372 KKDMFIVGGFNAYPAEIEGFLMQHPAVAQAAVIGVPDERLGQVGKAFVVL---------- 421
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K+ +S++ L RE+ + GFK PR +V + PL +TGK+ +D++++
Sbjct: 422 -----KDGAPAVSADDLIAWSRER-MAGFKVPR-YVEFLDALPLNATGKVMKDQLQK 471
>gi|421872046|ref|ZP_16303665.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
gi|372458658|emb|CCF13214.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
Length = 528
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 148/534 (27%), Positives = 244/534 (45%), Gaps = 70/534 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T QQ + A+ + GL++GD A+ + NS ++ A+A G I+ P+NY +
Sbjct: 39 TYQQLDSLINQTAQYICSKGLQTGDRAAVLSRNSLDFVIVTFALAKAGVIMVPINYMLNV 98
Query: 94 KEASRAITS-------IRPVML-VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNK 145
++ + + + P L V D++++ EL+ AI S S + +++
Sbjct: 99 EDVAYIMGHAEIQACFVAPEFLAVADKANEIANCELRLRAIIS-----SPADPNLEWMPL 153
Query: 146 RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 205
R M+T L ++ + + I +TSGT PKG +++H LI Q ++ I
Sbjct: 154 RTMIT-------DLPTVEPDVNLDDDDVAQIMYTSGTESKPKGAMLTHKNLIAQYMSVIL 206
Query: 206 IVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFIPKFESKSALEAVEQHCVTSLI 264
E D+ +H PL H L + L VGA + LE VE++ T L
Sbjct: 207 DGDLTEQDILVHALPLFHSAQLHCFLGPHLYVGASGTILEHAAPALMLETVERYGATQLF 266
Query: 265 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 324
P + +A L + S++K G +P E++KE P++KL + YG TE
Sbjct: 267 CPPTVW--IALLRSEDFAARNLSSLQKCYYGAAIMPVEIIKELGMRLPQSKLYNFYGQTE 324
Query: 325 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-- 382
+ T + +D +T GKPA HVE K+ + +
Sbjct: 325 IAPLATVLKPHDQLRKTGS---------------------AGKPALHVETKIVDESGNEV 363
Query: 383 ---HVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGR 438
H+G I+ R +H+ML Y+ D+ + + G W +GD+GS+D+ G + +V R+
Sbjct: 364 PIGHIGEIVHRSSHIMLGYFKDEEKTRSAFQGG--WFHSGDLGSMDEEGYITVVDRKKDM 421
Query: 439 IKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQS 498
IK+GGENV E+E + QHP + + V+GI + E V A V +N +
Sbjct: 422 IKTGGENVASREIEEWIYQHPKVSEVAVIGIPHPYWIEAVTAIVV---------ANAGEE 472
Query: 499 SKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
+ +ELL Q C+ K L+ FK P+ FV+ P +GKI + E+RR+
Sbjct: 473 IETEELL-------QFCK-KGLSSFKVPK-FVVVTDQLPRNPSGKIVKRELRRQ 517
>gi|409359014|ref|ZP_11237371.1| fatty-acyl-CoA synthase [Dietzia alimentaria 72]
Length = 549
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 243/548 (44%), Gaps = 67/548 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R+++V + R T +F+ DV LA GL +G+RSGD V I + N W EW+L A
Sbjct: 44 DRDALVDVQAGRRWTYDEFLADVRRLASGLHRLGIRSGDRVGIWSPN-RW--EWVLVQYA 100
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWY---LELQHTAIPSLRWH 132
A IG I+ +N + E +T +L + DS Y L P+L
Sbjct: 101 TAEIGAILVNINPAYRVHELEFVLTQAEIKAVLAAPQFKDSDYTGMLAQVQPNCPNLELV 160
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V G + + D+ ++R+ P+ + I +TSGTTG PKG +S
Sbjct: 161 VLFGDEEWEAMVSG---PTDVEVLATIRA-----GLQPDDPINIQYTSGTTGFPKGATLS 212
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKS 250
H+ ++ + Y E+D P H G + +A G+ V P F+ ++
Sbjct: 213 HTNILNNGFFVGETIHYTENDRVCIPVPFYHCFGMVMGNLACTSHGSAMVIPAPAFDPEA 272
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
+L AVEQ TSL VP + +A L +++ + G P M++ +
Sbjct: 273 SLRAVEQETCTSLYGVPTMF--IAELALEDFDSYDLSTLRTGIMAGSPCPESTMRQVIDK 330
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS T T D +++ + VG+ P
Sbjct: 331 MNMDEVSICYGMTETSPVST-QTRSDDSMDR-------------------RVATVGRVGP 370
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV-WLDTGDIGSI 423
++E+K+ + G TRG VML YW++ AK + + E W+ TGDIG +
Sbjct: 371 NLEIKIVDPSTGETLPRGEAGEFCTRGYSVMLGYWNE-PAKTADAVDEAGWMRTGDIGVM 429
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G V + GR + GGEN+YP EVE L HP I+ V+G+ + + E ++A VR
Sbjct: 430 DDDGYVTITGRIKDMVIRGGENIYPREVEEFLYTHPDILDAQVIGVPDTKYGEELMAWVR 489
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+ L++E L + K L K PR +V FP+T TGK
Sbjct: 490 LKPGRD---------------DLTAEQLHEFATGK-LARHKIPR-YVHVVDEFPMTVTGK 532
Query: 544 IRRDEVRR 551
+R+ ++R
Sbjct: 533 VRKVDMRE 540
>gi|297203377|ref|ZP_06920774.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
gi|197711466|gb|EDY55500.1| dicarboxylate-CoA ligase PimA [Streptomyces sviceus ATCC 29083]
Length = 528
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 164/558 (29%), Positives = 237/558 (42%), Gaps = 93/558 (16%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R ++V + R T QF DV LA LL G+ GD V I A+N EW+L A
Sbjct: 31 EREALVDVPSGRRWTYAQFGADVDELASALLASGVAKGDRVGIWAVNCP---EWVLVQYA 87
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVML---VTDESSDSWYL------------EL 121
A IG I+ +N + E + +L ++ ++SD + E+
Sbjct: 88 TARIGAIMVNINPAYRTHEVEYVLNQAGISLLFASLSHKTSDYRAMVDEVRVRCRELREV 147
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+ PS W LG + D V+ L+ D + I +TSG
Sbjct: 148 VYIGDPS--WQALLGRAVPDAVHPE--LSCD-------------------DPINIQYTSG 184
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACH 240
TTG PKG +SH ++ ++ Y E D P H G+ +A GAC
Sbjct: 185 TTGFPKGATLSHHNILNNGYFVGELIAYSEQDRICIPVPFYHCFGMVMGNLAATSHGACM 244
Query: 241 VF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V P F+ + L AV+Q TSL VP + +A L S++ + G
Sbjct: 245 VIPAPSFDPAATLRAVQQEGCTSLYGVPTMF--IAELNLPDFATYDLSSLRTGIMAGSPC 302
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P E+MK A++ YGMTET S ++ T D LE H+
Sbjct: 303 PVEVMKRVVAEMHMAEVSICYGMTET-SPVSLQTRRDDDLE-----------------HR 344
Query: 360 PQGVCVGKPAPHVELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
VG+ PH+E+KV + G + TRG VML YW++
Sbjct: 345 TG--TVGRVLPHIEVKVVDPATGVTQPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDQGR 402
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ ++ + G V +VGR I GGEN+YP E+E L HP I + VVG+ + R
Sbjct: 403 WMHTGDLATMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGVPHER 462
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLW 532
E V+ACV R+ + E LR C E L +K P RL +L
Sbjct: 463 YGEEVLACVIPRDPADPP---------------TLEELRGFC-EGRLAHYKVPSRLKIL- 505
Query: 533 RKPFPLTSTGKIRRDEVR 550
FP+T +GK+R+ E+R
Sbjct: 506 -DAFPMTVSGKVRKVELR 522
>gi|397736506|ref|ZP_10503188.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
gi|396927696|gb|EJI94923.1| feruloyl-CoA synthetase [Rhodococcus sp. JVH1]
Length = 530
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 239/520 (45%), Gaps = 67/520 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA L G+ GD V + LN + E +LA+ +G I P+N+R + E + I
Sbjct: 55 LAGALSRRGVNFGDRVLLLTLNRTEFFEAVLAINALGAIAVPVNFRLTPPEVA-FIARDS 113
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
V E + + + +P L V++G+ + V + L ++ ++ LP
Sbjct: 114 GARAVFTEPALAPLVAAVRQDVPGLSLVVNIGADTEADVLGYEELVSEDGPAHAPVDLP- 172
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCH 223
+ +I +T+GTTG+PKG V+SHS ++ QS+ I + Y DD+ +P+ H
Sbjct: 173 -----EDTPSLILYTAGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDIGFLASPVFH 227
Query: 224 IGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLI 277
+ L S MLM+G V P F L+ EQ +T++ VP A+ AD
Sbjct: 228 VAALGSVAPMLMLGGTTVIHPLKAFNPTEMLDVWEQERITTVFLVPVQWQAVCAD----- 282
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
T +GRD ++++ G S+ +++ ++FP+A +++ +G TE S +T + D
Sbjct: 283 ---PTVRGRDLALRVISWGAAPASDTVLRAMADTFPRALIVAVFGQTEMSP-ITCVLDGD 338
Query: 337 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRG 391
+ G VGKP P ++ +V D + V G I+ RG
Sbjct: 339 DAIRKLG--------------------SVGKPIPTIQTRVVDDDMNDVAPGTVGEIVYRG 378
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
+ML YW A G W +GD+ DD G V++V R+ I SGGEN+Y EV
Sbjct: 379 PTMMLEYWQNPAATADAFAGG-WFHSGDLVRQDDEGFVYVVDRKKDMIISGGENIYCAEV 437
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL HP I VVG + + TE+ VA V L D+ S L+ E L
Sbjct: 438 ENVLFGHPRIREAAVVGRPDPKWTEVPVAVVALD----------DEGSD-----LAVEEL 482
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K L +K P+ V+ P ++GK+ + E+R+
Sbjct: 483 AAWLDDK-LARYKHPKDVVI-VDALPRNASGKVVKGELRK 520
>gi|374705636|ref|ZP_09712506.1| AMP-binding domain protein [Pseudomonas sp. S9]
Length = 556
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 255/565 (45%), Gaps = 70/565 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
+R++++ + + +Q +V AR + +G+ +GD + I A N + A A
Sbjct: 33 ERDALIVVHQQLRYSWRQLAAEVNRAARAFMALGIEAGDRLGIWAPNCAQWCISQFASAK 92
Query: 80 IGGIVAPLNYRWSFKEASRAI---------------TSIRPVML--VTDESSDSWYLELQ 122
+G ++ +N + E A+ TS ML + E + S +L
Sbjct: 93 VGAVLVNINPAYRCSELEYALKQSGCKWLVCADAFKTSDYHAMLAELLPELASSSPGQLA 152
Query: 123 HTAIPSLRWHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFT-HSWAPEGAVIICFT 179
+ +P LR +SL + + F++ R++ A+ + L + T H E A+ I +T
Sbjct: 153 SSRLPELRGVISLADQAPAGFLHWRELAELAETVNAEQLAARQATLHC---EQAINIQYT 209
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 238
SGTTG+PKG +SH ++ +G E D + PL H G+ + + G+
Sbjct: 210 SGTTGAPKGATLSHFNILNNGYMVGESLGLSEHDRMVIPVPLYHCFGMVMGNLGCVTHGS 269
Query: 239 CHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
++ FE +++L+AV Q T L VP + +A L + S++ + G
Sbjct: 270 TMIYPCAGFEPEASLQAVAQERATVLYGVPTMF--IAELDHPRLKAFDLSSLRTGIMAGA 327
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+M+ +++ AYGMTETS ++ T D LE VT
Sbjct: 328 TCPIEVMRRVIKELHMSEVQIAYGMTETSP-VSLQTAADDALEV---------RVTS--- 374
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
VG+ P +E K+ + + G + TRG VML YW+ A E
Sbjct: 375 -------VGRTQPQLESKIIDEQGAIVSRGQTGELCTRGYSVMLGYWNNPQASAEAIDTE 427
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD+ +D+ G V +VGR I GGEN+YP E+E L H I + V+G+ ++
Sbjct: 428 GWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHAAIADVQVIGVPDS 487
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E + ++L S CD++ LR++C+ N+ FK PR +
Sbjct: 488 KYGEEIAVWIKLHPG-----SGCDENQ-----------LREYCK-ANIAYFKVPRYYRFV 530
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHL 557
+ FP+T TGKI++ +R + ++ L
Sbjct: 531 DE-FPMTVTGKIQKFRMREQTIAEL 554
>gi|115350155|ref|YP_771994.1| AMP-binding domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280143|gb|ABI85660.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 575
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 157/553 (28%), Positives = 248/553 (44%), Gaps = 72/553 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++FVQ+V LA GL +G+ GD V I + N SEW L A A IG ++ +N +
Sbjct: 60 TWREFVQEVDVLAAGLAALGIVKGDCVGIWSPNRSEWLLTQ-FATARIGAVLVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ + S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCKAVIAAERFKTSAYVEMLQTIAPELASATPGDLRAARVPSLRTVVSM 178
Query: 136 GS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
G + + D++ D L L ++ T A + I FTSGTTGSPKG ++
Sbjct: 179 GDVAPAGMFRFADVMARGRDTLDVARLDAIGAT--LAATDPINIQFTSGTTGSPKGATLA 236
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKS 250
H ++ + + + E D PL H G+ A +A + GA VF + F+ +
Sbjct: 237 HRNVVNNARFIAMAMRFSEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVA 296
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV T+L VP + +A L + +++ + G P E MK +
Sbjct: 297 TLAAVADERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMKRVVSQ 354
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++ AYGMTETS P +F + T + + + + VG+ P
Sbjct: 355 MHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRIQP 394
Query: 371 HVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
H+E+K+ V G + T+G VML YWD AK + W+ TGD+ ++D
Sbjct: 395 HLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDD-AKTREVLVDGWMHTGDLATLDA 453
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +VGR + GGENVYP E+E L +HP I V G+ +A+ E + A + LR
Sbjct: 454 DGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLR 513
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
Q SE + +R C + +K PR ++ + P+T TGK++
Sbjct: 514 ADEQMSEDD----------------VRAFC-NGQIAHYKIPR-YIRFVDELPMTVTGKVQ 555
Query: 546 RDEVRREVMSHLK 558
+ +R ++ LK
Sbjct: 556 KFVMRERMIEELK 568
>gi|83719308|ref|YP_443798.1| AMP-binding domain-containing protein [Burkholderia thailandensis
E264]
gi|167620972|ref|ZP_02389603.1| acyl-CoA synthetase [Burkholderia thailandensis Bt4]
gi|83653133|gb|ABC37196.1| AMP-binding enzyme domain protein [Burkholderia thailandensis E264]
Length = 576
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 249/551 (45%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDVLATALIELGVARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y+E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYIEMISEIAPELATTPADGMLHAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G+++ + ++ D+L R + + I FTSGTTGSPKG ++H
Sbjct: 179 MGAAAPAGMLSFADVLARGRAALDPARLDAIGAALDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSA 251
++ + + +++ E D PL H G+ S +A + VGA VF + FE +
Sbjct: 239 HNVVNNACSIASVMRLTEVDAMCIPVPLYHCFGMVLSVLACVSVGAKMVFPGEAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSSTTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ + + E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDPKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ LR+ CR + +K PR +V + P+T TGK+++
Sbjct: 516 GETMTDDE----------------LREFCR-GQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|302528169|ref|ZP_07280511.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
gi|302437064|gb|EFL08880.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
Length = 501
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 187/391 (47%), Gaps = 62/391 (15%)
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
+P+ +I +TSGTTG PKG ++H L + + G +DV L PL H+ GLS
Sbjct: 157 SPDDTAVILYTSGTTGRPKGAELTHFQLFMNCTVSGELFGATAEDVSLAVLPLFHVFGLS 216
Query: 229 SAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 287
S + M G V +PKF++ + L+ +E+H T VP + L +++ GRD
Sbjct: 217 SVLNVMTRFGGSLVLVPKFDAAAVLDEMERHRCTLFSGVPTMYVAL-----LQQDLAGRD 271
Query: 288 --SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQL 345
S++ ++GG +P E+++ F ++ YG++ET+S TF
Sbjct: 272 LSSLRSAVSGGASMPGEVLRAFEKKFDGVVVLEGYGLSETASGTTF-------------- 317
Query: 346 PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRY 398
N+ S Q + + +GKP VE+KV G VG I+ RG +VM Y
Sbjct: 318 -----NI---SAEQRKVLSIGKPIWGVEVKVVDRAGTELGAGPDQVGEIVVRGHNVMKGY 369
Query: 399 WDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
+ +P + + W TGD+G D+ G ++V R + GG NVYP E+E VL
Sbjct: 370 Y----GRPDATAEAIRDGWFHTGDLGYRDEEGYYFVVDRLKDLVIRGGYNVYPREIEEVL 425
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
+HPG+ VVG + RL E VVA V LR S+++ D+ L +HC
Sbjct: 426 YEHPGVAEAAVVGEPHERLGEEVVAYVVLRAG---SDASVDE-------------LAEHC 469
Query: 516 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ + L +K PR L + P TGKI +
Sbjct: 470 KGR-LAAYKYPRTITLLDR-LPKGPTGKILK 498
>gi|374607539|ref|ZP_09680340.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373555375|gb|EHP81945.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 1055
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 153/548 (27%), Positives = 236/548 (43%), Gaps = 57/548 (10%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
++V +TG R T + +V +AR L+ G++ GD V I A N + A A IG
Sbjct: 551 EALVDVTGGRRWTYAELNAEVDCVARALMASGIQCGDRVGIWAPNCPEWTILQYATAKIG 610
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAI---PSLRWHVSLGS 137
I+ +N + E + + +LV+ S S Y + + P + V LGS
Sbjct: 611 AILVAINPAYRTHELAYVLRQSGTRLLVSATSFKTSDYRGMVSEVLSETPDVSEVVFLGS 670
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
+ + R AD + +LRS AP + I +TSGTTGSPKG +SH ++
Sbjct: 671 EDWNRLRDR----ADQVSPAALRSR--MDGLAPGDPINIQYTSGTTGSPKGATLSHRNIL 724
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAV 255
++ G + P H G+ + IP F+ LEA+
Sbjct: 725 NNGFFVTELIKLGPGERLCIPVPFYHCFGMVMGNLGCTTHGATMVIPAAGFDPAVTLEAI 784
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
E+ T+L VP + +A L K + S++ + G P ELMK + ++
Sbjct: 785 EKERCTALYGVPTMF--IAMLGHPKLGQRDLSSLRTGIMAGATCPMELMKRCVDELNMSE 842
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
L AYGMTETS ++ TL D L+ + VG+ PHVE++
Sbjct: 843 LAIAYGMTETSP-VSCQTLIDDDLDR-------------------RTATVGRAHPHVEIR 882
Query: 376 VCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
+ + G TRG VML YW+ + W+ TGD+ + D G
Sbjct: 883 IVDPDTGKTVKRGEPGEFCTRGYSVMLGYWNDDDRTREAVDADGWMHTGDLAVMRDDGYC 942
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
++GR + GGENVYP EVE L HP I V+G+ + + E + A +R+R
Sbjct: 943 MVIGRIKDMVIRGGENVYPREVEEFLHTHPDIDDAQVIGVPDEKYGEEICAWIRMR---- 998
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+ L ++ +R K L +K PR +V FP+T TGK+R+ ++
Sbjct: 999 -----------SGRTPLDADAVRAFASGK-LAHYKIPR-YVRVVDEFPMTVTGKVRKVDM 1045
Query: 550 RREVMSHL 557
R E + L
Sbjct: 1046 RTETVRLL 1053
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 239/552 (43%), Gaps = 63/552 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ L R A V+ + V + R T + V LA L G+ GD VA+ NS
Sbjct: 16 LSDVLRRHARVRPDRVAFVDPQRRCTFSEMDDRVTRLANALSARGVGRGDRVAVLGYNSI 75
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
+E A +G I P+N+R E + + + V +VTD + + +E PS
Sbjct: 76 ELVESWFAALRLGAIAVPVNFRMVADEIAYVLANSAAVAVVTDIAL-APAVEQARANAPS 134
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+ +++G + ++ D + D+ A E I +TSGTTG PKG
Sbjct: 135 VDIVLTIGGDLDEIIDAADTVAVDV-------------DIADEAPAFIMYTSGTTGFPKG 181
Query: 189 VVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 245
V++H L + + + IA +GY +DD ++ APL H G+S + M + G V P
Sbjct: 182 AVLTHRNLYLHAYSSIATLGYRDDDDCWMAVAPLFHTAGVSGMLPMFLNGGTAVIPPSGG 241
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + ++ + VTS PA + L ++ R ++++ G + L++
Sbjct: 242 FDPAAIVDTIVDEHVTSCWMTPAQWQTVCALPDLQSRDLSR--LRRVWWGAAPASTALLR 299
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
++F A++I+A+G TE S +T + + + G V
Sbjct: 300 SMIDAFGHAEIIAAFGQTE-CSPITCLLRGEDAIRKIGS--------------------V 338
Query: 366 GKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G P +VE ++ D VG I+ G VM YW++ G W +GD+
Sbjct: 339 GTPMLNVETRIVDDQMNDVAKGEVGEIVYLGPLVMKEYWEKEAETAEAFRGG-WFHSGDL 397
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
D G +++V R+ I SGGEN+Y EVE L + + ++G+ + + E +A
Sbjct: 398 VRQDSDGYIYVVDRKKDMIISGGENIYCAEVENALATCAKVAEVAIIGVPDPKWGETPMA 457
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V R+ D + ++ + HCR+ +L +K PR + P +
Sbjct: 458 VVVPRDP-------ADPPTDDE--------IEAHCRQ-HLARYKHPRRLAIV-DALPRNA 500
Query: 541 TGKIRRDEVRRE 552
+GK+ + +R+E
Sbjct: 501 SGKVLKTRLRQE 512
>gi|167582832|ref|ZP_02375706.1| acyl-CoA synthetase [Burkholderia thailandensis TXDOH]
Length = 576
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 249/551 (45%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDVLATALIELGVARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y+E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYIEMISEIAPELATTPADGTLHAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G+++ + ++ D+L R + + I FTSGTTGSPKG ++H
Sbjct: 179 MGAAAPAGMLSFADVLARGRAALDPARLDAIGAALDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSA 251
++ + + +++ E D PL H G+ S +A + VGA VF + FE +
Sbjct: 239 HNVVNNACSIASVMRLTEVDAMCIPVPLYHCFGMVLSVLACVSVGAKMVFPGEAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSSTTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ + + E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDPKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ LR+ CR + +K PR +V + P+T TGK+++
Sbjct: 516 GETMTDDE----------------LREFCR-GQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|430806989|ref|ZP_19434104.1| long-chain-fatty-acid--CoA ligase [Cupriavidus sp. HMR-1]
gi|429500723|gb|EKZ99082.1| long-chain-fatty-acid--CoA ligase [Cupriavidus sp. HMR-1]
Length = 525
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 238/555 (42%), Gaps = 59/555 (10%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A + + A + ++ R T F + +A+ LL G+++GD +A N
Sbjct: 7 ATLPSAIRHFARERAGAIAYAFEGRETTFADFDRHTDRVAQALLADGVKAGDRIAYVGKN 66
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
S+ Y E A +G ++AP+++R + E ++ ++ S + L A+
Sbjct: 67 SDHYFELFFGAAKMGAVIAPVSWRLAGPEIQYIVSHCDATLVFVGPESSASVRNLL-PAL 125
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
P +R V++ D+ D A P H P V+ +TSGTTG P
Sbjct: 126 PLVRRAVAMEGGEPDWPTYTDWRDA-------CPDTPPAHEAKPADVVLQLYTSGTTGRP 178
Query: 187 KGVVISHSALIVQSLAKIAIVG------YGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
KGV++ H L S +I++ + +DDV L P+ HIGG + ++VG
Sbjct: 179 KGVMLMHRNLT--SGTEISLREGADWSLWNDDDVSLVAMPVAHIGGSGWGVRGVLVGCKG 236
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
V +F+ L+ +E ++ L VPA M + R ++ R +K +L G +P
Sbjct: 237 VVAREFDPGKVLDYIEHDRISKLFMVPAAMQIVLRDPRARQVDYSR--LKHMLYGSSPIP 294
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+ L++E F + YGMTET+ ++ + P TP +P+
Sbjct: 295 AALLREGMAVF-GCGFVQQYGMTETTGTIVALP---PEDHTPADVPRMR----------- 339
Query: 361 QGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
GK P E+ V DG + VG ++ R M YW Q + WL
Sbjct: 340 ---AAGKAMPGSEVAVVGPDGQRLAAGEVGEVVIRSPQNMAGYWKQEEETARTIDADGWL 396
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD G +D G +++ R I SGGEN+YP EVE+ + HP + + V+G+ + R
Sbjct: 397 RSGDAGYMDADGYLYIHDRVKDMIISGGENIYPAEVESAIYGHPAVADVAVIGVPDERWG 456
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A V LR + ++ + RE+ + GFK P+ + +
Sbjct: 457 EAVKAMVVLRPG----------------VAADADSILGWARER-IAGFKVPK-SIDFIDA 498
Query: 536 FPLTSTGKIRRDEVR 550
P +GK+ R +R
Sbjct: 499 MPRNPSGKLLRRALR 513
>gi|187927421|ref|YP_001897908.1| AMP-binding domain-containing protein [Ralstonia pickettii 12J]
gi|309779879|ref|ZP_07674633.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|404385126|ref|ZP_10985515.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
gi|187724311|gb|ACD25476.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12J]
gi|308921238|gb|EFP66881.1| AMP-binding enzyme [Ralstonia sp. 5_7_47FAA]
gi|348616549|gb|EGY66049.1| hypothetical protein HMPREF0989_01315 [Ralstonia sp. 5_2_56FAA]
Length = 571
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 155/572 (27%), Positives = 252/572 (44%), Gaps = 87/572 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+VV N T + F + V LA GL +G GD + I + N +EW+L A A
Sbjct: 45 EAVVFREQNVRWTWRTFAEQVDALAAGLHALGFERGDRIGIWSPNR---VEWVLTQFATA 101
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHT------------- 124
+G I+ +N + E A+ + +V E+ S YLE+ T
Sbjct: 102 RLGLILVNINPAYRLSELEYALNKVGCKAIVAAEAFKTSRYLEMLQTLAPELATAQPGAL 161
Query: 125 ---AIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV 174
+P+LRW + +G + + D V + + D L T + +P+ A+
Sbjct: 162 NAAKLPALRWVIRMGEAGTPGMLNFADVVARGKSVPVDALDA-------ITATLSPDDAI 214
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAM 233
I FTSGTTG+PKG ++H ++ + + E D PL H G+ S +
Sbjct: 215 NIQFTSGTTGAPKGATLTHVNVVNNARFVAMAMNLQEGDRLCIPVPLYHCFGMVMSVLTC 274
Query: 234 LMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
GAC VF + F+ + L V + T L VP + +A L +++
Sbjct: 275 TATGACMVFPGEAFDPLATLRTVAEERCTQLHGVPTMF--IAQLDHPDFKSFDVSTLRGG 332
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P E+MK + ++ AYGMTETS P +F +
Sbjct: 333 IMAGSPCPIEVMKRVVSELNLREVTIAYGMTETS-------------------PVSFQSA 373
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 406
+ + + + VG+ PH+++K+ DG+ V G + T+G VML YWD AK
Sbjct: 374 VTDPLDK-RVTTVGRIQPHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKT 430
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ S + W+ TGD+ + D G +VGR + GGENVYP E+E L +HP + + V
Sbjct: 431 AESIHDGWMRTGDLATFDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNV 490
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
G+ + + E V A + L+ Q +E E +R C + + +K P
Sbjct: 491 FGVPDPKYGEEVCAWIVLKPGQQATE----------------EEIRTFC-QGQIAHYKIP 533
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
R ++ + P+T TGK+++ +R ++ LK
Sbjct: 534 R-YIRFVTEMPMTVTGKVQKFVMRDRMVEELK 564
>gi|257057367|ref|YP_003135199.1| AMP-binding domain-containing protein [Saccharomonospora viridis
DSM 43017]
gi|256587239|gb|ACU98372.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora viridis DSM 43017]
Length = 552
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 233/550 (42%), Gaps = 57/550 (10%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
R+++V R ++FV DV LA GLL G+ GD V I A N + A A
Sbjct: 37 DRDALVDYASGRRWNYREFVADVDALALGLLYRGVTKGDRVGIWAPNCPQWTLTQYATAK 96
Query: 80 IGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTA---IPSLRWHVSL 135
IG I+ +N + E + ++ E S Y + H PSL V L
Sbjct: 97 IGAILVNINPAYREHELEYVLNQAGISTLIAASEFKTSDYAGMIHKVRPRCPSLTDVVFL 156
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
D D+L K R + + + + I +TSGTTG PKG +SH
Sbjct: 157 DGDHWD-----DLLDTG-RKADPERLARAQAALSADDPINIQYTSGTTGFPKGATLSHHN 210
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSALE 253
++ + Y E D P H G+ +A GAC V P F+ L
Sbjct: 211 ILNNGFFVGELCRYTEVDRICLPVPFYHCFGMVMGNLAATTHGACMVIPAPSFDPAKTLA 270
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AV+ TSL VP + +A L S++ + G P E+MK+
Sbjct: 271 AVQAERCTSLYGVPTMF--IAELAEPDFDSYDLSSLRTGIMAGSPCPVEVMKQVIERMGM 328
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ YGMTETS ++ T D ++E + VG+ PH+E
Sbjct: 329 TEVSICYGMTETSP-VSMQTRVDDSIER-------------------RVSTVGRVGPHLE 368
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
K+ + G + TRG VML YW+Q V W+ TGD+ +D+ G
Sbjct: 369 AKIIDPETGLTVPRGTHGELCTRGYSVMLGYWEQPDKTAEVIDEARWMHTGDLAVMDEDG 428
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V + GR + GEN+YP E+E L HP I+ V+G+ + R E ++A VR+RE
Sbjct: 429 YVNITGRLKDMVIRDGENIYPREIEEFLYTHPDILDAQVIGVPDERYGEELMAWVRMREG 488
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ L++E LR+ C K L +K PR +V FP+T TGK+R+
Sbjct: 489 AE---------------PLTAESLREFCTGK-LAHYKIPR-YVHVVDEFPMTVTGKVRKV 531
Query: 548 EVRREVMSHL 557
E+R+ + L
Sbjct: 532 EMRKRAVELL 541
>gi|377822092|ref|YP_004978463.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
gi|357936927|gb|AET90486.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
Length = 576
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 251/566 (44%), Gaps = 72/566 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R +VV N T ++F +V LA GLL +G+++GD V I + N +EW+L A
Sbjct: 48 RPAVVFREQNIRWTWREFAHEVDVLASGLLALGIQAGDRVGIWSPNR---IEWLLTQFAT 104
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLE---------------- 120
A +G ++ +N + E A+ + ++ ++ S YLE
Sbjct: 105 ARMGAVMVNINPAYRLAELEYALNKVGCKAIIAAEQFKTSKYLEMLQALAPELAGAEPNA 164
Query: 121 LQHTAIPSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
L +P LR + +G + +N +++ + + +AP+ A+ I FT
Sbjct: 165 LHAAKLPELRAVIRMGEGKTPGMLNFDEVMHTGRAQEDKTKLDALEAKFAPDDAINIQFT 224
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
SGTTG+PKG ++H ++ + + E D PL H G+ A+ + C
Sbjct: 225 SGTTGNPKGATLTHRNIVNNARYIAMAMRLTEQDSLCIPVPLYHCFGMVLAVLACVSTGC 284
Query: 240 HVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
+ P F+ + L AV + T+L VP + +A L ++ + G
Sbjct: 285 AMVFPGEAFDPGATLAAVHEERCTALHGVPTMF--IAELDHPDFAKYDLSRLRTGIMAGS 342
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E MK ++ +++ AYGMTETS P +F + T + +
Sbjct: 343 PCPIETMKRVVSTMHLSEITIAYGMTETS-------------------PVSFQSSTTDPL 383
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 412
+ + VG+ PH+E+K+ V G + TRG VM YWD AK + +
Sbjct: 384 DK-RTTTVGRIQPHLEVKIVDPLGKIVPVGETGELCTRGYSVMKGYWDD-EAKTREAIVD 441
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD+ ++D G +VGR + GGEN+YP E+E L +HP + + V G+ +
Sbjct: 442 GWMHTGDLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKVQSVQVFGVPDQ 501
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A + +R Q SE E +R+ C + + +K PR ++ +
Sbjct: 502 KYGEEVCAWIVVRPGEQASE----------------EEIREFC-QGQIAHYKIPR-YIRF 543
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHLK 558
P+T TGK ++ +R ++ LK
Sbjct: 544 VDELPMTVTGKAQKFVMRARMIDELK 569
>gi|375139821|ref|YP_005000470.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820442|gb|AEV73255.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 541
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 244/555 (43%), Gaps = 71/555 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+++V + R T Q D+ +ARGL+ +G+ +G+ V I A N EW + A A
Sbjct: 33 DALVDMASGRRWTYAQLNNDIDVVARGLMALGIHTGERVGIWAPNCP---EWTIVQYATA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSW--YLELQHTAIPSLRWHVS 134
IG I+ +N + E + + + IR ++ T + + ++ + P LR +
Sbjct: 90 KIGAILVNINPAYRTHELAYVLKQSGIRTLISATSFRTSDYVSMIDEVRSETPELREVLY 149
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
LG+ + R A+ + LR+ S + + I +TSGTTG PKG +SH
Sbjct: 150 LGTDDWRDLQHR----AESVSDGELRTR--LTSLTNDQPINIQYTSGTTGFPKGATLSHR 203
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL------SSAMAMLMVGACHVFIPKFES 248
++ ++ +G DD P H G+ ++ + MV + P F+
Sbjct: 204 NILNNGYFTTELINFGPDDRLCIPVPFYHCFGMVMGNLGCTSHGVTMV----IPAPAFDP 259
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
L+A+E+ T + VP + +A L + + S++ + G P E+MK
Sbjct: 260 ALTLDAIEKERCTGVYGVPTMF--IAMLGQPDLAQRDLSSLRTGIMAGSVCPVEVMKRCV 317
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
N ++ AYGMTETS ++ TL D LE + +G+
Sbjct: 318 NDMNMTEVAIAYGMTETSP-VSCQTLIDDDLER-------------------RTGSIGRA 357
Query: 369 APHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PHVE+K+ + + G TRG VML YW+ E W+ TGD+
Sbjct: 358 HPHVEIKIVDPDTGDIVERGQTGEFCTRGYSVMLGYWEDRAKTDEAIDPEGWMHTGDLAV 417
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+ D G +VGR + GGEN+YP E+E L HP + V+G+ + + E V A V
Sbjct: 418 MRDDGYCNVVGRIKDMVIRGGENIYPREIEEFLYTHPDVDDAQVIGVPDEKYGEEVCAWV 477
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
R+ K L ++ LR +K L +K PR +V FP+T TG
Sbjct: 478 RM---------------KPGRTPLDAQALRDFASDK-LAHYKIPR-YVHVVDEFPMTVTG 520
Query: 543 KIRRDEVRREVMSHL 557
K+R+ ++R + + L
Sbjct: 521 KVRKVDMRADTVRLL 535
>gi|311068394|ref|YP_003973317.1| AMP-binding protein [Bacillus atrophaeus 1942]
gi|419823695|ref|ZP_14347237.1| AMP-binding domain protein [Bacillus atrophaeus C89]
gi|310868911|gb|ADP32386.1| AMP-binding domain protein [Bacillus atrophaeus 1942]
gi|388472185|gb|EIM08966.1| AMP-binding domain protein [Bacillus atrophaeus C89]
Length = 548
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 251/566 (44%), Gaps = 66/566 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV N T QF + A+GL+++G++ GD VA+ A N +L A A I
Sbjct: 23 REAVVYPDRNLRYTYTQFNRLCRRTAKGLMKLGIKKGDHVAVWASNVPEWLTAQFAAAQI 82
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E + S +++ D + Y ++ + IP L+ S
Sbjct: 83 GAVLVTVNTNFQSAELDYLLKHSDASALILMDSYRGTSYADILNGLIPELKESEPGQLQS 142
Query: 140 SDFVNKRDML---------------TADILKGYSLRSLPF-THSWAPEGAVIICFTSGTT 183
F + +L A + K S L +S + + +TSGTT
Sbjct: 143 DRFPFLKTILFIGDKSPPGMYHWDDIATLSKTVSDTELDHRMNSLMSVDVINMQYTSGTT 202
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF 242
G PKGV++SH +I + + D P H G + +A + GA +
Sbjct: 203 GFPKGVMLSHFNIINNAANIAECMKLSSTDRMCIPVPFFHCFGCVLGVLACVSAGAAMIP 262
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+ +F+ + L AVEQ T+L VP + +A L ++ + G P E
Sbjct: 263 VQEFDPAAVLTAVEQEKCTALHGVPTMF--IAELHHKHFPSYDLSHLRTGIMAGSACPIE 320
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+MK ++ AYG TE S +T T D +L Q +
Sbjct: 321 VMKAVIERMGMKEITIAYGQTEASPVIT-QTRADDSL-------------------QRRV 360
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+K+ G+S G + TRG HVM Y+ A S + WL
Sbjct: 361 ETVGRALPHIEVKIVQPGTSREVARGVQGELCTRGYHVMKGYYKDPEATASAIDADGWLH 420
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D+ G + GR + GGEN+YP E+E +L QHP ++ + VVG+ +A+ E
Sbjct: 421 TGDLAVMDEQGYCRITGRLKDMLIRGGENIYPREIEELLYQHPKVLDVQVVGVPDAKFGE 480
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
A V+L+E Q++ S E L+ +C+ K + K PR ++++ +
Sbjct: 481 EAAAWVKLKEG---------QTA-------SPEELQAYCKGK-IARHKIPR-YIVFTNEY 522
Query: 537 PLTSTGKIRRDEVRREVMS--HLKSL 560
P+T++GKI++ ++R + + HL S
Sbjct: 523 PMTASGKIQKFKLREKAIQQFHLSSF 548
>gi|419954341|ref|ZP_14470480.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
gi|387968892|gb|EIK53178.1| AMP-binding domain protein [Pseudomonas stutzeri TS44]
Length = 560
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 244/558 (43%), Gaps = 70/558 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVA 78
+R ++V T + + V ARGLL +GL++G+ V I S N++W + A A
Sbjct: 33 QREALVVRHQQLRYTWAELAEAVERCARGLLALGLQAGERVGIWSPNNAQWCITQ-FATA 91
Query: 79 FIGGIVAPLNYRWSFKEASRAI---------------TSIRPVML--VTDESSDSWYLEL 121
IG ++ +N + E A+ TS ML + E + L
Sbjct: 92 KIGVVLVNINPAYRLSELEYALKQSGCRWLICADAFKTSDYHAMLHELLPELESAAVGAL 151
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLT--ADILKGYSLRSLPFTHSWAPEGAVIICFT 179
Q +P LR +SL D + + L A+ + LR + + + I +T
Sbjct: 152 QSHMLPELRGVISLCDKPVDGMLQWQALMEMAEQVGPEQLRQCGERLQF--DDPINIQYT 209
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
SGTTG PKG +SH ++ +G E D + PL H G+ +
Sbjct: 210 SGTTGFPKGATLSHYNILNNGYMVGESLGLSEHDRLVIPVPLYHCFGMVMGNLGCVTHGT 269
Query: 240 HVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
+ P FE +AL+AV + T L VP + +A L ++ S++ + G
Sbjct: 270 TMIYPSAAFEPLAALQAVAEERATGLYGVPTMF--IAMLDHPERRSLDLGSLRTGIMAGA 327
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+MK + ++ AYGMTETS T T D LE VT
Sbjct: 328 TCPIEVMKRVIDEMHMNEVQIAYGMTETSPVST-QTRADDDLER---------RVT---- 373
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
VG+ PH+E K+ + + +G + TRG VML YW+ A G
Sbjct: 374 ------SVGRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATREAIDGA 427
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD+ +DD G V +VGR I GGENVYP EVE L HP + + V+G+ ++
Sbjct: 428 RWMHTGDLAVMDDEGYVKIVGRNKDMIIRGGENVYPREVEEFLFTHPAVADVQVIGVPDS 487
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E +VA V+L Q + +E LR+ C+ + + FK PR + +
Sbjct: 488 KFGEEIVAWVKLHPGHQ----------------VEAEALREFCKGR-IAHFKTPR-HIRF 529
Query: 533 RKPFPLTSTGKIRRDEVR 550
FP+T +GK+++ +R
Sbjct: 530 VDDFPMTISGKVQKFRMR 547
>gi|433655259|ref|YP_007298967.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|433293448|gb|AGB19270.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 563
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 237/531 (44%), Gaps = 52/531 (9%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SI 103
LA+GLL IG++ GD +AI A N ++ + A A IG + P+N + E + S
Sbjct: 64 LAKGLLNIGIKKGDHIAIWASNVPEWVITLFATAKIGCPIVPMNTEYRENELQYVLKQSD 123
Query: 104 RPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKG---YSLR 160
+++ D D Y+ + IPSL+ S++F N + ++ YS
Sbjct: 124 AKALILIDGYKDLDYVRTIYNLIPSLQKTDKENLHSNEFPNLKYVINIGEKCNPGMYSFN 183
Query: 161 SL-------------PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 207
+ +S P+ + I +TSGTT PKG +++H L+ +
Sbjct: 184 EILMMGEQYDDDMVYEIQNSLKPDEVIDIQYTSGTTDFPKGAMLTHYGLLNNGDTIATRM 243
Query: 208 GYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITV 266
+ E+D T PL H G + S MA L GA V + F +EA+++ T+ V
Sbjct: 244 KFTENDKLCITVPLFHCFGYTLSVMACLSKGATMVLVDHFNPVKVMEAIDKEKCTAFNGV 303
Query: 267 PAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
P + + K +++ + G P ++M+ + ++ S YG+TE S
Sbjct: 304 PTMFITMLNHQDFDKF--DFSTLRTGIMAGSVCPKKVMEAVVDKMNMREITSVYGLTEAS 361
Query: 327 SSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR 386
+T T D +LE G V P GV + P LK GS G
Sbjct: 362 PGIT-QTSVDDSLE---DRVSTVGYVFP-------GVDIKIVDPKT-LKEVPIGSE--GE 407
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
I+ RG +VM Y+ + WL TGDIG +DD G + + GR I GGEN+
Sbjct: 408 IMARGYNVMKGYYKMKEETEKAIEKDGWLHTGDIGKLDDRGYLKITGRLKDMIIRGGENI 467
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
P E+E L HPG+ + +VG+ + + E ++A + +E + C +
Sbjct: 468 SPTEIEECLYHHPGVKDVQIVGVPDEKYGEEIMAYIIPKEGY------C----------I 511
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+E +R++ R+K L FK P+ +V FP T++GKI++ +R M+ L
Sbjct: 512 EAEDIREYARKK-LARFKVPK-YVKIIDEFPKTASGKIQKYRLREMAMAEL 560
>gi|332662713|ref|YP_004445501.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332331527|gb|AEE48628.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 567
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 155/560 (27%), Positives = 248/560 (44%), Gaps = 87/560 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGIVAPLNYRWS 92
T QF V + A+ L +G++ GD V I + N EW + A A IG I+ +N +
Sbjct: 48 TYHQFKAVVDDCAQAFLTLGVQKGDRVGIWSPNRYEWTVTQ-FATAKIGAILVNINPSYR 106
Query: 93 FKEASRAITSIRPVMLVTDES------SDSWY-----LE------LQHTAIPSLRWHVSL 135
E A+ LV+ ++ +D Y LE L +P LR + L
Sbjct: 107 LHELEYALKQSECSTLVSADTFKTSRFTDMLYALAPELEDCPKGHLNAIKVPQLRTLICL 166
Query: 136 GSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
DF+ + T + L SL F + A+ I +TSGTTG PKG
Sbjct: 167 SEDDHPGMWRWDDFLQESSKSTPEALAARQ-SSLAF------DEAINIQYTSGTTGFPKG 219
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPK-F 246
+SH ++ ++ + E D + PL H G + + + GA V+ + F
Sbjct: 220 ATLSHHNILNNGYFVAELMNFTEKDRLVIPVPLYHCFGMVMGNLGCVTHGATMVYPSEGF 279
Query: 247 ESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
++ S L AVE+ T + VP + DL + T S++ + G P E+
Sbjct: 280 DAASTLAAVEREKATGIFGVPTMFIAELDLPNFDQYDLT-----SLRTGIMAGSPCPIEV 334
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
MK+ + +++ AYGMTETS T + P + Q
Sbjct: 335 MKKVQSLMHVSEMEIAYGMTETSPVSTQTRVGTPL--------------------EKQVS 374
Query: 364 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
VG+ PH+E+K+ + G + TRG VML YW+ A + W+ T
Sbjct: 375 TVGQIHPHLEVKIIDPETGRTVPRGIPGELCTRGYSVMLGYWNNETATRNAIDKARWMHT 434
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ ++D+ G V +VGR I GGEN+YP E+E L HP I + V+G+ +A+ E
Sbjct: 435 GDLATMDEEGYVKIVGRIKDMIIRGGENIYPREIEEFLYTHPKISDVQVIGVPDAKYVEA 494
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V+A +R++E L+ E ++ +C + + +K P+ +V + FP
Sbjct: 495 VMAWIRVKEGET----------------LTVEEVQAYC-QGQIAHYKIPQ-YVRFTDGFP 536
Query: 538 LTSTGKIRRDEVRREVMSHL 557
+T TGKIR+ E+R + ++ L
Sbjct: 537 MTVTGKIRKVEMREQSIAEL 556
>gi|407274853|ref|ZP_11103323.1| AMP-binding domain protein [Rhodococcus sp. P14]
Length = 552
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 163/551 (29%), Positives = 239/551 (43%), Gaps = 70/551 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R+++V R T + +V LA GLL G+ GD V I A N EW+ A
Sbjct: 40 RDALVDRAAGRRWTYTELAGEVDALAFGLLRAGIGKGDRVGIWAPNCA---EWVFVQYAT 96
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHV 133
A IG I+ +N + E +T MLV ++SD + ++ P L V
Sbjct: 97 AKIGAILVNINPAYRSHELQYVLTQAGIRMLVAAPRFKTSDYAAMIDEVRGNCPDLEQVV 156
Query: 134 SLGSSSSDFVNK--RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
LGS D + + R L D R + + + I +TSGTTG PKG +
Sbjct: 157 LLGSPDWDELGESGRAALADD-----RTRLDAAQRDLSADDPINIQYTSGTTGFPKGATL 211
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESK 249
SH ++ + Y E D P H G+ +A GA V P F+
Sbjct: 212 SHHNILNNGFFVGELCHYTEQDKVCIPVPFYHCFGMVMGNLACTSHGATMVIPGPAFDPA 271
Query: 250 SALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKE 306
L AV + TSL VP + +A+LA + G D S++ + G P E+MK+
Sbjct: 272 QTLAAVAEERCTSLYGVPTMFIAELA-----DPGFDGFDLSSLRTGIMAGSPCPVEVMKQ 326
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A++ YGMTETS ++ T D T++ + VG
Sbjct: 327 VIERMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVSTVG 366
Query: 367 KPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+K+ + G + TRG VML YW+Q W+ TGDI
Sbjct: 367 RVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWNQPDKTADAIDAARWMHTGDI 426
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +D G V + GR + GGEN+YP E+E L HP I+ VVG+ + + E ++
Sbjct: 427 GVMDADGYVSVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVPDQKYGEELMV 486
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+R+RE L ++ LR++C K L +K PR +V FP+T
Sbjct: 487 WIRMREG---------------AAPLDAQSLREYCTGK-LAHYKIPR-YVHVVDEFPMTV 529
Query: 541 TGKIRRDEVRR 551
TGKIR+ E+R
Sbjct: 530 TGKIRKVEMRE 540
>gi|312136259|ref|YP_004003596.1| amp-dependent synthetase and ligase [Methanothermus fervidus DSM
2088]
gi|311223978|gb|ADP76834.1| AMP-dependent synthetase and ligase [Methanothermus fervidus DSM
2088]
Length = 552
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 248/576 (43%), Gaps = 82/576 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
++ +V N T ++F + V LA+GLL +GL+ GD + I A N +L + A + I
Sbjct: 22 KDFIVYPDRNLRFTYKEFNERVDLLAKGLLHMGLKKGDHIGIWATNVPDWLTFFFAASKI 81
Query: 81 GGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSS 138
GG++ +N + E + + ++ + L+ + D YL+ + +P L+ +
Sbjct: 82 GGVLVTINTAYKKDELKYVMKQSDMKAIALI-EGFRDVNYLKTIYELVPELKKYERGKLK 140
Query: 139 SSDFVNKRDMLT--ADILKG-YSLRSLPFTHSWAPE-------------GAVIICFTSGT 182
S +F + ++ A+ +G Y+ L P+ V I +TSGT
Sbjct: 141 SKNFPKLKHVIYIGAEKHRGMYNTHELMLLGKHVPDEKLEKAKKQVKNDDVVNIQYTSGT 200
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHV 241
TG PKGV+++H ++ + E D P+ H G+ +A+L G V
Sbjct: 201 TGFPKGVMLTHRNILNNGYYIGERQKFTEKDKLCLPVPMFHCFGIVLGLLAILTHGGTLV 260
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAI--------MADLATLIRVKKTWKGRDSVKKIL 293
+ F+ L AVE+ T+L VP + M D+ L S++ +
Sbjct: 261 MLEYFDPLLVLAAVEKEKCTALYGVPTMFISELSHPMFDMFDL----------SSLRTGI 310
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P ELMK+ ++ YG+TE S +T ++ DP
Sbjct: 311 MAGAPCPKELMKKVIEKMHMKEITIVYGLTEASPGITQTSVDDPI--------------- 355
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPS 407
+ VGKP P +E+K+ G VG I RG +VM Y+
Sbjct: 356 -----DKRVETVGKPLPEIEVKIVDPKTGKKLGPGEVGEICCRGYNVMKGYYKMPKETKE 410
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
+ WL TGD+ +D G +VGR I GGEN+YP E+E L + PGI + +V
Sbjct: 411 AIDEDGWLHTGDLAMMDKDGYYRIVGRIKEMIIRGGENIYPREIEEFLHKMPGIKDVQIV 470
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E V A V + E + +K +N+ +KAP+
Sbjct: 471 GVPDEKYGEEVAAFVIKEDGADIREEDVIDYAK-----------------ENIARYKAPK 513
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLPSN 563
+V + FPLT++GK+++ ++R+ L+ +N
Sbjct: 514 -YVFFVDKFPLTASGKVQKFKLRKIATEMLEKRKNN 548
>gi|300705200|ref|YP_003746803.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
gi|299072864|emb|CBJ44220.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CFBP2957]
Length = 571
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 258/547 (47%), Gaps = 83/547 (15%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAIT 101
LA GL +GL+ GD + I + N EW+L A A +G I+ +N + E A+
Sbjct: 68 LAAGLHALGLQRGDRIGIWSPNR---YEWVLTQFATARLGLILVNINPAYRLAELEYALN 124
Query: 102 SIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSSSS-DFV 143
+ +V E+ S YLE LQ +P+LRW + +G ++ +
Sbjct: 125 KVGCKAIVAAEAFKTSRYLEMLQTLAPELATAQPGALQAAKLPALRWVIRMGEGATPGMI 184
Query: 144 NKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS-L 201
N +++ +G S +L T + +P+ A+ I FTSGTTG+PKG ++H ++ +
Sbjct: 185 NFGEVIARG--QGVSTDTLDAITAALSPDDAINIQFTSGTTGAPKGATLTHVNVVNNARF 242
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESKSALEAVEQHC 259
+A+ G D + + PL H G+ S +A GAC VF + F+ + L V +
Sbjct: 243 VAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTATGACMVFPGEAFDPLATLRTVAEER 301
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLI 317
T+L VP + +A L + ++G D S++ + G P E+MK ++
Sbjct: 302 CTALHGVPTMF--IAQLDHPE--FRGFDVSSLRGGIMAGSPCPIEVMKRVVAEMHLREIT 357
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYGMTETS P +F + + + + + VG+ PH+++K+
Sbjct: 358 IAYGMTETS-------------------PVSFQSAVTDPLDK-RVTTVGRIQPHLQVKLV 397
Query: 378 SDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
DG+ V G + T+G VML YWD AK + S + W+ TGD+ + D G +
Sbjct: 398 -DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESIHDGWMRTGDLATFDADGYCNI 455
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
VGR + GGENVYP E+E L +HP + + V G+ + + E V A + L+ Q +
Sbjct: 456 VGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQAT 515
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
E E +R C + + +K PR ++ + P+T TGK+++ +R
Sbjct: 516 E----------------EEIRAFC-QGQIAHYKIPR-YIRFVPEMPMTVTGKVQKFIMRE 557
Query: 552 EVMSHLK 558
++ LK
Sbjct: 558 RMIEELK 564
>gi|433635586|ref|YP_007269213.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
gi|432167179|emb|CCK64690.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070017]
Length = 547
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 241/563 (42%), Gaps = 85/563 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R + + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 REALVDVVARRRFNYSELLTDVHRLATGLVRAGIGPGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--------- 127
A IG I+ +N + +E A+ M++ S D+ Y + P
Sbjct: 99 AEIGAILVTINPAYRVREVEYALRQSGVAMVIAVASFKDADYAAMLAEVGPRCPDLADVI 158
Query: 128 ---SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
S RW +L + D + TA L G V I +TSGTT
Sbjct: 159 LLESDRWD-ALAGAEPDLPALQQ--TAATLNG--------------SDPVNIQYTSGTTA 201
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF- 242
PKGV +SH ++ ++GY D P H G + +A GA V
Sbjct: 202 YPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIP 261
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
P F+ + L AV+ TSL VP + +A L T S++ + G P E
Sbjct: 262 APGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVE 319
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ + + YGMTETS P + +SV + G
Sbjct: 320 VMRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVG 360
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+KV + VG TRG VM YW+ V + W+
Sbjct: 361 T-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMH 419
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 420 TGDLAEMDQSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGE 479
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKP 535
++A V+LR N L+ E LR++C + + FK PR LW
Sbjct: 480 ELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDE 521
Query: 536 FPLTSTGKIRRDEVRREVMSHLK 558
FP+T TGK+R+ E+R++ + +L+
Sbjct: 522 FPMTVTGKVRKVEMRQQALEYLR 544
>gi|374985715|ref|YP_004961210.1| AMP-binding protein [Streptomyces bingchenggensis BCW-1]
gi|297156367|gb|ADI06079.1| AMP-binding domain protein [Streptomyces bingchenggensis BCW-1]
Length = 575
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 248/560 (44%), Gaps = 65/560 (11%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A + + R A R ++V + R T +F + V +A GL+ G+ GD V I A+N
Sbjct: 39 ASLAGAIERFA--DREALVDLPTGRRWTYAEFGRSVEEVALGLMAKGVGKGDRVGIWAVN 96
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWY---L 119
EW+L A A IG I+ +N E + + V++ + E S Y +
Sbjct: 97 CA---EWVLVQYATARIGAIMVNINPASRVHELTFVLRQAGISVLISSTEHKTSNYRRMV 153
Query: 120 ELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
E + P+LR + +G + D + A++ + R + + V I +T
Sbjct: 154 EQVRSECPALRDVIYIGDRTWDGLLH---AGANVSRE---RLIEREARLTCDDPVNIQYT 207
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGA 238
SGTTG PKG +SH ++ + +GY + D P H G+ + + GA
Sbjct: 208 SGTTGFPKGATLSHHNILNNGYSVGETLGYTQQDRVCLPVPFSHCFGMVTGNLGATSHGA 267
Query: 239 CHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
C V P F+ + L AVEQ TSL VP + +A L S++ + G
Sbjct: 268 CIVIPAPTFDPAATLRAVEQERCTSLYGVPTMF--IAELGLPDFDSYDLSSLRTGIIAGS 325
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+++ + A++ YGMTETS T D G
Sbjct: 326 TCPVEVLRRVVDEMHMAEVSIFYGMTETSPVSTQTRRDDDLRHRTGT------------- 372
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTG 411
VG+ PH+E+KV + G + TRG VML YW++ V G
Sbjct: 373 -------VGRVLPHLEIKVVDPLTGVTVPRGTRGELCTRGYSVMLGYWEEPERTAEVIDG 425
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD+ +D+ G V +VGR I GGE VYP E+E L HP I + VVG+ +
Sbjct: 426 GRWMHTGDLAIMDEDGYVRIVGRIKDMIIRGGEKVYPREIEEFLYTHPKIADVQVVGVPD 485
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
+ E ++ACV LRE + L+ + L + CR + L +KAPR ++
Sbjct: 486 EKYGEEILACVILREGAKS---------------LTRDELARFCRGR-LAHYKAPR-YLR 528
Query: 532 WRKPFPLTSTGKIRRDEVRR 551
FP+T +GK+R+ E+R+
Sbjct: 529 VMDAFPMTVSGKVRKVELRQ 548
>gi|451821697|ref|YP_007457898.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451787676|gb|AGF58644.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 525
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 139/554 (25%), Positives = 265/554 (47%), Gaps = 64/554 (11%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+I + ++ A + ++V + R T ++ +++ +++ L+ IG++ GD VA+ A N
Sbjct: 10 TYITRVFNKFA--DKEALVYVEDGRRFTYEKLSKEIDLISKSLISIGIKKGDHVALLACN 67
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
S ++ LA+ IG + LNY + +E + + +L+ + ++L+
Sbjct: 68 SPEWIIVFLAILKIGAVCVCLNYSSTEEEIDYMLKQSQSTILIVSDKDMIEKVDLKK--F 125
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
L+ + + + + ++ + + K + ++ + I +TSGTTG+P
Sbjct: 126 DYLKITLKMKT-----LFNLGLIMSQMKKALEDELIAVYNNVSVNDMATILYTSGTTGNP 180
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI-GGLSSAMAMLMVGACHVFIPK 245
KG++ +HSA++ L+ + Y +D L T PL HI GG SA+ L+ G+ V + K
Sbjct: 181 KGIMFTHSAVLNGPLSFLENFKYTSEDTILVTLPLNHILGGKYSAILGLLAGSKIVLMKK 240
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F++ AL+A+E T VP + L T D S++ + G L
Sbjct: 241 FKTSVALKAIESERCTGFHGVPTMYQYLLT------NCDSYDISSLRVGMIAGAVSAKTL 294
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
MK+ ++L + +G TET +T T+YD + P+
Sbjct: 295 MKDIMEKLSISELNNTFGQTETLG-VTQTTVYDK--------------------NDPKIN 333
Query: 364 CVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
VGKP HVE+K+C+ + + G + + + M+ Y++ +A + + W+ T
Sbjct: 334 TVGKPVKHVEIKICNPETKEILPKNSEGELYVKSPYSMVGYYNNPIATNATIVDD-WIRT 392
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ ID+ G + + GR I GGEN+ P ++E L++HP I ++VG+ + L E
Sbjct: 393 GDLAFIDEDGYLSIKGRLKDVIIRGGENISPVDIENHLIKHPEIENAIIVGVPDEILGEE 452
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+ A +++ ++ SS KE ++++ C + ++ K P+ ++ FP
Sbjct: 453 IFAFIKINKT----------SSLTKE-----DIIKFLCGK--ISKCKIPK-YIESIDSFP 494
Query: 538 LTSTGKIRRDEVRR 551
LTSTGKIRR+ +++
Sbjct: 495 LTSTGKIRRNLLKQ 508
>gi|392392571|ref|YP_006429173.1| acyl-CoA synthetase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390523649|gb|AFL99379.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 522
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/559 (25%), Positives = 257/559 (45%), Gaps = 81/559 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+ + + + T Q+ V LA L++G+ GD + NS +E A+A IG
Sbjct: 19 DKIALVCKDERLTYQELNCRVNALAHAFLDLGIGKGDKIGYLFPNSIEIVELFFAIAKIG 78
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD 141
I PLN+R +E + S+ + V D E++ + +++ + LG +
Sbjct: 79 AIAVPLNHRLVSREIKCLLDSVECDVFVYSRLYDGPVSEVK-GSFRTVKHIIRLGEPAPG 137
Query: 142 FVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVI------ICFTSGTTGSPKGVVISHS 194
YS L + ++ P+ AV I FT GTTG KGV+ +H
Sbjct: 138 --------------EYSFEKLLEYGNTSEPDIAVDRRDLFRIQFTGGTTGRSKGVMRTHE 183
Query: 195 ALIVQSLAKIA--IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSAL 252
A + Q++ + +G D+V L +PL H GG++ + ++ GA V F+ L
Sbjct: 184 ADLFQTIGVMTSNKMGASSDEVVLTQSPLHHQGGITWMLCVMATGAQFVICDGFDPVEIL 243
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD----SVKKILNGGGGLPSELMKEAT 308
+++ VT ++ +P +T +R+ D SVK + GG ++++
Sbjct: 244 RQIQKERVTYMLLLPP-----STYLRLIDAPAFGDYDVSSVKVVHTSAGGTSPAIVQKMV 298
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV-CVGK 367
+FP ++ +G TET + T++ T E ++H P+ VG+
Sbjct: 299 EAFPNCEVYYGWGQTETGAG----TVHRITREM--------------ALHHPEKTQSVGR 340
Query: 368 PAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQ-FLAKPSVSTGEVWLDTGDIG 421
P P +L++ + VG + +G + Y+ Q L +++ G W TGD+
Sbjct: 341 PMPFFQLRIVDEAGKDVPQGEVGEGIAKGPAIFSGYYKQPELTDETIADG--WTRTGDMM 398
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
D+ G ++V R+ IK+GGENV+ +EVEAV+ +HP ++ V+G+ + E V+A
Sbjct: 399 RQDEEGLYYMVDRKKDMIKTGGENVFAQEVEAVIRKHPAVLDCSVIGVPDKTFGEAVMAV 458
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
++LR + ++E +++HC+ ++L+ +K PR +V + FP+ S
Sbjct: 459 IKLRAGYT----------------AAAEDIQEHCK-RDLSSYKKPR-YVEFLDEFPVDSA 500
Query: 542 GKIRRDEVR---REVMSHL 557
GKI++ +R R + HL
Sbjct: 501 GKIQKFRLRKKYRGIYGHL 519
>gi|47568327|ref|ZP_00239029.1| fadD13 [Bacillus cereus G9241]
gi|47555020|gb|EAL13369.1| fadD13 [Bacillus cereus G9241]
Length = 496
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 245/557 (43%), Gaps = 75/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGL--RSGDIVAISALN 66
I + + A + + + IT T +Q + + +N L GL + G+ +AI + N
Sbjct: 4 IAYWIEKRAYLHPDRIAIITDEEEMTYKQ-LHEYVNKVAAYLMYGLHVQKGERIAILSQN 62
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
S Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 63 SLEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTLLFVEETFQNMALSMQKVSY 122
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ +++ LK R + + IIC+TSGTTG P
Sbjct: 123 V------------------QSVISIKSLKEIEDRKIDNFEEINESASFIICYTSGTTGKP 164
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK 245
KG V++ + +L + D + PL HIGG+ A L G + K
Sbjct: 165 KGAVLTQDNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRK 224
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
FE +AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+
Sbjct: 225 FEPTTALSMIEKHKVTVVMGVPTIHQALVNCEKFETT--NLQSVRWFYNGGAPCPEELMR 282
Query: 306 EATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
E N + L +GMTETS ++ ++ D +
Sbjct: 283 EFIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS--------------------- 318
Query: 365 VGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTG 418
+GKP + + + + VG +L RG +VM YW++ A K ++ G WL TG
Sbjct: 319 IGKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKETIQDG--WLYTG 376
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG
Sbjct: 377 DLARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG---------- 426
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
R+ +W E+ K +L+ + + +HCR L +K P+ +++ K P
Sbjct: 427 ------RQHVKWGETPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIPKE-IIFLKELPK 478
Query: 539 TSTGKIRRDEVRREVMS 555
+TGKI++ ++ ++ S
Sbjct: 479 NATGKIQKVQLANQLKS 495
>gi|323527839|ref|YP_004229992.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
gi|323384841|gb|ADX56932.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1001]
Length = 576
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 267/590 (45%), Gaps = 86/590 (14%)
Query: 5 SQAHICQCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
SQA I + L A R +VV T ++F ++V LA G L +G+ GD V I
Sbjct: 30 SQATIGEFLRETAGRFPDRPAVVFREQQIRWTWKEFAEEVDVLAAGFLALGIAKGDRVGI 89
Query: 63 SALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWY 118
+ N +EW+L A A IG ++ +N + E A+ + +V E S Y
Sbjct: 90 WSPNR---IEWLLTQFATARIGAVLVNINPAYRLAELEYALNKVGCKAIVAAERFKTSMY 146
Query: 119 LE-LQHTA---------------IPSLRWHVSL------GSSSSDFVNKRDMLTADILKG 156
LE LQ A +P+LR+ + + G S V ++ T D+ +
Sbjct: 147 LEMLQQLAPELATQAPGQLRAARLPALRYVIRMCDTDTPGMLSFSDVIEQGRATLDVARL 206
Query: 157 YSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 216
+ + H A+ I FTSGTTG+PKG ++HS ++ + + E D
Sbjct: 207 DEIGNTLSCHE-----AINIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLNEHDALC 261
Query: 217 HTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLA 274
PL H G+ A +A + VGA VF + F+ + L AV + T+L VP + +A
Sbjct: 262 IPVPLYHCFGMVLAVLACVSVGANMVFPGEAFDPAATLAAVAEEQCTALHGVPTMF--IA 319
Query: 275 TLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
L ++ + G P E MK+ + +++ AYGMTETS
Sbjct: 320 ELDHPNFASYDLSRLRTGIMAGSPCPIETMKKVVSRMHLSEITIAYGMTETS-------- 371
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILT 389
P +F + T + + + + VG+ PH+E+K+ + V G + T
Sbjct: 372 -----------PVSFQSSTTDPLDK-RTTTVGRIQPHLEVKIIDPLGNIVPVGETGELCT 419
Query: 390 RGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG VM YW D+ + S+ G W+ TGD+ +ID G +VGR + GGEN+YP
Sbjct: 420 RGYSVMQGYWGDEEKTRESIVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENIYP 477
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E+E L +HP I + V G+ +A+ E V A V LR Q ++
Sbjct: 478 REIEEFLFRHPKIQSVQVFGVPDAKYGEEVCAWVVLRSGEQ----------------ATA 521
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
E ++Q C + + +K PR ++ + P+T TGK+++ +R +++ L+
Sbjct: 522 EEIQQFC-QGQIAHYKVPR-YIRFVDELPMTVTGKVQKFVMRERMINELR 569
>gi|359767449|ref|ZP_09271237.1| putative long-chain-fatty-acid--CoA ligase [Gordonia
polyisoprenivorans NBRC 16320]
gi|359315167|dbj|GAB24070.1| putative long-chain-fatty-acid--CoA ligase [Gordonia
polyisoprenivorans NBRC 16320]
Length = 526
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 248/558 (44%), Gaps = 66/558 (11%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
+ ++ L+R AA ++ + G R +F V LA LL G+ GD VA+++
Sbjct: 13 RVNVGDSLTRTAARSPRALAIVDGARRLDYSEFNSAVNRLAHSLLVHGIAVGDAVALASH 72
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA 125
NS +L A A IG + P+N W E++ + R +LV S + A
Sbjct: 73 NSAEFLICYYACAKIGAVCVPINLAWRPHESAYVLADSRARVLVVHTELASEMAQALDNA 132
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
++ V++G S F D T + S + P T + A+ +TSGTT
Sbjct: 133 -STIELIVTIGPSDVAF----DTPTTEWEAFTTGSAETDP-TVTIGDRAALTYLYTSGTT 186
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 242
+PKGVV +H+A+ ++S+ I G+ DD + P+ H L+ +MVGA
Sbjct: 187 SAPKGVVGNHTAIYLESMTMIIEGGFRPDDRFAALLPIFHTAQLNCHCTTAVMVGAAIFV 246
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+ F++++ L +EQ +T L +P M A L R + SV++ L +P +
Sbjct: 247 MRGFDAEALLTLIEQESITQLFGLP--MMYRAMLERADIRRRNLSSVRRALYAMAPMPQD 304
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+++E F +G TE S + T++ P N + P
Sbjct: 305 ILEECIEVF-DCDFYLLFGQTEMSPT---ATIFRPE----------------NQLTHPGA 344
Query: 363 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV---- 413
VG P +V++++ D + G I+ RG H+M Y L KP T E
Sbjct: 345 --VGTPVINVQVEIHDDAGRALPTGTDGEIVYRGPHLMTEY----LGKPD-DTDEAFRHG 397
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE-AVLLQHPGIIGIVVVGIANA 472
W +GD+G D G +W R IK+GGENV EVE A+ P + VVVG+ +A
Sbjct: 398 WFHSGDVGHFDSDGILWFTDRHKDVIKTGGENVSSLEVEKAMYSAEPAVAEAVVVGLPHA 457
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+E + A V + + E++ E LRQH L +K P+ V+
Sbjct: 458 HWSEAITAFVVGKPGLRLDENDI------------REKLRQH-----LDAYKIPKAIVVV 500
Query: 533 RKPFPLTSTGKIRRDEVR 550
+ P T+TGKIR++E+R
Sbjct: 501 DE-LPKTATGKIRKNEIR 517
>gi|218780924|ref|YP_002432242.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218762308|gb|ACL04774.1| Long-chain-fatty-acid CoA ligase (AMP-forming) [Desulfatibacillum
alkenivorans AK-01]
Length = 505
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 153/554 (27%), Positives = 238/554 (42%), Gaps = 58/554 (10%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
Q ++ L+ A + N + + T Q A L + GD +A+
Sbjct: 2 QTNLGHILANRAFLSPNLEACVGADYRYTYAQENARANRFASALKANDFKKGDRIAVLCK 61
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA 125
N+E + ++ A +G + A LN+R + E + + ML+ D++ EL+
Sbjct: 62 NNEHIICALMGAAKMGVVAAILNWRLTAPELEYILNNCGADMLIYDDAFAPVVDELKGN- 120
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
IP+ R VS F +D D L S P + + VI+ +TSGTTG
Sbjct: 121 IPA-RLFVS------KFAKGKDQDFEDFLAQGSEEE-PSIEAGGDDPCVIM-YTSGTTGK 171
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK 245
PKG +ISH+ SL + +G + YL APL HIGGLS A + G VF+P
Sbjct: 172 PKGAMISHNNAFWASLGLTHTLPWGYKERYLLVAPLFHIGGLSPVFANIHKGLTTVFMPD 231
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + ++ + ++TVP ++ +A + S+ + G +P L+
Sbjct: 232 FDPVGMYKTIQDERINFMMTVPLMLMAMAMVPPDVVEKFDLSSLNFFVCGASPVPPSLIH 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
K+ YG TE + ++TF T + + +
Sbjct: 292 LYNEK--GFKIAQVYGATEYTGAITFWT---------------------HEIGMDKCASA 328
Query: 366 GKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
GKP H ++KVC GS VG + G V L YW+ A TG + +GD
Sbjct: 329 GKPVFHGQVKVCKPGSDEEVPAGEVGELCLFGPQVFLGYWNNPKASEEALTGGCY-RSGD 387
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+G ID+ G V+++ R I SGGEN+YP E+E VL HP + V G + + E+ V
Sbjct: 388 LGRIDEDGCVYVIDRLKDMIISGGENIYPAEIEQVLQSHPAVAEAAVTGRPDEKWGEIPV 447
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V +R +E E + Q CR+ NL GFK + V + + P
Sbjct: 448 AHVAVRPGETITE----------------EDILQVCRD-NLAGFKRVKE-VHFVEALPKN 489
Query: 540 STGKIRRDEVRREV 553
STGKI + +R E+
Sbjct: 490 STGKILKTVLREEL 503
>gi|407980554|ref|ZP_11161337.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
gi|407412687|gb|EKF34460.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. HYC-10]
Length = 544
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 144/550 (26%), Positives = 246/550 (44%), Gaps = 68/550 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
+ F ++V +GL+ G++ GD +AI A N +L A A IG ++ +N + +E
Sbjct: 37 EAFYREVKETGKGLMAFGVQKGDHIAIMAPNVPEWLILQFACASIGAVLVTVNTNFQSQE 96
Query: 96 ASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLR--WHVSLGSS------SSDFVNKR 146
+ + S ++ + D ++ Y+ + IP L+ H + S+ S ++ +R
Sbjct: 97 LAYLLKHSDSKMLFIVDGFKETSYVNMLEELIPELQTAHHGEITSAQYPYLKSCVYIGQR 156
Query: 147 ---DMLTADILKGYSLRSLPFTHSW-------APEGAVIICFTSGTTGSPKGVVISHSAL 196
M + D L+ + R+ H W P+ + + +TSGTTG PKGV++SH+ +
Sbjct: 157 VPNGMRSWDSLQVAAKRTK--EHEWENRMDELVPDDVMNMQYTSGTTGYPKGVMLSHTNI 214
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
+ + + E D P H G + +A L G + + F + L+ V
Sbjct: 215 VCNASQIADCMKLTEQDRMCIPVPFFHCFGSVLGVLACLTKGGTIIPLESFHPERVLQTV 274
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
E+ T L VP + +A L +++ + G PS +MK +
Sbjct: 275 EKEKCTVLHGVPTMF--IAELDHPNFHSYDLSTLRTGIMAGSLCPSHVMKAVIEKMGLRE 332
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
L AYG TE+S +T T D + E Q VG+ P +E+K
Sbjct: 333 LTIAYGQTESSPVIT-QTRTDDSFERRVQ-------------------TVGRALPQIEVK 372
Query: 376 VCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
+ G+S G + TRG HVM Y+ A V + WL TGD+ +D G V
Sbjct: 373 IVLPGTSEEVPRGEQGELCTRGYHVMKGYYKNEEATNEVIDEDGWLHTGDLAEMDQDGYV 432
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+ GR I GGENVYP+E+E VL HP I+ VVGI + E A +RL++
Sbjct: 433 KITGRLKDMIIRGGENVYPKEIEDVLYTHPAILDAQVVGIPDETYGEEAAAFIRLKQGQ- 491
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+S + L +C+ + + +K P+ F + + +P+T++GKI++ +
Sbjct: 492 ---------------TVSIDKLTSYCQSQ-MARYKIPKYFFITDE-YPMTASGKIQKFRL 534
Query: 550 RREVMSHLKS 559
+++ + +K
Sbjct: 535 KKQALDLIKE 544
>gi|407715183|ref|YP_006835748.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
gi|407237367|gb|AFT87566.1| fatty-acyl-CoA synthase [Burkholderia phenoliruptrix BR3459a]
Length = 576
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 166/590 (28%), Positives = 266/590 (45%), Gaps = 86/590 (14%)
Query: 5 SQAHICQCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
SQA I + L A R +VV T ++F ++V LA G L +G+ GD V I
Sbjct: 30 SQATIGEFLRETAGRFPDRPAVVFREQQIRWTWKEFAEEVDVLAAGFLALGIAKGDRVGI 89
Query: 63 SALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWY 118
+ N +EW+L A A IG ++ +N + E A+ + +V E S Y
Sbjct: 90 WSPNR---IEWLLTQFATARIGAVLVNINPAYRLAELEYALNKVGCKAIVAAERFKTSMY 146
Query: 119 LE-LQHTA---------------IPSLRWHVSL------GSSSSDFVNKRDMLTADILKG 156
LE LQ A +P+LR+ + + G S V ++ T D+ +
Sbjct: 147 LEMLQQLAPELATQAPGQLRAARLPALRYVIRMCDTDTPGMLSFSDVIEQGRATLDVARL 206
Query: 157 YSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 216
+ + H A+ I FTSGTTG+PKG ++HS ++ + + E D
Sbjct: 207 DEIGNTLSCHE-----AINIQFTSGTTGNPKGATLTHSNVVNNARYIAMAMNLSEHDALC 261
Query: 217 HTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLA 274
PL H G+ A +A + VGA VF + F+ + L AV + T+L VP + +A
Sbjct: 262 IPVPLYHCFGMVLAVLACVSVGANMVFPGEAFDPAATLAAVAEEQCTALHGVPTMF--IA 319
Query: 275 TLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
L ++ + G P E MK+ + ++ AYGMTETS
Sbjct: 320 ELDHPNFASYDLSRLRTGIMAGSPCPIETMKKVVSRMHLGEITIAYGMTETS-------- 371
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILT 389
P +F + T + + + + VG+ PH+E+K+ + V G + T
Sbjct: 372 -----------PVSFQSSTTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCT 419
Query: 390 RGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG VM YW D+ + S+ G W+ TGD+ +ID G +VGR + GGEN+YP
Sbjct: 420 RGYSVMQGYWGDEEKTRESIVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENIYP 477
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E+E L +HP I + V G+ +A+ E V A V LR Q ++
Sbjct: 478 REIEEFLFRHPKIQSVQVFGVPDAKYGEEVCAWVVLRSGEQ----------------ATA 521
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
E ++Q C + + +K PR ++ + P+T TGK+++ +R +++ L+
Sbjct: 522 EEIQQFC-QGQIAHYKVPR-YIRFVDELPMTVTGKVQKFVMRERMINELR 569
>gi|390564775|ref|ZP_10245534.1| O-succinylbenzoic acid-CoA ligase [Nitrolancetus hollandicus Lb]
gi|390171990|emb|CCF84862.1| O-succinylbenzoic acid-CoA ligase [Nitrolancetus hollandicus Lb]
Length = 523
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 247/554 (44%), Gaps = 76/554 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I L AA + + G T + + V AR L +G+R GD VA NS
Sbjct: 14 IPDWLRHRAATSPDRPAILAGAERWTFDELDKRVSRTARRLAGLGVRPGDRVATLLRNSH 73
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
+E I AV IG ++ PLN+R + E + + + +LV+D + E H+
Sbjct: 74 QAVEVIHAVGRIGAVLVPLNFRLTAGEIAWQLADVNARLLVSDAYTAVLAGEAAHSLPKL 133
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
R +S S ++ +N L +P A + I +TSGTTG PKG
Sbjct: 134 ARAAISGESPDANPLNDAPEL-----------DVPLRERIALDDPHSIIYTSGTTGQPKG 182
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFES 248
V++S+ ++ +G +DD +L PL H+GGL+ M L+ G V F+
Sbjct: 183 VLLSYGNHWWSAIGSALNLGTHQDDCWLACLPLFHVGGLAILMRSLICGIPAVIHESFDP 242
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR----DSVKKILNGGGGLPSELM 304
+ ++++ VT I++ ++T++R T +G +++ +L GGG P +L+
Sbjct: 243 AAVNRSIDEDGVT-------IISVVSTMLRRMLTARGERPYPPALRCVLLGGGPAPRDLL 295
Query: 305 KE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
A + P ++ YG+TET+S + + P + G+
Sbjct: 296 DTCARRAIP---VVQTYGLTETASQVATLA--------PADALRKLGSA----------- 333
Query: 364 CVGKPAPHVELKVCSDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLD 416
GKP E+++ DGS+ G IL RG V Y +P + + WL
Sbjct: 334 --GKPLFPNEVRIDRDGSALPPGEPGEILVRGPVVTRGY----AGRPDATARALRDGWLH 387
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+G +D G ++++ RR+ I +GGENVYP EVEA LL GI V+G+ + +
Sbjct: 388 TGDLGYLDPDGYLYVLDRRDDLIITGGENVYPAEVEAALLAQDGIEDAGVIGVPDPEWGQ 447
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
VVA VRL + L E +R CR + L G+K P + + +
Sbjct: 448 AVVAAVRLANG----------------ITLKEEQIRAACRAR-LAGYKVP-VQIRFIDTL 489
Query: 537 PLTSTGKIRRDEVR 550
P + GK+ R +R
Sbjct: 490 PRNAGGKLSRRALR 503
>gi|34497235|ref|NP_901450.1| AMP-binding protein [Chromobacterium violaceum ATCC 12472]
gi|34103091|gb|AAQ59454.1| probable long chain fatty-acid CoA ligase [Chromobacterium
violaceum ATCC 12472]
Length = 562
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 237/541 (43%), Gaps = 66/541 (12%)
Query: 42 VLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI 100
V +A GLL +GL +GD V I + N +EW L A A G ++ +N + E A+
Sbjct: 55 VDRVACGLLRLGLHAGDRVGIWSQNRAEWVL-MQFAAAKAGLVLVNINPGYRRAELEYAL 113
Query: 101 TSI--RPVML---------------VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFV 143
+ R ++L + E D ELQ +P+LRW + +G +
Sbjct: 114 NKVGCRALVLSPSFKSSDYVAMIRDLAPELDDCRPGELQSVRLPALRWVLRIGQQRLPGM 173
Query: 144 NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 203
L A+ + + A I FTSGTTG PKG +SH ++ +
Sbjct: 174 LAFSELLAEPSADELAALQALGAALRADEAANIQFTSGTTGHPKGATLSHRNILNNAWFV 233
Query: 204 IAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESKSALEAVEQHCVT 261
A + DD PL H G+ + L GA VF + F+ S LE V++ T
Sbjct: 234 GAAMRLEADDRLCIPVPLYHCFGMVMGTLCCLCRGAAMVFPGEGFDPLSVLETVQEERCT 293
Query: 262 SLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYG 321
+L VP + +A L + S++ + G P E+M+ + A++ YG
Sbjct: 294 ALHGVPTMF--IAMLDHPRFAEFDLSSLRTGIMAGSPCPVEVMRRVIDRMHMAEVTICYG 351
Query: 322 MTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS 381
MTETS P + + T + Q VG PHVELK+
Sbjct: 352 MTETS-------------------PVSLQSATDTPLEQRVST-VGSAHPHVELKIVDAEG 391
Query: 382 SHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
V G + RG VML YW+ + E W+ TGD+ S+ + G+V +VGR
Sbjct: 392 GVVPRGQSGELCVRGYSVMLGYWEDEAMTRAAIDAEGWMHTGDLASMREDGSVNIVGRVK 451
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
+ GGENVYP E+E L +HP I + V+G+ +AR E + A +RLR+ +E +
Sbjct: 452 DMVIRGGENVYPREIEEFLYRHPKIQDVQVIGVPDARYGEELCAWIRLRDGECATEED-- 509
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
+R C + + +K PR ++ + FP+T TGKI++ +RR ++
Sbjct: 510 --------------IRSFC-QGQIAHYKIPR-YIEFVDSFPMTVTGKIQKYLMRRTMVEK 553
Query: 557 L 557
L
Sbjct: 554 L 554
>gi|163789385|ref|ZP_02183824.1| putative acyl-CoA synthetase [Carnobacterium sp. AT7]
gi|159875239|gb|EDP69304.1| putative acyl-CoA synthetase [Carnobacterium sp. AT7]
Length = 503
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/517 (28%), Positives = 231/517 (44%), Gaps = 73/517 (14%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
NLA L + G+ GD VA+ A N Y + +LA IG I PLN+R E + +
Sbjct: 39 NLAHYLKKNGVTKGDRVALYAPNDISYFDVLLASIKIGAIFIPLNWRLKPIEIKKVVEDA 98
Query: 104 RPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 163
+P ++ S S L L A+ +SL S ++ +I + +P
Sbjct: 99 QP-KVILHASQISKRLSLVDAAL------LSLDVDSKEY--------NEICE--HPNHVP 141
Query: 164 F-THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 222
F + S E V++ +T+GTTG PKG +I+H+ ++ S+ I +D+ + +AP+
Sbjct: 142 FLSESIELESPVMLIYTTGTTGDPKGAIITHNGMVNNSMNTIISWNITHEDITIASAPMF 201
Query: 223 HIGGLSSAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 281
HI G+S + LM+ V I + F+ + E ++Q+ T L VP + L + K
Sbjct: 202 HIAGISGMIIPLMLIGGKVIIDRYFDGTNTNEMIKQYKPTMLFMVPTMYYGLISATNFHK 261
Query: 282 TWKGRDSVKKILNGGGGLPSELMKEATNSF--PKAKLISAYGMTETSSSLTFMTLYDPTL 339
SV + GG S +KE N F K LI++YG+TE
Sbjct: 262 --DNLASVHTFVAGG----SPPLKEVVNYFVSEKLPLINSYGLTEVG------------- 302
Query: 340 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHV 394
P F ++ ++ P +G P+ VE K+ +D V G +L G H
Sbjct: 303 ------PNNFKLMSETALQHP--FSIGYPSFFVEAKIVNDQDEEVEQGQIGELLLAGQHT 354
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
YW + G+ ++ TGD+ D+ G ++V R+ I +GGENV P EVE V
Sbjct: 355 FAGYWQKQEETAKAFLGD-FVRTGDLAKKDENGLFYIVDRKKEMIITGGENVLPSEVERV 413
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L HP + VVVG + R + V A + ++ + SE+ DQ +
Sbjct: 414 LNAHPAVKDSVVVGYEHPRYGQSVGAAIIFKDK-ERSEAELDQYMTD------------- 459
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
NL G+K P+ + L+ FP S GK + E+ R
Sbjct: 460 ----NLAGYKTPKHY-LFVDVFPTNSVGKTDKKEIIR 491
>gi|126179036|ref|YP_001047001.1| AMP-dependent synthetase/ligase [Methanoculleus marisnigri JR1]
gi|125861830|gb|ABN57019.1| AMP-dependent synthetase and ligase [Methanoculleus marisnigri JR1]
Length = 566
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 160/589 (27%), Positives = 261/589 (44%), Gaps = 93/589 (15%)
Query: 9 ICQCLSRIAAVKRNS--VVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L+RIA +S +V++ T +F++ V LAR L+ + + GD VAI ALN
Sbjct: 20 IGEMLNRIATEHPDSEALVSVHQGTRWTYAEFLERVDTLARALMALDVERGDRVAIWALN 79
Query: 67 SEWYLEWIL---AVAFIGGIVAPLN--YR-WSFKEASRAITSIRPVMLVTDESSDSWYLE 120
Y EW+L A A IG I+ +N YR + F+ A + S +L+ S Y+
Sbjct: 80 ---YAEWVLVQFATAKIGAIMVNINPAYRTYEFEYAMKQ--SEVQTLLIQGRFKTSDYVG 134
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT--HSWAP-------- 170
+ + + P + G +SD K L + G +P+ ++W
Sbjct: 135 MFYESCPEA-FEAKPGRINSD---KFPFLKNVVFLG----DIPYNGMYTWDDLLSKAELV 186
Query: 171 --------------EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 216
+ AV I +TSGTTG PKGVV++H ++ + + +D
Sbjct: 187 RPEELREREESLSFDDAVNIQYTSGTTGFPKGVVLTHHNILNNGFIIGEGMKFTHEDRLC 246
Query: 217 HTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLA 274
P H G+ S MA + GA V P F ++ L+AV+ T+L VP + +A
Sbjct: 247 IPVPFYHCFGMVLSNMASVTHGAAMVLPAPVFSPEAVLKAVQDEKCTALHGVPTMF--IA 304
Query: 275 TLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
L D+++ + G P+E+M+E ++++ YG TETS +T T
Sbjct: 305 ELSHPDFAKYRLDTLRTGIMAGSPCPTEVMREVNKKMNMSEIVIVYGQTETSPGVTMTTT 364
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRIL 388
DP + + +GKP PH E+K+ + + G I
Sbjct: 365 ADPL--------------------ERRVSTIGKPFPHTEIKIIDPNTQRIVPRGETGEIC 404
Query: 389 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG VM Y++ A + W TGD+G++D+ V +VGR + GGEN+YP
Sbjct: 405 ARGYCVMRCYYNNPNATRATIDESHWNHTGDLGTMDEEDYVKIVGRLKDMVIRGGENIYP 464
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E+E L HP + V+G+ + + E ++A ++ + N L
Sbjct: 465 REIEEYLHNHPKVADAYVIGVPDRKYGEELMAWIK---------------TDNGATLTED 509
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
EV ++ CR + + FK PR +V + FP+T +GKI + ++R + L
Sbjct: 510 EV-KEFCRGR-IAHFKIPR-YVKFVDDFPMTVSGKIMKFKMREMAIEEL 555
>gi|329937490|ref|ZP_08287048.1| O-succinylbenzoate-CoA ligase [Streptomyces griseoaurantiacus M045]
gi|329303366|gb|EGG47253.1| O-succinylbenzoate-CoA ligase [Streptomyces griseoaurantiacus M045]
Length = 512
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 227/526 (43%), Gaps = 52/526 (9%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNY 89
+ H T + + VL LA L +G+ GD VA N +LE + A +G + PLN
Sbjct: 27 DTHLTYRDLHERVLRLAHALRALGVARGDRVAYLGPNHPSFLETLFATGVLGAVFVPLNT 86
Query: 90 RWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
R + E + ++ +LV A R ++LG ++ + ++L
Sbjct: 87 RLAAPELAYNLSDSGSTVLVHAAGHAGTAAAAGAEAPALRR--ITLGPAAEGALGYEELL 144
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY 209
+ P P+ +I +TSGTTG PKG V+SH+ + S+ +
Sbjct: 145 A-------GAPADPLDEPVGPDEPCMIMYTSGTTGRPKGAVLSHANITWNSVNVLVDTDL 197
Query: 210 GEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA 268
D+V L APL H GL+ + + L+ G V F++ LEAV H VT + VP
Sbjct: 198 AGDEVTLVVAPLFHTAGLNMTCLPTLLKGGRVVLHGAFDAGHVLEAVAAHRVTYMFGVPT 257
Query: 269 IMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
+ +A R W+ D S++ + GG +P+ ++ T YGMTE S
Sbjct: 258 MYDAMAAHPR----WRDADLSSLRSVSCGGAPVPARTIE--TYLARGLAFSQGYGMTEAS 311
Query: 327 SSLTFMTLYDPTLET-PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVG 385
+ F+ + T + +P F T V P G G AP G
Sbjct: 312 PGVLFLDREEATAKAGSAGVPHFF---TDTRVTGPDG---GPAAP-----------GEKG 354
Query: 386 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 445
IL RG +VM YW + + T + WL TGD+ D+ G ++V R SGGEN
Sbjct: 355 EILVRGPNVMSGYWGRPADTAAAFTEDGWLRTGDVARTDEDGYAYIVDRVKDMFVSGGEN 414
Query: 446 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 505
VYP EVE LL HP + V+G+ +A E+ A V L E D + E+L
Sbjct: 415 VYPAEVEDALLGHPAVRECAVIGVPDAVWGEVGHAVVVL-------EPGADAGADGAEIL 467
Query: 506 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
R H R L +K PR V + P T++GKI + VRR
Sbjct: 468 -----GRLHGR---LAKYKIPRT-VAFVDALPRTASGKIVKSAVRR 504
>gi|330815048|ref|YP_004358753.1| AMP-binding protein [Burkholderia gladioli BSR3]
gi|327367441|gb|AEA58797.1| AMP-binding domain protein [Burkholderia gladioli BSR3]
Length = 588
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 248/556 (44%), Gaps = 82/556 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWS 92
++F +V LA L+E+G+ G+ V I A N +EW+L A A IG I+ +N +
Sbjct: 75 REFGDEVDALAAALIELGIAPGERVGIWAPNR---VEWLLTQFATARIGAILVNINPAYR 131
Query: 93 FKEASRAITSIRPVMLVT-DESSDSWYLELQHT----------------AIPSLRWHVSL 135
E A+ + MLV D S Y ++ T +P+LR VS+
Sbjct: 132 LAELEYALNLVGCKMLVAADSFKSSQYTQMLRTLAPELDDCAPGALHAARLPALRAVVSM 191
Query: 136 GSSSSDFVNKRDMLTADILK-GYSLRSLP----FTHSWAPEGAVIICFTSGTTGSPKGVV 190
+ + + D D+L G +LR A + I FTSGTTGSPKG
Sbjct: 192 SEAPPAGMLRFD----DVLAHGRTLREHAGLDVLGAGLADTDPINIQFTSGTTGSPKGAT 247
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFES 248
++H ++ + A ++ E D PL H G+ S +A + VGA VF F+
Sbjct: 248 LTHRNVVNNARAIARVMRLTEQDALCIPVPLYHCFGMVLSVLASVSVGAKMVFPGAAFDP 307
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
L AVE T+L VP + +A L + +++ + G P E MK
Sbjct: 308 LVTLAAVEAERCTALQGVPTMF--IAELDHPEFKRFDLGTLRTGIMAGSPCPIETMKRVV 365
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
A++ AYGMTETS ++F + D TLE + VG+
Sbjct: 366 AEMHMAEVTIAYGMTETSP-VSFQSTTDDTLEK-------------------RTTTVGRI 405
Query: 369 APHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGS 422
PH+E K+ + V G + TRG VM YW D+ L + ++ G W+ TGD+ +
Sbjct: 406 QPHLEAKIVDAEGAIVPVGATGELCTRGYAVMAGYWGDEALTRRAIVDG--WMHTGDLAT 463
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
D+ G +VGR + GGEN+YP E+E L +HP I V G+ + + E V A +
Sbjct: 464 FDEEGFCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDPKYGEEVCAWI 523
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
LR E E LR CR + + +K PR +V + + P+T TG
Sbjct: 524 VLRAGEAMDE----------------EELRDFCRGQ-IAHYKVPR-YVRFVEALPMTVTG 565
Query: 543 KIRRDEVRREVMSHLK 558
K+++ +R ++ L+
Sbjct: 566 KVQKFVMRDAMIDELR 581
>gi|453364097|dbj|GAC80184.1| putative fatty-acid--CoA ligase [Gordonia malaquae NBRC 108250]
Length = 548
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 244/546 (44%), Gaps = 68/546 (12%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAP 86
+R T ++F +DV LA GLL +G+ GD VA+ + N EW+L A A IG ++
Sbjct: 49 DRQWTYREFRRDVRALAAGLLRLGVNPGDRVALWSPNR---FEWVLTQFAAAEIGAVLVV 105
Query: 87 LNYRWSFKEASRAI-TSIRPVMLVTDESSDSWY---LELQHTAIPSLRWHVSLGSSSSDF 142
+N + E + + S V+L + DS Y L+ + LR V S F
Sbjct: 106 INPSYRRHELAYVLGQSGTTVVLAAERFRDSEYAVMLDDVRDQLSELRQVVLF--ESDGF 163
Query: 143 VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLA 202
TAD L + A+ I +TSGTTGSPKGV +SH+ +
Sbjct: 164 ATLLSEPTADELAAVD----EIASRLDADDAINIQYTSGTTGSPKGVTLSHTNIGNNGFL 219
Query: 203 KIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCV 260
+V Y E D P H G + +A + G+ V P F+ +AL AVE++
Sbjct: 220 VGELVNYTEADRICLPVPFYHCFGMVMGNLAAISHGSAMVIPGPAFDPATALAAVEKYGC 279
Query: 261 TSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLI 317
TSL VP + +A+LA L T D +++ + G P +M+ + A++
Sbjct: 280 TSLYGVPTMFIAELALL----DTGASYDLSTLRTGIMAGSPCPEAVMRRVIDEMNMAEVS 335
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
YGMTETS T T +L G V G+ PH+E+K+
Sbjct: 336 ICYGMTETSPVST-------QTRTDDELDLRVGTV-------------GRVGPHLEIKIV 375
Query: 378 SDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ V G TRG VM YW++ + W+ TGD+G + D G +
Sbjct: 376 DPVTREVLPRGETGEFCTRGYSVMQGYWNEPEKTADAIDADGWMRTGDLGVMGDDGYARI 435
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VR+R+
Sbjct: 436 TGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQVIGVPDEKYGEELMAWVRVRDGAA-- 493
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
L ++ +R+ +++ K PR +V + FP+T TGK+R+ E+R
Sbjct: 494 -------------PLDADAVREFA-TGHISRHKIPR-YVHVVEEFPMTVTGKVRKVEMRE 538
Query: 552 EVMSHL 557
+ + L
Sbjct: 539 KSIEFL 544
>gi|119472994|ref|ZP_01614829.1| acyl-CoA synthase [Alteromonadales bacterium TW-7]
gi|119444614|gb|EAW25925.1| acyl-CoA synthase [Alteromonadales bacterium TW-7]
Length = 577
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 255/564 (45%), Gaps = 70/564 (12%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIG 81
+VV N T ++F ++V LA GLL IG++ GD V I S N +W L A A IG
Sbjct: 53 AVVVNHQNIRLTYKEFQKEVNQLAMGLLAIGVKPGDRVGIWSPNNIQWCLTQ-FATAKIG 111
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I+ +N + E A+ S+ L+T + S Y+E+ ++ P L+ S S+
Sbjct: 112 AIMVCINPAYRPNELQYALNSVECSTLITASQFKGSNYIEMLNSLAPELKHCDSGKLSAK 171
Query: 141 DFVNKRDMLT------------ADILK----GYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
N ++++ +DI++ + L + E + I FTSGTTG
Sbjct: 172 ALPNLKNVIRIGNEVSAGMFSFSDIMRMATPAHELELNAIAANLNAEQDINIQFTSGTTG 231
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
+PKG ++H ++ +L + + E D PL H G+ + + P
Sbjct: 232 NPKGATLTHKNILNNALFVGDSMHFTEHDKLCIPVPLYHCFGMVLGSLLCVTKGAAAIYP 291
Query: 245 K--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
F++K+ L+ +EQ T+L VP + L T+ D S++ + G P
Sbjct: 292 SDSFDAKTTLDVIEQEGCTALHGVPTMFISQLEL----STFNEYDLRSLRTGVMAGSTCP 347
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
++M++ +++ AYG TE S + +T D ++E
Sbjct: 348 EQVMRKVQTQMNMHQVLIAYGQTE-CSPINNITETDSSIER------------------- 387
Query: 361 QGVCVGKPAPHVELKVCSD-GSSHV----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
Q VG+ H E+K+ + G+ G + ++G +M YW+ + + WL
Sbjct: 388 QVTTVGRALAHTEVKIIDELGNIQKIGLPGEVCSKGVGIMRCYWNDEEKTKATIDSDGWL 447
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD+G +D G V +VGR I GGENVYP E+E VL +PGI V GI++ +
Sbjct: 448 HSGDLGVMDSEGFVSIVGRIKDMIIRGGENVYPREIEEVLYTYPGIQDAAVFGISDEKYG 507
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A ++ +E + L + +R +K L FK PR ++ + +
Sbjct: 508 EEVCAWIQPKE----------------DTTLDEQAIRAFLHDK-LAYFKMPR-YIRFVES 549
Query: 536 FPLTSTGKIRRDEVRREVMSHLKS 559
+P+T TGK+++ ++R ++ L +
Sbjct: 550 YPMTVTGKLQKFKMREQMQEELSN 573
>gi|229103647|ref|ZP_04234328.1| AMP-dependent synthetase and ligase [Bacillus cereus Rock3-28]
gi|228679769|gb|EEL33965.1| AMP-dependent synthetase and ligase [Bacillus cereus Rock3-28]
Length = 522
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/534 (27%), Positives = 254/534 (47%), Gaps = 60/534 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q Q+V LA +G+ D +A+S N + A A +G I+ P N +
Sbjct: 36 RRITYKQLKQEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 95
Query: 91 WSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
+ E + + P +L+ + E ++ E +R +++ S ++ + ++
Sbjct: 96 YKSYEIEYILENSAPTLLIASGEFEKNFGFE---KVFNKVRKVITVRFSQENYCSYEQLM 152
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VG 208
++ + ++ + E I +TSGTTG+PKGV+++H A +VQS I I +
Sbjct: 153 RSETM------NIEPVNINVNEDLFCILYTSGTTGTPKGVMVTHRA-VVQSAQTIGIELH 205
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
++DV++ +APL HI G++ + + + +G + KF + L+ +EQ VT VP
Sbjct: 206 CTQEDVFIISAPLFHIFGMAINMLCAVAMGGRMILQEKFHPRETLQLIEQEKVTIQKGVP 265
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L K S++ L G +P++ + + L ++G+TET S
Sbjct: 266 TMFIKELELEDFDKY--DLSSLRAGLVGAAPIPAKTVTDIRERM-GINLCQSFGITETVS 322
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----S 382
MT YD T + N+T +GK P V LK+ +
Sbjct: 323 --ITMTSYDDTKQ----------NITET---------LGKAIPGVTLKIVDENRVDLPHG 361
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I +G VM Y++ E W +GD+G++D G + VGR+ I G
Sbjct: 362 EVGEIAVKGFGVMKGYYNMPEQTKQALDNEGWYYSGDLGTLDPQGYLRFVGRKKEMIIRG 421
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
G NVYP+E+EAV+++HP +I VVG+ + L E+ A +RL KN
Sbjct: 422 GLNVYPQEIEAVIMKHPKVIEAAVVGLPDKVLGEVACAVIRL---------------KNG 466
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
E + S E ++ + +EK + +K P V++ + FP+T++GKI++ ++R +V S+
Sbjct: 467 E-VSSEEEIKLYLKEK-MAIYKLPEK-VIFTEEFPVTASGKIQKLKLREQVSSN 517
>gi|419967656|ref|ZP_14483537.1| CoA synthetase [Rhodococcus opacus M213]
gi|414566929|gb|EKT77741.1| CoA synthetase [Rhodococcus opacus M213]
Length = 511
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/548 (26%), Positives = 235/548 (42%), Gaps = 70/548 (12%)
Query: 15 RIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
RI +N + G R T ++ LA GL +G+ GD V N LE +
Sbjct: 13 RITMTPKNEALVFDG-RAVTYEEMALRTRRLAHGLRALGVEKGDCVGFFGFNDPAALEVM 71
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS 134
A +G PLN R + +EA + R ++ + +L + P W
Sbjct: 72 FAAGLLGATYLPLNARLTAEEARYVLGDSRCTTVIFGDQQADVAQKLAQSDTPVTTW--- 128
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV----------IICFTSGTTG 184
+G S S +S + + P+ + ++ ++SGTTG
Sbjct: 129 IGLSDS----------------WSTHTYEGVRAGQPDTRIDEQVGLDDLSVLMYSSGTTG 172
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFI 243
+PKGV++SH ++ +L ++ + L APL HIGG+ A+ L+ G V +
Sbjct: 173 APKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPTLLNGGTVVLL 232
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
KF++ L+ +E+ +T+ VP ++ +L R S++ I G LP L
Sbjct: 233 RKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAICVAGAPLPEAL 290
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ + + AYG+TET+ S+T ++ D + + F T V +P G
Sbjct: 291 ISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FTDVDVVRPDGS 346
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH +G I+ +G +VML Y +Q A + + + WL TGD G
Sbjct: 347 SA---EPH-----------EIGEIVAKGPNVMLGYLNQPEAT-ARTIVDGWLHTGDAGYF 391
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 392 DDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK---------- 441
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
W E+ L + +R REK L GFK P F+ + P T+TGK
Sbjct: 442 ------WGETGMAFVVAADGTTLDEDTVRVRLREK-LAGFKIP-TFIQIAEALPRTATGK 493
Query: 544 IRRDEVRR 551
IR+ ++R+
Sbjct: 494 IRKPDLRK 501
>gi|339321983|ref|YP_004680877.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
gi|338168591|gb|AEI79645.1| long-chain-fatty-acid--CoA ligase LcfB [Cupriavidus necator N-1]
Length = 527
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 235/556 (42%), Gaps = 63/556 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + A ++ +V R T +F ++ +A+ LL G G+ + NS+
Sbjct: 9 LPHAVRHFARLRPEAVAYAFEGRQTTYAEFERNTNRVAQALLAEGAGVGERIGYIGKNSD 68
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
Y E +L + IG ++ P ++R + E + V+L S + L A+P
Sbjct: 69 HYFELLLGASKIGAVMTPASWRLAPPEVEFILGHCDAVVLFVGAESAAMVRNLL-PALPM 127
Query: 129 LRWHVSLGSSSSD-----FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+R V + + + RD + P H A ++ +TSGTT
Sbjct: 128 VRKVVVMEPCAEQGDWQCYTGWRD----------AQPDTPPAHQPAAHDVLLQLYTSGTT 177
Query: 184 GSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
G PKG +++H L V + + DDV L P+ HIGG + L+ GA
Sbjct: 178 GRPKGAMLTHRNLTIGTEVSERENVRWSHWVADDVSLVAMPVAHIGGSGWGLRNLLSGAK 237
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V +F+ ++ L+ +E+ ++ L VPA M + R ++ R +K +L G +
Sbjct: 238 GVVAREFDPRAVLDFIEKERISKLFLVPAAMQIVLRDPRARQVDYSR--LKYLLYGAAPI 295
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P+ L++E F + YGMTET+ ++ + D T E
Sbjct: 296 PAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPEDHTTE-----------------EV 337
Query: 360 PQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
P+ GKP P VE+KV VG ++ R H M YW Q E W
Sbjct: 338 PRMRAAGKPLPGVEIKVVDYEGRQLAPGEVGELVVRSQHNMAGYWKQPEETARTIDAEGW 397
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L TGD G +D G +++ R I SGGENVYP EVE+ + HP + + V+G+ + +
Sbjct: 398 LRTGDAGYMDADGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPQVADVAVIGVPDEKW 457
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A V L+ ++ ++ + L GFK P+ + + +
Sbjct: 458 GEAVKAIVVLKPGQAPDQAGIIAWTRQR-----------------LAGFKVPK-SIEFVE 499
Query: 535 PFPLTSTGKIRRDEVR 550
P +GK+ R ++R
Sbjct: 500 ALPRNPSGKLLRRKLR 515
>gi|311032883|ref|ZP_07710973.1| long-chain-fatty-acid--CoA ligase [Bacillus sp. m3-13]
Length = 546
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 245/568 (43%), Gaps = 78/568 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ +VV + + Q+F Q +A+GL+ +G++ GD +A+ A N +L A A I
Sbjct: 23 KEAVVYVETGLRYSYQEFQQICNQVAKGLMNLGIKKGDHIAVWATNKPEWLIIQYASAKI 82
Query: 81 GGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYL----------------ELQH 123
G ++ +N + KE + S +L+ D YL EL
Sbjct: 83 GAVLVTVNTSYQSKELEYLLRQSESTTLLLMDNFKGVSYLDMLQELCPELASSVPGELAS 142
Query: 124 TAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 176
T +P L+ + +GS S D +N + D L + +S E + +
Sbjct: 143 TRLPKLKNVIYMGSESHPGMFTWDDLLNNSFTIADDEL-------MARQNSTNYEDVINM 195
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 235
+TSGTTG PKGV+++HS +I ++ +D P H G + +A +
Sbjct: 196 QYTSGTTGFPKGVMLTHSNIINNAINVAECQKLTSEDKICIPVPFFHCFGCVMGTLAAVA 255
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA V + F+ L+AVEQ T+L VP + +A L S++ +
Sbjct: 256 KGATMVPLVMFDPLLVLKAVEQEKCTALYGVPTMF--IAELNHPDFEKYDLSSLRTGIMA 313
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P+E+MK + ++ AYG TE S +T YD + A NV
Sbjct: 314 GSPCPTEIMKRVVHDMGAKEITIAYGQTEASPVITQTRPYDSIERRVSTVGSALDNVDVK 373
Query: 356 SV------HQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 409
+ H P GV G + TRG VM Y++
Sbjct: 374 IIDPATGEHVPNGV--------------------QGELCTRGYLVMKGYYNMKDQTKDAI 413
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
E WL TGD+ ++DD G V + GR I GGEN+YP E+E L HP I + +VG+
Sbjct: 414 DSEGWLHTGDLATMDDDGYVVITGRLKDMIIRGGENIYPREIEEFLYSHPKIFDVQIVGV 473
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E V A ++++ ES L+S+ ++ +C K ++ +K P +
Sbjct: 474 PDEKFGEQVAAFIKVKP----GES------------LNSQEVKDYCTGK-ISKYKIP-YY 515
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHL 557
V +P+T++GKI++ ++R ++ L
Sbjct: 516 VEIVDEYPMTASGKIQKFKLREHAVNTL 543
>gi|194289655|ref|YP_002005562.1| amp-binding domain protein [Cupriavidus taiwanensis LMG 19424]
gi|193223490|emb|CAQ69495.1| putative Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase
[Cupriavidus taiwanensis LMG 19424]
Length = 574
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 248/550 (45%), Gaps = 77/550 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++F + + LA GL +GL GD V I A N +L A A +G ++ +N + E
Sbjct: 62 REFAEAIDALAAGLHALGLARGDRVGIWAPNRVEWLVTQFATARLGLVLVNINPAYRLAE 121
Query: 96 ASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSS 138
A+ + +V E+ S YLE LQ +PSLR + +G
Sbjct: 122 LEYALNKVGVKAIVAAEAFKTSRYLEMLQALAPELATSAPGALQAARLPSLRCVIRMGEG 181
Query: 139 SSDFVNKRDMLTADILK---GYSLRSLP-FTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+ + M AD+L G + L T A+ + FTSGTTG+PKG ++H
Sbjct: 182 ETPGM----MRYADVLARGAGVARAELDRITAQLDRHDAINVQFTSGTTGAPKGATLTHR 237
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSAL 252
++ + + + E D P H G+ S +A + GA VF + F+ ++ +
Sbjct: 238 NIVNNARFIAMAMRFSEQDKLCIPVPFYHCFGMVLSVLACVSTGAAMVFPGEAFDPEATM 297
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
AV + T+L VP + +A L + S++ + G P E MK
Sbjct: 298 RAVSEERCTALHGVPTMF--IAQLDHPRFADYDFSSLRTGIMAGSPCPIETMKRVVAQMH 355
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+++ AYGMTETS P +F + T + + + + VG+ PH+
Sbjct: 356 MSEVTIAYGMTETS-------------------PVSFQSSTTDPLDK-RTTTVGRIQPHL 395
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
E+K+ + V G + TRG VML YWD A+ + + + W+ TGD+ +ID+ G
Sbjct: 396 EVKIVDASGAIVPVGEKGELCTRGYSVMLGYWDD-EARTAEAIRDGWMHTGDLATIDEEG 454
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+VGR + GGEN+YP E+E L +HP + + V G+ + + E V A + L+
Sbjct: 455 YCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDPKYGEEVCAWIVLKPG 514
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR-- 545
+E +R CR++ + +K PR ++ + PLT TGK++
Sbjct: 515 ENATEDE----------------IRAFCRDQ-IAHYKIPR-YIRFVDEMPLTVTGKVQKF 556
Query: 546 --RDEVRREV 553
RD++ RE+
Sbjct: 557 VMRDQMVREL 566
>gi|228985053|ref|ZP_04145221.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228774741|gb|EEM23139.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 496
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/556 (26%), Positives = 245/556 (44%), Gaps = 73/556 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLE-IGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ + ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITDEEEMTYKQLHEYVNKVAAYLIYGLHVQKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTLLFVEETFQNMALSMQKVSYV 123
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+ +++ LK R + + IIC+TSGTTG PK
Sbjct: 124 ------------------QSVISIKSLKEMEDRKIDKFEEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQDNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E +AL +E+H VT ++ VP I L + T SV+ NGG P ELM+E
Sbjct: 226 EPTTALSMIEKHKVTVVMGVPTIHQALVNCENFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
N + L +GMTETS ++ ++ D + +
Sbjct: 284 FIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + + + + VG +L RG +VM YW++ A K ++ G WL TGD
Sbjct: 320 GKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKETIQDG--WLYTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG
Sbjct: 378 LARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG----------- 426
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
R+ +W E+ K +L+ + + +HCR L +K P+ +++ K P
Sbjct: 427 -----RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKYKIPKE-IIFLKELPKN 479
Query: 540 STGKIRRDEVRREVMS 555
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLANQLKS 495
>gi|432342459|ref|ZP_19591730.1| CoA synthetase [Rhodococcus wratislaviensis IFP 2016]
gi|430772506|gb|ELB88263.1| CoA synthetase [Rhodococcus wratislaviensis IFP 2016]
Length = 511
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 150/546 (27%), Positives = 233/546 (42%), Gaps = 56/546 (10%)
Query: 15 RIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
RI +N + G R T ++ LA GL +G+ GD V N LE +
Sbjct: 13 RITMTPKNEALVFDG-RAVTYEEMALRTRRLAHGLRALGVEKGDCVGFFGFNDPAALEVM 71
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS 134
A +G PLN R + +EA + R ++ + +L + P W +
Sbjct: 72 FAAGLLGATYLPLNARLTAEEARYVLGDSRCTTVIFGDQQADVAQKLAKSDTPVTTW-IG 130
Query: 135 LGSSSSDFVN---KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
LG+S S + I + L L ++ ++SGTTG+PKGV++
Sbjct: 131 LGNSWSTHTYEGVRAGQPDTRIDEQVGLDDLS-----------VLMYSSGTTGAPKGVML 179
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFIPKFESKS 250
SH ++ +L ++ + L APL HIGG+ A+ L+ G V + KF++
Sbjct: 180 SHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPTLLNGGTVVLLRKFDAGV 239
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+ +E+ +T+ VP ++ +L R S++ I G LP L+ +
Sbjct: 240 VLDTIEKERITTFFAVPTMIQELWHHPRFADA--DVSSLRAICVAGAPLPEALISPWQDR 297
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ AYG+TET+ S+T ++ D + + F T V +P G P
Sbjct: 298 --DVAITQAYGLTETAPSVTMLSSADVRTKIGSAGKRTF--FTDVDVVRPDGSSA---EP 350
Query: 371 HVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
H +G I+ +G +VML Y +Q A + WL TGD G DD G ++
Sbjct: 351 H-----------EIGEIVAKGPNVMLGYLNQPEATARTIV-DGWLHTGDAGYFDDEGFLF 398
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ R SGGENVYP EVEA LL+ GI V+G+ + + W
Sbjct: 399 ICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK----------------W 442
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E+ L E +R REK L GFK P + + P T+TGKIR+ ++R
Sbjct: 443 GETGMAFVVAADGTTLDEETVRVRLREK-LAGFKIPTCIQI-AEALPRTATGKIRKPDLR 500
Query: 551 REVMSH 556
+ S
Sbjct: 501 KLAASQ 506
>gi|196248595|ref|ZP_03147296.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|196212320|gb|EDY07078.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 524
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 244/531 (45%), Gaps = 48/531 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV + R T ++ +V A LE G+R GD V+ N+ + A A I
Sbjct: 19 REAVVEVATGRRYTYAEWEVEVNRWANAFLEAGVRKGDRVSTVLYNTLELATALFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G + P+N+R +E + + P +++ + S +E Q AI S HVS S
Sbjct: 79 GAVFNPINFRLKAEEIAYILMDAEPKIVIFERS-----VEPQLAAISSRFPHVSFWSIDG 133
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
D +++ + P H + I+ +TSGTTG PKGV+ H +I QS
Sbjct: 134 DPPPFAKNAYEQVVQ--ATDEAPHVHVEESDLYAIM-YTSGTTGRPKGVMHRHRDMIEQS 190
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHC 259
+ ++ E D L APL H L + + GA V + F++K LE +E+
Sbjct: 191 VVCQGVMRIRETDRGLAAAPLFHCAELHCCLLPRVHAGAASVILHHFDAKLVLETIERER 250
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLI 317
+T + P + + +++ G D S++ L G + L+++ LI
Sbjct: 251 ITLMFGAPTMWNMI-----LQENVSGYDISSLRLGLYGAAPMAPALVRQCQERL-GIGLI 304
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYGMTE ++TF+ L D L+ G +A N H+ + V + P V
Sbjct: 305 QAYGMTEMGPAVTFL-LEDEQLKKAGSAGRACVN------HEIRVVRAREDGPSDPDDVL 357
Query: 378 SDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
G VG I+ RG +M Y+ + A + ++ G W +GD+G +D+ G +++ R +
Sbjct: 358 PPGE--VGEIVMRGPCMMAGYYKREEATEKALYKG--WYHSGDLGYVDEDGYLYVADRVD 413
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
I SGGENVYP EVE VL +HPG++ + V+G + E VVA V
Sbjct: 414 DMIISGGENVYPREVEDVLYEHPGVLDVAVLGEPDELWGEKVVAFV-------------- 459
Query: 497 QSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ LL+++ L Q C+ + L +K PR + P ++GKI++
Sbjct: 460 ---VKKDALLTADELEQFCKTSDRLAPYKRPRAYYFI-DALPRNASGKIQK 506
>gi|114047851|ref|YP_738401.1| AMP-binding domain protein [Shewanella sp. MR-7]
gi|113889293|gb|ABI43344.1| AMP-dependent synthetase and ligase [Shewanella sp. MR-7]
Length = 570
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 152/548 (27%), Positives = 242/548 (44%), Gaps = 68/548 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFK 94
+Q++ + LA GLL++G+ GD V I S N EW L A A IG I+ +N + +
Sbjct: 59 RQYLAQIDALATGLLKLGIGPGDRVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYRPE 117
Query: 95 EASRAITSI--RPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E A+T++ R V + D+ S YL+ LQ A+P L + + +G
Sbjct: 118 ELQYALTNVGCRAV-ICADKFKSSNYLQMLYELAPELKVCAAGQLQAKALPELEFVIRMG 176
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ S + D L ++ S +P A+ I FTSGTTGSPKG +SH +
Sbjct: 177 TEKSLGMLNFDDLLLEVTPDDKAALDRIAESLSPYDAINIQFTSGTTGSPKGATLSHHNI 236
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSALEA 254
+ + + +D PL H G+ + L GA VF F+ + LE
Sbjct: 237 LNNGYLVAEAMKFTCNDKLCIPVPLYHCFGMVLGNLVCLAKGAAAVFPGDSFDPLTTLEV 296
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ T+L VP + +A L + S++ + G P E+M+ N
Sbjct: 297 IERERCTALHGVPTMF--IAELEHPEFKRFDLSSLRTGVMAGATCPEEVMRRVQNLMYMQ 354
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+++ YG TE S L +T D +E + + VG+ PH E+
Sbjct: 355 EVLIGYGQTE-CSPLNHITEIDSPVEK-------------------RVLTVGRALPHTEV 394
Query: 375 KVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
K+ + + G + +RG +M YW+ + E WL +GDIG +D+ G V
Sbjct: 395 KIVDEFGEVLPINTPGEVCSRGYCIMQCYWNDPEKTAATIDSEGWLHSGDIGQMDEQGYV 454
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E L H + V G+ + + E V A +++R
Sbjct: 455 QIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKVRSGAT 514
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
SE E +R EK FK PR ++ + + +P+T TGKI++ ++
Sbjct: 515 ISE----------------EDIRHFLTEK-FAYFKVPR-YIKFVEQYPMTVTGKIQKFKM 556
Query: 550 RREVMSHL 557
R + L
Sbjct: 557 RELMYQEL 564
>gi|221214286|ref|ZP_03587258.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
gi|221165941|gb|EED98415.1| AMP-binding domain protein [Burkholderia multivorans CGD1]
Length = 575
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 159/561 (28%), Positives = 247/561 (44%), Gaps = 88/561 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA GL +G+R GD V I + N SEW L A A IG I+ +N +
Sbjct: 60 TWREFAAEIDVLAAGLAALGIRKGDRVGIWSPNRSEWLLTQ-FATARIGAILVNINPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ E S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCTAVIAAERFKSSAYVEMLQTIAPELANAAPGELRAARVPSLRTVVSM 178
Query: 136 GSSSSDFVNKRDMLTADIL-------KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
G D AD++ +L +L T A + I FTSGTTGSPKG
Sbjct: 179 G----DVAPPGMFRFADVIARGRASVDSAALDALGAT--LAATDPINIQFTSGTTGSPKG 232
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-F 246
++H ++ + + + E D PL H G+ A +A + GA VF + F
Sbjct: 233 ATLTHRNVVNNARFIARAMRFSEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAF 292
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L AV + T+L VP + +A L + +++ + G P E MK
Sbjct: 293 DPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMKR 350
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ +++ AYGMTETS ++F + D LE + VG
Sbjct: 351 VVSQMHLSEITIAYGMTETSP-VSFQSSTDDPLEK-------------------RTTTVG 390
Query: 367 KPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDT 417
+ PH+E+K+ G V G + T+G VML YWD T EV W+ T
Sbjct: 391 RVQPHLEVKIVDPGGEIVPVGVTGELCTKGYSVMLGYWDD-----DAKTREVLIDGWMHT 445
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ ++D G +VGR + GGENVYP E+E L +HP I V G+ + + E
Sbjct: 446 GDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEE 505
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+ A + LR Q +E + +R C + + +K PR ++ + P
Sbjct: 506 LCAWIVLRADEQMTEDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELP 547
Query: 538 LTSTGKIRRDEVRREVMSHLK 558
+T TGK+++ +R ++ LK
Sbjct: 548 MTVTGKVQKFVMRERMIDELK 568
>gi|429749086|ref|ZP_19282231.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429169054|gb|EKY10839.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 543
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 242/544 (44%), Gaps = 61/544 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
+ +++ N T +F + V +A+GL+ +G++SGD V I + N SEW L A A
Sbjct: 34 KEALIVSHQNYRATYAEFYEQVTAVAKGLIALGVKSGDRVGIWSPNCSEWTL-LQFATAK 92
Query: 80 IGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSL 135
IG I+ +N + E I S M ++ S Y ++ A SLR V
Sbjct: 93 IGVIMVNINPAYRTSELIYVINQSGIAYMFAAEKFKSSDYRKMIDDAREFTESLRKEVFW 152
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G F+ K ++ + LK Y + + F + V I +TSGTTG+PKGV +SH
Sbjct: 153 GEEWQRFLEKGKKISDEKLKEYEDK-VQF------DDPVNIQYTSGTTGNPKGVTLSHHN 205
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALE 253
++ + + Y E D P H G+ + IP F++ LE
Sbjct: 206 ILNNAYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLCCTSHGATMVIPNDSFDATRTLE 265
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AVE+ TSL VP + ++ L + + S++ + G P E+MK
Sbjct: 266 AVEKERCTSLYGVPTMF--ISELYVLDRHPYDLSSLRTGVMAGALCPPEIMKRVKEQMNM 323
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ YGMTETS P G +H VG H+E
Sbjct: 324 HEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----VGTIHDHLE 363
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +DD G
Sbjct: 364 IKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATAQVIDEQRWMHSGDLAMMDDDG 423
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +E
Sbjct: 424 YVHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKFGEEVMAWIKPKEG 483
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ L+ E L C+ + + +K PR + ++ FP+T +GKIR+
Sbjct: 484 ----------------VTLTEEELHNFCKGR-IAHYKVPRYWKFVQE-FPMTISGKIRKV 525
Query: 548 EVRR 551
E+R
Sbjct: 526 EMRE 529
>gi|56420133|ref|YP_147451.1| AMP-binding protein [Geobacillus kaustophilus HTA426]
gi|375008623|ref|YP_004982256.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56379975|dbj|BAD75883.1| fatty-acid-CoA ligase [Geobacillus kaustophilus HTA426]
gi|359287472|gb|AEV19156.1| acyl-CoA synthetase yngI [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 544
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 243/559 (43%), Gaps = 74/559 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV T +QF +ARGL+ +G+ G+ VAI A N ++ A +
Sbjct: 20 REAVVYADRGLRLTYRQFNDYCRLVARGLMRLGIEKGEHVAIWATNVPEWIACQFATGKM 79
Query: 81 GGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E + S + + ++ DS Y+++ + +P LR S+
Sbjct: 80 GAVLVTVNTNYRAAELEYLLRQSDSTTLFLIEQYRDSSYIDILYEIVPELR-----TSAP 134
Query: 140 SDFVNKR-DMLTADILKGYSLRSLPFT--------------------HSWAPEGAVIICF 178
+KR L + G FT S P + + +
Sbjct: 135 GQLQSKRLPKLKNVVFLGDKRHPGMFTWNDILAMAHDVSEEELDERMESLDPHDVINMQY 194
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVG 237
TSGTTG PKGV+++H ++ + +G GE D P H G + S +A + VG
Sbjct: 195 TSGTTGFPKGVMLTHYNIVNNAHQVAQCMGLGEGDRLCIPVPFFHCFGCVMSTLACVTVG 254
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
A V + +F K LE VE T+L VP + +A L S++ + G
Sbjct: 255 ATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKYDLSSLRTGIMAGS 312
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+MK + AYG TE S +T DP LE +
Sbjct: 313 PCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDP-LELRVE------------- 358
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTG 411
VG+ P VE+K+ G++ G + TRG HVM Y++ A
Sbjct: 359 ------TVGRALPGVEVKIVEPGTNKEVPPGVQGELCTRGYHVMKGYYNNPEATNEAIDQ 412
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
+ WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I+ + VVG+ +
Sbjct: 413 DGWLHTGDLATMDENGYFRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPD 472
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
E V+A + L++ ++E +R+ CR +++ K PR ++
Sbjct: 473 EVYGEEVMAWIILKDGET----------------ATAEEIREFCR-GHISRHKIPR-YIE 514
Query: 532 WRKPFPLTSTGKIRRDEVR 550
+ +P+T++GKI++ ++R
Sbjct: 515 FTDSYPMTASGKIQKFKLR 533
>gi|319653022|ref|ZP_08007127.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
gi|317395371|gb|EFV76104.1| acyl-CoA synthase [Bacillus sp. 2_A_57_CT2]
Length = 550
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 139/549 (25%), Positives = 250/549 (45%), Gaps = 81/549 (14%)
Query: 46 ARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIR 104
A+G +++GL G+ +A + N+ +L + +G ++ +N + E + S
Sbjct: 48 AKGFMKLGLEKGEHIAAWSTNTPEWLTCQFSTGKMGAVLVTVNTNYQAAELEYLLKQSDS 107
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR-DMLTADILKGYSLRSLP 163
+++ ++ ++ Y+E+ ++ +P L+ S +KR L I+ G + P
Sbjct: 108 TTIVLMEKFRETSYIEMLYSIVPELK-----DSEPGQLKSKRLPFLKNVIVMGE--KRFP 160
Query: 164 FTHSWAP----------------------EGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
T+SW + A+ + +TSGTTG PKGV+++H+ ++
Sbjct: 161 GTYSWEDMIRMGESVPDAELNERMESLDSDDAINMQYTSGTTGFPKGVMLTHNNIVNNGY 220
Query: 202 AKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCV 260
+ +DD P H G + MA + VGA V + +F K+ L+ V+
Sbjct: 221 NIANCMRLTKDDRLCIPVPFFHCFGCVLGTMACISVGATIVPVQEFSPKAVLKTVQDEKC 280
Query: 261 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 320
T L VP + +A L + +++ + G P E+MK +++ AY
Sbjct: 281 TGLHGVPTMF--IAELNDPDFSKYDLSTLRTGIMAGSNCPIEVMKGVIERMGASEITIAY 338
Query: 321 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 380
G TE+S +T DP + + VG+ P+VE+K+ G
Sbjct: 339 GQTESSPVITQTRTDDPI--------------------ELRVESVGRALPNVEVKIVEPG 378
Query: 381 SSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+++ G + TRG HVM Y+ A E WL TGD+ +D+ G + GR
Sbjct: 379 TNNEVPTGEQGELCTRGYHVMKGYYKNPDATKEAIDKEGWLHTGDLAVMDENGYCKITGR 438
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
I GGEN+YP E+E L HP I+ + VVG+ +A E VVA + L+E + + ++
Sbjct: 439 LKDMIIRGGENIYPREIEEFLYTHPAILDVQVVGVPDAVYGEEVVAWIILKEDAELTPAD 498
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR---R 551
LR++C+ K ++ K PR ++ + K +P+T++GKI++ ++R +
Sbjct: 499 ----------------LREYCKGK-ISRHKIPR-YIEFTKQYPMTASGKIQKFKLREQAK 540
Query: 552 EVMSHLKSL 560
EV+ +L
Sbjct: 541 EVIEKANTL 549
>gi|399053605|ref|ZP_10742404.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|433546213|ref|ZP_20502546.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
gi|398048382|gb|EJL40854.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. CF112]
gi|432182483|gb|ELK40051.1| long-chain-fatty-acid--CoA ligase [Brevibacillus agri BAB-2500]
Length = 552
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 251/555 (45%), Gaps = 88/555 (15%)
Query: 37 QFVQDVLN-LARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
QF Q+V N ARG + +G++ G+ +AI A N EW + A A +GG++ +N +
Sbjct: 37 QF-QEVCNRAARGFMSLGIQKGENIAIWATNVPEWVISQ-FATAKMGGVLVTVNTSYRVH 94
Query: 95 EASRAI-TSIRPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLGS 137
E + S +L+ D D+ YLE L +P+LR V LG
Sbjct: 95 ELEYLLRQSESTTLLLIDGYRDANYLEMIREICPELATCEPGALVSKRLPNLRNVVYLGE 154
Query: 138 SSS-------DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
D + + ++++ + + LR S + + + + +TSGTTG PKGV+
Sbjct: 155 ERQPGMFLWKDLLERAELVSEEEQR---LRQ----ESLSFDDVINMQYTSGTTGFPKGVM 207
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESK 249
+SH ++ ++ G G DD P H G + +A + GA V + F+
Sbjct: 208 LSHVNIVNNAIKVAECQGLGVDDRVCIPVPFFHCFGCVMGTLACVATGATMVPVIAFDPG 267
Query: 250 SALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKE 306
L VE T+L VP + +A+L T++ RD S++ + G P E+MK+
Sbjct: 268 LVLSIVEAERCTALYGVPTMFIAELN-----HPTFEQRDLSSLRTGIMAGSLCPIEVMKK 322
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ + AYG TE+S +T P + + VG
Sbjct: 323 VVDKMGIRDITIAYGQTESSPVIT--------------------QTRPEDSIERKVSTVG 362
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ VE K+ + + + G + TRG VM Y++ E WL TGD+
Sbjct: 363 RLHEGVEAKIINPATGEIVPPGVQGELCTRGYLVMKGYYNMPDQTAKAIDEEGWLHTGDL 422
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++D+ G + GR I GGEN+YP EVE L HP I+ + +VG+ +A+ E V+A
Sbjct: 423 ATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHPKILDVQIVGVPDAKYGEQVLA 482
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
C+R+ K E L EVL +C E + FK PR ++ + +P+T+
Sbjct: 483 CIRV---------------KPGETLTEEEVL-AYC-EGKIARFKTPR-YIQFVDEYPMTA 524
Query: 541 TGKIRRDEVRREVMS 555
+GKI++ ++R + ++
Sbjct: 525 SGKIQKFKLREQALA 539
>gi|386334612|ref|YP_006030783.1| long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
gi|421899919|ref|ZP_16330282.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|206591125|emb|CAQ56737.1| fatty-acid--coa ligase protein [Ralstonia solanacearum MolK2]
gi|334197062|gb|AEG70247.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum Po82]
Length = 573
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 253/545 (46%), Gaps = 77/545 (14%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAIT 101
LA GL +GL+ GD + I + N EW+L A A +G I+ +N + E A+
Sbjct: 68 LAAGLHALGLQRGDRIGIWSPNR---YEWVLTQFATARLGLILVNINPAYRLAELEYALN 124
Query: 102 SIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSSSS-DFV 143
+ +V E+ S YLE LQ +P+LRW + +G ++ +
Sbjct: 125 KVGCKAIVAAEAFKTSRYLEMLQTLAPELATAQPGALQAAKLPALRWVIRMGEGATPGMI 184
Query: 144 NKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS-L 201
N +++ +G S +L + +P+ A+ I FTSGTTG+PKG ++H ++ +
Sbjct: 185 NFGEVIARGQGEGVSADTLDAIAAALSPDDAINIQFTSGTTGAPKGATLTHINVVNNARF 244
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESKSALEAVEQHC 259
+A+ G D + + PL H G+ S +A GAC VF + F+ + L V +
Sbjct: 245 VAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTATGACMVFPGEAFDPLATLRTVAEER 303
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 319
T+L VP + +A L + S++ + G P E+MK ++ A
Sbjct: 304 CTALHGVPTMF--IAQLDHPEFHSFDVSSLRGGIMAGSPCPIEVMKRVVAEMHLREITIA 361
Query: 320 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
YGMTETS P +F + + + + + VG+ PH+++K+ D
Sbjct: 362 YGMTETS-------------------PVSFQSAVTDPLDK-RVTTVGRIQPHLQVKLV-D 400
Query: 380 GSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
G+ V G + T+G VML YWD AK + S + W+ TGD+ + D G +VG
Sbjct: 401 GAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESVVDGWMRTGDLATFDADGYCNIVG 459
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + GGENVYP E+E L +HP + + V G+ + + E V A + L+ Q +E
Sbjct: 460 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATE- 518
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
E +R C + + +K PR ++ + P+T TGK+++ +R +
Sbjct: 519 ---------------EEIRAFC-QGQIAHYKIPR-YIRFVPEMPMTVTGKVQKFIMRERM 561
Query: 554 MSHLK 558
+ LK
Sbjct: 562 IEELK 566
>gi|110678441|ref|YP_681448.1| long chain fatty acid acyl-CoA ligase [Roseobacter denitrificans
OCh 114]
gi|109454557|gb|ABG30762.1| putative long chain fatty acid acyl-CoA ligase [Roseobacter
denitrificans OCh 114]
Length = 565
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 237/549 (43%), Gaps = 66/549 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T + F ++V LA GLL +G+ GD V I A N +L A A IG I+ +N +
Sbjct: 55 TYRDFEREVDRLAAGLLTLGIEKGDRVGIWAPNCAEWLLTQFATARIGAILVCINPAYRL 114
Query: 94 KEASRAITSIRPVMLVT---DESSD--SWYLEL------------QHTAIPSLRWHVSLG 136
E A+ + LV +SSD + EL Q +P LR + G
Sbjct: 115 SELEYALNKVGCAALVMAPRHKSSDYVAMLTELMPELANATPGACQAARVPMLRHVIVTG 174
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLP-FTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
+ D L A G S+ +L ++ +P+ A+ I FTSGTTGSPKG ++H
Sbjct: 175 DAPPAGTTGFDALCA-AGSGVSVETLDQISNDLSPQDAINIQFTSGTTGSPKGACLTHHN 233
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALE 253
++ + + + E D P H G+ + + IP F++++ LE
Sbjct: 234 IVNNAHFVTQTMQFTEADRLCIPVPFYHCFGMVMGTLGCVSKGATMVIPGEGFDARTTLE 293
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AV + T+L VP + + L S++ + G P E+M++
Sbjct: 294 AVTREKCTALYGVPTMFVNALELADFDAF--DLSSLRTGIMAGAPCPIEVMRQVQARMHM 351
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+ AYGMTETS ++F + D LE + VG+ PHVE
Sbjct: 352 HGVTIAYGMTETSP-VSFQSNVDDPLEK-------------------RVSSVGRIHPHVE 391
Query: 374 LKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
+K+ + V G +LTRG VML YW+ + + W+ TGD+ +D G
Sbjct: 392 VKIVDATGNTVKTGEQGELLTRGYSVMLGYWEDDAQTAASIDAQGWMHTGDLARLDADGF 451
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+ GR I GGEN+YP E+E L HP I+ V GI + +L E V A + R
Sbjct: 452 CTITGRLKDMILRGGENIYPREIEEFLYTHPDILQAQVFGIPDHKLGEAVCAWIVARAGS 511
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
+E++ ++ CR + FK P +V ++ P+T TGK ++
Sbjct: 512 DLTETD----------------VQDFCRSA-IAHFKVP-AYVSFKDELPMTVTGKPQKFV 553
Query: 549 VRREVMSHL 557
+R ++ L
Sbjct: 554 MRDRMVKEL 562
>gi|374370611|ref|ZP_09628612.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373097896|gb|EHP39016.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 578
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 153/554 (27%), Positives = 242/554 (43%), Gaps = 79/554 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI---LAVAFIGGIVAPLNYRWS 92
+F V LA GL +GLR GD + I + N EW A A +G ++ +N +
Sbjct: 66 HEFSDAVNALAAGLHTLGLRRGDRIGIWSPNR---FEWTVTQFATARLGLVLVNINPAYR 122
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP----------------SLRWHVSL 135
E A+ +R ++ ES S YLE+ T P +LRW + +
Sbjct: 123 LAELEYALNKVRCKAIIAPESFKTSRYLEMLQTLAPELQHCEPGALQAARLLTLRWVIRM 182
Query: 136 GS-SSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ + RD+ + G + L + P + I FTSGTTG+PKG ++H
Sbjct: 183 EDVPTPGMLTYRDVNARGV--GVEVSELDAISEKLDPHDPINIQFTSGTTGAPKGATLTH 240
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESKSA 251
+I + + E D PL H G+ S + + GAC +F + F+ +
Sbjct: 241 RNIINNARFVSMAMNLQEQDRLCIPVPLYHCFGMVMSVLVCTITGACMIFPGEAFDPVAT 300
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
+ AV + T+L VP + +A L S++ + G P E+MK
Sbjct: 301 MAAVSEERCTALHGVPTMF--IAQLDHPAFATYDFSSLRTGIMAGAPCPIEVMKRVVADM 358
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ AYGMTETS P +F + T + + + + VG+ PH
Sbjct: 359 HMTEITIAYGMTETS-------------------PVSFQSATDDPLDK-RVATVGRVQPH 398
Query: 372 VELKVC-SDGS----SHVGRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDTGDIGSIDD 425
+E KV +DG G + TRG VML YWD + + S+ G W+ TGD+ +ID
Sbjct: 399 LECKVVDTDGQIVPVGATGELCTRGYSVMLGYWDDETRTRESIRDG--WMHTGDLATIDT 456
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +VGR + GGENVYP EVE L +HP + + V G+ + + E + A V L+
Sbjct: 457 EGYCNIVGRVKDMLIRGGENVYPREVEEFLFRHPKVQSVQVFGVPDPKYGEEICAWVVLK 516
Query: 486 ESWQWSESN-CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ +E CD CR++ + +K PR ++ + P+T TGK+
Sbjct: 517 QGQGATEEEICD-----------------FCRDQ-IAHYKIPR-YIRFVNEMPMTITGKV 557
Query: 545 RRDEVRREVMSHLK 558
++ +R + L
Sbjct: 558 QKFVMRESMTRELN 571
>gi|83746599|ref|ZP_00943649.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|207742291|ref|YP_002258683.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
gi|83726733|gb|EAP73861.1| Long-chain-fatty-acid--CoA ligase [Ralstonia solanacearum UW551]
gi|206593679|emb|CAQ60606.1| fatty-acid--coa ligase protein [Ralstonia solanacearum IPO1609]
Length = 573
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 153/545 (28%), Positives = 253/545 (46%), Gaps = 77/545 (14%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAIT 101
LA GL +GL+ GD + I + N EW+L A A +G I+ +N + E A+
Sbjct: 68 LAAGLHALGLQRGDRIGIWSPNR---YEWVLTQFATARLGLILVNINPAYRLAELEYALN 124
Query: 102 SIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSSSS-DFV 143
+ +V E+ S YLE LQ +P+LRW + +G ++ +
Sbjct: 125 KVGCKAIVAAEAFKTSRYLEMLQTLAPELATTQPGALQAAKLPALRWVIRMGEGATPGMI 184
Query: 144 NKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS-L 201
N +++ +G S +L + +P+ A+ I FTSGTTG+PKG ++H ++ +
Sbjct: 185 NFGEVIARGQGEGVSADTLDAIAAALSPDDAINIQFTSGTTGAPKGATLTHINVVNNARF 244
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESKSALEAVEQHC 259
+A+ G D + + PL H G+ S +A GAC VF + F+ + L V +
Sbjct: 245 VAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTATGACMVFPGEAFDPLATLRTVAEER 303
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 319
T+L VP + +A L + S++ + G P E+MK ++ A
Sbjct: 304 CTALHGVPTMF--IAQLDHPEFHSFDVSSLRGGIMAGSPCPIEVMKRVVAEMHLREITIA 361
Query: 320 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
YGMTETS P +F + + + + + VG+ PH+++K+ D
Sbjct: 362 YGMTETS-------------------PVSFQSAVTDPLDK-RVTTVGRIQPHLQVKLV-D 400
Query: 380 GSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
G+ V G + T+G VML YWD AK + S + W+ TGD+ + D G +VG
Sbjct: 401 GAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESVVDGWMRTGDLATFDADGYCNIVG 459
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + GGENVYP E+E L +HP + + V G+ + + E V A + L+ Q +E
Sbjct: 460 RVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKPGQQATE- 518
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
E +R C + + +K PR ++ + P+T TGK+++ +R +
Sbjct: 519 ---------------EEIRAFC-QGQIAHYKIPR-YIRFVPEMPMTVTGKVQKFIMRERM 561
Query: 554 MSHLK 558
+ LK
Sbjct: 562 IEELK 566
>gi|387813582|ref|YP_005429064.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338594|emb|CCG94641.1| long-chain-fatty-acid-CoA ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 562
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 243/552 (44%), Gaps = 82/552 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGIVAPLNYRWS 92
T ++FV V AR + IG++ GD V I + N EW + A A +G I+ +N +
Sbjct: 49 TYKEFVDKVNEAARAFMAIGVKRGDRVGIWSPNRYEWTVTQ-FATAKVGAILVNINPAYG 107
Query: 93 FKEASRAITSIRPVMLVT-DESSDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ +LVT D S Y E L+ +P LR +++
Sbjct: 108 VHELKYAMNLAGISVLVTADSFKTSNYREMIYELAPELKRSAPGKLKADNVPDLRAVINV 167
Query: 136 GSSS-------SDFVN-KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+ DF+ D+ AD+ K L F + + I FTSGTTG+PK
Sbjct: 168 HPDNHEGMWTWQDFLGFAGDVSEADLAK--RQDELQF------DDPINIQFTSGTTGNPK 219
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK-- 245
G ++H ++ E+D + PL H G+ + + P
Sbjct: 220 GATLTHHNILNNGYFVGESQRLTENDRLVIPVPLYHCFGMVMGNLGCITHGTAMIYPSEG 279
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ K+ L+AV Q T+L VP + +A L + +++ + G P+E+MK
Sbjct: 280 FDPKTVLQAVHQEKATALYGVPTMF--IAELADPEFDSYDLSTLRTGIMAGSICPAEVMK 337
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ ++ AYGMTETS T + DP + Q V
Sbjct: 338 KVNGKMHMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTV 377
Query: 366 GKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
G+ PH+E K+ G+ +V G + TRG VML+YW+ W+ TGD
Sbjct: 378 GRTQPHLETKIVDPGTGNVMPRGEIGELCTRGYSVMLKYWNNEEKTREAIDDAGWMHTGD 437
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ ++D+ G + +VGR + GGEN+YP+E+E L HP I + V GI + + E ++
Sbjct: 438 LATMDEDGYIQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDEKYGEELI 497
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V+LR + D +++E L+ C+ K + FK P+ + + FP+T
Sbjct: 498 AWVKLR-------PDADP--------VTAEDLQAFCKGK-IAHFKIPKNYK-FVDAFPMT 540
Query: 540 STGKIRRDEVRR 551
TGKI++ ++R
Sbjct: 541 VTGKIQKFKMRE 552
>gi|218903081|ref|YP_002450915.1| acyl-CoA synthetase [Bacillus cereus AH820]
gi|218536223|gb|ACK88621.1| putative feruloyl-CoA synthetase [Bacillus cereus AH820]
Length = 496
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 252/557 (45%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ E+ ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENEIIFQLKDSGTTVLFVEETFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIDNFVEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K P
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLVNQLKSR 496
>gi|374365200|ref|ZP_09623293.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
gi|373103335|gb|EHP44363.1| AMP-binding domain protein [Cupriavidus basilensis OR16]
Length = 573
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 150/546 (27%), Positives = 245/546 (44%), Gaps = 70/546 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++F Q V +A GL +GL GD + I + N +L A A +G ++ +N + E
Sbjct: 62 REFAQVVDAMAGGLRLLGLERGDRIGIWSPNRVEWLVTQFATARLGLVLVNINPAYRLAE 121
Query: 96 ASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSS 138
A+ + +V+ ES S YLE LQ +P+LRW + +G
Sbjct: 122 LEYALNKVGCKAIVSAESFKTSRYLEMLQTLAPELQQCEPGALQAARLPALRWVIRMGGE 181
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
+ + D L A + T + I FTSGTTG+PKG ++H ++
Sbjct: 182 RTPGMLNYDALLAHGTHALTGELDAITAQLDRYDPINIQFTSGTTGAPKGATLTHRNIVN 241
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVE 256
+ + E D P H G+ A +A + GAC VF + FE + + AV
Sbjct: 242 NGRFIAMAMRFSEQDKLCIPVPFYHCFGMVLAVLACVSTGACMVFPGEAFEPAATMAAVS 301
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ T+L VP + +A L + +++ + G P E MK + A++
Sbjct: 302 EERCTALHGVPTMF--IAQLDHPDFSKYDFSTLRTGIMAGSPCPIETMKRVIANMHMAEV 359
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
AYGMTETS P +F + T + + + + VG PH+E+K+
Sbjct: 360 TIAYGMTETS-------------------PVSFQSSTTDPLDK-RVTTVGLIQPHLEVKL 399
Query: 377 CSDGSSHV------GRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
DG+ + G + TRG VM YWD + + ++ G W+ TGD+ +ID+ G
Sbjct: 400 V-DGTGEIVPVGEKGELCTRGYSVMQGYWDDEPRTREAIRDG--WMHTGDLATIDEEGYC 456
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR + GGENVYP E+E L +HP + + V G+ + + E V A + L+
Sbjct: 457 NIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVFGVPDPKYGEEVCAWIVLKPGET 516
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+E + +R CR++ + +K PR ++ + P+T TGK+++ V
Sbjct: 517 ATEDD----------------IRAFCRDQ-IAHYKIPR-YIRFVDEMPMTITGKVQK-FV 557
Query: 550 RREVMS 555
RE M+
Sbjct: 558 MRERMT 563
>gi|170699476|ref|ZP_02890519.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170135625|gb|EDT03910.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 575
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 246/558 (44%), Gaps = 82/558 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++FVQ+V LA GL +G+ GD V I + N SEW L A A IG ++ +N +
Sbjct: 60 TWREFVQEVDVLAAGLAALGIVKGDCVGIWSPNRSEWLLTQ-FATARIGAVLVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ I ++ + S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKIGCKAVIAAERFKTSAYVEMLQTIAPELASATPGDLRAVRVPSLRTVVSM 178
Query: 136 GSSS-------SDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
G + +D + + RD L L + A + I FTSGTTGSPK
Sbjct: 179 GEVAPAGMFRFADVMARGRDTLDVAWLDAIG-------ATLAATDPINIQFTSGTTGSPK 231
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK- 245
G ++H ++ + + + E D PL H G+ A +A + GA VF +
Sbjct: 232 GATLTHRNVVNNARFIAMAMRFSEQDSLCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEA 291
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + L AV T+L VP + +A L +++ + G P E MK
Sbjct: 292 FDPVATLAAVADERCTALHGVPTMF--IAELDHPAFAKFDLSTLRTGIMAGSPCPIETMK 349
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ +++ AYGMTETS P +F + T + + + + V
Sbjct: 350 RVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTV 389
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G+ PH+E+K+ V G + T+G VML YWD AK + W+ TGD+
Sbjct: 390 GRIQPHLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDD-AKTREVLVDGWMHTGDL 448
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++D G +VGR + GGENVYP E+E L +HP I V G+ +A+ E + A
Sbjct: 449 ATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEELCA 508
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ LR Q SE + +R C + +K PR ++ + P+T
Sbjct: 509 WIVLRADEQMSEDD----------------VRAFC-NGQIAHYKIPR-YIRFVDELPMTV 550
Query: 541 TGKIRRDEVRREVMSHLK 558
TGK+++ +R ++ LK
Sbjct: 551 TGKVQKFVMRERMIEELK 568
>gi|448237839|ref|YP_007401897.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
gi|445206681|gb|AGE22146.1| acyl-CoA synthetase [Geobacillus sp. GHH01]
Length = 544
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 149/562 (26%), Positives = 243/562 (43%), Gaps = 80/562 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV T +QF +ARGL+ +G+ G+ VAI A N ++ A +
Sbjct: 20 REAVVYADRGLRLTYRQFNDYCRLVARGLMRLGIEKGEHVAIWATNVPEWIACQFATGKM 79
Query: 81 GGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E + S + + ++ DS Y+++ + +P LR S+
Sbjct: 80 GAVLVTVNTNYRAAELEYLLRQSDSTTLFLIEQYRDSSYIDILYEIVPELR-----TSAP 134
Query: 140 SDFVNKR-DMLTADILKGYSLRSLPFT--------------------HSWAPEGAVIICF 178
+KR L I G FT S P + + +
Sbjct: 135 GQLQSKRLPKLKNVIFLGDKRHPGMFTWNDILAMAHDVSEEELDERMESLDPHDVINMQY 194
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVG 237
TSGTTG PKGV++++ ++ + +G GE D P H G + S +A + VG
Sbjct: 195 TSGTTGFPKGVMLTNYNIVNNAHQVAQCMGLGEGDRLCIPVPFFHCFGCVMSTLACVTVG 254
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
A V + +F K LE VE T+L VP + +A L S++ + G
Sbjct: 255 ATMVPVVEFHPKRVLETVEAERCTALHGVPTMF--IAELNDPDFAKYDLSSLRTGIMAGS 312
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP---TLETPGQLPQAFGNVTP 354
P E+MK + AYG TE S +T DP +ET
Sbjct: 313 PCPVEVMKAVIEKMGMKDITIAYGQTEASPVITQTRTDDPLELRVET------------- 359
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSV 408
VG+ P VE+K+ G++ G + TRG HVM Y++ A
Sbjct: 360 ----------VGRALPGVEVKIVEPGTNKEVPRGVQGELCTRGYHVMKGYYNNPEATNEA 409
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ WL TGD+ ++D+ G + GR I GGEN+YP E+E L +HP I+ + VVG
Sbjct: 410 IDQDGWLHTGDLATMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVG 469
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + E V+A + L++ ++E +R+ CR N++ K PR
Sbjct: 470 VPDEVYGEEVMAWIILKDGET----------------ATAEEIREFCR-GNISRHKIPR- 511
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
++ + +P+T++GKI++ ++R
Sbjct: 512 YIEFTDSYPMTASGKIQKFKLR 533
>gi|443702072|gb|ELU00234.1| hypothetical protein CAPTEDRAFT_220839 [Capitella teleta]
Length = 603
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 148/563 (26%), Positives = 249/563 (44%), Gaps = 66/563 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R++ V + N T + + + GLL +G + GD + I A N ++++ A A +
Sbjct: 75 RDAAVFVQDNERLTFEDLLVESDTFGAGLLSLGFKPGDRIGIWAPNCKFWVIAQYATAKV 134
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDES--SDSWYL---------------ELQH 123
G I+ N + +E A+ ++ +V E+ + +Y +L+
Sbjct: 135 GLILVNFNPAYQARELEYALRKVQCRGIVAAEAFKTQDYYAILSSICPELETSEPNDLKS 194
Query: 124 TAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+P L+ + + + ++ D++T+ + R L + + V I FTSGT
Sbjct: 195 ERLPDLKSVIMISEKKFAGALSVHDVMTSGESTAFYRRLLEIQDNVQFDDPVNIQFTSGT 254
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCHIGGLSSAMAMLMVGACHV 241
TG PK V++SH ++ + + Y + + PL H G+ +V A
Sbjct: 255 TGKPKAVLLSHHNMVNNAYFCTRRLNYHQKPHRICVPVPLYHCFGMVVGSLHSIVSAATA 314
Query: 242 FIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
P F+ ++ L+++EQ TSL+ P + D+ L DS+ L GG
Sbjct: 315 VYPSNGFKPEACLKSIEQERCTSLLGTPTMFIDILNLPNFD--VYTIDSLNTGLIGGSPC 372
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P ++K+ ++ AYG TE +S LTF T D T+E
Sbjct: 373 PINVVKQIRTKLHMPEVTIAYGTTE-NSPLTFQTCQDDTVER------------------ 413
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
Q +G+P PHVE+KV V G + RG VM Y+ A V + W
Sbjct: 414 -QVSTIGRPLPHVEVKVVDREGRIVPVNTEGELCIRGYVVMHSYYQDEAATVEVLGSDRW 472
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
TGD+ ++D+ +VGR I GGEN+YP EVE VL ++ I + VVG+ + RL
Sbjct: 473 YKTGDLATMDEHSYAKIVGRIKDLIIRGGENIYPLEVEQVLYENSKIEDVQVVGVPDPRL 532
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A ++L+E Q++ E +++ C+ K L+ FK P ++ +
Sbjct: 533 QEQVCAWIKLKEG---------QTATADE-------IKEFCKGK-LSYFKIPH-YIQFVD 574
Query: 535 PFPLTSTGKIRRDEVRREVMSHL 557
FPLT +GKI++ ++R L
Sbjct: 575 AFPLTVSGKIQKYKIREMAAEQL 597
>gi|91780873|ref|YP_556080.1| acyl-CoA synthetase [Burkholderia xenovorans LB400]
gi|91693533|gb|ABE36730.1| Putative AMP-dependent synthetase and ligase [Burkholderia
xenovorans LB400]
Length = 504
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 230/511 (45%), Gaps = 70/511 (13%)
Query: 54 LRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES 113
+R GDIVA+ NS ++E +LAV+ G ++ P+NYR E + + +L DE
Sbjct: 49 IRRGDIVALLMKNSAAFVEIMLAVSQAGAVILPINYRLGPDEVAYILQHSGAKLLFHDEE 108
Query: 114 SDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA--PE 171
E+ + S G++ SD T+ + G+ P T ++ P+
Sbjct: 109 -----FEVPPGLVHS---QAVTGAAQSD--------TSVLAAGHE----PCTEAYPSRPD 148
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SA 230
+ +TSGTT PKGV+ S+ + +S IA +G +DD L PL H+G
Sbjct: 149 DLYRLMYTSGTTDRPKGVMHSYGNVAWKSFDHIAALGITKDDRLLVVGPLYHVGACDLPG 208
Query: 231 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 290
+A+L G + F++++ LEA+E+ +T P +++ + L + G S++
Sbjct: 209 LAVLAQGGMLRIMRDFDAQAVLEAIERERLTGAWLAPVMLSRILALPERYRFDLG--SLR 266
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
++ GG P + ++E + F A+ I AYG+TE+ S T M G+ G
Sbjct: 267 WVVGGGERTPEQRIREFGSLFTGARYIDAYGLTESCSGDTLME--------QGRELDKIG 318
Query: 351 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAK 405
+ G+ HV+L + SD + G I RG V YW K
Sbjct: 319 ST-------------GRALAHVQLAIMSDDGRMLAPGMQGEICVRGPKVTQGYWKD-PEK 364
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ S + W TGD+G +D+ G ++L R+ I SGGEN+ EVE V+ Q +
Sbjct: 365 TARSFVDGWFRTGDVGYMDEEGFLYLTDRKKDMIISGGENIASSEVERVIYQLAEVAEAA 424
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V+G + R E V A V LR L+ + LR HC E L GFK
Sbjct: 425 VIGAPDPRWGEQVTAVVVLRAG----------------ATLTLDALRTHC-EGRLGGFKT 467
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
PR +L R P +GK+ + +R E++
Sbjct: 468 PRQLIL-RDALPRNPSGKVLKRVLRDELLKE 497
>gi|149179825|ref|ZP_01858330.1| acyl-CoA synthase [Bacillus sp. SG-1]
gi|148852017|gb|EDL66162.1| acyl-CoA synthase [Bacillus sp. SG-1]
Length = 547
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 255/563 (45%), Gaps = 70/563 (12%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA 76
A +R++VV N + ++F +A+GL+ +GL+ G+ +A+ + N+ +L A
Sbjct: 20 AQGERDAVVYNDRNLRMSYKEFDLHCRKVAKGLMGLGLQKGEHMAVWSTNTPEWLACQFA 79
Query: 77 VAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
+G ++ +N + E + S +L+ D+ D+ Y+E+ + P L+
Sbjct: 80 TGKMGAVLVTVNTNYRTAELEYLLKQSDATTILLMDQYRDASYIEMLYEICPELKDSQPG 139
Query: 136 GSSSSDFVNKRDMLT------------ADILK-GYSLRSLPFTHSWA---PEGAVIICFT 179
S R+++ DIL+ S+ + PE + + +T
Sbjct: 140 NLESKRLPALRNVIVLSEKRYSGTYNWEDILQMAASVEETELDERMSDLHPEDVINMQYT 199
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 238
SGTTG PKGV+++H+ ++ + + +D P H G + MA + VGA
Sbjct: 200 SGTTGFPKGVMLTHNNIVNNAYNIAQCMRLTNEDRLCIPVPFFHCFGCVLGTMACVSVGA 259
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
V + +F+ + L+ V+ T L VP + +A L S++ + G
Sbjct: 260 AMVPVQEFDPGTVLQTVQDEKCTGLHGVPTMF--IAELNHPGFDQFDLSSLRTGIMAGSN 317
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQAFGNVTPN 355
P E+MK + ++ AYG TE+S +T DP +ET
Sbjct: 318 CPIEVMKGVIDRMGADEITIAYGQTESSPVITQTRTDDPIELRVET-------------- 363
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 409
VG+ P+VE+KV G+ G + TRG VM Y+ A +
Sbjct: 364 ---------VGRALPNVEVKVVQPGTDEEVPFGVQGELCTRGYLVMKGYYKNEEATAAAI 414
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ WL TGD+ +D+ G + GR I GGEN+YP E+E L HP ++ + VVGI
Sbjct: 415 DSDGWLHTGDLAVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYTHPKVLDVQVVGI 474
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ E V+A V L+E Q++ S++ LR++C+ K ++ K PR +
Sbjct: 475 PDKVYGEEVMAWVILKEG---------QTA-------SADELREYCKGK-ISRHKVPR-Y 516
Query: 530 VLWRKPFPLTSTGKIRRDEVRRE 552
+ + +P+T++GKI++ ++R+E
Sbjct: 517 IEFTDAYPMTASGKIQKYKLRKE 539
>gi|334339638|ref|YP_004544618.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
gi|334090992|gb|AEG59332.1| AMP-dependent synthetase and ligase [Desulfotomaculum ruminis DSM
2154]
Length = 554
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/553 (25%), Positives = 249/553 (45%), Gaps = 78/553 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
Q+F + +A+GL+ +G++ G+ +AI A N ++ +G ++ +N + E
Sbjct: 38 QEFNRLCRKVAKGLMALGIQKGEHIAIWATNVPEWVTLQFTTGKMGAVLVTVNTNYKSFE 97
Query: 96 -----------------ASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSS 138
++ ++ + + E D +L +P L+ + +G
Sbjct: 98 VEYLLQQSDATTLVMIGGTKTTNYLKIINELCPELKDCPPGQLNSARLPLLKNIIFIGEE 157
Query: 139 SS-DFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ +N D+L A+ + L + S P+ + + +TSGTTG PKGV+++H+ L
Sbjct: 158 AQPGMLNWNDLLELANQITDEELDAR--QASLDPDDCINMQYTSGTTGFPKGVMLTHTNL 215
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
+ + + + + E D L T P H G + M ++ GA V + F LE V
Sbjct: 216 VNNAHSIANCMAFSERDRLLITVPFFHCFGCVLGTMTCVVSGATMVPLEVFNPVRVLEIV 275
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLPSELMKEATNSFP 312
+Q T+L VP + ++ +++ KG V + G G P E+MK +
Sbjct: 276 DQERCTALHGVPTMF-----IMELEELAKGNYDVSSLRTGIMAGSPCPIEVMKAVVDRMG 330
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
++ YG TE S ++T DP + + VGK P+V
Sbjct: 331 MKEITITYGQTEASPAITMTRTDDPI--------------------ELRVATVGKVIPNV 370
Query: 373 ELKV--------CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
E K+ C G G I +RG +VM Y+ A + WL TGD+G +D
Sbjct: 371 EAKIVDPETGEDCPPGIQ--GEICSRGYNVMKGYYKMPEATAQAIDQDGWLHTGDLGIMD 428
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G + GR I GGENVYP E+E L HP I + VVG+ + + E V+A V+L
Sbjct: 429 EKGYFKITGRLKDMIIRGGENVYPREIEEFLYTHPLIKDVQVVGVPSMKYGEEVLAYVQL 488
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
RE + L+ E ++ +CR+K + +K P +VL+ +P+T++GKI
Sbjct: 489 REG----------------VTLTKEEIQDYCRDK-IAKYKIPS-YVLFIDHYPITASGKI 530
Query: 545 RRDEVRREVMSHL 557
++ ++R + ++ L
Sbjct: 531 QKYKLREQAITAL 543
>gi|423606283|ref|ZP_17582176.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD102]
gi|401241839|gb|EJR48217.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD102]
Length = 496
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 242/543 (44%), Gaps = 73/543 (13%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ + IT T +Q + V +A L+ ++ ++ G+ +AI + NS Y+ + A+A +
Sbjct: 17 DRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNSLEYIVLLFAIAKV 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I PLN R + E + +L +E+ + L + S V L S
Sbjct: 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMHKV---SYVQRVILIKSLK 133
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
+ +++ +I + S IIC+TSGTTG PKG V++ + +
Sbjct: 134 EIEDRKSDNLEEINESASF---------------IICYTSGTTGKPKGAVLTQDNMFWNA 178
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHC 259
L + D + PL HIGG+ A L G + KFE +AL +E+H
Sbjct: 179 LNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIIPRKFEPTTALSMIEKHK 238
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI-S 318
VT ++ VP I L + + T SV+ NGG P ELM+E + + L
Sbjct: 239 VTVVMGVPTIHQALMNCEKFETT--NLQSVRWFYNGGAPCPEELMREFID---RGFLFGQ 293
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
+GMTETS ++ ++ D + +GKP E ++
Sbjct: 294 GFGMTETSPTVFMLSEEDARCKVGS---------------------IGKPVLFCEYELID 332
Query: 379 DGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ + VG +L RG +VM YW++ A K ++ G WL TGD+ +D+ G V++V
Sbjct: 333 ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATKEAIQDG--WLYTGDLARVDEDGFVYIV 390
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR+ I SGGEN+YP EVE V+ + + + VVG R+ +W E
Sbjct: 391 GRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG----------------RQHVKWGE 434
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
+ K +L+ + + +HCR L +K P+ V + P +TGKI++ ++ +
Sbjct: 435 TPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIPKEIVFLEE-LPKNATGKIQKAQLANQ 492
Query: 553 VMS 555
+ S
Sbjct: 493 LKS 495
>gi|229090943|ref|ZP_04222167.1| Feruloyl-CoA synthetase [Bacillus cereus Rock3-42]
gi|228692344|gb|EEL46079.1| Feruloyl-CoA synthetase [Bacillus cereus Rock3-42]
Length = 496
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 251/553 (45%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ E+ ++ G+ +AI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +++ + L +Q +
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS------ 121
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+V + +T+ LK R + + IIC+TSGTTG PKG V+
Sbjct: 122 ----------YVQRVISITS--LKEIEDRKIDNFVEINESASFIICYTSGTTGKPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTK 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
E ++ + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCEYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGDLARV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A +
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L+ +V+ +HCR L +K P+ +++ K P +TGK
Sbjct: 441 --------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLTNQLKSR 496
>gi|410862984|ref|YP_006978218.1| AMP-binding protein [Alteromonas macleodii AltDE1]
gi|410820246|gb|AFV86863.1| AMP-binding domain protein [Alteromonas macleodii AltDE1]
Length = 579
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 242/554 (43%), Gaps = 70/554 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T +++ + +A GLL G+ GD V I S N EW + +A A IG I+ LN +
Sbjct: 59 TYKEYWLQIERVACGLLANGVEPGDRVGIWSPNNIEWSIVQ-MATARIGAIMVCLNPAYR 117
Query: 93 FKEASRAITSIRPVMLV---------------------TDESSDSWYLELQHTAIPSLRW 131
E + AI +++ LV D+ +DS L + +PSL++
Sbjct: 118 PDELAFAINNVQVKYLVMAQSFKQSNYVAMLKELAPEIEDDRNDSLAQPLSLSMLPSLKF 177
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++G+ D + L + + ++ + + + I FTSGTTG+PKG +
Sbjct: 178 IYTIGNQPVDRLLPFSALQREPTESLRIKLTEIEAELSADDNINIQFTSGTTGNPKGATL 237
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESK 249
+H ++ L + + D PL H G+ + L GAC VF + F +
Sbjct: 238 THRNILNNGLLVAQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPGESFAPE 297
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L VE+ T+L VP + L K+ +++ + G P ELM++ +
Sbjct: 298 TTLRTVEEEKCTALHGVPTMFIAELELPNFKEF--DLSTLRTGVMAGSTCPEELMRKVHS 355
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
F +++ YG TE S + +T D E Q VG+
Sbjct: 356 EFNMTEVVIGYGQTE-CSPINHITDIDSPFEK-------------------QVKTVGRAM 395
Query: 370 PHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
PH E+K+ + + G I +G VM YW + E WL +GD+G +D
Sbjct: 396 PHTEVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGDEAKTKATIDDEGWLHSGDLGEMD 455
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V +VGR I GGEN+YP E+E VL QH + V GI + R E V ++
Sbjct: 456 DEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDVSDAAVFGIPDDRYGEQVCLWIKA 515
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+E+ E E +R++ + K L FK P+ ++ + +P+T TGK+
Sbjct: 516 KENRHIDE----------------EKIREYLKSK-LAYFKVPK-YINVVQDYPMTVTGKL 557
Query: 545 RRDEVRREVMSHLK 558
++ ++R ++ LK
Sbjct: 558 QKFKMREHMIETLK 571
>gi|403722609|ref|ZP_10945108.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403206504|dbj|GAB89439.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 543
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 232/548 (42%), Gaps = 65/548 (11%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAF 79
+++ R T +F +DV LA GLL +G+ +GD V + A N EW+L A A
Sbjct: 36 ALIDAAAGRQWTYTEFHRDVRALAAGLLRLGVTTGDRVGLWAPNR---FEWVLTQYATAE 92
Query: 80 IGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSL 135
IG I+ LN + E A+ S + + DS Y + A P LR V
Sbjct: 93 IGAILVNLNPAYRQNEIEYALGQSEIGFVFAAERFKDSAYASMLAEARPNCPDLREVVLF 152
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
+ + L AD R S P+ + I +TSGTTG PKG ++H
Sbjct: 153 EAP------EWTALLADPTADELARVAEIGASLTPDDPINIQYTSGTTGFPKGATLTHRN 206
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKSALE 253
+ ++ Y + D P H G + +A GA V P F+ + L
Sbjct: 207 IANNGYLVGELINYTDADRICLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPAATLR 266
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSF 311
AV ++ TSL VP + L+ D S++ + G P M++ +
Sbjct: 267 AVSEYRCTSLYGVPTMFIAELALLDSHGDASDYDLSSLRTGIMAGSPCPEHTMRQVVDRM 326
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T + DP G VG+ PH
Sbjct: 327 HMREVSICYGMTETSPVSTQTRIDDPLELRVG--------------------TVGRVGPH 366
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV + G TRG VM YW+Q + W+ TGD+ +DD
Sbjct: 367 LEIKVVDPATGETLRRGETGEFCTRGYSVMKGYWNQPEKTAEAIDTDGWMHTGDLAVMDD 426
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR + GGEN+YP E+E L HP I+ V+G+ +A+ E ++A VRLR
Sbjct: 427 NGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMAWVRLR 486
Query: 486 ESW-QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ ++E + + + K + +H K PR +V K FP+T TGK+
Sbjct: 487 DGVSDFTEDDLREFATGK--------IARH---------KIPR-YVHVVKDFPMTVTGKV 528
Query: 545 RRDEVRRE 552
R+ ++R E
Sbjct: 529 RKVQMRAE 536
>gi|332534272|ref|ZP_08410116.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036268|gb|EGI72740.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 577
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/549 (25%), Positives = 249/549 (45%), Gaps = 66/549 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++V LA GLL +G++ G+ V I S N EW L A A IG I+ +N +
Sbjct: 64 TYKEFQKEVNQLAMGLLALGVKPGERVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYR 122
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ S+ L+T + S YLE L A+P+L+ + +
Sbjct: 123 PNELQYALNSVECSTLITASNFKGSDYLEMLNCLAPELATCDKYTLNLKALPTLKNIIRI 182
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G +S ++ + + + L + + + I FTSGTTG+PKG ++H
Sbjct: 183 GDEASPGMHSFNDVINLPTAAHELELKAIGENLNADQDINIQFTSGTTGNPKGATLTHKN 242
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALE 253
++ +L + + DD PL H + + + P F++K+ L+
Sbjct: 243 ILNNALFVAESMHFTSDDKLCIPIPLYHCFAMVLGSLLCVSKGAAAIYPSDSFDAKTTLD 302
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
V+Q T+L VP + ++ L T +++ + G P ++M++
Sbjct: 303 VVQQEGCTALHGVPTMF--ISELELSNFTDYDLSTLRTGVMAGSTCPEQVMRKVQTQMNM 360
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ AYG TE S + +T D ++E Q VG+ H E
Sbjct: 361 HQVLIAYGQTE-CSPINNITETDSSIER-------------------QVTTVGRALAHTE 400
Query: 374 LKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
+K+ + + G + ++GA +M YW+ + GE WL +GD+G +D G
Sbjct: 401 VKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDEAKTKATIDGEGWLHSGDLGVMDTEGF 460
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
V +VGR I GGEN+YP E+E VL +PGI + GI + + E V A ++ +E
Sbjct: 461 VTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKYGEEVCAWIQPKE-- 518
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
+ +L+ + +R+ ++K L FK PR + + + +P+T TGK+++ +
Sbjct: 519 --------------DAVLNEQAIREFLKDK-LAYFKMPR-HIRFVENYPMTVTGKLQKFK 562
Query: 549 VRREVMSHL 557
+R ++ L
Sbjct: 563 MREQMQEEL 571
>gi|303246537|ref|ZP_07332816.1| AMP-dependent synthetase and ligase [Desulfovibrio fructosovorans
JJ]
gi|302492247|gb|EFL52122.1| AMP-dependent synthetase and ligase [Desulfovibrio fructosovorans
JJ]
Length = 557
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 252/557 (45%), Gaps = 70/557 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ +VV + + T +QF + +LA+GLL +G++ G+ VA+ A N +++ + A A +
Sbjct: 32 QEAVVYVDRDYRLTWRQFDELTDDLAKGLLALGIQKGEKVAVWATNVPFWVALMFATAKM 91
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E +T S + +T+ DS Y+E+ + P LR S
Sbjct: 92 GAVLLTVNTAYKRNELKYLMTNSEAENIFITNGFRDSDYIEILYDLAPELRTMQRGAVRS 151
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWA---------PEGAVIIC-------FTSGTT 183
F + + + + K + S+P A A C +TSGTT
Sbjct: 152 ETFPHLKRVCFLGVEKHRGMYSIPEILGLARTVTDEDLRARQATFTCHDVVNMQYTSGTT 211
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF 242
G PKGV++SH ++ + + D PL H G + MA + G VF
Sbjct: 212 GFPKGVMLSHHNIVNNGYSIGQRQRFTNKDKLCVQVPLFHCFGCVLGVMACVNHGTTMVF 271
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
F ++ ++EQ T++ VP + I K + D S++ + G P
Sbjct: 272 TEVFNPIHSMMSIEQEKCTAIYGVPTMF----IAILEHKLFPKFDFSSLRTGIMAGSVCP 327
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
++ M++ T ++ S YG+TE+S +T + DP ++
Sbjct: 328 TQTMRQVTEKMYMKEITSVYGLTESSPGMTQTDVTDPYH------------------YRV 369
Query: 361 QGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+GV G+ PHVE+KV +D + V G + RG + M Y++ A +
Sbjct: 370 EGV--GRAFPHVEVKV-ADPETGVEMERGKQGELCCRGYNTMKGYYNNPEATAKCIDKDG 426
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL +GD+G +D+ G V + GR I GGEN+YP E+E L PGI + V G+ + +
Sbjct: 427 WLHSGDLGVMDEFGYVAITGRIKDMIIRGGENIYPREIEEYLYTMPGIADVQVAGVPSRK 486
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A + LR K++ + E +R CR + + K P+ ++ +
Sbjct: 487 YGEEVGAYIILR----------------KDVAMEPEEVRDFCRGQ-IAWHKIPK-YIAFV 528
Query: 534 KPFPLTSTGKIRRDEVR 550
K FPLT++GK+++ ++R
Sbjct: 529 KEFPLTTSGKVQKYKLR 545
>gi|421889438|ref|ZP_16320475.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
gi|378965202|emb|CCF97223.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum K60-1]
Length = 571
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 256/552 (46%), Gaps = 93/552 (16%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAIT 101
LA GL +GL+ GD + I + N EW+L A A +G I+ +N + E A+
Sbjct: 68 LAAGLHALGLQRGDRIGIWSPNR---YEWVLTQFATARLGLILVNINPAYRLAELEYALN 124
Query: 102 SIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSSSS---- 140
+ +V E+ S YLE LQ +P+LRW + +G ++
Sbjct: 125 KVGCKAIVAAEAFKTSRYLEMLQTLAPELATAQPGALQAAKLPALRWVIRMGEGATPGMI 184
Query: 141 ---DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
+ + + ++AD L + + +P+ A+ I FTSGTTG+PKG ++H ++
Sbjct: 185 NFGEVIARGQGVSADTLDAIA-------AALSPDDAINIQFTSGTTGAPKGATLTHVNVV 237
Query: 198 VQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESKSALEA 254
+ +A+ G D + + PL H G+ S +A GAC VF + F+ + L
Sbjct: 238 NNARFVAMAMNLQGTDRLCI-PVPLYHCFGMVMSVLACTATGACMVFPGEAFDPLATLRT 296
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
V + T+L VP + +A L + ++G D S++ + G P E+MK
Sbjct: 297 VAEERCTALHGVPTMF--IAQLDHPE--FRGFDVSSLRGGIMAGSPCPIEVMKRVVAEMH 352
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
++ AYGMTETS P +F + + + + + VG+ PH+
Sbjct: 353 LREITIAYGMTETS-------------------PVSFQSAVTDPLDK-RVTTVGRIQPHL 392
Query: 373 ELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
++K+ DG+ V G + T+G VML YWD AK + S + W+ TGD+ + D
Sbjct: 393 QVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESIHDGWMRTGDLATFDAD 450
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP + + V G+ + + E V A + L+
Sbjct: 451 GYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIVLKP 510
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
Q +E E +R C + + +K PR ++ + P+T TGK+++
Sbjct: 511 GQQATE----------------EEIRAFC-QGQIAHYKIPR-YICFVPEMPMTVTGKVQK 552
Query: 547 DEVRREVMSHLK 558
+R ++ LK
Sbjct: 553 FIMRERMIEALK 564
>gi|228927023|ref|ZP_04090089.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832758|gb|EEM78329.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 496
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 250/557 (44%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ E+ + G+ +AI + NS
Sbjct: 4 IAYWIEKWAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELHVEKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A +G I PLN R + E + +L +E+ Y+ L +
Sbjct: 64 LEYIVLLFAIAKVGCIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQ--YMALSMQKVS 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
++ +S+ S LK R + + IIC+TSGTTG PK
Sbjct: 122 YVQRVISITS----------------LKEIEDRKIDNFVEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQRVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K P
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLVNQLKSR 496
>gi|138894834|ref|YP_001125287.1| long-chain-fatty-acid--CoA ligase [Geobacillus thermodenitrificans
NG80-2]
gi|134266347|gb|ABO66542.1| Long-chain-fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
Length = 524
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 244/531 (45%), Gaps = 48/531 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV + R T ++ +V A LE G+R GD V+ N+ + A A I
Sbjct: 19 REAVVEVATGRRYTYAEWEVEVNRWANAFLEAGVRKGDRVSTVLYNTLELATALFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G + P+N+R +E + + P +++ + S +E Q AI S HVS S
Sbjct: 79 GAVFNPINFRLKAEEIAYILMDAEPKIVIFERS-----VEPQLAAISSRFPHVSFWSIDG 133
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
D +++ + P H + I+ +TSGTTG PKGV+ H +I QS
Sbjct: 134 DPPPFAKNAYEQVVQ--ATDEAPHVHVEESDLYAIM-YTSGTTGRPKGVMHRHRDMIEQS 190
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHC 259
+ ++ E D L APL H L + + GA V + F++K LE +E+
Sbjct: 191 VVCQGVMRIRETDRGLAAAPLFHCAELHCCLLPRVHAGAASVILHHFDAKLVLETIERER 250
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLI 317
+T + P + + +++ G D S++ L G + L+++ LI
Sbjct: 251 ITLMFGAPTMWNMI-----LQENVSGYDISSLRLGLYGAAPMAPALVRQCQERL-GIGLI 304
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYGMTE ++TF+ L D L+ G +A N H+ + V + P V
Sbjct: 305 QAYGMTEMGPAVTFL-LEDEQLKKAGSAGRACVN------HEIRVVRAREDGPSDPDDVL 357
Query: 378 SDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
G VG I+ RG +M Y+ + A + ++ G W +GD+G +D+ G +++ R +
Sbjct: 358 PPGE--VGEIVMRGPCMMAGYYKREEATEKALYKG--WYHSGDLGYVDEDGYLYVADRVD 413
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
I SGGENVYP EVE VL +HPG++ + V+G + E VVA V
Sbjct: 414 DMIISGGENVYPREVEDVLYEHPGVLDVAVLGEPDELWGEKVVAFV-------------- 459
Query: 497 QSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ LL+++ L Q C+ + L +K PR + P ++GKI++
Sbjct: 460 ---VKKDALLTADELEQFCKTSDRLAPYKRPRAYYFI-DVLPRNASGKIQK 506
>gi|444424341|ref|ZP_21219799.1| AMP-binding domain protein [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444242336|gb|ELU53850.1| AMP-binding domain protein [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 563
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 250/566 (44%), Gaps = 69/566 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ ++V+I N+ + Q+ V LA GLL IG++ GD VAI A N +EW + A
Sbjct: 37 KEALVSIHQNKRMSYQELNTKVNQLASGLLSIGVKEGDRVAIWAQNC---IEWTITQYAT 93
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRWHVSLG 136
A IG I+ +N + E A+ + V+++T S Y+EL IP L S
Sbjct: 94 AKIGAILVCINPAYKSLELEYALKKVNCSVLIMTRGFKGSNYIELIKQLIPQLGEQESNH 153
Query: 137 SSSSDFVNKRDMLTADILKG---YSLRSLPFTHSWAPEGAVIIC------------FTSG 181
+ +S + + ++ D K YS R L + IC FTSG
Sbjct: 154 AETSKLPSLKSLVLIDERKEKGFYSFRDLFLQDERGIKKVRTICASLRCDQPINIQFTSG 213
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACH 240
TTGSPKG ++H ++ + + + E D PL H G+ + L GAC
Sbjct: 214 TTGSPKGATLTHFNILNNAFSIADKLAMDERDRLCIPVPLYHCFGMVGGNLTCLTAGACA 273
Query: 241 VFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
+ + F+ L+ +E T L VP + +A L + + +++ G
Sbjct: 274 ILCGESFDPLDTLKTIETESCTVLHGVPTMF--IAQLRNPELSNFNLSTLRTGAIAGATC 331
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P +L+ E L+ AYG TETS ++ DP Q
Sbjct: 332 PEDLIIEVQEKMHMDDLLIAYGQTETSPLSCMLSPQDPI--------------------Q 371
Query: 360 PQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+ VG+ H E+KV + +G+ + +G + TRG VML YW+ + E W
Sbjct: 372 KRLSTVGQVLRHTEVKVINLNGNIAERNTIGELCTRGYCVMLGYWNDEEKTSNTIDSEGW 431
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L +GD+ +DD G + +VGR I GGEN++P ++E VL I + V G+A+
Sbjct: 432 LHSGDLAVMDDEGYLSIVGRSKDLIIRGGENIFPRDIEDVLHGLETIEDVAVFGVADDYY 491
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A ++L + + SE + ++ + E+ + FK P + K
Sbjct: 492 GEKVCAWIKLAQGHKVSEDD----------------IKVYLSER-IAHFKVPSVIRFVDK 534
Query: 535 PFPLTSTGKIRRDEVRREVMSHLKSL 560
FPLT TGK+++ ++R + S +S+
Sbjct: 535 -FPLTVTGKLQKYKMREFMESEQRSM 559
>gi|407701339|ref|YP_006826126.1| AMP-binding protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407250486|gb|AFT79671.1| AMP-binding domain protein [Alteromonas macleodii str. 'Black Sea
11']
Length = 579
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 152/556 (27%), Positives = 244/556 (43%), Gaps = 74/556 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLN--YR 90
T QQ+ +V +A GLL G+ GD V I S N EW + +A A IG I+ LN YR
Sbjct: 59 TYQQYWDEVERVACGLLGNGVEPGDRVGIWSPNNIEWSIVQ-MATARIGAIMVCLNPAYR 117
Query: 91 -------------------WSFKEASRA--ITSIRPVMLVTDESSDSWYLELQHTAIPSL 129
SFK+++ + + P + D+++ S L L + +PSL
Sbjct: 118 PDELAFAINNVAVKYLVMAQSFKQSNYVAMLKELAPEIDGKDDTASSTPLSL--SKLPSL 175
Query: 130 RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGV 189
+ ++G + + L + + + L +P+ + I FTSGTTG+PKG
Sbjct: 176 KHVYTIGDKPVEGLQAFSALQIEPTEALKSQLLAIESKLSPDDNINIQFTSGTTGNPKGA 235
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FE 247
++H ++ L + + D PL H G+ + L GAC VF + F+
Sbjct: 236 TLTHRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPGESFD 295
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
++ L VE+ T L VP + L + +++ + G P ELM++
Sbjct: 296 PETTLRTVEEEKCTGLHGVPTMFIAELELPNFRDF--DLSTLRTGVMAGSTCPEELMRKV 353
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+ F +++ YG TE S + +T D E Q VG+
Sbjct: 354 HSEFHMTEVVIGYGQTE-CSPINHITDIDSPFEK-------------------QVKTVGR 393
Query: 368 PAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH E+K+ + V G I RG VM YW + + E WL +GD+G
Sbjct: 394 AMPHTEVKIIDAQGNTVSIGEPGEICARGYCVMKGYWGDEVKTKATIDDEGWLHSGDLGE 453
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D+ G V +VGR I GGEN+YP E+E VL QH + V GI + + E V +
Sbjct: 454 MDEEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHQDVSDAAVFGIPDNKYGEQVCLWI 513
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
+ +E+ E E +R + + K L FK P+ ++ K +P+T TG
Sbjct: 514 KAKENRHIDE----------------EQIRDYLKSK-LAYFKVPK-YISVVKEYPMTVTG 555
Query: 543 KIRRDEVRREVMSHLK 558
K+++ ++R ++ LK
Sbjct: 556 KLQKFKMREYMIETLK 571
>gi|385330740|ref|YP_005884691.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
gi|311693890|gb|ADP96763.1| acyl-CoA synthase [Marinobacter adhaerens HP15]
Length = 548
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 244/551 (44%), Gaps = 80/551 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGIVAPLNYRWS 92
T ++FV+ V AR + IG++ GD V I + N EW + A A +G I+ +N +
Sbjct: 35 TYKEFVEKVDEAARAFMAIGVKRGDRVGIWSPNRYEWTVTQ-FATAKVGAILVNINPAYG 93
Query: 93 FKEASRAITSIRPVMLVT-DESSDSWYLELQHTAIPSLRWHVSLGSSSSDFV-------- 143
E A+ LVT D S Y E+ + P L+ S G +D V
Sbjct: 94 VHELQYALNLAGITTLVTADSFKASNYREMIYELAPELK-RSSPGKLKADHVPELRAVIN 152
Query: 144 ---NKRD-MLTADILKGYSLR-----------SLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+K D M T G+S L F + + I FTSGTTG+PKG
Sbjct: 153 VHEDKHDGMWTWKEFLGFSSDVSQDDLVKRQGELQF------DDPINIQFTSGTTGNPKG 206
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPK-F 246
++H ++ E D + PL H G + + + G+ ++ + F
Sbjct: 207 ATLTHHNILNNGYFVGESQLLTEKDRLVIPVPLYHCFGMVMGNLGCITHGSTMIYPGEGF 266
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E KS L+AV Q T+L VP + +A L + S++ + G P+E+MK+
Sbjct: 267 EPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSSLRTGIMAGSICPAEVMKK 324
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
++ AYGMTETS T + DP + Q VG
Sbjct: 325 VNGKMNMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTVG 364
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E K+ G+ +V G + TRG VML+YW+ W+ TGD+
Sbjct: 365 RTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTREAIDSAGWMHTGDL 424
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++D+ G V +VGR + GGEN+YP+E+E L HP I + V GI + + E ++A
Sbjct: 425 ATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELIA 484
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V+L D + +++E L+ C+ K + FK P+ + + FP+T
Sbjct: 485 WVKLAP---------DAAP------VTAEDLQAFCKGK-IAHFKIPKNYKFVDE-FPMTV 527
Query: 541 TGKIRRDEVRR 551
TGKI++ ++R
Sbjct: 528 TGKIQKFKMRE 538
>gi|358448423|ref|ZP_09158927.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
gi|357227520|gb|EHJ05981.1| AMP-binding domain protein [Marinobacter manganoxydans MnI7-9]
Length = 562
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 156/551 (28%), Positives = 244/551 (44%), Gaps = 80/551 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAFIGGIVAPLNYRWS 92
T ++FV+ V AR + IG++ GD V I + N EW + A A +G I+ +N +
Sbjct: 49 TYKEFVEKVDEAARAFMAIGVKRGDRVGIWSPNRYEWTVTQ-FATAKVGAILVNINPAYG 107
Query: 93 FKEASRAITSIRPVMLVT-DESSDSWYLELQHTAIPSLRWHVSLGSSSSDFV-------- 143
E A+ LVT D S Y E+ + P L+ S G +D V
Sbjct: 108 VHELQYALNLAGITTLVTADSFKASNYREMIYELAPELK-RSSPGKLKADHVPELRAVIN 166
Query: 144 ---NKRD-MLTADILKGYSLR-----------SLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+K D M T G+S L F + + I FTSGTTG+PKG
Sbjct: 167 VHEDKHDGMWTWKEFLGFSSDVSQDDLVKRQGELQF------DDPINIQFTSGTTGNPKG 220
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPK-F 246
++H ++ E D + PL H G + + + G+ ++ + F
Sbjct: 221 ATLTHHNILNNGYFVGESQILTEKDRLVIPVPLYHCFGMVMGNLGCITHGSTMIYPGEGF 280
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E KS L+AV Q T+L VP + +A L + S++ + G P+E+MK+
Sbjct: 281 EPKSVLQAVHQEKATALYGVPTMF--IAELAEPEFETYDLSSLRTGIMAGSICPAEVMKK 338
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
++ AYGMTETS T + DP + Q VG
Sbjct: 339 VNGKMNMKEVQIAYGMTETSPVSTQTSSLDP--------------------FEKQVTTVG 378
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E K+ G+ +V G + TRG VML+YW+ W+ TGD+
Sbjct: 379 RTQPHLETKIVDPGTGNVVPRGEIGELCTRGYSVMLKYWNNEEKTREAIDSAGWMHTGDL 438
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++D+ G V +VGR + GGEN+YP+E+E L HP I + V GI + + E ++A
Sbjct: 439 ATMDEEGYVQIVGRIKDMVIRGGENIYPKEIEEFLYTHPAIEEVQVTGIPDDKYGEELIA 498
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V+L D + +++E L+ C+ K + FK P+ + + FP+T
Sbjct: 499 WVKLAP---------DAAP------VTAEDLQAFCKGK-IAHFKIPKNYKFVDE-FPMTV 541
Query: 541 TGKIRRDEVRR 551
TGKI++ ++R
Sbjct: 542 TGKIQKFKMRE 552
>gi|225863891|ref|YP_002749269.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB102]
gi|229184166|ref|ZP_04311375.1| Feruloyl-CoA synthetase [Bacillus cereus BGSC 6E1]
gi|376265823|ref|YP_005118535.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus F837/76]
gi|225789846|gb|ACO30063.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB102]
gi|228599281|gb|EEK56892.1| Feruloyl-CoA synthetase [Bacillus cereus BGSC 6E1]
gi|364511623|gb|AEW55022.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus F837/76]
Length = 496
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 252/557 (45%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ E+ ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIDNFVEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K P
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLVNQLKSR 496
>gi|291454988|ref|ZP_06594378.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|421742720|ref|ZP_16180829.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
gi|291357937|gb|EFE84839.1| acyl-CoA synthetase [Streptomyces albus J1074]
gi|406688858|gb|EKC92770.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Streptomyces
sp. SM8]
Length = 541
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 168/559 (30%), Positives = 238/559 (42%), Gaps = 73/559 (13%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L+R A R ++V + R T +F +DV LAR LL G+ GD V I A N
Sbjct: 30 LARTVAAHPDREALVDVASGRRWTYARFAEDVERLARALLARGVLKGDRVGIWATNCP-- 87
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT---DESSDSWYLELQ-H 123
EW+L A A IG I+ +N + E + + +LV ++D L +
Sbjct: 88 -EWVLVQYATARIGAIMVNINPAYRAHELAYVLRQSGTGLLVATPGHRTNDFRALVNEVR 146
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P+LR LG S + A + R + + + I +TSGTT
Sbjct: 147 EECPALRETAYLGEES--WAALLAAADACPPDALAAREAELSC----DDPINIQYTSGTT 200
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ VGY E D P H G+ +A GAC V
Sbjct: 201 GFPKGATLSHHNILNNGYFVGENVGYTEQDRICLPVPFYHCFGMVMGNIAATTHGACIVI 260
Query: 243 I-PKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGGG 298
P F+ + L AV Q TSL VP + +LA T S++ + G
Sbjct: 261 PGPVFDPVTTLTAVAQERCTSLYGVPTMFIGELNLADFASYDLT-----SLRTGIMAGSP 315
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
P E+MK A++ YGMTETS P + +S+
Sbjct: 316 CPEEVMKRVVAEMHMAEVSICYGMTETS-------------------PVSTQTRRDDSLA 356
Query: 359 QPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
G VG+ PH+E+KV G+ G + TRG VML YW++
Sbjct: 357 HRTGT-VGRVLPHLEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPERTAEAVDPA 415
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGD+ + G V +VGR I GGEN+YP E+E L HP I + VVG+ +
Sbjct: 416 GWMHTGDLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADVQVVGVPDG 475
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVL 531
+ E V+ACV K L+ E LR CR++ L +K P RL +L
Sbjct: 476 KYGEEVLACV---------------IPKQNAGPLTLEELRAFCRDR-LAHYKVPSRLQLL 519
Query: 532 WRKPFPLTSTGKIRRDEVR 550
FP+T +GK+R+ E+R
Sbjct: 520 --DAFPMTVSGKVRKIELR 536
>gi|384044522|ref|YP_005492539.1| fatty-acid--coa ligase transmembrane protein [Bacillus megaterium
WSH-002]
gi|345442213|gb|AEN87230.1| Putative fatty-acid--coa ligase transmembrane protein [Bacillus
megaterium WSH-002]
Length = 528
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 250/555 (45%), Gaps = 66/555 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ +V+ N T +F Q+ +A+ LL GL+ GD +AI A N +L A A I
Sbjct: 23 QEAVIYSEQNIRYTYAEFYQETSRVAKALLATGLKKGDHIAIWATNVPEWLLLQFAAARI 82
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLEL----QHTAIPSLRWHVSL 135
G ++ LN + E ++ S + DE + Y + +H +P L+ ++L
Sbjct: 83 GAVLVTLNTSYQSSELEYVLSHSDTAALFFIDEFKSTSYTSIITGIEHN-LPKLKHLINL 141
Query: 136 GSSS-----SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
SS ++F+ M++ ++L + S + + +TSGTTG PKGV+
Sbjct: 142 SGSSEHTSWNEFLMSSSMVSDEVLDKHE-------QSLHIHEVINMQYTSGTTGFPKGVM 194
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESK 249
+SH ++ + +D P H G + +A + VGA + I +F+
Sbjct: 195 LSHHNIVNNGFLVAQSMKLTNEDRLCIPVPFFHCFGCVLGVLACVSVGATMLPIIEFQPS 254
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
S L VE+ T+L VP + +A L ++ +++ + G P+E+MK N
Sbjct: 255 SVLRTVEKEKCTALHGVPTMF--IAELNALEFNQYDLSTLRTGIMAGSNCPAEVMKRVIN 312
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ AYG TETS +T TP + + VGK
Sbjct: 313 DMGINEITIAYGQTETSPVIT--------------------QTTPTDSIERRVQTVGKVH 352
Query: 370 PHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
HV++++ + + G + +G M Y+ + + + E WL TGD+ +I
Sbjct: 353 DHVQIQIINPVTGKQASFGEQGELCAKGYLTMKGYY-KMPEETEKTIVEGWLHTGDLATI 411
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G V + GR I GGEN+YP E+E L + P + + +VGI + + E V AC++
Sbjct: 412 DKDGYVKITGRLKDMIIRGGENIYPREIEEFLYRIPEVEDVQIVGIPDPKYGERVAACIK 471
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L++ L+++ ++ C+ K L FK P + + FP+T++GK
Sbjct: 472 LKQHS----------------FLTAQEIKDFCKGK-LAHFKIPE-HIYFIDDFPMTASGK 513
Query: 544 IRRDEVRREVMSHLK 558
I++ +++ ++++ K
Sbjct: 514 IQKYKLKEKIIALYK 528
>gi|56962365|ref|YP_174090.1| AMP-binding protein [Bacillus clausii KSM-K16]
gi|56908602|dbj|BAD63129.1| long-chain-fatty-acid--CoA ligase [Bacillus clausii KSM-K16]
Length = 545
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 150/567 (26%), Positives = 262/567 (46%), Gaps = 68/567 (11%)
Query: 13 LSRIAAVKRNSVVTITGNRHN--TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R+A ++ + +RH + + F LA+G +++G++ G+ +A+ A N +
Sbjct: 12 LERMAEESPSTEALVYPDRHLRLSYKDFNHSCRQLAKGFMQLGIQRGEHMAVWATNCPEW 71
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL 129
+ A +G ++ +N + E + + S +LV + + YLE+ + IP L
Sbjct: 72 VTTQFATGKMGAVLVTVNTNYQQSELAYLLKQSDTTTLLVMEGYKGTSYLEMLYRLIPEL 131
Query: 130 RWHVSLGSSSSDFVNKRDM------------LTADILK-GYSLRSLPFTHSWAP---EGA 173
+ S++F + + L DI+K G + + + A
Sbjct: 132 QTAEPGKLESAEFPYLKHIVYLGKERKPGMWLYDDIVKMGDQVTDAALDRLMSELDVDDA 191
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMA 232
+ + +TSGTTG PKGV+++H LI + A + + D P H G + +A
Sbjct: 192 INMQYTSGTTGFPKGVMLTHRNLIHNASNIAACMELSQQDRLCIPVPFFHCFGCVLGTLA 251
Query: 233 MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKK 291
+ V A V + +F + L V+ T+L VP + +A+L +R T+ S++
Sbjct: 252 CVSVAATMVPVEEFHPEKVLHTVQAEKCTALHGVPTMFIAELN--LRTFDTYD-LSSLRT 308
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+ G P E+MK+ ++ AYG TE+S +T T D +LE
Sbjct: 309 GIMAGSNCPVEVMKDVIEKMGITEITIAYGQTESSPVIT-QTRVDDSLER---------- 357
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLAK 405
+ VG+ P+VE+K+ D V G +LTRG HVM Y+ Q
Sbjct: 358 ---------RTDTVGRALPNVEVKIVDPDTQEEVAAGVQGELLTRGYHVMKGYYKQPEET 408
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
V TG+ WL TGD+ +D+ G + GR I GGEN+YP E+E L HP I+ +
Sbjct: 409 AKVLTGDGWLHTGDLAIMDEDGYCKITGRLKDMIIRGGENIYPREIEEFLYTHPSILDVQ 468
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
VVG+ + + E+V A +RL+ D S L++ ++ +C+ + FK
Sbjct: 469 VVGLPDPKYGEIVSAWIRLK---------ADHS-------LTAAEVQDYCK-GQIAHFKI 511
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRRE 552
P++ V + FP+T++GK+++ ++R +
Sbjct: 512 PQV-VEFVDHFPMTASGKVQKFKLREQ 537
>gi|424859031|ref|ZP_18283045.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356661540|gb|EHI41851.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 511
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 155/559 (27%), Positives = 245/559 (43%), Gaps = 70/559 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + + I + T +Q V + GL +G+RSGD + + A N
Sbjct: 2 YLTQGLHRSVQQNPDGIAVIGESGDVTFRQLEGRVARIGGGLRGLGVRSGDRIGMLATNC 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+E+ A +IG + +P+N RWS E I +L D + LEL+ P
Sbjct: 62 AQYVEFTFACPWIGAVASPVNNRWSLDEMVFQIEDAGISVLFVDAPRLAQALELRDRC-P 120
Query: 128 SLRWHVSLGSS--SSDFVNKRDMLTADILKGYSLRSLPFTHSWA-PEGAVIICFTSGTTG 184
L + + +S V+ ++ + S P + A P+ ++ +T GTTG
Sbjct: 121 LLETVICFDGTAPTSGVVDYERLIDS---------SEPVSDVRADPDSLAVLMYTGGTTG 171
Query: 185 SPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
PKGV++S ++ + +A VG+ + LH APL H+ + + M+GA HV I
Sbjct: 172 RPKGVMLSARQILTSAFGALASVGFPNAAERCLHIAPLFHLAAFAGMIQQSMLGATHVVI 231
Query: 244 PKFESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+F + +E + +T VP + M D A ++T S++ I G +P
Sbjct: 232 GEFTVEGLVETIAAKQITMTTLVPTMVPWMLDYA-----ERTGASLGSLRYIGYGAAPMP 286
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD-------PTLETPGQLPQAFGNVT 353
++ + P KL YGMTE T + D L + G+ V
Sbjct: 287 EAVLTRLLAALPHVKLRQGYGMTELGPVATILRDEDHHDRDHPERLRSVGRAAAHAEVVV 346
Query: 354 PNS--VHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
N V QP+G VG ++ RGAHVM+ YW+ L + +
Sbjct: 347 VNKAGVEQPRG--------------------KVGEVVVRGAHVMIGYWNN-LGETQKALQ 385
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
+ W+ TGD+G +D+ G ++LV R I SGGENVY EVEAV+ +H I V+G+ +
Sbjct: 386 DGWMHTGDMGYMDEHGYLFLVDRLKDMIVSGGENVYSAEVEAVIHRHEAIASCAVIGVPD 445
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
E V A V L ++ E LR + E+ + +KAPR V
Sbjct: 446 EVWGERVHAVVVLVPGAS----------------VTPEELRDYVGER-IARYKAPRT-VE 487
Query: 532 WRKPFPLTSTGKIRRDEVR 550
+ PL+ GKI + +R
Sbjct: 488 FIDQMPLSPVGKILKRTLR 506
>gi|332142719|ref|YP_004428457.1| AMP-binding domain-containing protein [Alteromonas macleodii str.
'Deep ecotype']
gi|327552741|gb|AEA99459.1| AMP-binding domain protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 579
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 241/555 (43%), Gaps = 70/555 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T +++ + +A GLL G+ GD V I S N EW + +A A IG I+ LN +
Sbjct: 59 TYKEYWLQIERVACGLLANGVEPGDRVGIWSPNNIEWSIVQ-MATARIGAIMVCLNPAYR 117
Query: 93 FKEASRAITSIRPVMLV---------------------TDESSDSWYLELQHTAIPSLRW 131
E + AI +++ LV D+ +DS L + +PSL++
Sbjct: 118 PNELAFAINNVQVKYLVMAQSFKQSNYVAMLKELAPEIEDDRNDSLAQPLSLSMLPSLKF 177
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++G D + L + + ++ + + + I FTSGTTG+PKG +
Sbjct: 178 IYTIGDQPVDGLLPFSALQREPTESLRIKLTEIEAELSADDNINIQFTSGTTGNPKGATL 237
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESK 249
+H ++ L + + D PL H G+ + L GAC VF + F +
Sbjct: 238 THRNILNNGLLVAQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPGESFAPE 297
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L VE+ T+L VP + L K+ +++ + G P ELM++ +
Sbjct: 298 TTLRTVEEEKCTALHGVPTMFIAELELPNFKEF--DLSTLRTGVMAGSTCPEELMRKVHS 355
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
F +++ YG TE S + +T D E Q VG+
Sbjct: 356 EFNMTEVVIGYGQTE-CSPINHITDIDSPFEK-------------------QVKTVGRAM 395
Query: 370 PHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
PH E+K+ + + G I +G VM YW + E WL +GD+G +D
Sbjct: 396 PHTEVKIIDAKGNTLPIGEPGEICAKGYCVMKGYWGDEAKTKATIDDEGWLHSGDLGEMD 455
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V +VGR I GGEN+YP E+E VL QH + V GI + R E V ++
Sbjct: 456 DEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHNDVSDAAVFGIPDDRYGEQVCLWIKA 515
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+E+ E E +R++ + K L FK P+ ++ + +P+T TGK+
Sbjct: 516 KENRHIDE----------------EKIREYLKSK-LAYFKVPK-YINVVQDYPMTVTGKL 557
Query: 545 RRDEVRREVMSHLKS 559
++ ++R ++ LK
Sbjct: 558 QKFKMREHMIETLKK 572
>gi|15609642|ref|NP_217021.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
gi|15842033|ref|NP_337070.1| AMP-binding protein [Mycobacterium tuberculosis CDC1551]
gi|31793685|ref|NP_856178.1| AMP-binding protein [Mycobacterium bovis AF2122/97]
gi|148662341|ref|YP_001283864.1| AMP-binding protein [Mycobacterium tuberculosis H37Ra]
gi|148823702|ref|YP_001288456.1| AMP-binding domain protein [Mycobacterium tuberculosis F11]
gi|167967650|ref|ZP_02549927.1| acyl-CoA synthetase [Mycobacterium tuberculosis H37Ra]
gi|253798415|ref|YP_003031416.1| AMP-binding protein [Mycobacterium tuberculosis KZN 1435]
gi|254232634|ref|ZP_04925961.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|254366808|ref|ZP_04982850.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551552|ref|ZP_05141999.1| AMP-binding domain protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289444036|ref|ZP_06433780.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289570665|ref|ZP_06450892.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289575210|ref|ZP_06455437.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289751114|ref|ZP_06510492.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289754614|ref|ZP_06513992.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289758637|ref|ZP_06518015.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|289762673|ref|ZP_06522051.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|294994388|ref|ZP_06800079.1| AMP-binding domain protein [Mycobacterium tuberculosis 210]
gi|297635113|ref|ZP_06952893.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN 4207]
gi|297732104|ref|ZP_06961222.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN R506]
gi|298525977|ref|ZP_07013386.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|306776778|ref|ZP_07415115.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|306780544|ref|ZP_07418881.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|306785305|ref|ZP_07423627.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|306789659|ref|ZP_07427981.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|306793986|ref|ZP_07432288.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|306798381|ref|ZP_07436683.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|306804261|ref|ZP_07440929.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|306807698|ref|ZP_07444366.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|306968658|ref|ZP_07481319.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|306972889|ref|ZP_07485550.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|307080602|ref|ZP_07489772.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|307085188|ref|ZP_07494301.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|313659438|ref|ZP_07816318.1| AMP-binding domain protein [Mycobacterium tuberculosis KZN V2475]
gi|339632531|ref|YP_004724173.1| fatty-acid-CoA ligase [Mycobacterium africanum GM041182]
gi|340627519|ref|YP_004745971.1| putative fatty-acid-CoA ligase FADD35 [Mycobacterium canettii CIPT
140010059]
gi|375295678|ref|YP_005099945.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 4207]
gi|385991815|ref|YP_005910113.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5180]
gi|385995434|ref|YP_005913732.1| AMP-binding protein [Mycobacterium tuberculosis CCDC5079]
gi|385999285|ref|YP_005917584.1| AMP-binding protein [Mycobacterium tuberculosis CTRI-2]
gi|392387143|ref|YP_005308772.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|392431886|ref|YP_006472930.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis KZN 605]
gi|397674409|ref|YP_006515944.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|422813553|ref|ZP_16861925.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|424804843|ref|ZP_18230274.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|424948174|ref|ZP_18363870.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|433627640|ref|YP_007261269.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|13882311|gb|AAK46884.1| substrate--CoA ligase [Mycobacterium tuberculosis CDC1551]
gi|31619278|emb|CAD97394.1| PROBABLE FATTY-ACID-COA LIGASE FADD35 (FATTY-ACID-COA SYNTHETASE)
(FATTY-ACID-COA SYNTHASE) [Mycobacterium bovis
AF2122/97]
gi|124601693|gb|EAY60703.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis C]
gi|134152318|gb|EBA44363.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506493|gb|ABQ74302.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis H37Ra]
gi|148722229|gb|ABR06854.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis F11]
gi|253319918|gb|ACT24521.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 1435]
gi|289416955|gb|EFD14195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T46]
gi|289539641|gb|EFD44219.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis K85]
gi|289544419|gb|EFD48067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T17]
gi|289691701|gb|EFD59130.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis T92]
gi|289695201|gb|EFD62630.1| substrate-CoA ligase [Mycobacterium tuberculosis EAS054]
gi|289710179|gb|EFD74195.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis GM 1503]
gi|289714201|gb|EFD78213.1| fatty-acid-CoA ligase FadD35 [Mycobacterium tuberculosis T85]
gi|298495771|gb|EFI31065.1| acyl-CoA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|308214839|gb|EFO74238.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu001]
gi|308326610|gb|EFP15461.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu002]
gi|308330032|gb|EFP18883.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu003]
gi|308333876|gb|EFP22727.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu004]
gi|308337676|gb|EFP26527.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu005]
gi|308341357|gb|EFP30208.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu006]
gi|308345886|gb|EFP34737.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu007]
gi|308349149|gb|EFP38000.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu008]
gi|308353773|gb|EFP42624.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu009]
gi|308357716|gb|EFP46567.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu010]
gi|308361656|gb|EFP50507.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu011]
gi|308365268|gb|EFP54119.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis SUMu012]
gi|323718913|gb|EGB28067.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CDC1551A]
gi|326904119|gb|EGE51052.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis W-148]
gi|328458183|gb|AEB03606.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 4207]
gi|339295388|gb|AEJ47499.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5079]
gi|339299008|gb|AEJ51118.1| AMP-binding domain protein [Mycobacterium tuberculosis CCDC5180]
gi|339331887|emb|CCC27590.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium africanum
GM041182]
gi|340005709|emb|CCC44875.1| putative fatty-acid-CoA ligase FADD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140010059]
gi|344220332|gb|AEN00963.1| AMP-binding domain protein [Mycobacterium tuberculosis CTRI-2]
gi|358232689|dbj|GAA46181.1| acyl-CoA synthetase [Mycobacterium tuberculosis NCGM2209]
gi|378545694|emb|CCE37972.1| fadD35 [Mycobacterium tuberculosis UT205]
gi|379028808|dbj|BAL66541.1| acyl-CoA synthetase [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|392053295|gb|AFM48853.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis KZN 605]
gi|395139314|gb|AFN50473.1| fatty-acyl-CoA synthase [Mycobacterium tuberculosis H37Rv]
gi|432155246|emb|CCK52492.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140060008]
gi|440581981|emb|CCG12384.1| putative FATTY-ACID-CoA LIGASE FADD35 (FATTY-ACID-CoA SYNTHETASE)
(FATTY-ACID-CoA SYNTHASE) [Mycobacterium tuberculosis
7199-99]
gi|444896038|emb|CCP45299.1| Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium tuberculosis
H37Rv]
Length = 547
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 241/563 (42%), Gaps = 85/563 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R + + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 REALVDMVARRRFNYSELLTDVHRLATGLVRAGIGPGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--------- 127
A IG I+ +N + +E A+ M++ S D+ Y + P
Sbjct: 99 AEIGAILVTINPAYRVREVEYALRQSGVAMVIAVASFKDADYAAMLAEVGPRCPDLADVI 158
Query: 128 ---SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
S RW +L + D + TA L G V I +TSGTT
Sbjct: 159 LLESDRWD-ALAGAEPDLPALQQ--TAARLDG--------------SDPVNIQYTSGTTA 201
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF- 242
PKGV +SH ++ ++GY D P H G + +A GA V
Sbjct: 202 YPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIP 261
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
P F+ + L AV+ TSL VP + +A L T S++ + G P E
Sbjct: 262 APGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVE 319
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ + + YGMTETS P + +SV + G
Sbjct: 320 VMRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVG 360
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+KV + VG TRG VM YW+ V + W+
Sbjct: 361 T-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMH 419
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 420 TGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGE 479
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKP 535
++A V+LR N L+ E LR++C + + FK PR LW
Sbjct: 480 ELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDE 521
Query: 536 FPLTSTGKIRRDEVRREVMSHLK 558
FP+T TGK+R+ E+R++ + +L+
Sbjct: 522 FPMTVTGKVRKVEMRQQALEYLR 544
>gi|443693463|gb|ELT94820.1| hypothetical protein CAPTEDRAFT_20304 [Capitella teleta]
Length = 533
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 155/558 (27%), Positives = 242/558 (43%), Gaps = 66/558 (11%)
Query: 12 CLSRIAAVKRNSVV--TITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEW 69
CL+ K V +TG+ + + + + +A GL ++GLR GD++AI + NS
Sbjct: 21 CLNTFETHKGKVAVIDAVTGHEYRY-EDLLHHIRAVASGLAKLGLRKGDVLAIFSSNSPE 79
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSL 129
++ A G IV +N ++ E + + + + + E+ PSL
Sbjct: 80 WIFLFFAAICNGAIVTTINPSYTAYEVKHHVLDSKAKFIYSTNAHADIVFEVAKEC-PSL 138
Query: 130 RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGV 189
+ + LG + V+ +L D P H + ++ ++SGTTG PKGV
Sbjct: 139 KELIFLGGRTG-CVDFHHLLNDD------GSHFPSVHINPVDDVAVLPYSSGTTGLPKGV 191
Query: 190 VISHSALIVQ-------SLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHV 241
+I+H ++ Q + +V E V L P H G+ M A L+ G V
Sbjct: 192 MITHYNIVSQIMQFTHEAYVDQEMVATDEQSVVLGFLPFFHCYGMLGVMTATLLQGNRLV 251
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+P+FE LE ++++ V SL+ VP I+ LA V + SVKK G LP
Sbjct: 252 TLPRFEPTLFLETIQKYKVNSLLLVPPIVLFLAKHPMVSEY--DLSSVKKAGCGAAPLPE 309
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+M++ + AYGMTET+ T +P V P S
Sbjct: 310 EVMQQFVKRLKVPQSKQAYGMTETTLVST--------------MPPQTSPVRPGSS---- 351
Query: 362 GVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
G P P+VE++V G+ G + RG +VM Y +Q A S E WL
Sbjct: 352 ----GPPVPNVEIQVVDPETGAVLGTHQRGELWIRGPNVMKGYLNQPEATHSTKDDEGWL 407
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGDIG DD ++V R IK G V P E+EA+L +HP I V+G+ +A
Sbjct: 408 HTGDIGYYDDDSYFYIVDRMKELIKFKGFQVAPAELEALLQEHPKIADAAVIGVPDAEAG 467
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E+ A V L+ C+ S + + ++ ++ R FK R V +
Sbjct: 468 ELPKAYVVLK-------PKCEMSVDDVKNFVAGKMAR----------FKQLRGGVDFVAS 510
Query: 536 FPLTSTGKIRRDEVRREV 553
P + +GKI R E+R ++
Sbjct: 511 VPKSPSGKILRKELRAQL 528
>gi|167564616|ref|ZP_02357532.1| acyl-CoA synthetase [Burkholderia oklahomensis EO147]
gi|167571758|ref|ZP_02364632.1| acyl-CoA synthetase [Burkholderia oklahomensis C6786]
Length = 575
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 244/550 (44%), Gaps = 68/550 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T + F +V LA L+ +G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWRAFAHEVDVLAAALIGLGIERGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ + +L+ E S Y E L +PSLR V++
Sbjct: 119 LAELEYALNKVGCRLLIAAERFKTSAYTEMIVEIAPELATHASGELHAARVPSLRTVVTM 178
Query: 136 GS-SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+ + ++ DML R + + I FTSGTTGSPKG ++H
Sbjct: 179 SDVAPAGMLSFADMLARGRAALDPARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTHR 238
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSAL 252
++ + + +++ E D PL H G+ S +A + VGA VF FE + L
Sbjct: 239 NVVNNARSIASVMRLTEADAMCIPVPLYHCFGMVLSVLACMSVGAKMVFPGAAFEPGATL 298
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
AV T+L VP + +A L +++ + G P E MK +
Sbjct: 299 AAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVSKMH 356
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+++ AYGMTETS P +F + T +S+ + + VG+ PH+
Sbjct: 357 MSEVTIAYGMTETS-------------------PVSFQSSTTDSLEK-RTTTVGRIQPHL 396
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+ G
Sbjct: 397 EAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEEG 455
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 FCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRAG 515
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+E LR+ CR + +K PR +V + P+T TGK+++
Sbjct: 516 ETMTEDE----------------LREFCR-GQIAHYKVPR-YVRFVDELPMTVTGKVQKF 557
Query: 548 EVRREVMSHL 557
+R ++ L
Sbjct: 558 VMRERMIDEL 567
>gi|423403479|ref|ZP_17380652.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG2X1-2]
gi|423475873|ref|ZP_17452588.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG6X1-1]
gi|401648576|gb|EJS66171.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG2X1-2]
gi|402434705|gb|EJV66742.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG6X1-1]
Length = 496
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 245/543 (45%), Gaps = 73/543 (13%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ + IT T +Q + V N+A L+ ++ ++ G+ +AI + NS Y+ + A+A +
Sbjct: 17 DRIAIITEEEEMTYKQLHEYVSNVAAYLIYDLNVQKGERIAILSQNSLEYIVLLFAIAKV 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I PLN R + E + +L +E+ + L + +
Sbjct: 77 ECIAVPLNIRLTENELIFQLKDSETTVLFVEETFQNMALSMHKVS--------------- 121
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
+V + +++ LK R + IIC+TSGTTG PKG V++ + +
Sbjct: 122 -YVQR--VISIKSLKEIEDRKSDNFEEINESASFIICYTSGTTGKPKGAVLTQKNMFWNA 178
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHC 259
L + D + PL HIGG+ A L G + KFE +AL +E+H
Sbjct: 179 LNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIIPRKFEPTTALSMIEKHK 238
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI-S 318
VT ++ VP I L + + T SV+ NGG P ELM+E + + L
Sbjct: 239 VTVVMGVPTIHQALINCAKFETT--NLQSVRWFYNGGAPCPEELMREFID---RGFLFGQ 293
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
+GMTETS P F ++ H+ + GKP E +
Sbjct: 294 GFGMTETS-------------------PTVFMLSEEDARHKVGSI--GKPVLFCEYVLID 332
Query: 379 DGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ + VG +L RG +VM YW++ A + ++ G WL TGD+ +D+ G V+++
Sbjct: 333 ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLYTGDLAKVDEDGFVYII 390
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A + + S + +E
Sbjct: 391 GRKKDMIISGGENIYPLEVEQVINKISEVYEVAVVGRQHVKWGEIPIAFIVKKSSSELTE 450
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
KE++ +HCR L +K P+ V + P +TGKI++ ++ +
Sbjct: 451 ---------KEVI-------EHCR-LFLAKYKLPKEIVFLEE-LPKNATGKIQKAQLANQ 492
Query: 553 VMS 555
+ S
Sbjct: 493 LKS 495
>gi|377574176|ref|ZP_09803207.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
gi|377536979|dbj|GAB48372.1| long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC
104925]
Length = 508
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 144/551 (26%), Positives = 233/551 (42%), Gaps = 72/551 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + L+R S+ R T + + V ++A L+ +R GD VA++ N
Sbjct: 3 LTEMLTRSVESSATSIALSDDTRTVTYAELGERVGDVAAALVARRVRPGDRVALAVPNVV 62
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
+ +A+ GG+V PLN E R + PV+LV +W +P+
Sbjct: 63 EFAYLYHGIAWAGGVVVPLNPVLRVAELRRLLDDCDPVLLV------AW------AGVPA 110
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP------EGAVIICFTSGT 182
L ++ + +L + +H AP + ++ +TSGT
Sbjct: 111 LTEAGDAAAAGEAL-----GVEVVVLDAATFPEFAPSHPDAPLVPRRGDDLAVLLYTSGT 165
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TG PKG +++H L+V + +V G DDV L PL H G + + + ++ HV
Sbjct: 166 TGEPKGAMLTHDNLVVNAEVDRDLVDMGPDDVVLGALPLFHAFGQTCCLNLPLLAGSHVV 225
Query: 243 I-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ P F + L +V + +T + VPA+ L + +++ ++ G L
Sbjct: 226 LHPVFNPRHTLASVGEKGITVFLAVPAMYTALLHFLARSPEDYDLSTLRMTISSGAPLAV 285
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
EL+ F ++ YG++ETS + T G P +V
Sbjct: 286 ELLHRVEERF-GVLVLEGYGLSETSPTATL---------------NVEGRCRPGTV---- 325
Query: 362 GVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
G P P VE++V + VG + RG +VM YW+ A +V + + WL
Sbjct: 326 ----GTPLPGVEVRVVDQETGEPVEIGAVGEVAIRGHNVMRGYWNAPEATAAVLSPDGWL 381
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G++DD G + +V R+ + GGENVYP EVE V HP + V+G+ +
Sbjct: 382 RTGDLGTLDDDGFLTIVDRKKDLVIVGGENVYPREVEEVFYAHPAVAECAVLGVPDPVRG 441
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E+V A V L E E+ LR H R +L+G K PR V + +
Sbjct: 442 EVVGAAVVLAEGADADEAE----------------LRAHVR-AHLSGAKVPR-HVWFVEG 483
Query: 536 FPLTSTGKIRR 546
P T KI +
Sbjct: 484 LPKGGTNKILK 494
>gi|429756335|ref|ZP_19288932.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429171453|gb|EKY13073.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 542
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 241/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ N T +F + V +A+GL+ +G++ GD V I + N EW L A
Sbjct: 35 KEALISVHQNYRVTYTEFYKQVTTVAKGLIALGVKQGDRVGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + + S Y ++ + A +LR V
Sbjct: 92 AKIGAIMVNINPAYRTSELIYVINQSGISYIFAAPQFKSSNYKKMINDAREFTETLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G S F+ + +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGESWQHFLAHGEKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + Y E D P H G+ V + IP F++
Sbjct: 205 HNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLACTVHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T + P + Q VG H
Sbjct: 323 NMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSVGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 363 LEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGDLAMMDE 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVMAWIKPK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E + L+ E L C+ + + +K PR W+ + FP+T +GK
Sbjct: 483 EG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|319950960|ref|ZP_08024832.1| AMP-binding domain protein [Dietzia cinnamea P4]
gi|319435382|gb|EFV90630.1| AMP-binding domain protein [Dietzia cinnamea P4]
Length = 549
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 242/548 (44%), Gaps = 67/548 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R+++V + R T +F+ DV LA GL +G+R+GD V I + N W EW++ A
Sbjct: 44 DRDALVDVQAGRRWTYSEFLADVRRLASGLHRLGIRAGDRVGIWSPN-RW--EWVMVQYA 100
Query: 77 VAFIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWY---LELQHTAIPSLRW 131
A IG ++ +N YR E +I+ V + + DS Y L P L
Sbjct: 101 TAEIGAVLVNINPSYRVHELEFVLGQAAIKAV-IAAPQFKDSDYTGMLAQVQPNCPDLEL 159
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
V G + + AD+L +R+ H + I +TSGTTG PKG +
Sbjct: 160 VVLFGDEEWESMVSGPT-DADVLA--EIRAGLTNHD-----PINIQYTSGTTGFPKGATL 211
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESK 249
SHS ++ ++ Y E D P H G+ +A G+C V P F+
Sbjct: 212 SHSNILNNGYFVGELINYSEVDRVCIPVPFYHCFGMVMGNLACTTHGSCMVIPAPAFDPV 271
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
++L+AVEQ TSL VP + +A L +++ + G P M++ +
Sbjct: 272 ASLKAVEQEKCTSLYGVPTMF--IAELALEDFDSYDLSTLRTGIMAGSPCPEATMRQVID 329
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ YGMTETS T T D +L+ + VG+
Sbjct: 330 RMNMEEVSICYGMTETSPVST-QTRADDSLDR-------------------RVATVGRVG 369
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+K+ + G TRG VML YW+Q W+ TGDIG +
Sbjct: 370 PHLEIKIIDPSTGETLPRGEAGEFCTRGYSVMLGYWEQPDKTAEAIDEAGWMHTGDIGEM 429
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G V + GR + GGEN+YP EVE L HP I+ V+G+ + + E ++A VR
Sbjct: 430 DADGYVKITGRIKDMVIRGGENIYPREVEEFLYTHPDILDAQVIGVPDPKYGEELMAWVR 489
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+ ++ L + EV R+ K L K P+ +V FP+T TGK
Sbjct: 490 LK--------------PGRDDLTADEV-REFATGK-LARHKIPK-YVHVVDEFPMTVTGK 532
Query: 544 IRRDEVRR 551
+R+ ++R+
Sbjct: 533 VRKVDMRK 540
>gi|289746287|ref|ZP_06505665.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
gi|289686815|gb|EFD54303.1| substrate-CoA ligase [Mycobacterium tuberculosis 02_1987]
Length = 547
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 241/563 (42%), Gaps = 85/563 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R + + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 REALVDMVARRRFNYSELLTDVHRLATGLVRAGIGPGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--------- 127
A IG I+ +N + +E A+ M++ S D+ Y + P
Sbjct: 99 AEIGAILVTINPAYRVREVEYALRQSGVAMVIAVASFKDADYAAMLAEVGPRCPDLADVI 158
Query: 128 ---SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
S RW +L + D + TA L G V I +TSGTT
Sbjct: 159 LLESDRWD-ALAGAEPDLPALQQ--TAARLDG--------------SDPVNIQYTSGTTA 201
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF- 242
PKGV +SH ++ ++GY D P H G + +A GA V
Sbjct: 202 YPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIP 261
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
P F+ + L AV+ TSL VP + +A L T S++ + G P E
Sbjct: 262 APGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVE 319
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ + + YGMTETS P + +SV + G
Sbjct: 320 VMRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVG 360
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+KV + VG TRG VM YW+ V + W+
Sbjct: 361 T-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMH 419
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 420 TGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGE 479
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKP 535
++A V+LR N L+ E LR++C + + FK PR LW
Sbjct: 480 ELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDE 521
Query: 536 FPLTSTGKIRRDEVRREVMSHLK 558
FP+T TGK+R+ E+R++ + +L+
Sbjct: 522 FPMTVTGKVRKVEMRQQALEYLR 544
>gi|423559326|ref|ZP_17535628.1| hypothetical protein II3_04530 [Bacillus cereus MC67]
gi|401188793|gb|EJQ95854.1| hypothetical protein II3_04530 [Bacillus cereus MC67]
Length = 518
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 252/541 (46%), Gaps = 72/541 (13%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ GD +A+S N + A A +G I+ P N +
Sbjct: 32 RRITYKQLKNEVDCLATAFKRLGVSKGDRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 91
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWY-----LELQHTAIPSLRWHVSLGSSSSDFV-- 143
+ E + S P +L+ + + L + AI ++R+ SS + +
Sbjct: 92 YKSYEIEFILKSSAPKLLIASGEFEKNFGFEKVLTMVQKAI-TVRFPQENLSSYEELMRT 150
Query: 144 NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 203
+D+ +I + L I +TSGTTG+PKGV+++H A +VQS
Sbjct: 151 ETKDIEQVNINVNHDL--------------FCILYTSGTTGTPKGVMVTHRA-VVQSAQT 195
Query: 204 IAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVT 261
I I + +DDV++ +APL HI G++ + + + +G + KF + L+ +EQ VT
Sbjct: 196 IGIELHCTQDDVFIISAPLFHIFGMAINMLCAVAMGGRMILQEKFRPRETLQLIEQEKVT 255
Query: 262 SLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYG 321
VP + L K S++ L G +P++ + E L ++G
Sbjct: 256 IQKGVPTMFIKELELEDFDKY--DLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFG 312
Query: 322 MTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS 381
+TET S MT Y T + N+T +GK P V LK+ +
Sbjct: 313 ITETVS--ITMTSYGDTKQ----------NITET---------LGKAIPGVTLKIVDENR 351
Query: 382 -----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
VG I +G VM Y++ V E W +GD+G++D G + VGR+
Sbjct: 352 VALLPGEVGEIAVKGFGVMKGYYNMPEQTKQVLDNEDWYYSGDLGTLDHQGYLRFVGRKK 411
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
I GG NVYP+E+EAV+++HP +I VVG+ + L E+ A +RL
Sbjct: 412 EMIIRGGLNVYPQEIEAVIMKHPKVIEAAVVGLPDKVLGEIACAVIRL------------ 459
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
KN E + S E ++ + +EK + +K P V++ FP+T++GKI++ ++R +V S+
Sbjct: 460 ---KNGE-VSSEEEMKLYLKEK-MAIYKLPEK-VIFTDEFPVTASGKIQKLKLREQVSSN 513
Query: 557 L 557
+
Sbjct: 514 I 514
>gi|403528225|ref|YP_006663112.1| acyl-CoA synthetase [Arthrobacter sp. Rue61a]
gi|403230652|gb|AFR30074.1| putative acyl-CoA synthetase [Arthrobacter sp. Rue61a]
Length = 558
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 161/550 (29%), Positives = 250/550 (45%), Gaps = 73/550 (13%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
Q+ DV LAR LL +G+ G+ + I + N +EW + A A IG ++ +N +
Sbjct: 52 QKLNDDVDRLARALLAMGVAKGERIGIWSPNCAEWTI-LQYATAKIGAVLVNVNPAYRTH 110
Query: 95 EASRAITSIRPVMLV---TDESSDSWYLELQHTA---IPSLRWHV----------SLGSS 138
E + MLV +D++SD Y+ + A P LR V +LG
Sbjct: 111 ELEFVVKQNGMRMLVAAPSDKNSD--YVGMARDAASNCPELREIVFLPGAPELGLTLGVP 168
Query: 139 SSDF-VNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+D + ++LT AD + +LR P + + +TSGTTG PKG ++H +
Sbjct: 169 EADHELTYAELLTRADGVGTSALRDR--MGELDPYDPINLQYTSGTTGFPKGATLTHHNI 226
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK--FESKSALE 253
+ + ++ Y E D + P H G+ + L GA + IP F + +ALE
Sbjct: 227 LNNGHSIGRLLNYTEHDRVVIPVPFYHCFGMVIGNLNALSFGAATI-IPGRGFNASAALE 285
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AV+ TSL VP + +A L +++ + G P E+M+ +
Sbjct: 286 AVQDFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMRRVIDEMHM 343
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+ YGMTETS T MT TLE + VG+ PH+E
Sbjct: 344 VDVAICYGMTETSPVST-MTRAGDTLEQ-------------------RTSTVGRTMPHLE 383
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+V GS V G + TRG VM YW Q E W+ TGD+ +D+ G
Sbjct: 384 SRVIDPGSMEVVERGVIGELCTRGYSVMQGYWGQPDKTAEAIDAEGWMHTGDLARMDEDG 443
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ + GR + GGEN+YP E+E L HP I + V+G+ + + E ++AC+ L
Sbjct: 444 YLVIEGRIKDMVIRGGENIYPREIEEFLYLHPSIQDVQVIGVPDEKYGEELMACIIL--- 500
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
K L++E L ++CR K L +K PR +V R+ FP+T +GK+R+
Sbjct: 501 ------------KPGSPALTAEELAEYCRGK-LAHYKIPR-YVDVRESFPMTVSGKVRKV 546
Query: 548 EVRREVMSHL 557
++R+E +S L
Sbjct: 547 DMRQEAVSRL 556
>gi|121638387|ref|YP_978611.1| AMP-binding protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990881|ref|YP_002645568.1| AMP-binding protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378772241|ref|YP_005171974.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449064578|ref|YP_007431661.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|121494035|emb|CAL72513.1| Probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224773994|dbj|BAH26800.1| acyl-CoA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|341602425|emb|CCC65101.1| probable fatty-acid-CoA ligase fadD35 [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356594562|gb|AET19791.1| Fatty-acid-CoA ligase [Mycobacterium bovis BCG str. Mexico]
gi|449033086|gb|AGE68513.1| AMP-binding domain protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 547
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 241/563 (42%), Gaps = 85/563 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R + + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 REALVDMVARRRFNYSELLTDVHRLATGLVRAGIGPGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--------- 127
A IG I+ +N + +E A+ M++ S D+ Y + P
Sbjct: 99 AEIGAILVTINPAYRVREVEYALRQSGVAMVIAVASFKDADYAAMLAEVGPRCPDLADVI 158
Query: 128 ---SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
S RW +L + D + TA L G V I +TSGTT
Sbjct: 159 LLESDRWD-ALAGAEPDLPALQQ--TAARLDG--------------SDPVNIQYTSGTTA 201
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF- 242
PKGV +SH ++ ++GY D P H G + +A GA V
Sbjct: 202 YPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIP 261
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
P F+ + L AV+ TSL VP + +A L T S++ + G P E
Sbjct: 262 APGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVE 319
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ + + YGMTETS P + +SV + G
Sbjct: 320 VMRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVG 360
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+KV + VG TRG VM YW+ V + W+
Sbjct: 361 T-VGRVGPHLEIKVVDPATGEAVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMH 419
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 420 TGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGE 479
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKP 535
++A V+LR N L+ E LR++C + + FK PR LW
Sbjct: 480 ELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDE 521
Query: 536 FPLTSTGKIRRDEVRREVMSHLK 558
FP+T TGK+R+ E+R++ + +L+
Sbjct: 522 FPMTVTGKVRKVEMRQQALEYLR 544
>gi|357021292|ref|ZP_09083523.1| fatty-acid--CoA ligase [Mycobacterium thermoresistibile ATCC 19527]
gi|356479040|gb|EHI12177.1| fatty-acid--CoA ligase [Mycobacterium thermoresistibile ATCC 19527]
Length = 499
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 161/571 (28%), Positives = 247/571 (43%), Gaps = 93/571 (16%)
Query: 5 SQAH--ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
S++H I ++R A + + G+R + ++F L LL GLR GD VA+
Sbjct: 2 SRSHLLIGDLITRAARTYGAAPALVHGDRVMSFREFDDATNRLGNALLARGLRPGDHVAV 61
Query: 63 SALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ 122
A N + A+A G + PLN R + E + I + LVTD + +
Sbjct: 62 LAPNGIDGVVTYYALAKAGLVRVPLNSRETDFELAYKIDDSQARALVTDGRIPAETELVI 121
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
HT L ++ G+ +RD PE + + +T GT
Sbjct: 122 HTE--ELAGMIA-GADPGPCRIERD----------------------PEDPLRLAYTGGT 156
Query: 183 TGSPKGVVISHSALIVQSLAKIA------IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV 236
TG PK VV++ + LA+IA + D V LH AP+ H G + + L+
Sbjct: 157 TGKPKAVVLTTRS----ELAEIANFLVDLLPDLTPDSVMLHAAPITHGSG-AFFLPHLVK 211
Query: 237 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
GA +V +P+F + ++A +H T+ VP + +A ++ + + R ++++ GG
Sbjct: 212 GARNVILPRFTPQGFVDAAVEHGATATFMVPTM---IAMMLEDAEIDRDRLKLRRLCYGG 268
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
+ L+ + + YG E ++T + P TP +L A
Sbjct: 269 APIAPTLLARGLETLGPV-FVQLYGQAEAPLAITCLQ---PWEHTPERLTSA-------- 316
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG 411
GKP VE+ + + + V G ++TRG H M YW + A
Sbjct: 317 ---------GKPYTFVEMDIRDEEDNSVPPGTPGEVVTRGPHTMSGYWRRPEATAETLGE 367
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
+ WL TGDIG +D+ G ++L+ RRN I SGG NVYP EVE LL HP + VVVG+ +
Sbjct: 368 DGWLRTGDIGQVDEEGYLYLLDRRNDVIISGGFNVYPREVEDALLTHPAVREAVVVGVDD 427
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
R + V A V LRE + ++ L HC E+ L GFK PR +
Sbjct: 428 ERWGQRVSAAVVLREE------------------VDTQALIDHCAER-LAGFKRPRHIEV 468
Query: 532 WRKPFPLTSTGKIRRDEVR------REVMSH 556
W + P + GK R VR EV +H
Sbjct: 469 WDE-LPKSPVGKSLRRTVRETMRANEEVTAH 498
>gi|359148032|ref|ZP_09181274.1| AMP-binding domain protein [Streptomyces sp. S4]
Length = 541
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 169/560 (30%), Positives = 239/560 (42%), Gaps = 75/560 (13%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L+R A R ++V + R T +F +DV LAR LL G+ GD V I A N
Sbjct: 30 LARTVAAHPDREALVDVASGRRWTYARFAEDVERLARALLARGVLKGDRVGIWATNCP-- 87
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYLELQ-H 123
EW+L A A IG I+ +N + E + + +LV ++D L +
Sbjct: 88 -EWVLVQYATARIGAIMVNINPAYRAHELAYVLRQSGTGLLVATPGHRTNDFRALVNEVR 146
Query: 124 TAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
P+LR LG S + + D D L + + + I +TSGT
Sbjct: 147 EECPALRETAYLGEESWTALLAAADACPPDALAAREA-------ELSCDDPINIQYTSGT 199
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TG PKG +SH ++ VGY E D P H G+ +A GAC V
Sbjct: 200 TGFPKGATLSHHNILNNGYFVGENVGYTEQDRICLPVPFYHCFGMVMGNIAATTHGACIV 259
Query: 242 FI-PKFESKSALEAVEQHCVTSLITVPAIMA---DLATLIRVKKTWKGRDSVKKILNGGG 297
P F+ + L AV Q TSL VP + +LA T S++ + G
Sbjct: 260 IPGPVFDPVTTLTAVAQERCTSLYGVPTMFIGELNLADFASYDLT-----SLRTGIMAGS 314
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+MK A++ YGMTETS P + +S+
Sbjct: 315 PCPEEVMKRVVAEMHMAEVSICYGMTETS-------------------PVSTQTRRDDSL 355
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
G VG+ PH+E+KV G+ G + TRG VML YW++
Sbjct: 356 AHRTGT-VGRVLPHLEVKVVDPGTGITVERGEAGELCTRGYSVMLGYWEEPERTAEAVDP 414
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W+ TGD+ + G V +VGR I GGEN+YP E+E L HP I + VVG+ +
Sbjct: 415 AGWMHTGDLAVLRRDGYVEIVGRIKDMIIRGGENIYPREIEEFLYTHPKIADVQVVGVPD 474
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFV 530
+ E V+ACV K L+ E LR CR++ L +K P RL +
Sbjct: 475 GKYGEEVLACV---------------IPKQNAGPLTLEELRAFCRDR-LAHYKVPSRLQL 518
Query: 531 LWRKPFPLTSTGKIRRDEVR 550
L FP+T +GK+R+ E+R
Sbjct: 519 L--DAFPMTVSGKVRKIELR 536
>gi|24373535|ref|NP_717578.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
gi|24347847|gb|AAN55022.1| AMP-dependent synthetase and ligase family protein [Shewanella
oneidensis MR-1]
Length = 578
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 241/548 (43%), Gaps = 68/548 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFK 94
+Q++ + LA GLL++G+ GD + I S N EW L A A IG I+ +N + +
Sbjct: 67 RQYLARIDALAAGLLKLGIGPGDRIGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYRPE 125
Query: 95 EASRAITSI--RPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E A+T++ R V + D+ S YL+ LQ A+P L++ + +G
Sbjct: 126 ELQYALTNVGCRAV-ICADKFKSSNYLQMLYTLAPELKECAAGQLQAKALPELQFVIRMG 184
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ S + D L ++ + +P A+ I FTSGTTGSPKG +SH +
Sbjct: 185 AEKSPGMLNFDDLLVEVSADDKAMLERIANGLSPYDAINIQFTSGTTGSPKGATLSHHNI 244
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSALEA 254
+ + + DD PL H G+ + L GA VF F+ + LE
Sbjct: 245 LNNGYLVAEAMKFTCDDKLCIPVPLYHCFGMVLGNLVCLAKGAAAVFPGDSFDPLTTLEV 304
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
VE+ T+L VP + +A L + T S++ + G P E+M+
Sbjct: 305 VERERCTALHGVPTMF--IAELEHPEFTRFDLSSLRTGVMAGATCPEEVMRRVQQLMYMQ 362
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+++ YG TE S L +T D +E + + VG+ PH E+
Sbjct: 363 EVLIGYGQTE-CSPLNHITEIDSPVEK-------------------RVLTVGRALPHTEV 402
Query: 375 KVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
K+ + + G + +RG +M YW+ + E WL +GDIG +D+ G V
Sbjct: 403 KIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDREGWLHSGDIGQMDEQGYV 462
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E L H + V G+ + + E V A +++R
Sbjct: 463 QIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVHSDKYGEEVCAWIKVRSGAT 522
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
E E +R EK FK PR ++ + +P+T TGKI++ ++
Sbjct: 523 IKE----------------EDIRHFLTEK-FAYFKVPR-YIKFVDQYPMTVTGKIQKFKM 564
Query: 550 RREVMSHL 557
R + L
Sbjct: 565 RELMYQEL 572
>gi|433642703|ref|YP_007288462.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
gi|432159251|emb|CCK56555.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070008]
Length = 547
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 241/563 (42%), Gaps = 85/563 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R + + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 REALVDMVARRRFNYSELLTDVHRLATGLVRAGIGPGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--------- 127
A IG I+ +N + +E A+ M++ S D+ Y + P
Sbjct: 99 AEIGAILVTINPAYRVREVEYALRQSGVAMVIAVASFKDADYAAMLAEVGPRCPDLADVI 158
Query: 128 ---SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
S RW +L + D + TA L G V I +TSGTT
Sbjct: 159 LLESDRWD-ALAGAEPDLPALQQ--TAARLDG--------------SDPVNIQYTSGTTA 201
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF- 242
PKGV +SH ++ ++GY D P H G + +A GA V
Sbjct: 202 YPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIP 261
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
P F+ + L AV+ TSL VP + +A L T S++ + G P E
Sbjct: 262 APGFDPAATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVE 319
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ + + YGMTETS P + +SV + G
Sbjct: 320 VMRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVG 360
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+KV + VG TRG VM YW+ V + W+
Sbjct: 361 T-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMH 419
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 420 TGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGE 479
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKP 535
++A V+LR N L+ E LR++C + + FK PR LW
Sbjct: 480 ELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDE 521
Query: 536 FPLTSTGKIRRDEVRREVMSHLK 558
FP+T TGK+R+ E+R++ + +L+
Sbjct: 522 FPMTVTGKVRKVEMRQQALEYLR 544
>gi|294140897|ref|YP_003556875.1| long-chain-fatty-acid--CoA ligase [Shewanella violacea DSS12]
gi|293327366|dbj|BAJ02097.1| long-chain-fatty-acid--CoA ligase, putative [Shewanella violacea
DSS12]
Length = 588
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 159/555 (28%), Positives = 247/555 (44%), Gaps = 80/555 (14%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++ Q + LA GLLE+G++ GD V I S N EW L A A IG I+ +N + +E
Sbjct: 74 EYQQHIDELAIGLLELGIKPGDRVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYRPEE 132
Query: 96 ASRAITSIR-PVMLVTDESSDSWYLELQH----------------TAIPSLRWHVSLGSS 138
A+T++ ++ ++ S YLE+ + A+P L+ + +G
Sbjct: 133 LKYALTNVACSAIICAEKFKSSHYLEMLYQLAPELLTCEPGKLASAALPELKSVIRMGDD 192
Query: 139 -SSDFVN----KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
S+ N KR ++ D L SL T S P A+ I +TSGTTGSPKG ++H
Sbjct: 193 LSAGMFNFNHIKRPLIDND---RAILDSLAATLS--PSDAINIQYTSGTTGSPKGATLTH 247
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSA 251
++ L + DD PL H G+ + + GA VF + FE ++
Sbjct: 248 HNILNNGLLVAEAMKLTSDDKLCIPVPLYHCFGMVLGNLVCIAKGAAAVFPGESFEPQAT 307
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AVE T L VP + + L K+ S++ + G P E+M+ +
Sbjct: 308 LTAVETERCTGLHGVPTMFIAMLELDGFKQF--DLSSLRTGIMAGATCPEEVMRRVQDLM 365
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ YG TETS + +T D L VT VG+ H
Sbjct: 366 YMQEVLIGYGQTETSP-INHITEIDAAL---------IKRVT----------TVGRAMAH 405
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
++K+ + V G + ++G VML YW+ + + WL +GDIG +DD
Sbjct: 406 TQVKIIDESGDTVAINQSGEVCSKGYCVMLGYWNDVEKTQATIDSQGWLHSGDIGEMDDE 465
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V +VGR I GGEN+YP E+E L H ++ V G+ + + E V A ++LR
Sbjct: 466 GYVKIVGRIKDMIIRGGENIYPREIEEKLYSHADVLDAAVFGVQSDKYGEEVCAWIKLR- 524
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR- 545
C L + E+ +H + FK PR ++ + +P+T TGKI+
Sbjct: 525 ------PGC--------LEIKDEI--RHFLTDKIAYFKVPR-YIKFVTEYPMTVTGKIQK 567
Query: 546 ---RDEVRREVMSHL 557
RD + +EV L
Sbjct: 568 YKMRDLMYKEVCEDL 582
>gi|384440097|ref|YP_005654821.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
gi|359291230|gb|AEV16747.1| Long-chain fatty acid--CoA ligase [Thermus sp. CCB_US3_UF1]
Length = 548
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 242/550 (44%), Gaps = 76/550 (13%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R + Q+ + V ARGL E GL G+ VAI NS ++ GG+ N
Sbjct: 44 RSISYQRLWRQVEAFARGLQEAGLEPGERVAIMLPNSPQFVIAFFGTLLAGGVAVNTNPM 103
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-KRDML 149
++ +E + LV + Y E++ A V + + D++ +++L
Sbjct: 104 YTPRELRHQLLDSGAKALVILDLLLPRYQEVKAEA----PVEVLVRTGIQDYLPFPKNLL 159
Query: 150 TADILK-----GYSLRSLP---FTHSWAPEGAVIIC-------FTSGTTGSPKGVVISHS 194
LK L +P F +W PE + +T GTTG KG +++H
Sbjct: 160 YPLTLKRKGQWPKELEGIPWRAFLKAWKPEPVALDLDDLALLQYTGGTTGVAKGAMLTHR 219
Query: 195 ALIVQSLAKIA-IVGYGE-DDVYLHTAPLCHIGGLSSAMAMLMVGACH-VFIPKFESKSA 251
L +L A I + E ++V L P H+ G++ AM + ++GA V +P+ E K
Sbjct: 220 NLSTNALQVRAWIPDFREGEEVVLGAIPFFHVYGMTVAMNLALLGAAKLVLLPRPEIKPI 279
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
+EA+E+H VT VP + ++ + S++ ++G LP E+ E
Sbjct: 280 VEAIEKHGVTLFPGVPTLYVAFNNFPGIEG--RSLKSIRACISGSAPLPLEVA-ERFEKL 336
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
AKL+ YG+TE S LY P + G+V G P P
Sbjct: 337 TGAKLVEGYGLTEASPVTHCNPLYGP---------RKLGSV-------------GLPFPG 374
Query: 372 VELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSI 423
VE KV + VG ++ +G +VM YW+ +P S + WL TGD+ +
Sbjct: 375 VEAKVVDEEGKELPPGEVGELILKGPNVMKGYWN----RPEESQKTLKDGWLFTGDLAKM 430
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G ++V R+ I +GG N+YP EVE VL QHP + VVG+ + E V A +
Sbjct: 431 DPDGYFYIVDRKKDMIIAGGYNIYPREVEEVLYQHPAVQEAAVVGVPDPYRGETVAAFIV 490
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L++ ++ S D + CR+ NL +K PR+ + +R P +S GK
Sbjct: 491 LKDEYKGKVSEKD--------------IETFCRQ-NLAAYKVPRI-LQFRDTLPKSSVGK 534
Query: 544 IRRDEVRREV 553
I + E+ +EV
Sbjct: 535 ILKRELAKEV 544
>gi|410697627|gb|AFV76695.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
oshimai JL-2]
Length = 560
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 152/540 (28%), Positives = 240/540 (44%), Gaps = 71/540 (13%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRA 99
++ A GL +G++ GD VAI NS ++ G + +N ++ +E
Sbjct: 59 EEARRFAGGLKALGVKPGDRVAIMLPNSPQFVIAFYGALMAGAVGVNVNPLYTPRELRHQ 118
Query: 100 ITSIRPVMLVTDESSDSWYLEL------QHTAIPSLRWHVSLGSSS-SDFVNKRDMLTAD 152
+ LV + +LE+ QHT + +R ++ + KRD L
Sbjct: 119 LKDAGAEYLVILDHLLPRFLEVEGETPVQHTVVTGIRDYLPFPKNLLYPLKAKRDGLPLG 178
Query: 153 ILK--GYS-----LRSLPFT-HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 204
+ G+ L++ P T H PE ++ +T GTTG KG +++H L+ L
Sbjct: 179 FPRRQGFHAFTELLKAGPATPHPADPEDLALLQYTGGTTGVSKGAMLTHKNLVANVLQID 238
Query: 205 AIVGYGED----DVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHC 259
A +D V L P H+ G++ AM L G V +P+ E +EA+E+H
Sbjct: 239 AWDPTSKDLHGQGVMLGALPFFHVYGMTVAMNYGLYAGFKIVLLPRPEIGPIVEAIEKHK 298
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLI 317
VT VP + ++ GR+ S++ L+G LP E+ K A+LI
Sbjct: 299 VTHFPGVPTLYVAFNNFPGIE----GRNVKSIRICLSGAAPLPVEVAKR-FEEITGARLI 353
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
YG++E S +T +P L G + S+ G P P VE KV
Sbjct: 354 EGYGLSEASP----VTHSNPVL----------GEIKKGSI--------GMPLPSVEAKVV 391
Query: 378 SDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ V G ++ +G +VM YW++ + S + + WL TGD+ +D+ G ++V
Sbjct: 392 DEEGKEVPFGEVGELIVKGPNVMKGYWNR-PDETSRALKDGWLFTGDLARMDEEGYFYIV 450
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R+ I +GG N+YP EVE VL QHP + VVG+ + E V A + L+ +Q
Sbjct: 451 DRKKDMIIAGGYNIYPREVEEVLYQHPAVQEAAVVGVPDPYRGETVAAFLVLKPEYQGKV 510
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
+ D L CRE NL +K PR+ + +R+ P +S GKI R E+R E
Sbjct: 511 TEKD--------------LEAFCRE-NLAAYKVPRI-IRFRESLPKSSVGKILRRELRDE 554
>gi|229196171|ref|ZP_04322921.1| Feruloyl-CoA synthetase [Bacillus cereus m1293]
gi|423576312|ref|ZP_17552431.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MSX-D12]
gi|228587329|gb|EEK45397.1| Feruloyl-CoA synthetase [Bacillus cereus m1293]
gi|401207308|gb|EJR14087.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MSX-D12]
Length = 496
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 242/543 (44%), Gaps = 73/543 (13%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ + IT T +Q + V +A L+ ++ ++ G+ +AI + NS Y+ + A+A +
Sbjct: 17 DRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNSLEYIVLLFAIAKV 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I PLN R + E + +L +E+ + L + S V L S
Sbjct: 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMHKV---SYVQRVILIKSLK 133
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
+ +++ +I + S IIC+TSGTTG PKG V++ + +
Sbjct: 134 EIEDRKSDNLEEINESASF---------------IICYTSGTTGKPKGAVLTQDNMFWNA 178
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHC 259
L + D + PL HIGG+ A L G + KFE +AL +E+H
Sbjct: 179 LNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIIPRKFEPTTALSMIEKHK 238
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI-S 318
VT ++ VP I L + + T SV+ NGG P ELM+E + + L
Sbjct: 239 VTVVMGVPTIHQALMNCEKFETT--NLQSVRWFYNGGAPCPEELMREFID---RGFLFGQ 293
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
+GMTETS ++ ++ D + +GKP E ++
Sbjct: 294 GFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPVLFCEYELID 332
Query: 379 DGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ + VG +L RG +VM YW++ A K ++ G WL TGD+ +D+ G V++V
Sbjct: 333 ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATKEAIQDG--WLYTGDLARVDEDGFVYIV 390
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR+ I SGGEN+YP EVE V+ + + + VVG R+ +W E
Sbjct: 391 GRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG----------------RQHVKWGE 434
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
+ K +L+ + + +HCR L +K P+ V + P +TGKI++ ++ +
Sbjct: 435 TPIAFIVKKSSSVLTEKEVIEHCR-LFLAKYKIPKEIVFLEE-LPKNATGKIQKAQLANQ 492
Query: 553 VMS 555
+ S
Sbjct: 493 LKS 495
>gi|170735362|ref|YP_001774476.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
MC0-3]
gi|169821400|gb|ACA95981.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
MC0-3]
Length = 509
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 144/551 (26%), Positives = 247/551 (44%), Gaps = 58/551 (10%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
+ + R A + + + R T Q + L+ L E GLR D VAI A+N Y
Sbjct: 6 EMIERNARLHGDHTALVYAERRLTHAQLAERARRLSGALYERGLRRQDRVAILAMNCAEY 65
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLR 130
E A + G I+A +N+R + E + P LV E+ + ++ +P +
Sbjct: 66 YETYRACEWAGFILATVNFRLAPAEILHILQDAAPKALVF-EAQYATVVDGLRAQLPGIE 124
Query: 131 WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
++ +G + + V+ ++ A ++G +RS P +++ + +TSGTTG PKGVV
Sbjct: 125 QYICIGDTPAWAVSFEAIMEAGSVEGPPIRSNPEDYAY-------LMYTSGTTGRPKGVV 177
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKS 250
+ A+ V + + + + + L T P H+GG+ ++ +G V FE K
Sbjct: 178 RTQQAMCVTAESCALVSEFSGNTRVLQTTPAFHVGGIGFVNSVAWMGGTTVVHRGFEPKQ 237
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
LE + Q +T V A++ A L + + S++ I+ +P L+ ++
Sbjct: 238 MLETIAQERITFTFMVAAMLQ--AVLDVPELSTYDVSSIENIVTAAAPVPPPLLARGIDA 295
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ YGMTE+++ P + G +P V + VG+P P
Sbjct: 296 LGPVFSVQ-YGMTESNACWL-----------PAHEVKPHG--SPEEVRRL--ASVGRPCP 339
Query: 371 HVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIG 421
++L++ D + G + R + YW+ SV+T E W +GD+G
Sbjct: 340 GIDLRIVDDHGNDLPQGQTGEVWLRSKTQLSGYWNN-----SVATVEALRDGWYRSGDMG 394
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
D G ++LV R+ I SGGEN+Y EVE VL+QHP ++ + V+G+ +A+ E V A
Sbjct: 395 YQDKDGYIFLVDRKKDMIISGGENIYSREVEDVLVQHPAVVDVAVIGVPHAQWGECVKAI 454
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V LR Q SE+ L + CR + +K P+ + + P T
Sbjct: 455 VVLRRGEQASEAQ----------------LIEFCRAL-IASYKCPK-SIAFVDELPRLPT 496
Query: 542 GKIRRDEVRRE 552
GKI + +R++
Sbjct: 497 GKISKVMLRKQ 507
>gi|404320688|ref|ZP_10968621.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi CTS-325]
Length = 562
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 257/569 (45%), Gaps = 76/569 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R +V+ N T + Q LA G L IGLR G+ + I + N+ LEWIL A
Sbjct: 33 ERPAVIVRHQNIRLTYSELRQLTDQLAEGFLAIGLRPGERLGIWSPNN---LEWILTQFA 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP-------- 127
A G I+ +N + E + + L+ S S Y+++ + +P
Sbjct: 90 SAKAGLILVNINPAYRAHELEYVLGKVECAALILAPSLKTSNYIDILRSIVPELDAARPG 149
Query: 128 --------SLRWHVSLGSSSSDFVNKRDMLT--ADILKGYSLRSLPFTHSWAPEGAVIIC 177
+LR + LG+ + + D +T D + G L L + + + I
Sbjct: 150 HVMSERLPNLRCVIRLGAEQTPGMLNFDEVTQSGDEVTGQELAQL--SEELQFDDPINIQ 207
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMV 236
FTSGTTGSPKG +SH ++ + E D P H G+ +A +
Sbjct: 208 FTSGTTGSPKGATLSHHNILNNGFFVGEAMQLSEQDRLCIPVPFYHCFGMVLGNLACVTH 267
Query: 237 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
G+C V IP F+ L+ VE+ T L VP + +A L + + S++ +
Sbjct: 268 GSCMV-IPNDSFDPLLTLQTVEEEQCTGLHGVPTMF--IAMLDHPEFSRFNLTSLRTGIM 324
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G P E+M+ + ++++ AYGMTETS P +F + T
Sbjct: 325 AGSPCPIEVMRRVVSEMHQSEITIAYGMTETS-------------------PVSFQSSTT 365
Query: 355 NSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVS 409
+ + + + VG+ PH+E+K+ +DG G +LTRG VM YW+ +
Sbjct: 366 DPLER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAI 424
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I + + GI
Sbjct: 425 DDAGWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFTHPAISDVQIFGI 484
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E++ A V+L +K+ LS E L ++CR++ + +K P
Sbjct: 485 PDRKFGEIICAWVKL----------------HKDGELSEEELIEYCRQR-IAHYKVP-AH 526
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
+ + FP+T TGKI++ +R+ ++ L+
Sbjct: 527 IRFVDQFPMTVTGKIQKFVMRQVMIEELE 555
>gi|410462439|ref|ZP_11316019.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409984446|gb|EKO40755.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 551
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 248/556 (44%), Gaps = 66/556 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+++VV + + T QQF + LA+GL+ +G++ G+ VA+ A N +++ + A A +
Sbjct: 26 QDAVVYVDRDYRLTWQQFDELTDELAKGLMALGIQKGEKVAVWATNVPFWVALMFATAKM 85
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E +T S + + + DS Y+E+ + P LR S
Sbjct: 86 GAVLLTVNTAYKRNELKYLLTNSDADNIFIINGFRDSDYIEILYDLAPELRNMQRGAIRS 145
Query: 140 SDFVNKRDMLTADILKGYSLRSLP---------FTHSWAPEGAVIIC-------FTSGTT 183
F N + + + K + S+P A C +TSGTT
Sbjct: 146 ETFPNLKRVCFLGVEKHRGMYSIPEIIGLARTVTDEELKARQATFNCHDVVNMQYTSGTT 205
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF 242
G PKGV++SH ++ + + D L PL H G + MA L G VF
Sbjct: 206 GFPKGVMLSHHNILNNGYSIGQRQRFTNKDKLLIHVPLFHCFGCVLGVMACLNHGTTMVF 265
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
F+ ++ ++EQ T++ VP + +A L + K + S++ + G P
Sbjct: 266 TEVFDPIKSMMSIEQEKCTAVYGVPTMFIAMLEHPLFAKFDFS---SLRTGIMAGSVCPV 322
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
+ M++ T ++ S YG+TE+S +T + DP + +
Sbjct: 323 QTMRQVTEKMYMKQITSVYGLTESSPGMTQSDVDDP--------------------YHYR 362
Query: 362 GVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VGK PHVE+KV ++ G + RG + M Y+ A WL
Sbjct: 363 VESVGKAFPHVEVKVLDPETNEEVERGKQGEVCCRGYNAMKGYYKNPEATAKCIDANGWL 422
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD+G +D+ G V + GR I GGEN+YP E+E L PGI + V G+ + +
Sbjct: 423 HSGDLGVMDENGFVVITGRIKDMIIRGGENIYPREIEEFLYTMPGIADVQVAGVPSRKYG 482
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A + LR K++ ++ E ++ CR + + K P+ ++ + +
Sbjct: 483 EEVGAFIILR----------------KDVEMAPEDVKDFCRGQ-IAWHKIPK-YIAFVEE 524
Query: 536 FPLTSTGKIRRDEVRR 551
FPLT++GK+++ ++R
Sbjct: 525 FPLTTSGKVQKYKLRE 540
>gi|324997477|ref|ZP_08118589.1| AMP-binding domain protein [Pseudonocardia sp. P1]
Length = 571
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 241/560 (43%), Gaps = 63/560 (11%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I R AA +++V + R T Q +DV LA GLL G+ +GD + I A N
Sbjct: 43 IGDNFDRTAAAFGDNDALVEVATGRRWTYTQLREDVDRLAYGLLAAGVATGDRLGIWAPN 102
Query: 67 -SEWYLEWILAVAFIGGIVAPLN--YR---WSFKEASRAITSIRPVMLVTDESSDSWYLE 120
+EW L A A +G ++ +N YR F I+++ + + E
Sbjct: 103 MAEWTLTQ-YATAKLGVVLVNINPSYRTHELEFVLKQAGISTLVAAREFKTSNYEKMIAE 161
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
++ LR V + S AD ++ +++ S A + + I +TS
Sbjct: 162 VRGNCPDLLR--VVIAGSDEWAALAAGGAAADRVRLAEIQA-----SLAADDPINIQYTS 214
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKG +SH ++ + GY E D P H G+
Sbjct: 215 GTTGFPKGATLSHHNILNNGYYVGKLCGYTEADRVCIPVPFYHCFGMVMGNLGCTTNGAT 274
Query: 241 VFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
+ IP F+ K+ L+AVEQ TSL VP + +A L S++ + G
Sbjct: 275 MVIPAQGFDPKATLKAVEQERCTSLYGVPTMF--IAELNDPDFASYDLSSLRTGIMAGSP 332
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
P E+MK+ ++ YGMTETS ++ T D +L+
Sbjct: 333 CPVEVMKQVVERMGMTEVTICYGMTETSP-VSTQTRADDSLDL----------------- 374
Query: 359 QPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
+ VG+ PH+E+KV + G + TRG VML YWDQ V
Sbjct: 375 --RVSTVGRVHPHLEVKVVDPETGKTLPRGEAGELCTRGYSVMLGYWDQPEKTAEVIDRA 432
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W+ TGDI +DD G V + GR + GGENVYP E+E L HP ++ V+G+ +A
Sbjct: 433 RWMHTGDIAVMDDEGYVNITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDA 492
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
R E + A V LRE ++ E L++ + L +K PR +VL
Sbjct: 493 RYGEELCAWVVLREG---------------AAAMTPESLKEFATGR-LAHYKIPR-YVLV 535
Query: 533 RKPFPLTSTGKIRRDEVRRE 552
FP+T TGK+R+ E+R +
Sbjct: 536 VDEFPMTVTGKVRKVEMREK 555
>gi|456388153|gb|EMF53643.1| long-chain-fatty-acid-CoA ligase [Streptomyces bottropensis ATCC
25435]
Length = 530
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 237/547 (43%), Gaps = 72/547 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R +V + R T +F DV LA L G+ GD V I A+N EW+L A
Sbjct: 34 DREMLVDLPSGRRWTYARFAADVDALAYALRASGVDKGDRVGIWAVNCP---EWVLVQYA 90
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVML---VTDESSD-SWYLELQHTAIPSLRWH 132
A IG I+ +N + E + +L ++ ++SD +E T P LR
Sbjct: 91 TARIGAIMVNINPAYRTHEVEYVLEQAGVSLLFASLSHKASDYRAMVEEVRTRCPRLRET 150
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V G S D A I +G +PF + + + I +TSGTTG PKG +S
Sbjct: 151 VYFGDPSWD---------ALIARG---TPVPF-EDLSCDDPINIQYTSGTTGFPKGATLS 197
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ + Y E D P H G+ +A GAC V P F++++
Sbjct: 198 HHNILNNGYFVGESLAYTERDRICVPVPFYHCFGMVMGNLAATSHGACVVIPAPSFDARA 257
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
LEAV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 258 TLEAVQRERCTSLYGVPTMF--IAELNLPDFGAYDLSSLRTGIMAGSPCPVEVMKRVVTE 315
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS T T D LE + VG+ P
Sbjct: 316 MHMREVSICYGMTETSPVST-QTRRDDDLEH-------------------RTATVGRVLP 355
Query: 371 HVELKVC------SDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+KV + G + TRG VML YW++ W+ TGD+ ++
Sbjct: 356 HIEVKVVDPVTGVTRPRGTAGELCTRGYSVMLGYWEEPEKTAEAVDPGRWMHTGDLATMR 415
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E V+ACV
Sbjct: 416 EDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKIADVQVVGVPHERYGEEVLACVIP 475
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LFVLWRKPFPLTSTGK 543
E + L+ E LR +C + L +K P L VL FP+T +GK
Sbjct: 476 HEGAE---------------PLTLEELRAYC-DGQLAHYKIPSALRVL--DSFPMTVSGK 517
Query: 544 IRRDEVR 550
+R+ E+R
Sbjct: 518 VRKIELR 524
>gi|116694665|ref|YP_728876.1| long-chain-fatty-acid--CoA ligase [Ralstonia eutropha H16]
gi|113529164|emb|CAJ95511.1| 4-Coumarate-CoA ligase [Ralstonia eutropha H16]
Length = 527
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 235/556 (42%), Gaps = 63/556 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + A ++ +V R T F ++ +A+ LL G G+ + NS+
Sbjct: 9 LPHAVRHFARLRPEAVAYAFEGRQTTYAGFERNTNRVAQALLAEGAGVGERIGYIGKNSD 68
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
Y E +L + IG ++ P ++R + E + V+L S + L A+P
Sbjct: 69 HYFELLLGASKIGAVMTPASWRLAPPEVEFILGHCDAVVLFVGAESAAMVRNLL-PALPM 127
Query: 129 LRWHVSLGSSSSD-----FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+R V + + + + RD + P H A ++ +TSGTT
Sbjct: 128 VRKVVVMEPCAGQGEWQCYTDWRD----------AQPDTPPAHQPAAHDVLLQLYTSGTT 177
Query: 184 GSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
G PKG +++H L V + + DDV L P+ HIGG + L+ GA
Sbjct: 178 GRPKGAMLTHRNLTIGTEVSERENLLWSHWVADDVSLVAMPVAHIGGSGWGLRNLLSGAK 237
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V +F+ ++ L+ +E+ ++ L VPA M + R ++ R +K +L G +
Sbjct: 238 GVVAREFDPRAVLDFIEKERISKLFLVPAAMQIVLRDPRARQVDYSR--LKYLLYGAAPI 295
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P+ L++E F + YGMTET+ ++ + D T E
Sbjct: 296 PAALLREGIEVF-GCGFVQQYGMTETTGTIVALPPEDHTTE-----------------EV 337
Query: 360 PQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
P+ GKP P VE+KV VG ++ R H M YW Q E W
Sbjct: 338 PRMRAAGKPLPGVEIKVVDYEGRQLAPGEVGELVVRSQHNMAGYWKQPEETARTIDAEGW 397
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L TGD G +D G +++ R I SGGENVYP EVE+ + HP + + VVG+ + +
Sbjct: 398 LRTGDAGYLDAEGYLYIHDRVKDMIISGGENVYPAEVESAIYGHPQVADVAVVGVPDEKW 457
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A V L+ ++ ++ + L GFK P+ + + +
Sbjct: 458 GEAVKAIVVLKPGQVPDQAGIIAWTRQR-----------------LAGFKVPK-SIEFVE 499
Query: 535 PFPLTSTGKIRRDEVR 550
P +GK+ R ++R
Sbjct: 500 ALPRNPSGKLLRRKLR 515
>gi|229018347|ref|ZP_04175217.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1273]
gi|229024576|ref|ZP_04181021.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1272]
gi|228736641|gb|EEL87191.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1272]
gi|228742936|gb|EEL93066.1| AMP-dependent synthetase and ligase [Bacillus cereus AH1273]
Length = 522
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 149/539 (27%), Positives = 248/539 (46%), Gaps = 68/539 (12%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ D +A+S N + A A +G + P N +
Sbjct: 36 RRITYKQLKNEVDCLATAFKRLGIGKADCIAVSLPNWSETVVIYFAAAKLGATIVPFNPK 95
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWY-----LELQHTAIPSLRWHVSLGSSSSDFVNK 145
+ E + S P +L+ E + + L + AI ++R+ +
Sbjct: 96 YKSFEIEYILKSSAPKLLIASEEFEKNFGFEKVLNMVQKAI-TVRFP------------Q 142
Query: 146 RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 205
++ T + L + + E I +TSGTTG+PKGV+++H A +VQS I
Sbjct: 143 ENLSTYEELMRTEIMDIEPVSINVNEDLFCILYTSGTTGTPKGVMVTHRA-VVQSAQTIG 201
Query: 206 I-VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 263
+ +DDV++ +APL HI G++ + + + +G V KF + L+ +EQ VT
Sbjct: 202 TELHCTQDDVFIISAPLFHIFGMAINMLCAVAMGGRIVLQEKFRPRETLQLIEQEKVTIQ 261
Query: 264 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VP + L K S++ L G +P++ + E L ++G+T
Sbjct: 262 KGVPTMFIKELELEDFDKY--DLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGIT 318
Query: 324 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-- 381
ET S MT YD T + N+T +GK P V LK+ +
Sbjct: 319 ETVS--ITMTSYDDTNQ----------NITET---------LGKAIPGVTLKIVDENRVA 357
Query: 382 ---SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGR 438
VG I G VM Y++ V E W +GD+G++DD G + VGR+
Sbjct: 358 LPPGEVGEIAVNGFGVMKGYYNMPEQTKQVLDNENWYYSGDLGTLDDQGYLRFVGRKKEM 417
Query: 439 IKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQS 498
I GG NVYP+E+EAV+++HP +I VVG+ + L E+ A +RL
Sbjct: 418 IIRGGLNVYPQEIEAVIMKHPKVIEAAVVGLPDKVLGEVACAVIRL-------------- 463
Query: 499 SKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
KN E+ E+ + + +E+ + +K P V++ FP+T++GKI++ ++R +V S++
Sbjct: 464 -KNGEVSTEEEI-KFYLKER-MAIYKLPEK-VIFTNEFPVTASGKIQKLKLREQVSSNI 518
>gi|323489937|ref|ZP_08095158.1| long-chain-fatty-acid--CoA ligase [Planococcus donghaensis MPA1U2]
gi|323396233|gb|EGA89058.1| long-chain-fatty-acid--CoA ligase [Planococcus donghaensis MPA1U2]
Length = 563
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 260/565 (46%), Gaps = 91/565 (16%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++ Q + A L ++G++ GD V+I N + + + GGIV N ++ +E
Sbjct: 52 EELYQSSMKFANYLQKLGIKKGDRVSIMLPNCPQAVISFYGILYAGGIVVMTNPLYTERE 111
Query: 96 --------ASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSS-SSDFVNKR 146
++AI S+ +L S +L++ + ++ +++ + F+ K+
Sbjct: 112 IVYQMNDAGAKAIISLD--ILFPRISKALKETQLENVIVTGIKDYLTFPKNLVYPFIQKK 169
Query: 147 -------------DMLTADILKGY--SLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ L +I+K ++ PF E ++ +T GTTGSPKGV++
Sbjct: 170 QYGMTVKVEHRGINHLFTEIMKTAQPTVVETPFDFE---EDLALLQYTGGTTGSPKGVML 226
Query: 192 SHSALIVQSL---AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFE 247
+H LI + + + GE+ + + PL H+ GL++ + + +M+G V +PKF+
Sbjct: 227 THKNLISNATMCDSWLYKCKKGEETI-MGIIPLFHVYGLTTVLILSVMLGNKMVLLPKFD 285
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
++AL+ + + T P + L + K S++ L+G LP+E+ +E
Sbjct: 286 PETALKTINKQKPTLFPGAPTLYIGLMNHPDIAKY--DLSSIEACLSGSAPLPAEV-QEK 342
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+ KL+ YG+TETS ++ L +G T SV G
Sbjct: 343 FEALTGGKLVEGYGLTETSP-VSHSNL-------------VWGERTKGSV--------GL 380
Query: 368 PAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
P P + K+ G++ +G I +G VM YW+ KP + + WL TG
Sbjct: 381 PYPDTDSKIFQTGTTTPIPNGEIGEIAIKGPQVMKGYWN----KPEETAATIVDGWLLTG 436
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G +DD G+ ++V R+ I +GG N+YP E+E VL +H + VV GI + E V
Sbjct: 437 DLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYEHEAVQECVVAGIPDPYRGETV 496
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A + L+E + +E E L +CRE+ L FK PR++ +RK P
Sbjct: 497 KAYIVLKEGYTVTE----------------EELNTYCREQ-LASFKVPRIYE-FRKELPK 538
Query: 539 TSTGKI-RRDEVRREVMSHLKSLPS 562
T+ GKI RR V EV +++PS
Sbjct: 539 TAIGKILRRSLVDEEVAKQNEAVPS 563
>gi|388601232|ref|ZP_10159628.1| AMP-binding domain protein [Vibrio campbellii DS40M4]
Length = 563
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 250/566 (44%), Gaps = 69/566 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ ++V+I N+ + Q+ V LA GLL IG++ GD VAI A N +EW + A
Sbjct: 37 KEALVSIHQNKRMSYQELNTKVNQLASGLLSIGVKEGDRVAIWAQNC---IEWTITQYAT 93
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRWHVSLG 136
A IG I+ +N + E A+ + V+++T S Y+EL IP L S
Sbjct: 94 AKIGAILVCINPAYKSLELEYALKKVNCSVLIMTRGFKGSNYIELIKQLIPQLGEQESNH 153
Query: 137 SSSSDFVNKRDMLTADILKG---YSLRSLPFTHSWAPEGAVIIC------------FTSG 181
+ +S + + ++ D K YS R L + IC FTSG
Sbjct: 154 AETSKLPSLKSLVLIDERKEKGFYSFRDLFLQDERGIKKVRTICASLRCDQPINIQFTSG 213
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACH 240
TTGSPKG ++H ++ + + + E D PL H G+ + L GAC
Sbjct: 214 TTGSPKGATLTHFNVLNNAFSIADKLAMDERDRLCIPVPLYHCFGMVGGNLTCLTAGACA 273
Query: 241 VFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
+ + F+ L+ +E T L VP + +A L + + +++ G
Sbjct: 274 ILCGESFDPLDTLKTIETESCTVLHGVPTMF--IAQLRTPELSNFNLSTLRTGAIAGATC 331
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P +L+ E L+ AYG TETS ++ DP Q
Sbjct: 332 PEDLIIEVQEKMRMDDLLIAYGQTETSPLSCMLSPQDPI--------------------Q 371
Query: 360 PQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+ VG+ H E+KV + +G+ + +G + TRG VML YW+ + E W
Sbjct: 372 KRLSTVGQVLRHTEVKVINLNGNIAERNTIGELCTRGYCVMLGYWNDEEKTSNTIDSEGW 431
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L +GD+ +DD G + +VGR I GGEN++P ++E VL I + V G+A+
Sbjct: 432 LHSGDLAVMDDEGYLSIVGRSKDLIIRGGENIFPRDIEDVLHGLETIEDVAVFGVADDYY 491
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A ++L + + SE + ++ + E+ + FK P + K
Sbjct: 492 GEKVCAWIKLAQGHKVSEDD----------------IKVYLSER-IAHFKVPSVIRFVDK 534
Query: 535 PFPLTSTGKIRRDEVRREVMSHLKSL 560
FPLT TGK+++ ++R + S +S+
Sbjct: 535 -FPLTVTGKLQKYKMREFMESEQRSM 559
>gi|302344469|ref|YP_003808998.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
gi|301641082|gb|ADK86404.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
Length = 548
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 150/563 (26%), Positives = 245/563 (43%), Gaps = 68/563 (12%)
Query: 11 QCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
Q L + AA ++VV + T QF V LA+GL+ +G+ G VA+ A N
Sbjct: 13 QILEQTAADYPDHDAVVYVDRGFRLTYSQFDAVVDELAKGLMALGVEPGQKVAVWASNVP 72
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIP 127
+++ A A IG I+ +N + E + S ++V D D+ +L++ + IP
Sbjct: 73 YWVALQFATAKIGAILLTVNTHYQRAELDYLLKQSETENLVVADRFRDNDFLDIVYELIP 132
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP----------------FTHSWAPE 171
LR S F + R + D K + S+P + P+
Sbjct: 133 ELRTQERGHLHSPRFPHLRRVFFLDQEKHRGMYSIPEVLAMSRMVSDERLAAVKAAQKPD 192
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSA 230
V + +TSGTTG PKGV+++H ++ G DD PL H G +
Sbjct: 193 DVVNMQYTSGTTGFPKGVMLTHKSIGTNGYWIGKHQNLGPDDRVCLPVPLFHCFGCVLGV 252
Query: 231 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 290
MA + G+C V + +F+ + AVEQ T+L VP + +A L S++
Sbjct: 253 MAAVNHGSCMVILEEFDPVMVMSAVEQERCTALYGVPTMF--IAALTHRLFDKFDFSSLR 310
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
+ G P + M+E ++ YG+TE S +T
Sbjct: 311 TGIMAGSPCPVKTMREVMERMNMREVTICYGLTENSPVMT-------------------- 350
Query: 351 NVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-------GRILTRGAHVMLRYWDQFL 403
P+ + + VGK P +E+K+ D SHV G + RG VM Y++
Sbjct: 351 QTLPDDDVRRRTETVGKAMPGIEVKIV-DPESHVELPTGTIGEVCCRGYSVMKGYYNMPE 409
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
A + WL +GD+G +D G + + GR I GGEN+YP EVE + PG+
Sbjct: 410 ATAQAIDHDGWLHSGDLGVLDADGYLAITGRYKDMIIRGGENIYPLEVEEFIRHIPGVRD 469
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
+ VVG+ + + E V A ++L E L++E +R CR + ++ +
Sbjct: 470 VQVVGVPSQKYGEQVGAFIQLAEGAD----------------LTAEDVRDLCRGQ-ISRY 512
Query: 524 KAPRLFVLWRKPFPLTSTGKIRR 546
K P+ +V + +PLT++GK+++
Sbjct: 513 KIPK-YVAMVEAYPLTASGKVQK 534
>gi|419961133|ref|ZP_14477142.1| AMP-binding domain protein [Rhodococcus opacus M213]
gi|414573454|gb|EKT84138.1| AMP-binding domain protein [Rhodococcus opacus M213]
Length = 545
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 158/555 (28%), Positives = 246/555 (44%), Gaps = 62/555 (11%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWIL 75
A R+++V R T + +DV +A GLL+ G+ GD V I A N EW L
Sbjct: 32 AHADRDALVDRPSGRRWTYAELRRDVDAVAVGLLKRGIGKGDRVGIWAPNCPEWTL-IQF 90
Query: 76 AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRW 131
A A IG ++ +N + E + +LV+ +SSD + +E P L
Sbjct: 91 ATAKIGAVLVNINPAYRAHELKYVLDQAGIRLLVSAPEFKSSDYAGMIEEVRPQCPDLER 150
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRS--LPFTHS-WAPEGAVIICFTSGTTGSPKG 188
V LGS+ + L +D + ++ LP + + + + I +TSGTTG PKG
Sbjct: 151 VVLLGSA------EWSKLASDGMAAHAADPSLLPAAQAALSSDDPINIQYTSGTTGFPKG 204
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKF 246
+SH ++ + Y E+D P H G+ +A GA V P F
Sbjct: 205 ATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACTSHGATMVIPGPSF 264
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ K+ L+AVE TSL VP + +A L S++ + G P E+MK+
Sbjct: 265 DPKATLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEVMKQ 322
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A++ YGMTETS ++ T D T++ + VG
Sbjct: 323 VIEQMGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVSTVG 362
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+K+ + G + TRG VML YW+ W+ TGDI
Sbjct: 363 RVGPHLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTGDI 422
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++
Sbjct: 423 GVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMV 482
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
VR+++ + L + +R+ C K L +K P+ +V FP+T
Sbjct: 483 WVRMKDGAE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFPMTV 525
Query: 541 TGKIRRDEVRREVMS 555
TGK+R+ E+R + +
Sbjct: 526 TGKVRKVEMREQSLD 540
>gi|302530557|ref|ZP_07282899.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
gi|302439452|gb|EFL11268.1| dicarboxylate-CoA ligase PimA [Streptomyces sp. AA4]
Length = 546
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 155/553 (28%), Positives = 249/553 (45%), Gaps = 65/553 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW-YLEWILAVA 78
R+++V T ++ +V LA GLL G+ GD V I + N +EW +L++ A A
Sbjct: 32 RDALVDREAGARWTYRELAAEVDTLAHGLLASGIGKGDRVGIWSPNRAEWTFLQY--ATA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAITS--IRPVMLVTDESSDSWY---LELQHTAIPSLRWHV 133
IG I+ +N + E + IR +++ D+ S Y +E P L V
Sbjct: 90 KIGAILVNINPAYRSHELKYVLNQAGIR-LLVAADKFKTSDYAAMIEEVRPDCPGLEAVV 148
Query: 134 SLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
LG+SS +D + G R + + + I +TSGTTG PKG +S
Sbjct: 149 LLGTSSWTDLMESGR-------GGDPARLAQLQAGLSADDPINIQYTSGTTGFPKGATLS 201
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ + Y E+D P H G+ +A GAC V P F+ K+
Sbjct: 202 HHNILNNGYFVGELCNYTEEDRVCIPVPFYHCFGMVMGNLACTSHGACMVIPAPAFDPKA 261
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV TSL VP + +A L + S++ + G P E+MK+ +
Sbjct: 262 TLAAVAAERCTSLYGVPTMF--IAELNHPEFETFDLGSLRTGIMAGSPCPVEVMKQVIDR 319
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS ++ T D ++E + VG+ P
Sbjct: 320 MGMTEVSICYGMTETSP-VSTQTRADDSVER-------------------RVSTVGRVGP 359
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E KV + G + TRG VML YW++ W+ TGD+ +D
Sbjct: 360 HLESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWEEPEKTAEAIDAARWMHTGDLAIMD 419
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G + + GR + GGEN+YP E+E L HP ++ V+G+ + + E ++A +R+
Sbjct: 420 DEGYLNITGRIKDMVIRGGENIYPREIEEFLYTHPDVLDAQVIGVPDVKYGEELMAWIRM 479
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
RE + L+ E +R+ C+ K L +K PR ++ + FP+T TGK+
Sbjct: 480 REGAE---------------PLTVESVREFCQGK-LAHYKIPR-YIHVVEEFPMTVTGKV 522
Query: 545 RRDEVRREVMSHL 557
R+ E+R++ ++ L
Sbjct: 523 RKVEMRQQSVTLL 535
>gi|386396719|ref|ZP_10081497.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385737345|gb|EIG57541.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 525
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 155/567 (27%), Positives = 250/567 (44%), Gaps = 71/567 (12%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
M A++ + A + N++ R + +F +A L+ +G+R G+ +
Sbjct: 1 MTTQPLANLADMVRERAKSRGNAIAFEFEGRVTSFAEFDVKTNKVANALIAMGVRRGERI 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYL 119
A NS+ Y E ++ G ++AP+N+R + E + ++ + PV+ V E ++
Sbjct: 61 AYLGKNSDIYFELLMGAMKAGVVMAPVNWRLAGPEVAFIVSDCKAPVLFVGPE-----FI 115
Query: 120 ELQHT---AIPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 173
L +P +R ++ + DF RD + D K +P +
Sbjct: 116 ALVRQIKGQLPGVRSVITTEGGAPEWQDFTAWRDAQSGDDPK------VPIDA----KDI 165
Query: 174 VIICFTSGTTGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
I +TSGTTG PKG ++SH+ + VQ+ K + DDV L P+ HIGG
Sbjct: 166 AIQLYTSGTTGKPKGAMLSHANFLNLVQTGNAEDKPEWNRWSTDDVSLVAMPIFHIGGSG 225
Query: 229 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 288
+ L GA V +F+ L++ EQ +T L VPA M + R + R
Sbjct: 226 WGVMGLYHGARGVIAREFDPTKVLDSFEQSGITKLFMVPAAMQFVVRQPRARTVDFSR-- 283
Query: 289 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 348
+K +L G +P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 284 LKYMLYGASPIPAALLKECIEIF-KCGFVQMYGMTETTGTIVALPPED-HIEGLERMRSA 341
Query: 349 FGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFL 403
GK P VE+ + DG VG I TR M YW+
Sbjct: 342 -----------------GKALPGVEIAILDVDGKPLPPREVGEIATRSGSNMAGYWNLPE 384
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
A + G+ WL TGD G +D+ G +++ R I SGGEN+YP EVE+ L HP +
Sbjct: 385 ATAATLRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENIYPAEVESALCDHPDVAE 444
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
V+GI + + E V A V ++ Q + ++ + RE+ + GF
Sbjct: 445 AAVIGIPDDKWGEAVKAVVVMKPGKQATATD----------------IINFTRER-IAGF 487
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVR 550
K P+ V + P +GKI R ++R
Sbjct: 488 KTPKS-VEFLPALPRNPSGKILRRQLR 513
>gi|91785731|ref|YP_560937.1| AMP-binding protein [Burkholderia xenovorans LB400]
gi|91689685|gb|ABE32885.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia xenovorans
LB400]
Length = 576
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 269/592 (45%), Gaps = 90/592 (15%)
Query: 5 SQAHICQCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
S+A I Q L A R +VV T Q+FV++V LA GLL +G+ GD V I
Sbjct: 30 SEATIGQFLRDTAERFPDRPAVVFREQRIRWTWQEFVEEVDVLAAGLLALGIEKGDRVGI 89
Query: 63 SALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWY 118
+ N +EW+L A A IG ++ +N + E A+ + ++ E S Y
Sbjct: 90 WSPNR---VEWLLTQFATARIGAVLVNINPAYRLAELEYALNKVGCKAIIAAERFKTSMY 146
Query: 119 LE----------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLT-ADILK-GYSLR 160
LE L + +P LR+ + + + + ML+ +D+++ G +
Sbjct: 147 LEMLQELAPELATQAPGELHASRLPELRYVIRMCDTETP-----GMLSFSDVIEEGRASL 201
Query: 161 SLPFTHSWAPEGAVIIC-------FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+P + GA + C FTSGTTG+PKG ++H ++ + + E D
Sbjct: 202 DVPTLDAI---GATLSCRDPINIQFTSGTTGNPKGATLTHRNVVNNARYIAMAMRLTEQD 258
Query: 214 VYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMA 271
PL H G+ S +A + VGA VF + F+ ++L AV + T+L VP +
Sbjct: 259 GLCIPVPLYHCFGMVLSVLACVSVGANMVFPGEGFDPAASLAAVAEEQCTALHGVPTMF- 317
Query: 272 DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF 331
+A L ++ + G P E MK+ + ++ AYGMTETS
Sbjct: 318 -IAELDHPDFATYDLSRLRTGIMAGSPCPIETMKKVVSRMHLGEITIAYGMTETS----- 371
Query: 332 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GR 386
P +F + T + + + + VG+ PH+E+K+ + V G
Sbjct: 372 --------------PVSFQSSTTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGE 416
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
+ TRG VM YWD AK S + W+ TGD+ ++D G +VGR + GGEN+
Sbjct: 417 LCTRGYSVMQGYWDD-EAKTRESIVDGWMHTGDLATLDAEGYCNIVGRLKDMLIRGGENI 475
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
YP E+E L +HP I + V G+ +++ E V A V LR Q
Sbjct: 476 YPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWVVLRAGEQ----------------A 519
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
++E ++Q C + + +K P+ ++ + P+T TGK+++ +R ++S LK
Sbjct: 520 TAEEIQQFC-QGQIAHYKVPK-YIRFVDELPMTVTGKVQKFIMRERMISELK 569
>gi|357402331|ref|YP_004914256.1| Acyl-CoA synthetase member 2 [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337768740|emb|CCB77453.1| Acyl-CoA synthetase family member 2, mitochondrial [Streptomyces
cattleya NRRL 8057 = DSM 46488]
Length = 544
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 167/575 (29%), Positives = 243/575 (42%), Gaps = 75/575 (13%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R A R ++V R + F +V LAR LL G+ GD V I A+N
Sbjct: 20 IGRNLDRAVAAWPDRPALVDAATGRRWSYAGFAAEVDRLARALLAYGVTKGDRVGIWAVN 79
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH 123
EW+ A A IG ++ +N + E + +L+ + S
Sbjct: 80 CP---EWVFTQYATARIGAVLVNVNPAYRTHELGYVLRQSGVSLLIASTAYKSSDYVAMA 136
Query: 124 TAI----PSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
A+ P LR V +G++ + + + + AD R+ + V I +
Sbjct: 137 AAVREECPGLRHTVHIGTAGWRELLAAGETVPAD-------RTAAAQAALDCREPVNIQY 189
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 237
TSGTTG PKG +SH ++ ++GY E D P H G+ +A G
Sbjct: 190 TSGTTGFPKGATLSHRNILNNGYFVGELLGYTEADRVCLPVPFYHCFGMVMGNLAATSHG 249
Query: 238 ACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKIL 293
AC V P F+ + L AV T+L VP + +A+L + G D S++ +
Sbjct: 250 ACVVIPAPVFDPAATLRAVRDEGCTALYGVPTMFIAELGL-----PDFAGYDLSSLRTGI 304
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+MK A++ YGMTETS T T D LE
Sbjct: 305 MAGSPCPVEVMKRVVGEMHMAEVAICYGMTETSPVST-QTRRDDDLER------------ 351
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PH+E++V + G + TRG VML YW+
Sbjct: 352 -------RTATVGRVLPHLEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDPERTAE 404
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
V G+ W+ TGD+ + + G + + GR I GGENVYP E+E L HP I + VV
Sbjct: 405 VIDGDGWMHTGDLAVMREDGYLTITGRIKDMIIRGGENVYPREIEEFLHTHPKIADVQVV 464
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + R E V+ACV R+ + E + HCR + L FK PR
Sbjct: 465 GVPDERYGEEVLACVIPRDPADPP---------------TLEEVTAHCRGR-LAHFKIPR 508
Query: 528 LFVLW-RKPFPLTSTGKIRRDEVRREVMSHLKSLP 561
L LW FP+T +GK+R+ E+R S P
Sbjct: 509 L--LWVLDSFPMTVSGKVRKVELRERFAGPDHSGP 541
>gi|192288893|ref|YP_001989498.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
TIE-1]
gi|192282642|gb|ACE99022.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 564
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 163/576 (28%), Positives = 250/576 (43%), Gaps = 68/576 (11%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L R A+ R ++V+ + + T + F V LA G L +GL G + I ++N
Sbjct: 22 IGQALDRAVALWPDREALVSPSHDTRWTWRDFAARVDALAAGFLALGLERGARIGIWSMN 81
Query: 67 S-EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE---- 120
EW L A A G I+ +N + E A+ + LVT + S Y+E
Sbjct: 82 RPEWTLTQ-FAAAKAGLILVTINPAYRLSELEFALAKVGCAALVTATAFKTSHYMEMLNT 140
Query: 121 ------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 168
LQ +P LR + +G + D + A + + F
Sbjct: 141 LIPELATSPPGALQSAKLPKLRTVIQIGGPKAPGTIAFDEVAAMGGARHRDQIAAFASEL 200
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
+ AV I FTSGTTGSPKGV ++H ++ + E D PL H G+
Sbjct: 201 QFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMKLTEADRICIPVPLYHCFGMV 260
Query: 229 SA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+A + GA V+ + F+ L+ + T+L VP + +A L +
Sbjct: 261 MGNLASVTSGAAMVYPGEGFDPLVTLQTASREKCTALYGVPTMF--IAELDHPEFASFDL 318
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
S++ + G P E+M+ ++ ++ AYGMTETS ++F + D E
Sbjct: 319 SSLRTGIMAGAPCPVEVMRRVNDAMNMREVTIAYGMTETSP-VSFQSAVDDPEER----- 372
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQ 401
+ VG+ PHVE+KV DG G + TRG VML YWD+
Sbjct: 373 --------------RVSTVGRIHPHVEVKVVDLDGKIVPRGQRGELCTRGYSVMLGYWDE 418
Query: 402 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
V W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I
Sbjct: 419 AEKTADVLDAAGWMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKI 478
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
+ + G+A+ R E + A VR R L+++ +R C + +
Sbjct: 479 QDVQIFGVADDRYGEELCAWVRPRPGET----------------LTADDVRAFC-QGQIA 521
Query: 522 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
K PR ++ + FP+T TGKI++ +R +V S L
Sbjct: 522 HNKIPR-YIEFVDEFPMTVTGKIQKFIMREKVESKL 556
>gi|239831428|ref|ZP_04679757.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
gi|239823695|gb|EEQ95263.1| AMP-dependent synthetase and ligase [Ochrobactrum intermedium LMG
3301]
Length = 571
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 158/569 (27%), Positives = 254/569 (44%), Gaps = 76/569 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R +VV N T + Q LA G L IGLR G+ + I + N+ LEWIL A
Sbjct: 42 ERPAVVIRHQNIRLTYSELRQRTDELAEGFLAIGLRPGERLGIWSPNN---LEWILTQFA 98
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP-------- 127
A G I+ +N + E + + L+ S S Y+++ + +P
Sbjct: 99 SAKAGLILVNINPAYRAHELEYVLGKVECAALILAPSLKSSNYIDILRSIVPQLDEARPG 158
Query: 128 --------SLRWHVSLGSSSS-DFVNKRDML-TADILKGYSLRSLPFTHSWAPEGAVIIC 177
SLR + LG+ + +N D+ + D + L L + + + I
Sbjct: 159 HLMSGRLPSLRCVIRLGTEQTPGMLNFDDVAQSGDEVTRQELAQLADELQF--DDPINIQ 216
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMV 236
FTSGTTGSPKG +SH ++ + E D P H G+ +A +
Sbjct: 217 FTSGTTGSPKGATLSHHNILNNGFFVGEAMQLSEQDRLCIPVPFYHCFGMVLGNLACVTH 276
Query: 237 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
G+C V IP F+ L+ VE+ T L VP + +A L + S++ +
Sbjct: 277 GSCMV-IPNDSFDPFLTLQTVEEEQCTGLHGVPTMF--IAMLDHPDFSRFDLSSLRTGIM 333
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G P E+M+ + + ++ AYGMTETS P +F + T
Sbjct: 334 AGSPCPIEVMRRVVSEMHQGEITIAYGMTETS-------------------PVSFQSSTS 374
Query: 355 NSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVS 409
+ + + + VG+ PH+E+K+ +DG G +LTRG VM YW+ +
Sbjct: 375 DPLER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAGAI 433
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I + + GI
Sbjct: 434 DDAGWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFAHPAISDVQIFGI 493
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E++ A V+L + Q SE E L ++CR++ + +K P
Sbjct: 494 PDRKFGEIICAWVKLHKDAQLSE----------------EDLSEYCRQR-IAHYKVP-AH 535
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
+ + FP+T TGKI++ +R+ ++ L+
Sbjct: 536 IRFVDQFPMTVTGKIQKFVMRQAMIEELE 564
>gi|432340260|ref|ZP_19589709.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
gi|430774710|gb|ELB90289.1| AMP-binding domain protein [Rhodococcus wratislaviensis IFP 2016]
Length = 546
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 245/553 (44%), Gaps = 62/553 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R+++V R T + +DV A GLL+ G+ GD V I A N EW L A A
Sbjct: 36 RDALVDRPSGRRWTYAELRRDVDAAAAGLLKRGIGKGDRVGIWAPNCPEWTL-IQFATAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHVSL 135
IG ++ +N + E + +LV+ +SSD + +E P L V L
Sbjct: 95 IGAVLVNINPAYRAHELKYVLDQAGIRLLVSAPEFKSSDYAAMIEEVRPQCPDLEMVVLL 154
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRS--LPFTHS-WAPEGAVIICFTSGTTGSPKGVVIS 192
GS+ + L +D + ++ LP + + + + I +TSGTTG PKG +S
Sbjct: 155 GSA------EWSRLASDGMAAHAADPSLLPAAQAALSSDDPINIQYTSGTTGFPKGATLS 208
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESKS 250
H ++ + Y E+D P H G+ +A GA V P F+ K+
Sbjct: 209 HHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACTSHGATMVIPGPSFDPKA 268
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+AVE TSL VP + +A L S++ + G P E+MK+
Sbjct: 269 TLQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEVMKQVIEQ 326
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
A++ YGMTETS ++ T D T++ + VG+ P
Sbjct: 327 MGMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVSTVGRVGP 366
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+K+ + G + TRG VML YW+ W+ TGDIG +D
Sbjct: 367 HLEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTGDIGVMD 426
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++ VR+
Sbjct: 427 SDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRM 486
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
++ + L + +R+ C K L +K P+ +V FP+T TGK+
Sbjct: 487 KDGTE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFPMTVTGKV 529
Query: 545 RRDEVRREVMSHL 557
R+ E+R + + L
Sbjct: 530 RKVEMREQSLDLL 542
>gi|359451343|ref|ZP_09240747.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20480]
gi|358042834|dbj|GAA76996.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20480]
Length = 577
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 255/564 (45%), Gaps = 70/564 (12%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIG 81
+VV N T ++F ++V LA GLL IG++ GD V I S N +W L A A IG
Sbjct: 53 AVVVNHQNIRLTYKEFQKEVNQLAMGLLAIGVKPGDRVGIWSPNNIQWCLTQ-FATAKIG 111
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I+ +N + E A+ S+ L+T + S Y+E+ ++ P L+ S S+
Sbjct: 112 AIMVCINPAYRPNELQYALNSVECSTLITASQFKASNYIEMLNSLAPELKHCDSGKLSAK 171
Query: 141 DFVNKRDMLT------------ADILK----GYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
N ++++ +DI++ + L + E + I FTSGTTG
Sbjct: 172 ALPNLKNVIRIGNEVSAGMFSFSDIMRMATPAHELELNAIAANLNAEQDINIQFTSGTTG 231
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
+PKG ++H ++ +L + + E D PL H G+ + + P
Sbjct: 232 NPKGATLTHKNILNNALFVGDSMHFTEHDKLCIPVPLYHCFGMVLGSLLCVTKGAAAIYP 291
Query: 245 K--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
F++K+ L+ +EQ T+L VP + L T+ D +++ + G P
Sbjct: 292 SDSFDAKTTLDVIEQEGCTALHGVPTMFISQLEL----STFSEYDLSTLRTGVMAGSTCP 347
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
++M++ +++ AYG TE S + +T D ++E
Sbjct: 348 EQVMRKVQTQMNMHQVLIAYGQTE-CSPINNITETDSSIER------------------- 387
Query: 361 QGVCVGKPAPHVELKVCSD-GSSHV----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
Q VG+ H E+K+ + G+ G + ++G +M YW+ + + WL
Sbjct: 388 QVTTVGRALAHTEVKIIDELGNIQKIGLPGEVCSKGVGIMRCYWNDEEKTKATIDSDGWL 447
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD+G +D G V +VGR I GGENVYP E+E VL +PGI V GI++ +
Sbjct: 448 HSGDLGVMDSEGFVSIVGRIKDMIIRGGENVYPREIEEVLYTYPGIQDAAVFGISDEKYG 507
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A ++ +E + L + +R +K L FK PR ++ + +
Sbjct: 508 EEVCAWIQPKE----------------DTTLDEQAIRAFLHDK-LAYFKMPR-YIRFVES 549
Query: 536 FPLTSTGKIRRDEVRREVMSHLKS 559
+P+T TGK+++ ++R ++ L S
Sbjct: 550 YPMTVTGKLQKFKMREQMQEVLSS 573
>gi|226312168|ref|YP_002772062.1| acyl-CoA synthetase [Brevibacillus brevis NBRC 100599]
gi|226095116|dbj|BAH43558.1| probable O-succinylbenzoate--CoA ligase [Brevibacillus brevis NBRC
100599]
Length = 508
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 149/566 (26%), Positives = 249/566 (43%), Gaps = 92/566 (16%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + I + T QQ + + +A L E+ ++ GD + I + NS
Sbjct: 4 IAYWIEKRARITPTRIAVIANEQSLTYQQMNEQIQRVANYLRHELQVKKGDRIGILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYR-------WSFKEASRAITSIRP-----VMLVTDESSD 115
Y+ + A+A +G I P N R + F+++ + +P + L+ ++S
Sbjct: 64 LEYVLLLFAIAKLGAIAVPFNIRLTPAELDYQFEDSGIRVLCAQPEFAATIELIKAKASV 123
Query: 116 SWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+ + L+ +P W S SS + + AD G + I
Sbjct: 124 AHMIWLEPGELP---WSQDGPSESS----QHSRIDADDGSG--------------DDPYI 162
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 234
IC+TSGTTG PKG V++ + S+ +A + +D + PL HIGG+ A
Sbjct: 163 ICYTSGTTGKPKGAVLTQENMFWNSVHNVAALDLTSEDCSIVLLPLFHIGGIGLFAFPTW 222
Query: 235 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
+ G V KF+ A++ +E H VT ++ VPAI + T DSV+ N
Sbjct: 223 LAGGRVVVAGKFDPDKAIQLIETHRVTIVMGVPAIHEAIRQSPLFATT--SFDSVRWFYN 280
Query: 295 GGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
GG P EL++ P + YG+TETS ++ FM + G
Sbjct: 281 GGAPCPMELIQHFQERGLPFGQ---GYGLTETSPTV-FMIAKEDARRKAG---------- 326
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 408
+GKP E+++ SD G +G +L +G +VM YW+ +P
Sbjct: 327 ----------SIGKPVMFCEVRLISDDGKDVGQGEIGELLVKGPNVMKEYWN----RPEE 372
Query: 409 STGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ + WL TGD+ D+ G ++VGRR I SGGEN+YP E+E V+ + G+
Sbjct: 373 TANTIRDGWLYTGDLARFDEEGFAYIVGRRKDMIISGGENIYPLELEQVIGELDGVQEAA 432
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
VVG+ + + E+ A + + +E++ +++HC E+ L +K
Sbjct: 433 VVGVPDEKWGEVAKAFIVPKSGAVITEAH----------------IKEHC-EQRLAKYKI 475
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRR 551
P+ FV + P +TGKI + + R
Sbjct: 476 PKSFVFLTE-LPRNATGKIVKQALTR 500
>gi|119964094|ref|YP_948746.1| long chain fatty acid-CoA ligase [Arthrobacter aurescens TC1]
gi|119950953|gb|ABM09864.1| putative long chain fatty acid-CoA ligase [Arthrobacter aurescens
TC1]
Length = 558
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 250/550 (45%), Gaps = 73/550 (13%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
Q+ DV LAR LL +G+ G+ + I + N +EW + A A IG ++ +N +
Sbjct: 52 QKLNDDVDRLARALLAMGVAKGERIGIWSPNCAEWTI-LQYATAKIGAVLVNVNPAYRTH 110
Query: 95 EASRAITSIRPVMLV---TDESSDSWYLELQHTA---IPSLRWHV----------SLGSS 138
E + MLV +D++SD Y+ + A P LR V +LG
Sbjct: 111 ELEFVVKQNGMRMLVAAPSDKNSD--YVGMARDAASNCPELREIVFLPGAPELGLTLGVP 168
Query: 139 SSDF-VNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+D + ++LT AD + +LR P + + +TSGTTG PKG ++H +
Sbjct: 169 EADHELTYAELLTRADGVGTSALRDR--MGELDPYDPINLQYTSGTTGFPKGATLTHHNI 226
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK--FESKSALE 253
+ + ++ Y E D + P H G+ + L GA + IP F + +ALE
Sbjct: 227 LNNGHSIGRLLNYTEHDRVVIPVPFYHCFGMVIGNLNALSFGAATI-IPGRGFNASAALE 285
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AV+ TSL VP + +A L +++ + G P E+M+ +
Sbjct: 286 AVQDFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMRRVIDEMHM 343
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+ YGMTETS T MT TLE + VG+ PH+E
Sbjct: 344 VDVAICYGMTETSPVST-MTRAGDTLEQ-------------------RTSTVGRTMPHLE 383
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
++ GS V G + TRG VM YW Q E W+ TGD+ +D+ G
Sbjct: 384 SRIIDPGSMEVVERGVIGELCTRGYSVMQGYWGQPDKTAEAIDAEGWMHTGDLARMDEDG 443
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ + GR + GGEN+YP E+E L HP I + V+G+ + + E ++AC+ L
Sbjct: 444 YLVIEGRIKDMVIRGGENIYPREIEEFLYLHPSIQDVQVIGVPDEKYGEELMACIIL--- 500
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
K L++E L ++CR K L +K PR +V R+ FP+T +GK+R+
Sbjct: 501 ------------KPGSPALTAEELAEYCRGK-LAHYKIPR-YVDVRESFPMTVSGKVRKV 546
Query: 548 EVRREVMSHL 557
++R+E +S L
Sbjct: 547 DMRQEAVSRL 556
>gi|421470089|ref|ZP_15918496.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
gi|400228507|gb|EJO58436.1| AMP-binding enzyme [Burkholderia multivorans ATCC BAA-247]
Length = 575
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 251/575 (43%), Gaps = 88/575 (15%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+R +VV T ++F ++ LA GL +G+ GD V I + N SEW L A A
Sbjct: 46 ERPAVVFREQQVRWTWREFAAEIDVLAAGLAALGIEKGDRVGIWSPNRSEWLLTQ-FATA 104
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTA------------ 125
IG I+ +N + E A+ + ++ + S Y+E+ T
Sbjct: 105 RIGAILVNINPAYRLAELEYALNKVGCKAVIAAERFKSSAYVEMLQTIAPELANAAPGEL 164
Query: 126 ----IPSLRWHVSLGSSSSDFVNKRDMLTADIL-------KGYSLRSLPFTHSWAPEGAV 174
+PSLR VS+G D AD++ +L +L T AP +
Sbjct: 165 RAARVPSLRTVVSMG----DVAPPGMFRFADVIARGRASVDSAALDALGAT--LAPSDPI 218
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAM 233
I FTSGTTGSPKG ++H ++ + + + E D PL H G+ A +A
Sbjct: 219 NIQFTSGTTGSPKGATLTHRNVVNNARFIAMAMRFTEQDALCIPVPLYHCFGMVLAVLAC 278
Query: 234 LMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
+ GA VF + F+ + L AV + T+L VP + +A L + +++
Sbjct: 279 VSTGAAMVFPGEAFDPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTG 336
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P E MK + +++ AYGMTETS ++F + D LE
Sbjct: 337 IMAGSPCPIETMKRVVSQMHLSEITIAYGMTETSP-VSFQSSTDDPLEK----------- 384
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PH+E+K+ V G + T+G VML YWD
Sbjct: 385 --------RTTTVGRVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD-----D 431
Query: 408 VSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
T EV W+ TGD+ ++D G +VGR + GGENVYP E+E L +HP I
Sbjct: 432 AKTREVLIDGWMHTGDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQS 491
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
V G+ + + E + A + LR Q +E + +R C + + +
Sbjct: 492 AQVFGVPDPKYGEELCAWIVLRADEQMAEDD----------------VRAFC-QGQIAHY 534
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 535 KIPR-YIRFVDELPMTVTGKVQKFVMRERMIDELK 568
>gi|221202175|ref|ZP_03575210.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
gi|221208764|ref|ZP_03581763.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221171396|gb|EEE03844.1| AMP-binding domain protein [Burkholderia multivorans CGD2]
gi|221177969|gb|EEE10381.1| AMP-binding domain protein [Burkholderia multivorans CGD2M]
Length = 575
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 157/561 (27%), Positives = 246/561 (43%), Gaps = 88/561 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA GL +G+ GD V I + N SEW L A A IG I+ +N +
Sbjct: 60 TWREFAAEIDVLAAGLAALGIEKGDRVGIWSPNRSEWLLTQ-FATARIGAILVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ + S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCKAVIAAERFKSSAYVEMLQTIAPELANAAPGELRAARVPSLRTVVSM 178
Query: 136 GSSSSDFVNKRDMLTADIL-------KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
G D AD++ +L +L T AP + I FTSGTTGSPKG
Sbjct: 179 G----DVAPPGMFRFADVIARGRASVDSAALDALGAT--LAPSDPINIQFTSGTTGSPKG 232
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-F 246
++H ++ + + + E D PL H G+ A +A + GA VF + F
Sbjct: 233 ATLTHRNVVNNARFIAMAMRFTEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAF 292
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L AV + T+L VP + +A L + +++ + G P E MK
Sbjct: 293 DPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMKR 350
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ +++ AYGMTETS ++F + D LE + VG
Sbjct: 351 VVSQMHLSEITIAYGMTETSP-VSFQSSTDDPLEK-------------------RTTTVG 390
Query: 367 KPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDT 417
+ PH+E+K+ V G + T+G VML YWD T EV W+ T
Sbjct: 391 RVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD-----DAKTREVLIDGWMHT 445
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ ++D G +VGR + GGENVYP E+E L +HP I V G+ + + E
Sbjct: 446 GDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEE 505
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+ A + LR Q +E + +R C + + +K PR ++ + P
Sbjct: 506 LCAWIVLRADEQMTEDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELP 547
Query: 538 LTSTGKIRRDEVRREVMSHLK 558
+T TGK+++ +R ++ LK
Sbjct: 548 MTVTGKVQKFVMRERMIDELK 568
>gi|46199401|ref|YP_005068.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
gi|46197026|gb|AAS81441.1| long-chain-fatty-acid-CoA ligase [Thermus thermophilus HB27]
Length = 560
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 154/544 (28%), Positives = 240/544 (44%), Gaps = 89/544 (16%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
A+GL ++G+R GD VAI NS ++ GG+ +N ++ +E +
Sbjct: 64 FAQGLKDLGVRPGDRVAIMLPNSPQFVIAFYGTLLAGGVGVNVNPLYTPRELRHQLADAG 123
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-----------KRDMLT--- 150
LV + YLE++ +P R V+ DF+ KRD L
Sbjct: 124 AETLVILDHLLPRYLEVEKE-VPVKRVVVT---GIKDFLPFPKNLLYPLKAKRDGLPLGF 179
Query: 151 ---------ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
A++LK R H PE ++ +T GTTG KG +++H L+ L
Sbjct: 180 PKREGFHAFAELLK----RPPAEPHVPDPEDLALLQYTGGTTGLSKGAMLTHKNLVANVL 235
Query: 202 AKIA-------IVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALE 253
A +VG G V L P H+ G++ AM L G V +P+ E K+ +E
Sbjct: 236 QIDAWDPTSKDLVGKG---VMLGALPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIKAIVE 292
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
A+E+H VT VP + ++K + S++ L+G LP E+ K
Sbjct: 293 AIEKHQVTHFPGVPTLYVAFNNFPGIEK--RNVKSIRICLSGAAPLPVEVAKR-FEELTG 349
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
A+LI YG++E S +T +P L G + S+ G P P V+
Sbjct: 350 ARLIEGYGLSEASP----VTHSNPVL----------GLIKKGSI--------GMPFPSVD 387
Query: 374 LKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
KV + VG + +G +VM YW++ + + + WL TGD+ +D+ G
Sbjct: 388 AKVVDEEGKELPPGEVGELAVKGPNVMKGYWNR-PEETQKTLKDGWLFTGDLAKMDEDGY 446
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
++V R+ I +GG N+YP EVE VL QH + VVG+ + E V A + L+ +
Sbjct: 447 FYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKPEY 506
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
Q S D + + CR+ NL +K PR+ + +R+ P +S GKI R E
Sbjct: 507 QGKVSEKD--------------IERFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRE 550
Query: 549 VRRE 552
+R E
Sbjct: 551 LREE 554
>gi|348170337|ref|ZP_08877231.1| AMP-binding domain protein [Saccharopolyspora spinosa NRRL 18395]
Length = 541
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 236/553 (42%), Gaps = 79/553 (14%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R+++V R T ++F +LA GLL G+ GD V I + N +EW L A A
Sbjct: 35 DRDALVECASGRRWTYREFGAAADSLAVGLLNAGIGKGDRVGIWSPNRAEWTL-IQYATA 93
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES---SDSWYLELQ-HTAIPSLRWHV- 133
IG I+ +N + E + +LV+ +S SD + + H P L V
Sbjct: 94 KIGAILVNINPAYRVHELEYVLNQAGVRLLVSAQSFKSSDYAAMVAEIHPRCPGLEQTVF 153
Query: 134 -------SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+L +S +D V L G L + + + I +TSGTTG P
Sbjct: 154 FDTPEWTALTASPADPVR---------LGGIGLST---------DDPINIQYTSGTTGFP 195
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK- 245
KG +SH ++ + GY EDD P H G+ + IP
Sbjct: 196 KGATLSHHNILNNGFFVGELCGYTEDDRICIPVPFYHCFGMVMGNLAATSHGAAMIIPAT 255
Query: 246 -FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F+ ++L +V TSL VP + +A L S++ + G P E+M
Sbjct: 256 GFDPAASLASVAAERCTSLYGVPTMF--IAELDHPDFDSFDLSSLRTGIMAGSPCPVEVM 313
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K+ + A++ YGMTETS ++ T D +LE +
Sbjct: 314 KQVIDRMGMAEVSICYGMTETSP-VSMQTRADDSLER-------------------RVST 353
Query: 365 VGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VG+ PH+E+K+ + G TRG VML YW Q W+ TG
Sbjct: 354 VGRVGPHLEVKIIDPATGLTVPRGTPGEFCTRGYSVMLGYWQQADTTAEAIDAARWMHTG 413
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ +D G V + GR + GGEN+YP E+E L HP I+ V+G+ + R E +
Sbjct: 414 DLAVMDADGYVSITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDQRYGEEL 473
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
+A +R+RE + L+ E LR+ C K L +K PR +V FP+
Sbjct: 474 MAWIRMREGAK---------------ALTVEALREFCTGK-LAHYKIPR-YVHVVDEFPM 516
Query: 539 TSTGKIRRDEVRR 551
T TGKIR+ E+R+
Sbjct: 517 TVTGKIRKVEMRQ 529
>gi|229155539|ref|ZP_04283647.1| Feruloyl-CoA synthetase [Bacillus cereus ATCC 4342]
gi|228627857|gb|EEK84576.1| Feruloyl-CoA synthetase [Bacillus cereus ATCC 4342]
Length = 496
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 244/556 (43%), Gaps = 73/556 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLE-IGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ + ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITDEEEMTYKQLHEYVNKVAAYLIYGLHVQKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTLLFVEETFQNMALSMQKVSYV 123
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+ +++ LK R + + IIC+TSGTTG PK
Sbjct: 124 ------------------QSVISIKSLKEIEDRKIDNFEEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQDNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E +AL +E+H VT ++ VP I L + SV+ NGG P ELM+E
Sbjct: 226 EPTTALSMIEKHKVTVVMGVPTIHQALVNCENFETA--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
N + L +GMTETS ++ ++ D + +
Sbjct: 284 FIN---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + + + + VG +L RG +VM YW++ A K ++ G WL TGD
Sbjct: 320 GKPVLFCDYVLIDENKNKVEIGEVGELLIRGPNVMKEYWNRPDATKETIQDG--WLYTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG
Sbjct: 378 LARVDEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG----------- 426
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
R+ +W E+ K +L+ + + +HCR L +K P+ +++ K P
Sbjct: 427 -----RQHVKWGETPIAFIVKKSNSVLTEKEVIEHCR-LFLAKYKIPKE-IIFLKELPKN 479
Query: 540 STGKIRRDEVRREVMS 555
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLANQLKS 495
>gi|226364601|ref|YP_002782383.1| acid--CoA ligase [Rhodococcus opacus B4]
gi|226243090|dbj|BAH53438.1| putative acid--CoA ligase [Rhodococcus opacus B4]
Length = 512
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 235/554 (42%), Gaps = 70/554 (12%)
Query: 15 RIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
RI +N + G + T ++ LA GL +G+ GD V N LE +
Sbjct: 13 RITMTPKNEALVFDG-QAVTYEEMALRTRRLAHGLRALGVEKGDCVGFFGFNDPAALEVM 71
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVS 134
A +G PLN R + +EA + R +V + EL + P W
Sbjct: 72 FAAGLLGATYLPLNARLTAEEARYVLGDSRCTTVVFGDQQSDVAQELALSESPVTTW--- 128
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV----------IICFTSGTTG 184
+G S S +S + + P+ + ++ ++SGTTG
Sbjct: 129 IGLSDS----------------WSAHTYEGVRAGQPDTRIDERVGLDDLSVLMYSSGTTG 172
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVFI 243
+PKGV++SH ++ ++ ++ + L APL HIGG+ A+ L+ G V +
Sbjct: 173 APKGVMLSHGNMLWNAMNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPTLLCGGTVVLL 232
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
KF++ + L+ +E+ +T+ VP ++ +L R T S++ I G LP L
Sbjct: 233 RKFDAGAVLDTIEKERITTFFAVPTMIQELWHHPRFADT--DLSSLRAICVAGAPLPEAL 290
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ + AYG+TET+ S+T ++ D + + F T V +P G
Sbjct: 291 ISPWQER--GVAIAQAYGLTETAPSVTMLSGDDVRAKVGSAGKRTF--FTDVDVVRPDG- 345
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
S + +G I+ +G +VML Y +Q A + WL TGD G
Sbjct: 346 -------------SSAEPNEIGEIVAQGPNVMLGYLNQPEATDRAIV-DGWLHTGDAGYF 391
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 392 DDEGFLFICDRYKDMYISGGENVYPAEVEAALLKLNGIREAAVIGVPHEK---------- 441
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
W E+ L + +R REK L GFK P F+ + P T+TGK
Sbjct: 442 ------WGETGMAFVVAADGTDLDEDTVRARLREK-LAGFKIP-TFIQIAEGLPRTATGK 493
Query: 544 IRRDEVRREVMSHL 557
IR+ ++R +L
Sbjct: 494 IRKPDLRSRAREYL 507
>gi|86159431|ref|YP_466216.1| AMP-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775942|gb|ABC82779.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 546
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 152/562 (27%), Positives = 240/562 (42%), Gaps = 85/562 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R ++V++ T +QF ++ +ARGLL G++ GD V I A N ++ W A A I
Sbjct: 34 REALVSVYQGYRATYRQFWEETSLVARGLLVRGVKKGDRVGIWAPNRYEWVIWQYATARI 93
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYL---------ELQHTAIPS 128
G ++ +N + E A+ ML T ++D + EL+HT +
Sbjct: 94 GAVMVTVNPAYRVHELEYALKQSGVSMLALSRTFRNADYVAMVREVRLRCPELRHTLVID 153
Query: 129 LRW----HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
W H +L S + R L F + + I +TSGTTG
Sbjct: 154 DEWSALKHDALRLSEQELTRLE-------------RDLQF------DEPINIQYTSGTTG 194
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKG +SH L+ +GY E D P H G+ + IP
Sbjct: 195 FPKGATLSHHNLLNNGFFIGEYLGYREADRVCLPVPFYHCFGMVIGNLAATSHGSAIVIP 254
Query: 245 --KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
F+ + + V+Q TSL VP + +A L + S++ + G P E
Sbjct: 255 LDNFDPVTVMRTVQQERCTSLYGVPTMF--IAELDHPEFHTFDFSSLRTGVMAGSPCPIE 312
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+MK ++ YGMTETS T DP + +
Sbjct: 313 VMKRVQKDMHMPEVTICYGMTETSPVSTQSRTDDPI--------------------EKRV 352
Query: 363 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWL 415
VG+ PHVE+K+ + V G + TRG VML YW D + ++ G W+
Sbjct: 353 TTVGQVHPHVEIKIVDPTTGRVMPRGTPGELCTRGYSVMLGYWNDPHATRGAIDDGR-WM 411
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ +ID+ G V +VGR + GGEN++P EVE L PG+ + V+G+ + +
Sbjct: 412 HTGDLATIDEHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQVIGVPDVKYG 471
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E ++A V+LR + L+ E +R +C+ K T +K PR + +
Sbjct: 472 EELMAWVKLRPG----------------VSLTGEEIRAYCKGKIAT-YKIPRYY-KFVDG 513
Query: 536 FPLTSTGKIRRDEVRREVMSHL 557
FP+T +GK+++ ++R + L
Sbjct: 514 FPMTVSGKVQKYKMRETAIQEL 535
>gi|405976077|gb|EKC40598.1| Acyl-CoA synthetase family member 2, mitochondrial [Crassostrea
gigas]
Length = 606
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 150/577 (25%), Positives = 259/577 (44%), Gaps = 80/577 (13%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
H+ Q + K V T +G+R + + + LA GLL +G++ GD V + N
Sbjct: 64 GHLLQQQAETQPDKTAVVFTASGDRLSFSE-LLDKADQLAAGLLSLGVKKGDRVGVWGPN 122
Query: 67 SEWYLEWILA---VAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLEL- 121
+ +EW++A A G I +N ++ +E + + V++ +E Y E+
Sbjct: 123 T---IEWVIAQYATARAGIIQVNINPQYRPEEVEFTLNKVGCKVLIAAEEFKGQNYYEML 179
Query: 122 ---------------QHTAIPSLRWHVSLGSSSS-DFVNKRDMLTADILKGYS-LRSLPF 164
Q +P L+ + +G+ S +N D++ A K + +++L
Sbjct: 180 FHLVPELANTKSAHIQSHLLPELKHIIMMGNKSHMGTINFNDIMKAGTTKDRTEIQNL-- 237
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCH 223
+ + + I FTSGTTG+PKGV +SH ++ S + Y ++ + PL H
Sbjct: 238 QNRLQFDEPINIQFTSGTTGNPKGVTLSHHNIVNNSYFVAQRLNYHTNETTICIPVPLYH 297
Query: 224 IGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 281
G+ ++ + GA V+ F++ L+A Q TS+ VP + D+
Sbjct: 298 CFGMVLGSLCTVTAGATCVYPSSTFDAGKTLKAAAQERCTSMYGVPTMFIDMLN----HH 353
Query: 282 TWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 339
+ D S+ + G P E +K+ + ++ YG+TETS P
Sbjct: 354 DFDSFDLSSLYTGVMAGSPCPIETLKQVISRMNMDRVTVCYGLTETS----------PVT 403
Query: 340 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHV 394
Q+F P + + VGKP HVE KV ++ G + TRG +
Sbjct: 404 H------QSF----PTDPAEKRVATVGKPHSHVECKVIAENGEICPIGTPGELCTRGYNT 453
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
ML YWD+ + + W TGDI +D+ G +VGR I GGENVYP E+E +
Sbjct: 454 MLYYWDEPTKTKEAISLDRWYHTGDIAQMDEDGFCKIVGRIKDMIIRGGENVYPTEIEQL 513
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
+ +HP + + VVG+ + RL E + A ++++E+ SE ++ +
Sbjct: 514 IYKHPKVKDVQVVGVPDERLGEEICAWIQVKENQSISEDE----------------IKSY 557
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
C+EK L +K P+ ++ FPLT TGK+++ +++
Sbjct: 558 CKEK-LARYKVPK-YISIVTEFPLTVTGKVQKYKIQE 592
>gi|427783845|gb|JAA57374.1| Putative acyl-coa synthetase family member 2 [Rhipicephalus
pulchellus]
Length = 594
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 249/546 (45%), Gaps = 68/546 (12%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNY 89
N+ T + DV + +GLL G GD +AI + NS ++ A+A IG + A ++
Sbjct: 85 NQQITFANYKADVDRVCKGLLSAGFTKGDTIAIWSPNSYNWVVLYGAMAKIGILSACVHP 144
Query: 90 RWSFKEASRAITSIRPVMLVTDESSDSW-YLELQHTAIPSLRWHVSLGSSSSDFVNKRDM 148
++ E + +T + + ES Y E+ + IP L+ +S + + +
Sbjct: 145 AYTAAEFEKVLTKVHFAGIYIPESFKVLKYYEMLCSLIPELKESSPGQLNSKKYPFLKGI 204
Query: 149 LTA------------DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ DI++G ++ + + + I FTSGTTG+PK ++SH
Sbjct: 205 IVESDKALPGCINWQDIVQGGNVNLAEAENKVGMDDPITIVFTSGTTGTPKAAMLSHHGF 264
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFIP--KFESKSALE 253
+ S+ E + P H+ G++ M + ++ G C V +P +++K L+
Sbjct: 265 VNNSIMYDHGAPDPERSILCSPLPFFHVFGMTITMGLTVIRGNCAV-VPCAGYDTKEILK 323
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSF 311
++ + + + P ++AD+ +K D S+ +++ GG + E+ K A F
Sbjct: 324 SIHNYRCSQVAGAPTMIADMIN----HPDFKSFDLSSLNRVVMGGNVVTPEMRKLAKEKF 379
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
KA + YG TET+++ T +T DP Q VG+P +
Sbjct: 380 -KAHVWVGYGATETTTASTLVTERDP--------------------ESKQATTVGRPVGY 418
Query: 372 VELKVCSDGS------SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
VE+KV + + G + RG +V + Y++ V W TGD+G +D+
Sbjct: 419 VEVKVADPATGKETAINEPGEVWVRGHNVFIGYYNDEEKTKEVKGPAGWYKTGDLGKMDE 478
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + ++GR + GGEN+YP E+E VL HP I V+G+ ++R+ E + A V L
Sbjct: 479 DGYLSIIGRLKDMVIRGGENIYPLEIEEVLETHPAIQECHVIGVPDSRMGEELCAWVLLN 538
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ ++S L+Q+C+ K L+ FK P+ F L+ +P T+ GK +
Sbjct: 539 PGSKVTDSE----------------LQQYCKGK-LSHFKIPKYF-LYETDYPKTAIGKAQ 580
Query: 546 RDEVRR 551
++++R
Sbjct: 581 KNKMRE 586
>gi|145221309|ref|YP_001131987.1| long-chain-fatty-acid--CoA ligase [Mycobacterium gilvum PYR-GCK]
gi|145213795|gb|ABP43199.1| AMP-dependent synthetase and ligase [Mycobacterium gilvum PYR-GCK]
Length = 579
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 250/551 (45%), Gaps = 62/551 (11%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
LSR A ++ ++V R T + + V LA L E G+ GD V I LN ++E
Sbjct: 51 LSRHALMQPDTVALRFLGRSTTWGELDRRVTALAGALHERGVGFGDRVLILMLNRTEFME 110
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI----PS 128
+LAV +GGI P+N+R + E + ++ +++T+ LE TA+ P
Sbjct: 111 SVLAVNKLGGIAVPVNFRMTPSEIAFLVSDCAAEVVITES-----VLENVATAVRDIDPK 165
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
L + G +S D V D + A L +P + +I +TSGTTG PKG
Sbjct: 166 LATVIVAGGTSRDNVLDYDDVLASTTAAPPLVDIP------DDSPALIMYTSGTTGRPKG 219
Query: 189 VVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--K 245
V++H+ L Q++ + G D+ P HI G+ S ++ +M+G V P
Sbjct: 220 AVLTHNNLAGQAMTLLFTNGADINHDIGFIGVPFFHIAGVGSIVSGMMLGRPTVIYPLGA 279
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LM 304
F+ L+ +E VT + VPA + + R+ + L+ G S+ L+
Sbjct: 280 FDPNELLDVLEAEKVTGIFLVPAQWQAVCAAQKANP----RNLKLRFLSWGAAPASDTLL 335
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
++ + +FP A++++A+G TE S +T M L D L G
Sbjct: 336 RQMSETFPGAQILAAFGQTEMSP-VTCMLLGDDALRKLGS-------------------- 374
Query: 365 VGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
VGK P V ++ + + VG I+ R +M YW+ A G W +GD
Sbjct: 375 VGKVIPTVSARIVDEDMNDVPIGQVGEIVYRAPTLMTGYWNNPTATAEAFAGG-WFHSGD 433
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ D+ G +W+V R+ I SGGEN+Y EVE VL HP I+ + V+G ++ + E+ V
Sbjct: 434 LVRQDEEGYIWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRSHRKWGEVPV 493
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A LR S S+ + L L+ L Q ++ L +K P+ + + P
Sbjct: 494 AVAVLRSSL--------NSTGSGRLELTD--LEQFLGDR-LARYKHPKAIEIV-EALPRN 541
Query: 540 STGKIRRDEVR 550
GK+ + E+R
Sbjct: 542 PAGKVLKTELR 552
>gi|161523288|ref|YP_001578300.1| AMP-binding domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189351939|ref|YP_001947567.1| AMP-binding domain protein [Burkholderia multivorans ATCC 17616]
gi|160340717|gb|ABX13803.1| AMP-dependent synthetase and ligase [Burkholderia multivorans ATCC
17616]
gi|189335961|dbj|BAG45031.1| long-chain fatty-acid-CoA ligase [Burkholderia multivorans ATCC
17616]
Length = 575
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 158/561 (28%), Positives = 249/561 (44%), Gaps = 88/561 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA GL +G+R GD V I + N SEW L A A IG I+ +N +
Sbjct: 60 TWREFAAEIDVLAAGLAALGIRKGDRVGIWSPNRSEWLLTQ-FATARIGAILVNINPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ E S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCTAVIAAERFKSSAYVEMLQTIAPELANAAPGELRAARVPSLRTVVSM 178
Query: 136 GSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
G + +D + R T D +L +L T A + I FTSGTTGSPKG
Sbjct: 179 GDVAPPGMFRFADVI-ARGRATVD---SAALDALGAT--LAATDPINIQFTSGTTGSPKG 232
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-F 246
++H ++ + + + E D PL H G+ A +A + GA VF + F
Sbjct: 233 ATLTHRNVVNNARFIARAMRFSEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAF 292
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L AV + T+L VP + +A L + +++ + G P E MK
Sbjct: 293 DPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMKR 350
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ +++ AYGMTETS P +F + T + + + + VG
Sbjct: 351 VVSQMHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVG 390
Query: 367 KPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDT 417
+ PH+E+K+ V G + T+G VML YWD T EV W+ T
Sbjct: 391 RVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD-----DAKTREVLIDGWMHT 445
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ ++D G +VGR + GGENVYP E+E L +HP I V G+ + + E
Sbjct: 446 GDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEE 505
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+ A + LR Q +E + +R C + + +K PR ++ + P
Sbjct: 506 LCAWIVLRADEQMTEDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELP 547
Query: 538 LTSTGKIRRDEVRREVMSHLK 558
+T TGK+++ +R ++ LK
Sbjct: 548 MTVTGKVQKFVMRERMIDELK 568
>gi|410452975|ref|ZP_11306937.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409933720|gb|EKN70640.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 516
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 253/563 (44%), Gaps = 65/563 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+ + L + A + + I + T +Q+ V ++A ++ IGL+ GD +A S
Sbjct: 5 NFFETLKKQAEERPDQSAFIFMDESITWKQYHDTVNSVANSIIRIGLKPGDSIATILPQS 64
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
++ +A A +G ++ PL+ R + E I+P +L+T ++ E +
Sbjct: 65 PAFMYVYMAAAKLGLVIVPLDPRLNALEMIALCKRIKPKLLITIATT-----ERIKENVN 119
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS---WAP--EGAVIICFTSGT 182
+L V + S F D++ L SL H+ + P + ++I FTSG+
Sbjct: 120 TLLKEVDINHVYSYF---GDLIIECALPFESLIEFSSDHASYLYEPSLDDPLLIIFTSGS 176
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYG--EDDVYLHTAPLCHIGGLSSAMAM-LMVGAC 239
TG PKG VI+H + S+ K I +G D L P H+GGL++++ + L+ GA
Sbjct: 177 TGKPKGAVITHKNIF--SICKTTIHSWGITNQDRMLINLPNSHVGGLTNSIGVQLLAGAS 234
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
V +P F + L ++++ +T VP + + V+ S++ + G
Sbjct: 235 AVLVPAFNPEETLHLIQKYKITVTGGVPTMYRIMFRSCSVRNF--DVSSIRVLRVSGEPS 292
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
+EL+ E +F + +++GMTETS TF P N+ N+V
Sbjct: 293 SAELINEIKRNFVNVTIATSWGMTETSGFFTFTK------------PNDDINIVANTV-- 338
Query: 360 PQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
G P ++K+ ++ +G IL +G V+ Y ++ K S G W
Sbjct: 339 ------GAPGDGYQMKILKTNDTWAQTAEIGEILVKGDSVISGYLNEEDNKNSFYNG--W 390
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L TGD+G +D+ + GR SGG NVYP E+E+ L ++PG+ V++ I +
Sbjct: 391 LKTGDLGYLDENNYLHFAGRLKEMYISGGYNVYPLEIESFLNKYPGVSASVIIAIPDE-- 448
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
W E C + L E L+++C+ K L +K P+ F++ R
Sbjct: 449 --------------IWGEVGCAFIIPHDNTNLDIESLKEYCK-KGLADYKQPKKFIIERN 493
Query: 535 PFPLTSTGKIRRDEVRREVMSHL 557
P T+ GKI + E++R + ++
Sbjct: 494 -LPKTAIGKIAKQEIKRYLEKYI 515
>gi|89098400|ref|ZP_01171284.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
gi|89086949|gb|EAR66066.1| acyl-CoA synthase [Bacillus sp. NRRL B-14911]
Length = 519
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 243/544 (44%), Gaps = 48/544 (8%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ +V + NR T ++ + +A L G+ GD V++ N+E A A I
Sbjct: 19 KEAVYDVRKNRRYTYSEWNLRINRVAHALAAEGVSKGDRVSVFLYNTEELAAVFFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLG--SS 138
G + P+N+R +EA+ + P +L+ +E+ + L+ + W++ S
Sbjct: 79 GAVFNPINFRLQAEEAAYILRDASPKVLIYEEALEPVVSALEGQFPATAFWYIDEEPPSY 138
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
++ F K + P + + I +TSGTTG PKGV+ +H +
Sbjct: 139 AASFDEKVSQASDS----------PVFADVSEDDDYAIMYTSGTTGRPKGVIHTHRHMAE 188
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQ 257
QSL IA D L TAP+ H L A + + VGA ++ + +F K L+ +E+
Sbjct: 189 QSLTVIAATKLEPSDKGLVTAPMFHCAELHCAFLPRVHVGAGNIILHQFNPKKVLQLIEE 248
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
+T P + +++ DS+K L G + L+K L+
Sbjct: 249 EGITKFFAAPTMWN---MILQEDLMAYCLDSLKLGLYGAAPMAPALVKLCREKL-GILLV 304
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
AYGMTE ++TF++ +D L G QA N H+ + V P +
Sbjct: 305 QAYGMTEMGPAITFLSEHD-QLSKAGSAGQACLN------HEIRIVRPNDNGPSNPEDIL 357
Query: 378 SDGSSHVGRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
G + G I+ +G +M Y++ + + ++ G W +GDIG++D+ G +W+ R +
Sbjct: 358 PAGEA--GEIIVKGPSMMKGYYNMKETTEKALYKG--WYHSGDIGALDEDGYLWVRDRVD 413
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
I SGGEN+YP E+E VL +H G++ V+G + R E V A V
Sbjct: 414 DMIISGGENIYPREIEDVLFEHSGVLDAAVIGQPDDRWGETVTAFV-------------- 459
Query: 497 QSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
K+ +S E L C+E + L +K PR ++ P ++GK+++ +R E+
Sbjct: 460 ---VKKDPSVSEEELDSWCKESSRLANYKRPRKYIFCES-LPRNASGKLQKFVLRSELSQ 515
Query: 556 HLKS 559
+S
Sbjct: 516 SAQS 519
>gi|386358405|ref|YP_006056651.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365808913|gb|AEW97129.1| acyl-CoA synthetase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 570
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 166/575 (28%), Positives = 244/575 (42%), Gaps = 75/575 (13%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R A R ++V R + F +V LAR LL G+ GD V I A+N
Sbjct: 46 IGRNLDRAVAAWPDRPALVDAATGRRWSYAGFAAEVDRLARALLAYGVTKGDRVGIWAVN 105
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH 123
EW+ A A IG ++ +N + E + +L+ + S
Sbjct: 106 CP---EWVFTQYATARIGAVLVNVNPAYRTHELGYVLRQSGVSLLIASTAYKSSDYVAMA 162
Query: 124 TAI----PSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
A+ P LR V +G++ + + + + AD R+ + V I +
Sbjct: 163 AAVREECPGLRHTVHIGTAGWRELLAAGETVPAD-------RTAAAQAALDCREPVNIQY 215
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVG 237
TSGTTG PKG +SH ++ ++GY E D P H G+ +A G
Sbjct: 216 TSGTTGFPKGATLSHRNILNNGYFVGELLGYTEADRVCLPVPFYHCFGMVMGNLAATSHG 275
Query: 238 ACHVF-IPKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKIL 293
AC V P F+ + L AV T+L VP + +A+L + G D S++ +
Sbjct: 276 ACVVIPAPVFDPAATLRAVRDEGCTALYGVPTMFIAELGL-----PDFAGYDLSSLRTGI 330
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+MK A++ YGMTETS ++ T D LE
Sbjct: 331 MAGSPCPVEVMKRVVGEMHMAEVAICYGMTETSP-VSTQTRRDDDLER------------ 377
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PH+E++V + G + TRG VML YW+
Sbjct: 378 -------RTATVGRVLPHLEVRVADPVTGETVPRGVPGELRTRGYSVMLGYWEDPERTAE 430
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
V G+ W+ TGD+ + + G + + GR I GGENVYP E+E L HP I + VV
Sbjct: 431 VIDGDGWMHTGDLAVMREDGYLTITGRIKDMIIRGGENVYPREIEEFLHTHPKIADVQVV 490
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + R E V+ACV R+ + E + HCR + L FK PR
Sbjct: 491 GVPDERYGEEVLACVIPRDPADPP---------------TLEEVTAHCRGR-LAHFKIPR 534
Query: 528 LFVLW-RKPFPLTSTGKIRRDEVRREVMSHLKSLP 561
L LW FP+T +GK+R+ E+R S P
Sbjct: 535 L--LWVLDSFPMTVSGKVRKVELRERFAGPDHSGP 567
>gi|299067998|emb|CBJ39212.1| long-chain-fatty-acid-CoA ligase [Ralstonia solanacearum CMR15]
Length = 571
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 153/555 (27%), Positives = 258/555 (46%), Gaps = 77/555 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T + F + V LA GL +GL+ G+ + I + N EW+L A A +G I+ +N
Sbjct: 57 TWRAFAEQVDALAAGLHALGLQRGERIGIWSPNR---YEWVLTQFATARLGLILVNINPA 113
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHV 133
+ E A+ + +V E+ S YLE LQ +P+LRW +
Sbjct: 114 YRLTELEYALNKVGCKAIVAAEAFKTSRYLEMLQTLAPELATAQPGALQAAKLPALRWVI 173
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+G ++ + + D + A +G +L + +P+ A+ I FTSGTTG+PKG ++
Sbjct: 174 RMGEGATPGMIRFDEVMAR-GQGVPAGTLDAIAAALSPDDAINIQFTSGTTGAPKGATLT 232
Query: 193 HSALIVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVFIPK-FESK 249
H ++ + +A+ G D + + PL H G+ S +A GAC VF + F+
Sbjct: 233 HVNIVNNARFVAMAMNLQGTDRLCV-PVPLYHCFGMVMSVLACAATGACMVFPGEAFDPL 291
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L V + T+L VP + +A L + S++ + G P E+MK
Sbjct: 292 ATLRTVAEERCTALHGVPTMF--IAQLDHPEFRSFDVSSLRGGIMAGSPCPIEVMKRVLA 349
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ AYGMTETS P +F + + + + + VG+
Sbjct: 350 EMHLREVTIAYGMTETS-------------------PVSFQSAVTDPLDK-RVTTVGRVQ 389
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+++K+ DG+ V G + T+G VML YWD AK + S + W+ TGD+ +
Sbjct: 390 PHLQVKLV-DGAGEVVPVGEKGELCTKGYSVMLGYWDD-EAKTAESILDGWMRTGDLATF 447
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G +VGR + GGENVYP E+E L +HP + + V G+ + + E V A +
Sbjct: 448 DADGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVNVFGVPDPKYGEEVCAWIV 507
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+ Q ++ E +R+ C + + +K PR ++ + P+T TGK
Sbjct: 508 LKPGQQATQ----------------EEIREFC-QGQIAHYKIPR-YIRFVTEMPMTVTGK 549
Query: 544 IRRDEVRREVMSHLK 558
+++ +R ++ L+
Sbjct: 550 VQKFVMRERMIEELR 564
>gi|254721282|ref|ZP_05183072.1| acyl-CoA synthetase [Bacillus anthracis str. A1055]
Length = 496
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 251/557 (45%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ E+ ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ A+A + I PLN R + E + +L +++ + L +Q +
Sbjct: 64 LEYIVLFFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIDNFAEKNESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K P
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLVNQLKSR 496
>gi|440695433|ref|ZP_20877973.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
gi|440282491|gb|ELP69938.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
Length = 527
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 257/559 (45%), Gaps = 79/559 (14%)
Query: 17 AAVKR--NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
AA +R + + + G+R + +Q Q + R + +G+ +GD V + A NS EWI
Sbjct: 16 AAAERFGDDIALVDGDRRWSFRQLAQRMTEAVRAAVALGVEAGDRVGLCAPNSA---EWI 72
Query: 75 LAVAFI---GGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTA-IPS 128
A I GG+V PLN R+ E S + + + V SD L+H +P+
Sbjct: 73 FAALGIQGAGGVVVPLNTRFKAGEISYILRKSGAKAVFAAPFLGSDYIADLLKHDPDLPA 132
Query: 129 LRWHVSL----GSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
LR VS+ G++ ++F+ + ++A + R P+ + FTSG
Sbjct: 133 LRRTVSVLGPKGAADLSWTEFLRAAETVSAATAEETMGR-------LTPDDISDVMFTSG 185
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVG----YGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
TTG PKGV+++H QSL + + D +L P H G + +A M
Sbjct: 186 TTGRPKGVILTHG----QSLRAYGWMAEEYTFRRGDSFLVIPPFFHCFGYKAGWLASFMH 241
Query: 237 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
G V +P F+ ALE +E+ V+ L+ P I DL + ++ S++ + GG
Sbjct: 242 GVTVVPMPVFQPGKALEIIERERVSVLLGPPTIFHDL--INHPDRSGHDLSSLRVSMTGG 299
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
+P L++ + ++SAYG+TE+S+ +T + D + ET +
Sbjct: 300 TTIPQALIRAMKSELSFDIVMSAYGLTESSALVTTTRIGD-SEETVAR------------ 346
Query: 357 VHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTG 411
G+ P VE+++ + V G IL RG +V YW++ A +
Sbjct: 347 -------TTGRVIPDVEVRIVDEEGREVAAEQDGEILVRGYNVTRGYWEEPEATAATIDA 399
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
+ WL TGDIG +D GN+ +V R+ GG N YP E+E +LL H I + V+G+ +
Sbjct: 400 QGWLHTGDIGRLDAAGNLSIVDRKKEMYIVGGFNAYPAEIEKLLLAHESIGQVAVIGVPD 459
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
RL E+ A V R+ + SE KE++ E R+H + FK PR L
Sbjct: 460 ERLGEVGCAFVVPRQGHEVSE---------KEVV---EWSREH-----MANFKVPRHVRL 502
Query: 532 WRKPFPLTSTGKIRRDEVR 550
+ P ++ K+ +DE+R
Sbjct: 503 VGQ-LPRNASQKVLKDELR 520
>gi|156740435|ref|YP_001430564.1| AMP-dependent synthetase/ligase [Roseiflexus castenholzii DSM
13941]
gi|156231763|gb|ABU56546.1| AMP-dependent synthetase and ligase [Roseiflexus castenholzii DSM
13941]
Length = 515
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 229/515 (44%), Gaps = 62/515 (12%)
Query: 51 EIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT 110
G++ GD VA+ A+N YL+ A +G I+ LN+R + E + I P +L+
Sbjct: 49 RFGVQPGDRVAVLAMNCVAYLDIWFACGKLGAILQNLNWRLTPTELAGLIADAEPALLIY 108
Query: 111 DESSDSWYLELQHTAI--PSLRWHVSLGSSSSDFV-NKRDMLTADILKGYSLRSLPFTHS 167
L+ I P + + D V +RD L+ L +
Sbjct: 109 GPDFVEQVRALRSAGIVTPGIALDADCRADPGDPVFAERDAYPDTPLQAVDLTA---DTP 165
Query: 168 WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 227
W IIC+T GTTG PKG +++H + + +A G DDV + APL H GGL
Sbjct: 166 W------IICYTGGTTGLPKGAILTHGNVFFNVVNTVAGWGLRPDDVTILNAPLFHTGGL 219
Query: 228 SSAMAMLM-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+ A L +G + +F+ + +EQ VT VP + L R W+
Sbjct: 220 NVFTAPLAHIGGMSIVCRQFDPDQVFDLIEQQGVTIYFGVPTMFLALQRHPR----WETA 275
Query: 287 D--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 344
D V+ +++GG P + + T + YG+TE + ++
Sbjct: 276 DFSRVRWMISGGAPCPPPVFE--TFRRRGVPFRTGYGLTEAGPNTFWL------------ 321
Query: 345 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYW 399
P+ + + VG P PH++L++ ++ VG + RGAHV YW
Sbjct: 322 ---------PDDDIEHKAGSVGYPLPHIDLRLVNERGEPCAPGEVGELQIRGAHVCAGYW 372
Query: 400 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 459
+ A+ + + + WL TGD+ D+ G +VGR I SGGEN+YP EVEAV+ HP
Sbjct: 373 RR-PAETAATIVDGWLRTGDLARRDEEGCYTIVGRLKDVIISGGENIYPAEVEAVIAGHP 431
Query: 460 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 519
++ + ++G +A E+ A V L E +S+ + + ++L +CR++
Sbjct: 432 AVLEVALIGAPDATWGEVGWAVVVLHE-----------ASRQQITDIERQIL-DYCRDR- 478
Query: 520 LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVM 554
L +K P+ ++ P T GKI + +RRE +
Sbjct: 479 LARYKIPKRVIV-VDALPRTGAGKIDKRALRREFV 512
>gi|94314059|ref|YP_587268.1| long-chain-fatty-acid--CoA ligase [Cupriavidus metallidurans CH34]
gi|93357911|gb|ABF11999.1| putative AMP-dependent synthetase and ligase / putative
o-succinylbenzoate-CoA ligase [Cupriavidus metallidurans
CH34]
Length = 525
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 142/558 (25%), Positives = 239/558 (42%), Gaps = 65/558 (11%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A + + A + ++ R T F + +A+ LL G+++GD +A N
Sbjct: 7 ATLPSAIRHFARERAGAIAYAFEGRETTFADFDRHTDRVAQALLADGVKAGDRIAYVGKN 66
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
S+ Y E A +G ++AP+++R + E ++ ++ S + L A+
Sbjct: 67 SDHYFELFFGAAKMGAVIAPVSWRLAGPEIQYIVSHCDATLVFVGPESSASVRNLL-PAL 125
Query: 127 PSLRWHVSLGSSSSD---FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P +R V++ D + RD + P H P V+ +TSGTT
Sbjct: 126 PLVRRAVAMEGGEPDWPAYTEWRD----------ACPDTPPAHEAKPADVVLQLYTSGTT 175
Query: 184 GSPKGVVISHSALIVQSLAKIAI------VGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 237
G PKGV++ H L S +I++ + ++DV L P+ HIGG + ++VG
Sbjct: 176 GRPKGVMLMHRNLT--SGTEISMREGADWSQWNDEDVSLVAMPVAHIGGSGWGVRGVLVG 233
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
V +F+ L+ +E ++ L VPA M + R ++ R +K +L G
Sbjct: 234 CKGVVAREFDPGKVLDYIEHDRISKLFMVPAAMQIVLRDPRARQVDYSR--LKHMLYGSS 291
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P+ L++E F + YGMTET+ ++ + P TP +P+
Sbjct: 292 PIPAALLREGMAVF-GCGFVQQYGMTETTGTIVALP---PEDHTPADVPRMR-------- 339
Query: 358 HQPQGVCVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
GK P E+ V DG + VG ++ R M YW Q +
Sbjct: 340 ------AAGKAMPGSEVAVVGPDGQRLAAGEVGEVVIRSPQNMAGYWKQEEETARTIDAD 393
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WL +GD G +D G +++ R I SGGEN+YP EVE+ + HP + + V+G+ +
Sbjct: 394 GWLRSGDAGYMDADGYLYIHDRVKDMIISGGENIYPAEVESAIYGHPAVADVAVIGVPDE 453
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
R E V A V LR + ++ + RE+ + GFK P+ + +
Sbjct: 454 RWGEAVKAMVVLRPG----------------VAADADSILGWARER-IAGFKVPK-SIDF 495
Query: 533 RKPFPLTSTGKIRRDEVR 550
P +GK+ R +R
Sbjct: 496 IDAMPRNPSGKLLRRALR 513
>gi|212639346|ref|YP_002315866.1| long-chain-fatty-acid--CoA ligase [Anoxybacillus flavithermus WK1]
gi|212560826|gb|ACJ33881.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Anoxybacillus
flavithermus WK1]
Length = 519
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 253/543 (46%), Gaps = 44/543 (8%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
K+ ++V + T +Q+ ++V LA L+ G+R GD V+ N+ A A
Sbjct: 18 KKEALVDVRTGLRYTYKQWAKEVDKLANAFLKAGVRKGDRVSTVLFNTAELATAFFACAK 77
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
IG + P+N+R KE + +T P +++ +++ + + H P + + + G
Sbjct: 78 IGAVFNPINFRLRPKEIAYILTDATPKIVLFEQAVEPQITAIHHE-FPHISFWIIDGQVP 136
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ 199
+ + + + + LP T + I +TSGTTG PKGV+ H +I Q
Sbjct: 137 TYAASYHEQIQC------ASNELP-TIDVSENDLYAIMYTSGTTGRPKGVMHRHRDMIEQ 189
Query: 200 SLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQH 258
SL +++ E + L TAP+ H L + + GA +V + F+ K L +EQ
Sbjct: 190 SLICNSVMRIRETERGLVTAPMFHCAELHCCFLPRVHAGATNVIVHHFDPKQVLTVIEQE 249
Query: 259 CVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLIS 318
+T L P + L++ K + S++ L G + L+KE LI
Sbjct: 250 QITVLFAAPTMWN---MLLQEKLSDYDLSSLRIGLYGAAPMAPVLVKECKERL-GIDLIQ 305
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
AYGMTE ++TF+ + L G +A N H+ + V + P +
Sbjct: 306 AYGMTEMGPAVTFL-YEEEQLTKAGSAGRACLN------HEIRIVKPREDGPSDPDDILP 358
Query: 379 DGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 437
G VG I+ +G +M+ Y+++ A + ++ G W +GD+G +D+ G +++ R +
Sbjct: 359 PG--QVGEIIVKGPCMMVGYYNREDATEKAMYKG--WYHSGDLGYMDEDGYLYVADRVDD 414
Query: 438 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 497
I SGGENVYP EVE VL +H G++ + V+G +A E VVA +
Sbjct: 415 MIISGGENVYPREVEDVLYEHEGVLDVAVLGEPDALWGEKVVAFI--------------- 459
Query: 498 SSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
K+ L++E L C++ + L +K PR + + + P ++GKI++ +R ++
Sbjct: 460 --VKKDQQLTAEQLEAFCKQSDKLAPYKRPRAY-YFVEALPRNASGKIQKFLLREQMKKM 516
Query: 557 LKS 559
+S
Sbjct: 517 AQS 519
>gi|392539101|ref|ZP_10286238.1| AMP-binding domain protein [Pseudoalteromonas marina mano4]
Length = 577
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 149/564 (26%), Positives = 255/564 (45%), Gaps = 70/564 (12%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIG 81
+VV N T ++F ++V LA GLL IG++ GD V I S N +W L A A IG
Sbjct: 53 AVVVNHQNIRLTYKEFQKEVNQLAMGLLAIGVKPGDRVGIWSPNNIQWCLTQ-FATAKIG 111
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I+ +N + E A+ S+ L+T + S Y+E+ ++ P L+ S S+
Sbjct: 112 AIMVCINPAYRPNELQYALNSVECSTLITASQFKGSNYIEMLNSLAPELKHCDSGKLSAK 171
Query: 141 DFVNKRDMLT------------ADILK----GYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
N ++++ +DI++ + L + + + I FTSGTTG
Sbjct: 172 ALPNLKNVIRIGDNVSAGMFSFSDIMRMATPAHELELNAIAANLNADQDINIQFTSGTTG 231
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
+PKG ++H ++ +L + + E D PL H G+ + + P
Sbjct: 232 NPKGATLTHKNILNNALFVGDSMHFTEHDKLCIPVPLYHCFGMVLGSLLCVTKGAAAIYP 291
Query: 245 K--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
F++K+ L+ +EQ T+L VP + L T+ D S++ + G P
Sbjct: 292 SDSFDAKTTLDVIEQEGCTALHGVPTMFISQLEL----STFNEYDLRSLRTGVMAGSTCP 347
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
++M++ +++ AYG TE S + +T D ++E
Sbjct: 348 EQVMRKVQTQMNMHQVLIAYGQTE-CSPINNITETDSSIER------------------- 387
Query: 361 QGVCVGKPAPHVELKVCSD-GSSHV----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
Q VG+ H E+K+ + G+ G + ++G M YW+ + + WL
Sbjct: 388 QVTTVGRALAHTEVKIIDELGNIQKIGLPGEVCSKGVGTMRCYWNDEEKTKATIDSDGWL 447
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD+G +D G V +VGR I GGENVYP E+E VL +PGI V GI++ +
Sbjct: 448 HSGDLGVMDSEGFVSIVGRIKDMIIRGGENVYPREIEEVLYTYPGIQDAAVFGISDEKYG 507
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V A ++ +E + L + +R ++K L FK PR ++ + +
Sbjct: 508 EEVCAWIQPKE----------------DTTLDEQAIRAFLQDK-LAYFKMPR-YIRFVES 549
Query: 536 FPLTSTGKIRRDEVRREVMSHLKS 559
+P+T TGK+++ ++R ++ L S
Sbjct: 550 YPMTVTGKLQKFKMREQMQEVLSS 573
>gi|153010019|ref|YP_001371234.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
gi|151561907|gb|ABS15405.1| AMP-dependent synthetase and ligase [Ochrobactrum anthropi ATCC
49188]
Length = 562
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 158/571 (27%), Positives = 254/571 (44%), Gaps = 82/571 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R +V+ N T + Q LA G L IGLR G+ + I + N+ LEWIL A
Sbjct: 34 RPAVIVRHQNIRLTYSELKQLTDRLAEGFLAIGLRPGERLGIWSPNN---LEWILTQFAS 90
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--------- 127
A G I+ +N + E + + L+ S S Y+++ + +P
Sbjct: 91 AKAGLILVNINPAYRAHELEYVLGKVECAALILAPSLKTSNYIDILRSIVPELDEARPGH 150
Query: 128 -------SLRWHVSLGSSSS-DFVNKRDML-TADILKGYSLRSLPFTHSWAPEGAVIICF 178
+LR + +G+ + +N D+ + D + G L L + + I F
Sbjct: 151 VMSERLPNLRCVIRIGAEQTPGMLNFDDVAQSGDEVTGQELAQL--AEELQFDDPINIQF 208
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVG 237
TSGTTGSPKG +SH ++ + E D P H G+ +A + G
Sbjct: 209 TSGTTGSPKGATLSHHNILNNGFFVGEAMQLSEQDRLCIPVPFYHCFGMVLGNLACVTHG 268
Query: 238 ACHVFIPK--FESKSALEAVEQHCVTSLITVPAI---MADLATLIRVKKTWKGRDSVKKI 292
+C V IP F+ L+ VE+ T L VP + M D R T S++
Sbjct: 269 SCMV-IPNESFDPLLTLQTVEEEQCTGLHGVPTMFIAMLDHPDFSRFNLT-----SLRTG 322
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P E+M+ + ++++ AYGMTETS P +F +
Sbjct: 323 IMAGSPCPIEVMRRVVSEMHQSEITIAYGMTETS-------------------PVSFQSS 363
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPS 407
T + + + + VG+ PH+E+K+ +DG G +LTRG VM YW+ +
Sbjct: 364 TTDPLER-RVSTVGRIHPHLEVKIVDADGKVVPRGEKGELLTRGYSVMRGYWNDAESSAG 422
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
W+ TGD+ +ID+ G +VGR I GGEN+YP E+E L HP I + +
Sbjct: 423 AIDDAGWMHTGDLATIDEEGYCNIVGRIKDLIIRGGENIYPREIEEFLFSHPAISDVQIF 482
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
GI + + E++ A V+L + Q SE E L ++CR++ + +K P
Sbjct: 483 GIPDRKFGEIICAWVKLHKDGQLSE----------------EELAEYCRQR-IAHYKVP- 524
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
+ + FP+T TGKI++ +R+ ++ L+
Sbjct: 525 AHIRFVDQFPMTVTGKIQKFVMRQVMIEELE 555
>gi|386843340|ref|YP_006248398.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374103641|gb|AEY92525.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451796631|gb|AGF66680.1| acyl-CoA synthetase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 530
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 161/547 (29%), Positives = 235/547 (42%), Gaps = 71/547 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T +F DV LAR L G+ GD V I A+N EW+L A
Sbjct: 34 DREALVDVPSGRRWTYAEFGADVEELARALAAGGITKGDRVGIWAVNCP---EWVLVQYA 90
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV---TDESSDSWYLELQ-HTAIPSLRWH 132
A IG I+ +N + EA + +LV + +SD + Q P LR
Sbjct: 91 TARIGAIMVNINPAYRTHEAEYVLRQSGVSLLVASLSHRTSDYRAMAEQVRGNCPELREV 150
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +G S D + +R A P+ + + + I +TSGTTG PKG +S
Sbjct: 151 VYIGDPSWDELLRRATPEA-----------PYAE-LSCDDPINIQYTSGTTGFPKGATLS 198
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKS 250
H ++ + Y E D P H G+ +A GAC V + F+ +
Sbjct: 199 HHNILNNGYFVGESIAYTEQDRICIPVPFYHCFGMVMGNLAATSHGACMVIPARSFDPAA 258
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
LEAV++ TSL VP + +A L S++ + G P E+MK
Sbjct: 259 TLEAVQRERCTSLYGVPTMF--IAELNLPDFASYDLSSLRTGIMAGSPCPVEVMKRVVAE 316
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS ++ T + LE + VG+ P
Sbjct: 317 MHMEQVSICYGMTETSP-VSLQTRIEDDLEH-------------------RTATVGRVLP 356
Query: 371 HVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+KV + G + TRG VML YW++ W+ TGD+ +
Sbjct: 357 HLEVKVVDPATGVTQPRGAAGELCTRGYSVMLGYWNEPEKTAEAIDAGRWMHTGDLAVMR 416
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E V+ACV
Sbjct: 417 EDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIRDVQVVGVPHERYGEEVLACV-- 474
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGK 543
+ L+ E LR C + L +K P RL +L FP+T +GK
Sbjct: 475 -------------IPSDPADPLTLEELRDFCAGR-LAHYKIPSRLQLL--DAFPMTVSGK 518
Query: 544 IRRDEVR 550
+R+ E+R
Sbjct: 519 VRKVELR 525
>gi|312140942|ref|YP_004008278.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311890281|emb|CBH49599.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 550
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 239/552 (43%), Gaps = 72/552 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R++++ R T ++ ++V LA GLL G+ GD V I A N +EW + A A
Sbjct: 40 DRDALIDRGSGRRWTYRELAREVDALATGLLGTGITKGDRVGIWAPNCAEWTMVQ-YATA 98
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP---SLRWHVS 134
IG I+ +N + E + ML+ + S Y + P +L +
Sbjct: 99 KIGAILVNINPAYRSHELEYVLDQAGIRMLIAAPAFKTSDYAAMIEQVRPERAALEHVLL 158
Query: 135 LGSSSSDFV--NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
LGS D + + R L AD + R+ + + + + I +TSGTTG PKG +S
Sbjct: 159 LGSEQWDRLLDDGRAALEAD--RAALDRA---QGALSADDPINIQYTSGTTGFPKGATLS 213
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL--------SSAMAMLMVGACHVFIP 244
H ++ + GY E D P H G+ S AM++ G P
Sbjct: 214 HHNILNNGYFVGELCGYTEHDRVCIPVPFYHCFGMVMGNLACTSHGAAMVIPG------P 267
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
FE + L AV+ TSL VP + +A L S++ + G P E+M
Sbjct: 268 AFEPAATLAAVQAERCTSLYGVPTMF--IAELADPDFDSYDLSSLRTGIMAGSPCPVEVM 325
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K+ A++ YGMTETS P + +S+ Q +
Sbjct: 326 KQVIERMGMAEVSICYGMTETS-------------------PVSLQTRRDDSIDQ-RVST 365
Query: 365 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VG+ PH+E+K+ + G + TRG VML YW+ W+ TG
Sbjct: 366 VGRVGPHLEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNNPEKTSEAIDSARWMHTG 425
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E +
Sbjct: 426 DIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEEL 485
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
+ +R+RE Q L + +R+ C + L +K PR +V FP+
Sbjct: 486 MVWIRMREGAQ---------------PLDVDKVREFCTGR-LAHYKIPR-YVHLVDEFPM 528
Query: 539 TSTGKIRRDEVR 550
T TGKIR+ E+R
Sbjct: 529 TVTGKIRKVEMR 540
>gi|170694322|ref|ZP_02885476.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170140745|gb|EDT08919.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 576
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 158/560 (28%), Positives = 255/560 (45%), Gaps = 86/560 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T ++F +V LA GLL +G+ GD V I + N +EW+L A A IG ++ +N
Sbjct: 61 TWKEFADEVDILAAGLLALGIAKGDRVGIWSPNR---VEWLLTQFATARIGAVLVNINPA 117
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLE-LQHTA---------------IPSLRWHV 133
+ E A+ + +V E S YLE LQ A +P LR+ +
Sbjct: 118 YRLSELEYALNKVGCKAIVAAERFKTSMYLEMLQQLAPELATHAPGDLHAARLPELRYVI 177
Query: 134 SLGS-------SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ S SD + ++ T D+ + ++ H A+ I FTSGTTG+P
Sbjct: 178 RMCDTETPGMLSFSDLI-EQGRATLDVARLDAIGETLSCHE-----AINIQFTSGTTGNP 231
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK 245
KG ++HS ++ + + E D PL H G+ A +A + VGA VF +
Sbjct: 232 KGATLTHSNVVNNARYIAMAMNLSEQDALCIPVPLYHCFGMVLAVLACVSVGANMVFPGE 291
Query: 246 -FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F+ + L AV + T+L VP + +A L ++ + G P E M
Sbjct: 292 AFDPAATLAAVTEEQCTALHGVPTMF--IAELDHPDFASYDLSRLRTGIMAGSPCPIETM 349
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K+ + +++ AYGMTETS P +F + T + + + +
Sbjct: 350 KKVVSRMHLSEITIAYGMTETS-------------------PVSFQSSTTDPLDK-RTTT 389
Query: 365 VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTG 418
VG+ PH+E+K+ + V G + TRG VM YW D+ + S+ G W+ TG
Sbjct: 390 VGRIQPHLEVKIIDPLGNIVPVGETGELCTRGYSVMQGYWGDEEKTRESIVDG--WMHTG 447
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ ++D G +VGR + GGENVYP E+E L +HP I + V G+ +A+ E V
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEV 507
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V LR Q ++E ++Q C + +K P+ ++ + P+
Sbjct: 508 CAWVVLRSGEQ----------------ATAEEIQQFCH-GQIAHYKVPK-YIRFVDELPM 549
Query: 539 TSTGKIRRDEVRREVMSHLK 558
T TGK+++ +R+ ++ LK
Sbjct: 550 TVTGKVQKFVMRQRMIDELK 569
>gi|54026121|ref|YP_120363.1| AMP-binding protein [Nocardia farcinica IFM 10152]
gi|54017629|dbj|BAD58999.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 555
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 165/566 (29%), Positives = 242/566 (42%), Gaps = 65/566 (11%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW 69
L R AA R +VV I R T ++ V V LA GL G+R GD V I A N +EW
Sbjct: 34 LDRTAAAHPDREAVVDIPSGRRWTYRELVAAVDALAAGLDARGIRKGDRVGIWAPNCAEW 93
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYLELQHTA--- 125
+L A A IG I+ +N + E + + ML+ E S Y+ +
Sbjct: 94 FLTQ-YATAKIGAILVNINPAYRTSELAYVLRQAGVRMLIAAREFKTSDYVAMIDEVRGE 152
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
P L + LG V T D ++ L + + + I +TSGTTG
Sbjct: 153 CPGLEQVLILGDDQWQQVTS---TTPDPVRLAELGA-----ELTMDDPINIQYTSGTTGF 204
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-I 243
PKG +SH ++ + GY E D P H G+ +A GA V
Sbjct: 205 PKGATLSHHNILNNGFFVGELCGYTEQDRICVPVPFYHCFGMVMGNLAATSHGAAIVIPA 264
Query: 244 PKFESKSALEAVEQHCVTSLITVP----AIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
P F+ + L AV TSL VP A++A+L T + +++ + G
Sbjct: 265 PSFDPAATLAAVAAEKCTSLYGVPTMFIAVLAELDTELEKSGAAPDLSTLRTGIMAGSPC 324
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P E+MK + +++ YGMTETS T +
Sbjct: 325 PVEVMKRVIDRLGMSEVCICYGMTETSPVST--------------------QTRRDDDID 364
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ VG+ PH+E+K+ + G + TRG VML YWD+
Sbjct: 365 RRTATVGRVGPHLEVKIVDPATGRTVPRGEPGELCTRGYSVMLGYWDEPEKTAEAIDAAR 424
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGDIG +D+ G V + GR + GGEN+YP E+E L HP I+ V+G+ + R
Sbjct: 425 WMHTGDIGVMDEDGYVAVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDER 484
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E ++A +R+RE + L + +R+ C K L FK PR +V
Sbjct: 485 YGEELMAWIRMREGAE---------------PLDAAAVREFCTGK-LAHFKIPR-YVHVV 527
Query: 534 KPFPLTSTGKIRRDEVRREVMSHLKS 559
+ FP+T TGK+R+ E+R L+S
Sbjct: 528 EEFPMTVTGKVRKAEMRELAREMLQS 553
>gi|229121509|ref|ZP_04250736.1| Feruloyl-CoA synthetase [Bacillus cereus 95/8201]
gi|228661973|gb|EEL17586.1| Feruloyl-CoA synthetase [Bacillus cereus 95/8201]
Length = 496
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 251/553 (45%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ E+ ++ G+ +AI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +++ + L +Q +
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS------ 121
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+V + +T+ LK R + + IIC+TSGTTG PKG V+
Sbjct: 122 ----------YVQRVISITS--LKEIEDRKIDNFVEKNESASFIICYTSGTTGKPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTK 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
+ ++ + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGDLARV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A +
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L+ +V+ +HCR L +K P+ +++ K P +TGK
Sbjct: 441 --------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLVNQLKSR 496
>gi|271966242|ref|YP_003340438.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
gi|270509417|gb|ACZ87695.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
Length = 530
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 157/546 (28%), Positives = 234/546 (42%), Gaps = 68/546 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
R ++V + R T + DV LA LL G+ GD + I A N ++ A A
Sbjct: 31 DREALVDVPSGRRWTYAELDADVNRLALALLASGIAKGDRIGIWAPNCAEWMIVQYATAK 90
Query: 80 IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS 137
IG I+ +N + E + + +R ++ + ++ + V LG
Sbjct: 91 IGAILVNVNPAYRGHELDYVVRQSGLRLLISALTHKGSDYRAMVEEIGFADV---VYLGE 147
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D L A LR S + + A+ I +TSGTTG PKG +SH ++
Sbjct: 148 PGWD------RLLALTAPEERLRER--MASLSADDAINIQYTSGTTGFPKGATLSHHNIL 199
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKSALEAV 255
++ Y E D P H G + + GAC V P F+ ++ L AV
Sbjct: 200 NNGFFVGELIHYDEHDRVCLPVPFYHCFGMVMGNLGATSHGACVVIPAPGFDPEATLRAV 259
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLPSELMKEATNSFP 312
+Q TSL VP T+ + T G+ + + G G P E+MK
Sbjct: 260 QQERCTSLYGVP-------TMFIAELTLAGQYDLSSLRTGIMAGSPCPVEVMKRVVTEMN 312
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
A++ YGMTETS T MT D +LE + VG+ PHV
Sbjct: 313 MAEVAICYGMTETSPVST-MTRSDDSLERRTE-------------------TVGQVMPHV 352
Query: 373 ELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + G + TRG VML YW++ W+ TGD+ ++D
Sbjct: 353 EVKITHPETGLTVPRGEPGELCTRGYSVMLGYWNEPERTAEAIDTARWMHTGDLATMDAD 412
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V +VGR + GGENVYP EVE L +HP I + V+G+ + + E ++A V +R+
Sbjct: 413 GYVNVVGRIKDMVIRGGENVYPREVEEFLYRHPDIADVQVIGVPDEKYGEELMAWVVIRQ 472
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L++E +R+ C K L +K PR +V FP+T TGKIR+
Sbjct: 473 GGT---------------PLTAEAVREFCAGK-LAHYKIPR-YVHVVDGFPMTVTGKIRK 515
Query: 547 DEVRRE 552
E+R E
Sbjct: 516 VEMREE 521
>gi|453078814|ref|ZP_21981540.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452755967|gb|EME14385.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 475
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 221/502 (44%), Gaps = 82/502 (16%)
Query: 54 LRSGDIVAISALNSEWYLEWILAVAF----IGGIVAPLNYRWSFKEASRAITSIRPVMLV 109
+R GD VAI A NS EWI+A AF GG++ P+N R+ EA+ + +++
Sbjct: 51 VRKGDRVAIWAPNSA---EWIIA-AFGLLTAGGVLVPVNTRYKADEATDIVRRSGAKLVL 106
Query: 110 TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA 169
+ +L+L HT LG K D LTA PF A
Sbjct: 107 VQKG----FLDLDHT----------LGVDVPVIDVKSDFLTA---------GEPFECEIA 143
Query: 170 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 229
E I +TSGTTG PKGV+++H + + E D YL P H+ G +
Sbjct: 144 GEDIADIMYTSGTTGRPKGVMMNHLQTLRMFSEWCDLADLREGDRYLIVNPFFHMFGYKA 203
Query: 230 AMAMLMV-GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 288
+ M+ GA + + + + L+ VE+ +T L P + L + R + S
Sbjct: 204 GLVASMIRGATVLPVAVLDVEDVLDLVEREKITMLPGPPTLYQSLLSASRDRDL----SS 259
Query: 289 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 348
++ + G +P EL+K N P +++ YG++E ++ T PG
Sbjct: 260 LRAAVTGSADIPVELIKRIKNELPFETIMTGYGLSEGGTA---------TASRPG----- 305
Query: 349 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 408
+ VG P +++++ DG +L RG +VM Y D A
Sbjct: 306 -------DTFEQIATTVGTPCDGIDVRIADDGE-----VLIRGYNVMQGYLDDPGATAEA 353
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ WL TGD+G +D GG + + GR+ GG N YP E+E L+HP + + V+G
Sbjct: 354 IDADGWLHTGDLGELDAGGRLRINGRKKDMFIVGGFNAYPAEIEGFFLEHPDVDQVAVIG 413
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + RL ++ A V + +++E L RE+ + GFKAPR
Sbjct: 414 VPDERLGQVGKAFVVPKRP------------------VAAEDLIAWGRER-MAGFKAPR- 453
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
FV + PL +TGK+ +D++R
Sbjct: 454 FVEFLDALPLNATGKVMKDQLR 475
>gi|350530832|ref|ZP_08909773.1| long-chain-fatty-acid--CoA ligase [Vibrio rotiferianus DAT722]
Length = 521
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 251/549 (45%), Gaps = 60/549 (10%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L R AA+ + V G+ + + N+A L +GL+ GD VA+S N ++
Sbjct: 8 LERSAALFPSKVALRMGDDEISYASLNKFAGNIAANLKRLGLQVGDKVALSCPNITYFPM 67
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSW----YLELQHTAIPS 128
+ G +V PLN + +E + + E S+ Y +
Sbjct: 68 VYYGILKAGCVVVPLNVLFKGREIAYHLNDSDAKAYFCFEGSEELPMGSYGRQGFSQAEQ 127
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+ +SL + + + D A+ L+ + + + + +I +TSGTTG PKG
Sbjct: 128 CEYFISLSAQGEEGEHAIDAWLAEELESFE------SVTRHGDDTAVILYTSGTTGQPKG 181
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFE 247
+SH+ ++ +++ ++ D + T PL H G + M A ++ G+ V IP+FE
Sbjct: 182 AELSHTNMLTNAMSSQYLMRLEYSDTTMATLPLFHSFGQTVMMNASVLTGSTMVLIPRFE 241
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL----NGGGGLPSEL 303
K +E + QH V+ VP + +A L +++ + + VK L +GG +P E+
Sbjct: 242 PKFVIEQIIQHKVSVFAGVPTMY--IALLRAGEQSPEHSELVKHSLRLGVSGGASMPVEV 299
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+++ F + ++ YG++ET+ TF + G+ P SV QP
Sbjct: 300 IRQFEQRF-ELPVLEGYGLSETAPVATFNHID--------------GDRLPGSVGQPLCG 344
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDI 420
V K A ++K +G + + VM Y+ +P + + W TGDI
Sbjct: 345 YVIKIA---DVKGHGQAIGELGEVCIKSPSVMKGYY----GRPEATRDALRDGWFLTGDI 397
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +D+ GN+++V R I GG NVYP E+E VL+ HP + + VVG + RL E V A
Sbjct: 398 GRVDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMVAVVGEHDDRLGEEVHA 457
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V L + +++C S+VL CRE+ L +K PR V RK P+T+
Sbjct: 458 HVVLHQ-----DAHC-----------KSDVLIAWCREQ-LADYKYPRR-VFIRKALPMTA 499
Query: 541 TGKIRRDEV 549
TGKI + E+
Sbjct: 500 TGKILKREL 508
>gi|336311874|ref|ZP_08566832.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
gi|335864620|gb|EGM69703.1| long-chain-fatty-acid--CoA ligase [Shewanella sp. HN-41]
Length = 575
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 240/549 (43%), Gaps = 70/549 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWS 92
+Q++ + LA GLL++G++ GD V I + N+ +EW L A A IG I+ +N +
Sbjct: 64 RQYLAQIDALATGLLKLGIKPGDRVGIWSPNN---IEWCLTQYATAKIGAIMVCINPAYR 120
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSL 135
+E A+T++ ++ S YLE LQ A+P L + + +
Sbjct: 121 PEELQYALTNVGCRALICAARFKSSNYLEMLYELAPELTSCPAGKLQAKAVPDLEFVIRM 180
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G+ S + D L D+ +P A+ I FTSGTTGSPKG +SH
Sbjct: 181 GAEKSVGMLNFDDLLVDVTADDKATLERIGKELSPLDAINIQFTSGTTGSPKGATLSHHN 240
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALE 253
++ + + D PL H G+ + L GA VF + F+ L+
Sbjct: 241 ILNNGYLVAEAMKFTCHDKLCIPVPLYHCFGMVLGNLVCLAKGAAAVFPGESFDPLITLQ 300
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
VE T+L VP + +A L + T S++ + G P E+M+ N
Sbjct: 301 VVENERCTALHGVPTMF--IAELEHPEFTRFDLRSLRTGVMAGATCPEEVMRRVQNLMYM 358
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ YG TE S L +T D +E + + VG+ PH E
Sbjct: 359 QEVLIGYGQTE-CSPLNHITEIDSPVEK-------------------RVLTVGRALPHTE 398
Query: 374 LKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
+K+ + + G + +RG +M YW+ + E WL +GDIG +D+ G
Sbjct: 399 VKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPDKTAATIDSEGWLHSGDIGQMDEQGY 458
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
V +VGR I GGEN+YP E+E L H + V G+ + + E V A +++R
Sbjct: 459 VQIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGA 518
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
SE++ +R EK FK PR ++ + +P+T TGKI++ +
Sbjct: 519 TISEAD----------------IRHFLTEK-FAYFKVPR-YIKFVDQYPMTVTGKIQKFK 560
Query: 549 VRREVMSHL 557
+R + L
Sbjct: 561 MRELMYQEL 569
>gi|444379507|ref|ZP_21178686.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
gi|443676381|gb|ELT83083.1| Long-chain-fatty-acid--CoA ligase [Enterovibrio sp. AK16]
Length = 516
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 252/546 (46%), Gaps = 57/546 (10%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L R AA+ + V + T +Q + N+A L+ +GL GD VA+S N ++
Sbjct: 8 LERSAALFSDKVAVRMADTAFTFEQLDKLAANVAHHLVSLGLEPGDKVALSCPNIPYFPI 67
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
+ +G +V P+N + +E + + ++S YL T +
Sbjct: 68 AYYGILKVGCVVVPMNVLFKPREVAYHL----------NDSDAKAYLCFDGTEELPMGTF 117
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLR------SLPFTH-SWAPEGAVIICFTSGTTGS 185
G ++ + + +SL+ S PF S + +I +TSGTTG
Sbjct: 118 GQEGFKHAEGCEHFVSMPGNDSSAHSLQAWLSEASQPFEAVSRLGDDTAVILYTSGTTGQ 177
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIP 244
PKG +SH+ ++ ++A ++ D + PL H G + M A ++ GA V +P
Sbjct: 178 PKGAELSHTNMMTNAMASQNLMRLEYSDTTMAALPLFHSFGQTVMMNASILTGATVVLVP 237
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADL--ATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+FE S +E + + VT VP + L A+ +K K R S++ ++GG LP E
Sbjct: 238 RFEPASVIEQIIEQRVTVFAGVPTMYIALQRASEACAEKAEKVRQSLRLGISGGASLPVE 297
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
++++ +F + ++ YG++ET+ TF + L P SV QP
Sbjct: 298 VLRQFEAAF-ELPILEGYGLSETAPVATFNHIDSDRL--------------PGSVGQP-- 340
Query: 363 VCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
+C G ++L S + G + + VM Y+++ A + W +GDIG
Sbjct: 341 LC-GHMIKIIDLAGNSVPTGERGEVCIKSPSVMKGYYNRPEATEETFV-DGWFKSGDIGY 398
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D+ N+++V R I GG NVYP E+E V++ HP I + VVG + RL E + A V
Sbjct: 399 LDEHCNLFIVDRVKDMILRGGYNVYPREIEEVMMCHPAIEMVAVVGEPHERLGEEIHAHV 458
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
L+ ++ E+ +E++ C+E+ L +K PR V+ R FP+T+TG
Sbjct: 459 LLK--------------QDAEVCEEAEIIAW-CKEQ-LADYKYPRR-VIIRSSFPMTATG 501
Query: 543 KI-RRD 547
KI +RD
Sbjct: 502 KILKRD 507
>gi|420865927|ref|ZP_15329316.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|420870721|ref|ZP_15334103.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|420875166|ref|ZP_15338542.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|420989866|ref|ZP_15453022.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|421041581|ref|ZP_15504589.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|421045520|ref|ZP_15508520.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
gi|392064643|gb|EIT90492.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0303]
gi|392066641|gb|EIT92489.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RB]
gi|392070191|gb|EIT96038.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0726-RA]
gi|392184145|gb|EIV09796.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0206]
gi|392222509|gb|EIV48032.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-R]
gi|392234973|gb|EIV60471.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
4S-0116-S]
Length = 546
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 151/566 (26%), Positives = 252/566 (44%), Gaps = 69/566 (12%)
Query: 9 ICQCLSRIAAVKRN--SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + RIA + ++V ++G+R T ++ ++ +ARGL+ +G+ +GD V I A N
Sbjct: 18 IGENFERIARAHPDVGALVDVSGDRRWTYRELDAEINRVARGLMSLGVAAGDRVGIWAPN 77
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLEL 121
EW+L A A IG I+ +N + E + A+ + +R ++ S Y+ +
Sbjct: 78 CA---EWVLVQYATAKIGAILVNINPAYRTHELAYALNQSGVR-TLICAKAFKSSDYVAM 133
Query: 122 QHTAIPS---LRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
+P LR V +G+S ++ V + +T L+ R + + I
Sbjct: 134 ASQVMPDAPGLRDVVFIGTSDWTELVAGAERVTEAALRARMSR-------LSNTDPINIQ 186
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
+TSGTTG PKG +SH ++ + D P H G+ +
Sbjct: 187 YTSGTTGYPKGATLSHRNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTH 246
Query: 237 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA V P F+ LEA+E+ + VP + +A L + +++ +
Sbjct: 247 GATIVMPAPGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMA 304
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK + A + AYGMTETS ++ TL+D L+
Sbjct: 305 GSVCPVEVMKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------- 349
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 409
+ VG+ PH+E+K+ S G + TRG VML YW+ V
Sbjct: 350 -----RTATVGRAHPHIEIKIVDPNSGETVQRRQSGELCTRGYSVMLGYWNDEAHTREVL 404
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W+ TGD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+
Sbjct: 405 DTDGWMHTGDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGV 464
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E + A VR+R +++ + +R + L +K PR +
Sbjct: 465 PDEKYGEELCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-Y 507
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMS 555
V + FP+T TGK+R+ E+R++ +
Sbjct: 508 VHVVESFPMTVTGKVRKIEMRQQTIQ 533
>gi|120402570|ref|YP_952399.1| AMP-binding domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119955388|gb|ABM12393.1| AMP-dependent synthetase and ligase [Mycobacterium vanbaalenii
PYR-1]
Length = 538
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 154/555 (27%), Positives = 239/555 (43%), Gaps = 65/555 (11%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
RIAA ++V +TG R T + +++ +A+GL+ +G SGD V I A N
Sbjct: 23 FERIAATYPDHEALVDVTGGRRWTYAELDREIDTVAKGLMSLGTESGDRVGIWAPNCP-- 80
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHT- 124
EW + A A IG I+ +N + E S + + + ++ T + + +
Sbjct: 81 -EWTIVQYATAKIGAILVNINPAYRTHELSYVLEQSGVSTLISATRFKTSDYVAMVDEVR 139
Query: 125 -AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
+P+L+ + +G+ D + R AD++ LR + S + V I +TSGTT
Sbjct: 140 PDVPALQRVLFIGTDDWDRLRSR----ADVIDDALLRER--SASLSHHDPVNIQYTSGTT 193
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ + G D P H G+ + GA V
Sbjct: 194 GFPKGATLSHRNILNNGFFVTEQIRLGPGDRLCIPVPFYHCFGMVMGNLGCTTHGATMVI 253
Query: 243 -IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
P F+ L+ +E T++ VP + +A + S++ + G P
Sbjct: 254 PAPGFDPGQTLKTIETERCTAVYGVPTMF--IAMQNHADFAERDLSSLRTGIMAGAVCPV 311
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK +++ AYGMTETS ++ TL D LE +
Sbjct: 312 EVMKRCVEEMNMSEISIAYGMTETSP-VSCQTLIDDDLER-------------------R 351
Query: 362 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+G+ PHVE+K+ + HV G TRG VML YW + W+
Sbjct: 352 TSSIGRVHPHVEIKIVDPDTGHVVERGTPGEFCTRGYSVMLGYWRDEEKTAQAVDADGWM 411
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ + G +VGR + GGEN+YP EVE L HP I VVG+ +AR
Sbjct: 412 HTGDLAVMRPDGYCNIVGRIKDVVIRGGENIYPREVEEFLYTHPDIEDAQVVGVPDARYG 471
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E + A +R+R + L + +R+ K L +K PR +V
Sbjct: 472 EEICAWIRMRPGRR---------------ALDAAAVREFAAGK-LAHYKIPR-YVHVVDE 514
Query: 536 FPLTSTGKIRRDEVR 550
FP+T TGKIR+ E+R
Sbjct: 515 FPMTVTGKIRKVEMR 529
>gi|455641051|gb|EMF20249.1| AMP-binding domain protein [Streptomyces gancidicus BKS 13-15]
Length = 530
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 162/547 (29%), Positives = 234/547 (42%), Gaps = 71/547 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T +F V LA L G+ +GD V I A+N EW+ A
Sbjct: 33 DREALVDVPSGRRWTYAEFAARVDELASALFNSGVTTGDRVGIWAVNCP---EWVFTQYA 89
Query: 77 VAFIGGIVAPLN--YRWSFKEASRAITSIRP-VMLVTDESSDSWYL-ELQHTAIPSLRWH 132
A IG I+ +N YR E + IR V V+ ++SD + E P LR
Sbjct: 90 TARIGAIMVNINPAYRTHEVEYVLKQSGIRLLVASVSHKTSDYRAMAEEVRGRCPELREV 149
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +G + D + R T D P + + V I +TSGTTG PKG +S
Sbjct: 150 VYIGDPAWDALIAR--ATPD----------PVHPELSCDDPVNIQYTSGTTGFPKGATLS 197
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ ++ Y E D P H G+ +A GAC V P F+ +
Sbjct: 198 HHNILNNGYFVGELIDYSEQDRVCIPVPFYHCFGMVMGNLAATSHGACMVIPAPSFDPAA 257
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV+Q TSL VP + +A L S++ + G P E+MK
Sbjct: 258 TLRAVQQERCTSLYGVPTMF--IAELNLPDFASYDLTSLRTGIMAGSPCPVEVMKRVVAE 315
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS P + + + G VG+ P
Sbjct: 316 MHMEQVSICYGMTETS-------------------PVSLQTRMEDDLEHRTGT-VGRVLP 355
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+K+ + G + TRG VML YWD+ W+ TGD+ +
Sbjct: 356 HIEVKIVDPATGVTVPRGTSGELCTRGYSVMLGYWDEPEKTAEAIDRGRWMHTGDLAVMR 415
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V +VGR I GGEN+YP E+E L HP + + VVG+ + R E V+ACV
Sbjct: 416 DDGYVEIVGRIKDMIIRGGENIYPREIEEFLYGHPKVADVQVVGVPHERYGEEVLACVIP 475
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGK 543
R+ L L+ L +C + L +K P RL +L + FP+T +GK
Sbjct: 476 RD-------------PADPLTLAE--LHAYC-DGQLAHYKVPSRLELL--ETFPMTVSGK 517
Query: 544 IRRDEVR 550
+R+ E+R
Sbjct: 518 VRKIELR 524
>gi|289448150|ref|ZP_06437894.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
gi|289421108|gb|EFD18309.1| fatty-acid-CoA ligase fadD35 [Mycobacterium tuberculosis CPHL_A]
Length = 547
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 160/563 (28%), Positives = 240/563 (42%), Gaps = 85/563 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R + + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 REALVDMVARRRFNYSELLTDVHRLATGLVRAGIGPGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--------- 127
A IG I+ +N + +E A+ M++ S D+ Y + P
Sbjct: 99 AEIGAILVTINPAYRVREVEYALRQSGVAMVIAVASFKDADYAAMLAEVGPRCPDLADVI 158
Query: 128 ---SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
S RW +L + D + TA L G V I +TSGTT
Sbjct: 159 LLESDRWD-ALAGAEPDLPALQQ--TAARLDG--------------SDPVNIQYTSGTTA 201
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF- 242
PKGV +SH ++ ++GY D P H G+ +A GA V
Sbjct: 202 YPKGVTLSHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIP 261
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
P F+ + L AV+ TSL P + +A L T S++ + G P E
Sbjct: 262 APGFDPAATLRAVQDERCTSLYGAPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVE 319
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ + + YGMTETS P + +SV + G
Sbjct: 320 VMRKVISRMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVG 360
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+KV + VG TRG VM YW+ V + W+
Sbjct: 361 T-VGRVGPHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMH 419
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E
Sbjct: 420 TGDLAEMDPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGE 479
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKP 535
++A V+LR N L+ E LR++C + + FK PR LW
Sbjct: 480 ELMAVVKLR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDE 521
Query: 536 FPLTSTGKIRRDEVRREVMSHLK 558
FP+T TGK+R+ E+R++ + +L+
Sbjct: 522 FPMTVTGKVRKVEMRQQALEYLR 544
>gi|169631453|ref|YP_001705102.1| AMP-binding domain-containing protein [Mycobacterium abscessus ATCC
19977]
gi|420912039|ref|ZP_15375351.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|420918500|ref|ZP_15381803.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|420923662|ref|ZP_15386958.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|420929323|ref|ZP_15392602.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|420969000|ref|ZP_15432203.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
gi|420979661|ref|ZP_15442838.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|420985045|ref|ZP_15448212.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|421010205|ref|ZP_15473314.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|421015206|ref|ZP_15478281.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|421020303|ref|ZP_15483359.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|421026289|ref|ZP_15489332.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|421031530|ref|ZP_15494560.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|421036336|ref|ZP_15499353.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|169243420|emb|CAM64448.1| Probable fatty-acid-CoA ligase [Mycobacterium abscessus]
gi|392111391|gb|EIU37161.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-S]
gi|392114033|gb|EIU39802.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0125-R]
gi|392126311|gb|EIU52062.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-1108]
gi|392128315|gb|EIU54065.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-S]
gi|392163939|gb|EIU89628.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0212]
gi|392170041|gb|EIU95719.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
6G-0728-R]
gi|392195811|gb|EIV21430.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0119-R]
gi|392198278|gb|EIV23892.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-R]
gi|392206026|gb|EIV31609.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0122-S]
gi|392209812|gb|EIV35384.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0731]
gi|392219412|gb|EIV44937.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-R]
gi|392220188|gb|EIV45712.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0930-S]
gi|392244656|gb|EIV70134.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
3A-0810-R]
Length = 546
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 253/566 (44%), Gaps = 69/566 (12%)
Query: 9 ICQCLSRIAAVKRN--SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + RIA + ++V ++G+R T ++ ++ +ARGL+ +G+ +GD V I A N
Sbjct: 18 IGENFERIARAHPDVGALVDVSGDRRWTYRELDAEINRVARGLMSLGVAAGDRVGIWAPN 77
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLEL 121
EW+L A A IG I+ +N + E + A+ + +R ++ S Y+ +
Sbjct: 78 CA---EWVLVQYATAKIGAILVNINPAYRTHELAYALNQSGVR-TLICAKAFKSSDYVAM 133
Query: 122 QHTAIPS---LRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
+P LR V +G+S ++ V + +T L+ + L T + I
Sbjct: 134 ASQVMPDAPGLRDVVFIGTSDWTELVAGAERVTETALRA-RMSQLSNTDP------INIQ 186
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
+TSGTTG PKG +SH ++ + D P H G+ +
Sbjct: 187 YTSGTTGYPKGATLSHRNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTH 246
Query: 237 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA V P F+ LEA+E+ + VP + +A L + +++ +
Sbjct: 247 GATIVMPAPGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMA 304
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK + A + AYGMTETS ++ TL+D L+
Sbjct: 305 GSVCPVEVMKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------- 349
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 409
+ VG+ PH+E+K+ S G + TRG VML YW+ V
Sbjct: 350 -----RTATVGRAHPHIEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVL 404
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W+ TGD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+
Sbjct: 405 DTDGWMHTGDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGV 464
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E + A VR+R +++ + +R + L +K PR +
Sbjct: 465 PDEKYGEELCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-Y 507
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMS 555
V + FP+T TGK+R+ E+R++ +
Sbjct: 508 VHVVESFPMTVTGKVRKIEMRQQTIQ 533
>gi|397680629|ref|YP_006522164.1| acyl-CoA synthetase YngI [Mycobacterium massiliense str. GO 06]
gi|414582915|ref|ZP_11440055.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|418251261|ref|ZP_12877458.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|420880763|ref|ZP_15344130.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|420886457|ref|ZP_15349817.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|420891999|ref|ZP_15355346.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|420895610|ref|ZP_15358949.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|420900054|ref|ZP_15363385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|420905599|ref|ZP_15368917.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|420933639|ref|ZP_15396913.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|420937662|ref|ZP_15400931.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|420943901|ref|ZP_15407156.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|420947586|ref|ZP_15410836.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|420954009|ref|ZP_15417251.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|420958183|ref|ZP_15421417.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|420963887|ref|ZP_15427111.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|420973839|ref|ZP_15437030.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|420994126|ref|ZP_15457272.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|420999902|ref|ZP_15463037.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|421004424|ref|ZP_15467546.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|353449086|gb|EHB97485.1| AMP-binding domain protein [Mycobacterium abscessus 47J26]
gi|392079259|gb|EIU05086.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0422]
gi|392082220|gb|EIU08046.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0421]
gi|392085672|gb|EIU11497.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0304]
gi|392094922|gb|EIU20717.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0708]
gi|392097415|gb|EIU23209.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0817]
gi|392103503|gb|EIU29289.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1212]
gi|392118067|gb|EIU43835.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-1215]
gi|392133502|gb|EIU59245.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-151-0930]
gi|392143177|gb|EIU68902.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-152-0914]
gi|392145507|gb|EIU71231.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-153-0915]
gi|392152922|gb|EIU78629.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0626]
gi|392154616|gb|EIU80322.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
1S-154-0310]
gi|392161722|gb|EIU87412.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium abscessus
5S-0921]
gi|392178684|gb|EIV04337.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-R]
gi|392180228|gb|EIV05880.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0307]
gi|392193127|gb|EIV18751.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0912-S]
gi|392246800|gb|EIV72277.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-1231]
gi|392247909|gb|EIV73385.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
2B-0107]
gi|395458894|gb|AFN64557.1| Putative acyl-CoA synthetase YngI [Mycobacterium massiliense str.
GO 06]
Length = 546
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 251/550 (45%), Gaps = 65/550 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+++V ++G+R T ++ ++ +ARGL+ +G+ +GD V I A N EW+L A A
Sbjct: 33 DALVDVSGDRRWTYRELDAEIDRVARGLMSLGIAAGDRVGIWAPNCA---EWVLVQYATA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTD-ESSDSWYLELQ-HTAIPSLRWHVS 134
IG I+ +N + E + A+ + IR ++ T +SSD + Q P LR V
Sbjct: 90 KIGAILVNINPAYRTHELAYALNQSGIRTLICATAFKSSDYVAMASQVRPDAPGLRDVVF 149
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G+S ++ V + +T L+ R +++ + I +TSGTTG PKG +SH
Sbjct: 150 IGTSDWTELVAGAERVTEAALRA---RMSQLSNA----DPINIQYTSGTTGYPKGATLSH 202
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ + D P H G+ + GA V P F+
Sbjct: 203 RNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDPGRT 262
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEA+E+ + VP + +A L + +++ + G P E+MK +
Sbjct: 263 LEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEVMKRCIDEM 320
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A + AYGMTETS ++ TL+D L+ + VG+ PH
Sbjct: 321 HMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTATVGRAHPH 360
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ S G + TRG VML YW+ V + W+ TGD+ + +
Sbjct: 361 IEIKIVDPDSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTGDLAVMRE 420
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E + A VR+R
Sbjct: 421 DGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMR 480
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+++ + +R + L +K PR +V + FP+T TGK+R
Sbjct: 481 PG---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFPMTVTGKVR 523
Query: 546 RDEVRREVMS 555
+ E+R++ +
Sbjct: 524 KIEMRQQTIQ 533
>gi|167838422|ref|ZP_02465281.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|424901542|ref|ZP_18325058.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|390931917|gb|EIP89317.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
Length = 576
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 250/558 (44%), Gaps = 83/558 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFAGEVDALATALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYTEMIAEIAPELATTHAGGALHAARVPSLRTVVT 178
Query: 135 LGSSSSDFVNKRDMLTADIL-KGYSLRSLPFTHSWAPEGAVIIC-------FTSGTTGSP 186
+ SD + AD+L +G R+ + GA + C FTSGTTGSP
Sbjct: 179 M----SDVAPAGMLSFADVLARG---RAALDSARLDAIGATLDCRDPINIQFTSGTTGSP 231
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-P 244
KG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 232 KGATLTHRNVVNNARSIARVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGA 291
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
FE + L AV T+L VP + +A L +++ + G P E M
Sbjct: 292 AFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLGTLRTGIMAGSPCPIETM 349
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K +++ AYGMTETS P +F + T +S+ + +
Sbjct: 350 KRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSSTTDSLEK-RTTT 389
Query: 365 VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ TGD
Sbjct: 390 VGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGD 448
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V
Sbjct: 449 LATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVC 508
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + LR E++ E LR+ CR + +K PR +V + P+T
Sbjct: 509 AWIVLR---------------TGEVMTDDE-LREFCR-GQIAHYKVPR-YVRFVDELPMT 550
Query: 540 STGKIRRDEVRREVMSHL 557
TGK+++ +R ++ L
Sbjct: 551 VTGKVQKFVMRERMIDEL 568
>gi|441519811|ref|ZP_21001483.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
gi|441460564|dbj|GAC59444.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
Length = 550
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 250/564 (44%), Gaps = 84/564 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
++++ +R T +F +DV+ LA GLL G+ GD V + A N EW+L A A
Sbjct: 39 DALIDAAVDRTWTYAEFRRDVVALAAGLLRHGVTPGDRVGLWAPNR---FEWVLTQFAAA 95
Query: 79 FIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWY---LELQHTAIPSLRWHVS 134
IG I+ +N + E + A+ S ++L DS Y LE P LR V
Sbjct: 96 EIGAILVVINPSYRRHELAYALKQSGTSLVLAATSFRDSEYAVMLEDVRDQTPDLREVVL 155
Query: 135 LGSSSSDFVNKRDMLT----------ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
S + +MLT A+I G + P+ + I +TSGTTG
Sbjct: 156 FESDAF-----AEMLTPPSAAEVAEIAEIAAGLN-----------PDDPINIQYTSGTTG 199
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
+PKGV ++H + +++ Y + D P H G+ + C + IP
Sbjct: 200 APKGVTLTHLNIGNNGYLVGSLLEYTQHDRICLPVPFYHCFGMVMGNLAAIAFGCAMVIP 259
Query: 245 K--FESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGL 299
F+ K+ L AVE++ TSL VP + +A+LA L D S++ + G
Sbjct: 260 APAFDPKATLAAVEKYRCTSLYGVPTMFIAELALLDSSADEGTTFDLSSLRTGIMAGSPC 319
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P ++M+ + +++ YGMTETS T + D L G V
Sbjct: 320 PEQVMRRVIDEMNMSQVSICYGMTETSPVSTQTRMDD-------DLDLRVGTV------- 365
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
G+ PH+E+K+ + G TRG VM YW+ V +
Sbjct: 366 ------GRVGPHLEIKIADPLTGETLPRGETGEFRTRGYSVMKGYWNDPEKTAEVLDADG 419
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+G + D G V + GR + GGEN+YP E+E L HP II V+G+ + +
Sbjct: 420 WMATGDLGVMADNGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIIDAQVIGVPDEK 479
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E ++A +R+RE D+ L+++ +R+ +++ K P+ +V
Sbjct: 480 YGEELMAWIRVRE-------GADE--------LTADSIREFAT-GHISRHKIPK-YVQIV 522
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
FP+T TGK+R+ E+R + L
Sbjct: 523 DEFPMTVTGKVRKVEMRERAIEVL 546
>gi|430806585|ref|ZP_19433700.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
gi|429501182|gb|EKZ99525.1| AMP-binding domain protein [Cupriavidus sp. HMR-1]
Length = 570
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 268/590 (45%), Gaps = 81/590 (13%)
Query: 5 SQAHICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
S+ + L+ AA+ R +VV N T +F +V +A GL +GLR GD V I
Sbjct: 26 SELTVPALLANTAALHGSRPAVVFREQNIRWTWNEFSAEVDRMAAGLHALGLRKGDRVGI 85
Query: 63 SALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWY 118
+ N EW+L A A +G ++ +N + E A+ + ++ E+ S Y
Sbjct: 86 WSPNR---FEWLLTQFATARVGLVMVNINPAYRLAELEYALNKVGCKAIIAPEAFKTSRY 142
Query: 119 LELQHT----------------AIPSLRWHVSLGS-SSSDFVNKRDMLT--ADILKGYSL 159
L++ T +P LRW + + + + R++L A++ K +L
Sbjct: 143 LDMLATLAPELAKAEPGALNAARLPLLRWVIRMEDVPTPGMLTFRELLVRGANVPK-TAL 201
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 219
+ T + I FTSGTTG+PKG ++H ++ + + + E D
Sbjct: 202 DEI--TAGLDARDPINIQFTSGTTGAPKGATLTHRNIVNNGRSIAGAMRFSEQDKLCIPV 259
Query: 220 PLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLI 277
P H G+ +A + GA VF + F + + AV + T+L VP + +A L
Sbjct: 260 PFYHCFGMVLGVLACVSTGASMVFPGEAFHPGATMAAVSEERCTALHGVPTMF--IAQLD 317
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 337
+ S++ + G P E+MK A++ AYGMTETS
Sbjct: 318 DPDFSKYDFSSLRTGIMAGAPCPVEVMKRVMADMHLAEITIAYGMTETS----------- 366
Query: 338 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGA 392
P +F + T + + + + VG+ PH+E KV DG + G + TRG
Sbjct: 367 --------PVSFQSATDDPIDK-RVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGY 417
Query: 393 HVMLRYWD-QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
VML YWD + + ++ G W+ TGD+ +ID+ G +VGR + GGENVYP E+
Sbjct: 418 SVMLGYWDDEERTREAIRDG--WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREI 475
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E L +HP + + V G+ + + E V A + L+ QS+ ++E +
Sbjct: 476 EEFLFRHPKVQSVQVFGVPDEKYGEEVCAWIVLKPG---------QSATDEE-------I 519
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 561
R +CR++ + +K PR ++ + P+T TGK+++ +R ++ L P
Sbjct: 520 RNYCRDQ-IAHYKIPR-YIRFVDEMPMTITGKVQKFVMRDQMTQELGISP 567
>gi|392417372|ref|YP_006453977.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|390617148|gb|AFM18298.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 487
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 237/525 (45%), Gaps = 87/525 (16%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI---GGIVAPLNYRWSF 93
+ V + A +++G+ GD VA+ A NS +WI+A I GG++ P+N R+
Sbjct: 35 ELVDRIRRAAGSFVDLGVAKGDRVALWAPNSA---DWIIAAFGIMTAGGVLVPVNTRFKA 91
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTAD 152
+EA+ ++ S +LV S +L + SL V + SDF+
Sbjct: 92 EEAADVVSRSGAKAVLVQ-----SGFLGQDY----SLALDVPMIDLGSDFL--------- 133
Query: 153 ILKGYSLRSLPFTHS---WAPEGAVI--ICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 207
RS PF + W +GA I + FTSGTTG PKG +++H + +
Sbjct: 134 ------CRSAPFERAPSEWL-DGADIADVIFTSGTTGRPKGAMMNHRQTLRAYEEWATLA 186
Query: 208 GYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITV 266
E D YL P H GL + + A + GA V + F+ ++ V + +T L
Sbjct: 187 DLREGDRYLMINPFFHTFGLKAGLVASFLRGATMVPVAAFDVDRVVDLVARESITMLPGP 246
Query: 267 PAIMADLATLIRVKKTWKGR-DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 325
P + L T+ KGR +++ + G +P EL++ + P L++ YG+TE
Sbjct: 247 PTLYHSLLTVAD-----KGRLATLRAAVTGAADIPVELIRRIRDELPFQTLMTGYGLTEA 301
Query: 326 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVG 385
+ TL PG P+ NV + G P VE+ + DG
Sbjct: 302 GNV---------TLSRPGDSPE---NVARTA---------GLPCEDVEVDIADDGE---- 336
Query: 386 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 445
+L RG +VM Y D LA + WL TGD+G+ D G + +VGR+ GG N
Sbjct: 337 -VLVRGYNVMQGYLDDPLATAEAIDEDGWLHTGDLGTFTDEGRLCIVGRKKDMFIVGGFN 395
Query: 446 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 505
YP E+E LL+HPGI V+G+ + RL ++ A + S+ QS
Sbjct: 396 AYPAEIEGFLLEHPGIAQAAVIGVPDERLGQVGKAFL--------VRSDAAQS------- 440
Query: 506 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
LS++ + R + + GFK PR V + PL +TGK+ +D ++
Sbjct: 441 LSADEVIDWSRAR-MAGFKVPR-SVEFLDELPLNATGKVMKDRLQ 483
>gi|392555397|ref|ZP_10302534.1| AMP-binding domain protein [Pseudoalteromonas undina NCIMB 2128]
Length = 577
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/549 (25%), Positives = 240/549 (43%), Gaps = 70/549 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFK 94
++F Q + LA GLL +G++SGD V I S N +W L A A IG I+ +N +
Sbjct: 66 KEFQQQIDQLAMGLLALGVKSGDRVGIWSPNNIQWCLTQ-FATAKIGAIMVCINPAYRPS 124
Query: 95 EASRAITSIRPVMLVTDES-SDSWYL----------------ELQHTAIPSLRWHVSLGS 137
E A+ S+ L+T S S Y+ EL+ IPSL+ + +G
Sbjct: 125 ELQYALNSVECSTLITATSFKGSHYVNMLQSLAPELNSCQKGELKAAKIPSLKNVICIGD 184
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
+ + + + A + + + I FTSGTTG+PKG ++H ++
Sbjct: 185 EPVNGMFSFNEVLAMPTDAHKFELQAVAKTLNCNQDINIQFTSGTTGNPKGATLTHKNIL 244
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAV 255
+L + + E D PL H G+ + + P F+ K+ LE V
Sbjct: 245 NNALLVAQAMHFTEHDKLCIPVPLYHCFGMVLGSLLCVSKGAAAIYPSDSFDPKTTLEVV 304
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPK 313
+Q T L VP + L + D +++ + G P ++M++
Sbjct: 305 QQEKCTGLHGVPTMFISELEL----NNFSDYDLSTLRTGVMAGSTCPEQVMRKVQTLMNM 360
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ AYG TE S + +T D ++E Q VG+ H E
Sbjct: 361 NQVVIAYGQTE-CSPINNITETDSSIER-------------------QVTTVGRALAHTE 400
Query: 374 LKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
+K+ + G + +RGA +M YW+ + + WL +GD+G +D G
Sbjct: 401 VKIIDEVGEVQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNQGWLHSGDLGVMDSEGF 460
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
V +VGR I GGEN+YP E+E VL +PGI + GI + + E V A ++ +E
Sbjct: 461 VSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKFGEEVCAWIQPKEGE 520
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
+L + +R ++K L FK P+ ++ + + +P+T TGK+++ +
Sbjct: 521 ----------------VLDEQAIRLFLKDK-LAYFKQPK-YIRFVEHYPMTVTGKLQKFK 562
Query: 549 VRREVMSHL 557
+R ++ + L
Sbjct: 563 MREQMQAEL 571
>gi|357021891|ref|ZP_09084122.1| long-chain-fatty-acid--CoA ligase [Mycobacterium thermoresistibile
ATCC 19527]
gi|356479639|gb|EHI12776.1| long-chain-fatty-acid--CoA ligase [Mycobacterium thermoresistibile
ATCC 19527]
Length = 493
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/538 (27%), Positives = 242/538 (44%), Gaps = 76/538 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T + V + A ++G+ GD AI A NS EWI+A AF
Sbjct: 23 DAEAVVDGPLRLTFTEVVHRIRCAAGAFRDLGIGKGDRAAIWAPNSA---EWIIA-AFGL 78
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ EA+ I ++ R V++ D S + L + L +
Sbjct: 79 LTAGGVLVPVNTRFRPDEAADIIGRSNARAVLVQKDFLSQDYTL-----SDTDLAGGPPV 133
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH-- 193
SDF++ D + G + I FTSGTTG PKG +++H
Sbjct: 134 IDIKSDFLSGGAPFERDDIAGTDISD--------------IIFTSGTTGRPKGAMMNHLQ 179
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSAL 252
S + + A +A + G D YL P H GL + + A + GA V + F+++ +
Sbjct: 180 SLRMYEEWATLADLREG--DRYLMINPYFHTFGLKAGLIASFLRGATMVPVAVFDAEQVV 237
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+ VE+ +T L P + L +R K +++ + G +P EL++ + P
Sbjct: 238 DLVERERITMLPGPPTLYHSLLA-VRDKDKLA---TLRAAVTGAADIPVELIRRIRDELP 293
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L++ YG+TE + TL PG P+ G P V
Sbjct: 294 FRSLMTGYGLTEAGNV---------TLSRPGDTPEQVAT------------TAGLPCEDV 332
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
E+++ +DG +L RG VM Y D + WL TGD+GS DD G + +V
Sbjct: 333 EVRIAADGE-----VLVRGYGVMQGYLDDPAGTAQAIDPDGWLHTGDLGSFDDTGRLRIV 387
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR+ GG N YP E+E L++HP + V+G+ + RL ++ A + L S + ++
Sbjct: 388 GRKKDMFIVGGFNAYPAEIEGFLMEHPAVAQAAVIGVPDERLGQVGKAFIVLDASARRAD 447
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+S+E + + R++ + G+K PR V +R PL +TGK+ ++++R
Sbjct: 448 GPT----------VSAEDIIEWSRQR-MAGYKVPR-HVEFRDALPLNATGKVVKEQLR 493
>gi|383825038|ref|ZP_09980193.1| AMP-dependent synthetase and ligase [Mycobacterium xenopi
RIVM700367]
gi|383335754|gb|EID14178.1| AMP-dependent synthetase and ligase [Mycobacterium xenopi
RIVM700367]
Length = 496
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 234/520 (45%), Gaps = 72/520 (13%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
+A L +G+ GD VA+ N +L AV G ++ PLN E S +
Sbjct: 34 IATSLRNLGVGPGDKVAVQLPNLPHFLFAYFAVLKAGAVMVPLNPLLRAPEVSYHLRDSD 93
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
+L+T E+ + E A + V+L + ++R T + Y
Sbjct: 94 SRLLITFET---FAEEAVKGAGDLPTYVVNLPGN-----DQRPAGTKHFDELYFAEDTGD 145
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
+ +I +TSGTTG PKG ++H L + + G+ +DD+ + P+ H+
Sbjct: 146 IEPTNADDTAVIIYTSGTTGKPKGAELTHFQLFMNCTVAGELFGFRDDDIGIAVLPMFHV 205
Query: 225 GGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
GLSS + + + G V +P+F+ K+ +E + H T VP + L ++
Sbjct: 206 FGLSSVLNVTVRFGGTLVLVPRFDPKTVIEELALHRCTIFSGVPTMYFAL-----LQADT 260
Query: 284 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 341
G D +++ ++GG +P E+++ FP ++ YG++ET+S+ TF
Sbjct: 261 HGHDLSALRVGISGGAAIPGEVIRAFEEKFPGVVILEGYGLSETASTTTF---------- 310
Query: 342 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-------GSSHVGRILTRGAHV 394
N+ S Q + + +GKP V++ V + G +VG I+ RG +V
Sbjct: 311 ---------NI---SAEQRKVLSIGKPIWGVQVSVVDENDHELPPGPDNVGEIVIRGHNV 358
Query: 395 MLRYWDQFLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 450
M Y++ KP +T E W TGD+ D+ G ++V R+ + GG NVYP E
Sbjct: 359 MKGYYN----KPE-ATAEAFRNGWFHTGDLAYRDEDGYFFIVDRKKDLVIRGGYNVYPRE 413
Query: 451 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 510
+E VL H G+ V+G + +L + V+A V +E + L+SE
Sbjct: 414 IEEVLFDHHGVAAAAVIGKPDEKLGQEVLAFVVAKEGVE----------------LTSEE 457
Query: 511 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L HC+E+ L +K PR + + P TGK+ + E+R
Sbjct: 458 LIAHCKER-LAAYKYPREIRIVDE-LPTGPTGKVLKKELR 495
>gi|167921063|ref|ZP_02508154.1| acyl-CoA synthetase [Burkholderia pseudomallei BCC215]
Length = 576
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 246/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 179 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + VGA VF FE +
Sbjct: 239 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSVGAKMVFPGAAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 516 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|148557266|ref|YP_001264848.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
gi|148502456|gb|ABQ70710.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 539
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 155/535 (28%), Positives = 232/535 (43%), Gaps = 66/535 (12%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSF 93
+ + V +LARG L GL+ GD + I A N +EW+L A A G ++ +N +
Sbjct: 49 ELLARVDDLARGFLGAGLKPGDRIGIWAPNC---VEWVLVQFAAARAGLVLVNINPAYRA 105
Query: 94 KEASRAITSIRPVMLVTDESSDS----WYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
E +RA+ + LV S S L +P LR S+G
Sbjct: 106 GEMARALQMVGCAALVLARSFKSSDYVAMLAEVRGELPELRLAFSIGEGEHPGCRP---- 161
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY 209
A ++ G + P P+ I FTSGTTG PKG +SH ++ +G
Sbjct: 162 LASVMGGDA----PLPRDVRPDDPTNIQFTSGTTGLPKGATLSHRNIVNNGYMVGHRIGL 217
Query: 210 GEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVP 267
D PL H G+ +A + GA F + F+ S LEAV T+L VP
Sbjct: 218 SSADTLCIPVPLYHCFGMVMGNLACVAHGATMCFPGEGFDPGSTLEAVAAEGCTALYGVP 277
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ + + G +++ + G P +M+ + ++ AYGMTETS
Sbjct: 278 TMFVAMLEYPDFDRHDLG--TLRTGIMAGSLCPISVMRAVLDRMNMREVTIAYGMTETSP 335
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGS----S 382
++F + D +E + VG+ PH+E KV +DG
Sbjct: 336 -VSFQSAMDDAIEL-------------------RVSTVGQVQPHLEAKVVDADGKVVPLG 375
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
G + TRG VML YW V E W+ TGD+ ++D+ G +VGR I G
Sbjct: 376 EPGELCTRGYSVMLGYWGDPEKTADVIDAEGWMHTGDLATLDEQGYGRIVGRIKDMIIRG 435
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
GEN+YP E+E LL HP I+ + G+ +A+ E V A W S S
Sbjct: 436 GENIYPREIEEHLLTHPDIVDAQIFGVPDAKFGEEVCA-------WVISRSGA------- 481
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
LS E + HCR++ + +K PR L + FPLT TGK+++ +R +++ L
Sbjct: 482 ---LSVEAVIAHCRDR-IAHYKVPRHVRLVEQ-FPLTVTGKVQKFAMREIMVAEL 531
>gi|419708416|ref|ZP_14235886.1| AMP-binding domain protein [Mycobacterium abscessus M93]
gi|382944448|gb|EIC68756.1| AMP-binding domain protein [Mycobacterium abscessus M93]
Length = 546
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 253/566 (44%), Gaps = 69/566 (12%)
Query: 9 ICQCLSRIAAVKRN--SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + RIA + ++V ++G+R T ++ ++ +ARGL+ +G+ +GD V I A N
Sbjct: 18 IGENFERIARAHPDVGALVDVSGDRRWTYRELDAEINRVARGLMSLGVAAGDRVGIWAPN 77
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLEL 121
EW+L A A IG I+ +N + E + A+ + +R ++ S Y+ +
Sbjct: 78 CA---EWVLVQYATAKIGAILVNINPAYRTHELAYALNQSGVR-TLICAKAFKSSDYVAM 133
Query: 122 QHTAIPS---LRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
+P LR V +G+S ++ V + +T L+ + L T + I
Sbjct: 134 ASQVMPDAPGLRDVVFIGTSDWTELVAGAERVTEAALRA-RMSQLSNTDP------INIQ 186
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
+TSGTTG PKG +SH ++ + D P H G+ +
Sbjct: 187 YTSGTTGYPKGATLSHRNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTH 246
Query: 237 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA V P F+ LEA+E+ + VP + +A L + +++ +
Sbjct: 247 GATIVMPAPGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMA 304
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK + A + AYGMTETS ++ TL+D L+
Sbjct: 305 GSVCPVEVMKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------- 349
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 409
+ VG+ PH+E+K+ S G + TRG VML YW+ V
Sbjct: 350 -----RTATVGRAHPHIEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVL 404
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W+ TGD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+
Sbjct: 405 DTDGWMHTGDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGV 464
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E + A VR+R +++ + +R + L +K PR +
Sbjct: 465 PDEKYGEELCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-Y 507
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMS 555
V + FP+T TGK+R+ E+R++ +
Sbjct: 508 VHVVESFPMTVTGKVRKIEMRQQTIQ 533
>gi|94309555|ref|YP_582765.1| AMP-binding domain protein [Cupriavidus metallidurans CH34]
gi|93353407|gb|ABF07496.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
metallidurans CH34]
Length = 570
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 267/590 (45%), Gaps = 81/590 (13%)
Query: 5 SQAHICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
S+ + L+ AA+ R +VV N T +F +V +A GL +GLR GD V I
Sbjct: 26 SELTVPALLANTAALHGSRPAVVFREQNIRWTWNEFSAEVDRMASGLHALGLRKGDRVGI 85
Query: 63 SALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWY 118
+ N EW+L A A +G ++ +N + E A+ + ++ E+ S Y
Sbjct: 86 WSPNR---FEWLLTQFATARVGLVMVNINPAYRLAELEYALNKVGCKAIIAPEAFKTSRY 142
Query: 119 LELQHT----------------AIPSLRWHVSLGS-SSSDFVNKRDMLT--ADILKGYSL 159
L++ T +P LRW + + + + R++L A++ K L
Sbjct: 143 LDMLATLAPELAKAEPGALNAARLPLLRWVIRMEDVPTPGMLTFRELLARGANVPK-TEL 201
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 219
+ T + I FTSGTTG+PKG ++H ++ + + + E D
Sbjct: 202 DEI--TAGLDARDPINIQFTSGTTGAPKGATLTHRNIVNNGRSIAGAMRFSEQDKLCIPV 259
Query: 220 PLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLI 277
P H G+ +A + GA VF + F + + AV + T+L VP + +A L
Sbjct: 260 PFYHCFGMVLGVLACVSTGASMVFPGEAFHPGATMAAVSEERCTALHGVPTMF--IAQLD 317
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 337
+ S++ + G P E+MK A++ AYGMTETS
Sbjct: 318 DPDFSKYDFSSLRTGIMAGAPCPVEVMKRVMADMHLAEITIAYGMTETS----------- 366
Query: 338 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGA 392
P +F + T + + + + VG+ PH+E KV DG + G + TRG
Sbjct: 367 --------PVSFQSATDDPIDK-RVSTVGRVQPHLECKVVDVDGQTLPIGATGELCTRGY 417
Query: 393 HVMLRYWD-QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
VML YWD + + ++ G W+ TGD+ +ID+ G +VGR + GGENVYP E+
Sbjct: 418 SVMLGYWDDEERTREAIRDG--WMHTGDLATIDEEGYCNIVGRVKDMLIRGGENVYPREI 475
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E L +HP + + V G+ + + E V A + L+ QS+ ++E +
Sbjct: 476 EEFLFRHPKVQSVQVFGVPDEKYGEEVCAWIVLKPG---------QSATDEE-------I 519
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 561
R +CR++ + +K PR ++ + P+T TGK+++ +R ++ L P
Sbjct: 520 RNYCRDQ-IAHYKIPR-YIRFVDEMPMTITGKVQKFVMRDQMTQELGISP 567
>gi|448301120|ref|ZP_21491115.1| long-chain-fatty-acid--CoA ligase [Natronorubrum tibetense GA33]
gi|445584634|gb|ELY38949.1| long-chain-fatty-acid--CoA ligase [Natronorubrum tibetense GA33]
Length = 523
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 227/512 (44%), Gaps = 50/512 (9%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
++A GLLE G G ++ +S ++E + A A+ G + P++YR K S +
Sbjct: 43 DIASGLLEAGFEPGAHLSALLTDSIEFVELLFASAYAGLVFNPISYRVPPKRLSYVLEHA 102
Query: 104 RPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDF----VNKRDMLTADILKGYSL 159
LV D+ L+ +P+L V + + S D + + D D ++
Sbjct: 103 ESAGLVFDKECLETVDALEAEELPNLVVGVGVDAESVDVSYGQLEEGDDADTDRMRDADE 162
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 219
+ S ++ +TSGTTG PKGV+ SH ++ +L + DV +
Sbjct: 163 VDVTVDES----DPALLLYTSGTTGRPKGVLHSHRTVVNAALVSLPYNRLRPTDVNVALG 218
Query: 220 PLCHIGGL-SSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 278
PL H+G L + + L VGAC+V +F+ + LE +E +T++ VP + L
Sbjct: 219 PLYHVGPLLCNVLPALNVGACNVVQHEFDPATTLERIESEGITTMWGVPTHVRALVD--- 275
Query: 279 VKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE-TSSSLTFMTLY 335
+ + + RD V+ I G +P+ + K A + + ++AYG TE +L + +
Sbjct: 276 -EPSIEDRDIEHVRMIQYSGAAMPAAVAKRARDHVSDCEFVNAYGTTEIVFGTLIYPEFH 334
Query: 336 DPTLETPGQL-PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHV 394
D L + GQ P A V + P V + VG +L +
Sbjct: 335 DDKLGSIGQAAPNAAVRVVDSENPVPNAVV---------------DTDEVGELLVNASTC 379
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
ML YW A V+ + W TGD+G D+ G ++ V R++ I SGGEN+YP EVE +
Sbjct: 380 MLEYWRDPEAT-DVAIVDGWYRTGDLGRRDEDGFLYFVDRKDDMIVSGGENIYPAEVEDL 438
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L HP ++ VVG+ + E+V A V + D SS + E +
Sbjct: 439 LHGHPDVVSGAVVGVPDDEWGEVVTAFV--------VPATEDLSSDDLEAFFVA------ 484
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L FK PR +V + + P TS+ KI R
Sbjct: 485 --SDELESFKRPRQYV-FEQELPKTSSDKIDR 513
>gi|386399261|ref|ZP_10084039.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385739887|gb|EIG60083.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 564
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 248/562 (44%), Gaps = 66/562 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAF 79
R ++V+ + T ++F + V LA G + +GL G+ + I +LN EW L A A
Sbjct: 36 REALVSPSHGVRWTWREFAERVDALAAGFVALGLERGERIGIWSLNRPEWTLTQ-FAAAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHT-------------- 124
G I+ +N + E A+ + +VT + S Y+++ +T
Sbjct: 95 AGLILVTINPAYRLSELEFALQKVGCSAIVTATAFKTSNYMDMLNTLLPELATAKPGQLR 154
Query: 125 --AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+P LR + +G + D + + + S + AV + FTSGT
Sbjct: 155 AARLPDLRIVIQIGGPACPGTIPFDEVAGMAGPPHREQLAALGASLQFDDAVNVQFTSGT 214
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TGSPKGV ++H ++ + E D PL H G+ +A + +GA V
Sbjct: 215 TGSPKGVTLTHHNILNNGYFVGRAMRLTEADRICIPVPLYHCFGMVMGNLASVTLGATMV 274
Query: 242 FIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+ + F+ + L +EQ T+L VP + +A L + + S++ + G P
Sbjct: 275 YPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHSEFSNFNLTSLRTGIMAGAPCP 332
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
E+MK + ++ AYGMTETS ++F + D L+
Sbjct: 333 IEVMKRVNSEMNMGEVTIAYGMTETSP-VSFQSAVDDPLDR------------------- 372
Query: 361 QGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+ VG+ PHVE+KV DG G + TRG VML YW++ V W+
Sbjct: 373 RVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVMLGYWEEPEKTADVLDANGWM 432
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGDI IDD G +VGR + GGEN+YP E+E L +HP I + + G+A+ R
Sbjct: 433 HTGDIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYG 492
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E + A +R+R L+ E +R C + + K PR +V +
Sbjct: 493 EELCAWIRVRSGET----------------LTMEEVRAFC-DGQIAHNKIPR-YVEFVDE 534
Query: 536 FPLTSTGKIRRDEVRREVMSHL 557
FP+T TGKI++ +R EV L
Sbjct: 535 FPMTVTGKIQKFLMRDEVEQRL 556
>gi|167587926|ref|ZP_02380314.1| acyl-CoA synthetase [Burkholderia ubonensis Bu]
Length = 575
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 158/558 (28%), Positives = 245/558 (43%), Gaps = 86/558 (15%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
++F +V LA GL +G+ GD V I + N SEW L A A IG I+ LN +
Sbjct: 62 REFADEVDVLATGLAALGIARGDRVGIWSPNRSEWLLTQ-FATARIGAILVNLNPAYRLA 120
Query: 95 EASRAITSIR-PVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLGS 137
E A+ + ++ + S Y++ L +PSLR VSLG
Sbjct: 121 EIEYALNKVGCKAVIAAERFKSSGYVDMLQAIAPELACCAPGDLHAVRVPSLRTIVSLGE 180
Query: 138 SS-------SDFVNK-RDMLTADILK--GYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+ +D + + R L D L G +L S+ + I FTSGTTGSPK
Sbjct: 181 IAPAGMFRFADVMARGRAALDRDALDALGATLASI---------DPINIQFTSGTTGSPK 231
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK- 245
G +SH ++ + + + + E D PL H G+ A +A + GA VF +
Sbjct: 232 GATLSHRNVVNNARSIAQAMRFSEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEA 291
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + L AV T+L VP + +A L S++ + G P E MK
Sbjct: 292 FDPAATLAAVADERCTALHGVPTMF--IAELDHPDFAKYDLSSLRTGIMAGSPCPIETMK 349
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ +++ AYGMTETS ++F + D LE + V
Sbjct: 350 RVVSQMHLSEITIAYGMTETSP-VSFQSSTDDPLEM-------------------RTTTV 389
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G+ PH+E+K+ V G + T+G VM YWD V + W+ TGD+
Sbjct: 390 GRIQPHLEVKIVDPSGGIVPVGATGELCTKGYSVMRGYWDDDEKTRDVLI-DGWMHTGDL 448
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++D G +VGR + GGEN+YP E+E L +HP I V G+ +A+ E V A
Sbjct: 449 ATLDANGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKYGEEVCA 508
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ LR Q +E + +R C + + +K PR ++ + P+T
Sbjct: 509 WIVLRAGEQLTEDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELPMTV 550
Query: 541 TGKIRRDEVRREVMSHLK 558
TGK+++ +R+ ++ LK
Sbjct: 551 TGKVQKFVMRQRMIDELK 568
>gi|300776376|ref|ZP_07086234.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
gi|300501886|gb|EFK33026.1| AMP-binding enzyme [Chryseobacterium gleum ATCC 35910]
Length = 541
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 247/557 (44%), Gaps = 76/557 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ ++V + N T Q+F +A+ LL +G ++GD + I + N EW+L A
Sbjct: 33 QEALVCVHQNYRATYQEFYNQTTAVAKALLFLGAKAGDRIGIWSSNR---YEWVLLQYAT 89
Query: 78 AFIGGIVAPLNYRWSFKEASRAI--TSIRPVM--LVTDESSDSWYLELQHTAIPSLRWHV 133
A IG I+ +N + E + + + +R + L S+ +E PSL +
Sbjct: 90 ARIGTILVNINPAYRTHELTYVLNQSEVRFIFSSLSFKTSNYKEMVEYAKEVCPSLEHEI 149
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ FVN ++ ++L F + V I +TSGTTG PKGV +SH
Sbjct: 150 FFDENWEHFVNNGQEISDEVLHS-------FEEHVQFDDPVNIQYTSGTTGFPKGVTLSH 202
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK--FESKS 250
++ + Y E D P H G+ + GAC V IP F+ +
Sbjct: 203 HNILNNGYFIGIRLKYTEKDRVCIPVPFYHCFGMVIGNICCTAHGACMV-IPNDSFDPEI 261
Query: 251 ALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEA 307
L+AV + TSL VP + +A+LA K + D S++ + G P E+MK+
Sbjct: 262 TLKAVSEEKCTSLYGVPTMFIAELAV-----KDFDSYDFSSLRTGVMAGSVCPPEIMKKV 316
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
N ++ YGMTETS T TL LE Q VG
Sbjct: 317 ENLMNIKEMSICYGMTETSPVST-QTLIGTPLEK-------------------QVSTVGT 356
Query: 368 PAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
H+E+K+ + + G + TRG VML+YW+ V W+ TGD+
Sbjct: 357 VQDHLEIKIIDENGRTLKRGEHGELCTRGYSVMLKYWNDPENTKKVLDDARWMHTGDMAV 416
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D G + + GR I GGEN+ P+E+E L + I+ + ++G+ + + E V+A V
Sbjct: 417 MDKDGYITISGRIKDLIIRGGENISPKEIEDFLYTYTNILDVQIIGVPSEKFGEEVMAWV 476
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTS 540
++R K +++E L+++C+ + + +K P+ W+ FP+T
Sbjct: 477 KVR----------------KGFTITAEELQEYCKGR-IAHYKVPK---YWKFVDEFPMTI 516
Query: 541 TGKIRRDEVRREVMSHL 557
+GKIR+ E+R M L
Sbjct: 517 SGKIRKVEMREISMREL 533
>gi|126464300|ref|YP_001045413.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17029]
gi|126106111|gb|ABN78641.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17029]
Length = 520
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 238/546 (43%), Gaps = 63/546 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+S I R + +F D+ + +GL G+R G VA+ NS+ Y+ A+A +G
Sbjct: 25 DSAALIFRGRTRSWAEFAADMARIQQGLAAQGVRRGSRVAVLDRNSDDYVLLGYALAGMG 84
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD 141
++AP+N E S + + +P++LVT +L+ AI L +L +
Sbjct: 85 AVLAPVNMWLRPAELSYILGNCQPLLLVTSAE----FLDAAREAIAPLADPPALVLRGDE 140
Query: 142 FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
+ A+I G + SW + ++ +TSGTTG PKG +ISH ++ +L
Sbjct: 141 APGT--IAWAEIAAGEGRAPVSRPESW--DDPHLVLYTSGTTGRPKGALISHRRTVLDAL 196
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVT 261
A + + G G+ + + PL H G M V +FE+ +A+ +E H
Sbjct: 197 AALPVFGIGQHERFFCYMPLFHTGAWDYLKLYFMRRGAAVIAERFEADAAVAEIEAHRCN 256
Query: 262 SLITVPAIMADLATLIRVKKTWKGRD-SVKKILNGGGGLPSELMKEATNSFPKA-----K 315
+ VP ++ + + W D S +++ PS L+ +F + +
Sbjct: 257 GMFGVPLVLRQMVE----SQAWGTSDMSSMRLIAYANYDPSALILRIVEAFRERGAEGLR 312
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ +AYG+TE + N ++ +P + +G+P P V++
Sbjct: 313 IANAYGLTEGGPYICI-------------------NRPETAMSKP--LSIGQPVPGVQVA 351
Query: 376 VCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
+ + V G I RG +M Y ++ A G WL TGD+G +D+ G V
Sbjct: 352 LLDEDLREVPPGALGEICVRGPALMSGYLNRPEATAEAFAGG-WLHTGDLGRVDEEGFVH 410
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
LV R+ I++GGENV+ +EVE L+ HP I VVG+ + +
Sbjct: 411 LVDRKKDMIRTGGENVFAKEVEQTLVTHPAIRDCAVVGLPDD----------------DY 454
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E L+ +R R++ L GFKAPR V++ P T GKI++ EVR
Sbjct: 455 GERVVAVVVAEPGTDLAEAEVRSFVRDR-LAGFKAPRQ-VIFVPELPKTPAGKIKKHEVR 512
Query: 551 REVMSH 556
+ + +
Sbjct: 513 KAIAAE 518
>gi|440699134|ref|ZP_20881436.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
gi|440278386|gb|ELP66431.1| AMP-binding domain protein [Streptomyces turgidiscabies Car8]
Length = 527
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 245/557 (43%), Gaps = 76/557 (13%)
Query: 13 LSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R AA R ++V + R T +Q DV LA ++ G+ +GD V I A+N
Sbjct: 22 LDRAAARWPDREALVDVPSGRRWTYEQLGSDVDELAYAMIASGIAAGDRVGIWAVNCP-- 79
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYLELQ-H 123
EW+L A A IG ++ +N + E + +L ++SD + +
Sbjct: 80 -EWVLVQYATARIGAVMVNINPAYRTHEVEYVLNQSGSSLLFASLGHKTSDYRAMVGEVR 138
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P LR V +G S D + R +PF + + + I +TSGTT
Sbjct: 139 GRCPQLRETVFIGDPSWDALLARGT------------PVPFP-ELSCDDPINIQYTSGTT 185
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF 242
G PKG +SH ++ + Y E D P H G+ +A GAC V
Sbjct: 186 GFPKGATLSHHNILNNGYFVGESISYTEQDRVCVPVPFYHCFGMVMGNLAATSHGACVVI 245
Query: 243 -IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
P FE + L AV + TSL VP + +A L S++ + G P
Sbjct: 246 PAPSFEPAATLRAVAEERCTSLYGVPTMF--IAELNLPDFATYDLSSLRTGIMAGSPCPV 303
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK A++ YGMTETS ++ T D LE H+
Sbjct: 304 EVMKRVVAEMHMAEVSICYGMTETSP-VSLQTRRDDDLE-----------------HRTG 345
Query: 362 GVCVGKPAPHVELKVC--SDGSSH----VGRILTRGAHVMLRYWDQ-FLAKPSVSTGEVW 414
VG+ PH+E+KV ++G++ G + TRG VML YW + SV G W
Sbjct: 346 --TVGRVLPHIEVKVVDPANGTTQPRGTAGELCTRGYSVMLGYWQEPEKTAESVDPGR-W 402
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+ + + G V +VGR I GGEN+YP E+E L HP I + VVG+ + R
Sbjct: 403 MHTGDLAVMREDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIADVQVVGVPHERY 462
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWR 533
E V+ACV E + E L +E L+ C E L +K P RL VL
Sbjct: 463 GEEVLACVIPHE--------------DTEPLTLAE-LQAFC-EGRLAHYKIPSRLRVL-- 504
Query: 534 KPFPLTSTGKIRRDEVR 550
FP+T +GK+R+ E+R
Sbjct: 505 DAFPMTVSGKVRKVELR 521
>gi|419716125|ref|ZP_14243523.1| AMP-binding domain protein [Mycobacterium abscessus M94]
gi|382941331|gb|EIC65650.1| AMP-binding domain protein [Mycobacterium abscessus M94]
Length = 546
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 152/566 (26%), Positives = 253/566 (44%), Gaps = 69/566 (12%)
Query: 9 ICQCLSRIAAVKRN--SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + RIA + ++V ++G+R T ++ ++ +ARGL+ +G+ +GD V I A N
Sbjct: 18 IGENFERIARAHPDVGALVDVSGDRRWTYRELDAEINRVARGLMSLGVAAGDRVGIWAPN 77
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLEL 121
EW+L A A IG I+ +N + E + A+ + +R ++ S Y+ +
Sbjct: 78 CA---EWVLVQYATAKIGAILVNINPAYRTHELAYALNQSGVR-TLICAKAFKSSDYVAM 133
Query: 122 QHTAIPS---LRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
+P LR V +G+S ++ V + +T L+ + L T + I
Sbjct: 134 ASQVMPDAPGLRDVVFIGTSDWTELVAGAERVTEAALRA-RMSQLSNTDP------INIQ 186
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
+TSGTTG PKG +SH ++ + D P H G+ +
Sbjct: 187 YTSGTTGYPKGATLSHRNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTH 246
Query: 237 GACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA V P F+ LEA+E+ + VP + +A L + +++ +
Sbjct: 247 GATIVMPAPGFDPGRTLEAIERERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMA 304
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK + A + AYGMTETS ++ TL+D L+
Sbjct: 305 GSVCPVEVMKRCIDEMHMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------- 349
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVS 409
+ VG+ PH+E+K+ S G + TRG VML YW+ V
Sbjct: 350 -----RTATVGRAHPHIEIKIVDPNSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVL 404
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W+ TGD+ + D G ++GR + GGEN+YP E+E LL HP I + VVG+
Sbjct: 405 DTDGWMHTGDLAVMRDDGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGV 464
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E + A VR+R +++ + +R + L +K PR +
Sbjct: 465 PDEKYGEELCAWVRMRPD---------------RVVIDAVAIRAFASGR-LAHYKIPR-Y 507
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMS 555
V + FP+T TGK+R+ E+R++ +
Sbjct: 508 VHVVESFPMTVTGKVRKIEMRQQTIQ 533
>gi|359452445|ref|ZP_09241793.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20495]
gi|358050423|dbj|GAA78042.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20495]
Length = 577
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 246/555 (44%), Gaps = 70/555 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++V LA GLL +G++ G+ V I S N EW L A A IG I+ +N +
Sbjct: 64 TYKEFQKEVNQLAMGLLALGVKPGERVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYR 122
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ S+ L+T + S YLE L A+P+L+ + +
Sbjct: 123 PNELQYALNSVECSTLITASNFKGSDYLEMLNGLAPELATCDKYTLNLKALPTLKNIIRI 182
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G +S ++ + + + L + E + I FTSGTTG+PKG ++H
Sbjct: 183 GDEASPGMHSFNDVVNLPTAAHELELKAIGENLNAEQDINIQFTSGTTGNPKGATLTHKN 242
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALE 253
++ +L + + DD PL H + + + P F++K+ L+
Sbjct: 243 ILNNALFVAESMHFTSDDKLCIPIPLYHCFAMVLGSLLCVSKGAAAIYPSDSFDAKTTLD 302
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSF 311
V+Q T+L VP + L + D +++ + G P ++M++
Sbjct: 303 VVQQEGCTALHGVPTMFISELEL----SNFNDYDLSTLRTGVMAGSTCPEQVMRKVQTQM 358
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYG TE S + +T D ++E Q VG+ H
Sbjct: 359 NMHQVLIAYGQTE-CSPINNITETDSSIER-------------------QVTTVGRALAH 398
Query: 372 VELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + + G + ++GA +M YW+ + E WL +GD+G +D
Sbjct: 399 TEVKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDETKTKATIDEEGWLHSGDLGVMDTE 458
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V +VGR I GGEN+YP E+E VL +PGI + GI + + E V A ++ +E
Sbjct: 459 GFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKYGEEVCAWIQPKE 518
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ +L + +R ++K L FK PR + + + +P+T TGK+++
Sbjct: 519 ----------------DAVLDEQAIRDFLKDK-LAYFKMPR-HIRFVENYPMTVTGKLQK 560
Query: 547 DEVRREVMSHLKSLP 561
++R ++ L P
Sbjct: 561 FKMREQMQEELSENP 575
>gi|456014381|gb|EMF47996.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 563
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 260/565 (46%), Gaps = 91/565 (16%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++ Q + A L ++G++ GD V+I N + + + GGIV N ++ +E
Sbjct: 52 EELYQSSMKFANYLQKLGIKKGDRVSIMLPNCPQAVISFYGILYAGGIVVMTNPLYTERE 111
Query: 96 --------ASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSS-SSDFVNKR 146
++AI S+ +L S +L++ + ++ +++ + F+ K+
Sbjct: 112 IVYQMNDSGAKAIISLD--ILFPRISKAIKETQLENVIVTGIKDYLTFPKNLVYPFIQKK 169
Query: 147 -------------DMLTADILKGY--SLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ L +I+K ++ PF E ++ +T GTTGSPKGV++
Sbjct: 170 QYGMTVKVEHRGINHLFTEIMKTAQPTVVETPFDFE---EDLALLQYTGGTTGSPKGVML 226
Query: 192 SHSALIVQSL---AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFE 247
+H LI + + + GE+ + + PL H+ GL++ + + +M+G V +PKF+
Sbjct: 227 THKNLISNATMCDSWLYKCKKGEETI-MGIIPLFHVYGLTTVLILSVMLGNKMVLLPKFD 285
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
++AL+ + + T P + L + + K S++ ++G LP+E+ +E
Sbjct: 286 PETALKTINKQKPTLFPGAPTLYIGLMSHPDIAKY--DLSSIEACMSGSAPLPAEV-QEK 342
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+ KL+ YG+TETS +T L +G SV G
Sbjct: 343 FEALTGGKLVEGYGLTETSP-VTHSNL-------------VWGERIKGSV--------GI 380
Query: 368 PAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
P P + K+ G++ +G I +G VM YW+ KP + + WL TG
Sbjct: 381 PYPDTDCKIFQTGTTIPIPNGEIGEIAIQGPQVMKGYWN----KPEETAATIVDGWLLTG 436
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G +DD G+ ++V R+ I +GG N+YP E+E VL +H + VV GI + E V
Sbjct: 437 DLGYMDDEGHFFIVDRKKDMIIAGGFNIYPREIEEVLYEHEAVQECVVAGIPDPYRGETV 496
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A + L+E + +E E L +CRE+ L FK PR++ +RK P
Sbjct: 497 KAYIVLKEGYTVTE----------------EELNAYCREQ-LASFKVPRVYE-FRKELPK 538
Query: 539 TSTGKI-RRDEVRREVMSHLKSLPS 562
T+ GKI RR V EV +++PS
Sbjct: 539 TAIGKILRRSLVDEEVAKQNEAVPS 563
>gi|30261960|ref|NP_844337.1| acyl-CoA synthetase [Bacillus anthracis str. Ames]
gi|47527224|ref|YP_018573.1| acyl-CoA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49184801|ref|YP_028053.1| acyl-CoA synthetase [Bacillus anthracis str. Sterne]
gi|65319244|ref|ZP_00392203.1| COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Bacillus anthracis str. A2012]
gi|165870247|ref|ZP_02214903.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0488]
gi|167633121|ref|ZP_02391447.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0442]
gi|167638350|ref|ZP_02396627.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0193]
gi|170686403|ref|ZP_02877624.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0465]
gi|170706090|ref|ZP_02896552.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0389]
gi|177650895|ref|ZP_02933792.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0174]
gi|190566506|ref|ZP_03019424.1| putative feruloyl-CoA synthetase [Bacillus anthracis str.
Tsiankovskii-I]
gi|227815251|ref|YP_002815260.1| acyl-CoA synthetase [Bacillus anthracis str. CDC 684]
gi|229600600|ref|YP_002866332.1| acyl-CoA synthetase [Bacillus anthracis str. A0248]
gi|254684524|ref|ZP_05148384.1| acyl-CoA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254734827|ref|ZP_05192539.1| acyl-CoA synthetase [Bacillus anthracis str. Western North America
USA6153]
gi|254741228|ref|ZP_05198916.1| acyl-CoA synthetase [Bacillus anthracis str. Kruger B]
gi|254755482|ref|ZP_05207516.1| acyl-CoA synthetase [Bacillus anthracis str. Vollum]
gi|254760018|ref|ZP_05212042.1| acyl-CoA synthetase [Bacillus anthracis str. Australia 94]
gi|386735699|ref|YP_006208880.1| feruloyl-CoA synthetase [Bacillus anthracis str. H9401]
gi|421510042|ref|ZP_15956941.1| acyl-CoA synthetase [Bacillus anthracis str. UR-1]
gi|421635754|ref|ZP_16076353.1| acyl-CoA synthetase [Bacillus anthracis str. BF1]
gi|30256586|gb|AAP25823.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. Ames]
gi|47502372|gb|AAT31048.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178728|gb|AAT54104.1| feruloyl-CoA synthetase, putative [Bacillus anthracis str. Sterne]
gi|164714135|gb|EDR19656.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0488]
gi|167513651|gb|EDR89020.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0193]
gi|167531933|gb|EDR94598.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0442]
gi|170129092|gb|EDS97957.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0389]
gi|170669479|gb|EDT20221.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0465]
gi|172083356|gb|EDT68417.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0174]
gi|190562641|gb|EDV16608.1| putative feruloyl-CoA synthetase [Bacillus anthracis str.
Tsiankovskii-I]
gi|227004733|gb|ACP14476.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. CDC 684]
gi|229265008|gb|ACQ46645.1| putative feruloyl-CoA synthetase [Bacillus anthracis str. A0248]
gi|384385551|gb|AFH83212.1| Feruloyl-CoA synthetase [Bacillus anthracis str. H9401]
gi|401819884|gb|EJT19055.1| acyl-CoA synthetase [Bacillus anthracis str. UR-1]
gi|403396282|gb|EJY93519.1| acyl-CoA synthetase [Bacillus anthracis str. BF1]
Length = 496
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 146/557 (26%), Positives = 251/557 (45%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A L+ E+ ++ G+ +AI + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ A+A + I PLN R + E + +L +++ + L +Q +
Sbjct: 64 LEYIVLFFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIDNFVEKNESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K P
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLVNQLKSR 496
>gi|27378059|ref|NP_769588.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
110]
gi|27351205|dbj|BAC48213.1| bll2948 [Bradyrhizobium japonicum USDA 110]
Length = 525
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 247/567 (43%), Gaps = 71/567 (12%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
M+ A++ + A + N+ R + F +A L+ +G++ G+ +
Sbjct: 1 MSTQPLANLADMVRERATSRGNATAYEFEGRVTSFAAFDIKTNRVANALISMGVKKGERI 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYL 119
A NS+ Y E ++ ++AP+N+R + E + + R PV+ V E ++
Sbjct: 61 AYLGKNSDLYFELLMGAMKADVVMAPVNWRLAGPEVAFIVADCRAPVLFVGPE-----FI 115
Query: 120 ELQH---TAIPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA 173
L IP +R ++ + DF RD + D K +P +
Sbjct: 116 TLVRQIRDQIPGVRTIITTEGGAPEWQDFTAWRDAQSGDDPK------VPIDT----KDI 165
Query: 174 VIICFTSGTTGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
I +TSGTTG PKG ++SH+ + VQ+ K + DDV L P+ HIGG
Sbjct: 166 AIQLYTSGTTGKPKGAMLSHANFLNLVQTGNAADKPEWNRWSTDDVSLVAMPIFHIGGSG 225
Query: 229 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 288
+ L GA V +F+ L+ EQ +T L VPA M + R K R
Sbjct: 226 WGVMGLYHGARGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAKTVDFSR-- 283
Query: 289 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 348
+K +L G +P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 284 LKYMLYGASPIPAALLKECIEVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA 341
Query: 349 FGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFL 403
GK P VE+ + +DG VG I TR M YW+
Sbjct: 342 -----------------GKALPGVEIAILDADGKPLPPRQVGEIATRSGSNMAGYWNLPE 384
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
A S G+ WL TGD G +D+ G +++ R I SGGENVYP EVE+ L HP +
Sbjct: 385 ATASTLRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENVYPAEVESALCDHPDVAE 444
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
V+G+ + + E V A V ++ Q + ++ + RE+ + GF
Sbjct: 445 AAVIGVPDDKWGEAVKAVVVMKPGKQATATD----------------IINFTRER-IAGF 487
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVR 550
K P+ V + P +GKI R ++R
Sbjct: 488 KTPKS-VEFLPTLPRNPSGKILRRQLR 513
>gi|333915332|ref|YP_004489064.1| long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
gi|333745532|gb|AEF90709.1| Long-chain-fatty-acid--CoA ligase [Delftia sp. Cs1-4]
Length = 564
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 241/562 (42%), Gaps = 69/562 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ +VV+ T + ++V +A LL GL+ GD + I + N+ +L A A
Sbjct: 36 KEAVVSCHQGIRYTYLELQREVDRMASALLRAGLKPGDRIGIWSHNNVEWLVTQFATAKA 95
Query: 81 GGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLE----------------LQH 123
G I+ +N + E A+ + ++V + YLE L+
Sbjct: 96 GVILVNINPAYRVAELEYALAKVECKALIVMPSFKTTDYLEMIRSIAPEVSGAVPGRLES 155
Query: 124 TAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+PSL+ + +G+ + F+ D+L ++ SL A+ I FTSGT
Sbjct: 156 AKLPSLKTVIQIGNGTVPGFMRFSDLLATGDPADQAVHSL--GARLRSTDAINIQFTSGT 213
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TGSPKG ++H ++ + DD PL H G+ + +
Sbjct: 214 TGSPKGATLTHRNVLNNGFFIGEAMRLSPDDRLCIPVPLYHCFGMVVGNLAALTHGTTIV 273
Query: 243 IPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
P FE+ S L AV+ T+L VP + +A L + +++ + G P
Sbjct: 274 YPNDAFEAVSVLRAVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTLRTGVMAGSPCP 331
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
E+MK N ++ AYGMTETS + T +TP +
Sbjct: 332 IEVMKRVVNEMHMGEVTIAYGMTETSPASC-----QSTTDTP---------------LEK 371
Query: 361 QGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+ +GK PH+ELKV S S VG + TRG VM YW+ E W
Sbjct: 372 RVSTIGKVLPHLELKVISPESGEILPVGAVGELCTRGYSVMRGYWEDAAKTSEAIDAEGW 431
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ +GD+ +ID+ G V + GR + GGENVYP EVE L +HP I + V+G+ + +
Sbjct: 432 MHSGDLATIDEDGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHPAIQDVQVIGVPDQKY 491
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E + A LR+ SE LR C+ + + +K PR ++ + +
Sbjct: 492 GEELCAWAILRDGATLSEDG----------------LRAFCKGQ-IAHYKIPR-YIRFVE 533
Query: 535 PFPLTSTGKIRRDEVRREVMSH 556
FP+T TGKI++ V RE+M
Sbjct: 534 SFPMTVTGKIQK-FVMREMMKE 554
>gi|397736475|ref|ZP_10503157.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396927665|gb|EJI94892.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 545
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 239/548 (43%), Gaps = 56/548 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R+++V R T + +DV +A GLL+ G+ GD V I A N EW L A A
Sbjct: 36 RDALVDRPSGRRWTYAELRRDVDAVAAGLLKRGIGKGDRVGIWAPNCPEWTL-IQFATAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHVSL 135
IG ++ +N + E + +LV+ +SSD + +E P L V L
Sbjct: 95 IGAVLVNINPAYRAHELKYVLDQAGIRLLVSAPEFKSSDYAAMIEEVRPQCPDLEMVVLL 154
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
GS+ + M + + S P + I +TSGTTG PKG +SH
Sbjct: 155 GSAEWSRLASDGMAAHEADPALLPAAQAALSSDDP---INIQYTSGTTGFPKGATLSHHN 211
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESKSALE 253
++ + Y E+D P H G+ +A GA + P F+ K+ L+
Sbjct: 212 ILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACTSHGATMIIPGPSFDPKATLQ 271
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AVE TSL VP + +A L S++ + G P E+MK+
Sbjct: 272 AVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEVMKQVIEQMGM 329
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
A++ YGMTETS ++ T D T++ + VG+ PH+E
Sbjct: 330 AEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVSTVGRVGPHLE 369
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + G + TRG VML YW+ W+ TGDIG +D G
Sbjct: 370 VKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTGDIGVMDSDG 429
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++ VR+++
Sbjct: 430 YVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKDG 489
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ L + +R+ C K L +K P+ +V FP+T TGK+R+
Sbjct: 490 AE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFPMTVTGKVRKV 532
Query: 548 EVRREVMS 555
E+R + +
Sbjct: 533 EMREQSLD 540
>gi|167740791|ref|ZP_02413565.1| acyl-CoA synthetase [Burkholderia pseudomallei 14]
gi|217423840|ref|ZP_03455340.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
gi|217392903|gb|EEC32925.1| AMP-binding domain protein [Burkholderia pseudomallei 576]
Length = 576
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 155/564 (27%), Positives = 248/564 (43%), Gaps = 69/564 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R +VV T ++F +V LA L+E+G+ GD V I + N +EW L A A
Sbjct: 47 RAAVVFREQGVRRTWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATAR 105
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE-----------------L 121
IG ++ +N + E A+ + +L+ E S Y E L
Sbjct: 106 IGAVLVNVNPAYRLAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVL 165
Query: 122 QHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+PSLR V++ ++ + ++ D+L S R + + I FTS
Sbjct: 166 CAARVPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTS 225
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 239
GTTGSPKG ++H ++ + + ++ E D PL H G+ S +A + GA
Sbjct: 226 GTTGSPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAK 285
Query: 240 HVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
VF FE + L AV T+L VP + +A L +++ + G
Sbjct: 286 MVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSP 343
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
P E MK +++ AYGMTETS P +F + T +S+
Sbjct: 344 CPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLE 384
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ + VG+ PH+E K+ + V G + TRG VML YWD A+ + +
Sbjct: 385 K-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDG 442
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++
Sbjct: 443 WMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSK 502
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A + LR ++ LR+ C + +K PR +V +
Sbjct: 503 YGEEVCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYKVPR-YVRFV 544
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
P+T TGK+++ +R ++ L
Sbjct: 545 DELPMTVTGKVQKFVMRERMIDEL 568
>gi|433459238|ref|ZP_20417071.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
gi|432191472|gb|ELK48421.1| AMP-dependent synthetase and ligase [Arthrobacter crystallopoietes
BAB-32]
Length = 545
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 242/554 (43%), Gaps = 55/554 (9%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+R++++ R + + QDV LARGLL G+ GD + I + N +EW + A A
Sbjct: 31 ERDALIEAATGRRWSYAELRQDVDRLARGLLAQGIGRGDRIGIWSPNCAEWTIVQ-YATA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVT---DESSDSWYLELQ-HTAIPSLRWHVS 134
IG I+ +N + E +T ML+T D SD + L+ A P V
Sbjct: 90 KIGAILVNVNPAYRLHELEFVVTQSGMRMLITAPSDARSDYAGMSLKVREACPGPLEIVV 149
Query: 135 L--GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+ G +S D + A R + + I +TSGTTG PKG ++
Sbjct: 150 IDDGGASPDGALTLGQVVASAESVPPARLQERMEQLRADDPINIQYTSGTTGFPKGATLT 209
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKS 250
H ++ + ++GY +D + P H G+ + +P F +
Sbjct: 210 HRNILNNGFSIGELMGYTPEDRVVLPVPFYHCFGMVIGNLNIYSHGAAAILPGRSFSAAD 269
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+AV+ H TSL VP + +A L +++ + G P E+MK +
Sbjct: 270 TLQAVQDHRGTSLYGVPTMF--IAELALEDFADYDLSTLRTGVMAGSPCPVEIMKRVISD 327
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS P + + +S+ + + VG+ P
Sbjct: 328 MNMGEVAICYGMTETS-------------------PVSTMTRSEDSISR-RTSTVGRTMP 367
Query: 371 HVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E ++ + +G + TRG VM YW++ + W+ TGD+ S+D
Sbjct: 368 HLESRIVDTQTGETTERGVIGELHTRGYSVMQGYWNEPEKTALAVDQDGWMHTGDLASMD 427
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G + + GR + GGEN+YP E+E L QHP I + V+G+ + + E ++AC+ L
Sbjct: 428 EDGYITIEGRMKDMVIRGGENIYPREIEDFLYQHPDIQDVQVIGVPDEKYGEELMACIVL 487
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R L++E + C+ + L FK P+ V R FP+T +GK+
Sbjct: 488 RPGAPE---------------LTAEDIAAFCQGR-LAHFKIPKC-VEVRADFPMTVSGKV 530
Query: 545 RRDEVRREVMSHLK 558
R++++R E L+
Sbjct: 531 RKEQMREEAAEKLR 544
>gi|365872354|ref|ZP_09411892.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|421051469|ref|ZP_15514463.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|363993499|gb|EHM14722.1| AMP-binding domain protein [Mycobacterium massiliense CCUG 48898 =
JCM 15300]
gi|392240072|gb|EIV65565.1| putative FATTY-ACID-CoA LIGASE FADD35 [Mycobacterium massiliense
CCUG 48898]
Length = 546
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 250/550 (45%), Gaps = 65/550 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+++V ++G+R T ++ ++ +ARGL+ +G+ +GD V I A N EW+L A A
Sbjct: 33 DALVDVSGDRRWTYRELDAEIDRVARGLMSLGIAAGDRVGIWAPNCA---EWVLVQYATA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTD-ESSDSWYLELQ-HTAIPSLRWHVS 134
IG I+ +N + E + A+ + IR ++ T +SSD + Q P LR V
Sbjct: 90 KIGAILVNINPAYRTHELAYALNQSGIRTLICATAFKSSDYVAMASQVRPDAPGLRDVVF 149
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+G+S ++ V + +T L+ R +++ + I +TSGTTG PKG +SH
Sbjct: 150 IGTSDWTELVAGAERVTEAALRA---RMSQLSNA----DPINIQYTSGTTGYPKGATLSH 202
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ + D P H G+ + GA V P F+
Sbjct: 203 RNVLNNGFFVAESIQLQAGDRLCIPVPFYHCFGMVMGNLGCTTHGATIVMPAPGFDPGRT 262
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEA+E + VP + +A L + +++ + G P E+MK +
Sbjct: 263 LEAIETERCVGVYGVPTMF--IAMLADPGFAHRDLSTLRTGIMAGSVCPVEVMKRCIDEM 320
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A + AYGMTETS ++ TL+D L+ + VG+ PH
Sbjct: 321 HMAGVAIAYGMTETSP-VSCQTLFDDDLDR-------------------RTATVGRAHPH 360
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ S G + TRG VML YW+ V + W+ TGD+ + +
Sbjct: 361 IEIKIVDPDSGETVQRGQSGELCTRGYSVMLGYWNDEAHTREVLDTDGWMHTGDLAVMRE 420
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G ++GR + GGEN+YP E+E LL HP I + VVG+ + + E + A VR+R
Sbjct: 421 DGYCTIIGRLKDMVIRGGENIYPREIEEFLLTHPDIEDVHVVGVPDEKYGEELCAWVRMR 480
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+++ + +R + L +K PR +V + FP+T TGK+R
Sbjct: 481 PG---------------RVVIDAVAIRAFASGR-LAHYKIPR-YVHVVESFPMTVTGKVR 523
Query: 546 RDEVRREVMS 555
+ E+R++ +
Sbjct: 524 KIEMRQQTIQ 533
>gi|111017438|ref|YP_700410.1| AMP-dependent acyl-CoA synthetase [Rhodococcus jostii RHA1]
gi|110816968|gb|ABG92252.1| AMP-dependent acyl-CoA synthetase [Rhodococcus jostii RHA1]
Length = 513
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 226/509 (44%), Gaps = 55/509 (10%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LARGL G+R GD VA+ LN ILA +G I PLN+R + KE + +
Sbjct: 39 LARGLAARGVRKGDRVAVMMLNRPELAHVILATLKLGAISVPLNFRLTAKELAPMVVDSA 98
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
P +++ ++ S LE+ T + GS+ + D TA ++
Sbjct: 99 PRVVIVEDGFAS-LLEVA-TEQAEFETYAIGGSAHPPYERLIDPGTAPVV---------- 146
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
+ A + IC+TSGTTG KG +I+H + +++ G+ + D L +APL +
Sbjct: 147 --AIAADDPGFICYTSGTTGVQKGALITHRNAMTPGISQSITFGFSQGDRVLCSAPLVYT 204
Query: 225 GGLSSAMAMLMV--GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
G + S L+V GA V + +++ + AL+ E+ +T+ TVP I + L
Sbjct: 205 GSVLSIFMQLVVVPGATMVLLREYDPEIALDTFEREQITATTTVPVIWERMTML----PD 260
Query: 283 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 342
+ R K G GG P L L YG+TE S ++ + Y+ + P
Sbjct: 261 FGTRKLAKFTFAGTGGAPVSLDLLDFYRSHGIPLTQCYGLTEASGMVSTLA-YEDAVSRP 319
Query: 343 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQF 402
G F + H + +G+P + VG IL RG HV+ YW++
Sbjct: 320 G-----FAGLPLVGTH----IRIGEPG-------VDTPAGEVGEILVRGEHVLREYWNKP 363
Query: 403 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 462
A + + G+ WL TGD+G DDGG + +V R + SGG NVYP E+E L G++
Sbjct: 364 EAT-AATVGDGWLRTGDLGMQDDGGFLKIVDRSKDMLISGGLNVYPAEIEKALHGIDGLV 422
Query: 463 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
+ V+G+ + R E V V ++ D + E NL
Sbjct: 423 DLAVIGVKDDRWGE--VPMVVFHSERPAADIVADIAEVAGE---------------NLAK 465
Query: 523 FKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
FK P+ V +P P T +GK+ + +R+
Sbjct: 466 FKRPKHAVALGEPLPRTFSGKLAKPSLRQ 494
>gi|377574787|ref|ZP_09803802.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
gi|377536492|dbj|GAB48967.1| putative fatty-acid--CoA ligase [Mobilicoccus pelagius NBRC 104925]
Length = 543
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 154/557 (27%), Positives = 236/557 (42%), Gaps = 73/557 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R T +F DV LA+GLL +GL GD + I + N Y EW L A
Sbjct: 36 RTALVDVPSGRRWTYTEFGADVNRLAKGLLAVGLEKGDRMGIWSPN---YPEWTLLQYAT 92
Query: 78 AFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAI--PSLRWHV 133
A +G ++ +N + E + + +R + + S + ++ T PSL
Sbjct: 93 AKVGVVLVNVNPAYRTHEFDYVVEQSGMRMIAAAVEYKSSKYRQMVEQTLAKRPSLERAF 152
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH----SWAPEGAVIICFTSGTTGSPKGV 189
+G +S D ++L G S H S P + I +TSGTTG PKG
Sbjct: 153 YIGDASWD----------ELLAGGESISDEQLHERSDSLDPHDPINIQYTSGTTGFPKGA 202
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFE 247
+SH ++ + Y E D+ P H G+ +A GAC V P F+
Sbjct: 203 TLSHRNILNNGFFVGEGLTYTEKDIVCIPMPFYHCFGMVMGNLACTSHGACMVIPGPTFD 262
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+AL AVEQ TSL VP + +A L S++ + G P E MK+
Sbjct: 263 PVAALTAVEQEHCTSLYGVPTMF--IAELGLPNFADFDLSSLRTGIMSGSPCPVEAMKKV 320
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+ A+++ YGMTETS T D + + VG+
Sbjct: 321 IDRMGMAEVVICYGMTETSPVSTITRADDDM--------------------RRRTETVGR 360
Query: 368 PAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PHVE+++ + G TRG VM YW+ + W+ TGD+
Sbjct: 361 AMPHVEIQILDPVTGERVPRGTTGEFCTRGYSVMKGYWNAPERTAEAIDADGWMHTGDLA 420
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA- 480
+D+ G +VGR + GGEN+YP E+E L HP I + VVG+ + + E ++A
Sbjct: 421 VMDEDGYCAIVGRMKDMVIRGGENIYPREIEEFLYTHPAIADVSVVGVPDEKYGEELMAW 480
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ + + + D+ S + L +K PR +V FP+T
Sbjct: 481 IITVPGHEALTAEDLDEFSAGR-----------------LAHYKVPR-YVHCVDSFPMTV 522
Query: 541 TGKIRRDEVRREVMSHL 557
TGKIR+ ++R E + L
Sbjct: 523 TGKIRKVDMRDEAVRLL 539
>gi|373857009|ref|ZP_09599752.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453255|gb|EHP26723.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 503
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 145/549 (26%), Positives = 250/549 (45%), Gaps = 75/549 (13%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
++++ NR T Q+ + LA + G++ G+ +A+ + N Y + + A A IG
Sbjct: 19 DAIIDAKQNRAWTYQEVNLRAVALASWFKKNGVKKGNRIALLSPNHIAYFDILFACAKIG 78
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD 141
I PLN+R S E + PV++ ++ E + LG+
Sbjct: 79 VIFVPLNWRLSNDELKYILLDSSPVLI-------GYHTEYKDKI-------EELGTDIEK 124
Query: 142 FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
D DIL SL L + + E A+ + +T GTTG PKGVV+SH ++ +
Sbjct: 125 TFCINDRGFDDILMQQSL--LDESTEKSEEDALTMIYTGGTTGRPKGVVLSHRNILWNGI 182
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCV 260
+ ++DV L + P+ H GGL+ ++ +L++G V F+ +++ + Q+
Sbjct: 183 NTVLSWNLTKEDVTLTSMPMFHTGGLNVLSIPLLLIGGKVVITDGFDPVQSIQYINQYQC 242
Query: 261 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP---SELMKEATNSFPKAKLI 317
+ +I VP + L + S+K L+GG P E+ K +F +
Sbjct: 243 SIVIFVPTMYHMLFQTEEFANS--TFPSIKSFLSGGSPCPLDIYEVFKRKGIAFREG--- 297
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV- 376
YG+TE + F+ DP + + +G VGKP +K+
Sbjct: 298 --YGLTEAGPNNFFI---DPVI-----------------ADEKRG-SVGKPMLFNSIKLI 334
Query: 377 ----CSDGSSHVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
C ++ VG +L G HV ++YW ++ K ++ G WL TGD+ D+ G ++
Sbjct: 335 NEEGCETEANEVGELLINGKHVFVKYWKNENATKEAIQAG--WLHTGDLAKRDEQGFFYI 392
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
VGR+ I +GGENVYP+EVE L+ HP I + V+G+ + + E V A V ++
Sbjct: 393 VGRKKDMIITGGENVYPQEVEHWLVSHPDIEEVAVIGLPDVKWGEAVTAFVVMK------ 446
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
Q +++EL+ +C E L +K PR F+ P T GKI + ++
Sbjct: 447 ----GQQIQSRELI-------NYC-EFKLGKYKIPRKFIFVEN-LPKTPVGKIDKKRLKE 493
Query: 552 EVMSHLKSL 560
+ ++K++
Sbjct: 494 IGLEYVKNI 502
>gi|296169603|ref|ZP_06851223.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895869|gb|EFG75564.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 467
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 149/534 (27%), Positives = 234/534 (43%), Gaps = 92/534 (17%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF----IGG 82
+ G T + V+ + A +G+ GD VAI A NS EWI+A AF GG
Sbjct: 16 VDGPLRLTFSEAVERIRCAAGAFAGLGIDKGDRVAIWAPNSA---EWIVA-AFGLLTAGG 71
Query: 83 IVAPLNYRWSFKEASRAIT--SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSLGS 137
++ P+N R+ EA IT R VM+ +L ++TA IP +
Sbjct: 72 VLVPVNTRFKADEAGDIITRSKARAVMV------QKGFLGQEYTAPAGIPVID------- 118
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
L +D L G + PF + + + + FTSGTTG PKG +++H +
Sbjct: 119 -----------LKSDFLSGGA----PFERAVSGDDIADVIFTSGTTGRPKGAMMNHRQTL 163
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVE 256
+ E D YL P H GL + + + GA + +P F+ ++ +E
Sbjct: 164 RMYEEWATLADLREGDRYLQVNPYFHTFGLKAGLVTSFLRGATMLPVPVFDVGEVVDLIE 223
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ VT L P + L T+ K S++ + G +P EL++ P L
Sbjct: 224 RERVTMLPGPPTLYHSLLTVPDKAKL----SSLRAGVTGAADIPVELVRRIHGELPFQTL 279
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
++ YG+TE + TL PG +F +V + G P VE+++
Sbjct: 280 MTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GLPCDGVEVRI 318
Query: 377 CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
DG +L RG VM Y D + + WL TGD+G++DD G + +VGR+
Sbjct: 319 ADDGE-----VLVRGYGVMQGYLDDPEGTAAAIDADGWLHTGDLGNLDDAGRLRIVGRKK 373
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
GG N YP E+E L+ HP + V+G+ + RL ++ A V +++
Sbjct: 374 DMFIVGGFNAYPAEIEGFLMHHPAVAQAAVIGVPDERLGQVGKAFVVAKDA--------- 424
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+++E L CRE+ + GFK PR V + PL +TGK+ +D +R
Sbjct: 425 ---------VTAEELIAWCRER-MAGFKVPR-SVEFLDVLPLNATGKVVKDLLR 467
>gi|271965651|ref|YP_003339847.1| acyl-CoA synthetase [Streptosporangium roseum DSM 43021]
gi|270508826|gb|ACZ87104.1| acyl-CoA synthetase [Streptosporangium roseum DSM 43021]
Length = 534
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 151/552 (27%), Positives = 233/552 (42%), Gaps = 64/552 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ L R A + + G T Q +D +A LLE G+R GD VA+ + NS
Sbjct: 20 LADLLRRSARRHPHRLAVSDGASGRTYAQLDEDASRIANALLERGVRPGDRVAVLSRNSV 79
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
Y++ I AVA G ++ P+N+ +E + V L+ + L + AI +
Sbjct: 80 AYVQTIFAVARAGAVLVPINFMLRGEEVGYVVGHSSAVALIAQDE----LLPVAEEAIKA 135
Query: 129 ---LRWHVSLGSSSSD------FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
LR + G ++ D ++ RD ++P AP+G I +T
Sbjct: 136 TDRLRTRIVYGEAAGDWEPFSALLDHRDSREP---------AVPI----APDGPAQILYT 182
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGA 238
SGT PKG V+SH+ALI Q + + G DDV LH+ PL H + + +GA
Sbjct: 183 SGTESRPKGAVLSHAALIAQYGSCVIDGGMDRDDVELHSMPLFHCAQQHCFLVPDIQLGA 242
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
V +P + + L A+E H VT P + +A L + S++K G
Sbjct: 243 SSVILPGPDPAAVLAAIESHRVTKFFAPPTVW--IALLRHPDFDRRDLSSLRKGYYGAAI 300
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
+P E+++E P +L + YG TE + + D + G QA NV V
Sbjct: 301 MPVEVLREIGERLPGVRLWNFYGQTEMAPVAVMLQPED-QIRKAGSAGQAALNVETRVVD 359
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
G+ P + +G I+ R H +L Y D G W +G
Sbjct: 360 -----AEGRDVP----------AGEIGEIVHRSPHAILEYLDDPEKTAEAFRGG-WFHSG 403
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G++D+ G + +V R IK+GGENV EVE + +HP + + VVG+ +
Sbjct: 404 DLGTMDEEGYLTVVDRIKDMIKTGGENVASREVEETIYEHPAVAEVAVVGVRHP------ 457
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
W E+ ++ E LR H RE+ L FK P+ F P
Sbjct: 458 ----------SWIEAVVAIVVAKAGAAVTEEELRAHARER-LAPFKVPKAFAFV-DALPK 505
Query: 539 TSTGKIRRDEVR 550
+GKI + E+R
Sbjct: 506 NPSGKILKRELR 517
>gi|328718816|ref|XP_001945665.2| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Acyrthosiphon pisum]
Length = 595
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 245/567 (43%), Gaps = 65/567 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +V+ N+ T +V L R +GL+ GD V I N Y I+A A +
Sbjct: 66 REFLVSRHENKRYTFAAMDSEVDKLCRSFNAVGLKRGDRVGIWMPNCALYFTAIIATARL 125
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSW-YLELQHTAIPSLRWHVSLGSSS 139
G I+ +N + E +T L+T E + Y E+ P + W+ +
Sbjct: 126 GLILVNINPAYQSDELKHTLTLAEVKCLLTLEKFKTQNYPEILEKVDPDI-WNRPCNTPV 184
Query: 140 SDFVN---KRDMLTAD--ILKGYSLRS---LPFTHSWA-----PEGAVIICFTSGTTGSP 186
V K + ++ I Y+L++ L F +++ P+ II FTSGTTG P
Sbjct: 185 KSKVMPTLKSVIFDSENHINGAYNLQTFLDLGFNSNYSIPNVQPDEGCIIQFTSGTTGKP 244
Query: 187 KGVVISHSAL------IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
K +++H L I++ L + G + + PL H GLS M+
Sbjct: 245 KAALLNHFGLMNNAYSIMKRLGIYDGISKGILHKFCNPMPLFHASGLSIGALGPMITKST 304
Query: 241 VFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
V +P FE K+A++ + + T L P + D+ ++ + +K L+GG
Sbjct: 305 VVLPSAHFEPKAAVDVLTKEKCTILFGTPTVFVDIMSVFENLSPTLQDNDLKFGLSGGAT 364
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
LM + N FP+AK++S +GMTETS P +F + T +S
Sbjct: 365 CSPILMTKFNNMFPRAKILSLFGMTETS-------------------PCSFQSFTDDSDE 405
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ + +G HVE KV + V G +L RG VM Y++
Sbjct: 406 RVKST-MGFIQDHVEAKVVDTNGNMVPFGTPGELLIRGYLVMNGYFNDEEKTKETIDSNG 464
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL TGD + + G VGR I GGEN++P+E+E L HP I + V GI + R
Sbjct: 465 WLHTGDQFVLYEDGYGNHVGRLKEMIIRGGENLFPKEIEYFLESHPSISQVQVYGIPDDR 524
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
+ E V A V ++E +E++ SK K ++ FK P+ + +
Sbjct: 525 MGEEVCASVIVKEGAAVTEADIKAYSKGK-----------------ISHFKIPKYIFIEK 567
Query: 534 KPFPLTSTGKIRRDEVRREVMSHLKSL 560
FP+T+TGK++++ + M + SL
Sbjct: 568 DGFPMTATGKVQKNRLSEIAMQRISSL 594
>gi|52080516|ref|YP_079307.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645522|ref|ZP_07999754.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|404489403|ref|YP_006713509.1| AMP-binding protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423682474|ref|ZP_17657313.1| AMP-binding protein [Bacillus licheniformis WX-02]
gi|52003727|gb|AAU23669.1| AMP-dependent synthetase and ligase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|52348397|gb|AAU41031.1| aceto-acyl-CoA ligase YngI [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392408|gb|EFV73203.1| YngI protein [Bacillus sp. BT1B_CT2]
gi|383439248|gb|EID47023.1| AMP-binding protein [Bacillus licheniformis WX-02]
Length = 545
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 259/584 (44%), Gaps = 66/584 (11%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNR--HNTGQQFVQDVLNLARGLLEIGLRSGD 58
MA I + L + AA + + +R T ++F Q +A+GL+ +G+ G+
Sbjct: 1 MAELLHLTIGKLLEKTAADAPDHEAVVYPDRGLRYTYREFDQLCRKVAKGLMALGIDKGE 60
Query: 59 IVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSW 117
VAI A N+ +L A A G ++ N + E + L+ ES +
Sbjct: 61 HVAIWASNTPEWLTAQFASAKAGAVLVTANTNYQLSELEYVLKQSDATTLILMESYRGTS 120
Query: 118 YLELQHTAIPSLRWHV--SLGSSSSDFVNKRDMLTA----------DILK---GYSLRSL 162
Y+++ IP L+ L S F+ +L D+LK S ++L
Sbjct: 121 YIDILCKLIPELKEGEPGRLASERLPFLKNIILLGDQRHPGMYLWDDLLKLSGSVSEKAL 180
Query: 163 PFTHSWAPEGAVI-ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 221
E VI + +TSGTTG PKGV+++HS L + + + D P
Sbjct: 181 DRRMERLKEHDVINMQYTSGTTGFPKGVMLTHSNLANNAANIAECMNLSKKDRMCIPVPF 240
Query: 222 CH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
H G + +A + GA V + +F K L AVE T+L VP + +A L
Sbjct: 241 FHCFGCVLGTLACVTAGATMVPVQEFSPKEVLSAVETEKCTALHGVPTMF--IAELNDPD 298
Query: 281 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
S++ + G P E+MK+ ++ +++ AYG TE S +T
Sbjct: 299 FASYDLSSLRTGIMAGSNCPIEVMKKVIDNMGMSEITIAYGQTEASPVIT---------- 348
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHV 394
N + + VG+ P+VE+K+ G++ G + TRG HV
Sbjct: 349 ----------QTRVNDSLKRRVETVGRALPNVEVKITEPGTNREVERGVQGELCTRGYHV 398
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
M Y+ A +V + +L TGD+ +D+ G + GR I GGEN+YP E+E
Sbjct: 399 MKGYYKNPEATAAVIDEDGFLHTGDLAVMDEEGYCRITGRLKDMIIRGGENIYPREIEEF 458
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L +HP I+ + +VG+ + E V A ++L+ ++++ L+++
Sbjct: 459 LYKHPDILDVQIVGVPDETFGEEVSAWIKLKSGAS----------------MTADELKEY 502
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
C+ K + +K PR ++ + + FP+T++GK+++ ++R + + H +
Sbjct: 503 CKGK-IARYKIPR-YIAFVEEFPMTASGKVQKFKLREQALEHFQ 544
>gi|407982255|ref|ZP_11162935.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376203|gb|EKF25139.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 523
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 224/489 (45%), Gaps = 51/489 (10%)
Query: 12 CLSRIAAVKR----NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
L+ IA V R ++ I G+R T +F +A+ + G+R GD A NS
Sbjct: 6 SLADIARVHRELRPDAPALIAGDRTVTYAEFDARTSQVAQAMRAAGVRRGDRAAFLDKNS 65
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASR--AITSIRPVMLVTDESSDSWYLELQHTA 125
+ E + +A +G I PLN+R + E ++ A +R V++V E +D L A
Sbjct: 66 IEFFEVMFGLAKLGAIGVPLNWRLAAPELAQILADAGVR-VIVVGAEFADRIEAALDAPA 124
Query: 126 --IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
I ++ V++G D L A R AP+ ++ +TSGTT
Sbjct: 125 DRITTVAAVVAIGEHPRR-PRYDDWLAAHPPTDPGERP-------APDDVAVLAYTSGTT 176
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G+PKGV+++H+ + ++ + + +D V L PL H G AM L VG V +
Sbjct: 177 GTPKGVMLTHTNYLSKARRILGHWRFRDDTVSLAVMPLFHQAGFGWAMIGLYVGCPTVVL 236
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
+ + L+++E+H VT ++ VPA++ L + S++ ++ G + ++
Sbjct: 237 RDVDPVAVLDSIERHRVTGMLVVPAVIQMLLRTPELDSV--DLSSLRTLVYGASPISEDV 294
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+ +A F + + YGMTE++ S+T + D H P G
Sbjct: 295 LVKAMQRF-DCEFLGVYGMTESTGSITQLDGAD---------------------HDPVGR 332
Query: 364 -----CVGKPAPHVELKVCS-DG----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
G+P P VE++V DG VG + TR A M YW+ A + T +
Sbjct: 333 PGLLRSCGRPYPWVEVRVVGPDGRDVPDGEVGELWTRSAQNMAGYWNNPAATAAAITPDG 392
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL TGD G D G ++L R I SG ENVYP EVE VL+ HP + + V+G+ + R
Sbjct: 393 WLRTGDAGRRDADGYLYLYDRVKDMIVSGAENVYPAEVENVLMSHPAVADVAVIGVPDER 452
Query: 474 LTEMVVACV 482
E V A V
Sbjct: 453 WGEAVKAIV 461
>gi|433631621|ref|YP_007265249.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
gi|432163214|emb|CCK60616.1| Putative fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase)
(fatty-acid-CoA synthase) [Mycobacterium canettii CIPT
140070010]
Length = 547
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 242/556 (43%), Gaps = 71/556 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R + + DV LA GL+ G+ GD V I A N W EW+L A
Sbjct: 42 REALVDVVARRRFNYSELLTDVHRLATGLVRAGIGPGDRVGIWAPN-RW--EWVLVQYAT 98
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS 137
A IG I+ +N + +E A+ M++ S + + A+ + +G
Sbjct: 99 AEIGAILVTINPAYRVREVEYALRQSGVAMVIAVAS----FKGADYAAMLA-----EVGP 149
Query: 138 SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPE----GAVIICFTSGTTGSPKGVVI 191
D + + + D L G + LP A V I +TSGTT PKGV +
Sbjct: 150 RCPDLADVVLLESDRWDALAG-AEPDLPALQQTAARLDGSDPVNIQYTSGTTAYPKGVTL 208
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESK 249
SH ++ ++GY D P H G+ +A GA V P F+
Sbjct: 209 SHRNILNNGYLVGELLGYTAQDRICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPGFDPA 268
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AV+ TSL VP + +A L T S++ + G P E+M++ +
Sbjct: 269 ATLRAVQDERCTSLYGVPTMF--IAELGLPDFTDYELGSLRTGIMAGAACPVEVMRKVIS 326
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ YGMTETS P + +SV + G VG+
Sbjct: 327 RMHMPGVSICYGMTETS-------------------PVSTQTRADDSVDRRVGT-VGRVG 366
Query: 370 PHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+KV + VG TRG VM YW+ V + W+ TGD+ +
Sbjct: 367 PHLEIKVVDPATGETVPRGVVGEFCTRGYSVMAGYWNDPQKTAEVIDADGWMHTGDLAEM 426
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G V + GR + GGEN+ P E+E +L HP I+ V+G+ +A+ E ++A V+
Sbjct: 427 DPSGYVRIAGRIKDLVVRGGENISPREIEELLHTHPDIVDGHVIGVPDAKYGEELMAVVK 486
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW-RKPFPLTSTG 542
LR N L+ E LR++C + + FK PR LW FP+T TG
Sbjct: 487 LR---------------NDAPELTIERLREYCMGR-IARFKIPRY--LWIVDEFPMTVTG 528
Query: 543 KIRRDEVRREVMSHLK 558
K+R+ E+R++ + +L+
Sbjct: 529 KVRKVEMRQQALEYLR 544
>gi|433463137|ref|ZP_20420702.1| long-chain-fatty-acid--CoA ligase [Halobacillus sp. BAB-2008]
gi|432187919|gb|ELK45153.1| long-chain-fatty-acid--CoA ligase [Halobacillus sp. BAB-2008]
Length = 518
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/524 (27%), Positives = 239/524 (45%), Gaps = 50/524 (9%)
Query: 41 DVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI 100
+V A L G+ GD V+ N+ + + A IG + P+N+R S +E +
Sbjct: 39 EVNRAANALRASGVEKGDRVSTVLFNTSEFATTLFACMKIGAVFQPVNFRLSEREIRYIL 98
Query: 101 TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLR 160
T P +++ + ++ S + +P++ + VN D L A + +
Sbjct: 99 TDASPKVVLFERATASQVAPIA-ADMPAIEFWSIDEVEQEHAVNYHDRL-ASVTADRPVC 156
Query: 161 SLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAP 220
L +A I +TSGTTGSPKGV+ SH +I Q+L A + ++D L AP
Sbjct: 157 QLDENDPYA------IMYTSGTTGSPKGVIHSHRDMIDQALIMTACLRLTKEDRGLTVAP 210
Query: 221 LCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV 279
+ H L A +M+GA +V + FE++ +E V+Q +T L P + ++
Sbjct: 211 IFHCAELHCAFFPRVMIGAANVIMHHFEAEELIETVKQEQITCLFAAPTM---WNMVLEE 267
Query: 280 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 339
+ + + ++++ L GG + L K ++ +L+ AYGMTE ++T + + + +
Sbjct: 268 EFSAEDFQTLRQGLYGGAPMAPSLTKRLHDAL-GVELLQAYGMTEMGPAITAL-MDEEQV 325
Query: 340 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYW 399
G +A N H + V + P ++C +G I+ RG +M Y+
Sbjct: 326 RKAGSAGRALLN------HDVRVVRTNEHGPAEPNEICK--PFELGEIIVRGPSMMTAYY 377
Query: 400 DQFLAKPSVSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
+ +P T EV W TGDIGS D+ G +W+ R I SGGEN+Y EVE VL
Sbjct: 378 N----RPE-ETEEVLYKGWYHTGDIGSFDEEGYLWVRDRVKDMILSGGENIYSREVEDVL 432
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
HPG++ VVG + E VVA + K +SSE L C
Sbjct: 433 FDHPGVLDAAVVGEPDEMWGERVVAFI-----------------VRKGDPVSSEELDAFC 475
Query: 516 RE-KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
L FK PR +V + P ++GK+++ ++R E + L+
Sbjct: 476 TSGGRLARFKRPRRYVFMEE-LPRNASGKLQKFKLREERTAMLE 518
>gi|386360030|ref|YP_006058275.1| acyl-CoA synthetase [Thermus thermophilus JL-18]
gi|383509057|gb|AFH38489.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Thermus
thermophilus JL-18]
Length = 560
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 153/544 (28%), Positives = 239/544 (43%), Gaps = 89/544 (16%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
A+GL ++G+R GD VAI NS ++ GG+ +N ++ +E +
Sbjct: 64 FAQGLKDLGVRPGDRVAIMLPNSPQFVVAFYGTLLAGGVGVNVNPLYTPRELRHQLADAG 123
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-----------KRDMLT--- 150
LV + YLE++ +P R V+ DF+ KRD L
Sbjct: 124 AETLVILDHLLPRYLEVEKE-VPVKRVVVT---GIKDFLPFPKNLLYPLKAKRDGLPLGF 179
Query: 151 ---------ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
A++LK R H PE ++ +T GTTG KG +++H L+ L
Sbjct: 180 PKREGFHAFAELLK----RPPAEPHVPDPEDLALLQYTGGTTGLSKGAMLTHRNLVANVL 235
Query: 202 AKIA-------IVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALE 253
A +VG G V L P H+ G++ AM L G V +P+ E K+ +E
Sbjct: 236 QIDAWDPTSKDLVGKG---VMLGALPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIKAIVE 292
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
A+E+H VT VP + ++K + S++ L+G LP E+ K
Sbjct: 293 AIEKHQVTHFPGVPTLYVAFNNFPSIEK--RNVKSIRICLSGAAPLPVEVAKR-FEELTG 349
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
A+LI YG++E S +T +P L G + S+ G P P V+
Sbjct: 350 ARLIEGYGLSEASP----VTHSNPVL----------GLIKKGSI--------GMPFPSVD 387
Query: 374 LKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
KV + VG + +G +VM YW++ + + + WL TGD+ +D+ G
Sbjct: 388 AKVVDEEGRELPPGEVGELAVKGPNVMKGYWNR-PEETEKALKDGWLLTGDLAKMDEDGY 446
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
++V R+ I +GG N+YP EVE VL QH + VVG+ + E V A + L+ +
Sbjct: 447 FYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGVPDPYRGETVAAFIVLKPEY 506
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
Q + D + CR+ NL +K PR+ + +R+ P +S GKI R E
Sbjct: 507 QNKVTEKD--------------IETFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRE 550
Query: 549 VRRE 552
+R E
Sbjct: 551 LREE 554
>gi|414068972|ref|ZP_11404968.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. Bsw20308]
gi|410808430|gb|EKS14400.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. Bsw20308]
Length = 577
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/559 (25%), Positives = 248/559 (44%), Gaps = 78/559 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++V LA GLL +G++ G+ V I S N EW L A A IG I+ +N +
Sbjct: 64 TYKEFQKEVNQLAMGLLALGVKPGERVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYR 122
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ S+ L+T + S YLE L A+P+L+ + +
Sbjct: 123 PNELQYALNSVECSTLITASNFKGSDYLEMLNGLAPELATCDKYTLNLKALPTLKNIIRI 182
Query: 136 GSSSS----DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
G +S F + ++ TA + L + E + I FTSGTTG+PKG +
Sbjct: 183 GDEASPGMHSFKDVVNLPTA----AHELELKAIGENLNAEQDINIQFTSGTTGNPKGATL 238
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESK 249
+H ++ +L + + DD PL H + + + P F++K
Sbjct: 239 THKNILNNALFVAESMHFTSDDKLCIPIPLYHCFAMVLGSLLCVSKGAAAIYPGDSFDAK 298
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEA 307
+ L+ V+Q T+L VP + L + D +++ + G P ++M++
Sbjct: 299 TTLDVVQQEGCTALHGVPTMFISELEL----SNFNDYDLSTLRTGVMAGSTCPEQVMRKV 354
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+++ AYG TE S + +T D ++E Q VG+
Sbjct: 355 QTQMNMHQVLIAYGQTE-CSPINNITETDSSIER-------------------QVTTVGR 394
Query: 368 PAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
H E+K+ + + G + ++GA +M YW+ + E WL +GD+G
Sbjct: 395 ALAHTEVKIIDELGNIQKIGQPGEVCSKGAGIMRCYWNDEAKTKATIDDEGWLHSGDLGV 454
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D G V +VGR I GGEN+YP E+E VL +PGI + GI + + E V A +
Sbjct: 455 MDTEGFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDEKYGEEVCAWI 514
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
+ +E + +L + +R ++K L FK PR + + + +P+T TG
Sbjct: 515 QPKE----------------DAVLDEQAIRDFLKDK-LAYFKMPR-HIRFVENYPMTVTG 556
Query: 543 KIRRDEVRREVMSHLKSLP 561
K+++ ++R ++ L P
Sbjct: 557 KLQKFKMREQMQEELSENP 575
>gi|298247014|ref|ZP_06970819.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297549673|gb|EFH83539.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 517
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 239/546 (43%), Gaps = 54/546 (9%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
+ R A + + I G + T + L+ GL+ +GLR GD VA NS +E
Sbjct: 7 IRRGANAYPHRIAVIYGEQRLTFAEVYHHANALSNGLIALGLRKGDRVAFLLANSVQSIE 66
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRW 131
A+ G + PLN R S E + +L ++E ++ +E + ++++
Sbjct: 67 IDFAILQAGLVRVPLNTRLSETEHRHMLQETETKALLFSEEFAER--VEALRPQVTTVQY 124
Query: 132 HVSL-GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
+ G S ++ AD++ G S+ P E I +TSGTTG+ K +
Sbjct: 125 FCQMNGHPHSSWIQS----VADVVTGASIDEPPVL--LREEDYATIQYTSGTTGTLKAAI 178
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKS 250
S + + + + +DD+ LH APL H G + + + GA + +P F+ +
Sbjct: 179 HSQGTWVAIATNILTSLPIEQDDIMLHAAPLTHASG-TLVLPHWLRGAANAILPGFQPEE 237
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L VE+ T+L VP ++ L + RV + +SVK+I+ G +P E+++
Sbjct: 238 YLATVERLRATTLNLVPTMIVMLLSHARVVQY--SLNSVKRIIYGASPMPREVLRRGLEL 295
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ K I YG TE LT + D + P + Q + G+P P
Sbjct: 296 W-GPKFIQYYGQTEAPLILTLLEAQDHLGDDP--------------LRQERLFSCGRPVP 340
Query: 371 HVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ-FLAKPSVSTGEVWLDTGDIGSID 424
V L++ + V G I M+ YW L ++ G W+ T D+G ID
Sbjct: 341 GVALRIVDEDGQEVPQGTIGEITVSTNQAMVGYWKSPELTNATLRNG--WVHTRDMGYID 398
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V+LV R+ I SGG N+YP EVE VL QHP + V+GI + E V A V
Sbjct: 399 EQGYVFLVDRKADMIISGGFNIYPREVEEVLYQHPAVQEAAVIGIPDEIWGESVKAFVVC 458
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ + SE E L C+E+ L +K PR + + + P +TGK+
Sbjct: 459 KPDYPSSE----------------EELIDFCKER-LASYKKPRT-IEFMETLPKNATGKV 500
Query: 545 RRDEVR 550
R +R
Sbjct: 501 VRRVLR 506
>gi|295706985|ref|YP_003600060.1| AMP-binding protein [Bacillus megaterium DSM 319]
gi|294804644|gb|ADF41710.1| AMP-binding enzyme domain protein [Bacillus megaterium DSM 319]
Length = 528
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/550 (26%), Positives = 253/550 (46%), Gaps = 56/550 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ +V+ N T +F Q+ +A+ LL GL+ GD +AI A N +L A A I
Sbjct: 23 QEAVIYSEQNIRYTYAEFYQETSRVAKALLATGLKKGDHIAIWATNVPEWLLLQFAAARI 82
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLEL----QHTAIPSLRWHVSL 135
G ++ LN + E ++ S + DE + Y + +H +P L+ ++L
Sbjct: 83 GAVLVTLNTSYQSSELEYVLSHSDTTALFFIDEFKSTSYTSIITSIEHN-LPKLKHLINL 141
Query: 136 GSSS-----SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
SS ++F+ M++ ++L + S + + +TSGTTG PKGV+
Sbjct: 142 SGSSEHTSWNEFLMSSLMISDEVLDKHE-------QSLHIHDVINMQYTSGTTGFPKGVM 194
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESK 249
+SH ++ + +D P H G + +A + VGA + I +F+
Sbjct: 195 LSHHNIVNNGFLVAQSMKLTNEDRLCIPVPFFHCFGCVLGVLACVSVGATMLPIIEFQPA 254
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
S L VE T+L VP + +A L ++ +++ + G P+E+MK +
Sbjct: 255 SVLRTVENEKCTALHGVPTMF--IAELNALEFNQYDLSTLRTGIMAGSNCPAEVMKRVIH 312
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ AYG TETS +T T PT ++ + Q G V + Q GKPA
Sbjct: 313 DMGINEITIAYGQTETSPVITQTT---PT-DSIERRVQTVGKVHNHVQIQIINPVTGKPA 368
Query: 370 PHVEL-KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
E ++C+ G + +G + M ++ + K WL TGD+ +ID G
Sbjct: 369 SFGEQGELCAKG-----YLTMKGYYKMPEETEKTIVKG-------WLHTGDLATIDKDGY 416
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
V + GR I GGEN+YP E+E L + P + + +VGI + + E V AC++L++
Sbjct: 417 VKITGRLKDMIIRGGENIYPREIEEFLYRIPEVEDVQIVGIPDPKYGERVAACIKLKQHS 476
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
L+++ ++ C+ K L FK P + + FP+T++GKI++ +
Sbjct: 477 ----------------FLTAQEIKDFCKGK-LAHFKIPE-HIYFIDDFPMTASGKIQKYK 518
Query: 549 VRREVMSHLK 558
++ ++++ K
Sbjct: 519 LKEKIVALYK 528
>gi|42521902|ref|NP_967282.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
gi|39574432|emb|CAE77936.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus HD100]
Length = 498
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/526 (28%), Positives = 234/526 (44%), Gaps = 73/526 (13%)
Query: 33 NTGQQF----VQDVLNLARGLL--EIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAP 86
+TG++F D+ N +L + G+ GD VA+ A N Y+ A+ +G I+ P
Sbjct: 23 DTGREFSYAEFFDLANAGAHVLHEKFGICKGDRVAVLATNELEYVFLFFALQRLGAIMVP 82
Query: 87 LNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+N+R + +E + IT P +++ E+ Y ++ +P R ++ G
Sbjct: 83 VNFRLTQREVNHIITDSSPKLVLFQEA----YRDIVEN-LPDTRHYLLQGP--------- 128
Query: 147 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
D D+ + +PF E +I +TSGTTGSPKG ++++ + S+
Sbjct: 129 DSFATDLQNPPAQGEMPFVPK--EEDPAMILYTSGTTGSPKGALLTYKMIFWNSINTTLR 186
Query: 207 VGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLIT 265
+ + D + P H GG + + GA VF+ KF+++ L E+ T L
Sbjct: 187 LNISQTDCTVIFLPFFHTGGWNVLTTPFIHRGAKVVFLKKFDAEQILSLSEKEKATLLFG 246
Query: 266 VPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 325
VP M +A R+ +S++ + GG +P EL+K T + YG+TE
Sbjct: 247 VPTTMEMMARSPRLNDI--NLESIRYAIVGGEPMPLELIK--TWDKKGVPVRQGYGLTEF 302
Query: 326 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----G 380
++ + D L G +G P ++E KV G
Sbjct: 303 GPNVFSLNEED-ALRKIG--------------------SIGFPNFYIEAKVVDPEGRELG 341
Query: 381 SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 440
S+ VG +L RG +M YW A + E WL TGD+ DD G ++VGR+
Sbjct: 342 SNQVGELLLRGPMIMQGYWHNEKATQE-TIKEGWLCTGDLVRRDDEGYYYVVGRKKDMFI 400
Query: 441 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 500
SGGENVYP EVE +L HPG++ V+GI + + E+ A V +R S +
Sbjct: 401 SGGENVYPPEVEQILRSHPGVLEAAVIGIPDDKWGEVGKAFV-VRSSNE----------- 448
Query: 501 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L+ E L QHC + NL FK P+ FV P +GKI +
Sbjct: 449 -----LTPETLHQHCIQ-NLAKFKIPKHFVFLPS-LPKGDSGKILK 487
>gi|116671612|ref|YP_832545.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
gi|116611721|gb|ABK04445.1| AMP-dependent synthetase and ligase [Arthrobacter sp. FB24]
Length = 558
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 155/545 (28%), Positives = 236/545 (43%), Gaps = 71/545 (13%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASR 98
DV LAR L+ G+ +GD + I + N +EW + A A IG I+ +N + E
Sbjct: 56 DDVDRLARALIARGVATGDRIGIWSPNCAEWTI-LQYATAKIGAILVNVNPSYRSHELEF 114
Query: 99 AITSIRPVMLV---TDESSDSWYLELQH-TAIPSLRWHVSLGS------SSSDFVNKRDM 148
+ MLV +D SSD + Q A P L+ V L + D +M
Sbjct: 115 VVKQNGMRMLVAAPSDRSSDYTAMARQALAACPELKELVFLPDGGQPQLQAGDPETAAEM 174
Query: 149 LTADILKGYSLRSLPFTHS--------WAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
A++LK R+ HS P+ + + +TSGTTG PKG ++H ++
Sbjct: 175 TYAELLK----RADDVGHSVLKARLAGLDPQDPINLQYTSGTTGFPKGATLTHRNILNNG 230
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQH 258
+ ++GY E D + P H G+ + IP F +ALEAV+
Sbjct: 231 YSIGELLGYTEHDRVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRTFTPAAALEAVQDF 290
Query: 259 CVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLIS 318
TSL VP + +A L +++ + G P E+M + +
Sbjct: 291 GGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMNRVISDMNMKDVAI 348
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
YGMTETS T MT D TL Q + VG+ P +E +V
Sbjct: 349 CYGMTETSPVST-MTRADDTL-------------------QQRTETVGRTMPQLESQVVD 388
Query: 379 DGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ V G + TRG VM YW+Q + W+ TGD+ +D G V +
Sbjct: 389 PATGEVLERGEIGELCTRGYAVMKGYWNQPDKTAEAIDPDGWMHTGDLARMDADGYVVIE 448
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR + GGEN+YP E+E L HP I + V+G+ +A+ E ++AC+ ++
Sbjct: 449 GRIKDMVIRGGENIYPREIEEFLYTHPSIQDVQVIGVPDAKYGEELMACIIVKPGAD--- 505
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
L + + + CR K L +K PR +V R FP+T +GKIR+ E+R+E
Sbjct: 506 ------------PLDAADVAEFCRGK-LAHYKIPR-YVEVRDSFPMTVSGKIRKVEMRQE 551
Query: 553 VMSHL 557
++ L
Sbjct: 552 AVARL 556
>gi|429215399|ref|ZP_19206561.1| AMP-binding protein [Pseudomonas sp. M1]
gi|428154626|gb|EKX01177.1| AMP-binding protein [Pseudomonas sp. M1]
Length = 556
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 164/573 (28%), Positives = 242/573 (42%), Gaps = 74/573 (12%)
Query: 14 SRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEW 73
SR A R ++V N T Q + V AR L +GLR GD + I A N +
Sbjct: 29 SRFA--DREALVVRHQNLRYTWAQLAEAVNATARAFLALGLRQGDRLGIWAPNCAQWCIT 86
Query: 74 ILAVAFIGGIVAPLNYRWSFKEASRAI---------------TSIRPVML--VTDESSDS 116
A A IG ++ +N + E A+ TS ML + E D
Sbjct: 87 QFASAKIGAVLVNINPAYRANELEYALKQSGCRWLVCADAFKTSDYHGMLAELLPELRDC 146
Query: 117 WYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP---EGA 173
EL +P L VSL + + + D L G S+ + A +
Sbjct: 147 RPGELNSARLPELSGVVSLAAQAPAGFLRWDQLEG---IGASVSAEELAQRQALLQFDEP 203
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MA 232
+ I +TSGTTG PKG +SH ++ +G E D + PL H G+ +
Sbjct: 204 INIQYTSGTTGFPKGATLSHYNILNNGYMVGESIGLTEHDRLVIPVPLYHCFGMVMGNLG 263
Query: 233 MLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
+ GA ++ P FE ++ L AV + T+L VP + +A L ++ S++
Sbjct: 264 CMTHGATMIYPAPSFEPEATLAAVAEERATALYGVPTMF--IAELDHPRRAEFDLSSLRT 321
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+ G P E+M+ N A++ AYGMTETS ++ T D LE
Sbjct: 322 GIMAGATCPIEVMRRVINEMHMAEVQIAYGMTETSP-VSLQTGPDDELEI---------R 371
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAK 405
VT VG+ P +E K+ DG + G + TRG VML YW+ A
Sbjct: 372 VT----------TVGRTQPQLESKII-DGDGRIVPRGTIGELCTRGYSVMLGYWNNPQAT 420
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
+ W+ TGD+ +D+ GNV +VGR I GGEN+YP E+E L H +
Sbjct: 421 AEAISPARWMLTGDLAVMDEAGNVRIVGRSKDMIIRGGENIYPREIEEFLYTHHAVADAQ 480
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V+GI + + E +VA V+ E E LR C+ + + FK
Sbjct: 481 VIGIPDDKYGEELVAWVKFHPGHGVDE----------------EELRAFCKAR-IAHFKV 523
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
PR F + FP+T TGKI++ +R + L+
Sbjct: 524 PRYFRFCDE-FPMTVTGKIQKFRMREISIEELR 555
>gi|262275654|ref|ZP_06053463.1| putative long-chain-fatty-acid-CoA ligase [Grimontia hollisae CIP
101886]
gi|262219462|gb|EEY70778.1| putative long-chain-fatty-acid-CoA ligase [Grimontia hollisae CIP
101886]
Length = 980
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 253/572 (44%), Gaps = 69/572 (12%)
Query: 4 YSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAIS 63
++++++ L+R A + + G + T + +A L E G+++GD VA+S
Sbjct: 451 HAESNLVDALTRFAQQTPDKTAVVCGGKQLTYKDLDLHSNKVANVLREEGIKAGDNVALS 510
Query: 64 ALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ- 122
N ++ + GG+V PLN E + + E ++ +
Sbjct: 511 CPNVPYFPIIYYGILKAGGVVVPLNVLLKESEIAYHLQDSEAKAYFCFEGTEQLPMGQSG 570
Query: 123 ---HTAIPSLR--WHV----SLGSSSSDFVNKRDM--LTADILKGYSLRSLPFTHSWAPE 171
T + + R W + LG S F + ++ ++ +L G P ++ +
Sbjct: 571 VSAFTNVETCRKMWVMPAGDELGLDVSGFQRQTEIVDFSSILLNG---SDEPVANNIEEQ 627
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 231
+I +TSGTTG PKG ++H + + + + DD L T PL H G ++ M
Sbjct: 628 DTAVILYTSGTTGRPKGAQLTHRNMHSNARVAVGLSWLTADDTSLVTLPLFHSFGQTAQM 687
Query: 232 -AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 290
A ++VGA V +P+FE + L+ ++ H V+ VP + + +R D +K
Sbjct: 688 NACILVGASMVLVPRFEPGAVLQLMKDHRVSVFAGVPTMYIGILNYLRDNDV--SLDGIK 745
Query: 291 KIL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
+L +GG LP ++ + +F L+ YG++ETS +F + L PG
Sbjct: 746 GVLKMAMSGGSSLPVAILTQFDETF-NVPLLEGYGLSETSPIASFNHVDSDRL--PG--- 799
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQ 401
VG+P VE+KV + V G I RG +VM Y+++
Sbjct: 800 -----------------SVGQPVTGVEMKVVDVERNTVAVGELGEIAIRGPNVMRGYYNR 842
Query: 402 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
A V + W +GDIG D+ N ++V R+ I GG NVYP E+E VL++H +
Sbjct: 843 PEATDEVLDIDGWFFSGDIGRRDERNNYFIVDRKKELIIRGGMNVYPREIEEVLIRHEKV 902
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
+ V+G+A+ E V A V + + ++ L +C+ + L
Sbjct: 903 AMVAVLGVADDTYGEEVKAYVVAHDGFD-----------------DADALIAYCKSQ-LA 944
Query: 522 GFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+K PR + +R P+T+TGK+ + E++ EV
Sbjct: 945 DYKYPR-HIEFRAQLPMTATGKLLKRELKAEV 975
>gi|209515582|ref|ZP_03264447.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209504049|gb|EEA04040.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 510
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/551 (26%), Positives = 244/551 (44%), Gaps = 58/551 (10%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
+ + R A + + + R T Q + + L E GLR D VAI A+N Y
Sbjct: 6 EMIERNARLHADHTALVYAERRLTHSQLAERARRFSGALYERGLRRQDRVAILAMNCAEY 65
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLR 130
E A + G I+A +N+R + E + P LV E+ + ++ + +P +
Sbjct: 66 YESYRACEWAGFILATVNFRLAPAEILYILKDAAPKALVF-EAQYADVVDGLRSQLPVIE 124
Query: 131 WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
++ +G + V+ ++ A ++G +RS P +++ + +TSGTTG PKGVV
Sbjct: 125 QYICIGDAPDWAVSFESVMEAGPVEGPPIRSNPQDYAY-------LMYTSGTTGRPKGVV 177
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKS 250
+H A+ V + + + + + L T P H+GG+ ++ +G V FE K
Sbjct: 178 RTHHAMCVTAESCALVTEFSGNTRVLQTTPAFHVGGIGFVNSVAWMGGTTVVHRAFEPKQ 237
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
LE + + +T V A++ A L + + S++ I+ +P L+
Sbjct: 238 MLETIAEERITFTFMVAAMLQ--AVLDVPELSSYDVSSIENIVTAAAPVPPPLLSRGIQV 295
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ YGMTE+++ + P E PQ TP V + VG+P P
Sbjct: 296 LGPVFSVQ-YGMTESNAC------WLPAHEVK---PQG----TPEQVRRL--ASVGRPCP 339
Query: 371 HVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIG 421
++L++ D + G + R + YW+ SV+T E W +GD+G
Sbjct: 340 GIDLRIVDDHGNDLPQGQTGEVWLRSETQLSGYWNN-----SVATVEALRDGWYRSGDMG 394
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
D G ++LV R+ I SGGEN+Y EVE L+QHP +I + V+G+ + + E V A
Sbjct: 395 YQDKDGYIFLVDRKKDMIISGGENIYSREVEDALVQHPAVIDVAVIGVPHEKWGECVKAI 454
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V LR Q E+ L + CR + +K P+ + + P T
Sbjct: 455 VVLRRGEQAGEAE----------------LIEFCR-GLIASYKCPKT-IAFVDELPRLPT 496
Query: 542 GKIRRDEVRRE 552
GKI + +R++
Sbjct: 497 GKISKVSLRKQ 507
>gi|345805217|ref|XP_537673.3| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Canis lupus familiaris]
Length = 642
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 154/590 (26%), Positives = 256/590 (43%), Gaps = 91/590 (15%)
Query: 9 ICQCLSRIAAVKRN--SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ QCL A + ++V N T Q ++V A GLL IGL GD + + N
Sbjct: 101 VGQCLEATAQRMPDIEALVIPQENIRVTFAQLQEEVDKAASGLLSIGLCKGDRLGMWGPN 160
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTA 125
S ++ LA A G I+ +N + E A+ + + + Y +
Sbjct: 161 SYAWVLLQLATARAGIILVSVNPAYQAMELEYALKKVGCKALAFPKQFKTQQYYNILKQI 220
Query: 126 IPSLRWHVSLGSSSSD-------FVNKRDMLTADIL---------KGYSLRSLPFTHSW- 168
P L GS S ++ D L +L K L L +T +
Sbjct: 221 CPELE-KAQPGSLKSQRLPELTTVISVDDPLPGTLLLDEVVETGSKEQHLAQLRYTQQFL 279
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH----------- 217
+ + I FTSGTTG+PKG +SH ++ S ++G D + +H
Sbjct: 280 SCHDPINIQFTSGTTGNPKGATLSHYNIVNNS----NLIG---DRLKMHLKPPEEKRMIL 332
Query: 218 TAPLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
+PL H +G + M +M G + P F K ALEA+ + + L P + D+
Sbjct: 333 PSPLYHCLGSVGGTMVSVMYGTTLILSSPTFNGKKALEAISKERGSFLYGTPTMFVDILN 392
Query: 276 LIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
+ + D +++ + G P EL++ + L+ AYG TE +S +TFM
Sbjct: 393 ----QPDFSSYDISTIRGGVIAGSPAPPELIRTIIDKLNMKDLVVAYGTTE-NSPVTFMN 447
Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRI 387
+ T+E + VG+ PH E ++ + + ++ G +
Sbjct: 448 FEEDTVEQKAE-------------------TVGRILPHTEAQIVNMKTGNLVELNTPGEL 488
Query: 388 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
RG VML YW + + W TGDI +ID G +VGR I GGEN+Y
Sbjct: 489 FIRGYCVMLGYWGEPEKTKEAIGPDKWYRTGDIAAIDKQGFCKIVGRSKDMIIRGGENIY 548
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 507
P E+E +HP ++ + VVG+ +AR+ E + AC+RL++ + +E
Sbjct: 549 PAELEDFFHKHPQVLEVQVVGVKDARMGEEICACIRLKKGEKTTE--------------- 593
Query: 508 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E ++ C+ K ++ FK PR ++++ +PLT +GKI++ ++R ++ HL
Sbjct: 594 -EEIKAFCKGK-ISHFKIPR-YIVFVTDYPLTVSGKIQKFKLREQMEQHL 640
>gi|441509013|ref|ZP_20990935.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441447018|dbj|GAC48896.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 547
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 247/569 (43%), Gaps = 68/569 (11%)
Query: 9 ICQCLSRIA-AVKRN-SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L+R A N ++V R T ++F +VL LA GLL G+ GD + + A N
Sbjct: 24 IGQTLARTTQAYGENLALVDAPSGRTWTYREFRTEVLALAAGLLRHGVGKGDRIGLWAPN 83
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWY---L 119
EW++ A A IG I+ LN + E A+ S ++L + DS Y L
Sbjct: 84 RP---EWVITQYATAEIGAILVNLNPAYRQNELDYALNQSGTSMVLAAERYKDSDYKGML 140
Query: 120 ELQHTAIPSLRWHVSLGSSSSD--FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
+ P LR + + D + D A + +G S + P+ + I
Sbjct: 141 DAARPTAPQLREVICFDTPEWDELLTHPSDDELAAVAQGAS--------TLHPDDPINIQ 192
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMV 236
+TSGTTG PKG ++HS + ++ Y E D P H G + +A
Sbjct: 193 YTSGTTGFPKGATLTHSNISNNGYLVGELLAYTESDRIAIPVPFYHCFGMVMGNLAATSH 252
Query: 237 GACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILN 294
GA V P F+ ++AL AV + TSL VP + +A+LA L + S++ +
Sbjct: 253 GAAMVIPSPTFDPEAALRAVADYRCTSLYGVPTMFIAELALLDHAEPDQFDLSSLRTGIM 312
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G P +M++ ++ YGMTETS ++ T D LE
Sbjct: 313 AGSPCPEHVMRQVVERMHMGEVSICYGMTETSP-VSCQTRVDDPLEL------------- 358
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSV 408
+ VG+ PH+E+KV + G TRG VM YW++
Sbjct: 359 ------RVGTVGRVGPHLEIKVIDPITGDTLPRGETGEFCTRGYSVMDGYWNEPEKTAEA 412
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ W+ TGD+ +D V + GR + GGEN+YP E+E L HP I+ V+G
Sbjct: 413 LDADGWMHTGDLAVMDPNSYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIG 472
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + R E ++A V+LR+ D ++ + + ++ R K PR
Sbjct: 473 VPDERYGEELMAWVQLRDGV------ADLTADDIREFATGKIARH----------KIPR- 515
Query: 529 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+V K FP+T TGK+R+ +R E + L
Sbjct: 516 YVHVVKEFPMTVTGKVRKVAMREESVDLL 544
>gi|424851538|ref|ZP_18275935.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
gi|356666203|gb|EHI46274.1| dicarboxylate-CoA ligase PimA [Rhodococcus opacus PD630]
Length = 546
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 159/550 (28%), Positives = 245/550 (44%), Gaps = 60/550 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R+++V R T + +DV +A GLL+ G+ GD V I A N EW L A A
Sbjct: 37 RDALVDRPSGRRWTYAELRRDVDAVAVGLLKRGIGKGDRVGIWAPNCPEWTL-IQFATAK 95
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHVSL 135
IG ++ +N + E + +LV+ +SSD + +E P L V L
Sbjct: 96 IGAVLVNINPAYRAHELKYVLDQAGIRLLVSAPEFKSSDYAGMIEEVRPQCPDLEMVVLL 155
Query: 136 GSSS-SDFVNKRDMLTADILKGYSLRSLPFTHS-WAPEGAVIICFTSGTTGSPKGVVISH 193
GS+ S + + + A SL LP + + + + I +TSGTTG PKG +SH
Sbjct: 156 GSAEWSKLASDGNAVHA---ADPSL--LPAAQAALSSDDPINIQYTSGTTGFPKGATLSH 210
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESKSA 251
++ + Y E+D P H G+ +A GA V P F+ K+
Sbjct: 211 HNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACTSHGATMVIPGPSFDPKAT 270
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L+AVE TSL VP + +A L S++ + G P E+MK+
Sbjct: 271 LQAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEVMKQVIEQM 328
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A++ YGMTETS ++ T D T++ + VG+ PH
Sbjct: 329 GMAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVSTVGRVGPH 368
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + G + TRG VML YW+ W+ TGDIG +D
Sbjct: 369 LEVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTGDIGVMDS 428
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++ VR++
Sbjct: 429 DGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMK 488
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ + L + +R+ C K L +K P+ +V FP+T TGK+R
Sbjct: 489 DGAE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFPMTVTGKVR 531
Query: 546 RDEVRREVMS 555
+ E+R + +
Sbjct: 532 KVEMREQSLD 541
>gi|345010053|ref|YP_004812407.1| AMP-dependent synthetase/ligase [Streptomyces violaceusniger Tu
4113]
gi|344036402|gb|AEM82127.1| AMP-dependent synthetase and ligase [Streptomyces violaceusniger Tu
4113]
Length = 574
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 162/560 (28%), Positives = 242/560 (43%), Gaps = 71/560 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + R T +F + V +A GL+ G+ GD V I A+N EW+L A
Sbjct: 44 REALVDVPSGRRWTYAEFGRSVEEVALGLMAKGVAKGDRVGIWAINCP---EWVLLQYAT 100
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD-ESSDSWY---LELQHTAIPSLRWHV 133
A IG I+ +N + E + +LV+ E S Y +E +A SLR +
Sbjct: 101 ARIGAIMVNINPAYRVHELRYVLQQAGISVLVSSIEHKTSDYRRMVEQVRSACSSLRDVI 160
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGAVIICFTSGTTGSPKGVVIS 192
+G + D + + G + L + + + AV I +TSGTTG PKG +S
Sbjct: 161 YIGDRTWDGLVRAG-------AGVAPERLAEREALISCDDAVNIQYTSGTTGFPKGATLS 213
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK--FESK 249
H ++ V Y +D P H G+ +A GAC V IP F+
Sbjct: 214 HHNILNNGFFVGETVRYTAEDRICVPVPFYHCFGMVMGNLAATSHGAC-VVIPAGTFDPV 272
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AVE+ TSL VP + +A L S++ + G P E+M+
Sbjct: 273 ATLAAVERERCTSLYGVPTMF--IAELALPDFATFDLSSLRTGIMAGSPCPVEVMRRVVA 330
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
A++ YGMTETS P+ + VG+
Sbjct: 331 EMHMAEVSICYGMTETSP--------------------VSAQTRPDDDLVRRTSTVGRVL 370
Query: 370 PHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
PH+E+K+ + G + TRG VML YW + W+ TGD+ +
Sbjct: 371 PHIEVKIVDPVTGATVPRGTRGELCTRGYSVMLGYWQEPERTAEAIDSARWMHTGDLAVM 430
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G V +VGR I GGENVYP E+E L HP + + VVG+ + + E V+ACV
Sbjct: 431 DGEGYVQIVGRIKDMIVRGGENVYPREIEEFLHTHPKVADVQVVGVPDEKYGEEVLACVI 490
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
LRE + L+ + L + CR + L +K PR L FP+T +GK
Sbjct: 491 LREGAK---------------TLTRDELARFCRGR-LAHYKVPRYLRLM-DGFPMTVSGK 533
Query: 544 IRRDEVR----REVMSHLKS 559
+R+ E+R RE++ +S
Sbjct: 534 VRKVELREAAARELLPETRS 553
>gi|357632178|ref|ZP_09130056.1| Long-chain-fatty-acid--CoA ligase [Desulfovibrio sp. FW1012B]
gi|357580732|gb|EHJ46065.1| Long-chain-fatty-acid--CoA ligase [Desulfovibrio sp. FW1012B]
Length = 557
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 250/556 (44%), Gaps = 68/556 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+++VV + + T +QF + LA+GL+ +G++ G+ VA+ A N +++ + A A +
Sbjct: 32 QDAVVYVDRDYRLTWRQFDELTDELAKGLMALGIQKGEKVAVWATNVPFWVALMFATAKM 91
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G + +N + E +T S + + + DS Y+E+ + P LR S
Sbjct: 92 GAWLLTVNTAYKRNELKYLMTNSDAENIFIINGFRDSDYIEILYDLAPELRTMQRGAVKS 151
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWA---------PEGAVIIC-------FTSGTT 183
F + + + + K + S+P A A C +TSGTT
Sbjct: 152 ETFPHLKRVCFLGVEKHRGMYSIPEILGLARTVSDEDLRARQATFTCHDVVNMQYTSGTT 211
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF 242
G PKGV++SH ++ + + E D PL H G + + MA + G VF
Sbjct: 212 GFPKGVMLSHHNIVNNGYSIGQRQRFTEKDKLCIQVPLFHCFGCVLAVMACVNHGTTMVF 271
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
F ++ ++EQ T++ VP + + K + D S++ + G P
Sbjct: 272 TEVFNPVHSMMSIEQEQCTAIYGVPTMFIAMLE----HKLFPKFDFSSLRTGIMAGAVCP 327
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+ M++ T ++ S YG+TE+S +T + DP ++
Sbjct: 328 IQTMRQVTEKMYMKEITSVYGLTESSPGMTQTDVTDPFH------------------YRV 369
Query: 361 QGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+GV G+ PHVE+KV + G + RG + M Y++ A + W
Sbjct: 370 EGV--GRAFPHVEVKVADPETGAEVERGKQGELCCRGYNSMKGYYNNPEATAKCIDADGW 427
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L +GD+G +D+ G V + GR I GGEN+YP E+E L PGI + V G+ + +
Sbjct: 428 LHSGDLGVMDEYGYVAITGRIKDMIIRGGENIYPREIEEYLYTMPGIADVQVAGVPSRKY 487
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A + LR K++ ++ E +R +CR + + K P+ ++ + K
Sbjct: 488 GEEVGAFIILR----------------KDVEMAPEEVRDYCRGQ-IAWHKIPK-YIAFVK 529
Query: 535 PFPLTSTGKIRRDEVR 550
FPLT++GK+++ ++R
Sbjct: 530 EFPLTTSGKVQKYKLR 545
>gi|295706972|ref|YP_003600047.1| o-succinylbenzoate--CoA ligase [Bacillus megaterium DSM 319]
gi|294804631|gb|ADF41697.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium DSM 319]
Length = 487
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/560 (26%), Positives = 252/560 (45%), Gaps = 83/560 (14%)
Query: 5 SQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISA 64
S I L + A + N V T T Q+ + V +A+ L G++ D +A+
Sbjct: 2 SSQTIPNGLMQRAYLTPNRVAVETSQTSLTFQELHKRVQKVAQQLSFNGVKQDDTIALYM 61
Query: 65 LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT 124
N ++E + AV++IG + +N R + +E + +T +L+ DE+ +L
Sbjct: 62 KNRVEFIEILHAVSYIGARLLLVNTRLTNEEINYQLTDANVSLLIADET----FL----- 112
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
+F + LT LK F W E I +TSGTTG
Sbjct: 113 --------------MREFQSSITQLTLPALKSSPEAETDFQKMWNLEETFTIMYTSGTTG 158
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV+ ++ S+ +G E D +L PL HI GLS M + G +
Sbjct: 159 HPKGVLQTYGNHWWSSVGSALNLGLNEKDCWLIAVPLFHISGLSILMRSVFYGMKIILEE 218
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
+FE+++ EA+E VT + V ++++++ + +K + + +L GGG P ++
Sbjct: 219 RFEARAVNEAIENKEVTVISVVTSMLSNMLDELGGRKY---PHTFRCMLLGGGPAPLTIL 275
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+ N + + YGMTETSS F+TL +P + G+
Sbjct: 276 EACVNK--EIPVYQTYGMTETSSQ--FVTL------SPEDSLRKLGSA------------ 313
Query: 365 VGKPAPHVELKVCSDG---SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
GKP +K+ + +S G I+ +G +V Y L KP + + W TG
Sbjct: 314 -GKPLFPCAMKIVDEKGNETSEAGEIIVKGPNVTKGY----LNKPEATEKALQQGWFYTG 368
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIG +D+ G ++++ RR+ I SGGENVYP E+E VLL+HP + V G+A+ + ++
Sbjct: 369 DIGKVDEEGFLYVLDRRSDLIISGGENVYPAEIENVLLKHPAVKEAGVTGVADEKWGQVP 428
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
AC+ + E +S E L H ++ L +K P+ FV + P
Sbjct: 429 AACIVVNED------------------VSDEELSLHI-QQFLAKYKLPKYFVRVEE-LPR 468
Query: 539 TSTGKIRRDEVRREVMSHLK 558
T++ KI +RR++ S ++
Sbjct: 469 TASNKI----IRRKLSSFIQ 484
>gi|148550573|ref|YP_001260012.1| AMP-binding protein [Sphingomonas wittichii RW1]
gi|148502992|gb|ABQ71245.1| AMP-dependent synthetase and ligase [Sphingomonas wittichii RW1]
Length = 518
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 245/537 (45%), Gaps = 61/537 (11%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
Q+ ++ +A GLL+ G+R GD V I A N + A A IG I+ +N + E
Sbjct: 24 QELNREAERVACGLLDHGVRRGDRVGIWAPNCAEWTVIQFATAKIGAILVNINPAYRVSE 83
Query: 96 ASRAITSIRPVMLVTDES-SDSWYL----ELQHTAIPSLRWHVSLGSSSSD-FVNKRDM- 148
A+ + +LVT + S Y+ E+ ++P LR +SLG + D F+ +
Sbjct: 84 IEYALAKVGCSVLVTASAFKSSNYIAMLREIGTRSLPDLRLVISLGEQAHDGFIPWEQLR 143
Query: 149 LTAD-ILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 207
++AD +L G + SL P+ A+ I FTSGTTG PKG ++H ++ +
Sbjct: 144 VSADPLLLGAASESL------RPDDAINIQFTSGTTGFPKGATLTHRNILNNGYFSGQTI 197
Query: 208 GYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLIT 265
D PL H G+ +A + GA ++ + ++++ LEAV T+L
Sbjct: 198 NLTVKDRICIPVPLYHCFGMVLGNLASVTSGAAMIYPGEAYDARMTLEAVRDERCTALYG 257
Query: 266 VPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 325
VP ++ + L S++ + G P+ +M++ + ++ YGMTET
Sbjct: 258 VPTML--ITILNHPDLDQFDVSSLRTGIMAGAPCPAAMMEQIMDRLNMREVTIGYGMTET 315
Query: 326 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS-- 382
S T ++ DP E + VG+ PH E K+ +G +
Sbjct: 316 SPLTTQTSIDDPVAE--------------------RVATVGRVHPHAEAKIVGLNGETLQ 355
Query: 383 --HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 440
G +RG VM YW+ E W+ +GD+ +D+ G V + GR I
Sbjct: 356 VNQQGEYCSRGYAVMQGYWNDPEKTDDAIDAEGWMHSGDLAVMDERGYVRITGRIKDMII 415
Query: 441 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 500
GGEN+YP E+E LL HP I+ + V G+++A+ E V A V R +
Sbjct: 416 RGGENIYPRELEEFLLGHPLIVDVQVFGVSDAKFGEEVCAWVIARAGHR----------- 464
Query: 501 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
LS++ + HCR K + +K PR +V + F +T TGK ++ E+R+ + + L
Sbjct: 465 -----LSADDVIAHCRGK-IAHYKVPR-YVRIVEGFAMTVTGKAQKFEMRKTMEAEL 514
>gi|398997749|ref|ZP_10700562.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
gi|398123277|gb|EJM12839.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM21]
Length = 538
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/529 (27%), Positives = 232/529 (43%), Gaps = 54/529 (10%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI---GGIVAPLNYRWSF 93
Q + V+ ARGL+ +G+++GD V I A NS +WILA I G ++ P+N R
Sbjct: 46 QLPERVMGFARGLMALGIQAGDRVGIWAPNSG---DWILAALGIQCAGAVLVPINTRMKG 102
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL-----GSSSSDFVNKRD 147
EA+ + S ++ V D Y L P+ H+ + S++D +
Sbjct: 103 LEAADVLERSGCRLLFVPQRFLDVDYPALLAPHRPASLQHLVILDGDTPGSAADLTLAQF 162
Query: 148 MLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIV 207
+ A + S R + PE + FTSGTTG PKGV+ H + + ++
Sbjct: 163 LSGAATIDADSARHRAL--AVDPEAMCDLLFTSGTTGKPKGVMSGHGQNLRAFTEYVKVI 220
Query: 208 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLIT 265
G D YL P H G + ++G + +P F+++ + + + ++ L
Sbjct: 221 GLVPGDRYLIVNPFFHAFGYKAGWLTCLIGGATI-LPHSVFDAEQVFQRIARERISVLPG 279
Query: 266 VPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 325
P + L R+K+T S++ + G +P L++ N A + +AYG+TE
Sbjct: 280 APTLYLSLLAHPRLKQT--DLSSLRIAVTGSASIPPSLIERMRNELGFAVVTTAYGLTEC 337
Query: 326 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP-QGVCVGKPAPHVELKVCSDGSSHV 384
T+ DP Q V + +P G V PH + + +
Sbjct: 338 GG---LATICDP---------QDSAQVIAGTSGRPIAGTEVSIRDPHNQ----ALDAGLT 381
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 444
G I RG H+M Y+ A GE WL TGD+G +D+ GN+ + R GG
Sbjct: 382 GEICLRGFHIMQGYFQDPEATREAIDGEGWLHTGDVGRLDEAGNLIITDRLKDMFIVGGF 441
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 504
N YP E+EA L++HP I + V+GIA+ R+ E+ ACV LRE + E+ S+ +
Sbjct: 442 NCYPAEIEAALIRHPAIAQVAVIGIADERMGEVGCACVVLREGAEVGEAQLIAWSREQ-- 499
Query: 505 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ +K PR V + PL + K+ ++E+R V
Sbjct: 500 ---------------MANYKVPRQ-VRFFSALPLNPSSKVAKNELRSMV 532
>gi|196036763|ref|ZP_03104154.1| putative feruloyl-CoA synthetase [Bacillus cereus W]
gi|228945573|ref|ZP_04107923.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|195990646|gb|EDX54623.1| putative feruloyl-CoA synthetase [Bacillus cereus W]
gi|228814091|gb|EEM60362.1| Feruloyl-CoA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
Length = 496
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 248/553 (44%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A + E+ + G+ +AI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYFICELHVEKGERIAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ Y+ L + ++
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQ--YMALSMQKVSYVQR 125
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+S+ S LK R + + IIC+TSGTTG PKG V+
Sbjct: 126 VISITS----------------LKEIEDRKIDNFVEINESASFIICYTSGTTGKPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTK 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
+ ++ + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGDLARV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A +
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L+ +V+ +HCR L +K P+ +++ K P +TGK
Sbjct: 441 --------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLVNQLKSR 496
>gi|23099672|ref|NP_693138.1| AMP-binding protein [Oceanobacillus iheyensis HTE831]
gi|22777902|dbj|BAC14173.1| long-chain fatty-acid-CoA ligase [Oceanobacillus iheyensis HTE831]
Length = 547
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/556 (24%), Positives = 243/556 (43%), Gaps = 78/556 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T ++F Q +ARG++ + + G+ VA+ N+ +L A +G ++ +N +
Sbjct: 36 TYKEFNQLCEKVARGIMALSIDKGEHVAVWGTNTPEWLTLQYATGKMGAVLVTVNTSYRA 95
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYL----------------ELQHTAIPSLRWHVSLG 136
E + S + + + D Y+ EL +PSL+ V +G
Sbjct: 96 NELEYLLKQSDSTTIFLIENYRDHSYIDTLYEICPELHESIPGELNAERLPSLKNVVIMG 155
Query: 137 SSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGV 189
+D ++K + ++ + L S + P + + +TSGTTG PKGV
Sbjct: 156 EKRYPGAFHWNDIIDKAEEISREELIFQS-------QNLDPNDVINMQYTSGTTGFPKGV 208
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFES 248
+++H L + +D P H G + +A + VGA + I +FE
Sbjct: 209 MLTHRNLTNNGFNIANCMKLTAEDRLCIPVPFFHCFGCVIGTLAAVSVGATMIPIQEFEP 268
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
+ L+ VEQ VT+L VP + +A L S++ + G P E+MK
Sbjct: 269 EQVLKTVEQESVTALHGVPTMF--IAELNHPNFERYNLSSLRTGVMAGSNCPVEVMKNVM 326
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
N +++ YG TE+S +T DP + + VGK
Sbjct: 327 NKMNMSEITICYGQTESSPVITQTRANDPI--------------------ELRVESVGKA 366
Query: 369 APHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
P+VE+K+ ++ G + TRG HVM Y+ A + WL TGD+
Sbjct: 367 LPNVEVKIIDPATNEELPHYTQGELCTRGYHVMKGYYKNPEATQRTIDEDGWLHTGDLAI 426
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+DD G + GR I GGEN+YP E+E +L +HP I+ VVG+ + + E V A +
Sbjct: 427 MDDNGYCKITGRLKDMIIRGGENIYPREIEELLYKHPKILDAQVVGVPDEKFGEEVHAWI 486
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
L+E + SS+ ++Q C + ++ +K P+ + +P+T++G
Sbjct: 487 ILKEGE----------------ISSSDEIKQFCNGQ-ISKYKIPK-HIFITDAYPMTASG 528
Query: 543 KIRRDEVRREVMSHLK 558
KI++ ++R + ++ ++
Sbjct: 529 KIQKFKLREKSLNEVE 544
>gi|296139574|ref|YP_003646817.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296027708|gb|ADG78478.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 506
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/553 (27%), Positives = 246/553 (44%), Gaps = 63/553 (11%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ L AA + + G+R + ++ +A LL GL GD VA+ N
Sbjct: 4 NLAIMLRESAAATPEAPLLFAGDRVLSYREVDDCSGRVASALLARGLVPGDKVAVQLPNL 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
++ V G + PLN ++ +E + L+T +SS A
Sbjct: 64 PEFVMAYFGVLKAGLTMVPLNPLFTAREVEYHLGDSDSRALITSDSSAEAAGAGAAAAGV 123
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
VS +S + + +D+L + H A + ++ +TSGTTG PK
Sbjct: 124 DDVLVVSENAS----IPRGATAFSDLLATAGSGEI---HPTASDDTAVLLYTSGTTGRPK 176
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKF 246
G ++H L + + G DV L PL H+ GLSS + A + G +P+F
Sbjct: 177 GAELTHFELYMNCTVAPQLFGMTAADVALGVLPLFHVFGLSSVLNAAVRYGGSVALVPRF 236
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELM 304
E+ + L+ +E+ VT L VP + L + GRD +++ ++GG +P ++
Sbjct: 237 EAAAVLDVMERRRVTVLSGVPTMYVAL-----LGAGPGGRDLSALRAAVSGGASIPGGVL 291
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+ +F ++ YG++ET+S+ TF N+ S Q + +
Sbjct: 292 RGFEEAFGGIAVLEGYGLSETASTATF-------------------NI---SADQRKVLS 329
Query: 365 VGKPAPHVELKVCSD-------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
+GKP V++++ G +HVG +L RG +VM Y+ + A + + + WL T
Sbjct: 330 IGKPIWGVQMRIVDPDGVELPPGDAHVGEVLVRGHNVMKGYYKRPEAT-AEALRDGWLHT 388
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G D+ G ++V R + GG NVYP E+E VL HP ++ VVG + RL E
Sbjct: 389 GDLGYRDEDGYFFIVDRLKDLVIRGGYNVYPREIEEVLYTHPDVVEAAVVGRPDERLGEE 448
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V LR S D +E L RE+ L +K PR FV+ + P
Sbjct: 449 VEAFVVLRPG-----SATD-----------TEALTAFARER-LAAYKYPRSFVILPE-LP 490
Query: 538 LTSTGKIRRDEVR 550
+TGKI + E+R
Sbjct: 491 KGATGKILKRELR 503
>gi|315224019|ref|ZP_07865860.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|420159021|ref|ZP_14665831.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
gi|314945990|gb|EFS97998.1| AMP-binding enzyme [Capnocytophaga ochracea F0287]
gi|394762888|gb|EJF45063.1| AMP-binding enzyme [Capnocytophaga ochracea str. Holt 25]
Length = 542
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/548 (26%), Positives = 239/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ + T +F + + +A+GL+ +G++ GD V I + N EW L A
Sbjct: 35 KEALISVHQDYRVTYTEFYKQITTVAKGLIALGVKQGDRVGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + + S Y ++ A +LR V
Sbjct: 92 AKIGAIMVNINPAYRTSELIYVINQSGISYIFAAPQFKSSNYKKMIDDAREFTETLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G S F+ + + +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGESWQHFLVRGEKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + Y E D P H G+ + IP F++
Sbjct: 205 HNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNIACTTHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS P G +H VG H
Sbjct: 323 NMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----VGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 363 LEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATEQVIDEQRWMHSGDLAMMDE 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVMAWIKPK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E + LS E L C+ + + +K PR W+ + FP+T +GK
Sbjct: 483 EG----------------VTLSEEELHDFCKGR-IAHYKVPR---YWKFVEEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|220913513|ref|YP_002488822.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
gi|219860391|gb|ACL40733.1| AMP-dependent synthetase and ligase [Arthrobacter chlorophenolicus
A6]
Length = 558
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 235/545 (43%), Gaps = 71/545 (13%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASR 98
DV LAR LL +G+ G+ V I + N +EW L A A G I+ +N + E
Sbjct: 56 DDVDRLARALLALGVAKGERVGIWSPNCAEWTL-LQYATAKAGAILVNVNPAYRSHELEF 114
Query: 99 AITSIRPVMLVT---DESSDSWYLELQHTA-IPSLRWHVSL---GSSSSDFVN---KRDM 148
+ LVT D +SD + Q A P LR V L G D V+ ++
Sbjct: 115 VVKQNGMRTLVTAPPDTNSDYVGMARQALAGCPELRELVFLPVPGGDVDDAVSPLSDAEL 174
Query: 149 LTADILKGYSLRSLPFTHS--------WAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
A++LK R+ HS P V + +TSGTTG PKG ++H ++
Sbjct: 175 TYAELLK----RADAVGHSALKARMAELDPHDPVNLQYTSGTTGFPKGATLTHHNILNNG 230
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQH 258
A ++GY E D + P H G+ + IP F +ALEAV+
Sbjct: 231 FAIGELLGYTEHDRVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFSPAAALEAVQDF 290
Query: 259 CVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLIS 318
TSL VP + +A L +++ + G P E+M +
Sbjct: 291 GGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMNHVIADMNMTDVAI 348
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
YGMTETS T MT TL+ H+ + VG+ PH+E K+
Sbjct: 349 CYGMTETSPVST-MTRKGDTLQ-----------------HRTE--TVGRTMPHLESKIVD 388
Query: 379 DGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
S V G + TRG VM YW+Q E W+ TGD+ +D G V +
Sbjct: 389 PVSGDVAERGEIGELCTRGYAVMDGYWNQPEKTAEAIDAEGWMHTGDLARMDADGYVLVE 448
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR + GGEN+YP E+E L HP + + V+G+ + + E ++AC+ L+ +
Sbjct: 449 GRIKDMVIRGGENIYPREIEEFLYTHPAVQDVQVIGVPDEKYGEELMACIILKPGAE--- 505
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
L + + CR K L +K PR +V R FP+T +GKIR+ E+R+E
Sbjct: 506 ------------PLDAAAVADFCRGK-LAHYKVPR-YVEIRSSFPMTVSGKIRKVEMRQE 551
Query: 553 VMSHL 557
++ L
Sbjct: 552 AVARL 556
>gi|395005400|ref|ZP_10389282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394316643|gb|EJE53356.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 564
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 242/549 (44%), Gaps = 73/549 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T + ++V +A LL +GL GD + I + N+ +L A A G I+ +N +
Sbjct: 49 TYAELQREVNRMASALLRMGLEPGDRIGIWSHNNVEWLVTQFATAKAGVILVNINPAYRV 108
Query: 94 KEASRAITSIRP---VMLVTDESSDSWYLE----------------LQHTAIPSLRWHVS 134
E A+ + +M+ T +++D YLE L+ +PSL+ V
Sbjct: 109 AELEYALNKVECKALIMMPTFKTTD--YLEMIRCIAHEVSHAVPGRLESARLPSLKTVVQ 166
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+GS + F+ D+L ++ SL A+ I FTSGTTGSPKG ++H
Sbjct: 167 IGSDTVPGFMRFSDLLAMGDPADQAVHSL--GARLRNTDAINIQFTSGTTGSPKGATLTH 224
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESKSA 251
++ + DD PL H G+ +A L GA V+ FE S
Sbjct: 225 RNVLNNGFFIGEAMRLSPDDRLCIPVPLYHCFGMVVGNLAALTHGATIVYPNDAFEPVSV 284
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV+ T+L VP + +A L + +++ + G P E+MK +
Sbjct: 285 LRAVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTLRTGVMAGSPCPIEVMKRVVSEM 342
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ AYGMTETS + T +TP + + +GK PH
Sbjct: 343 HMGEVTIAYGMTETSPASC-----QSTTDTP---------------LEKRVSTIGKVLPH 382
Query: 372 VELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+ELKV + S VG + TRG VM YW+ E W+ +GD+ +ID
Sbjct: 383 LELKVIAPESGEILPVGAVGELCTRGYSVMRGYWEDAAKTSEAIDAEGWMHSGDLATIDG 442
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR + GGENVYP EVE L +H I + V+G+ + + E + A V LR
Sbjct: 443 NGYVNIAGRIKDLVIRGGENVYPREVEEFLYRHSAIQDVQVIGVPDQKYGEELCAWVVLR 502
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ SE LR CR + + +K PR ++ + + FP+T TGKI+
Sbjct: 503 DGATLSEDE----------------LRSFCRGQ-IAHYKIPR-YIRFVESFPMTVTGKIQ 544
Query: 546 RDEVRREVM 554
+ V RE+M
Sbjct: 545 K-FVMREMM 552
>gi|294501624|ref|YP_003565324.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium QM B1551]
gi|294351561|gb|ADE71890.1| O-succinylbenzoate-CoA ligase [Bacillus megaterium QM B1551]
Length = 487
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 150/560 (26%), Positives = 253/560 (45%), Gaps = 83/560 (14%)
Query: 5 SQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISA 64
S I L + A + N V T T Q+ + V +A+ L G++ D +A+
Sbjct: 2 SSQTIPNGLMQRAYLTPNRVAVETPQTSLTFQELHKRVQKVAQQLSFNGVKQDDTIALYM 61
Query: 65 LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT 124
N ++E + AV++IG + +N R + +E + +T +L+ DE+ +L
Sbjct: 62 KNRVEFIEILHAVSYIGARLLLVNTRLTNEEINYQLTDANVSLLIADET----FL----- 112
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
+F + LT LK F +W E I +TSGTTG
Sbjct: 113 --------------MREFQSSITQLTLPALKSSPEAETGFQKTWNLEETFTIMYTSGTTG 158
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKGV+ ++ S+ +G E D +L PL HI GLS M + G +
Sbjct: 159 HPKGVLQTYGNHWWSSVGSALNLGLNEKDCWLIAVPLFHISGLSILMRSVFYGMKIILEE 218
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
+FE+++ EA+E VT + V ++++++ + +K + + +L GGG P ++
Sbjct: 219 RFEARAVNEAIENKGVTIISVVTSMLSNMLDELGERKY---PHTFRCMLLGGGPAPLTIL 275
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+ N + + YGMTETSS F+TL +P + G+
Sbjct: 276 EACVNK--EIPVYQTYGMTETSSQ--FVTL------SPEDSLRKLGSA------------ 313
Query: 365 VGKPAPHVELKVCSDG---SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTG 418
GKP +K+ + +S G I+ +G +V Y L KP + + W TG
Sbjct: 314 -GKPLFPCAMKIVDEKGNETSEAGEIIVKGPNVTKGY----LNKPEATEKALQQGWFYTG 368
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIG +D+ G ++++ RR+ I SGGENVYP E+E +LL+HP + V G+A+ + ++
Sbjct: 369 DIGKVDEEGFLYVLDRRSDLIISGGENVYPAEIENILLKHPAVKEAGVTGVADEKWGQVP 428
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
AC+ +E +S E L H ++ L +K P+ FV + P
Sbjct: 429 AACIVTKED------------------VSDEELSLHM-QQFLAKYKLPKYFVRVEE-LPR 468
Query: 539 TSTGKIRRDEVRREVMSHLK 558
T++ KI +RR++ S ++
Sbjct: 469 TASNKI----IRRKLSSFIQ 484
>gi|398818617|ref|ZP_10577200.1| O-succinylbenzoate-CoA ligase [Brevibacillus sp. BC25]
gi|398027219|gb|EJL20777.1| O-succinylbenzoate-CoA ligase [Brevibacillus sp. BC25]
Length = 508
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 247/563 (43%), Gaps = 86/563 (15%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + I ++ T QQ + + LA L E+ ++ GD + I + NS
Sbjct: 4 IAYWIEKRARITPTRIAVIAKDQALTYQQMNEQIQRLANYLRHELQVKKGDRIGILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYR-------WSFKEASRAITSIRP-----VMLVTDESSD 115
Y+ + A+A +G I P N R + F+++ + +P + L+ ++S
Sbjct: 64 LEYVLLLFAIAKLGAIAVPFNIRLTPAELDYQFEDSGIRVLCAQPEFGATIELIKAKASV 123
Query: 116 SWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+ + L+ +P W S SS S P + + I
Sbjct: 124 AHMIWLEPGELP---WSQDGPSESSQ------------------HSRPEADDGSGDDPYI 162
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 234
IC+TSGTTG PKG V++ + ++ +A + +D + PL HIGG+ A
Sbjct: 163 ICYTSGTTGKPKGAVLTQENMFWNAVHNVAALDLTSEDCSIVLLPLFHIGGIGLFAFPTW 222
Query: 235 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
+ G V KF+ A++ +E H VT ++ VPAI + T DSV+ N
Sbjct: 223 LAGGRVVVAGKFDPDKAIQLIETHRVTIVMGVPAIHEAIRQSPLFATT--SFDSVRWFYN 280
Query: 295 GGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
GG P EL++ P + YG+TETS ++ FM + G
Sbjct: 281 GGAPCPMELIQNFQERGLPFGQ---GYGLTETSPTV-FMIAKEDAKRKAG---------- 326
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSV 408
+GKP E+++ SD G +G +L +G +VM YW++ + +
Sbjct: 327 ----------SIGKPVMFCEVRLISDDGKDVGQGEIGELLVKGPNVMKEYWNR-PEETAK 375
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ + WL TGD+ D+ G ++VGRR I SGGEN+YP E+E V+ + G+ VVG
Sbjct: 376 TIRDGWLYTGDLARFDEEGFAYIVGRRKEMIISGGENIYPLELEQVIGELDGVQEAAVVG 435
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + + E+ + + ++++ ++ HC E+ L +K P+
Sbjct: 436 VPDEKWGEVAKVFIVPKSG----------------VVITEAHIKAHC-EQRLAKYKIPKS 478
Query: 529 FVLWRKPFPLTSTGKIRRDEVRR 551
FV + P +TGKI + + R
Sbjct: 479 FVFLTE-LPRNATGKIIKQALTR 500
>gi|451335840|ref|ZP_21906405.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
gi|449421732|gb|EMD27139.1| Acetoacetyl-CoA synthetase [Amycolatopsis azurea DSM 43854]
Length = 552
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 159/552 (28%), Positives = 236/552 (42%), Gaps = 63/552 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI---LAV 77
R+++V + T + DV A GLL++G+ GD V I + N W EW
Sbjct: 38 RDALVDRAAGKRWTYAELAADVNAFALGLLDLGIAKGDRVGIWSPN-RW--EWTCVQYGC 94
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E + ++V S S Y + A P+L V
Sbjct: 95 AKIGAILVNINPAYRSHELEYVLNQAGIKLIVAANSFKTSDYAGMIAEAGPKCPALEHVV 154
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
L S + V + K R + + + I +TSGTTG PKG +SH
Sbjct: 155 LLDSPAWPSVLEIGG------KADPARLAQRQSELSADDPINIQYTSGTTGFPKGATLSH 208
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ + Y E D P H G+ +A GAC V P FE K+
Sbjct: 209 HNILNNGYFVGELCNYTEADKVCIPVPFYHCFGMVMGNLAATTHGACMVIPAPAFEPKAT 268
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAV TSL VP + +A L S++ + G P E+MK+ +
Sbjct: 269 LEAVAAEKCTSLYGVPTMF--IAELADPDFASHDLSSLRTGIMAGSPCPVEVMKQVIDRM 326
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A++ YGMTETS ++ T D ++E + VG+ PH
Sbjct: 327 GMAEVSICYGMTETSP-VSTQTRADDSVER-------------------RVSTVGRVGPH 366
Query: 372 VELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV + G TRG VML YW+Q W+ TGD+ +D
Sbjct: 367 LEVKVVDPETGLTVPRGEPGEFCTRGYSVMLGYWEQADKTAEAIDAARWMHTGDLAIMDA 426
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VR+R
Sbjct: 427 DGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVIGVPDDKYGEELMAWVRMR 486
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
E L++E +R+ C E L +K PR +V + FP+T TGK+R
Sbjct: 487 EG---------------AAPLTAEAVREFC-EGKLARYKIPR-YVHVVEEFPMTVTGKVR 529
Query: 546 RDEVRREVMSHL 557
+ E+R +S L
Sbjct: 530 KVEMRERSISIL 541
>gi|420149135|ref|ZP_14656316.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754197|gb|EJF37638.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 542
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 238/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ + T +F + + +A+GL+ +G++ GD V I + N EW L A
Sbjct: 35 KEALISVHQDYRVTYTEFYKQITTVAKGLIALGVKQGDRVGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + + S Y ++ A SLR V
Sbjct: 92 AKIGAIMVNINPAYRTSELIYVINQSGISYIFAAPQFKSSNYKKMIDDAREFTESLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G S F+ + +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGESWEYFLAHGEKVTDEKL-------LSFEERVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + Y E D P H G+ + IP F++
Sbjct: 205 HNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNIACTTHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS P G +H VG H
Sbjct: 323 NMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----VGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +DD
Sbjct: 363 LEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGDLAMMDD 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVMAWIKPK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E + L+ E L C+ + + +K PR W+ + FP+T +GK
Sbjct: 483 EG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|118477388|ref|YP_894539.1| acyl-CoA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|118416613|gb|ABK85032.1| acyl-CoA synthase [Bacillus thuringiensis str. Al Hakam]
Length = 496
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 250/557 (44%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A + E+ ++ G+ + I + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYFIYELNVKKGERIGILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIDNFVEINESASFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K P
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLVNQLKSR 496
>gi|187925861|ref|YP_001897503.1| AMP-binding domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187717055|gb|ACD18279.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 576
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/560 (27%), Positives = 255/560 (45%), Gaps = 86/560 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T ++F ++V LA GLL +G+ GD V I + N +EW+L A A IG ++ +N
Sbjct: 61 TWKEFAEEVDILAAGLLTLGIAKGDRVGIWSPNR---VEWLLTQFATARIGAVLVNINPA 117
Query: 91 WSFKEASRAITSIR-PVMLVTDESSDSWYLE----------------LQHTAIPSLRWHV 133
+ E A+ + ++ + S YLE L +P LR+ +
Sbjct: 118 YRLAELEYALNKVGCKAIIAAERFKTSMYLEMLQALAPELATQAPGELHAARLPELRYVI 177
Query: 134 SLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ + SD + +R + D+ K ++ + H + I FTSGTTG+P
Sbjct: 178 RMCDTETPGMLTFSDVI-ERGRVCLDVAKLDAIGATLSCHE-----PINIQFTSGTTGNP 231
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK 245
KG ++HS ++ + + E D PL H G+ A +A + VGA VF +
Sbjct: 232 KGATLTHSNVVNNARYIAMAMRLSEQDGLCIPVPLYHCFGMVLAVLACVSVGAKMVFPGE 291
Query: 246 -FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F+ + L AV + T+L VP + +A L ++ + G P E M
Sbjct: 292 GFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPNFATYDFSRLRTGIMAGSPCPIETM 349
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K+ + +++ AYGMTETS P +F + T + + + +
Sbjct: 350 KKVVSRMHLSEITIAYGMTETS-------------------PVSFQSSTTDPLDK-RTTT 389
Query: 365 VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTG 418
VG+ PH+E+K+ + V G + TRG VM YW D+ + S+ G W+ TG
Sbjct: 390 VGRIQPHLEVKIVDPLGAIVPVGETGELCTRGYSVMQGYWGDEAKTRESIVDG--WMHTG 447
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ ++D G +VGR + GGEN+YP E+E L +HP I + V G+ + + E V
Sbjct: 448 DLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDTKYGEEV 507
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A V LR Q +++E ++Q C + +K P+ ++ + P+
Sbjct: 508 CAWVVLRSGEQ----------------VTAEEIQQFCH-GQIAHYKVPK-YIRFVDELPM 549
Query: 539 TSTGKIRRDEVRREVMSHLK 558
T TGK+++ +R +++S LK
Sbjct: 550 TVTGKVQKFIMREQMISELK 569
>gi|269963119|ref|ZP_06177454.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832083|gb|EEZ86207.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 521
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 241/518 (46%), Gaps = 60/518 (11%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
N+A L +GL +GD VA+S N ++ + G +V PLN + +E + +
Sbjct: 39 NIAANLKRLGLEAGDKVALSCPNITYFPMVYYGILKAGCVVVPLNVLFKGREIAYHLNDS 98
Query: 104 RPVMLVTDESSDSW----YLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSL 159
E S+ Y + + +SL + + + D A+ L+ +
Sbjct: 99 DAKAYFCFEGSEELPMGSYGRQGFSQAEQCEYFISLSARCEEGEHAIDAWLAEELESFE- 157
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 219
+ + + +I +TSGTTG PKG +SH+ ++ +++ ++ D + T
Sbjct: 158 -----SVTRHGDDTAVILYTSGTTGQPKGAELSHTNMLTNAMSSQYLMRLEYSDTTMATL 212
Query: 220 PLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 278
PL H G + M A ++ G+ V IP+FE K +E + QH V+ VP + +A L
Sbjct: 213 PLFHSFGQTVMMNASVLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRA 270
Query: 279 VKKTWKGRDSVKKIL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
+++ + + VK L +GG +P E++++ + F + ++ YG++ET+ TF +
Sbjct: 271 GEQSPEHSELVKHSLRLGVSGGASMPVEVIRQFEHRF-ELPVLEGYGLSETAPVATFNHI 329
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHV 394
G+ P SV QP V K A ++K + +G + + V
Sbjct: 330 D--------------GDRLPGSVGQPLCGYVIKIA---DVKGHARAIGELGEVCIKSPSV 372
Query: 395 MLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
M Y+ +P + + W TGDIG +D+ GN+++V R I GG NVYP E+
Sbjct: 373 MKGYY----GRPEATRDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREI 428
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL+ HP + + VVG + RL E V A V L + +++C S + L
Sbjct: 429 EEVLMCHPDVEMVAVVGEHDDRLGEEVHAHVVLHQ-----DAHC-----------SPDTL 472
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
CRE+ L +K PR V RK P+T+TGKI + E+
Sbjct: 473 IAWCREQ-LADYKYPRR-VFIRKALPMTATGKILKREL 508
>gi|406658110|ref|ZP_11066250.1| long-chain-fatty-acid-CoA ligase [Streptococcus iniae 9117]
gi|405578325|gb|EKB52439.1| long-chain-fatty-acid-CoA ligase [Streptococcus iniae 9117]
Length = 506
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 233/533 (43%), Gaps = 70/533 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T + Q +NLA LL G+ GD VA+ N Y + + A IG ++ P+N+R
Sbjct: 29 TYEDLNQRAVNLAHYLLAYGISKGDRVALFCPNDIAYFDLLFACTKIGAVLVPINWRLKP 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E + + P ++ + +L +P S V+ DM I
Sbjct: 89 IEIKKILEDCHPKIVFFASNHKDRLEKL----VPD-----------SQMVDVDDMEYDLI 133
Query: 154 LKGYSLRSLPFTH--SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE 211
+ + LPF ++P I +TSG+TG PKGV+ISH+ +I ++ I +
Sbjct: 134 CETKIEKELPFVKVDKYSP---AFIMYTSGSTGMPKGVMISHNGMIQNAMNGIVNWNFKM 190
Query: 212 DDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM 270
D L +AP+ HI L A+ ++ G+ + F + A+E + + +T L VP +
Sbjct: 191 SDRTLVSAPMFHIAALCGFAIPFILNGSQLIIERYFNPREAIELISDYKITHLFMVPTM- 249
Query: 271 ADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLT 330
TL+ + + K+ GG S+ +++A +I++YG+TE
Sbjct: 250 --YYTLLTHESFYPQALESVKVFISGGAPASDFVQKAFKKMGHT-IINSYGLTEVG---- 302
Query: 331 FMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----G 385
P F + P+ + GKP V ++ V G
Sbjct: 303 ---------------PNNFRILPEEVADHPKSI--GKPIMFVRARIVDKEFQDVKRGDIG 345
Query: 386 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 445
++ G HV L YW+ G + TGD+ D G ++V R+ I +GGEN
Sbjct: 346 ELILSGEHVCLGYWENSAETQKAFHGN-YFCTGDLARQDQEGFYYIVNRKKELIITGGEN 404
Query: 446 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 505
V P EVEAVL +HP I +VVG NA E V A ++L D + +KE
Sbjct: 405 VLPSEVEAVLNRHPLIKDSIVVGFDNAEFGESVGAAIQLE---------ADFADYSKE-- 453
Query: 506 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
L ++C E +L G+KAP+ +++ FP + GKI + ++++ + ++K
Sbjct: 454 -----LNRYCLE-HLAGYKAPKAYLVLED-FPRNAIGKIDKGQIQKWLTDYVK 499
>gi|296270056|ref|YP_003652688.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
gi|296092843|gb|ADG88795.1| AMP-dependent synthetase and ligase [Thermobispora bispora DSM
43833]
Length = 544
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 156/550 (28%), Positives = 243/550 (44%), Gaps = 64/550 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V R T + V +A GLL G++ GD V I + N EW+ A
Sbjct: 35 REALVEAATGRRWTYAELDAAVNEVALGLLARGIKKGDRVGIWSPNCA---EWVFVQYAT 91
Query: 78 AFIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
A IG I+ +N YR E + +R ++ + + ++ R V +
Sbjct: 92 AKIGAILVNVNPAYRAHELEYVVRQSGMRLLISAVAYRTSDYRAMIEQIG---FRDVVYI 148
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G S + R + L +LR T ++ + + I +TSGTTG PKG +SH
Sbjct: 149 GEPSWE----RLIEDGRSLDAAALRERAATLTF--DDPINIQYTSGTTGFPKGATLSHHN 202
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSALE 253
++ ++GY E D PL H G+ +A G+C V P F+ ++ L
Sbjct: 203 ILNNGFFVGELLGYTEQDRICLPVPLYHCFGMVMGNLAAASHGSCVVLPAPGFDPEATLR 262
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AVE+ TSL VP + +A L + S++ + G P E+MK
Sbjct: 263 AVERERCTSLYGVPTMF--IAELGHPEFASFDLSSLRTGIMAGSPCPVEVMKRVVADMHM 320
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ YGMTETS T T T G + VG+ PH+E
Sbjct: 321 SEVAICYGMTETSPVSTM------TRRTDGLARRT--------------ETVGRVMPHIE 360
Query: 374 LKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + VG + TRG VML YW+Q A W+ TGD+ ++D+ G
Sbjct: 361 VKIVDPETGRTVPRGQVGELCTRGYSVMLGYWEQPEATAEAIDRARWMHTGDLATMDEEG 420
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V +VGR + GGEN+YP E+E L HP I + V+G+ + + E ++A + +R
Sbjct: 421 YVNIVGRIKDMVIRGGENIYPREIEEFLYTHPDIADVQVIGVPDEKYGEELMAWIIMRPG 480
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ L++E LR+ C + L +K PR +V FP+T TGKIR+
Sbjct: 481 AE---------------PLTAERLREFCAGR-LAHYKIPR-YVHVVDSFPMTVTGKIRKV 523
Query: 548 EVRREVMSHL 557
E+R + + L
Sbjct: 524 EMREQAIEIL 533
>gi|55981432|ref|YP_144729.1| long-chain fatty acid--CoA ligase [Thermus thermophilus HB8]
gi|55772845|dbj|BAD71286.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus HB8]
Length = 560
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 154/545 (28%), Positives = 239/545 (43%), Gaps = 89/545 (16%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
A+GL ++G+R GD VAI NS ++ GG+ +N ++ +E +
Sbjct: 63 RFAQGLKDLGVRPGDRVAIMLPNSPQFVIAFYGTLLAGGVGVNVNPLYTPRELRHQLADA 122
Query: 104 RPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-----------KRDMLT-- 150
LV + YLE++ +P R V+ DF+ KRD L
Sbjct: 123 GAETLVILDHLLPRYLEVEKE-VPVKRVVVT---GIKDFLPFPKNLLYPLKAKRDGLPLG 178
Query: 151 ----------ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
A++LK R H PE ++ +T GTTG KG +++H L+
Sbjct: 179 FPKREGFHAFAELLK----RPPAEPHVPDPEDLALLQYTGGTTGLSKGAMLTHRNLVANV 234
Query: 201 LAKIA-------IVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSAL 252
L A +VG G V L P H+ G++ AM L G V +P+ E K+ +
Sbjct: 235 LQIDAWDPTSKDLVGKG---VMLGALPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIKAIV 291
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
EA+E+H VT VP + +++ + SV+ ++G LP E+ E
Sbjct: 292 EAIEKHQVTHFPGVPTLYVAFNNFPGIER--RDLKSVRACISGSAPLPLEVA-ERFERLT 348
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
AKL+ YG+TE S LY G+ + G+ VG P P V
Sbjct: 349 GAKLVEGYGLTEASPVTHCNPLY-------GE--RRLGS-------------VGLPFPGV 386
Query: 373 ELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+ KV + VG + +G +VM YW++ + + + WL TGD+ +D+ G
Sbjct: 387 DAKVVDEEGKELPPGEVGELAVKGPNVMKGYWNR-PEETQKTLKDGWLFTGDLAKMDEDG 445
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
++V R+ I +GG N+YP EVE VL QH + VVG+ + E V A + L+
Sbjct: 446 YFYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKPE 505
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+Q S D + + CR+ NL +K PR+ + +R+ P +S GKI R
Sbjct: 506 YQGKVSEKD--------------IERFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRR 549
Query: 548 EVRRE 552
E+R E
Sbjct: 550 ELREE 554
>gi|378720187|ref|YP_005285076.1| AMP-binding domain-containing protein [Gordonia polyisoprenivorans
VH2]
gi|375754890|gb|AFA75710.1| AMP-binding domain-containing protein [Gordonia polyisoprenivorans
VH2]
Length = 508
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 245/552 (44%), Gaps = 70/552 (12%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
++R AA+ + + + ++F + LA L G+ GD VA LN +L
Sbjct: 7 IARRAAIGPDRPAITFDDTTMSFREFSDRIDRLAAALRAGGVGVGDRVAYLGLNHPMFLV 66
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
+ A A G PLN+R + E + I L+ D + + E+ +L+
Sbjct: 67 TMFASARAGATFVPLNFRLTGAELAYIINDAGAHTLIADPALAAVVDEVADQL--TLQRR 124
Query: 133 VSLGS----SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+++G S++ V AD + S + +I +TSGTTG PKG
Sbjct: 125 IAVGEHAGWESAEAVIAHAEPIADPARPAS------------DAIAVIMYTSGTTGRPKG 172
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFE 247
+++H L ++ + + D+ APL HIGGL+ + + L G V P F+
Sbjct: 173 AMLTHGNLFWNNMNSLLCLDVETSDISYCAAPLFHIGGLNVTTLVTLQKGGHIVLAPTFD 232
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+AL ++E+H VT++ VPA+ ++ + + + S++ ++ GG +P LM+
Sbjct: 233 PAAALASIEKHRVTTMFGVPAMFLFMSQVPQFETA--DLSSLRYLICGGAPVPEPLMRRY 290
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP-------NSVHQP 360
YG+TET+ M L E+ ++ A V P ++ + P
Sbjct: 291 AER--GLAFAQGYGLTETAPLALVMGLD----ESAAKIGAAGNKVLPLSDVRLVDATNSP 344
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
V VG P G + RG VM+ YW A +V E W TGDI
Sbjct: 345 --VPVGTP----------------GEVCVRGPQVMVGYWRNQAATDAVIDDEGWFHTGDI 386
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G DD G +++V R + +GGENVYP EVE+VL HP + I ++G+ +A+ E V A
Sbjct: 387 GREDDDGYIYVVDRVKDMVITGGENVYPAEVESVLYSHPAVAEIAILGLPDAKWGEAVTA 446
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ ++ +E+ L E LR +++ L +K P L + + P
Sbjct: 447 VI--------------ATAPGQEVTL--EELRDFAKDQ-LARYKLP-LRLEFVDALPRNP 488
Query: 541 TGKIRRDEVRRE 552
+GK+ + ++R +
Sbjct: 489 SGKVLKYQLREQ 500
>gi|53721001|ref|YP_109987.1| AMP-binding domain-containing protein [Burkholderia pseudomallei
K96243]
gi|126453323|ref|YP_001068259.1| AMP-binding protein [Burkholderia pseudomallei 1106a]
gi|167847888|ref|ZP_02473396.1| acyl-CoA synthetase [Burkholderia pseudomallei B7210]
gi|167896446|ref|ZP_02483848.1| acyl-CoA synthetase [Burkholderia pseudomallei 7894]
gi|167904847|ref|ZP_02492052.1| acyl-CoA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167913125|ref|ZP_02500216.1| acyl-CoA synthetase [Burkholderia pseudomallei 112]
gi|242318046|ref|ZP_04817062.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|386863694|ref|YP_006276643.1| AMP-binding protein [Burkholderia pseudomallei 1026b]
gi|418394740|ref|ZP_12968837.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|418537313|ref|ZP_13102953.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|418554847|ref|ZP_13119609.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|52211415|emb|CAH37406.1| putative long-chain-fatty-acid--CoA ligase [Burkholderia
pseudomallei K96243]
gi|126226965|gb|ABN90505.1| AMP-binding domain protein [Burkholderia pseudomallei 1106a]
gi|242141285|gb|EES27687.1| AMP-binding domain protein [Burkholderia pseudomallei 1106b]
gi|385350022|gb|EIF56574.1| AMP-binding domain protein [Burkholderia pseudomallei 1026a]
gi|385369739|gb|EIF75049.1| AMP-binding domain protein [Burkholderia pseudomallei 354e]
gi|385374682|gb|EIF79520.1| AMP-binding domain protein [Burkholderia pseudomallei 354a]
gi|385660822|gb|AFI68245.1| AMP-binding domain protein [Burkholderia pseudomallei 1026b]
Length = 576
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 179 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 239 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 516 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|398824049|ref|ZP_10582396.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
gi|398225283|gb|EJN11558.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
Length = 526
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 150/520 (28%), Positives = 231/520 (44%), Gaps = 65/520 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
+A LL +G++ GD +A NS+ Y E ++ G ++AP+N+R + E + +
Sbjct: 46 VANALLAMGVKKGDRIAYLGKNSDLYFELLMGAMKAGVVMAPVNWRLAGPEIAFIVGDCN 105
Query: 105 -PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLR 160
PV+ V E + +PS+R ++ + DF RD + D
Sbjct: 106 APVLFVGPEFVTQ--VRQIKDQLPSVRTIITTEGGAPEWQDFAAWRDAQSGDD------P 157
Query: 161 SLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDVY 215
++P I +TSGTTG PKG ++SH+ + VQ+ K + DDV
Sbjct: 158 NVPIDT----RDIAIQLYTSGTTGKPKGAMLSHANFLNLVQTGNAADKPEWNRWSTDDVS 213
Query: 216 LHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
L P+ HIGG + L GA V +F+ L+ EQ +T L VPA M +
Sbjct: 214 LVAMPIFHIGGSGWGVMGLYHGARGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVR 273
Query: 276 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
R + R +K +L G +P+ L+KE F K + YGMTET+ ++ +
Sbjct: 274 QPRARTVDFSR--LKYMLYGASPIPAALLKECIEVF-KCGFVQMYGMTETTGTIVALPPE 330
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTR 390
D +E ++ A GK P VE+ + DG VG I TR
Sbjct: 331 D-HVEGLERMRSA-----------------GKALPGVEIAILDVDGKPLPPREVGEIATR 372
Query: 391 GAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 450
M YW+ A S G+ WL TGD G +D+ G +++ R I SGGEN+YP E
Sbjct: 373 SGSNMAGYWNLPEATASTLRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENIYPAE 432
Query: 451 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 510
VE+ L HP + V+GI + + E V A V ++ Q + ++
Sbjct: 433 VESALCDHPDVAEAAVIGIPDEKWGEAVKAVVVMKPGKQATATD---------------- 476
Query: 511 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ RE+ + GFK P+ V + P +GKI R ++R
Sbjct: 477 IINFTRER-IAGFKTPKS-VEFLPALPRNPSGKILRRQLR 514
>gi|294501637|ref|YP_003565337.1| AMP-binding domain-containing protein [Bacillus megaterium QM
B1551]
gi|294351574|gb|ADE71903.1| AMP-binding enzyme domain protein [Bacillus megaterium QM B1551]
Length = 528
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 253/552 (45%), Gaps = 60/552 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ +V+ N T +F Q+ +A+ LL GL+ GD +AI A N +L A A I
Sbjct: 23 QEAVIYSEQNIRYTYAEFYQETSRVAKALLATGLKKGDHIAIWATNVPEWLLLQFAAARI 82
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLEL----QHTAIPSLRWHVSL 135
G ++ LN + E ++ S + DE + Y + +H +P L+ ++L
Sbjct: 83 GAVLVTLNTSYQSSELEYVLSHSDTTALFFIDEFKSTSYTSIITSIEHN-LPKLKHLINL 141
Query: 136 GSSS-----SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
SS ++F+ M++ ++L + S + + +TSGTTG PKGV+
Sbjct: 142 SGSSEHTSWNEFLMSSLMVSDEVLDKHE-------QSLHIHDVINMQYTSGTTGFPKGVM 194
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESK 249
+SH ++ + +D P H G + +A + VGA + I +F+
Sbjct: 195 LSHHNIVNNGFLVAQSMKLTNEDRLCIPVPFFHCFGCVLGVLACVSVGATMLPIIEFQPA 254
Query: 250 SALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKE 306
S L VE T+L VP + +A+L TL + D +++ + G P+E+MK
Sbjct: 255 SVLRTVENEKCTALHGVPTMFIAELNTL-----DFHQYDLSTLRTGIMAGSNCPAEVMKR 309
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ ++ AYG TETS +T T PT ++ + Q G V + Q G
Sbjct: 310 VIHDMGINEITIAYGQTETSPVITQTT---PT-DSIERRVQTVGKVHNHVQIQIINPVTG 365
Query: 367 KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
KPA E G + +G M Y+ + + + E WL TGD+ +ID
Sbjct: 366 KPASFGEQ----------GELCAKGYLTMKGYY-KMPEETEKTIVEGWLHTGDLATIDKD 414
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V + GR I GGEN+YP E+E L + P + + +VGI + + E V AC++L++
Sbjct: 415 GYVKITGRLKDMIIRGGENIYPREIEEFLYRIPEVEDVQIVGIPDPKYGERVAACIKLKQ 474
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L+++ ++ C+ K L FK P + + FP+T++GKI++
Sbjct: 475 HS----------------FLTAQEIKDFCKGK-LAHFKIPE-HIYFIDDFPMTASGKIQK 516
Query: 547 DEVRREVMSHLK 558
+++ ++++ K
Sbjct: 517 YKLKEKIVALYK 528
>gi|254298706|ref|ZP_04966157.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
gi|157808515|gb|EDO85685.1| AMP-binding domain protein [Burkholderia pseudomallei 406e]
Length = 570
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 248/564 (43%), Gaps = 69/564 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R +VV T ++F +V LA L+++G+ GD V I + N +EW L A A
Sbjct: 41 RAAVVFREQGVRRTWREFADEVDALAAALIQLGIARGDRVGIWSPNRAEWLLTQ-FATAR 99
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE-----------------L 121
IG ++ +N + E A+ + +L+ E S Y E L
Sbjct: 100 IGAVLVNVNPAYRLAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVL 159
Query: 122 QHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+PSLR V++ ++ + ++ D+L S R + + I FTS
Sbjct: 160 CAARVPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTS 219
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 239
GTTGSPKG ++H ++ + + ++ E D PL H G+ S +A + GA
Sbjct: 220 GTTGSPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAK 279
Query: 240 HVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
VF FE + L AV T+L VP + +A L +++ + G
Sbjct: 280 MVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSP 337
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
P E MK +++ AYGMTETS P +F + T +S+
Sbjct: 338 CPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLE 378
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ + VG+ PH+E K+ + V G + TRG VML YWD A+ + +
Sbjct: 379 K-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDG 436
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++
Sbjct: 437 WMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSK 496
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A + LR ++ LR+ C + +K PR +V +
Sbjct: 497 YGEEVCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYKVPR-YVRFV 538
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
P+T TGK+++ +R ++ L
Sbjct: 539 DELPMTVTGKVQKFVMRERMIDEL 562
>gi|357039287|ref|ZP_09101081.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358186|gb|EHG05954.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 547
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 149/556 (26%), Positives = 250/556 (44%), Gaps = 74/556 (13%)
Query: 31 RHNTGQQFVQDVLN-LARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLN 88
R+N Q +DV N A+GL+ +G+ +GD +A+ A N EW + A +G ++ +N
Sbjct: 35 RYNYRQ--FRDVCNQAAKGLMRLGVNTGDHIAMWANNVPEWVITQ-FATGKMGAVLVTVN 91
Query: 89 --YRWSFKEASRAITSIRPVMLV-----TDESSDSWYL-----------ELQHTAIPSLR 130
YR E + ++LV +DE + Y EL+ +P L+
Sbjct: 92 TNYRSFELEYLLKQSDSTTIILVGGVRDSDEYVNIMYELCPELNQCKPGELKSQRLPKLK 151
Query: 131 WHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+ +G + N D++T AD + L P+ V + +TSGTTG PKG
Sbjct: 152 NVIYIGEENYPGMFNWNDIMTMADHVSEEELEKR--QEDAKPDDVVNMQYTSGTTGFPKG 209
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFE 247
V+++H LI +++ + + +D P H G + + + GA V + KF+
Sbjct: 210 VMLTHINLIGNAVSMAECLNFSSEDRLCIPVPFFHCFGCVIGTLVCAVTGAAMVPVEKFD 269
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
LE VE T++ VP + +A L +K S++ + G P+E+MK
Sbjct: 270 PAKVLETVEVEKCTAVHGVPTMF--IAELEEMKNKKYNTASLRTGVMAGAPCPTEVMKAV 327
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
N+ +++ YG TE S +T DP + + VG+
Sbjct: 328 VNTMGASEICITYGQTEASPGITMTRTDDPI--------------------ELRVSSVGR 367
Query: 368 PAPHVELKVCS-DGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
P+VE+KV D V G + TRG HVM Y++ A S + WL TGD+
Sbjct: 368 ALPNVEVKVVDPDTGREVPPGIQGELCTRGYHVMKGYYNMPEATESAIDKDNWLHTGDLA 427
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+D+ G + GR I GGEN+YP E+E L H + + +VG+ + + E V A
Sbjct: 428 IMDENGYCKITGRLKDMIIRGGENIYPREIEEFLYTHTKVRDVQIVGVPSQKYGEEVAAF 487
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
++L+ D +S + E ++ C K ++ FK P+ F+ + +P T++
Sbjct: 488 IQLK----------DGTSA------TVEEFKEFCTGK-ISRFKIPKFFIFVDE-YPTTAS 529
Query: 542 GKIRRDEVRREVMSHL 557
GKI++ +R + + L
Sbjct: 530 GKIQKFRLREQALEAL 545
>gi|383763835|ref|YP_005442817.1| long-chain-fatty-acid--CoA ligase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384103|dbj|BAM00920.1| long-chain-fatty-acid--CoA ligase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 493
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 220/517 (42%), Gaps = 60/517 (11%)
Query: 42 VLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT 101
VL L + G++ GD VAI ++ LA +G I PLN ++++E +
Sbjct: 21 VLRTMAMLRQKGVQPGDRVAIHLTKGLPFIYLHLATMRLGAISLPLNPAYTWRELLYFLQ 80
Query: 102 SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRS 161
+ TD S S EL T PSL+ + L + + M + +
Sbjct: 81 DAEAKLFFTDALSQSAIQELA-TQAPSLQEVMMLEKGMGNAFERLIMPHREA----DAAT 135
Query: 162 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 221
LP P+ ++ +TSGTTG PKG ++H L + + DDV LH PL
Sbjct: 136 LPLPSD--PDATCLMIYTSGTTGWPKGAELTHRNLTANLNSLHEAWEWQNDDVLLHVLPL 193
Query: 222 CHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
H+ GL A+ L GA V +P+FE LE + + T + VP I L +
Sbjct: 194 FHVHGLIVALHGALNAGATTVLLPRFEPLQTLELLVRRPCTVFMGVPTIHRRLVEAPGAE 253
Query: 281 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
+ ++ + +G LP +L F +L+ YGM+E
Sbjct: 254 RY--SLQHMRLVTSGSDRLPDDLFYRFEKQF-GVQLLERYGMSEA--------------- 295
Query: 341 TPGQLPQAFGNVTPNSVHQPQGV-CVGKPAPHVELKVCSDGSS------HVGRILTRGAH 393
G + N +H + V VG P P VE+++ ++ VG + RG +
Sbjct: 296 ---------GMILSNPLHGERRVGSVGLPLPGVEVRIADPETNAPLPDGQVGEVQVRGEN 346
Query: 394 VMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEA 453
V YW Q + T + WL TGD+G + G L GR I SGG NVYP EVE
Sbjct: 347 VCKGYWRQPEKTAAAFTPDGWLRTGDLGLREPDGYFTLKGRAKDLIISGGYNVYPPEVER 406
Query: 454 VLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQ 513
VL +HP + V+G +A E V+A V LR + E + Q
Sbjct: 407 VLNEHPAVEASAVIGCPDAEWGERVIAIVELRSG----------------VRAEPEEIMQ 450
Query: 514 HCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
CRE+ L +KAPR VL+ P P + GK+++ +R
Sbjct: 451 FCRER-LAPYKAPRQ-VLFTAPLPRNALGKVQKSALR 485
>gi|134281418|ref|ZP_01768126.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
gi|134247085|gb|EBA47171.1| AMP-binding domain protein [Burkholderia pseudomallei 305]
Length = 576
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATARAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 179 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 239 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 516 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|254186486|ref|ZP_04893003.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|254194656|ref|ZP_04901087.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403520675|ref|YP_006654809.1| AMP-binding protein [Burkholderia pseudomallei BPC006]
gi|157934171|gb|EDO89841.1| AMP-binding domain protein [Burkholderia pseudomallei Pasteur
52237]
gi|169651406|gb|EDS84099.1| AMP-binding domain protein [Burkholderia pseudomallei S13]
gi|403076317|gb|AFR17897.1| AMP-binding domain protein [Burkholderia pseudomallei BPC006]
Length = 570
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 54 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 112
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 113 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 172
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 173 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 232
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 233 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGAT 292
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 293 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 350
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 351 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 390
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 391 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 449
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 450 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 509
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 510 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 551
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 552 FVMRERMIDEL 562
>gi|67643093|ref|ZP_00441842.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
gi|124383885|ref|YP_001027564.1| AMP-binding protein [Burkholderia mallei NCTC 10229]
gi|254175161|ref|ZP_04881822.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|254201539|ref|ZP_04907903.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|254206875|ref|ZP_04913226.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|254357430|ref|ZP_04973704.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|124291905|gb|ABN01174.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10229]
gi|147747433|gb|EDK54509.1| AMP-binding domain protein [Burkholderia mallei FMH]
gi|147752417|gb|EDK59483.1| AMP-binding domain protein [Burkholderia mallei JHU]
gi|148026494|gb|EDK84579.1| AMP-binding domain protein [Burkholderia mallei 2002721280]
gi|160696206|gb|EDP86176.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 10399]
gi|238524342|gb|EEP87775.1| AMP-binding enzyme domain protein [Burkholderia mallei GB8 horse 4]
Length = 570
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 54 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 112
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 113 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 172
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 173 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 232
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 233 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGAT 292
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 293 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 350
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 351 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 390
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 391 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 449
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 450 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 509
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 510 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 551
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 552 FVMRERMIDEL 562
>gi|423509848|ref|ZP_17486379.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HuA2-1]
gi|402456080|gb|EJV87858.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HuA2-1]
Length = 496
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 248/553 (44%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ ++ ++ G+ +AI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ + L +Q+ + ++
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGATVLFVEETFQNMALSMQN--VTYVQR 125
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+S+ S LK R + + IIC+TSGTTG PKG V+
Sbjct: 126 VISIKS----------------LKEIEDRKIDNFEEINESASFIICYTSGTTGQPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTVHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIVPRKFEPTI 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E++ VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKYKVTVVMGVPTIHQALINCAKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
+ + + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCDYVLIDENKNKVEIGEVGELLIRGPNVMKGYWNRPDATEETIQDG--WLYTGDLARV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V+G + + E+ +A +
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSEVCEVAVIGTQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L EV+ HCR L FK P+ V + FP +TGK
Sbjct: 441 --------------VKKSCSVLTEKEVI-DHCR-LFLAKFKVPKEIVFLEE-FPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLANQLKSR 496
>gi|226365555|ref|YP_002783338.1| AMP-binding domain protein [Rhodococcus opacus B4]
gi|226244045|dbj|BAH54393.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 545
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 246/557 (44%), Gaps = 66/557 (11%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL- 75
A R+++V R T + +DV +A GLL+ G+ GD V I A N EW L
Sbjct: 32 AHADRDALVDRPSGRRWTYAELKRDVDAVAAGLLKRGIVKGDRVGIWAPNCP---EWTLI 88
Query: 76 --AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSL 129
A A IG I+ +N + E + +LV+ +SSD + +E +
Sbjct: 89 QYATAKIGAILVNINPAYRAHELKYVLDQAGIRLLVSAPQFKSSDYAAMIEEVRPECGDV 148
Query: 130 RWHVSLGSSSSDFVNKRDMLTADILKGYSLRS--LPFTHS-WAPEGAVIICFTSGTTGSP 186
V LGS+ + L +D + ++ LP + +P+ + I +TSGTTG P
Sbjct: 149 EMVVLLGSA------EWSRLASDGMAAHAADPARLPAAQAALSPDDPINIQYTSGTTGFP 202
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP-- 244
KG +SH ++ + Y E+D P H G+ + IP
Sbjct: 203 KGATLSHHNILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACTSHGATMVIPGR 262
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F+ K+ L+AVE TSL VP + +A L S++ + G P E+M
Sbjct: 263 SFDPKATLQAVEAEKCTSLYGVPTMF--IAELADHDFDSYDLSSLRTGIMAGSPCPVEVM 320
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K A++ YGMTETS P + + +++ Q +
Sbjct: 321 KHVIELMGMAEVSICYGMTETS-------------------PVSLQTRSNDTIDQ-RVST 360
Query: 365 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VG+ PH+E+K+ + G + TRG VML YW+ W+ TG
Sbjct: 361 VGRVGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTG 420
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E +
Sbjct: 421 DIGVMDCDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEEL 480
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
+ VR++E + E L +++V R+ C K L +K P+ +V FP+
Sbjct: 481 MVWVRMKE--------------DTEPLDAAKV-REFCTGK-LAHYKIPK-YVHVVDEFPM 523
Query: 539 TSTGKIRRDEVRREVMS 555
T TGK+R+ E+R + +S
Sbjct: 524 TVTGKVRKVEMREQSLS 540
>gi|170728362|ref|YP_001762388.1| AMP-dependent synthetase and ligase [Shewanella woodyi ATCC 51908]
gi|169813709|gb|ACA88293.1| AMP-dependent synthetase and ligase [Shewanella woodyi ATCC 51908]
Length = 558
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/547 (27%), Positives = 241/547 (44%), Gaps = 75/547 (13%)
Query: 38 FVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA---VAFIGGIVAPLNYRWSFK 94
+ Q V A GLL++ ++ GD VAI A N +EW +A A IG ++ +N +
Sbjct: 55 YHQKVTQFAAGLLQLNVKPGDRVAIWAPNC---IEWCIAQFATAKIGAVLVCINPAYRIS 111
Query: 95 EASRAITSIRPVMLVTD---ESSDSWYLELQHTAIPSLRWHVSLGSSSSDF--------- 142
E S ++ + +L+T +SSD YLE+ T +P L+ +S +F
Sbjct: 112 ELSYSLKKVGCKVLITATNFKSSD--YLEMIETIVPELKLCSPGELTSENFPLLKSVIQM 169
Query: 143 --VNKRDMLTADILKGYSLRSL-----PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
++ M D + Y L +P+ A+ I FTSGTTG PKG ++HS+
Sbjct: 170 GDKSRSGMFGFDEVSDYCTDELIEKVNSIGQRLSPDDAINIQFTSGTTGEPKGATLTHSS 229
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALE 253
++ + DD PL H G+ + C P F+ + LE
Sbjct: 230 ILNNGFQVGEKMRLTYDDKLCIPVPLYHCFGMVMGNLACITHGCSAVFPSDSFDPIACLE 289
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
A++++ T+L VP + +A L + S++ + G P E +K+
Sbjct: 290 AIDEYRCTALHGVPTMF--IAILNEPEFNAYDLTSLRTGIMAGALCPIETIKKVIGDMNM 347
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ AYG TETS ++ MT D +E VT VGK P +E
Sbjct: 348 KHILIAYGQTETSP-VSHMTGIDDAIEK---------RVTT----------VGKIGPGLE 387
Query: 374 LKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
+K+ + V G I RG VM YW+ + + WL +GD+G +D+
Sbjct: 388 VKLVNQNGETVPIGVEGEICIRGYAVMKGYWEDEQKTKETISQDGWLHSGDLGEMDNDNY 447
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+ + GR I GGEN+YP E+E L HP I+ + V GI + + E V A
Sbjct: 448 LKVTGRMKDMIIRGGENIYPREIENFLYTHPTILDVQVFGIKDDKYGESVCA-------- 499
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
W D+S L+ + ++ C++ +++ FK P K FP+T TGKI++
Sbjct: 500 -WIICKKDRS-------LTVQEVQDFCKD-SISHFKIPEHISFVTK-FPMTVTGKIQK-F 548
Query: 549 VRREVMS 555
V R++M
Sbjct: 549 VMRDMME 555
>gi|448237590|ref|YP_007401648.1| 2-succinylbenzoate--CoA ligase [Geobacillus sp. GHH01]
gi|445206432|gb|AGE21897.1| 2-succinylbenzoate--CoA ligase [Geobacillus sp. GHH01]
Length = 518
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/556 (27%), Positives = 247/556 (44%), Gaps = 84/556 (15%)
Query: 18 AVKR--NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL 75
AV+R N V + G+R T +QF ++V +A L IG++ D V I N
Sbjct: 10 AVERFPNRVAVVEGDRRYTYRQFHKEVTKVAASLQRIGIKQHDRVMILLKNRFENTVIYW 69
Query: 76 AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
A+ IG + P+N+R + KE + +V + +S L+ P L + +
Sbjct: 70 ALQKIGAVYTPINFRLAVKEVEYCVNDAEATAVVYESASQESVLKANFQQRPIL---IGV 126
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA---PEGAVIICFTSGTTGSPKGVVIS 192
G ADI + P + + I+ +TSGTTG PKGV +
Sbjct: 127 GEVEG----------ADIYYNELVDRSPESFEKPLINDDDVAIMLYTSGTTGKPKGVPRT 176
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSAL 252
H +LA I Y + + L T PL H G+ S ++++ + +V +P F++K AL
Sbjct: 177 HKNEYSAALAHIIQNQYQDGESTLGTMPLYHTMGMRSLLSIMFLNGKYVILPDFDAKEAL 236
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNS 310
E +E+ +TSL VP + D+ + + D +KKI G + + L ++
Sbjct: 237 ELLEREEITSLYLVPTLYHDILN----HEEFHNYDLSKLKKIGYAGAPMTTALTEKCVKM 292
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YG TE TF + PN +P C GKP
Sbjct: 293 LKPEVFVNHYGSTEI---YTF-------------------TINPNVAEKPG--CAGKPGL 328
Query: 371 HVELKVCS---DGSSHVGRILTRG--AHVMLR---------YWDQFLA-KPSVSTGEVWL 415
H +++ +G+S I+ +G +++ YW++ A K ++ G W
Sbjct: 329 HQNIRIVKADPNGNSTPEDIVEKGEIGEIIVNIESPESFKGYWNRPDATKKAIRDG--WY 386
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G +D+ G++++VGR + I SGGEN++P EVE VL +HP + + V+G + R
Sbjct: 387 FTGDLGMLDEDGDLYVVGRVDDMIISGGENIHPIEVEDVLSKHPKVHEVAVIGEEDERWG 446
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK-NLTGFKAPRLFVLWRK 534
++V A V K+ L+S+ L +C+ L+ FK PR +V K
Sbjct: 447 QIVAAYV-----------------VPKDPSLTSQELDHYCKNNTTLSNFKRPRKYVFI-K 488
Query: 535 PFPLTSTGKIRRDEVR 550
P + GKI R +R
Sbjct: 489 EIPKSPVGKILRRNIR 504
>gi|167826369|ref|ZP_02457840.1| acyl-CoA synthetase [Burkholderia pseudomallei 9]
gi|226193138|ref|ZP_03788748.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
gi|225934738|gb|EEH30715.1| AMP-binding domain protein [Burkholderia pseudomallei Pakistan 9]
Length = 576
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 248/564 (43%), Gaps = 69/564 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R +VV T ++F +V LA L+++G+ GD V I + N +EW L A A
Sbjct: 47 RAAVVFREQGVRRTWREFADEVDALAAALIQLGIARGDRVGIWSPNRAEWLLTQ-FATAR 105
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE-----------------L 121
IG ++ +N + E A+ + +L+ E S Y E L
Sbjct: 106 IGAVLVNVNPAYRLAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVL 165
Query: 122 QHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+PSLR V++ ++ + ++ D+L S R + + I FTS
Sbjct: 166 CAARVPSLRTVVTMSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTS 225
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGAC 239
GTTGSPKG ++H ++ + + ++ E D PL H G+ S +A + GA
Sbjct: 226 GTTGSPKGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAK 285
Query: 240 HVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
VF FE + L AV T+L VP + +A L +++ + G
Sbjct: 286 MVFPGAAFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSP 343
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
P E MK +++ AYGMTETS P +F + T +S+
Sbjct: 344 CPIETMKRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLE 384
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ + VG+ PH+E K+ + V G + TRG VML YWD A+ + +
Sbjct: 385 K-RTTTVGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDG 442
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++
Sbjct: 443 WMRTGDLATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSK 502
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V A + LR ++ LR+ C + +K PR +V +
Sbjct: 503 YGEEVCAWIVLRAGETMTDDE----------------LREFC-SGQIAHYKVPR-YVRFV 544
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
P+T TGK+++ +R ++ L
Sbjct: 545 DELPMTVTGKVQKFVMRERMIDEL 568
>gi|196047047|ref|ZP_03114266.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB108]
gi|196022151|gb|EDX60839.1| putative feruloyl-CoA synthetase [Bacillus cereus 03BB108]
Length = 496
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 249/557 (44%), Gaps = 73/557 (13%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNS 67
I + + A + + + IT T +Q + V +A + E+ ++ G+ + I + NS
Sbjct: 4 IAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYFIYELNVKKGERIGILSQNS 63
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + A+A + I PLN R + E + +L +E+ + L +Q +
Sbjct: 64 LEYIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMQKVS-- 121
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+V + +T+ LK R + IIC+TSGTTG PK
Sbjct: 122 --------------YVQRVISITS--LKEIEDRKIDNFVEINESATFIICYTSGTTGKPK 165
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V++ + +L + D + PL HIGG+ A L G + KF
Sbjct: 166 GAVLTQENMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKF 225
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E AL +E+H VT ++ VP I L + + T SV+ NGG P ELM+E
Sbjct: 226 EPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETT--NLQSVRWFYNGGAPCPEELMRE 283
Query: 307 ATNSFPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + L +GMTETS ++ ++ D + +
Sbjct: 284 FID---RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------I 319
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGD 419
GKP + ++ + + VG +L RG +VM YW++ A + ++ G WL TGD
Sbjct: 320 GKPVLFCDYELIDENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDG--WLCTGD 377
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +
Sbjct: 378 LARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPI 437
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + K+ +L+ +V+ +HCR L +K P+ +++ K P
Sbjct: 438 AFI---------------VKKSSSVLIEKDVI-EHCR-LFLAKYKIPKE-IVFLKELPKN 479
Query: 540 STGKIRRDEVRREVMSH 556
+TGKI++ ++ ++ S
Sbjct: 480 ATGKIQKAQLVNQLKSR 496
>gi|377575599|ref|ZP_09804589.1| putative long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius
NBRC 104925]
gi|377535715|dbj|GAB49754.1| putative long-chain fatty-acid--CoA ligase [Mobilicoccus pelagius
NBRC 104925]
Length = 500
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 148/522 (28%), Positives = 229/522 (43%), Gaps = 81/522 (15%)
Query: 49 LLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVML 108
L G+R GD +A+S N + G IV PLN + +E + + +L
Sbjct: 43 LRSTGIRPGDRIALSLPNVPAFPIVYYGALAAGAIVMPLNPLFKPREVTYYLEDAGASLL 102
Query: 109 VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFT--H 166
V SD A S R +LG D++TAD P T
Sbjct: 103 VCLPDSD---------AETSAR---ALGV---------DVVTADAFSDLLAACEPDTRIE 141
Query: 167 SWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA---IVGYGEDDVYLHTAPLCH 223
++ +TSGTTG PKG + H L +QS ++ ++ EDDV + PL H
Sbjct: 142 DRDERDTAVLLYTSGTTGRPKGAELMH--LNLQSNQRVTGDVLIHATEDDVVMGCLPLFH 199
Query: 224 IGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV--K 280
+ G++ AM M VGA IP+FE AL+ + + VT VP + L +
Sbjct: 200 VFGMTCAMNMAFAVGATLTLIPRFEPAKALDMLRRDRVTVFFGVPTMYGALLAAAGALPE 259
Query: 281 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
T G D+++ ++GG +P ELM+ F ++ YG++E+S + +F
Sbjct: 260 GTDLGIDALRVCISGGASMPVELMRRFEARF-GCMILEGYGLSESSPAASFNQ------- 311
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC---------SDGSSHVGRILTRG 391
P++ +P VG P P VE+K+ S + +G I RG
Sbjct: 312 -------------PHAERKPG--SVGFPVPGVEMKLVPVAVEGDEGSAAAEGLGEIAIRG 356
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
++M YW+ A +V + W TGD+G +D+ G ++V R I GG NVYP EV
Sbjct: 357 ENIMRGYWNNPEATAAVLDEDGWFRTGDMGRVDEDGYYYIVDRAKDLIIRGGYNVYPREV 416
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL +HP + + VVG+ + + E V A V R + E L
Sbjct: 417 EEVLYEHPAVAEVAVVGMTHEQYGEEVGAYVVARAGHS----------------IDVEEL 460
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
R+ +E+ + +K PR+ + + P +TGKI + E+ R+V
Sbjct: 461 REFAKER-VAAYKYPRVIRILEE-LPKGATGKILKRELPRDV 500
>gi|300790301|ref|YP_003770592.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|384153828|ref|YP_005536644.1| AMP-binding protein [Amycolatopsis mediterranei S699]
gi|399542181|ref|YP_006554843.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
gi|299799815|gb|ADJ50190.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei U32]
gi|340531982|gb|AEK47187.1| AMP-binding domain protein [Amycolatopsis mediterranei S699]
gi|398322951|gb|AFO81898.1| fatty-acyl-CoA synthase [Amycolatopsis mediterranei S699]
Length = 552
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 243/552 (44%), Gaps = 63/552 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW-YLEWILAVA 78
R+++V T R T ++ +V LA GL+ G+ GD V I + N +EW +L++ A A
Sbjct: 38 RDALVDRTAGRRWTYRELAAEVTALALGLVAQGIGKGDRVGIWSPNRAEWTFLQY--ATA 95
Query: 79 FIGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ---HTAIPSLRWHV 133
IG I+ +N YR E IR +++ +D+ S Y + +L V
Sbjct: 96 KIGAILVNINPAYRAHELEYVLNQAGIR-LLVASDKFKTSDYPAMADEVREKCAALEQVV 154
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
LG L A G + + + + I +TSGTTG PKG +SH
Sbjct: 155 ILGGEG------WQALLAAGRGGDPAQLAHLQAGLSADDPINIQYTSGTTGFPKGATLSH 208
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ + Y E D P H G+ +A GAC V P F+ ++
Sbjct: 209 HNILNNGFFVGELCNYTEHDKVCIPVPFYHCFGMVMGNLACTSHGACMVIPAPAFDPRAT 268
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAV TSL VP + +A L S++ + G P E+MK+ +
Sbjct: 269 LEAVAAERCTSLYGVPTMF--IAELNHPDFGEFDLTSLRTGIMAGSPCPVEVMKQVIDRM 326
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A++ YGMTETS T T D ++E + VG+ PH
Sbjct: 327 GMAEVSICYGMTETSPVST-QTRSDDSIER-------------------RVSTVGRVGPH 366
Query: 372 VELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV + G + TRG VML YW+Q W+ TGD+ +D
Sbjct: 367 LEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQPDKTAEAIDAARWMHTGDLAVMDG 426
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VR+R
Sbjct: 427 DGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRMR 486
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ L++E +R+ C K L +K PR +V FP+T TGK+R
Sbjct: 487 QGAS---------------PLTAEKVREFCSGK-LAHYKIPR-YVHVVDEFPMTVTGKVR 529
Query: 546 RDEVRREVMSHL 557
+ E+R + +S L
Sbjct: 530 KVEMREKSISLL 541
>gi|254184020|ref|ZP_04890611.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
gi|184214552|gb|EDU11595.1| AMP-binding domain protein [Burkholderia pseudomallei 1655]
Length = 570
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 54 TWREFADEVDALAAALIELGIARGDRVGIWSPNRTEWLLTQ-FATARIGAVLVNVNPAYR 112
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 113 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 172
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 173 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 232
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 233 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGAT 292
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 293 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 350
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 351 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 390
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 391 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 449
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 450 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 509
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 510 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 551
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 552 FVMRERMIDEL 562
>gi|383315473|ref|YP_005376315.1| acyl-CoA synthetase [Frateuria aurantia DSM 6220]
gi|379042577|gb|AFC84633.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Frateuria
aurantia DSM 6220]
Length = 569
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 161/575 (28%), Positives = 249/575 (43%), Gaps = 72/575 (12%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW 69
L R+A +R ++V +QF +V ++A GLL +GL G+ + I A N +EW
Sbjct: 31 LRRVAQTFPQRPALVVCDQQVRMNYRQFDAEVQHVAAGLLALGLEPGERIGIWAPNRAEW 90
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVML---------------VTDE 112
L A A G I+ +N + E AI + R ++L + E
Sbjct: 91 VL-LQFATARAGLILVNINPAYRAHELEYAINKVGCRALVLPRRFKSSHYLQILDDLIPE 149
Query: 113 SSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 172
+S ELQ +P+LR + L + + L + R +
Sbjct: 150 RHESRPGELQSRRLPALRELILLDEQPEPGMRRWSELRVLADEAALSRLAEVESGLDFDD 209
Query: 173 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAM 231
V I FTSGTTG+PKG ++H ++ + E D P H G+ M
Sbjct: 210 PVNIQFTSGTTGAPKGATLTHHNIVNNGFFIGEAMQLTEADRLCIPVPFYHCFGMVLGNM 269
Query: 232 AMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 289
A + GAC V IP F+ + L+AV T+L VP + +A L + S+
Sbjct: 270 AAVTHGACMV-IPGEGFDVLATLQAVAAERCTALHGVPTMF--IAELEHPRFHEFDLSSL 326
Query: 290 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 349
+ + G P E+M+ N + AYGMTETS P +F
Sbjct: 327 RTGIMAGSTCPIEVMRRVVNEMHMRDITIAYGMTETS-------------------PVSF 367
Query: 350 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFL 403
++ + + + + VG+ PH+E+K+ D H+ G + TRG VML YWD +
Sbjct: 368 QSIPADPLAR-RVESVGRVHPHLEVKLV-DELGHIVPRGVPGELCTRGYSVMLGYWDDRI 425
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
W+ TGD+ +DD G +VGR I GGEN+YP E+E L HP I
Sbjct: 426 RTAEAIDRGGWMHTGDLAVLDDEGYARIVGRLKDMIIRGGENIYPREIEEFLYTHPAIKD 485
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
+ + G+A+ R E V A ++LRE C S E L+ +CR +++ +
Sbjct: 486 VQIFGVADQRFGEQVCAWIQLRE-------GCTT---------SVEELQHYCR-RHIAYY 528
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
K P + + FP+T TGK+++ +R + LK
Sbjct: 529 KVPH-HIRFVDSFPMTVTGKVQKYLMRETMERELK 562
>gi|170585217|ref|XP_001897382.1| AMP-binding enzyme family protein [Brugia malayi]
gi|158595208|gb|EDP33778.1| AMP-binding enzyme family protein [Brugia malayi]
Length = 631
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 240/542 (44%), Gaps = 76/542 (14%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWI---LAVAFIGGIVAPLNYRWSFKEASRAI 100
LA GLL +GL GD V + N EWI A A G I+ +N + +E A+
Sbjct: 93 KLATGLLHLGLNRGDRVGMWGPN---LYEWIVCQFATALAGMILVNINPSYQSEELKFAL 149
Query: 101 TSIRPVMLVTDES--SDSWYLELQHTAIPSLRWHVS-LGSSSSDFVNKRDMLT------- 150
+ L++ S ++YL + IP L G S+D+ K L
Sbjct: 150 GKVGIKALISPASFKKSNYYLSMV-DVIPDLAVKAEGKGDVSADYFPKFRHLIIIDRNDD 208
Query: 151 ----------ADILKGYS----LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+D++K + L+ P+ V I +TSGTTG PKG ++H +
Sbjct: 209 NKSYRGAWRYSDVIKMGTEEDRLKLADIERQIQPDDPVNIQYTSGTTGQPKGATLTHHNV 268
Query: 197 IVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG--LSSAMAMLMVGACHVFIPKFESKSALE 253
+ + GY E + PL H G + S A + + C P F++ +AL+
Sbjct: 269 VNNAYFVGRRAGYNEKRTIICIPNPLYHCFGCVMGSLSACVHLQTCVFPAPSFDALAALQ 328
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
A+ + T++ P + D+ + K+ S+ G P L + +
Sbjct: 329 AIHEERCTAVYGTPTMYIDMLNHPQYKQY--DCTSITSGFVAGAPCPIALCQRLVSELGM 386
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN---SVHQPQGVCVGKPAP 370
L YG TETS ++FM+L D E P + ++ G + + +V +G+ + +
Sbjct: 387 RDLQVCYGTTETSP-VSFMSLRD---EQPEERIKSVGYIMDHLESAVVDSEGIILPR--- 439
Query: 371 HVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
G +L RG VM YW+ T + W TGDIG I + G++
Sbjct: 440 -----------GERGEVLVRGYSVMKYYWNNERQTKEEITADRWYHTGDIGVIHENGSLS 488
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+VGR+ I GGEN+YP E+E L +HP I + VVG+ + R E+V A +RLR+S
Sbjct: 489 IVGRKKDMIVRGGENIYPLEIEQYLFRHPKIEDVQVVGVPDERYGEVVCAWIRLRDSAG- 547
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK--PFPLTSTGKIRRDE 548
++ E +R C+ + + FK PR ++L++K FPLT TGKI++ E
Sbjct: 548 --------------DITEEDIRDFCKGR-IAHFKIPR-YILFKKENEFPLTVTGKIKKYE 591
Query: 549 VR 550
+R
Sbjct: 592 IR 593
>gi|334145353|ref|YP_004538563.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
gi|333937237|emb|CCA90596.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
Length = 552
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 153/537 (28%), Positives = 226/537 (42%), Gaps = 55/537 (10%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q+ ++V +A GLL G+R GD V I A N + A A IG I+ +N +
Sbjct: 47 TWQELDEEVDRIATGLLRRGVRKGDRVGIWAPNCAEWTVIQFATARIGAILVNINPAYRL 106
Query: 94 KEASRAITSIRPVMLVTD---ESSD--SWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDM 148
E A+ + MLVT +SSD + EL +P+LR VSLG D
Sbjct: 107 SEVEYALNKVGCSMLVTAARFKSSDYIAMLRELGDARLPTLRHLVSLGEERFDGFEPWPD 166
Query: 149 LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG 208
L D G + A+ I FTSGTTG PKG ++H ++ +
Sbjct: 167 LREDPEAGLLALADAALDR---NDAINIQFTSGTTGFPKGATLTHRNILNNGYFAGRTIH 223
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITV 266
+D PL H G+ +A L GA V+ + F+ L A + T+L V
Sbjct: 224 LSPEDRICVPVPLYHCFGMVLGNLAALTSGAAMVYPDEAFDPGKVLAAATREGCTALYGV 283
Query: 267 PAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
P + +A L S++ + G P LM+ ++ YGMTETS
Sbjct: 284 PTMF--IAMLNHPGFDAFDVSSLRTGIMAGATCPVSLMRNVMGRLNMREVTIGYGMTETS 341
Query: 327 SSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS--- 382
T DP E + VG+ PH E ++ DG +
Sbjct: 342 PLTTQTATDDPVEE--------------------RVASVGRVHPHAEARIIGLDGQTLPI 381
Query: 383 -HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKS 441
G +RG VML YW+ E W+ +GD+ +D G V + GR I
Sbjct: 382 GEQGEYCSRGYAVMLGYWEDPERTAEAIDAEGWMHSGDLAVMDADGYVRITGRIKDMIIR 441
Query: 442 GGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKN 501
GGEN+YP E+E LL HP I+ V G+ + + E V A W + + D
Sbjct: 442 GGENIYPREIEEFLLTHPQILDAQVFGVDDEKFGEEVCA-------WIIARPDAD----- 489
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
LS++ + HCR + + FK PR ++ + + F +T TGK ++ +R+ + LK
Sbjct: 490 ----LSTQCVLDHCRGR-IAHFKVPR-YIRFVERFEMTVTGKAQKFAMRKIMEDELK 540
>gi|390463546|ref|XP_002748483.2| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Callithrix jacchus]
Length = 704
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 155/589 (26%), Positives = 259/589 (43%), Gaps = 93/589 (15%)
Query: 11 QCLSRIA--AVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
QCL A +R ++V + N T Q ++V A GLL IGL GD + + NS
Sbjct: 165 QCLEATAQRVPEREALVVLHENVRLTFAQLKEEVDKAASGLLSIGLCKGDRLGMWGPNSY 224
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLELQHTA- 125
++ LA A G I+ +N + E + + + ++ + +Y L+
Sbjct: 225 AWVLMQLATAHAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKTQQYYNILKQICP 284
Query: 126 --------------IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-AP 170
+P L +S+ + + +++ A + + L L +T + +
Sbjct: 285 EVENAQPGALKSQRLPDLTIAISVDAPLPGTLLLDEVVAAGSTQQH-LDQLQYTQQFLSC 343
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------A 219
+ I FTSGTTGSPKG +SH ++ S +++G + + LH +
Sbjct: 344 HDPINIQFTSGTTGSPKGATLSHYNIVNNS----SLIG---ERLKLHEKTPENLRMVLPS 396
Query: 220 PLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLI 277
PL H +G + M LM GA + P F K ALEA+ L P + D+
Sbjct: 397 PLYHCLGSVGGTMVCLMYGATLILSSPIFNGKKALEAISTERGCFLYGTPTMFVDILN-- 454
Query: 278 RVKKTWKGRDSVKKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
+ + D + + G G P EL++ + +L+SAYG TE +S +TFM+
Sbjct: 455 --QPNFSSYD-ISTVYGGVIAGSPAPPELIRAIIDKINMKELVSAYGTTE-NSPVTFMSF 510
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRIL 388
+ T+E + VG+ PH E ++ + + + G +
Sbjct: 511 PEDTVEQKAE-------------------SVGRVMPHTEARIMNMEAGTLAELNTPGELF 551
Query: 389 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG VML YW + V + W TGDI +D+ G +VGR I GGEN+YP
Sbjct: 552 IRGYCVMLGYWGEPQKTEEVVGQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYP 611
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E+E HP + + VVG+ + R+ E + AC+RL KN E
Sbjct: 612 VELEDFFHTHPKVQEVQVVGVKDYRMGEEICACIRL---------------KNGEKTTPE 656
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E+ + C+ K ++ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 657 EI-KAFCKGK-ISHFKIPR-YIVFVTDYPLTVSGKVQKFKLREQMERHL 702
>gi|238025755|ref|YP_002909986.1| AMP-binding domain-containing protein [Burkholderia glumae BGR1]
gi|237874949|gb|ACR27282.1| AMP-binding domain protein [Burkholderia glumae BGR1]
Length = 590
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 254/563 (45%), Gaps = 92/563 (16%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWS 92
++F +V LA L+ +G+ G+ V I A N +EW+L A A IG I+ +N +
Sbjct: 71 REFGDEVDALAAALVALGIAPGERVGIWAPNR---VEWLLTQFATARIGAILVNINPAYR 127
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLELQHT----------------AIPSLRWHVSL 135
E A+ + L+ ES S Y ++ T +PSLR VS+
Sbjct: 128 LAELEYALNQVGCKALIAAESFKSSHYTQMLRTLLPEVDSQAPGALRCARVPSLRAIVSM 187
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLP----FTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ + + + D + A +G +LR+ A + I FTSGTTGSPKG +
Sbjct: 188 SAQAPAGMFRFDEVLA---RGRTLRARAALDVLGAGLAQTDPINIQFTSGTTGSPKGATL 244
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESK 249
+H ++ ++A ++ G D PL H G+ +A+A + GA VF F+
Sbjct: 245 THRNIVNNAIAIAGVMHLGAHDALCIPVPLYHCFGMVLAALACVSAGAKMVFPGAAFDPL 304
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG---GGGLPSELMKE 306
+ LEAV+ T+L VP + + + GR ++ + G G P E+M+
Sbjct: 305 ATLEAVQAERCTALHGVPTMF-----IAELDHPEFGRFDLRTLRTGIMAGSPCPIEIMRR 359
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A++ AYGMTETS P +F + T +S+ + + VG
Sbjct: 360 VVAEMHMAEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVG 399
Query: 367 KPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-------DQFLAKPSVSTGEVW 414
+ PH+E K+ + V G + TRG VM YW L + ++ G W
Sbjct: 400 RIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMSGYWCDGAGDGGDALTRAAIVDG--W 457
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ TGD+ + D+ G +VGR + GGEN+YP E+E L +HP I V G+ +A+
Sbjct: 458 MHTGDLATFDEEGFCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSAQVFGVPDAKY 517
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A V LR L +E LR+ CR + + +K PR +V + +
Sbjct: 518 GEEVCAWVVLRAGET----------------LDAEALREFCRGQ-IAHYKVPR-YVRFVE 559
Query: 535 PFPLTSTGKIRRDEVRREVMSHL 557
P+T TGK+++ +R ++ L
Sbjct: 560 ALPMTVTGKVQKFVMREAMIDEL 582
>gi|381210101|ref|ZP_09917172.1| AMP-binding domain protein [Lentibacillus sp. Grbi]
Length = 544
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 242/554 (43%), Gaps = 64/554 (11%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNY 89
N T Q+F + V A+G + +G+ G+ VAI A N ++ A +G ++ +N
Sbjct: 31 NLRKTYQEFNEMVNQAAKGFMSLGIEKGENVAIWADNKPEWITSQFATGKMGAVLVTVNT 90
Query: 90 RWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIPSLRWHVS--LGSSSSDFVNKR 146
+ KE + L+ E+ + Y+++ P V L S F+
Sbjct: 91 NYQAKELEYLLKQSESTTLILAETYKGTSYIDILRQICPEFDQSVKGILKSEKLPFLKNI 150
Query: 147 DMLTAD-----------ILKGYSLRSLPFTH---SWAPEGAVIICFTSGTTGSPKGVVIS 192
+L+ D + KG ++ S + + + +TSGTTG PKGV+++
Sbjct: 151 IVLSDDDYANAYTWNDVMEKGKTVSDEELGQRKASLDSKEVINMQYTSGTTGFPKGVMLT 210
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSA 251
H ++ + +D P H G + +A + G V + +F+ +
Sbjct: 211 HHNIVNNGNQIADCMKLTHEDRLCIPVPFFHCFGCVLGILAAVSKGTTMVLLEQFDPEKV 270
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
++AV + T L VP + +A L + ++ + G P E+MK+ N
Sbjct: 271 MKAVSEEKCTGLHGVPTMF--IAELNHPNFSTYDFSHLRTGIMAGSTCPIEVMKDVMNKM 328
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ AYG TE+S DP + + VGK P+
Sbjct: 329 GATEITIAYGQTESSPVFLQTRTDDPV--------------------EVKATTVGKVHPN 368
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
VE+K+ G+ G + TRG HVM Y++ A + + WL TGD+ +D+
Sbjct: 369 VEVKIIVPGTEQEQVQGEPGELCTRGYHVMKGYYNNQEATDAAIDRDGWLHTGDLAVMDE 428
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + GR I GGEN+YP EVE L QHP ++ + VVGI + + E ++A + L+
Sbjct: 429 NGYFQITGRMKDMIIRGGENIYPREVEKFLYQHPDVLDVQVVGIPDKKYGEELMAWIILK 488
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ WS + + E +R C E N++ K P+ ++ + +P+T++GKI+
Sbjct: 489 D---WSNA-------------TEEDIRSFC-EGNISRHKIPK-YIKFTAEYPMTASGKIQ 530
Query: 546 RDEVRREVMSHLKS 559
+ ++R + ++ ++
Sbjct: 531 KFKLREQAVAEVRQ 544
>gi|307731457|ref|YP_003908681.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
gi|307585992|gb|ADN59390.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1003]
Length = 576
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 156/559 (27%), Positives = 252/559 (45%), Gaps = 84/559 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T ++F ++V LA G L +G+ GD V I + N +EW+L A A IG ++ +N
Sbjct: 61 TWKEFAEEVDVLAAGFLALGIVKGDRVGIWSPNR---VEWLLTQFATARIGAVLVNINPA 117
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLE-LQHTA---------------IPSLRWHV 133
+ E A+ + +V E S YLE LQ A +P LR+ +
Sbjct: 118 YRLAELEYALNKVGCKAIVAAERFKTSMYLEMLQQLAPELATHAPGELHAARLPELRYVI 177
Query: 134 SL------GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+ G S V +R T D+ K ++ + H + I FTSGTTG+PK
Sbjct: 178 RMCDTETPGMLSFSDVIERGRATLDVAKLDAIAATLSCHE-----PINIQFTSGTTGNPK 232
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK- 245
G ++HS ++ + + E D PL H G+ A +A + VGA VF +
Sbjct: 233 GATLTHSNVVNNARYIAMAMNLSEQDALCIPVPLYHCFGMVLAVLACVSVGANMVFPGEG 292
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + L AV + T+L VP + +A L ++ + G P E MK
Sbjct: 293 FDPAATLAAVAEEKCTALHGVPTMF--IAELDHPDFASYDLSRLRTGIMAGSPCPIETMK 350
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ + +++ AYGMTETS P +F + T + + + + V
Sbjct: 351 KVVSRMHLSEITIAYGMTETS-------------------PVSFQSSTTDPLDK-RTTTV 390
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGD 419
G+ PH+E+K+ + +G + TRG VM YW D+ + SV G W+ TGD
Sbjct: 391 GRIQPHLEVKIIDSLGNVVPVGEIGELCTRGYSVMQGYWGDEEKTRESVVDG--WMHTGD 448
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ ++D G +VGR + GGENVYP E+E L +HP I + V G+ +A+ E V
Sbjct: 449 LATLDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDAKYGEEVC 508
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V L ++E ++Q C + +K P+ ++ + P+T
Sbjct: 509 AWVVLHAGEH----------------ATAEEIQQFCH-GQIAHYKVPK-YIRFVDELPMT 550
Query: 540 STGKIRRDEVRREVMSHLK 558
TGK+++ +R+ ++ LK
Sbjct: 551 VTGKVQKFVMRQRMIDELK 569
>gi|53724018|ref|YP_104464.1| AMP-binding protein [Burkholderia mallei ATCC 23344]
gi|121601336|ref|YP_994632.1| AMP-binding protein [Burkholderia mallei SAVP1]
gi|126448872|ref|YP_001082538.1| AMP-binding protein [Burkholderia mallei NCTC 10247]
gi|167000139|ref|ZP_02265962.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
gi|52427441|gb|AAU48034.1| AMP-binding enzyme domain protein [Burkholderia mallei ATCC 23344]
gi|121230146|gb|ABM52664.1| AMP-binding enzyme domain protein [Burkholderia mallei SAVP1]
gi|126241742|gb|ABO04835.1| AMP-binding enzyme domain protein [Burkholderia mallei NCTC 10247]
gi|243063942|gb|EES46128.1| AMP-binding domain protein [Burkholderia mallei PRL-20]
Length = 576
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 179 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 239 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 516 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|76811858|ref|YP_331592.1| AMP-binding protein [Burkholderia pseudomallei 1710b]
gi|167818006|ref|ZP_02449686.1| acyl-CoA synthetase [Burkholderia pseudomallei 91]
gi|254258460|ref|ZP_04949514.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|418542357|ref|ZP_13107796.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|418548842|ref|ZP_13113940.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
gi|76581311|gb|ABA50786.1| AMP-binding enzyme domain protein [Burkholderia pseudomallei 1710b]
gi|254217149|gb|EET06533.1| AMP-binding domain protein [Burkholderia pseudomallei 1710a]
gi|385355749|gb|EIF61910.1| AMP-binding domain protein [Burkholderia pseudomallei 1258a]
gi|385357060|gb|EIF63139.1| AMP-binding domain protein [Burkholderia pseudomallei 1258b]
Length = 576
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 179 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 239 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGARMVFPGAAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 516 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|325675420|ref|ZP_08155104.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
gi|325553391|gb|EGD23069.1| substrate-CoA ligase [Rhodococcus equi ATCC 33707]
Length = 550
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 157/552 (28%), Positives = 238/552 (43%), Gaps = 72/552 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R++++ R T ++ ++V LA GLL G+ GD V I A N +EW + A A
Sbjct: 40 DRDALIDRGSGRRWTYRELAREVDALATGLLGTGITKGDRVGIWAPNCAEWTMVQ-YATA 98
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP---SLRWHVS 134
IG I+ +N + E + ML+ + S Y + P +L +
Sbjct: 99 KIGAILVNINPAYRSHELEYVLDQAGIRMLIAAPAFKTSDYAAMIEQVRPERAALEHVLL 158
Query: 135 LGSSSSDFV--NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
LGS D + + R L AD + R+ + + + + I +TSGTTG PKG +S
Sbjct: 159 LGSERWDRLLDDGRAALEAD--RAALDRA---QGALSADDPINIQYTSGTTGFPKGATLS 213
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL--------SSAMAMLMVGACHVFIP 244
H ++ + GY E D P H G+ S AM++ G P
Sbjct: 214 HHNILNNGYFVGELCGYTEHDRVCIPVPFYHCFGMVMGNLACTSHGAAMVIPG------P 267
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
FE + L AV+ TSL VP + +A L ++ + G P E+M
Sbjct: 268 AFEPAATLAAVQAERCTSLYGVPTMF--IAELADPDFDSYDLSCLRTGIMAGSPCPVEVM 325
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K+ A++ YGMTETS P + +S+ Q +
Sbjct: 326 KQVIERMGMAEVSICYGMTETS-------------------PVSLQTRRDDSIDQ-RVST 365
Query: 365 VGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
VG+ PH+E+K+ + G + TRG VML YW+ W+ TG
Sbjct: 366 VGRVGPHLEVKIVDPATGLTVPRGEAGELCTRGYSVMLGYWNNPEKTSEAIDSARWMHTG 425
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
DIG +D G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E +
Sbjct: 426 DIGVMDSDGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEEL 485
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
+ +R+RE Q L + +R+ C + L +K PR +V FP+
Sbjct: 486 MVWIRMREGAQ---------------PLDVDKVREFCTGR-LAHYKIPR-YVHLVDEFPM 528
Query: 539 TSTGKIRRDEVR 550
T TGKIR+ E+R
Sbjct: 529 TVTGKIRKVEMR 540
>gi|429207667|ref|ZP_19198924.1| Long-chain-fatty-acid--CoA ligase [Rhodobacter sp. AKP1]
gi|428189431|gb|EKX57986.1| Long-chain-fatty-acid--CoA ligase [Rhodobacter sp. AKP1]
Length = 520
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 237/546 (43%), Gaps = 63/546 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+S I R + +F D+ + +GL G+R G VA+ NS+ Y+ A+A +G
Sbjct: 25 DSAALIFRGRTRSWAEFAADMARIQQGLAARGVRRGSRVAVLDRNSDDYVLLGYALAGMG 84
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD 141
++AP+N E + + +P++LVT +LE AI L +L +
Sbjct: 85 AVLAPVNMWLRPAELGYILGNCQPLLLVTSAE----FLEAAREAIAPLADPPALVLRGEE 140
Query: 142 FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
+ A+I G + SW + ++ +TSGTTG PKG +ISH ++ +L
Sbjct: 141 APGT--IPWAEIAAGEGRAPVSRPESW--DDPHLVLYTSGTTGRPKGALISHRRTVLDAL 196
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVT 261
A + + G G+ + + PL H G M V +FE+ +A+ +E H
Sbjct: 197 AALPVFGIGQHERFFCYMPLFHTGAWDYLKLYFMRRGAAVIAERFEADAAVAEIEAHRCN 256
Query: 262 SLITVPAIMADLATLIRVKKTWKGRD-SVKKILNGGGGLPSELMKEATNSFPKA-----K 315
+ VP ++ + + W D S +++ PS L+ +F + +
Sbjct: 257 GMFGVPLVLRQMVE----SQAWGTSDMSSMRLIAYANYDPSALILRIVEAFRERGAEGLR 312
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ +AYG+TE + N ++ +P + +G+P P V++
Sbjct: 313 IANAYGLTEGGPYICI-------------------NRPETAMGKP--LSIGQPVPGVQVA 351
Query: 376 VCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
+ + V G I RG +M Y ++ A G WL TGD+G +D+ G V
Sbjct: 352 LLDEDLREVPPGALGEICVRGPALMSGYLNRPEATAEAFAGG-WLHTGDLGRVDEEGFVH 410
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
LV R+ I++GGENV+ +EVE L+ HP I VVG+ + +
Sbjct: 411 LVDRKKDMIRTGGENVFAKEVEQTLVTHPAIRDCAVVGLPDD----------------DY 454
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E L+ +R R++ L GFKAPR V++ P T GKI++ EVR
Sbjct: 455 GERVVAVVVAEPGTDLAEAEVRSFVRDR-LAGFKAPRQ-VIFVPELPKTPAGKIKKHEVR 512
Query: 551 REVMSH 556
+ + +
Sbjct: 513 KAIAAE 518
>gi|423454572|ref|ZP_17431425.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X1-1]
gi|401135541|gb|EJQ43138.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG5X1-1]
Length = 496
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 247/552 (44%), Gaps = 73/552 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ ++ ++ G+ VAI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAVITEEEEITYKQLHEYVSKVAAYLICDLNMKKGERVAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ +
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQN--------------- 112
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++L +V + +L+ LK RS + + IIC+TSGTTG+PKG V+
Sbjct: 113 -IALSMEKESYVQR--VLSIKNLKRIENRSNHYFEDINENASFIICYTSGTTGTPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE +
Sbjct: 170 TQKNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIIPRKFEPIT 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E+H VT ++ VP I L + + T SV+ NGG P EL++E +
Sbjct: 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFEST--NLQSVRWFYNGGAPCPEELIREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
+ V DG+ + VG ++ RG +VM YW++ A G WL TGD+ +
Sbjct: 324 LFCDY-VLIDGNKNKVEVGEVGELIIRGPNVMKEYWNRPDATEETIQGG-WLHTGDLAKV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A V
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINRLSDVCEVAVVGTQHLQWGEIPIAFV- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L EV+ +HC L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSSSVLTEKEVI-EHCL-LFLAKYKIPKEIVFLEE-LPKNATGK 483
Query: 544 IRRDEVRREVMS 555
I++ ++ ++ S
Sbjct: 484 IQKVQLANQLKS 495
>gi|386393186|ref|ZP_10077967.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
sp. U5L]
gi|385734064|gb|EIG54262.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfovibrio
sp. U5L]
Length = 557
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 250/556 (44%), Gaps = 68/556 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+++VV + + T +QF + LA+GL+ +G++ G+ V + A N +++ + A A +
Sbjct: 32 QDAVVYVDRDYRLTWRQFDELTDELAKGLMALGIQKGEKVGVWATNVPFWVALMFATAKM 91
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G + +N + E +T S + + + DS Y+E+ + P LR S
Sbjct: 92 GAWLLTVNTAYKRNELKYLMTNSEAENIFIINGFRDSDYIEILYDLAPELRTMQRGAVKS 151
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWA---------PEGAVIIC-------FTSGTT 183
F + + + + K + S+P A A C +TSGTT
Sbjct: 152 ETFPHLKRVCFLGVEKHRGMYSIPEILGLARTVSDEDLRARQATFTCHDVVNMQYTSGTT 211
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF 242
G PKGV++SH ++ + + E D PL H G + + MA + G VF
Sbjct: 212 GFPKGVMLSHHNIVNNGYSIGQRQRFTEKDKLCIQVPLFHCFGCVLAVMACVNHGTSMVF 271
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLP 300
F ++ ++EQ T++ VP + + K + D S++ + G P
Sbjct: 272 TEVFNPVHSMMSIEQEQCTAVYGVPTMFIAMLE----HKLFPKFDFSSLRTGIMAGAVCP 327
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+ M++ T ++ S YG+TE+S +T + DP ++
Sbjct: 328 IQTMRQVTEKMYMREVTSVYGLTESSPGMTQTDVTDPFH------------------YRV 369
Query: 361 QGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+GV G+ PHVE+KV +S G + RG + M Y++ A + W
Sbjct: 370 EGV--GRAFPHVEVKVADPETSAEVARGKQGELCCRGYNAMKGYYNNPEATAKCIDADGW 427
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
L +GD+G +D+ G V + GR I GGEN+YP E+E L PGI + V G+ + +
Sbjct: 428 LHSGDLGVMDEYGYVAITGRIKDMIIRGGENIYPREIEEYLYTMPGIADVQVAGVPSRKY 487
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E V A + LR K++ ++ E +R +CR + + K P+ ++ + K
Sbjct: 488 GEEVGAFIILR----------------KDVEMAPEEVRDYCRGQ-IAWHKIPK-YIAFVK 529
Query: 535 PFPLTSTGKIRRDEVR 550
FPLT++GK+++ ++R
Sbjct: 530 EFPLTTSGKVQKYKLR 545
>gi|323487936|ref|ZP_08093192.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
gi|323398360|gb|EGA91150.1| AMP-binding domain protein [Planococcus donghaensis MPA1U2]
Length = 547
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 246/555 (44%), Gaps = 78/555 (14%)
Query: 33 NTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA+ + IG+ + +AI + N +L A +GG++ +N +
Sbjct: 34 KTYKEFDEETDRLAKAFMGIGIEKREHIAIWSDNKREWLLSQFATGKMGGVLVTVNTSYQ 93
Query: 93 FKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-KRDMLT 150
E + S +++ +E + Y+++ +T P L+ +SS + KR ++
Sbjct: 94 SSELEYLLKQSDATTLILGEEFKGTSYIDILNTVCPELKTAKKGAVNSSKLPHFKRVIVM 153
Query: 151 ADILKGYSLRSLPFTHSWA----------------------PEGAVIICFTSGTTGSPKG 188
+D + P ++W+ P+ + I +TSGTTG PKG
Sbjct: 154 SD-------NNYPGIYTWSEFEAFAESVSDAEFEERFDSMNPDDVINIQYTSGTTGFPKG 206
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFE 247
V+++H ++ + E D P H G + MA + V +FE
Sbjct: 207 VMLTHLNVVNNGKLVGDTMALTEKDRLCIPVPFFHCFGCVLGTMAAVTHSTTMVIAEQFE 266
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
K L+ V+ T L VP + +A L + + +++ + G P E+MK+
Sbjct: 267 PKRVLQMVQDEKCTGLHGVPTMF--IAELNHPEFSTFDTSTLRTGIMAGSSCPIEVMKKV 324
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
N +++ AYG TE+S +T T D +E + VGK
Sbjct: 325 INEMGASEITIAYGQTESSPVIT-QTRADDDIEK-------------------RVSTVGK 364
Query: 368 PAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
P VE+K+ + G + TRG HVM Y+ A E WL TGDI
Sbjct: 365 PHAGVEVKIIDPATGDEVELGLPGELCTRGYHVMSGYYKNEDATKMAIDSEGWLHTGDIA 424
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
D+ G + + GR + GGEN+YP E+E L QHP ++ + V+G+ + + E ++A
Sbjct: 425 VEDEEGYIDITGRIKDMVIRGGENIYPREIEEFLYQHPSVLDVQVIGVPDPKYGEELMAW 484
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
+ L+E Q L++E LR +C+ K ++ K PR ++ + K +P+T++
Sbjct: 485 IILKEGEQ----------------LNAEELRTYCKGK-ISHHKIPR-YIEFTKEYPMTAS 526
Query: 542 GKIRRDEVRREVMSH 556
GKI++ ++R + H
Sbjct: 527 GKIQKFKLRELSIEH 541
>gi|374628530|ref|ZP_09700915.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
gi|373906643|gb|EHQ34747.1| AMP-dependent synthetase and ligase [Methanoplanus limicola DSM
2279]
Length = 566
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 259/594 (43%), Gaps = 88/594 (14%)
Query: 1 MANYSQAH-----------ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLAR 47
MAN S A+ I + L RI+ ++V++ N T +F++ V +A
Sbjct: 1 MANISYANGTSSIPLIGETIGEMLERISNTYPDNEALVSVDQNIRWTYSEFLKKVDEVAL 60
Query: 48 GLLEIGLRSGDIVAISALNSEWYLEWI---LAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
L+ IG+ GD VAI ALN Y EWI A A G I+ +N + E A+
Sbjct: 61 SLMAIGVNKGDRVAIWALN---YAEWIVVQFATARCGAIMVNINPAYRTFELEYALKQAE 117
Query: 105 PVMLVTD---ESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRD-----------MLT 150
L+ +SSD Y+ + + A P + S+ F R+ M T
Sbjct: 118 VNTLILQGRFKSSD--YVGMLYEACPEVIESRPGKISTEKFPFLRNVIFLGDVPYNGMFT 175
Query: 151 AD--ILKGYSLRSLPFT---HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 205
D I KG ++ T +S + + + I +TSGTTG PKGVV++H ++
Sbjct: 176 WDEFIAKGKNISRDELTERGNSLSFDDPINIQYTSGTTGYPKGVVLTHHNVLNNGYTIGN 235
Query: 206 IVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSL 263
+ + E D P H G+ S +A + G V P F+ ++ L +++ T++
Sbjct: 236 GMKFTEKDRLCIPVPFYHCFGMVLSNLACVTHGTTMVIPSPAFDPEAVLRTIDKEKCTAV 295
Query: 264 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VP + +A L DS++ + G P E+MK ++ YG T
Sbjct: 296 HGVPTMF--IAELKHPNFNKYKYDSLRTGIMAGSPCPIEVMKAVNQKMNMRDIVIVYGQT 353
Query: 324 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 383
ETS +T T DP + + VG+ PHVE+K+ +
Sbjct: 354 ETSPGVTMTTTDDPI--------------------EMRVSTVGRTFPHVEIKIVDPVTQK 393
Query: 384 V------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 437
+ G I RG VM Y++ A + W TGD+G +D G V +VGR
Sbjct: 394 IVLRGEPGEICARGYVVMKCYYNNPSATRQTIDADKWNHTGDLGIMDGEGFVKIVGRLKE 453
Query: 438 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 497
+ GGEN+YP E+E L +P ++ V+G+ + + E ++A V+L E
Sbjct: 454 MVIRGGENIYPREIEEFLHTNPKVLDAYVIGVPDEKYGEELMAWVKLHEG---------- 503
Query: 498 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
L ++ E L++ C + + +K P+ +V + FP+T +GKIR+ E+R
Sbjct: 504 ------LTMAGEELKEFC-DGQIARYKIPK-YVKFVDDFPMTVSGKIRKGEMRE 549
>gi|410456819|ref|ZP_11310673.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
gi|409927371|gb|EKN64508.1| AMP-dependent synthetase and ligase [Bacillus bataviensis LMG
21833]
Length = 493
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 241/541 (44%), Gaps = 84/541 (15%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGG 82
+V+ N+ T +Q + + L G++ GD VA+ + N Y + + A IG
Sbjct: 20 AVIDELTNKAWTFEQLNKRAYSTVSWLYTRGVKKGDRVALLSPNHISYFDLLFACGKIGA 79
Query: 83 IVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSLGSSS 139
I PLN+R S E + + P ++ ++ +L + I + V + S
Sbjct: 80 IFVPLNWRLSMHEINEILADCTPKVIGIHPEFEAISQQLNTVSTFLIGDANYEVQVSYSI 139
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ 199
S+ +++ D L + +T GTTG PKGVV+SH +++
Sbjct: 140 SEEISETDPLA-------------------------MIYTGGTTGKPKGVVLSHQSILWN 174
Query: 200 SLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQH 258
++ I G EDDV ++ P+ H GGL++ ++ +LM+G V F + A+E + +
Sbjct: 175 AINTILSWGLAEDDVTVNYMPMFHTGGLNALSIPLLMMGGTVVIGEPFLGEKAVETLHRF 234
Query: 259 CVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI- 317
T+++ VP + L +K+ +K L+G P ++ + +F K L
Sbjct: 235 NCTTILLVPTMYHSLVQTDEFQKS--DFPCMKIFLSGAAPCPMQIYE----AFQKKGLAF 288
Query: 318 -SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK- 375
YG+TE P F ++P +G VGKP +K
Sbjct: 289 KEGYGLTEAG-------------------PNNF-YISPEDAQMNRG-SVGKPMLFNTIKL 327
Query: 376 VCSDGS----SHVGRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
V +DGS + VG +L +G H YW+ + K +V G W+ TGD+ D+ G +
Sbjct: 328 VKTDGSETEPNEVGELLIKGKHSFSFYWNHEQETKETVKDG--WIHTGDLAKRDEQGFYY 385
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+VGR+ I +GGENVYP E+E L HP I + V+G+ + + E+V A + + ++
Sbjct: 386 IVGRKKEMIITGGENVYPLEIEQWLAAHPAIDEVAVLGLPDEKWGEVVAAFITFKHTYS- 444
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ E L +C K L +K P+LF+ + P T GKI + +++
Sbjct: 445 ---------------IQDEELITYCESK-LGRYKIPKLFIRLEE-LPKTHVGKIDKKKLK 487
Query: 551 R 551
Sbjct: 488 E 488
>gi|456011983|gb|EMF45703.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 547
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/554 (24%), Positives = 241/554 (43%), Gaps = 76/554 (13%)
Query: 33 NTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA+ + IG+ G+ +AI + N +L A +GG++ +N +
Sbjct: 34 KTYKEFDEETDRLAKAFMGIGIEKGEHIAIWSDNKREWLLSQFATGKMGGVLVTVNTSYQ 93
Query: 93 FKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA 151
E + S +++ +E + Y+++ T P L ++ +N +
Sbjct: 94 SSELEYLLNQSDATTLILGEEFKGTSYIDILKTVCPEL------ATAEKGQINSTKLPHF 147
Query: 152 DILKGYSLRSLPFTHSWA----------------------PEGAVIICFTSGTTGSPKGV 189
+ S + P ++W P+ + I +TSGTTG PKGV
Sbjct: 148 KRVIVMSNNNYPGIYTWQEFEAFAEKVSDAEFEERFDSMNPDDVINIQYTSGTTGFPKGV 207
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFES 248
+++H ++ + E D P H G + MA + V +FE
Sbjct: 208 MLTHLNVVNNGKIVGDTMALTEKDRLCIPVPFFHCFGCVLGTMAAVTHSTTMVIAEQFEP 267
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
K L+ V+ T L VP + +A L + + +++ + G P E+MK+
Sbjct: 268 KRILQMVQDEKCTGLHGVPTMF--IAELNHPEFSSFDTSTLRTGIMAGSSCPIEVMKKVI 325
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
N +++ AYG TE+S +T T D +E + VGKP
Sbjct: 326 NDMGASEITIAYGQTESSPVIT-QTRADDDIEK-------------------RVSTVGKP 365
Query: 369 APHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
VE+K+ + G + TRG HVM Y+ A E WL TGDI
Sbjct: 366 HAGVEVKIIDPATGETVEIGMPGELCTRGYHVMSGYYKNEDATKVAIDSEGWLHTGDIAV 425
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
D+ G + + GR + GGEN+YP E+E L QHP ++ + V+G+ + + E ++A +
Sbjct: 426 EDEEGYIDITGRIKDMVIRGGENIYPREIEEFLYQHPSVLDVQVIGVPDPKYGEELMAWI 485
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
L+E Q LS+E LR +C+ K ++ K PR ++ + K +P+T++G
Sbjct: 486 ILKEDEQ----------------LSAEELRTYCKGK-ISRHKIPR-YIEFTKEYPMTASG 527
Query: 543 KIRRDEVRREVMSH 556
KI++ ++R + H
Sbjct: 528 KIQKFKLRELSIEH 541
>gi|385207668|ref|ZP_10034536.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385180006|gb|EIF29282.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 576
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 155/561 (27%), Positives = 255/561 (45%), Gaps = 88/561 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T Q+F ++V LA GLL +G+ GD V I + N +EW+L A A IG ++ +N
Sbjct: 61 TWQEFAEEVDVLAAGLLALGIVKGDRVGIWSPNR---VEWLLTQFATARIGAVLVNINPA 117
Query: 91 WSFKEASRAITSIR-PVMLVTDESSDSWYLE----------------LQHTAIPSLRWHV 133
+ E A+ + ++ + S YLE L + +P LR+ +
Sbjct: 118 YRLAELEYALNKVGCKAIIAAERFKTSMYLEMLQELAPELAAQAPGELHASRLPELRYVI 177
Query: 134 SLGSSSSDFVNKRDMLT-ADIL-KGYSLRSLPFTHSWAPEGAVIIC-------FTSGTTG 184
+ + + ML+ +D++ +G + +P + GA + C FTSGTTG
Sbjct: 178 RMCDTETP-----GMLSFSDVIEQGRASLDVPKLDAI---GATLSCRDPINIQFTSGTTG 229
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 243
+PKG ++H ++ + + E D PL H G+ S +A + VGA VF
Sbjct: 230 NPKGATLTHRNVVNNARYIAMAMRLTEQDGLCIPVPLYHCFGMVLSVLACVSVGANMVFP 289
Query: 244 PK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+ F+ + L AV + T+L VP + +A L ++ + G P E
Sbjct: 290 GEGFDPAATLAAVAEEQCTALHGVPTMF--IAELDHPDFATYDLSRLRTGIMAGSPCPIE 347
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
MK+ + ++ AYGMTETS P +F + T + + + +
Sbjct: 348 TMKKVVSRMHLGEITIAYGMTETS-------------------PVSFQSSTTDPLDK-RT 387
Query: 363 VCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
VG+ PH+E+K+ + V G + TRG VM YWD AK S + W+ T
Sbjct: 388 TTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMQGYWDD-EAKTRESIVDGWMHT 446
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ + D G +VGR + GGEN+YP E+E L +HP I + V G+ +++ E
Sbjct: 447 GDLATFDAEGYCNIVGRLKDMLIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDSKYGEE 506
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A V LR Q S+E ++Q C + + +K P+ ++ + P
Sbjct: 507 VCAWVVLRSGEQ----------------ASAEEIQQFC-QGQIAHYKVPK-YIRFVDELP 548
Query: 538 LTSTGKIRRDEVRREVMSHLK 558
+T TGK+++ +R ++S LK
Sbjct: 549 MTVTGKVQKFIMRERMISELK 569
>gi|120599150|ref|YP_963724.1| AMP-binding protein [Shewanella sp. W3-18-1]
gi|120559243|gb|ABM25170.1| AMP-dependent synthetase and ligase [Shewanella sp. W3-18-1]
Length = 570
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 243/548 (44%), Gaps = 68/548 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFK 94
+Q++ + LA GLL +G++ GD V I S N EW L A A IG I+ +N + +
Sbjct: 59 RQYLAKIDALATGLLTLGIKPGDRVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYRPE 117
Query: 95 EASRAITSI--RPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E A++++ R V + D+ S YLE LQ A+P L + + +G
Sbjct: 118 ELQYALSNVGCRAV-ICADKFKSSNYLEMLYELAPELTSCPAGKLQAKAVPELEFVIRMG 176
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
S + D L DI + +P A+ I FTSGTTGSPKG +SH +
Sbjct: 177 KEKSTGMLNFDDLLIDITDDDKVMLESIAKELSPYDAINIQFTSGTTGSPKGATLSHHNI 236
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEA 254
+ + + D PL H G+ ++ L GA VF + F+ + L+
Sbjct: 237 LNNGYLVAEAMKFTCHDKLCIPVPLYHCFGMVLGSLVCLAKGAAAVFPGESFDPLTTLQV 296
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+EQ T+L VP + +A L + T S++ + G P E+M+ N
Sbjct: 297 IEQERCTALHGVPTMF--IAELEHPEFTRFDLSSLRTGVMAGATCPEEVMRRVQNLMYMK 354
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+++ YG TE S L +T D +E + + VG+ PH E+
Sbjct: 355 EVLIGYGQTE-CSPLNHITEIDSPIEK-------------------RVLTVGRALPHTEV 394
Query: 375 KVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
K+ + + G + +RG +M YW+ + WL +GDIG +D+ G V
Sbjct: 395 KIIDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDSASWLHSGDIGQMDEQGYV 454
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E L H + V G+ + + E V A +++R
Sbjct: 455 QIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGSI 514
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+E++ +R EK FK PR ++ + + +P+T TGKI++ ++
Sbjct: 515 ITEAD----------------IRHFLTEK-FAYFKVPR-YIKFVEQYPMTVTGKIQKFKM 556
Query: 550 RREVMSHL 557
R + L
Sbjct: 557 RELMYQEL 564
>gi|379760289|ref|YP_005346686.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-64]
gi|378808231|gb|AFC52365.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-64]
Length = 467
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 236/536 (44%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T + V+ + A E+G+ GD VAI A NS EWI+A AF
Sbjct: 11 DAEAVVDGPLRLTFTEVVERIRCAAGAFAELGIDKGDRVAIWAPNSA---EWIIA-AFGL 66
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ +EA I + ++ V++ +L+ +TA P+ + L
Sbjct: 67 LTAGGVLVPVNTRFKTEEAGDIIVRSKVKAVLV------QKGFLDQDYTA-PAGTPVIDL 119
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + I FTSGTTG PKG +++H
Sbjct: 120 ---KSDFLSS---------------GSPFERPVSGTDISDIIFTSGTTGRPKGAMLNHGQ 161
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEA 254
+ ++ E D YL P H GL + + + GA + + F+ + +E
Sbjct: 162 TLRMYEEWASLADLREGDRYLQINPYFHTFGLKAGLVTSFLRGATMLPVAVFDIDTVVEL 221
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ +T L P + L ++ K +++ + G +P EL++ P
Sbjct: 222 IERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAVTGAADIPVELVRRIHGELPFE 277
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG +F +V + G P VE+
Sbjct: 278 TLMTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GLPCDGVEV 316
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG ++ RG VM Y D A E WL TGD+GS DD G + +VGR
Sbjct: 317 RIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGWLHTGDLGSFDDAGRLRIVGR 371
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL HP + V+GI + R+ ++ A V +
Sbjct: 372 KKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERMGQVGKAFVVRKGE------- 424
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+S++ L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 425 -----------VSADELIGWCRDR-MAGFKVPRA-VQFLDSLPLNATGKVMKDQLR 467
>gi|172059174|ref|YP_001806826.1| AMP-binding domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171991691|gb|ACB62610.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 575
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 156/562 (27%), Positives = 247/562 (43%), Gaps = 90/562 (16%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++FV +V LA GL +G+ GD V I + N SEW L A A +G ++ +N +
Sbjct: 60 TWREFVHEVDVLAAGLAALGIVKGDCVGIWSPNRSEWLLTQ-FATARLGAVLVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ + ++ + S Y+E L+ +PSLR VS+
Sbjct: 119 LAELEYALNKVGCKAVIAAERFKTSAYVEMLQAIAPELASATPGDLRAARVPSLRTVVSM 178
Query: 136 GSSS-------SDFVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
G + +D + + RD L L + A + I FTSGTTGSPK
Sbjct: 179 GEVAPAGMFRFADVMARGRDTLDVAWLDAIG-------ATLAATDPINIQFTSGTTGSPK 231
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK- 245
G ++H ++ + + + E D PL H G+ A +A + GA VF +
Sbjct: 232 GATLTHCNVVNNARFIAMAMRFSEQDALCIPVPLYHCFGMVLAVLACVSKGAAMVFPGEA 291
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ + L AV T+L VP + +A L + +++ + G P E MK
Sbjct: 292 FDPVATLAAVADERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMK 349
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ +++ AYGMTETS P +F + T + + + + V
Sbjct: 350 RVVSQMHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTV 389
Query: 366 GKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLD 416
G+ PH+E+K+ V G + T+G VML YWD T EV W+
Sbjct: 390 GRIQPHLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDD-----DAKTHEVLVDGWMH 444
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ ++D G +VGR + GGENVYP E+E L +HP I V G+ +A+ E
Sbjct: 445 TGDLATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGE 504
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
+ A + LR Q SE + +R C + + +K PR ++ +
Sbjct: 505 ELCAWIVLRADEQMSEDD----------------VRAFCNGQ-IAHYKIPR-YIRFVDEL 546
Query: 537 PLTSTGKIRRDEVRREVMSHLK 558
P+T TGK+++ +R ++ LK
Sbjct: 547 PMTVTGKVQKFVMRERMIEELK 568
>gi|407685098|ref|YP_006800272.1| AMP-binding protein [Alteromonas macleodii str. 'English Channel
673']
gi|407246709|gb|AFT75895.1| AMP-binding domain protein [Alteromonas macleodii str. 'English
Channel 673']
Length = 579
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 241/554 (43%), Gaps = 70/554 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T QQ+ +V +A GLL G+ GD V I S N EW + +A A IG I+ LN +
Sbjct: 59 TYQQYWYEVERVACGLLANGVEPGDRVGIWSPNNIEWSIVQ-MATARIGAIMVCLNPAYR 117
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE--------------------LQHTAIPSLRW 131
E + AI ++ LV +S S Y+ L + +PSL++
Sbjct: 118 PDELAFAINNVSVKYLVMAQSFKQSNYVAMLKELAPEIDSQDKNTSRRPLTLSKLPSLKY 177
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++G + + L + + + + + + + I FTSGTTG+PKG +
Sbjct: 178 VYTIGDKPVEGLQAFSALQIEPTEALKSQLEAVESNLSADDNINIQFTSGTTGNPKGATL 237
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESK 249
+H ++ L + + D PL H G+ + L GAC VF + F+ +
Sbjct: 238 THRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPGESFDPE 297
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L VE+ T L VP + L K +++ + G P ELM++ +
Sbjct: 298 TTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTLRTGVMAGSTCPEELMRKVHS 355
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
F +++ YG TE S + +T D E Q VG+
Sbjct: 356 EFHMTEVVIGYGQTE-CSPINHITDIDSPFEK-------------------QVKTVGRAM 395
Query: 370 PHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
PH E+K+ + V G I RG VM YW + + E WL +GD+G +D
Sbjct: 396 PHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVKTKATIDDEGWLHSGDLGEMD 455
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E VL QH + V GI + + E V ++
Sbjct: 456 EEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNKYGEQVCLWIKA 515
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+E+ E DQ +R + + K L FK P+ ++ K +P+T TGK+
Sbjct: 516 KENRHIDE---DQ-------------IRDYLKSK-LAYFKVPK-YISVVKEYPMTVTGKL 557
Query: 545 RRDEVRREVMSHLK 558
++ ++R ++ LK
Sbjct: 558 QKFKMREYMIETLK 571
>gi|333924075|ref|YP_004497655.1| long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749636|gb|AEF94743.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 554
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 147/575 (25%), Positives = 244/575 (42%), Gaps = 74/575 (12%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L RIA +++V N T QF Q +A+GL+ +GL+ G+ +AI A N +
Sbjct: 13 LDRIATKFPDHDALVYTDRNLRYTYHQFNQLCRQVAKGLMALGLKRGEHIAIWATNVPEW 72
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV-----------------TDES 113
+ A +G ++ +N + E + LV E
Sbjct: 73 VTLQFATGKMGAVLVTVNTNYKTFEVEYLLKQSDTTTLVMIGGTKTSNYINIINELCPEL 132
Query: 114 SDSWYLELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPE 171
DS +L +P L+ + +G + + N RD+L A+ + L + S P+
Sbjct: 133 RDSQPGQLNSARLPMLKNVIFIGEDTPAGMWNWRDILAMANQVTDEELDAR--QASLDPD 190
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSA 230
+ + +TSGTTG PKGV+++H +I + + + + E D P H G +
Sbjct: 191 DCINMQYTSGTTGFPKGVMLTHFNIINNAHSIADCMNFTEQDKLCIPVPFFHCFGCVLGT 250
Query: 231 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 290
M ++ GA V + F LE +EQ T++ VP + + L + K S++
Sbjct: 251 MTCVVSGATMVPVEVFHPVRVLETIEQERCTAVHGVPTMF--IMELEELNKKKYDTSSLR 308
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
+ G P E+MK N ++ YG TE S ++T DP
Sbjct: 309 TGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRTDDPI------------ 356
Query: 351 NVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQF 402
+ VG+ P+VE K+ C G G I RG +VM Y+
Sbjct: 357 --------DLRVTTVGRTIPNVEAKILDPETGAECPPGVQ--GEICARGYNVMKGYYKMP 406
Query: 403 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 462
A WL TGD+G +D G + GR I GGEN+YP E+E L HP +
Sbjct: 407 EATAQAIDANGWLHTGDLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPLVK 466
Query: 463 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
+ VVG+ +A+ E V+A ++ +E L+ E ++ +C+ K +
Sbjct: 467 DVQVVGVPSAKYGEEVLAFIQPKEGAN----------------LTKEEIQAYCQNK-IAK 509
Query: 523 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+K P +VL+ +P T++GK+++ +R + + L
Sbjct: 510 YKIPS-YVLFTDSYPTTASGKVQKYRLREKAIREL 543
>gi|221370035|ref|YP_002521131.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides KD131]
gi|221163087|gb|ACM04058.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides KD131]
Length = 506
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 237/546 (43%), Gaps = 63/546 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+S I R + +F D+ + GL G+R G VA+ NS+ Y+ A+A +G
Sbjct: 11 DSAALIFRGRTRSWAEFAADMARIQHGLAAQGVRRGSRVAVLDRNSDDYVLLGYALAGMG 70
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD 141
++AP+N E S + + +P++LVT +L+ AI L +L +
Sbjct: 71 AVLAPVNMWLRPAELSYILGNCQPLLLVTSAE----FLDAAREAIAPLADPPALVLRGEE 126
Query: 142 FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
+ A+I G + SW + ++ +TSGTTG PKG +ISH ++ +L
Sbjct: 127 APGT--IPWAEIAAGEGRAPVSRPESW--DDPHLVLYTSGTTGRPKGALISHRRTVLDAL 182
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVT 261
A + + G G+ + + PL H G M V +FE+ +A+ +E H
Sbjct: 183 AALPVFGIGQHERFFCYMPLFHTGAWDYLKLYFMRRGAAVIAERFEADAAVAEIEAHRCN 242
Query: 262 SLITVPAIMADLATLIRVKKTWKGRD-SVKKILNGGGGLPSELMKEATNSFPKA-----K 315
+ VP ++ + + W D S +++ PS L+ +F + +
Sbjct: 243 GMFGVPLVLRQMVE----SQAWGTSDMSSMRLIAYANYDPSALILRIVEAFRERGAEGLR 298
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ +AYG+TE + N ++ +P + +G+P P V++
Sbjct: 299 IANAYGLTEGGPYICI-------------------NRPETAMGKP--LSIGQPVPGVQVA 337
Query: 376 VCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
+ + V G I RG +M Y ++ A G WL TGD+G +D+ G V
Sbjct: 338 LLDEDLREVPPGALGEICVRGPALMSGYLNRPEATAEAFAGG-WLHTGDLGRVDEEGFVH 396
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
LV R+ I++GGENV+ +EVE L+ HP I VVG+ + +
Sbjct: 397 LVDRKKDMIRTGGENVFAKEVEQTLVTHPAIRDCAVVGLPDD----------------DY 440
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E L+ +R R++ L GFKAPR V++ P T GKI++ EVR
Sbjct: 441 GERVVAVVVAEPGTDLAEAEVRSFVRDR-LAGFKAPRQ-VIFVPELPKTPAGKIKKHEVR 498
Query: 551 REVMSH 556
+ + +
Sbjct: 499 KAIAAE 504
>gi|443686109|gb|ELT89489.1| hypothetical protein CAPTEDRAFT_222402 [Capitella teleta]
Length = 577
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 251/565 (44%), Gaps = 70/565 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R++ V + N T + + + GLL +G + GD + + A N ++++ A A
Sbjct: 50 RDAAVFVQDNERLTFEDLLVECDTFGAGLLSLGFKPGDRIGVWAPNCKFWVIAQYATARA 109
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDES--SDSWY-------LELQHTA------ 125
G I+ +N + +E A+ ++ ++ E+ + +Y EL+ +A
Sbjct: 110 GLILVNVNPAYQARELEYALKKVQCKGIIAAETFKTQDYYGMLSSICPELETSAPNDLKS 169
Query: 126 --IPSLRWHVSLGSSSSDF---VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
+P L+ + + S F ++ D++T+ ++ R L + V I FTS
Sbjct: 170 ERLPDLKSVIMI--SEKKFPGALSVHDVMTSGESTAFNRRLLEIQDKIQFDDPVNIQFTS 227
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCHIGGLSSAMAMLMVGAC 239
GTTG+PKGV++SH ++ S + Y + + PL H G+ + A
Sbjct: 228 GTTGNPKGVLLSHHNIVNNSYFSALRLNYHQKPHRICIPVPLYHCFGMVIGSLQNVTSAS 287
Query: 240 HVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
P F ++ L+A+EQ TSL P + D+ L DS+ + G
Sbjct: 288 TTVYPSGSFNPEACLKAIEQEKCTSLYGTPTMFIDILHLPNFDDY--KIDSLNTGVMAGS 345
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+MK+ ++ AYG TE +S +TF T D T+E
Sbjct: 346 PCPIEVMKQVRTKLHMPEVTIAYGTTE-NSPVTFQTYQDDTIER---------------- 388
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGE 412
Q +G+P HVE+KV V G + RG VM Y+ A V +
Sbjct: 389 ---QVSTIGRPLHHVEVKVVDREGRIVPVNTPGELCIRGHVVMHSYYQDEAATAEVIGPD 445
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W TGD+ ++D+ +VGR I GGEN+YP +VE +L ++ I + VVG+ +
Sbjct: 446 RWYKTGDLATLDEHSYAKIVGRIKDMIIRGGENIYPLDVEQILYENSKIEDVQVVGVPDP 505
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
RL E V A ++L+E Q++ E +++ C+ K ++ FK P ++ +
Sbjct: 506 RLQEQVCAWIKLKEG---------QTATADE-------IKEFCKGK-ISHFKIPH-YIQF 547
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHL 557
+ FPLT TGK+++ ++R L
Sbjct: 548 VEEFPLTVTGKVQKYKIREMATEQL 572
>gi|237814343|ref|YP_002898794.1| AMP-binding domain protein [Burkholderia pseudomallei MSHR346]
gi|237505976|gb|ACQ98294.1| acyl-CoA synthetase family member 2 [Burkholderia pseudomallei
MSHR346]
Length = 576
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+E+G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIELGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 179 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 239 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGARMVFPGAAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 516 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDEL 568
>gi|288961013|ref|YP_003451352.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
gi|288913321|dbj|BAI74808.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
Length = 512
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 143/537 (26%), Positives = 233/537 (43%), Gaps = 54/537 (10%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAP 86
+ G+R + +QF + V LA GL +GLR D VAI ++N Y E A + G I A
Sbjct: 22 VEGDRRLSYRQFGERVCRLADGLYRLGLRRQDRVAILSMNRIEYFEIYGAAEWAGYIAAM 81
Query: 87 LNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+N+R + E + + P +LV E+ + +E +P L ++ +G +
Sbjct: 82 MNFRLAVPEMAEVLKDAAPRILVF-EAQYAEIVERLRPQLPELAVYICIGEGPDWALEYE 140
Query: 147 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
+L + + G +RS PE + +TSG+TG KGV +H + +
Sbjct: 141 GVLDSGSVGGPPIRS-------QPEDFCYLFYTSGSTGRAKGVPSTHISQRNAAQCSAFA 193
Query: 207 VGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITV 266
G L P HIGG +A L G + F+ LEA+ + VT V
Sbjct: 194 TGITGSSRVLQVTPAYHIGGRGYPLAALWSGGTVILQQHFDPVRMLEAIHKERVTHTFMV 253
Query: 267 PAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
A+M + + + + S++ I++ +P L+K F + + YGMTE +
Sbjct: 254 AAMMQAILDVPDIDRY--DVSSMRNIISASAPIPVPLLKRGIERFGRVITVQ-YGMTEAN 310
Query: 327 SSLTFMTLY--DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-- 382
+ + + DP N TP+ + + VG P + ++ D +
Sbjct: 311 GPVAVLHQHEVDP-------------NGTPDQIRRL--ASVGHVVPEIICRIVDDKGADC 355
Query: 383 ---HVGRILTRGAHVMLRYWDQFLAK-PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGR 438
G IL + + YW+ + +V G WL TGD+G D+ G ++LV R+
Sbjct: 356 LIGQTGEILIQSPFHIRHYWNNSASSLDTVRDG--WLHTGDMGYRDEEGYLFLVDRKKDM 413
Query: 439 IKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQS 498
I SGGEN+Y EVE +LQHP + V+G+ + + E V A V L+ SE+
Sbjct: 414 IISGGENIYSREVELAVLQHPVVADAAVIGVPDPKWVETVKAIVVLKPGMSVSETE---- 469
Query: 499 SKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
+ HCR + G+K PR V + P S+GK+ + +R+ S
Sbjct: 470 ------------IVHHCRSL-IAGYKCPR-SVDFVNELPRLSSGKVDKMRLRQRFRS 512
>gi|332882818|ref|ZP_08450429.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679320|gb|EGJ52306.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 545
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 144/546 (26%), Positives = 245/546 (44%), Gaps = 67/546 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
++++++ + T +F + V +A+GL+ +G++SGD V I + N EW L A A
Sbjct: 39 DALISVHQHYRATYTEFYEQVTAVAKGLIALGVKSGDRVGIWSPNC---YEWTLLQYATA 95
Query: 79 FIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVS 134
IG I+ +N + E I S + + S Y ++ A +LR V
Sbjct: 96 KIGAIMVNINPAYRTSELIYVINQSGLSYIFSAIQFKTSHYKKMIEDAREFTDTLRKEVY 155
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
G S F+ + ++ L+ Y + + F + V I +TSGTTG+PKGV ++H
Sbjct: 156 WGESWEYFLAQGKKVSDQKLQSYEAK-VQF------DDPVNIQYTSGTTGNPKGVTLTHH 208
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSAL 252
++ + + Y + D P H G+ + IP F++ L
Sbjct: 209 NILNNAYFIGVRMNYTDKDRVCIPVPFYHCFGMVIGNLCCTAHGATMVIPNDSFDATKTL 268
Query: 253 EAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
EAVE+ TSL VP + +++L TL R S++ + G P E+MK
Sbjct: 269 EAVERERCTSLYGVPTMFISELYTLDRHPYDLS---SLRTGVMAGALCPPEIMKRVKEQM 325
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS P G +H VG H
Sbjct: 326 NMHEITICYGMTETS---------------PVSTQTRIGVPFEKQIHS-----VGTIQDH 365
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 366 IEIKIINPETKAIVPRGESGELCTRGYSVMLKYWNSPQATAQVIDEQRWMHSGDLAMMDE 425
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++
Sbjct: 426 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKFGEEVMAWIK-- 483
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
N+ + L+ E LR C+++ + +K PR + + FP+T +GKIR
Sbjct: 484 --------------PNEGVTLTEEELRNFCKDR-IAHYKVPRYWKFVNE-FPMTISGKIR 527
Query: 546 RDEVRR 551
+ E+R
Sbjct: 528 KVEMRE 533
>gi|24418933|ref|NP_722502.1| acyl-CoA synthetase family member 2, mitochondrial precursor [Mus
musculus]
gi|81901906|sp|Q8VCW8.1|ACSF2_MOUSE RecName: Full=Acyl-CoA synthetase family member 2, mitochondrial;
Flags: Precursor
gi|17390865|gb|AAH18371.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|26329787|dbj|BAC28632.1| unnamed protein product [Mus musculus]
gi|38649240|gb|AAH63269.1| Acyl-CoA synthetase family member 2 [Mus musculus]
gi|148683985|gb|EDL15932.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
gi|148683986|gb|EDL15933.1| cDNA sequence BC018371, isoform CRA_b [Mus musculus]
Length = 615
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 154/584 (26%), Positives = 263/584 (45%), Gaps = 77/584 (13%)
Query: 9 ICQCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ +CL A R ++V + N Q ++V A GLL IGLR GD + + N
Sbjct: 74 VGECLDATAQRFPDREALVILHENIRLNFAQLKEEVDKAASGLLSIGLRKGDRLGMWGPN 133
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWY------ 118
S ++ LA A G I+ +N + E + + + ++ + +Y
Sbjct: 134 SYAWVLIQLATAQAGIILVSVNPAYQSSELEYVLRKVGCKGIVFPKQFKTQQYYDILKQV 193
Query: 119 ---LE------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW- 168
LE L+ +P L +S+ + + D++ A K +L L + +
Sbjct: 194 CPELEKAQPGALKSERLPDLTTVISVDAPLPGTLLLDDIVAAGG-KEQNLAQLRYNQRFL 252
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYL-HTAPLCH- 223
+ + I FTSGTTG+PKG +SH ++ S+ ++ + +++ L +PL H
Sbjct: 253 SCYDPINIQFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHC 312
Query: 224 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
+G + M +M GA + P F K ALEA+ + T L P + D+ +
Sbjct: 313 LGSVGGTMVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPD 368
Query: 283 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
+ D S++ + G P EL++ N +L+ YG TE +S +TFM + TLE
Sbjct: 369 FSSYDFTSIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE 427
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 394
Q G+V G+ PH E ++ + + + G + RG V
Sbjct: 428 ------QKAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCV 468
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
M YW + + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 469 MQGYWGEPQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDF 528
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L+HP + VVG+ + R+ E + AC+RL+ ++E ++
Sbjct: 529 FLKHPQVQEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKAF 572
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
C+ K ++ FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 573 CKGK-ISHFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|389681151|ref|ZP_10172496.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
gi|388554687|gb|EIM17935.1| putative long-chain-fatty-acid--CoA ligase [Pseudomonas
chlororaphis O6]
Length = 564
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 251/581 (43%), Gaps = 76/581 (13%)
Query: 9 ICQCLSR-IAAVKRNSVVTITGNRHN----TGQQFVQDVLNLARGLLEIGLRSGDIVAIS 63
I Q R +A+ R + + RH + QQ + V AR LL +GLR+GD + I
Sbjct: 26 IGQAFDRTVASYPRGEALVV---RHQQLRYSWQQLAETVDLHARALLALGLRTGDRLGIW 82
Query: 64 ALNSEWYLEWILAVAFIGGIVAPLN--YRWSFKE-------------ASRAITSIRPVML 108
A N + A A IG I+ +N YR S E A TS ML
Sbjct: 83 APNCAQWCISQFASAKIGAILVNINPAYRSSELEYVLKQSGCQWLVCAGAFKTSDYHAML 142
Query: 109 --VTDESSDSWYLELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSL-PF 164
+ E + +LQ +P LR +SL + S F+ + AD+ G S+ +L
Sbjct: 143 QGLAPELAQQSIGQLQSERLPDLRGVISLDAQPPSGFLPWSQL--ADLGAGVSVEALRER 200
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
S P+ AV I +TSGTTG PKG +SH ++ +G G +D + PL H
Sbjct: 201 QDSLDPDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGHEDRLVIPVPLYHC 260
Query: 225 GGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
G+ + + P F+ L AV + T L VP + +A L + ++
Sbjct: 261 FGMVMGNLGCVTHGTTMIYPNDAFDPLLTLSAVAEEKATGLYGVPTMF--IAMLDQPRRA 318
Query: 283 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 342
S++ + G P E+M+ + +++ AYGMTETS +L+T
Sbjct: 319 EFDLSSLRTGIMAGATCPIEVMRRVISEMHMSEVQIAYGMTETSPV---------SLQT- 368
Query: 343 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLR 397
P + + VG+ P +E K+ + + +G + TRG VML
Sbjct: 369 ----------GPADDLELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLG 418
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
YW+ W+ TGD+ ++++ G V + GR I GGEN+YP E+E
Sbjct: 419 YWNNPQGTAEAIDQAGWMHTGDLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFT 478
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
HP + + V+GI ++ E +VA ++ SE E L+ C+E
Sbjct: 479 HPAVADVQVIGIPCSKYGEEIVAWIKFHPGHTASE----------------EELQAWCKE 522
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
+ + FK PR F + FP+T TGKI++ +R + L+
Sbjct: 523 R-IAHFKTPRYFKFVEE-FPMTVTGKIQKFRMREISIEELR 561
>gi|398894673|ref|ZP_10646793.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
gi|398181952|gb|EJM69489.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
Length = 538
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 230/522 (44%), Gaps = 52/522 (9%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI---GGIVAPLNYRWSFKEA 96
+ V+ ARGL+ +G+++GD V I A NS +WILA I G ++ P+N R EA
Sbjct: 49 ERVMGFARGLMALGIQAGDRVGIWAPNSG---DWILAALGIQCAGAVLVPINTRMKGLEA 105
Query: 97 SRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK 155
+ + S ++ V D Y L P+ H+ + + ++ D+ A L+
Sbjct: 106 ADVLERSGCRLLFVPQRFLDVDYPALLAPHRPASLEHLVMLDGDTPGLSS-DLTLAQFLR 164
Query: 156 GYSLRSLPFTHSWA----PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE 211
G + A PE + FTSGTTG PKGV+ H + + ++G
Sbjct: 165 GAATIDADSARHRALAVGPEAMCDLLFTSGTTGKPKGVMSGHGQNLRAFSEYVKVIGLVP 224
Query: 212 DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAI 269
DD YL P H G + ++G + +P F+++ + + + ++ L P +
Sbjct: 225 DDRYLIVNPFFHAFGYKAGWLTCLIGGATI-LPHAVFDAEQVFQRIARERISVLPGAPTL 283
Query: 270 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSL 329
L ++K+T S++ + G +P L++ N A + +AYG+TE
Sbjct: 284 YLSLLAHPQLKQT--DLSSLRIAVTGSASIPPSLIERMRNELGFAVVTTAYGLTECGG-- 339
Query: 330 TFMTLYDPTLETPGQLPQAFGNVTPNSVHQP-QGVCVGKPAPHVELKVCSDGSSHVGRIL 388
T+ DP Q V + +P G V PH + + + G I
Sbjct: 340 -LATICDP---------QDSAQVIAGTSGRPIAGTEVSIRDPHNQ----ALDAGLTGEIC 385
Query: 389 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG H+M Y+ A E WL TGD+G +D+ GN+ + R GG N YP
Sbjct: 386 LRGFHIMQGYFQNPEATREAIDAEGWLHTGDVGRLDEAGNLIITDRLKDMFIVGGFNCYP 445
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E+EA L++HP I + V+GIA+ R+ E+ ACV LRE + E+ S+ +
Sbjct: 446 AEIEAALIRHPAIAQVAVIGIADERMGEVGCACVVLREGKELDEAQLIAWSREQ------ 499
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ +K PR V + PL + K+ ++E+R
Sbjct: 500 -----------MANYKVPRQ-VHFFNALPLNPSSKVAKNELR 529
>gi|73541161|ref|YP_295681.1| AMP-binding protein [Ralstonia eutropha JMP134]
gi|72118574|gb|AAZ60837.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 578
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 248/557 (44%), Gaps = 83/557 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T Q+F V LA +GLR GD V I + N +EW+L A A +G ++ +N
Sbjct: 64 TWQEFAAAVDALAASFHALGLRRGDRVGIWSPNR---VEWLLTQFATARVGLVMVNINPA 120
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHV 133
+ E A+ + ++ ES S YLE LQ +P LRW +
Sbjct: 121 YRLSELEYALNKVGCKAVIAPESFKTSRYLEMLQTLAPELQQSEPGALQAARLPELRWVI 180
Query: 134 SLGSSSSDFVNKRDMLTADILK----GYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKG 188
+ + + MLT L G + L T + + FTSGTTG+PKG
Sbjct: 181 RMENKPTP-----GMLTWQELHARGAGLPVSELDAITAQLDRHDPINVQFTSGTTGAPKG 235
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-F 246
++H ++ + A + + E D PL H G+ A +A + GAC VF + F
Sbjct: 236 ATLTHRNILNNARHIAAAMRFTEQDKLCIPVPLYHCFGMVLAVLACVSTGACMVFPGEAF 295
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E + + AV + T+L VP + +A L + + +++ + G P E+MK
Sbjct: 296 EPVATMSAVSEERCTALHGVPTMF--IAQLDHPEFSRFDFSTLRTGIMAGSPCPIEVMKR 353
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
A++ AYGMTETS P +F + T + + + + VG
Sbjct: 354 VVADMHMAEVTIAYGMTETS-------------------PVSFQSSTNDPLDK-RVSTVG 393
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E KV D + + G + TRG VML YWD A+ S + + W+ TGD+
Sbjct: 394 RVQPHLECKVV-DATGQIVPVGETGELCTRGYSVMLGYWDD-EARTSEAIRDGWMHTGDL 451
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
+ID G +VGR + GGENVYP E+E L +HP + + V G+ + + E + A
Sbjct: 452 ATIDAEGYCNIVGRVKDMLIRGGENVYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEICA 511
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V L+ +E +R CR++ + +K PR ++ + P+T
Sbjct: 512 WVVLKPGQTATEDE----------------IRAFCRDQ-IAHYKIPR-YIRFVDEMPMTI 553
Query: 541 TGKIRRDEVRREVMSHL 557
TGK+++ +R + L
Sbjct: 554 TGKVQKFVMRERMTKEL 570
>gi|413964113|ref|ZP_11403340.1| AMP-binding domain protein [Burkholderia sp. SJ98]
gi|413929945|gb|EKS69233.1| AMP-binding domain protein [Burkholderia sp. SJ98]
Length = 576
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 151/573 (26%), Positives = 252/573 (43%), Gaps = 86/573 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R +VV N T ++F + LA GLL +G+ +GD V I + N +EW+L A
Sbjct: 48 RPAVVFREQNIRWTWREFANQIDVLASGLLALGIEAGDRVGIWSPNR---IEWLLTQFAT 104
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHT------------ 124
A +G + +N + E A+ + ++ ++ S YLE+ T
Sbjct: 105 ARMGATLVNINPAYRLAELEYALNKVGCKAIIAAEQFKSSKYLEMLQTLAPELAHAEPNA 164
Query: 125 ----AIPSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWA---PEGAVII 176
+P LR + +G S + +N D++ + L + P A P+ + I
Sbjct: 165 LHAANLPELRAVIRMGESKTPGMLNFEDVMRTGRER---LDATPLDAVEAKLKPDDPINI 221
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV 236
FTSGTTG+PKG ++H ++ + + E D PL H G+ A+ +
Sbjct: 222 QFTSGTTGNPKGATLTHRNIVNNARYIAMAMRLTEQDSLCIPVPLYHCFGMVLAVLACVS 281
Query: 237 GACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
C + P F+ + L AV + T+L VP + + + G+ + ++
Sbjct: 282 TGCTMVFPGEAFDPAATLAAVHEEKCTALHGVPTMF-----IAELDHPDFGKYDLSRLRT 336
Query: 295 G---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
G G P E MK + +++ AYGMTETS P +F +
Sbjct: 337 GIMAGSPCPIETMKRVVSKMHLSEITIAYGMTETS-------------------PVSFQS 377
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAK 405
T + + + + VG+ PH+E+K+ + V G + TRG VM YW D +
Sbjct: 378 STTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSVMKGYWGDDAKTR 436
Query: 406 PSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
++ G W+ TGD+ +ID G +VGR + GGENVYP E+E L +HP + +
Sbjct: 437 EAIVDG--WMHTGDLATIDAEGYCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKVQSVQ 494
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
V G+ + + E V A + +R Q SE E +R+ C + + +K
Sbjct: 495 VFGVPDQKYGEEVCAWIVVRPGEQASE----------------EEIREFC-QGQIAHYKI 537
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
PR ++ + P+T TGK ++ +R ++ LK
Sbjct: 538 PR-YIRFVDELPMTVTGKAQKFVMRARMIDELK 569
>gi|410455556|ref|ZP_11309433.1| long-chain-fatty-acid--CoA ligase [Bacillus bataviensis LMG 21833]
gi|409929037|gb|EKN66127.1| long-chain-fatty-acid--CoA ligase [Bacillus bataviensis LMG 21833]
Length = 522
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 252/548 (45%), Gaps = 68/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
++++ + N T +++ V LA LL+ G++ GD V+ N+E A A I
Sbjct: 19 KDALYDVRKNVRYTYKEWNDQVNRLANALLKEGVKKGDRVSTFMFNTEELGTAFFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R + +E + + P +++ ++S + W+++ +
Sbjct: 79 GAIFNPINFRLTPEEVAYILADATPKVVLFEKSLEPVVSAIANRFDKISFWFIDEEKPEY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ + LGS+S++ V + D+ D+ +TSGTTG P
Sbjct: 139 AA-SYQEKLGSASTEEV-QIDVNENDVYA--------------------FIYTSGTTGRP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK 245
KGV+ +H ++ QSL +A +DV L TAP+ H L A + + +GA +V + +
Sbjct: 177 KGVMHTHRNMVDQSLLCVAAQKIEAEDVGLVTAPMFHCAELHCAFLPRVQIGAKNVILHQ 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F K+ L +E ++ P + L++ S+K+ L G + L+
Sbjct: 237 FNPKAILSLIENEKISRFFAAPTMWN---MLLQEDLNQYDLSSLKQGLYGAAPMAPSLVH 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+S LI AYGMTE ++TF++ YD L G QA N V +G
Sbjct: 294 ALHDSL-GISLIQAYGMTEMGPAITFLSEYD-QLRKAGSAGQAALNHDIRIVRTTEG--- 348
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
G P + + G I+ +G +M+ Y+++ A + + + W +GDIG +D+
Sbjct: 349 GPSDPDDLMP-----AGETGEIIVKGPCMMVGYFNREEATEN-ALYKGWYHSGDIGYLDE 402
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +++ R + I SGGEN+YP EVE L HPG++ + +VG + R E V A V ++
Sbjct: 403 DGFLFVNDRVDDMIISGGENIYPREVEDALHAHPGVLDVAIVGQPDDRWGETVSAFV-VK 461
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ +E D+ KN + +L +K PR ++ P ++GKI+
Sbjct: 462 KDPNVTEQELDEFCKNSD---------------SLANYKRPRKYIFC-DALPRNASGKIQ 505
Query: 546 RDEVRREV 553
+ +R+++
Sbjct: 506 KFVLRKQL 513
>gi|359768354|ref|ZP_09272129.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
gi|359314229|dbj|GAB24962.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
Length = 517
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 245/552 (44%), Gaps = 70/552 (12%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
++R AA+ + + + ++F + LA L G+ GD VA LN +L
Sbjct: 16 IARRAAIGPDRPAITFDDTTMSFREFSDRIDRLAAALRAGGVGVGDRVAYLGLNHPMFLV 75
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
+ A A G PLN+R + E + I L+ D + + E+ +L+
Sbjct: 76 TMFASARAGATFVPLNFRLTGAELAYIINDAGAHTLIADPALAAVVDEVADQL--TLQRC 133
Query: 133 VSLGS----SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+++G S++ V AD + S + +I +TSGTTG PKG
Sbjct: 134 IAVGEHVGWESAEAVIAHAEPIADPARPAS------------DAIAVIMYTSGTTGRPKG 181
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFE 247
+++H L ++ + + D+ APL HIGGL+ + + L G V P F+
Sbjct: 182 AMLTHGNLFWNNMNSLLCLDVETSDISYCAAPLFHIGGLNVTTLVTLQKGGHIVLAPTFD 241
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+AL+ +E++ VT++ VPA+ ++ + R + S++ ++ GG +P LM+
Sbjct: 242 PAAALDTIEKYRVTTMFGVPAMFLFMSQVPRFETA--DLSSLRYLICGGAPVPEPLMRRY 299
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP-------NSVHQP 360
YG+TET+ M L E+ ++ A V P ++ + P
Sbjct: 300 AER--GLAFAQGYGLTETAPLALVMGLD----ESAAKIGAAGNKVLPLSDVRLVDATNSP 353
Query: 361 QGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
V VG P G + RG VM+ YW A +V E W TGDI
Sbjct: 354 --VPVGTP----------------GEVCVRGPQVMVGYWRNQAATDAVIDDEGWFHTGDI 395
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G DD G +++V R + +GGENVYP EVE+VL HP + I ++G+ +A+ E V A
Sbjct: 396 GREDDDGYIYVVDRVKDMVITGGENVYPAEVESVLYSHPAVAEIAILGLPDAKWGEAVTA 455
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ ++ +E+ L E LR +++ L +K P L + + P
Sbjct: 456 VI--------------ATAPGQEVTL--EELRDFAKDQ-LARYKLP-LRLEFVDALPRNP 497
Query: 541 TGKIRRDEVRRE 552
+GK+ + ++R +
Sbjct: 498 SGKVLKYQLREQ 509
>gi|297530509|ref|YP_003671784.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|297253761|gb|ADI27207.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
Length = 524
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 249/541 (46%), Gaps = 54/541 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV R T ++ ++V A LE G+R GD V+ N+ + A A I
Sbjct: 19 REAVVDAATGRRYTYAEWEREVNRWANAFLEAGVRKGDRVSTVLYNTLELATALFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G + P+N+R +E + +T P +++ + + +E + AI S HVS S
Sbjct: 79 GAVFNPINFRLRAEEIAYILTDAEPKIVLFERA-----VEPELAAIHSRFPHVSFWSIDR 133
Query: 141 D---FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D F A +L P H + I+ +TSGTTG PKGV+ H +I
Sbjct: 134 DPPPFAK-----NAHEQAARALGEAPRVHVDESDLYAIM-YTSGTTGRPKGVMHRHRDMI 187
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
QS+ ++ E D L APL H L + + GA V + F++K LE +E
Sbjct: 188 EQSVICHGVMRIRETDRGLAAAPLFHCAELHCCLLPRVHAGAASVILHHFDAKLVLETIE 247
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKA 314
+ +T L P + + +++ G D S++ L G + L+++
Sbjct: 248 RERITILFGAPTMWNMI-----LQENVSGYDLSSLRLGLYGAAPMAPALVRQCQEQL-GI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+LI AYGMTE ++TF+ L D L+ G +A N H+ + V + P
Sbjct: 302 ELIQAYGMTEMGPAVTFL-LEDEQLKKAGSAGRACLN------HEIRVVRAREDGPSDPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y+ + A + ++ G W +GD+G +D+ G +++
Sbjct: 355 DVLP--PYEVGEIVMRGPCMMAGYYKREEATEKALYKG--WYHSGDLGYLDEDGYLYVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGGENVYP EVE VL +HP ++ + V+G + E VVA V
Sbjct: 411 RVDDMVISGGENVYPREVEDVLYEHPKVLDVAVLGEPDELWGEKVVAFV----------- 459
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K+ LL+++ L Q C+ + L +K PR + P ++GKI++ +R++
Sbjct: 460 ------VKKDDLLTADELEQFCKTSDRLAPYKRPRAYYFI-DALPRNASGKIQKFLLRKQ 512
Query: 553 V 553
+
Sbjct: 513 L 513
>gi|315126511|ref|YP_004068514.1| acyl-CoA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015025|gb|ADT68363.1| acyl-CoA synthetase [Pseudoalteromonas sp. SM9913]
Length = 577
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 141/560 (25%), Positives = 243/560 (43%), Gaps = 66/560 (11%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIG 81
+VV N + +QF Q + LA GLL +G++ G+ V I S N +W L A A IG
Sbjct: 53 AVVVAHQNIRLSYKQFQQQINQLAMGLLALGVKPGERVGIWSPNNIQWCLTQ-FATAKIG 111
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYL----------------ELQHT 124
I+ +N + E A+ S+ L+T E S Y+ EL
Sbjct: 112 AIMVCINPAYRPSELQYALNSVECSTLITATEFKGSHYINMLQSLAPELSGCNKGELTAV 171
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
+P+L+ + +G D + + + + + L + + I FTSGTTG
Sbjct: 172 KLPTLKNVICIGDEPVDGMFSFNEVMSMPTDAHKLELQAVAKTLDCNQDINIQFTSGTTG 231
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
+PKG ++H ++ +L + + E D PL H G+ + + P
Sbjct: 232 NPKGATLTHKNILNNALLVAQAMHFTERDKLCIPVPLYHCFGMVLGSLLCVSKGAAAIYP 291
Query: 245 K--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
F+ K+ LE V+Q T L VP + L + +++ + G P +
Sbjct: 292 SDSFDPKTTLEVVQQEKCTGLHGVPTMFISELELNNFNEY--DLSTLRTGVMAGSTCPEQ 349
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ +++ AYG TE S + +T D ++E Q
Sbjct: 350 VMRKVQTLMNMNQVVIAYGQTE-CSPINNITETDSSIER-------------------QV 389
Query: 363 VCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
VG+ H E+K+ + G + +RGA +M YW+ + + WL +
Sbjct: 390 TTVGRALAHTEVKIIDEVGDIQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNDGWLHS 449
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G +D G V +VGR I GGEN+YP E+E VL +PGI + GI++ + E
Sbjct: 450 GDLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGISDEKFGEE 509
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A ++ +E +L + +R ++K L FK P+ ++ + + +P
Sbjct: 510 VCAWIQPKEGE----------------VLDEQAIRLFLKDK-LAYFKQPK-YIRFVENYP 551
Query: 538 LTSTGKIRRDEVRREVMSHL 557
+T TGK+++ ++R ++ L
Sbjct: 552 MTVTGKLQKFKMREQMQEEL 571
>gi|134046075|ref|YP_001097561.1| AMP-binding domain-containing protein [Methanococcus maripaludis
C5]
gi|132663700|gb|ABO35346.1| AMP-dependent synthetase and ligase [Methanococcus maripaludis C5]
Length = 549
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 150/560 (26%), Positives = 246/560 (43%), Gaps = 82/560 (14%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
+R +V N T ++F V LA+GLLEIG+ GD V I A N +L ++ A A
Sbjct: 21 EREFMVYPDRNLRLTYKEFDDRVNMLAKGLLEIGITKGDHVGIWAKNVPDWLTFMFATAK 80
Query: 80 IGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSS 138
IG ++ +N + E + + S + + D D+ Y+++ + +P L+ G +
Sbjct: 81 IGAVLVTVNTAYKSHELAYVLKQSDMKALAIIDGFRDTSYIDILYELVPELKTCQRGGLN 140
Query: 139 SSDFVNKRDMLTADILKG---YSLRSLPFTHSWAPEGAVI-------------ICFTSGT 182
SS+F + ++ K Y+ L P+ ++ + +TSGT
Sbjct: 141 SSEFPFLKSVIYVGQEKHRGMYNTNELMLLGKHQPDDELLRIKKELDSDDVINMQYTSGT 200
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TG PKGV+++H ++ + ++D T PL H G+ A MA+L G V
Sbjct: 201 TGFPKGVMLTHKNILNNGFYIGDRQKFTKEDRLCITVPLFHCFGIVLAVMAILTHGGTMV 260
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAI--------MADLATLIRVKKTWKGRDSVKKIL 293
+ F+ L AV++ T+L VP + M D+ L S++ +
Sbjct: 261 MVELFDPLLVLAAVQKEKCTALYGVPTMFIAEYSHPMFDMFDL----------SSLRTGI 310
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+MK+ + S YG+TE S T T D +LE Q
Sbjct: 311 MAGSTPPIEVMKKVVKDMYMTGITSVYGLTEGSPGFT-QTSIDDSLEKRVQ--------- 360
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPS 407
VG+ P E+K+ G +G I +G +VM Y+
Sbjct: 361 ----------TVGRKLPECEVKLVDPETGETVGPGEIGEICCKGYNVMKGYYKMPEKTKE 410
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
V + WL +GD+ ++D+ G +VGR I GGEN+YP E+E L PGI V+
Sbjct: 411 VIDEDGWLHSGDLATVDEEGYYSIVGRIKEMIIRGGENIYPREIEEFLYTMPGINDAQVI 470
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
GI + + E+V A V +E + E + +R + +K + +K P+
Sbjct: 471 GIPDEKYGEIVGAFVIPKEDYDIREED----------------VRDYAIDK-IARYKVPK 513
Query: 528 -LFVLWRKPFPLTSTGKIRR 546
+FV+ K FP+T++GKI++
Sbjct: 514 HVFVV--KEFPMTASGKIQK 531
>gi|152988530|ref|YP_001348039.1| AMP-binding protein [Pseudomonas aeruginosa PA7]
gi|150963688|gb|ABR85713.1| acyl-CoA synthase [Pseudomonas aeruginosa PA7]
Length = 561
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 246/557 (44%), Gaps = 78/557 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
+Q + V AR + +GLR G+ + I A N +EW + A A +G ++ +N +
Sbjct: 49 RQLAERVDTYARAFIALGLRPGERLGIWAPNCAEWCITQ-FASAKVGAVLVNINPAYRSS 107
Query: 95 EASRAI---------------TSIRPVML--VTDESSDSWYLELQHTAIPSLRWHVSLGS 137
E A+ TS ML + E ++ EL +P LR VSL
Sbjct: 108 ELEYALKQSGCSWLVCADAFKTSDYHAMLGELLPELAEGRPGELASERLPELRGVVSLAE 167
Query: 138 SS-SDFVNKRDML-TADILKGYSLR----SLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ + F++ + + A+ + LR SL F + I +TSGTTG PKG +
Sbjct: 168 RAPAGFLHWQGLPGLAEAVGAEELRQRQASLQFDEP------INIQYTSGTTGFPKGATL 221
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESK 249
SH ++ +G G D + PL H G+ + + G+ ++ P F+++
Sbjct: 222 SHYNILNNGYLVGESLGLGAQDRLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAE 281
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AV + T+L VP + +A L ++ S++ + G P E+M+ +
Sbjct: 282 ATLLAVAEERATALYGVPTMF--IAELDHPRRGEFDLSSLRTGIMAGATCPIEVMRRVID 339
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
A++ AYGMTETS ++ T D LE VT VG+
Sbjct: 340 EMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT----------TVGRTQ 379
Query: 370 PHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
P +E K+ +G + TRG VML YW+ A W+ TGD+ +D
Sbjct: 380 PRLESKIVDQQGRVVPRGEIGELCTRGYSVMLGYWNDPQATAEAIDPARWMHTGDLALMD 439
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V +VGR I GGEN+YP E+E HP + + V+GI + R E +VA ++L
Sbjct: 440 DDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ + E LR C+E+ + FK PR F + FP+T TGKI
Sbjct: 500 HPGHRADD----------------EQLRAFCKER-IAHFKVPRHFKFVDE-FPMTVTGKI 541
Query: 545 RRDEVRREVMSHLKSLP 561
++ +R + ++ LP
Sbjct: 542 QKFRMREVSIQEVRLLP 558
>gi|150014678|gb|ABR57200.1| Acs [Pseudomonas putida]
Length = 557
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 159/560 (28%), Positives = 242/560 (43%), Gaps = 84/560 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLN--YR 90
T QQ + V AR L+ +G++ GD + I A N +EW + A A +G I+ +N YR
Sbjct: 47 TWQQLAEAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQ-FASAKVGAILVNINPAYR 105
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWYLELQH---------------TAIPSLRWHVSL 135
S + + + R V+ + ++ LQ P LR VSL
Sbjct: 106 SSELDYALGQSGCRWVICADAFKTSDYHAMLQALIPGLASGQPGALICERFPELRGVVSL 165
Query: 136 GSSSSD-------FVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S + D ++ + L + LR + + I +TSGTTG P
Sbjct: 166 AVSPPPGFLAWPALQARADAVSREALAERQAQLRC---------DDPINIQYTSGTTGFP 216
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK- 245
KG +SHS ++ +G E D + PL H G+ A M + P
Sbjct: 217 KGATLSHSNILNNGYTVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSTLIYPND 276
Query: 246 -FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
F+ + L AV + T+L VP + +A L ++ S++ + G P E+M
Sbjct: 277 AFDPLATLRAVAEEKATALYGVPTMF--IAELDHPQRGEFDLSSLRTGIMAGATCPIEVM 334
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+ A++ AYGMTETS ++ T D LE VT
Sbjct: 335 RRVIGEMHMAEVQIAYGMTETSP-VSLQTGPDDDLER---------RVT----------S 374
Query: 365 VGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
VG+ P +E KV +DG++ +G + TRG VML YW+ A E W+ TGD
Sbjct: 375 VGRTQPRLENKVVDADGNTVPRGEIGELCTRGYSVMLGYWNNLKATADSIDAEGWMHTGD 434
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ +D+ G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +V
Sbjct: 435 LAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIV 494
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A VRL SE E LR+ R + + FK PR F + FP+T
Sbjct: 495 AWVRLHPGHTASE----------------EALREWARAR-IAHFKVPRYFRFVDE-FPMT 536
Query: 540 STGKIRRDEVRREVMSHLKS 559
TGK+++ +R ++ L S
Sbjct: 537 VTGKVQKFRMREISVAELSS 556
>gi|220918306|ref|YP_002493610.1| AMP-binding domain-containing protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219956160|gb|ACL66544.1| AMP-dependent synthetase and ligase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 546
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 246/553 (44%), Gaps = 67/553 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R+++V++ T +QF ++ +ARGLL G++ GD V I A N EW++ A
Sbjct: 34 RDALVSVYQGYRATYRQFWEETSLVARGLLVRGVKKGDRVGIWAPNR---YEWVVIQYAS 90
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E A+ S +L+ ++ Y+ + P LR +
Sbjct: 91 ARIGAILVNINPAYRVHELEYALKQSGVSTLLLARTFRNADYVAMVRDVRLRCPELRQTI 150
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ + + D L R L F + + I +TSGTTG PKG +SH
Sbjct: 151 VIDDEWGALKHDALRFSEDELARLE-RDLQF------DDPINIQYTSGTTGFPKGATLSH 203
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ + Y + D P H G+ A MA+ GA V + F+ +
Sbjct: 204 HNIVNNGFFIGEFLRYTDADRVCIPVPFYHCFGMVLANMAITTHGAAMVIPLDNFDPLTV 263
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
+ V+Q T+L VP + +A L + S++ + G P E+MK+
Sbjct: 264 MRTVQQERCTALYGVPTMF--IAELDHPEFQAFDFSSLRTGIMAGSPCPVEVMKKVQKDM 321
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T DP + + VG+ PH
Sbjct: 322 HMPEVTICYGMTETSPVSTQSRTDDPL--------------------EKRVTTVGQVHPH 361
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSID 424
VE+K+ + + G + TRG VML YW D + ++ G W+ TGD+ +ID
Sbjct: 362 VEIKIVDPTTGRIVPRGTPGELCTRGYSVMLGYWRDPHATREAIDDGR-WMHTGDLATID 420
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR + GGEN++P EVE L PG+ + V+G+ + + E ++A V+L
Sbjct: 421 EHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQVIGVPDVKYGEELMAWVKL 480
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R + L+ E +R +C+ K T +K PR + + FP+T +GK+
Sbjct: 481 RPG----------------VTLTGEEVRAYCKGKIAT-YKIPRYY-KFVDGFPMTVSGKV 522
Query: 545 RRDEVRREVMSHL 557
++ ++R + L
Sbjct: 523 QKYKMRETAIQEL 535
>gi|221635736|ref|YP_002523612.1| feruloyl-CoA synthetase [Thermomicrobium roseum DSM 5159]
gi|221157454|gb|ACM06572.1| feruloyl-CoA synthetase [Thermomicrobium roseum DSM 5159]
Length = 538
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/525 (27%), Positives = 240/525 (45%), Gaps = 55/525 (10%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q VL L L +G+ GD +A+ + N L + A A IG I+ P+N R+S
Sbjct: 31 TAQDAQLGVLRLTHFLHALGVGPGDRIAVLSQNRPEVLLLLFAAARIGAILVPINTRYSA 90
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E + + +P +L D ++ S + +P L +SL + L + +
Sbjct: 91 FEIATVLDDAQPSLLFCDTTTLSLASSARSNCVPQL---ISLDEPT---------LQSQL 138
Query: 154 LKG--YSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE 211
+G +S+++ S P V++ +TSGTTGS +G ++SHS L+ + +
Sbjct: 139 RQGPIHSIQAA--MASPRPTDPVLMLYTSGTTGSLRGALLSHSNLLTNVHQILTTLQPVP 196
Query: 212 DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMA 271
L PL H + +A+ L G + +++ + AL A++ + V+ + VP ++
Sbjct: 197 GTSALLVTPLFHAAIVPAALTPLASGLTLIIHERYDPERALHALQHYPVSWTVLVPTMIQ 256
Query: 272 DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF 331
+ + T + I G P L+ EA KA+L +YG+TE + +T
Sbjct: 257 ACIDALGTR-TLPESHHQRTIYYGAAPAPRSLIIEARERL-KAELAQSYGLTEATQCVTI 314
Query: 332 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV-CVGKPAPHVELKVC-----SDGSSHVG 385
+T PQ +S P+ + GKP H +++ D VG
Sbjct: 315 LT------------PQDHRRAITSS---PELLLSCGKPVAHTAVRILVNSTLEDTPHRVG 359
Query: 386 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 445
++ G VM+ YW + +V E WL TGD+G +D G +++ R + SGGEN
Sbjct: 360 EVVVFGPQVMIGYWQRPTETANVFF-EGWLRTGDVGYLDADGYLYITDRLKDLVISGGEN 418
Query: 446 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 505
VY VE V+ HP + + V+G+ + + E V A + L S+Q SE
Sbjct: 419 VYTPRVEDVIRSHPAVREVAVIGLPHPKWGETVHAVIALNPSYQPSEQ------------ 466
Query: 506 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L+ +++R HCR+ L GF+ PR + + P T+TGKI + +R
Sbjct: 467 LAGDIVR-HCRQ-FLGGFEIPR-SIEFTDQLPKTATGKILKRNLR 508
>gi|379745564|ref|YP_005336385.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
ATCC 13950]
gi|379752849|ref|YP_005341521.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-02]
gi|378797928|gb|AFC42064.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
ATCC 13950]
gi|378803065|gb|AFC47200.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
MOTT-02]
Length = 467
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 235/536 (43%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T + V+ + A E+G+ GD VAI A NS EWI+A AF
Sbjct: 11 DAEAVVDGPLRLTFTEVVERIRCAAGAFAELGIDKGDRVAIWAPNSA---EWIIA-AFGL 66
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ +EA I + ++ V++ +L+ +TA P+ + L
Sbjct: 67 LTAGGVLVPVNTRFKTEEAGDIIVRSKVKAVLV------QKGFLDQDYTA-PAGTPVIDL 119
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + I FTSGTTG PKG +++H
Sbjct: 120 ---KSDFLSS---------------GSPFERPVSGTDISDIIFTSGTTGRPKGAMLNHGQ 161
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEA 254
+ + E D YL P H GL + + + GA + + F+ + +E
Sbjct: 162 TLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSFLRGATMLPVAVFDIDTVVEL 221
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ +T L P + L ++ K +++ + G +P EL++ P
Sbjct: 222 IERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAVTGAADIPVELVRRIHGELPFE 277
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG +F +V + G P VE+
Sbjct: 278 TLMTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GLPCDGVEV 316
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG ++ RG VM Y D A E WL TGD+GS DD G + +VGR
Sbjct: 317 RIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGWLHTGDLGSFDDAGRLRIVGR 371
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL HP + V+GI + R+ ++ A V +
Sbjct: 372 KKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERMGQVGKAFVVRKGE------- 424
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+S++ L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 425 -----------VSADELIGWCRDR-MAGFKVPRA-VQFLDSLPLNATGKVMKDQLR 467
>gi|269836393|ref|YP_003318621.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
gi|269785656|gb|ACZ37799.1| AMP-dependent synthetase and ligase [Sphaerobacter thermophilus DSM
20745]
Length = 546
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 157/550 (28%), Positives = 238/550 (43%), Gaps = 87/550 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYR 90
T ++F + ARGLL G+R GD V I + N EW++ A A IG I+ +N
Sbjct: 47 TYREFWEQTGLAARGLLARGVRKGDRVGIWSPNR---YEWVVIQYATARIGAILVNINPA 103
Query: 91 W--------------SFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLG 136
+ SF +RA + V ++ +E D EL+ T + W L
Sbjct: 104 YKTAELEYALNQSGTSFLILARAFRTTDYVAML-NEVRDRC-PELRQTLVLDDEWEGLL- 160
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+D + A+I SL F + I +TSGTTG PKG +SH +
Sbjct: 161 ---ADGAGVPEATLAEIEA-----SLQFDEP------INIQYTSGTTGFPKGATLSHHNI 206
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIP--KFESKSALE 253
+ + Y E+D P H G+ +A GAC + +P ++ + LE
Sbjct: 207 LNNGFFIGEGLRYTENDRVCIPVPFYHCFGMVLGNLACTTHGAC-IVVPGEAYDPVAVLE 265
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
V+ TSL VP + + L + + +++ + G P E+MK +
Sbjct: 266 MVQAERCTSLYGVPTMF--IGELEHPRFSEFDLSTLRTGIMAGSPCPVEVMKRVQSQMHM 323
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ YGMTETS T + DP + G VGK PH+E
Sbjct: 324 TEVAICYGMTETSPVSTQTAIDDPLEKRVGS--------------------VGKVHPHIE 363
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + + G + TRG VML YW+ A W+ TGD+ ++DD G
Sbjct: 364 VKIIDPATGEIVPRGTPGELCTRGYSVMLGYWNNEEATRQAIDAARWMHTGDLATMDDEG 423
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V +VGR I GGEN+YP EVE L HP + + V+G+ + R E V+A V+LRE
Sbjct: 424 YVNIVGRIKDMIIRGGENIYPREVEEFLYTHPAVADVQVIGVPDERYGEEVMAWVKLREG 483
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
Q ++ E L +CR + T +K PR + + FP+T TGKI++
Sbjct: 484 AQ----------------VTGEELAAYCRGRIAT-YKIPR-YWKFTDTFPMTVTGKIQKF 525
Query: 548 EVRREVMSHL 557
+R + L
Sbjct: 526 RMREMAIEEL 535
>gi|167721819|ref|ZP_02405055.1| acyl-CoA synthetase [Burkholderia pseudomallei DM98]
Length = 576
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 156/558 (27%), Positives = 249/558 (44%), Gaps = 83/558 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+++G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIQLGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVSVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSSSDFVNKRDMLTADIL-KGYSLRSLPFTHSWAPEGAVIIC-------FTSGTTGSP 186
+ SD + + AD+L +G R+ + GA + C FTSGTTGSP
Sbjct: 179 M----SDAAHAGMLSFADVLARG---RAALASARLDAIGATLDCRDPINIQFTSGTTGSP 231
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-P 244
KG ++H ++ + + ++ E D PL H G+ S +A + GA VF
Sbjct: 232 KGATLTHRNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGA 291
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELM 304
FE + L AV T+L VP + +A L +++ + G P E M
Sbjct: 292 AFEPGATLAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETM 349
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
K +++ AYGMTETS P +F + T +S+ + +
Sbjct: 350 KRVVAKMHMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTT 389
Query: 365 VGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
VG+ PH+E K+ + V G + TRG VML YWD A+ + + W+ TGD
Sbjct: 390 VGRIQPHLEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGD 448
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ ++D+ G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V
Sbjct: 449 LATLDEEGFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVC 508
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + LR ++ + LR+ C + +K PR +V + P+T
Sbjct: 509 AWIVLRAGET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMT 550
Query: 540 STGKIRRDEVRREVMSHL 557
TGK+++ +R ++ L
Sbjct: 551 VTGKVQKFVMRERMIDEL 568
>gi|359436951|ref|ZP_09227027.1| acyl-CoA synthetase [Pseudoalteromonas sp. BSi20311]
gi|358028325|dbj|GAA63276.1| acyl-CoA synthetase [Pseudoalteromonas sp. BSi20311]
Length = 577
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/560 (25%), Positives = 243/560 (43%), Gaps = 66/560 (11%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIG 81
+VV N + +QF Q + LA GLL +G++ G+ V I S N +W L A A IG
Sbjct: 53 AVVVAHQNIRLSYKQFQQQINQLAMGLLALGVKPGERVGIWSPNNIQWCLTQ-FATAKIG 111
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYL----------------ELQHT 124
I+ +N + E A+ S+ L+T E S Y+ EL
Sbjct: 112 AIMVCINPAYRPSELQYALNSVECSTLITATEFKGSHYINMLQSLAPELSGCNKGELTAV 171
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
+P+L+ + +G D + + + + + L + + I FTSGTTG
Sbjct: 172 KLPTLKNVICIGDEPVDGMFSFNEVMSMPTDAHKLELQAVAKTLDCNQDINIQFTSGTTG 231
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
+PKG ++H ++ +L + + E D PL H G+ + + P
Sbjct: 232 NPKGATLTHKNILNNALLVAQAMHFTERDKLCIPVPLYHCFGMVLGSLLCVSKGAAAIYP 291
Query: 245 K--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
F+ K+ LE V+Q T L VP + L + +++ + G P +
Sbjct: 292 SDSFDPKTTLEVVQQEKCTGLHGVPTMFISELELNNFNEY--DLSTLRTGVMAGSTCPEQ 349
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ +++ AYG TE S + +T D ++E Q
Sbjct: 350 VMRKVQTLMNMNQVVIAYGQTE-CSPINNITETDSSIER-------------------QV 389
Query: 363 VCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
VG+ H E+K+ + G + +RGA +M YW+ + + WL +
Sbjct: 390 TTVGRALAHTEVKIIDEVGDIQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNDGWLHS 449
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G +D G V +VGR I GGEN+YP E+E VL +PGI + GI++ + E
Sbjct: 450 GDLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGISDEKFGEE 509
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A ++ +E +L + +R ++K L FK P+ ++ + + +P
Sbjct: 510 VCAWIQPKEGE----------------VLDEQAIRLFLKDK-LAYFKQPK-YIRFVENYP 551
Query: 538 LTSTGKIRRDEVRREVMSHL 557
+T TGK+++ ++R ++ L
Sbjct: 552 MTVTGKLQKFKMREQMQEEL 571
>gi|417747261|ref|ZP_12395734.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
gi|336461200|gb|EGO40076.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
avium subsp. paratuberculosis S397]
Length = 491
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 224/534 (41%), Gaps = 82/534 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T QQ V+ + A E+G+ GD VA+ A NS EWI+A AF
Sbjct: 35 DAEAVVDGPLRLTFQQVVERIRCAAGAFAELGVEKGDRVAVWAPNSA---EWIIA-AFGL 90
Query: 80 --IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS 137
GG++ P+N R+ +EA+ I R ++ V G
Sbjct: 91 LTAGGVLVPVNTRFKTEEAADIIVRARVKAVL-----------------------VQKGF 127
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D+ + DI + PF+ I FTSGTTG PKG +++H +
Sbjct: 128 LGQDYAAPAGIPVIDIKSDFLSSGSPFSRPVNGTDISDIIFTSGTTGRPKGAMMNHRQTL 187
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
+ E D YL P H GL + + + GA + +P F+ + ++ +E
Sbjct: 188 RMYDEWATLADLREGDRYLQINPYFHTFGLKAGLITSFLRGATMLPVPVFDVDTVVDLIE 247
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ +T L P + L T+ K R V G +P EL++ + P L
Sbjct: 248 RERITMLPGPPTLYHSLLTVPDKSKLATLRAGV----TGAADIPVELVRRIHDELPFQTL 303
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
++ YG+TE + TL PG +F +V G P VE+++
Sbjct: 304 MTGYGLTEAGNV---------TLSRPGD---SFEDVA---------TTAGVPCEGVEVRI 342
Query: 377 CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
DG +L RG VM Y D + WL TGD+G+ + G + +VGR+
Sbjct: 343 ADDGE-----VLVRGYGVMQGYLDDPAGTAEAIDADGWLHTGDLGTFTETGRLRIVGRKK 397
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
GG N YP E+E LL HP + V+G+ + R+ ++ A V +N +
Sbjct: 398 DMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGVPDERMGQVGKAFV---------VANAE 448
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
S + L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 449 VSESD---------LLAWCRDR-MAGFKVPRT-VEFLDALPLNATGKVMKDQLR 491
>gi|118463257|ref|YP_880231.1| long-chain-fatty-acid--CoA ligase [Mycobacterium avium 104]
gi|118164544|gb|ABK65441.1| acyl-CoA synthase [Mycobacterium avium 104]
Length = 491
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 224/534 (41%), Gaps = 82/534 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T QQ V+ + A E+G+ GD VA+ A NS EWI+A AF
Sbjct: 35 DAEAVVDGPLRLTFQQVVERIRCAAGAFAELGVEKGDRVAVWAPNSA---EWIIA-AFGL 90
Query: 80 --IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS 137
GG++ P+N R+ +EA+ I R ++ V G
Sbjct: 91 LTAGGVLVPVNTRFKTEEAADIIVRARVQAVL-----------------------VQKGF 127
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D+ + DI + PF+ I FTSGTTG PKG +++H +
Sbjct: 128 LGQDYAAPAGIPVIDIKSDFLSSGSPFSRPVNGTDISDIIFTSGTTGRPKGAMMNHRQTL 187
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
+ E D YL P H GL + + + GA + +P F+ + ++ +E
Sbjct: 188 RMYDEWATLADLREGDRYLQINPYFHTFGLKAGLITSFLRGATMLPVPVFDVDTVVDLIE 247
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ +T L P + L T+ K R V G +P EL++ + P L
Sbjct: 248 RERITMLPGPPTLYHSLLTVPDKSKLATLRAGV----TGAADIPVELVRRIHDELPFQTL 303
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
++ YG+TE + TL PG +F +V G P VE+++
Sbjct: 304 MTGYGLTEAGNV---------TLSRPGD---SFEDVA---------TTAGVPCEGVEVRI 342
Query: 377 CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
DG +L RG VM Y D + WL TGD+G+ + G + +VGR+
Sbjct: 343 ADDGE-----VLVRGYGVMQGYLDDPAGTAEAIDADGWLHTGDLGTFTETGRLRIVGRKK 397
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
GG N YP E+E LL HP + V+G+ + R+ ++ A V +N +
Sbjct: 398 DMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGVPDERMGQVGKAFV---------VANAE 448
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
S + L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 449 VSESD---------LLAWCRDR-MAGFKVPRT-VEFLDALPLNATGKVMKDQLR 491
>gi|359446340|ref|ZP_09236030.1| hypothetical protein P20439_2365 [Pseudoalteromonas sp. BSi20439]
gi|358039848|dbj|GAA72279.1| hypothetical protein P20439_2365 [Pseudoalteromonas sp. BSi20439]
Length = 577
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 141/560 (25%), Positives = 243/560 (43%), Gaps = 66/560 (11%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIG 81
+VV N + +QF Q + LA GLL +G++ G+ V I S N +W L A A IG
Sbjct: 53 AVVVAHQNIRLSYKQFQQQINQLAMGLLALGVKPGERVGIWSPNNIQWCLTQ-FATAKIG 111
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVT-DESSDSWYL----------------ELQHT 124
I+ +N + E A+ S+ L+T E S Y+ EL
Sbjct: 112 AIMVCINPAYRPSELQYALNSVECSTLITATEFKGSHYINMLQSLAPELSGCNKGELTAV 171
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
+P+L+ + +G D + + + + + L + + I FTSGTTG
Sbjct: 172 KLPTLKNVICIGDEPVDGMFSFNEVMSMPTDAHKLELQAVAKTLDCNQDINIQFTSGTTG 231
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
+PKG ++H ++ +L + + E D PL H G+ + + P
Sbjct: 232 NPKGATLTHKNILNNALLVAQAMHFTERDKLCIPVPLYHCFGMVLGSLLCVSKGAAAIYP 291
Query: 245 K--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
F+ K+ LE V+Q + L VP + L + +++ + G P +
Sbjct: 292 SDSFDPKTTLEVVQQEKCSGLHGVPTMFISELELNNFNEY--DLSTLRTGVMAGSTCPEQ 349
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+M++ +++ AYG TE S + +T D ++E Q
Sbjct: 350 VMRKVQTLMNMNQVVIAYGQTE-CSPINNITETDSSIER-------------------QV 389
Query: 363 VCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
VG+ H E+K+ + G + +RGA +M YW+ + E WL +
Sbjct: 390 TTVGRALAHTEVKIIDEVGEIQKIGQPGEVCSRGAGIMRCYWNDEEKTKATIDNEGWLHS 449
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G +D G V +VGR I GGEN+YP E+E VL +PGI + GI++ + E
Sbjct: 450 GDLGVMDSEGFVSIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGISDEKFGEE 509
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
V A ++ +E +L + +R ++K L FK P+ ++ + + +P
Sbjct: 510 VCAWIQPKEGE----------------VLDEQAIRLFLKDK-LAYFKQPK-YIRFVENYP 551
Query: 538 LTSTGKIRRDEVRREVMSHL 557
+T TGK+++ ++R ++ L
Sbjct: 552 MTVTGKLQKFKMREQMQEEL 571
>gi|323702368|ref|ZP_08114033.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
gi|323532674|gb|EGB22548.1| AMP-dependent synthetase and ligase [Desulfotomaculum nigrificans
DSM 574]
Length = 554
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 147/575 (25%), Positives = 244/575 (42%), Gaps = 74/575 (12%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L RIA +++V N T QF Q +A+GL+ +GL+ G+ +AI A N +
Sbjct: 13 LDRIATKFPDHDALVYTDRNLRYTYHQFNQLCRQVAKGLMALGLKRGEHIAIWATNVPEW 72
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV-----------------TDES 113
+ A +G ++ +N + E + LV E
Sbjct: 73 VTLQFATGKMGAVLVTVNTNYKTFEVEYLLKQSDTTTLVMIGGTKTSNYINIINELCPEL 132
Query: 114 SDSWYLELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPE 171
DS +L +P L+ + +G + + N RD+L A+ + L + S P+
Sbjct: 133 RDSQPGKLNSARLPMLKNVIFIGEDTPAGMWNWRDILAMANQVTDEELDAR--QASLDPD 190
Query: 172 GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSA 230
+ + +TSGTTG PKGV+++H +I + + + + E D P H G +
Sbjct: 191 DCINMQYTSGTTGFPKGVMLTHFNIINNAHSIADCMNFTEQDKLCIPVPFFHCFGCVLGT 250
Query: 231 MAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVK 290
M ++ GA V + F LE +EQ T++ VP + + L + K S++
Sbjct: 251 MTCVVSGATMVPVEVFHPVRVLETIEQERCTAVHGVPTMF--IMELEELDKKKYDTSSLR 308
Query: 291 KILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
+ G P E+MK N ++ YG TE S ++T DP
Sbjct: 309 TGIMAGSPCPIEVMKAVVNRMGAREITITYGQTEASPAITMTRTDDPI------------ 356
Query: 351 NVTPNSVHQPQGVCVGKPAPHVELKV--------CSDGSSHVGRILTRGAHVMLRYWDQF 402
+ VG+ P+VE K+ C G G I RG +VM Y+
Sbjct: 357 --------DLRVTTVGRTIPNVEAKILDPETGAECPPGVQ--GEICARGYNVMKGYYKMP 406
Query: 403 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 462
A WL TGD+G +D G + GR I GGEN+YP E+E L HP +
Sbjct: 407 EATAQAIDANGWLHTGDLGVMDHNGYFKITGRLKDMIIRGGENIYPREIEEFLYTHPLVK 466
Query: 463 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
+ VVG+ +A+ E V+A ++ +E L+ E ++ +C+ K +
Sbjct: 467 DVQVVGVPSAKYGEEVLAFIQPKEGAN----------------LTKEEIQAYCQNK-IAK 509
Query: 523 FKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+K P +VL+ +P T++GK+++ +R + + L
Sbjct: 510 YKIPS-YVLFTDSYPTTASGKVQKYRLREKAIREL 543
>gi|347756220|ref|YP_004863783.1| acyl-CoA synthetase /AMP-acid ligase II [Candidatus
Chloracidobacterium thermophilum B]
gi|347588737|gb|AEP13266.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Chloracidobacterium thermophilum B]
Length = 514
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 147/507 (28%), Positives = 221/507 (43%), Gaps = 67/507 (13%)
Query: 51 EIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT 110
+G+R GD VA+ A NS YL+ A+ +GGI+ LN+R S +E + + PV ++
Sbjct: 54 RLGVRPGDRVAVLARNSIAYLDVWFALGQLGGILQNLNWRLSRRELATLVADAAPVAILA 113
Query: 111 DESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP 170
D + EL VSL S + + + + W
Sbjct: 114 DAAHGETATELAQA---HRLQRVSLDDRDSTSIAFGERAACPTTR-MPPPPITPEAPW-- 167
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 230
++C+T G+TG+PKG V+SH A+ ++ + G DDV L APL H GGL+
Sbjct: 168 ----VVCYTGGSTGTPKGAVLSHRAIFANAVNTVLSWGIRPDDVTLLDAPLFHTGGLNVL 223
Query: 231 MAMLM-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-- 287
A L+ +G + F + +A+E+H VT L VP + +L R W D
Sbjct: 224 TAPLVAIGGTSIVASGFAPEQTFDAIERHGVTILFGVPTMFIELQRHPR----WATADFS 279
Query: 288 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 347
++ +++GG P + + + YG+TE + + P E
Sbjct: 280 RLRFVISGGAPCPMPVFEAFWAK--GVAFRTGYGLTEAGPN----NFWLPAAE------- 326
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQF 402
VH+ G VG P VE + SDG++ VG + RG H+ YW+
Sbjct: 327 ---------VHRKPGA-VGYPLWSVEACIVRSDGTACTADEVGELCLRGPHLFSGYWNNP 376
Query: 403 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 462
+A + E WL TGD+ + D G +VGR SGGENVYP EVE+VL + P +
Sbjct: 377 MATAAALDAEGWLHTGDLATCDGDGCFRIVGRLKDMFISGGENVYPAEVESVLHECPAVA 436
Query: 463 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
V+G+ + E+ VA V L E S L CR + L G
Sbjct: 437 EAAVLGVPDPTWGEVGVAFVVLTEE------------------RSDAELTAFCRAR-LAG 477
Query: 523 FKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+K P+ F+ R P L TG + D+V
Sbjct: 478 YKVPKRFI--RLP-ALPKTGAHKVDKV 501
>gi|402564913|ref|YP_006614258.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
gi|402246110|gb|AFQ46564.1| AMP-binding domain-containing [Burkholderia cepacia GG4]
Length = 575
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 246/553 (44%), Gaps = 72/553 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA GL +G+ GD V I + N SEW L A A IG ++ +N +
Sbjct: 60 TWREFAHEIDVLAAGLAALGIVKGDCVGIWSPNRSEWLLTQ-FATARIGAVLVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ + S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCKAVIAAERFKTSAYVEMLQTIAPELASATPGDLHAARVPSLRTVVSM 178
Query: 136 GS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
G + + D++ D L L ++ T A + I FTSGTTGSPKG ++
Sbjct: 179 GEVAPAGMFRFADVMARGRDTLDVARLDAIGAT--LAATDPINIQFTSGTTGSPKGATLT 236
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKS 250
H ++ + + + + E D PL H G+ A +A + G VF + F+ +
Sbjct: 237 HRNVVNNARSIAMAMRFTEQDSLCIPVPLYHCFGMVLAVLACVSKGTAMVFPGEAFDPVA 296
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV T+L VP + +A L +++ + G P E MK +
Sbjct: 297 TLAAVADERCTALHGVPTMF--IAELDHPAFATFDLATLRTGIMAGSPCPIETMKRVVSQ 354
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++ AYGMTETS P +F + T + + + + VG+ P
Sbjct: 355 MHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRIQP 394
Query: 371 HVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
H+E+K+ V G + T+G VML YWD AK + W+ TGD+ ++D
Sbjct: 395 HLEVKIVDPNGDVVQVGATGELCTKGYSVMLGYWDDD-AKTREVLVDGWMHTGDLATLDA 453
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +VGR + GGENVYP E+E L +HP I V G+ +A+ E + A + LR
Sbjct: 454 DGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDAKYGEELCAWIVLR 513
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
Q SE + +R C + + +K PR +V + P+T TGK++
Sbjct: 514 ADEQMSEDD----------------VRAFCNGQ-IAHYKIPR-YVRFVDELPMTVTGKVQ 555
Query: 546 RDEVRREVMSHLK 558
+ +R ++ LK
Sbjct: 556 KFVMRERMIEELK 568
>gi|308179067|ref|YP_003918473.1| fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
gi|307746530|emb|CBT77502.1| putative fatty-acid--CoA ligase [Arthrobacter arilaitensis Re117]
Length = 535
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 146/532 (27%), Positives = 237/532 (44%), Gaps = 71/532 (13%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAI- 100
LA+GLL GL+ GD V I A N EW+ A A IG I+ +N + E + A+
Sbjct: 56 LAKGLLAAGLQPGDRVGIWAPNC---AEWVFTQYATAKIGVILVNVNPAYRTHEYAYAVN 112
Query: 101 -TSIRPVMLVTDESSDSW--YLELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKG 156
+ +R ++ VT+ + ++ +E T P L + + + + + + ++ + L
Sbjct: 113 HSQMRLLLAVTEFKTSNYRAMIEQTRTDTPGLERVAYVDTDDYAQLLAEGERISDEALA- 171
Query: 157 YSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 216
R L T PE + I +TSGTTG PKG V+SH ++ ++ E D
Sbjct: 172 ---RRLAATK---PEDPINIQYTSGTTGYPKGAVLSHRNILNNGYQVTGMIDLDEHDRLC 225
Query: 217 HTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAV-EQHCVTSLITVPAIMADL 273
P H G+ + IP F++++ L V E+HC T L VP + +
Sbjct: 226 IPVPFYHCFGMVMGNLGCTSRGTTIVIPAPGFDAETTLRVVAEEHC-TGLYGVPTMFIAM 284
Query: 274 ATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF 331
+K D +++ + G P E+M+ + + AYGMTETS ++
Sbjct: 285 QN----HPNFKDYDLSALRTGIMAGSICPVEVMRRCVEEMGMSAVSIAYGMTETSP-VSC 339
Query: 332 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------G 385
T D LE + +G+ PHVE+KV S G
Sbjct: 340 QTRSDDDLER-------------------RTSTIGRVHPHVEIKVVDPVSGETLERGETG 380
Query: 386 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 445
TRG VML YW+ + E W+ TGD+ + + G +VGR + GGEN
Sbjct: 381 EYCTRGYSVMLGYWNDEEKTRAAIDDEGWMHTGDLAVMREDGYCTIVGRIKDMVIRGGEN 440
Query: 446 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 505
+YP E+E L +HP I + V+G+ +++ E+V AC+R++ Q
Sbjct: 441 IYPAEIEEFLYKHPDIEDVSVIGVPDSKFGEVVCACIRMKAGRQ---------------P 485
Query: 506 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
L+ + +R++ L +K P +V + FP T TGKIR++++R + L
Sbjct: 486 LTVDAIREYS-AGQLAHYKVP-AYVRILEEFPTTVTGKIRKNQLREDAARSL 535
>gi|452992874|emb|CCQ95628.1| AMP-dependent synthetase and ligase [Clostridium ultunense Esp]
Length = 507
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 145/552 (26%), Positives = 239/552 (43%), Gaps = 78/552 (14%)
Query: 13 LSRIAAVKRNSVVTITGNRHN--TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
R AA+ N + + G T + + A L++ G+ GD +AI N Y
Sbjct: 8 FERRAALTPNRIALVDGESKEEVTYEGLYRRANEAAFRLIQFGIEKGDRIAILTPNEIPY 67
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLR 130
E + A IG I PLNYR S E + + +L S + ++L IPS
Sbjct: 68 FEVLFATYLIGAIFIPLNYRLSVHELTYILQDSGAKVLFYHPSFEDQ-IDLLREEIPS-- 124
Query: 131 WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV----IICFTSGTTGSP 186
+ + S+ F ++ + I +PEGA ++ +T GTTG P
Sbjct: 125 --IQMISTHGIFFQSKETIANKI---------------SPEGAAGDPWVMLYTGGTTGRP 167
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPK 245
KGVV+++ ++ ++ + G D+ PL H GGL++ + +L G + +
Sbjct: 168 KGVVLTYRNILWNAINTVVSWGLSPRDITYTVMPLFHTGGLNALTLPVLYAGGKVIVGKQ 227
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F+ ++ VE+ VT L+ VP + + ++ D + L+GG P +
Sbjct: 228 FKPYETIQTVEREKVTILLLVPTMHLQVLQEPALQHADFSHDPI--FLSGGAPCPLSIYD 285
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
+ K YG+TE P F ++P+ Q +G V
Sbjct: 286 GYQKRGIRFK--EGYGLTEAG-------------------PNNF-YLSPDEAFQKKG-SV 322
Query: 366 GKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWD-QFLAKPSVSTGEVWLDTGD 419
GKP H + + + S VG ++ G HV YW+ Q + ++ G+++ TGD
Sbjct: 323 GKPMIHNGITLVDEHGKEVPSGEVGELVIEGPHVFFCYWNNQEETEKAIRDGKLY--TGD 380
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+G D+ G ++VGR+ SGGEN+YP E+E VL HP + VV+G+ + + E +
Sbjct: 381 LGRRDEEGYYYIVGRKKEMFISGGENIYPLEIENVLQNHPSLAEAVVIGVPDDKWGEKGI 440
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + +KN E LL E L ++C + L FK P+ F+ + P T
Sbjct: 441 AFL---------------VAKNGEELLKEE-LTKYC-SRYLARFKIPKEFIFLDQ-LPKT 482
Query: 540 STGKIRRDEVRR 551
GKI + E+ R
Sbjct: 483 GVGKIDKKELLR 494
>gi|403718190|ref|ZP_10943189.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
gi|403208635|dbj|GAB97872.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
Length = 552
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 241/550 (43%), Gaps = 67/550 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+ ++V + R T +QF DV LA+GLL G+ GD + I ++N EW L A
Sbjct: 37 QAEAMVDLPSGRRWTYEQFNADVDALAKGLLADGVAKGDRIGIWSVNCP---EWTLLQYA 93
Query: 77 VAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSW--YLELQHTAIPSLRWH 132
A +G I+ +N + E + + + +R ++ T S + +E LR
Sbjct: 94 TAKVGAILVNVNPAYRSHELAYVVNQSGMRLLVSATRHKSSDYRKMVEEVRGECSGLRDV 153
Query: 133 VSLGSSSSDFVNKR--DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
V L D + R D+ AD+ S + + I +TSGTTG PKG
Sbjct: 154 VYLDGPDWDELVARGADVPDADLAARQS--------ELDAQDPINIQYTSGTTGFPKGAT 205
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFES 248
+SH ++ + GY +D P H G+ +A GAC + P FE
Sbjct: 206 LSHRNILNNGYFVGELCGYTHEDRICIPVPFYHCFGMVMGNLAATSHGACMIIPAPSFEP 265
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
+ + AV+ TSL VP + +A L S++ + G P E+MK+
Sbjct: 266 AATMRAVQDERATSLYGVPTMF--IAELALPDFADYDVSSLRTGIMAGSPCPVEVMKQVV 323
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+ ++ YGMTETS ++ MT D L + VG+
Sbjct: 324 SQMHMREVAICYGMTETSP-VSTMTRRDDDLRRRTE-------------------TVGRV 363
Query: 369 APHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+K+ + G + TRG VML YW+ + W+ TGD+ +
Sbjct: 364 MPHLEVKIVDPVTEQETPRGVSGELCTRGYSVMLGYWESPEKTAEAIDADGWMHTGDLAT 423
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+DD G +VGR + GGEN+YP E+E L HPGI + VVG+ + + E ++A
Sbjct: 424 MDDDGYCAIVGRIKDMVIRGGENIYPREIEEFLYSHPGISDVQVVGVPDVKYGEELMA-- 481
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
W ++ + L ++ +R+ C K L +K PR +V FP+T TG
Sbjct: 482 -----WIIAKPGSEG--------LDADDIREFCSGK-LAHYKIPR-YVHVVDSFPMTVTG 526
Query: 543 KIRRDEVRRE 552
KIR+ ++R E
Sbjct: 527 KIRKVQMRAE 536
>gi|423628110|ref|ZP_17603859.1| hypothetical protein IK5_00962 [Bacillus cereus VD154]
gi|401269974|gb|EJR75999.1| hypothetical protein IK5_00962 [Bacillus cereus VD154]
Length = 518
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 251/535 (46%), Gaps = 60/535 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ D +A+S N + A A +G I+ P N +
Sbjct: 32 RRITYKQLKYEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 91
Query: 91 WSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
+ E + S P +L+ + E ++ E + ++ +++ S ++ + +++
Sbjct: 92 YKSYEIEYILESSAPKLLIASGEFEKNFGFE---KVVNKVQKVITVRFSQENYCSYEELI 148
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VG 208
+ + + H + I +TSGTTG+PKGV+++H A +VQS I +
Sbjct: 149 RTEKM------DIEPVHINVNDDLFCILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELH 201
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ DV++ +APL HI G++ + + + +G + KF + L+ +EQ VT VP
Sbjct: 202 CTQKDVFIISAPLFHIFGMAINMLCAVAMGGRFILQEKFHPRETLQLIEQEKVTIQKGVP 261
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L K S++ L G +P++ + E L ++G+TET S
Sbjct: 262 TMFIKELELEDFDKY--NLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETVS 318
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----S 382
M+ YD T E N+T +GK P V LK+ +
Sbjct: 319 --ITMSSYDDTKE----------NITET---------LGKAIPGVTLKIVDENRVALPPG 357
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I +G VM Y++ V E W +GD+G++D G + VGR+ I G
Sbjct: 358 EVGEIAVKGFGVMKGYYNMPEQTNQVLDNEEWYYSGDLGTLDSQGYLRFVGRKKEMIIRG 417
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
G NVYP+E+EAV+++HP +I V+G+ + L E+ A +RL KN
Sbjct: 418 GLNVYPQEIEAVIMKHPKVIEAAVIGLPDKVLGEVACAVIRL---------------KNG 462
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E+ E+ + + +E+ + +K P V++ FP+T++GKI++ +++ +V S++
Sbjct: 463 EISTEEEI-KIYLKER-MAIYKLPEK-VIFTDEFPVTASGKIQKLKLKEQVSSNI 514
>gi|374607766|ref|ZP_09680566.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
gi|373554328|gb|EHP80907.1| AMP-dependent synthetase and ligase [Mycobacterium tusciae JS617]
Length = 542
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 239/552 (43%), Gaps = 65/552 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+++V + R T + DV +ARGL+ +G+ G+ V I A N EW + A A
Sbjct: 33 DALVDMASGRRWTYAELNDDVDVVARGLMALGIDRGERVGIWAPNCP---EWTIVQYATA 89
Query: 79 FIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSW--YLELQHTAIPSLRWHVS 134
IG I+ +N + E + + + IR + T + + ++ P L+ +
Sbjct: 90 KIGAILVNINPAYRTHELAYVLKQSGIRTLFSATSFKTSDYVSMVDDVRAETPQLQEVLY 149
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
LG+ D + + D + AD L+ + SL + I +TSGTTG PKG +SH
Sbjct: 150 LGTDDWRDLIERTDAVAADDLRA-RMNSLDHHQP------INIQYTSGTTGFPKGATLSH 202
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL-SSAMAMLMVGACHVF-IPKFESKSA 251
++ ++ +G D P H G+ + GA V P F+
Sbjct: 203 CNILNNGYFTTELINFGPTDRLCIPVPFYHCFGMVMGNLGCTSHGATMVIPAPAFDPALT 262
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L+A+E+ T + VP + +A L + + S++ + G P E+MK +
Sbjct: 263 LDAIEKERCTGVYGVPTMF--IAMLGQPDLAQRDLSSLRTGVMAGSVCPVEVMKRCVSDM 320
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++L AYGMTETS ++ T D LE + +G+ PH
Sbjct: 321 NASELAIAYGMTETSP-VSCQTRIDDDLER-------------------RTSSIGRAHPH 360
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
VE+K+ + V G TRG VM+ YW+ + W+ TGD+ + D
Sbjct: 361 VEIKIVDAETGEVVERGQTGEFCTRGYSVMIGYWEDEAKTAESIDDDGWMHTGDLAVMRD 420
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +VGR + GGEN+YP E+E L HP + V+G+ + + E + A VR+
Sbjct: 421 DGYCNIVGRIKDMVIRGGENIYPREIEEFLYTHPDVDDAQVIGVPDEKYGEEICAWVRM- 479
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
K + + + LR K L +K PR +V FP+T TGK+R
Sbjct: 480 --------------KPGKGPVDARALRDFATGK-LAHYKIPR-YVHVVDEFPMTVTGKVR 523
Query: 546 RDEVRREVMSHL 557
+ E+R E + L
Sbjct: 524 KVEMRAETVKLL 535
>gi|403279574|ref|XP_003931322.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 602
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 160/579 (27%), Positives = 262/579 (45%), Gaps = 82/579 (14%)
Query: 9 ICQCLSRIA--AVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ QCL A +R +++ + N T Q + V A GLL IGLR GD + + N
Sbjct: 74 VGQCLEATAQRVPEREALIVLHENVRLTFAQLKEKVDKAASGLLSIGLRKGDRLGMWGPN 133
Query: 67 S-EWYL-----------EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESS 114
S W L E++L +V P ++ ++ + I P E
Sbjct: 134 SYAWVLMQLATAHAMELEYVLKKVGCKALVFPKQFKS--QQYYNILKHICP------ELE 185
Query: 115 DSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW-APEGA 173
++ L+ +P L +S+ + + +++ A + + L L +T + +
Sbjct: 186 NAQPGALKSQRLPDLTMAISVDAPLPGTLLLDEVVAAGSTQQH-LDQLQYTQQFLSCHDP 244
Query: 174 VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-----------APLC 222
+ I FTSGTTGSPKG +SH ++ S+ ++G + + LH PL
Sbjct: 245 INIQFTSGTTGSPKGATLSHYNIVNNSI----LIG---ERLKLHEKTPEKLRIVLPCPLY 297
Query: 223 H-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
H +G + M LM GA + P F K ALEA+ + L P + D+ +
Sbjct: 298 HCLGSVGGTMVCLMFGATLILSSPIFNGKKALEAISRERGGFLYGTPTMYVDILN----Q 353
Query: 281 KTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPT 338
+ D S+ GG + EL++ N +L AYG TE +S +TFM L + T
Sbjct: 354 PDFSSYDISSMYGGTIGGSPVAPELVRAIMNKLNMKELTVAYGTTE-NSPVTFMCLPEDT 412
Query: 339 LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRY 398
+E Q ++ G + P++ + + GK A EL G + RG VML Y
Sbjct: 413 VE---QKAESVGRIMPHTEARIMNMEAGKLA---ELNT-------PGELFIRGYCVMLGY 459
Query: 399 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 458
W + V + W TGDI +D+ G +VGR I GGEN+YP E+E L H
Sbjct: 460 WGEPRKTEEVVDQDKWYRTGDIAMMDEQGFCKIVGRSKDMIIRGGENIYPVELEDFLHTH 519
Query: 459 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 518
P + + VVG+ + R+ E + AC+RL+ ES + E ++ C+ K
Sbjct: 520 PKVQEVQVVGVKDDRMGEEICACIRLKSG---EES-------------TPEEIKAFCKGK 563
Query: 519 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
++ FK PR ++++ +PLT +GK+++ ++R ++ HL
Sbjct: 564 -ISHFKIPR-YIVFVTEYPLTISGKVQKFKLREQMERHL 600
>gi|111023051|ref|YP_706023.1| AMP-binding protein [Rhodococcus jostii RHA1]
gi|110822581|gb|ABG97865.1| CoA ligase [Rhodococcus jostii RHA1]
Length = 545
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 154/549 (28%), Positives = 238/549 (43%), Gaps = 56/549 (10%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R+++V R T + +DV +A GLL+ G+ GD V I A N EW L A A
Sbjct: 35 DRDALVDRPSGRRWTYAELRRDVDAVAAGLLKRGIGKGDRVGIWAPNCPEWTL-IQFATA 93
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSD-SWYLELQHTAIPSLRWHVS 134
IG ++ +N + E + +LV+ +SSD + +E P L V
Sbjct: 94 KIGAVLVNINPAYRAHELKYVLDQAGIRLLVSAPEFKSSDYAAMIEEVRPQCPDLEMVVL 153
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
LGS+ + M + + S P + I +TSGTTG PKG +SH
Sbjct: 154 LGSAEWSRLASDGMAAHEADPALLPAAQAALSSDDP---INIQYTSGTTGFPKGATLSHH 210
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI-PKFESKSAL 252
++ + Y E+D P H G+ +A GA + P F+ + L
Sbjct: 211 NILNNGYFVGELCHYTENDRVCIPVPFYHCFGMVMGNLACTSHGATMIIPGPSFDPTATL 270
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+AVE TSL VP + +A L S++ + G P E+MK+
Sbjct: 271 QAVEAEKCTSLYGVPTMF--IAELAEPDFASFDLSSLRTGIMAGSPCPVEVMKQVIEQMG 328
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
A++ YGMTETS ++ T D T++ + VG+ PH+
Sbjct: 329 MAEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVSTVGRVGPHL 368
Query: 373 ELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + G + TRG VML YW+ W+ TGDIG +D
Sbjct: 369 EVKIVDPATGLTVPRGTPGELCTRGYSVMLGYWNNPEKTAEAIDAGRWMHTGDIGVMDSD 428
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++ VR+++
Sbjct: 429 GYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMVWVRMKD 488
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ L + +R+ C K L +K P+ +V FP+T TGK+R+
Sbjct: 489 GAE---------------PLDAAKVREFCTGK-LAHYKIPK-YVHVVDEFPMTVTGKVRK 531
Query: 547 DEVRREVMS 555
E+R + +
Sbjct: 532 VEMREQSLD 540
>gi|56462785|gb|AAV91588.1| feruloyl-CoA synthetase [Rhodococcus opacus PD630]
Length = 506
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 148/555 (26%), Positives = 236/555 (42%), Gaps = 73/555 (13%)
Query: 15 RIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI 74
RI +N + G R T ++ LA GL +G+ GD V N LE +
Sbjct: 13 RITMTPKNEALVFDG-RAVTYEEMALRTRRLAHGLHALGVEKGDCVGFFGFNDPAALEVM 71
Query: 75 LAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRWHV 133
A +G PLN R + +EA + R ++ D+ +D +
Sbjct: 72 FAAGLLGATYLPLNARLTAEEARYVLGDSRCTTVIFGDQQAD-------------VAGAG 118
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV----------IICFTSGTT 183
++G ++ ++G H+ P+ + ++ ++SGTT
Sbjct: 119 AVGHPGHHLDRPGRLVVHPHVRG--------VHAGQPDTRIDEQVGLDDLSVLMYSSGTT 170
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGACHVF 242
G+PKGV++SH ++ +L ++ + L APL HIGG+ A+ L+ G V
Sbjct: 171 GAPKGVMLSHGNMLWNALNQLLAQDMTSKERTLSVAPLFHIGGIGGAVTPTLLNGGTVVL 230
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+ KF++ L+ +E+ +T+ VP ++ +L R S++ I G LP
Sbjct: 231 LRKFDAGVVLDTIEKERITTFFAVPTMIQELWHHPRFADA--DLSSLRAICVAGAPLPEA 288
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
L+ + + AYG+TET+ S+T ++ D + + F T V +P G
Sbjct: 289 LISPWQDR--DVAITQAYGLTETAPSVTMLSSADVRSKIGSAGKRTF--FTDVDVVRPDG 344
Query: 363 VCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH +G I+ +G +VML Y +Q A + WL TGD G
Sbjct: 345 SSA---EPH-----------EIGEIVAKGPNVMLGYLNQPEATARTIV-DGWLHTGDAGY 389
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
DD G +++ R SGGENVYP EVEA LL+ GI V+G+ + +
Sbjct: 390 FDDEGFLFICDRYKDMYISGGENVYPAEVEAALLRLEGIREAAVIGVPHEK--------- 440
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
W E+ L E +R REK L GFK P F+ + P T+TG
Sbjct: 441 -------WGETGMAFVVAADGTTLDEETVRARLREK-LAGFKIP-TFIQIAEALPRTATG 491
Query: 543 KIRRDEVRREVMSHL 557
KIR+ ++R+ S L
Sbjct: 492 KIRKPDLRKLAASRL 506
>gi|78042829|ref|YP_359696.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994944|gb|ABB13843.1| long-chain-fatty-acid--CoA ligase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 550
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 250/566 (44%), Gaps = 62/566 (10%)
Query: 4 YSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAIS 63
Y + + + L R A K N I N+ + + + + NLA L +GL GD V I
Sbjct: 22 YPETPLYELL-RKTAQKVNKTALIFFNKKLSYSELTEYIENLAVNLSPLGLEPGDRVGIM 80
Query: 64 ALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-----TSIRPVMLVTDESSDSWY 118
NS Y+ A+ I PLN S +E + I +I + L ++ +
Sbjct: 81 LPNSPQYVIAYFALMAARMIAVPLNPLLSARELTYIIEDAGVKAIFALNLFAEKLKNLDN 140
Query: 119 LELQHTAIPS-----LRWHVSLGSSSS--DFVNKRDMLTADILKGYSLRSL-PFTHSWAP 170
+++ +TAI L + + L + N++ +LK ++ P
Sbjct: 141 VKIIYTAIADFLAFPLNFLLKLKEKAPPVKIDNEKVFALMPLLKNTGSKNFSPKQRDLKK 200
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 230
E AVII +TSGTTG PKGV++S ALIV + +DV L P+ H G+S
Sbjct: 201 EPAVII-YTSGTTGKPKGVMLSEYALIVNAYHVKVWGDLVPEDVMLTVLPIFHGFGMSVC 259
Query: 231 M-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 289
M A L+ G+ V +P+F + +AV +H T VP + +A L T S
Sbjct: 260 MNAPLLTGSSVVLLPRFSVEEFFKAVAKHRPTLFAGVPTMF--VAMLNHKDLTKYDLSSF 317
Query: 290 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 349
+ G +P E+ KE A+++ YG+TE ++ Y +T +
Sbjct: 318 RGCFVGAAAMPPEV-KEQFEKMTGAQVLEGYGLTEAVTA-KCCNPYRGVNKT-----GSI 370
Query: 350 GNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVS 409
G P++V + G+P P E +G I + +ML Y+ Q +
Sbjct: 371 GIPFPDTVMEIVDAFTGEPLPPGE----------IGEIRLKSPDLMLGYYKQ-----EAA 415
Query: 410 TGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIV 465
T EV WL TGDIG +D+ G ++V R+ I +GG NVYP EVE VL HP +
Sbjct: 416 TREVIKDGWLYTGDIGRMDEDGYFYIVDRKKDLIITGGFNVYPREVEDVLYSHPDVKEAC 475
Query: 466 VVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKA 525
VVGI + E+V A V L+E + S E L+ CRE NLT +K
Sbjct: 476 VVGIPDNYYGEVVKAYVVLKEGAK----------------TSPEELKAFCRE-NLTHYKV 518
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRR 551
P++ + + P ++ GKI R ++
Sbjct: 519 PKIIEI-KDDLPKSAIGKILRRALKE 543
>gi|227205702|dbj|BAH56668.1| putative acyl-CoA synthetase [Rhodococcus sp. HI-31]
Length = 500
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 240/534 (44%), Gaps = 79/534 (14%)
Query: 39 VQDVLNLARGLLEI-GLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEAS 97
+ D+ A G L+ G+R GD V I+ N + + V G V P+N +E
Sbjct: 33 LDDLTARAAGWLQARGIRPGDRVGIALPNIVPFPVFYYGVLRAGATVVPMNPLLKAREIE 92
Query: 98 RAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGY 157
A+ L L T I + + ++ +D V ++ D L G
Sbjct: 93 HAL------------RDSGAALALVGTTI-AAEAQAAAAATGTDIV----VIDDDTLAGA 135
Query: 158 SL-RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYL 216
+ LP + A + ++ +TSGTTG+PKG ++HS + + +A++ ++DV L
Sbjct: 136 AQWPRLPEVTARADDDTAVLLYTSGTTGAPKGAQLTHSNMYRNATTFVAMLDIRKEDVVL 195
Query: 217 HTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
P H G S+A+ A L GAC +P+FE+ + + +E+H VT VP + +
Sbjct: 196 GCLPFFHAFGQSNALNASLAAGACVSLVPRFEAVAVVRLIERHRVTVFEGVPTMYV---S 252
Query: 276 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
L+ + S++ ++GG LP E++ +F A ++ YG++ETS + TF
Sbjct: 253 LLHADLSEADTSSLRICISGGAALPIEVLNGFQGAF-GAPILEGYGLSETSPTATF---- 307
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK-VCSDGSS----HVGRILTR 390
N + + + +G P VELK V DG+ VG I+ R
Sbjct: 308 -------------------NRIGKSKPGSIGLPIDGVELKLVARDGTETLPGEVGEIVIR 348
Query: 391 GAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
G +VM YW +P + + W TGD+ + D+ G ++V R+ I GG NVY
Sbjct: 349 GHNVMKGYWK----RPDATAAAIVDGWFHTGDMATRDEDGFYFIVDRKKDIIIRGGYNVY 404
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 507
P E+E VL +HP + + V+G+ + E V A + LR + +
Sbjct: 405 PREIEEVLYEHPAVREVAVIGLPHPTYGEEVAAAITLRPGAE----------------AT 448
Query: 508 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLKSLP 561
E LRQ+ + + + +K PR L K P +TGKI + E+ + +HL P
Sbjct: 449 PEELRQYVKSR-VAAYKYPRHVWLADK-LPKGATGKILKREI--GIPAHLLEQP 498
>gi|41406878|ref|NP_959714.1| acyl-CoA synthetase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395228|gb|AAS03097.1| FadD3_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 478
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 143/534 (26%), Positives = 224/534 (41%), Gaps = 82/534 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T QQ V+ + A E+G+ GD VA+ A NS EWI+A AF
Sbjct: 22 DAEAVVDGPLRLTFQQVVERIRCAAGAFAELGVEKGDRVAVWAPNSA---EWIIA-AFGL 77
Query: 80 --IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS 137
GG++ P+N R+ +EA+ I R ++ V G
Sbjct: 78 LTAGGVLVPVNTRFKTEEAADIIVRARVKAVL-----------------------VQKGF 114
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D+ + DI + PF+ I FTSGTTG PKG +++H +
Sbjct: 115 LGQDYAAPAGIPVIDIKSDFLSSGSPFSRPVNGTDISDIIFTSGTTGRPKGAMMNHRQTL 174
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
+ E D YL P H GL + + + GA + +P F+ + ++ +E
Sbjct: 175 RMYDEWATLADLREGDRYLQINPYFHTFGLKAGLITSFLRGATMLPVPVFDVDTVVDLIE 234
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ +T L P + L T+ K R V G +P EL++ + P L
Sbjct: 235 RERITMLPGPPTLYHSLLTVPDKSKLATLRAGV----TGAADIPVELVRRIHDELPFQTL 290
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
++ YG+TE + TL PG +F +V G P VE+++
Sbjct: 291 MTGYGLTEAGNV---------TLSRPGD---SFEDVA---------TTAGVPCEGVEVRI 329
Query: 377 CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
DG +L RG VM Y D + WL TGD+G+ + G + +VGR+
Sbjct: 330 ADDGE-----VLVRGYGVMQGYLDDPAGTAEAIDADGWLHTGDLGTFTETGRLRIVGRKK 384
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
GG N YP E+E LL HP + V+G+ + R+ ++ A V +N +
Sbjct: 385 DMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGVPDERMGQVGKAFV---------VANAE 435
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
S + L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 436 VSESD---------LLAWCRDR-MAGFKVPRT-VEFLDALPLNATGKVMKDQLR 478
>gi|196247831|ref|ZP_03146533.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
gi|196212615|gb|EDY07372.1| AMP-dependent synthetase and ligase [Geobacillus sp. G11MC16]
Length = 539
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 244/554 (44%), Gaps = 54/554 (9%)
Query: 9 ICQCL-SRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+C L R A + +T G + T + V V A L +G++ GD VAI N
Sbjct: 25 VCDVLHERAAQFSSHPALTFYG-KTITYAELVAAVNRFASSLQTLGVQKGDRVAIMLPNC 83
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + G IV +N +E + + ++ E ++
Sbjct: 84 PQYVIAYYGILQAGAIVTQVNPMLVERELAYVLNDSGAETIIIYEPLYPRLAAVREGTAI 143
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
VS G+ SS + D+ + L S + P A + AV+ +T GTTG K
Sbjct: 144 KRAVTVSFGAPSSASLAAEDVTFDEFLAEGSGQVRPVPIEPAHDVAVL-QYTGGTTGRSK 202
Query: 188 GVVISHSALIVQSLAKIAIV-GYGE--DDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFI 243
G +++H + L G E + YL PL H+ ++S M + + GA ++ +
Sbjct: 203 GAMLTHRNIFANVLQCAEFFKGTFEMGKERYLTVIPLFHVFAMTSGMNLAIYQGAENILL 262
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P+FE K LE + T VP + + V++ G S+K +G +P EL
Sbjct: 263 PRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGSAPMPLEL 320
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
M++ A ++ YG++E S +T +P P + +P V
Sbjct: 321 MRDFEEKT-GAVVLEGYGLSEASP----VTHCNP----------------PFAARKPGTV 359
Query: 364 CVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
+G P ++ + G+ VG ++ RG VM YW+ + +V+ + WL TG
Sbjct: 360 GIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVTLRDGWLYTG 418
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ SID+ G V +V R+ I +GG N+YP EVE VL +HP + VV+G+ ++ E V
Sbjct: 419 DLASIDEEGYVTIVDRKKDMIIAGGYNIYPREVEEVLYEHPAVKEAVVIGVPDSYRGETV 478
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A + L++ Q SE + + +HCR KNL +K PR+ V +R P
Sbjct: 479 KAVIVLKDGQQASEDD----------------IIRHCR-KNLASYKVPRI-VEFRTELPK 520
Query: 539 TSTGKIRRDEVRRE 552
T+ GKI R +R E
Sbjct: 521 TNVGKILRRALREE 534
>gi|73670286|ref|YP_306301.1| AMP-binding protein [Methanosarcina barkeri str. Fusaro]
gi|72397448|gb|AAZ71721.1| long-chain fatty-acid-CoA ligase [Methanosarcina barkeri str.
Fusaro]
Length = 552
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 239/547 (43%), Gaps = 66/547 (12%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNY 89
N T QF + V NLA+GLL IG+ GD V I A N +L ++ A A IG ++ +N
Sbjct: 31 NLRFTYGQFNERVNNLAKGLLAIGITKGDHVGIWAKNVPDWLTFMFATAKIGAVLVTVNT 90
Query: 90 RWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDM 148
+ E + S + + D D YLE+ + +P L+ S +F + +
Sbjct: 91 AYKSHEVEYVLKQSDMKALAMIDSYRDVDYLEIINELVPELKTSERGRLKSKNFPYLKSI 150
Query: 149 LTADILKG---YSLRSLPFTHSWAPEG-------------AVIICFTSGTTGSPKGVVIS 192
+ K Y+ L S P+ V + +TSGTTG PKGV+++
Sbjct: 151 IYVGQEKHRGMYNTNELMLLGSHYPDDKLREIMTSVDCDDVVNMQYTSGTTGFPKGVMLT 210
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSA 251
H ++ L+ + D PL H G+ MA+L A V + F+
Sbjct: 211 HKNILNNGLSIGDRQRFTYVDKLCFPVPLFHCFGIVLGVMAVLTHRATLVMLEVFDPLLV 270
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV + T+L VP + +A S++ + G P E MK+ N
Sbjct: 271 LAAVHKEKCTALYGVPTMF--IAEYTHPMFDMFDLSSLRTGIMAGSTCPVEAMKKVVNDM 328
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ S YG+TE S +T + DP LE + VGK P
Sbjct: 329 HCYQITSVYGLTEASPGMTQTAVDDP-LELRVE-------------------TVGKHFPS 368
Query: 372 VELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
VE++V ++ VG I RG +VM Y+ V + WL +GD+G+ D+
Sbjct: 369 VEVRVVDPDTNEPVPLNTVGEICCRGYNVMKGYYKMPEETKKVIDEDGWLHSGDLGTCDE 428
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + GR I GGEN+YP E+E +LL P I + VVGI + + E+V A V L+
Sbjct: 429 NGYYRITGRIKDMIIRGGENIYPREIEELLLTMPEITDVQVVGIPDKKYGEIVGAFVILK 488
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LFVLWRKPFPLTSTGKI 544
+ ++E + +R + K + +K P+ +F++ FPLT++GKI
Sbjct: 489 KGADFTEVD----------------IRDYALSK-VARYKVPKHIFIV--DEFPLTASGKI 529
Query: 545 RRDEVRR 551
++ +R
Sbjct: 530 QKYRLRE 536
>gi|421477536|ref|ZP_15925356.1| AMP-binding enzyme [Burkholderia multivorans CF2]
gi|400226391|gb|EJO56469.1| AMP-binding enzyme [Burkholderia multivorans CF2]
Length = 575
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 157/561 (27%), Positives = 248/561 (44%), Gaps = 88/561 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA GL +G+ GD V I + N SEW L A A IG I+ +N +
Sbjct: 60 TWREFAAEIDVLAAGLAALGIGKGDRVGIWSPNRSEWLLTQ-FATARIGAILVNINPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ E S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCTAVIAAERFKSSAYVEMLQTIAPELANAAPGELRAARVPSLRTVVSM 178
Query: 136 GSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
G + +D + R T D +L +L T A + I FTSGTTGSPKG
Sbjct: 179 GDVAPPGMFRFADVI-ARGRATVD---SAALDALGAT--LAATDPINIQFTSGTTGSPKG 232
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-F 246
++H ++ + + + E D PL H G+ A +A + GA VF + F
Sbjct: 233 ATLTHRNVVNNARFIARAMRFSEQDALCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAF 292
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L AV + T+L VP + +A L + +++ + G P E MK
Sbjct: 293 DPVATLAAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMKR 350
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ +++ AYGMTETS P +F + T + + + + VG
Sbjct: 351 VVSQMHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVG 390
Query: 367 KPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDT 417
+ PH+E+K+ V G + T+G VML YWD T EV W+ T
Sbjct: 391 RVQPHLEVKIVDPSGEIVPVGVTGELCTKGYSVMLGYWDD-----DAKTREVLIDGWMHT 445
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ ++D G +VGR + GGENVYP E+E L +HP I V G+ + + E
Sbjct: 446 GDLATLDAEGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEE 505
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+ A + LR Q +E + +R C + + +K PR ++ + P
Sbjct: 506 LCAWIVLRADEQMTEDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELP 547
Query: 538 LTSTGKIRRDEVRREVMSHLK 558
+T TGK+++ +R ++ LK
Sbjct: 548 MTVTGKVQKFVMRERMIDELK 568
>gi|134097188|ref|YP_001102849.1| AMP-binding protein [Saccharopolyspora erythraea NRRL 2338]
gi|291005355|ref|ZP_06563328.1| AMP-binding domain protein [Saccharopolyspora erythraea NRRL 2338]
gi|133909811|emb|CAL99923.1| AMP-dependent synthetase and ligase [Saccharopolyspora erythraea
NRRL 2338]
Length = 538
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 248/556 (44%), Gaps = 67/556 (12%)
Query: 13 LSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEW 69
L R AA +R++++ T R + ++FV DV LA GLL G+ GD V I + N +EW
Sbjct: 25 LDRTAARFPERDALIEHTTGRRWSYREFVADVDALALGLLGAGITKGDRVGIWSPNRAEW 84
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL-ELQHTA 125
L A A IG I+ +N + E + MLV+ ++SD + E
Sbjct: 85 TLVQ-YATARIGAILVNINPSYRVHELEYVLDQAGIRMLVSARAFKTSDYVSMVEQVRAK 143
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+L V L D + RD A L L + + + I +TSGTTG
Sbjct: 144 CAALERVVFLDGDEWDALFDRDGDPAR-LAAIELSA---------DDPINIQYTSGTTGF 193
Query: 186 PKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIP 244
PKG +SH ++ + Y E D P H G+ +A GA V IP
Sbjct: 194 PKGATLSHHNILNNGFFVGELCRYTEADRVCIPVPFYHCFGMVMGNLACTSRGAAMV-IP 252
Query: 245 K--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
F+ ++AL AV + TSL VP + +A L + S++ + G P E
Sbjct: 253 SEGFDPRTALAAVAEERCTSLYGVPTMF--IAELDHPEFADFDLSSLRTGIMAGSPCPVE 310
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+MK+ + A++ YGMTETS T T D +LE +
Sbjct: 311 VMKQVIDRMGMAEVAICYGMTETSPVST-QTRADDSLER-------------------RV 350
Query: 363 VCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ PH+E+K+ + G + TRG VML YW+Q V W+
Sbjct: 351 STVGRVGPHLEVKIVDPATGLTVPRGEPGELCTRGYSVMLGYWEQADKTAEVIDAARWMH 410
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ +D V + GR + GGEN+YP E+E L HP I+ VVG+ +AR E
Sbjct: 411 TGDLAVMDADDYVGITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVVGVPDARYGE 470
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
++A VRLRE L+ E LR+ C K L +K PR +V + F
Sbjct: 471 ELMAWVRLREGAAE---------------LTVEALREFCTGK-LAHYKIPR-YVHVVEEF 513
Query: 537 PLTSTGKIRRDEVRRE 552
P+T TGK+R+ E+R E
Sbjct: 514 PMTVTGKVRKVEMREE 529
>gi|268558570|ref|XP_002637276.1| Hypothetical protein CBG18959 [Caenorhabditis briggsae]
Length = 624
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 150/563 (26%), Positives = 240/563 (42%), Gaps = 68/563 (12%)
Query: 33 NTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T Q D NLA GLL +GL GD + I N+ + A A G ++ +N +
Sbjct: 95 KTYSQVATDAENLACGLLHLGLNKGDRIGIWGPNTYEWTTTQFATALAGMVLVNINPSYQ 154
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIP--SLRWHVSLGSSSSDF------- 142
+E AI + L+T S Y + +P +L+ G SS +F
Sbjct: 155 SEELRYAIEKVGIRALITPPGFKKSNYYQSIKDILPEVTLKEPGKSGISSRNFSCFQHLI 214
Query: 143 -VNKRDMLTADILKGYSLRSL----------PFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++ D + K + + P+ A+ I +TSGTTG PKG +
Sbjct: 215 MFDEEDKIYPGAWKYTEVMKMGTEEDRHQLSKIERETQPDDALNIQYTSGTTGQPKGATL 274
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG--LSSAMAMLMVGACHVFIPKFES 248
+H ++ + GY E + PL H G + A+ + C P F++
Sbjct: 275 THHNVLNNAFFVGLRAGYSEKKTIICIPNPLYHCFGCVMGVLAALTHLQTCVFPAPSFDA 334
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
+AL+A+ + T+L P + D+ + + T DS++ G P L +
Sbjct: 335 LAALKAIHEEKCTALYGTPTMFIDM--INHPEYTKYNYDSIRSGFIAGAPCPITLCRRLV 392
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+ YG TETS ++FM+ D + P Q ++ G++ +
Sbjct: 393 QDMHMTDMQVCYGTTETSP-VSFMSTRD---DPPEQRIKSVGHIMDHL-----------E 437
Query: 369 APHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
A V+ + C G ++ RG VM YW+ T + W TGDI + D G
Sbjct: 438 AAIVDKRNCIVPRGVKGEVIVRGYSVMRCYWNSEEQTKKEITQDRWYHTGDIAVMHDNGT 497
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+ +VGR I GGEN+YP EVE L +H + + +VG+ + R E+V A VRL ES
Sbjct: 498 ISIVGRSKDMIVRGGENIYPTEVEQFLFKHQAVEDVHIVGVPDERFGEVVCAWVRLHES- 556
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP--FPLTSTGKIRR 546
E + E ++ C+ K + FK PR ++L++K FPLT TGK+++
Sbjct: 557 -------------AEGKTTEEDIKAWCKGK-IAHFKIPR-YILFKKEHQFPLTVTGKVKK 601
Query: 547 DEVR---------REVMSHLKSL 560
E+R ++V+SH L
Sbjct: 602 FEIREMSKIELGLQQVVSHFSEL 624
>gi|377565797|ref|ZP_09795077.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
gi|377527010|dbj|GAB40242.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
Length = 547
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 253/570 (44%), Gaps = 70/570 (12%)
Query: 9 ICQCLSRIA-AVKRN-SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L+R A N ++V R T ++F +VL LA GLL G+++GD V + A N
Sbjct: 24 IGQTLARTTEAYGENLALVDAPSGRTWTYREFRAEVLALAAGLLRHGVQAGDRVGLWAPN 83
Query: 67 SEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQ 122
EW++ A A IG I+ LN + E A+T S V+L + DS Y +
Sbjct: 84 RP---EWVMVQYATAEIGAILVNLNPAYRQNELDYALTQSGTSVVLAAERYKDSDYRGML 140
Query: 123 HTAIPS---LRWHVSLGSSSSDFV---NKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 176
A P+ LR + + D + D L+A + +LRS + + I
Sbjct: 141 DAARPAASELREVILFETPEWDELLTWPSDDELSAVAQRAATLRS---------DDPINI 191
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 235
+TSGTTG PKG ++H+ + ++ Y + D P H G + +A
Sbjct: 192 QYTSGTTGFPKGATLTHANISNNGYLVGELLAYTDADRICIPVPFYHCFGMVMGNLAATS 251
Query: 236 VGACHVFI-PKFESKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKIL 293
GA V P F+ ++AL AV + TSL VP + +A+LA L V+ S++ +
Sbjct: 252 HGAAMVIPSPTFDPEAALRAVVDYRCTSLYGVPTMFIAELALLDHVEPGQYDLSSLRTGI 311
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P +M++ + ++ YGMTETS ++ T D LE
Sbjct: 312 MAGSPCPEHVMRQVVDRMHMGEVSICYGMTETSP-VSCQTRVDDPLEL------------ 358
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PH+E+KV + G TRG VM YW++
Sbjct: 359 -------RVGTVGRVGPHLEIKVIDPITGETLPRGETGEFCTRGYSVMSGYWNEPEKTAE 411
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
+ W+ TGD+ +D + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 412 ALDADGWMHTGDLAVMDPNSYARITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVI 471
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + R E ++A ++LR+ D ++ + + ++ R K PR
Sbjct: 472 GVPDERYGEELMAWIQLRDGV------ADLTADDVREFATGKIARH----------KIPR 515
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+V K FP+T TGK+R+ +R E + L
Sbjct: 516 -YVHVVKEFPMTVTGKVRKVAMRAESVDLL 544
>gi|167628230|ref|YP_001678729.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
gi|167590970|gb|ABZ82718.1| long chain fatty acid acyl-coa ligase [Heliobacterium modesticaldum
Ice1]
Length = 558
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 159/597 (26%), Positives = 262/597 (43%), Gaps = 90/597 (15%)
Query: 1 MANYSQAHICQCLSRIAA---VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSG 57
M+ Q I L + AA K V T N T QF Q +A+GL+ +G++ G
Sbjct: 1 MSELLQITIGDLLDQTAARYPEKEALVYTDDRNLRLTYAQFRQKADEVAKGLMALGVQKG 60
Query: 58 DIVAISALNSEWYLEWI---LAVAFIGGIVAPLNYRW-SFKEASRAITSIRPVMLVTDES 113
+ +A+ A N Y EW+ A +G ++ +N + SF+ S + + D
Sbjct: 61 EHIALWATN---YPEWLYTQFGSAKMGAVLVTVNTNYRSFELEYLLRQSDATTLFLIDGF 117
Query: 114 SDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDM--LTADILKGYSLRSL-PFTHSWAP 170
D+ ++E+ + P L G S ++ R + L I G ++ P +SW
Sbjct: 118 RDNNFVEIINELCPGL------GDSEPGRLSLRRLPKLKNIIFIGRDPQAKHPGMYSWQE 171
Query: 171 ----------------------EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG 208
+ + + +TSGTTG PKGV++SH+ +I +
Sbjct: 172 LIDMGRSVSDAELAERQRSLHFDEVINMQYTSGTTGFPKGVMLSHANIINNANMVADCQK 231
Query: 209 YGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ +D PL H G + S++A + GA V + F +K LEAV++ T L VP
Sbjct: 232 WTHEDRLCFPVPLFHCFGCVMSSLACVCKGATMVPLEYFTAKGVLEAVQRERCTVLYGVP 291
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ +A L S++ + G P E+M++ + ++ AYG TE S
Sbjct: 292 TMF--IAELDHPDFDKYDLSSLRTGIMAGSPCPIEVMRKVIDRMGIGEITIAYGQTEFSP 349
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC-VGKPAPHVELKVCSDGSS---- 382
+T T D +LE + VC VGK PHVE+K+ +
Sbjct: 350 VIT-QTRTDDSLE--------------------RRVCTVGKALPHVEVKIVHPDTGLEIP 388
Query: 383 --HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 440
G + RG M Y++ A + E WL TGD+ ++D+ G + GR I
Sbjct: 389 RGTQGELCARGFGTMKGYYNNPEATEAAIDAEGWLHTGDLATMDEEGYCRITGRAKDMII 448
Query: 441 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 500
GGEN+YP EVE L HP + + VVG+ + + E +AC+ L++ + +E
Sbjct: 449 RGGENIYPREVEEFLFTHPKVKDVQVVGVPDPKYGEEALACIILKDGEEATE-------- 500
Query: 501 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E +R CR K ++ +K P+ +V + FP+T++GKI++ ++R + L
Sbjct: 501 --------EEIRYFCRGK-ISRYKIPK-YVRFVDHFPMTASGKIQKFKLREIFIKEL 547
>gi|333371631|ref|ZP_08463576.1| AMP-binding enzyme family protein [Desmospora sp. 8437]
gi|332975849|gb|EGK12727.1| AMP-binding enzyme family protein [Desmospora sp. 8437]
Length = 568
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 144/568 (25%), Positives = 249/568 (43%), Gaps = 78/568 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R VV N + ++F ++ A+GL+++GL+ GD +AI A N +L A +
Sbjct: 42 REGVVYPEKNLRWSYRRFREECNRAAKGLMKLGLKKGDHLAIWATNHPEWLVTQFATGKM 101
Query: 81 GGIVAPLNYRWSFKEAS-----------------RAITSIRPVMLVTDESSDSWYLELQH 123
G ++ +N + +E + ++ + + + E +DS +L
Sbjct: 102 GAVMITVNTNYRTRELEYLLRQSDTETLILMEEFKGVSYVEMLYEICPELADSEPGQLCS 161
Query: 124 TAIPSLRWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 176
+P L+ + LG SD + D L +L S P+ + +
Sbjct: 162 ERLPKLKNVIFLGEERQPGMFLWSDLLQMGDHLDDTVLAERQA-------SLHPDDVINM 214
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLM 235
+TSGTTG PKGV+++H+ +I + +D P H G + +A +
Sbjct: 215 QYTSGTTGFPKGVMLTHNNIINNGRNIAECMKLTPEDRMCIPVPFFHCFGCVLGILACVN 274
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
G+ V + +F+ + L VE T+L VP + +A L + + S++ +
Sbjct: 275 AGSTMVPVIQFDPLTVLRTVEAERCTALHGVPTMF--IAELNHPQFSSFDLSSLRTGIMA 332
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK N +++ AYG TE+S + DP
Sbjct: 333 GSNCPMEVMKRVMNDMGASEITIAYGQTESSPVIGQTRTDDPI----------------- 375
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 409
+ + VGK PHVE+K+ + G + TRG HVM Y+ A
Sbjct: 376 ---ERRVSTVGKKLPHVEVKIIDPATGEEVETGEQGELCTRGYHVMKGYYRMPEATRQAI 432
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
E WL TGD+ ++D+ G + + GR I GGEN+YP E+E L HP I+ + +VG+
Sbjct: 433 DEEGWLHTGDLATLDEEGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPKILDVQIVGV 492
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E V+A +R +E ES L+ + +R++C K + +K PR
Sbjct: 493 PDEKYGEEVMAFIRPKE----GES------------LTIDEIREYCIGK-IARYKIPRYM 535
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHL 557
L +P+T++GKI++ ++R + + L
Sbjct: 536 HLV-DAYPMTASGKIQKFKLREQAIQVL 562
>gi|324506941|gb|ADY42950.1| Acyl-CoA synthetase family member 2 [Ascaris suum]
Length = 634
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 150/550 (27%), Positives = 236/550 (42%), Gaps = 75/550 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI---LAVAFIGGIVAPLNYR 90
T QQ + D A GL+ +GL GD V + N+ EWI A G I+ +N
Sbjct: 68 TYQQLLHDCEKFATGLIHLGLDRGDRVGMWGPNT---YEWIVCQFGTALAGMIMVNINPS 124
Query: 91 WSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIPSL--RWHVSLGSSSSDFVNKRD 147
+ +E A+ + L+ S Y IP L + SS +F N R
Sbjct: 125 YQSEELKFALEKVGIKALIAPPGFKKSNYYASVSDIIPELVLKPEGRGEMSSHNFPNFRH 184
Query: 148 MLTADILKGYS-----------------LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
+ D K Y ++ P+ V I +TSGTTG PKG
Sbjct: 185 FIIIDDQKAYRGAWKYSEVIKMGTEEDRIKLADIERQVQPDDPVNIQYTSGTTGVPKGAT 244
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTA-PLCHIGG--LSSAMAMLMVGACHVFIPKFE 247
++H ++ + GY E + PL H G + S A + + C P FE
Sbjct: 245 LTHHNVVNNAYFIGRRAGYSEKRTIICVPNPLYHCFGCVMGSLNACIHLQTCVFPAPSFE 304
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+AL+A+ + T++ P + D+ R + S+ G P L +
Sbjct: 305 PLAALQAIHEERCTTVYGTPTMFIDMLNHPRYSEF--DYSSIFSGFVAGAPCPIALCRRL 362
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
L YG TETS +++M++ D + P + ++ G++
Sbjct: 363 VQELGMRDLQVCYGTTETSP-VSYMSVRD---DPPEERIKSVGHIMD------------- 405
Query: 368 PAPHVELKVC-SDGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
H+E + +DG+ G +L RG VM YWD + T + W TGDIG
Sbjct: 406 ---HLESAIVGNDGTVLPRGERGEVLVRGYSVMRCYWDSEDMTKTEITPDRWYHTGDIGV 462
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+ + G V +VGR+ I GGEN+YP EVE L +HP I + +VG+ + R E+V A +
Sbjct: 463 MHENGTVSIVGRKKDMIVRGGENIYPTEVEQYLFRHPMIEDVQIVGVPDERYGEVVCAWI 522
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTS 540
RL E +KN ++ + +R C+ + + FK PR ++L++ K FPLT
Sbjct: 523 RLNE-----------EAKN----ITEQDIRDFCKGR-IAHFKIPR-YILFKGEKDFPLTV 565
Query: 541 TGKIRRDEVR 550
+GK+++ E+R
Sbjct: 566 SGKVKKYEMR 575
>gi|384082654|ref|ZP_09993829.1| malonyl-CoA synthase [gamma proteobacterium HIMB30]
Length = 504
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 246/541 (45%), Gaps = 73/541 (13%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGG 82
++++I G R+ TG + L+ L+++GL GD V++ + LAV G
Sbjct: 20 TLLSIPGGRNLTGSDLDAESAILSSALIDLGLEPGDRVSVQIDKGWMNVVLYLAVLRCGA 79
Query: 83 IVAPLNYRWSFKEASRAITSIRPVM--LVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
+ PLN ++ E +T + V D S ++E +IP L+ ++L +
Sbjct: 80 VYLPLNSAYTNSEIEYFLTDAESKLHVCVADRLS---HIESLKGSIPGLQV-LTLDGETG 135
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
V+ + A + +S + A + I +TSGTTG PKG +I+HS L+ +
Sbjct: 136 TLVDAFETAKA------AGQSFTEVVARASDDLASIIYTSGTTGKPKGAMITHSNLVANA 189
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHC 259
GY DDV LH+ PL H+ GL A+ + LM G + +PKF+ + LEA+
Sbjct: 190 EMLTEAWGYSSDDVLLHSLPLFHVHGLFVALNLALMNGGPVIMLPKFDPERVLEAMPDAT 249
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF---PKAKL 316
V ++ VP L R + G ++ ++G + L+ E ++ F ++
Sbjct: 250 V--MMGVPTYYTRLLADPRFDRDVSGH--MRLFISGS----APLLVETSDEFFSRTGQRI 301
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
+ YGMTET S + P + + G VG P P VE+++
Sbjct: 302 LERYGMTETGMSCS----------------------NPLNGDRRAG-SVGPPLPGVEVRI 338
Query: 377 CS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ DG+ +G + +G HV YW + K + W TGD+ ++ D G V +
Sbjct: 339 IAEDGNPLPHGEIGSLEVKGDHVFKGYW-KLPEKTAAEFKGDWFITGDMATLSDDGYVSI 397
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
VGR I SGG N+YP+E+E VL G+I VVG+ + E +VA +
Sbjct: 398 VGRGKDLIISGGLNIYPKEIEDVLNDQEGVIESAVVGVPHPDFGEGIVAIL-------VG 450
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
ES D ++ L+ CREK L GFK PR ++ P + GK++++ +R
Sbjct: 451 ESQLD-----------TDALQAVCREK-LAGFKIPRRWIRL-DALPRNTMGKVQKNLLRD 497
Query: 552 E 552
+
Sbjct: 498 D 498
>gi|196037314|ref|ZP_03104625.1| AMP-binding protein [Bacillus cereus NVH0597-99]
gi|196031556|gb|EDX70152.1| AMP-binding protein [Bacillus cereus NVH0597-99]
Length = 518
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 241/538 (44%), Gaps = 52/538 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSKKIDI----EINEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPSEDAPAEPN 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+ VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DILP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV------------ 459
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K E + ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 460 ----VKKDETITEAD-LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 511
>gi|74146500|dbj|BAE32109.1| unnamed protein product [Mus musculus]
Length = 615
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 154/584 (26%), Positives = 262/584 (44%), Gaps = 77/584 (13%)
Query: 9 ICQCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ +CL A R ++V + N Q ++V A GLL IGLR GD + + N
Sbjct: 74 VGECLDATAQRFPDREALVILHENIRLNFAQLKEEVDKAASGLLSIGLRKGDRLGMWGPN 133
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWY------ 118
S ++ LA A G I+ +N + E + + + ++ + +Y
Sbjct: 134 SYAWVLIQLATAQAGIILVSVNPAYQSSELEYVLRKVGCKGILFPKQFKTQQYYDILKQV 193
Query: 119 ---LE------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW- 168
LE L+ +P L +S+ + + D + A K +L L + +
Sbjct: 194 CPELEKGQPGALKSERLPDLTTVISVDAPLPGTL-LLDYIVAAGGKEQNLAQLRYNQRFL 252
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSL---AKIAIVGYGEDDVYL-HTAPLCH- 223
+ + I FTSGTTG+PKG +SH ++ S+ ++ + +++ L +PL H
Sbjct: 253 SCYDPINIQFTSGTTGNPKGATLSHHNIVNNSMLIGQRLKMPTKTAEELRLVLPSPLYHC 312
Query: 224 IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
+G + M +M GA + P F K ALEA+ + T L P + D+ +
Sbjct: 313 LGSVGGTMVSMMHGATLLLSSPSFNGKKALEAISREKGTLLYGTPTMFVDILN----QPD 368
Query: 283 WKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
+ D S++ + G P EL++ N +L+ YG TE +S +TFM + TLE
Sbjct: 369 FSSYDFTSIRGGVIAGSPAPPELIRAIINKMNMKELVVVYGTTE-NSPVTFMNFPEDTLE 427
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHV 394
Q G+V G+ PH E ++ + + + G + RG V
Sbjct: 428 ------QKAGSV-------------GRIMPHTEAQIVNVETGELTNLNVPGELYIRGYCV 468
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
M YW + + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 469 MQGYWGEPQKTFETVGQDKWYRTGDIALMDEQGFCKIVGRSKDMIIRGGENIYPAELEDF 528
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L+HP + VVG+ + R+ E + AC+RL+ ++E ++
Sbjct: 529 FLKHPQVQEAQVVGVKDERMGEEICACIRLKSGET----------------TTAEEIKAF 572
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
C+ K ++ FK PR ++++ + +PLT +GKI++ ++R ++ HLK
Sbjct: 573 CKGK-ISHFKIPR-YIVFVEGYPLTISGKIQKFKLREQMEQHLK 614
>gi|167647935|ref|YP_001685598.1| long-chain-fatty-acid--CoA ligase [Caulobacter sp. K31]
gi|167350365|gb|ABZ73100.1| AMP-dependent synthetase and ligase [Caulobacter sp. K31]
Length = 530
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 143/547 (26%), Positives = 236/547 (43%), Gaps = 67/547 (12%)
Query: 19 VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVA 78
V+ + + R + F ++ +A LL GL GD +A NS+ Y E + A
Sbjct: 24 VRPEATALVFEGRATSFADFDRNTDRVAAALLAEGLTKGDRIAYVGKNSDHYFELLFGAA 83
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI--PSLRWHVSLG 136
G ++AP+ +R + +E + + M+ + ++ + P+L
Sbjct: 84 KAGVVLAPIGWRLAPREIAYILGDAEARMVFVGPEMIAHVRDVAELILDQPTLVAMEPND 143
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+F+ RD D P H + + AV + +TSGTTG PKG +++H+ +
Sbjct: 144 YGHPEFMPWRDAAPED--------GKP-AHVTSADIAVQL-YTSGTTGRPKGAMLTHANI 193
Query: 197 I----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSAL 252
+ + + A +A +G DDV L P+ HIGG + L+ GA V +F+ L
Sbjct: 194 LGPRRLAAAADMAWNRWGPDDVSLVAMPVAHIGGTGWGVVGLVNGAKGVVAREFDPTKVL 253
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+ +E+ V+ + VPA + + L R ++ R + IL G +P +L++E F
Sbjct: 254 DFIERDRVSKMFMVPAALQIVVRLPRARQVDYSR--LTHILYGAAPIPLDLLRECLEVF- 310
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG----VCVGKP 368
+ YGMTET+ ++ ++ P H P G G P
Sbjct: 311 GCGFVQQYGMTETTGTVVYL---------------------PPEDHDPAGNPRMRSAGLP 349
Query: 369 APHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
P VEL++ DG VG + R M YW A + WL TGD G I
Sbjct: 350 MPGVELRILGEDGRVLPPGEVGEVAVRSPANMAGYWKLPEATADTIDSDSWLRTGDAGYI 409
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G +++ R I SGGEN+YP EVE+ + HP + + V+G+ + E V A V
Sbjct: 410 DADGYLFIHDRVKDMIISGGENIYPAEVESAVYGHPHVAEVAVIGVPDDTWGEAVKAVVA 469
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+ ++ S+ + + GFKAP+ + + + P ++GK
Sbjct: 470 LKPGAPRDPADIIAFSRTR-----------------IAGFKAPKT-IDFVEALPRNASGK 511
Query: 544 IRRDEVR 550
I R E+R
Sbjct: 512 ILRRELR 518
>gi|384044693|ref|YP_005492710.1| AMP-dependent synthetase and ligase [Bacillus megaterium WSH-002]
gi|345442384|gb|AEN87401.1| AMP-dependent synthetase and ligase [Bacillus megaterium WSH-002]
Length = 563
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 154/585 (26%), Positives = 253/585 (43%), Gaps = 71/585 (12%)
Query: 3 NYSQAHICQCLSR-IAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVA 61
+Y Q ++ Q + + S + G + T Q QD L L+ L+E+GL+ GD VA
Sbjct: 21 HYEQKNLAQLFEEAVQKDPKKSAIYFLGKKM-TFSQLHQDSLKLSSYLIELGLKRGDRVA 79
Query: 62 ISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWY--- 118
I N + AV GG+V N ++ +E + M++ + D Y
Sbjct: 80 IMLPNCPQAVISFYAVLLAGGVVVQTNPLYTERELEYQLNDSEATMII---ALDLLYPRV 136
Query: 119 ------LELQHTAIPSLRWHVSLGSS-SSDFVNKRDML---------TADILKGYSLRSL 162
+++H I S++ ++ + F+ ++ T + K S
Sbjct: 137 VKMKALTKIKHVVITSIQDYLPFPKNIMYPFIQRKQQKISVNVSHTETTHLFKRIINESS 196
Query: 163 PFT---HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYL 216
P + E I+ +T GTTG PKGV+++H L+ + + +GE+ V L
Sbjct: 197 PAVCNAEGISDEDIAILQYTGGTTGFPKGVMLTHKNLVANATMCSHWLYRCRHGEEKV-L 255
Query: 217 HTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
P H+ GL++ + + ++ V +PKF++K+ L+ + + T P I L
Sbjct: 256 GIIPFFHVYGLTTVLVLSVLQNYEMVLLPKFDAKTTLKTIHKQQPTLFPGAPTIYIALLN 315
Query: 276 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
+ K S+ ++G LP E+ +E KL+ YG+TETS L+
Sbjct: 316 HPDLAKY--NLSSIDSCMSGSAPLPVEV-QEQFEKLTGGKLVEGYGLTETSPVTHANFLW 372
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVM 395
+ ++P + G P++ + GK A S VG I +G VM
Sbjct: 373 EE------RIPGSIGVPWPDTDAKILSFETGKEA----------AVSEVGEIAVKGPQVM 416
Query: 396 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
YW Q +V + WL TGD+G +DD G ++V R+ I +GG N+YP EVE VL
Sbjct: 417 KGYWKQPEETEAVMR-DGWLLTGDVGYMDDKGYFYVVDRKKDIIIAGGYNIYPREVEEVL 475
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
+H I VVVG+ + E V A + L+ + +E ++ S+
Sbjct: 476 YEHEKIQEAVVVGVPDPYRGETVKAYIVLKNGVRCTEEELNEFSR--------------- 520
Query: 516 REKNLTGFKAPRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKS 559
K L +K PRL+ +R P T+ GKI RR + E H K+
Sbjct: 521 --KYLAAYKVPRLYE-FRNELPKTAVGKILRRALIEEENEKHKKA 562
>gi|384220488|ref|YP_005611654.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA 6]
gi|354959387|dbj|BAL12066.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA 6]
Length = 526
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 243/558 (43%), Gaps = 65/558 (11%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A++ + A + N+ R + +F +A L+ +G+R GD +A N
Sbjct: 8 ANLADMVRERATSRGNATAYEFEGRVTSFAEFNARTSKVANALIAMGVRRGDRIAYLGKN 67
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTA 125
S+ Y E ++ G ++AP+N+R + E + + + PV+ V E +
Sbjct: 68 SDLYFELLMGAMKAGVVMAPVNWRLAGPEVAFIVADCKAPVLFVGPEFIAQ--VRQIKDQ 125
Query: 126 IPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+P +R ++ + DF RD + D + +P I +TSGT
Sbjct: 126 LPGVRTVITTEGGAPEWQDFTAWRDAQSGDDPR------VPIDT----RDIAIQLYTSGT 175
Query: 183 TGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVG 237
TG PKG ++SH+ + VQ+ K + DDV L P+ HIGG + L G
Sbjct: 176 TGKPKGAMLSHANFLNLVQTGNAEDKPEWNRWSTDDVSLVAMPIFHIGGSGWGVMGLYHG 235
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
A V +F+ L+ EQ +T L VPA M + R + R +K +L G
Sbjct: 236 ARGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRARTVDFSR--LKYMLYGAS 293
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 294 PIPAALLKECIEIF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA--------- 342
Query: 358 HQPQGVCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
GK P VE+ + +DG VG I TR M YW+ A S +
Sbjct: 343 --------GKALPGVEIAILDADGKPLPPREVGEIATRSGSNMAGYWNLPEATASTLRND 394
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WL TGD G +D+ G +++ R I SGGEN+YP EVE+ L HP + V+G+ +
Sbjct: 395 GWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENIYPAEVESALCDHPDVAEAAVIGVPDD 454
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A V ++ Q + ++ + RE+ + GFK P+ V +
Sbjct: 455 KWGEAVKAVVVMKPGKQATATD----------------IINFTRER-IAGFKTPKS-VEF 496
Query: 533 RKPFPLTSTGKIRRDEVR 550
P +GKI R ++R
Sbjct: 497 LPALPRNPSGKILRRQLR 514
>gi|321477421|gb|EFX88380.1| hypothetical protein DAPPUDRAFT_96055 [Daphnia pulex]
Length = 965
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 241/550 (43%), Gaps = 94/550 (17%)
Query: 46 ARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITS 102
A GL +GL+ GD + I NS EWIL A A IG I+ +N + +E A+
Sbjct: 456 AAGLRSLGLKRGDRIGIWGPNS---YEWILTQWAAARIGLILVNINPAYQTEELRYALEK 512
Query: 103 IRPVMLV--------------------------TDESSDSWYLELQHTAIPSLRWHVSLG 136
+ LV T++ D+ L++ + IP+L + +
Sbjct: 513 VGVKALVVAKHFRNTNLMDILSQLVPQLDPNRNTNQLEDTKKLKVSSSLIPTLERVIVM- 571
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI----ICFTSGTTGSPKGVVIS 192
S + N + D++ + + H+ E + I FTSGTTG+PKG +S
Sbjct: 572 --SDEHQNNGALRWQDLMDLATSDLVAEIHNLQREIEIDEPANIQFTSGTTGNPKGATLS 629
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHT----APLCHIGG-LSSAMAMLMVGACHVFI-PKF 246
H ++ + + Y D H PL H G + + GA +F P F
Sbjct: 630 HKNIVNNAYLVGLRLNY---DKMAHKICVPVPLYHCAGCVVGVLTAASHGATCIFPSPVF 686
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
++ A++AV T+L P + D+ L +K+ S+ + G P E+ K
Sbjct: 687 SAREAVKAVHHERCTALYGTPTMYVDILNLPDLKQY--DLKSLSTGIMAGAPCPEEIAKG 744
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
N YGMTE S + TFMTL P+ + VG
Sbjct: 745 TVNDLNMKDFAILYGMTECSPT-TFMTL-------------------PSDSFDLRCSTVG 784
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
P HVE+K+ ++ + G I TRG + ML YW+Q + + + W+ +GD+
Sbjct: 785 YPCEHVEVKIVDPQTNEIVPVNTPGEICTRGYNTMLGYWNQPDKTSEIISEDGWIRSGDL 844
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G +++ G +VGR I GGENVYP E+E +L HP + VVG+ + RL E + A
Sbjct: 845 GVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSVQEAQVVGVPDERLGEEICA 904
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+R + ++N D S L++ C EK + FK P+ + +++ FPLT
Sbjct: 905 WIRCK-----PQTNSD-----------SLELKRFCSEK-MAYFKVPK-YWMFKDKFPLTV 946
Query: 541 TGKIRRDEVR 550
TGK+++ E+R
Sbjct: 947 TGKVKKFEIR 956
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 160/353 (45%), Gaps = 31/353 (8%)
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT-APLCHIGGLSS 229
+ A I FTSGTTGSPKG +SH+ ++ S VGY + + + PL H G
Sbjct: 22 DDAANIQFTSGTTGSPKGATLSHNNIVNNSYNVGLRVGYHQKEHKICVPVPLYHCFGCGL 81
Query: 230 A-MAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD 287
A +A GA VF P F ++ A++A+ TSL P + D+ L +K+
Sbjct: 82 AVLAAASFGATCVFPSPVFSAREAVKAIHHERCTSLYGTPTMFVDILNLPDLKQY--DLK 139
Query: 288 SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 347
S+ + G P E+ K YGMTE S + TFMTL
Sbjct: 140 SLSTGIMAGAPCPEEIAKGTVKDLNMKDFAILYGMTECSPA-TFMTL------------- 185
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQ 401
PN + +G P H+E+K+ ++ + G I TRG + ML YW+Q
Sbjct: 186 ------PNDSFDLRCSTIGYPGEHIEVKIVDPQTNDIVPVNTPGEICTRGYNTMLGYWNQ 239
Query: 402 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
+ + + W+ +GD+G +++ G +VGR I GGENVYP E+E +L HP +
Sbjct: 240 PDKTSEIISEDGWIRSGDLGVLNEDGYGKIVGRIKDMIIRGGENVYPREIEEILHTHPSV 299
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
VVG+ + RL E + A +R + + K++ L L QH
Sbjct: 300 QEAQVVGVPDERLGEEICAWIRCKPQTNLDSLELKRFCLEKQISLLFAQLCQH 352
>gi|406596826|ref|YP_006747956.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406598074|ref|YP_006749204.1| AMP-binding protein [Alteromonas macleodii ATCC 27126]
gi|406374147|gb|AFS37402.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
gi|406375395|gb|AFS38650.1| AMP-binding domain protein [Alteromonas macleodii ATCC 27126]
Length = 579
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 240/554 (43%), Gaps = 70/554 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T QQ+ +V +A GLL G+ GD V I S N EW + +A A IG I+ LN +
Sbjct: 59 TYQQYWYEVERVACGLLANGVEPGDRVGIWSPNNIEWSIVQ-MATARIGAIMVCLNPAYR 117
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE--------------------LQHTAIPSLRW 131
E + AI ++ LV +S S Y+ L + +PSL++
Sbjct: 118 PDELAFAINNVSVKYLVMAQSFKQSNYVAMLKELAPEIDSQDKNTPRRPLTLSKLPSLKY 177
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++G + + L + + + + + + I FTSGTTG+PKG +
Sbjct: 178 VYTIGDKPVEGLQAFSALQIEPTEALKSQLEAVESNLSANDNINIQFTSGTTGNPKGATL 237
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESK 249
+H ++ L + + D PL H G+ + L GAC VF + F+ +
Sbjct: 238 THRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPGESFDPE 297
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L VE+ T L VP + L K +++ + G P ELM++ +
Sbjct: 298 TTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTLRTGVMAGSTCPEELMRKVHS 355
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
F +++ YG TE S + +T D E Q VG+
Sbjct: 356 EFHMTEVVIGYGQTE-CSPINHITDIDSPFEK-------------------QVKTVGRAM 395
Query: 370 PHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
PH E+K+ + V G I RG VM YW + + E WL +GD+G +D
Sbjct: 396 PHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEVKTKATIDDEGWLHSGDLGEMD 455
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E VL QH + V GI + + E V ++
Sbjct: 456 EEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNKYGEQVCLWIKE 515
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+E+ E DQ +R + + K L FK P+ ++ K +P+T TGK+
Sbjct: 516 KENRHIDE---DQ-------------IRDYLKSK-LAYFKVPK-YISVVKEYPMTVTGKL 557
Query: 545 RRDEVRREVMSHLK 558
++ ++R ++ LK
Sbjct: 558 QKFKMREYMIETLK 571
>gi|384214527|ref|YP_005605691.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
gi|354953424|dbj|BAL06103.1| hypothetical protein BJ6T_08100 [Bradyrhizobium japonicum USDA 6]
Length = 564
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 247/564 (43%), Gaps = 70/564 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAF 79
R ++V+ + T +F + V LA G L +GL G V I +LN EW L A A
Sbjct: 36 REALVSPSHGVRWTWTEFAERVDALAAGFLALGLERGQRVGIWSLNRPEWTLTQ-FAAAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIPSLRWHVSLGSS 138
G I+ +N + E A+ + +VT + S Y+E+ +T +P L +
Sbjct: 95 AGLILVTINPAYRLSELEFALRKVGCKAIVTATAFKTSHYIEMLNTLLPELAGAEPGKLT 154
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGA------------------VIICFTS 180
++ + R + I + ++PF GA V I FTS
Sbjct: 155 AARLPDLR--MVIQIGGPAAPGTIPFEEVARMGGAQHREQLIALGAALQFDDPVNIQFTS 212
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGAC 239
GTTGSPKGV ++H ++ + E D PL H G+ +A + +G
Sbjct: 213 GTTGSPKGVTLTHHNILNNGYFTGRAMHLTEQDRICIPVPLYHCFGMVMGNLASVTLGTT 272
Query: 240 HVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
V+ + F+ + L AVEQ T+L VP + +A L + S++ + G
Sbjct: 273 MVYPGEGFDPLATLRAVEQEKCTALYGVPTMF--IAELDHPEFPKFDLTSLRTGIMAGAP 330
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
P E+MK ++ AYGMTETS P +F + T + +
Sbjct: 331 CPIEVMKRVNTEMNMREVTIAYGMTETS-------------------PVSFQSATDDPLE 371
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ + VG+ PHVE+KV V G + TRG +ML YW++ V
Sbjct: 372 R-RVSTVGRIHPHVEVKVVDLEGRIVKRGERGELCTRGYSIMLGYWEEKEKTADVLDANG 430
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I + + G+A+ R
Sbjct: 431 WMHTGDLATIDDEGYCNIVGRIKDLVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTR 490
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E + A +R+R L++E +R C + + K PR +V +
Sbjct: 491 YGEELCAWIRVRPGET----------------LTAEEVRAFC-DGQIAHNKIPR-YVEFV 532
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
FP+T TGKI++ +R V L
Sbjct: 533 DEFPMTVTGKIQKFVMRDAVEQRL 556
>gi|154150313|ref|YP_001403931.1| AMP-dependent synthetase/ligase [Methanoregula boonei 6A8]
gi|153998865|gb|ABS55288.1| AMP-dependent synthetase and ligase [Methanoregula boonei 6A8]
Length = 566
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 152/586 (25%), Positives = 257/586 (43%), Gaps = 91/586 (15%)
Query: 11 QCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
+ + IAA + ++V++ N T ++F+ V +AR L+ +G+ GD V I A+N
Sbjct: 22 EMIDHIAARYPENEAIVSVHQNIRWTYKEFLSQVNLVARALMGLGVDKGDRVGIWAMN-- 79
Query: 69 WYLEWI---LAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHT 124
+ EWI A A IG I+ +N + E A+ S +++ S Y+ + +
Sbjct: 80 -HAEWIVIQFATAKIGAIMVNINPAYRTYELEYALKQSEIQTLILQGRFKTSDYVGMFYE 138
Query: 125 AIPS----------------LRWHVSLGS-------SSSDFVNKRDMLTADIL--KGYSL 159
A P L+ V +G+ + +F+ K D +T D L +G +L
Sbjct: 139 ACPEAYEQKPGRISSEKFPFLKNVVFMGNIPYNGTFTWDEFIKKADDITMDELVERGEAL 198
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 219
+ + I +TSGTTG PKGVV++H ++ +G+ E D
Sbjct: 199 TF---------DDPINIQYTSGTTGFPKGVVLTHHGVLNNGYIIGEGMGFTEKDRLCIPV 249
Query: 220 PLCHIGGLS-SAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 277
P H G+ S MA G V P F+++ L+ +E+ T++ VP + +A L
Sbjct: 250 PFYHCFGMVLSNMASATHGTTMVLPCPTFDAEEVLKTIEKERCTAVHGVPTMF--IAELS 307
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 337
+ S++ + G P E+MK+ ++ YG TETS +T T DP
Sbjct: 308 HPNFSKYNLSSLRTGIMAGSPCPIEVMKQVNTKMNMRDIVIVYGQTETSPGVTMTTTKDP 367
Query: 338 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRG 391
+ + +G+ PH ELK+ + VG I RG
Sbjct: 368 L--------------------ERRVTTIGRAFPHTELKIIDPKTGKIVPMGEVGEICARG 407
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
VM Y++ A + + W TGD+ ++D+ G +VGR + GGEN+YP E+
Sbjct: 408 YCVMKCYYNNPAATHATLDKDHWNHTGDLATMDEEGYFKVVGRLKDMVIRGGENIYPREI 467
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E L H + + VVG+ + + E + A V+++ +E +
Sbjct: 468 EEFLHHHEKVSDVYVVGVPDIKYGEELCAWVKVKAGQALTEDE----------------V 511
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
++ C+ K + FK PR +VL+ FP++ TGKI++ +R E + L
Sbjct: 512 KEFCKGK-IAHFKIPR-YVLFVDDFPMSVTGKIQKFVMREESIKRL 555
>gi|410980755|ref|XP_003996741.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Felis catus]
Length = 615
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 264/582 (45%), Gaps = 75/582 (12%)
Query: 9 ICQCLSRIA--AVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ QCL IA R ++V N T Q ++V A GLL IGLR GD + + N
Sbjct: 74 VGQCLEAIAQRVPDREALVVPQENIRLTFAQLKEEVDKAASGLLSIGLRKGDRLGMWGPN 133
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWY------ 118
S ++ LA A G I+ +N + E A+ + + V + +Y
Sbjct: 134 SYAWVLMQLATAQAGIILVSVNPAYQATELEYALKKVGCKAVTFPKQFKTQQYYNILKQI 193
Query: 119 ---LE------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW- 168
LE L+ +P L +S+ + +++ A + + L L +T +
Sbjct: 194 CPELEKAQPGALKSQRLPDLTTVISVDDPLPGTLLLDEVVAAGSTEQH-LARLRYTQQFL 252
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG--------YGEDDVYLHTAP 220
+ + I FTSGTTGSPKG +SH ++ S ++G ED + +P
Sbjct: 253 SCHDPINIQFTSGTTGSPKGATLSHYNIVNNS----NMIGDRLRLHLKTSEDLRIILPSP 308
Query: 221 LCH-IGGLSSAMAMLMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 278
L H +G + M LM GA + P F+ K ALEA+ + T L P + D+
Sbjct: 309 LYHCLGSVGGTMVSLMYGATLILPCPTFDGKKALEAISKERGTILYGTPTMFVDILN--- 365
Query: 279 VKKTWKGRDSVKKILNG---GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
+ + D + + G G P EL++ + +L+ AYG TE +S +TFM
Sbjct: 366 -QPDFSSYD-ISSMCGGVIAGSPAPPELIRAIIDKLNMKELVVAYGTTE-NSPVTFMNFA 422
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVM 395
+ T+E Q ++ G + P++ Q + G A EL G + RG VM
Sbjct: 423 EDTVE---QKAESVGRIMPHTEAQIVDMKTGTLA---ELNTS-------GELCIRGYCVM 469
Query: 396 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
L YW + + W TGDI +D+ G +VGR I GGEN+YP E+E
Sbjct: 470 LGYWGEPQKTEEAIGQDKWYHTGDIAVMDNQGFCKIVGRSKDMIIRGGENIYPAELEDFF 529
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
HP + + VVG+ + R+ E + AC+RL++ + ++E ++ C
Sbjct: 530 HTHPQVQEVQVVGVKDDRMGEEICACIRLKKGEK----------------TTAEEIKAFC 573
Query: 516 REKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ K ++ FK PR +V++ +PLT +GKI++ ++R+++ HL
Sbjct: 574 KGK-ISHFKIPR-YVVFVTNYPLTVSGKIQKFKLRQQMEQHL 613
>gi|228959259|ref|ZP_04120955.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228800457|gb|EEM47378.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 522
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 251/535 (46%), Gaps = 60/535 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ D +A+S N + A A +G I+ P N +
Sbjct: 36 RRITYKQLKYEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 95
Query: 91 WSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
+ E + S P +L+ + E ++ E + ++ +++ S ++ + +++
Sbjct: 96 YKSYEIEYILESSAPKLLIASGEFEKNFGFE---KVVNKVQKVITVRFSQENYCSYEELI 152
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VG 208
+ + + H + I +TSGTTG+PKGV+++H A +VQS I +
Sbjct: 153 RTEKM------DIEPVHINVNDDLFCILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELH 205
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ DV++ +APL HI G++ + + + +G + KF + L+ +EQ VT VP
Sbjct: 206 CTQKDVFIISAPLFHIFGMAINMLCAVAMGGRFILQEKFHPRETLQLIEQEKVTIQKGVP 265
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L K S++ L G +P++ + E L ++G+TET S
Sbjct: 266 TMFIKELELEDFDKY--NLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETVS 322
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-----S 382
M+ YD T E N+T +GK P V LK+ +
Sbjct: 323 --ITMSSYDDTKE----------NITET---------LGKAIPGVTLKIVDENRVALPPG 361
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I +G VM Y++ V E W +GD+G++D G + VGR+ I G
Sbjct: 362 EVGEIAVKGFGVMKGYYNMPEQTNQVLDNEEWYYSGDLGTLDSQGYLRFVGRKKEMIIRG 421
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
G NVYP+E+EAV+++HP +I V+G+ + L E+ A +RL KN
Sbjct: 422 GLNVYPQEIEAVIMKHPKVIEAAVIGLPDKVLGEVACAVIRL---------------KNG 466
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E+ E+ + + +E+ + +K P V++ FP+T++GKI++ +++ +V S++
Sbjct: 467 EISTEEEI-KIYLKER-MAIYKLPEK-VIFTDEFPVTASGKIQKLKLKEQVSSNI 518
>gi|149182632|ref|ZP_01861101.1| putative long-chain fatty-acid-CoA ligase [Bacillus sp. SG-1]
gi|148849655|gb|EDL63836.1| putative long-chain fatty-acid-CoA ligase [Bacillus sp. SG-1]
Length = 498
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 229/521 (43%), Gaps = 80/521 (15%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA LE G++ GD +A+ A N Y +++ A IG I PLN+R S E +
Sbjct: 42 LAGLFLEQGVKKGDRIALFAENHVSYFDFMFACLKIGAIFVPLNWRLSTDELQFVVRDAA 101
Query: 105 PVMLVTDESSDSWYLELQHT--AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL 162
P ++ S ELQ I H G ++S K D+ +D L
Sbjct: 102 PAIMGVQTSFIQQASELQEDFYLIEIDSNHYLEGIATSKITAKLDLEESDPLA------- 154
Query: 163 PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLC 222
+ +T GTTG PKG V+SH +++ ++ I + D L + P+
Sbjct: 155 -------------MIYTGGTTGHPKGAVLSHRSIMWNAVNTIVSWNLTDRDTTLTSIPMF 201
Query: 223 HIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKK 281
H GGL++ ++ +L+ G V P F A++ + + + ++ VP M + T + K
Sbjct: 202 HTGGLNALSIPILVAGGTVVLSPGFHPDQAVKDLIDYKCSIVLFVPT-MYHMLTGTKAFK 260
Query: 282 TWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 341
K D +K L+GG P + EA NS A YG+TE
Sbjct: 261 KAKFPD-MKVFLSGGAPCPLGIY-EAFNSKGLA-FKEGYGLTEAG--------------- 302
Query: 342 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVML 396
P F + P QG VGKP E+KV ++ G+ VG + RG+H+
Sbjct: 303 ----PNNF-YIDPKEAVVRQG-SVGKPMLFNEVKVVNEQGLEAGADEVGELYLRGSHLFE 356
Query: 397 RYWDQFLAKPSVSTGEVW----LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 452
YW K T E W TGD+ D+ G ++VGR+ I +GGENVYP E+E
Sbjct: 357 YYW-----KKDDETREAWQGGWFRTGDLAKKDEDGYYYIVGRKKDMIITGGENVYPSEIE 411
Query: 453 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 512
+ H + + V+GI + + E VVA V + S LS E L+
Sbjct: 412 YWIESHDTVDEVAVIGIPDEKWGEKVVAFVTAKGS----------------TGLSPEELQ 455
Query: 513 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
++C+ K LT +K P+ F + + P T GKI ++E+R +
Sbjct: 456 EYCKRK-LTKYKIPKCFYIVDQ-LPKTHVGKINKNELRNRL 494
>gi|429746669|ref|ZP_19280005.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429165564|gb|EKY07608.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 542
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 239/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ + T +F V +A+GL+ +G++ GD V I + N EW L A
Sbjct: 35 KEALISVHQDYRVTYAEFYAQVTAVAKGLIALGVKQGDRVGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + + S Y ++ A +LR V
Sbjct: 92 AKIGAIMVNINPAYRTSELIYVINQSGISYIFAAPQFKSSNYKKMIDDAREFTETLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G S F+ + +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGESWQHFLAHGEKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + Y E D P H G+ V + IP F++
Sbjct: 205 HNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLACTVHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T + P + Q VG H
Sbjct: 323 NMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSVGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 363 LEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGDLAMMDE 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVMAWIKPK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E + L+ E L C+ + + +K PR W+ + FP+T +GK
Sbjct: 483 EG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|407689016|ref|YP_006804189.1| AMP-binding protein [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407292396|gb|AFT96708.1| AMP-binding domain protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 579
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 240/554 (43%), Gaps = 70/554 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T QQ+ +V +A GLL G+ GD V I S N EW + +A A IG I+ LN +
Sbjct: 59 TYQQYWYEVERVACGLLANGVEPGDRVGIWSPNNIEWSIVQ-MATARIGAIMVCLNPAYR 117
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE--------------------LQHTAIPSLRW 131
E + AI ++ LV +S S Y+ L +PSL++
Sbjct: 118 PDELAFAINNVSVKYLVMAQSFKQSNYVAMLKELAPEIDSQDKNTPKRPLTLAKLPSLKY 177
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++G + + L + + + + + + + I FTSGTTG+PKG +
Sbjct: 178 VYTIGDKPVEGLQAFSALQIEPTEALKSQLEAVESNLSADDNINIQFTSGTTGNPKGATL 237
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESK 249
+H ++ L + + D PL H G+ + L GAC VF + F+ +
Sbjct: 238 THRNILNNGLLVSQAMRFTHKDKLCIPVPLYHCFGMVLGNLVCLASGACAVFPGESFDPE 297
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L VE+ T L VP + L K +++ + G P ELM++ +
Sbjct: 298 TTLRTVEEEKCTGLHGVPTMFIAELELSNFKSF--DLSTLRTGVMAGSTCPEELMRKVHS 355
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
F +++ YG TE S + +T D E Q VG+
Sbjct: 356 EFYMTEVVIGYGQTE-CSPINHITDIDSPFEK-------------------QVKTVGRAM 395
Query: 370 PHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
PH E+K+ + V G I RG VM YW + + E WL +GD+G +D
Sbjct: 396 PHTEVKIIDPQGNTVPIGEPGEICARGYCVMKGYWGDEIKTKATIDDEGWLHSGDLGEMD 455
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E VL QH + V GI + + E V ++
Sbjct: 456 EEGYVTIVGRIKDMIIRGGENIYPREIEEVLYQHADVSDAAVFGIPDNKYGEQVCLWIKA 515
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+E+ E DQ +R + + K L FK P+ ++ K +P+T TGK+
Sbjct: 516 KENRHIDE---DQ-------------IRDYLKSK-LAYFKVPK-YISVVKEYPMTVTGKL 557
Query: 545 RRDEVRREVMSHLK 558
++ ++R ++ LK
Sbjct: 558 QKFKMRECMIETLK 571
>gi|407784323|ref|ZP_11131494.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
gi|407197205|gb|EKE67280.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
Length = 502
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 214/508 (42%), Gaps = 64/508 (12%)
Query: 53 GLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE 112
G+ GD+VA+ NS ++E A +++GG+ P+N+R + E + + ++ D+
Sbjct: 48 GIGEGDVVAVFMKNSSSFIEIAFATSYLGGVFLPVNFRLAADEVAYITGNAEAKLVFADK 107
Query: 113 SSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 172
+L HT + D ++D+ L G + ++P P+
Sbjct: 108 EFQPVVRDLPHTVL-------------LDAAAQKDIRA---LTG-APAAIPPQRPRQPDD 150
Query: 173 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAM 231
+ +TSGTT PKGV+ ++ +++ + +G +D L PL H+G
Sbjct: 151 LFRLMYTSGTTDRPKGVMHTYDNYYWKNMEQAIFLGLTREDRILTVGPLYHVGAFDLPGT 210
Query: 232 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
A+L VG + F+ L +E+ +T P ++ TL +K ++
Sbjct: 211 AVLWVGGTMCILRDFDPAEMLATIEREKLTCAWMAPVMLGRALTLDGRQKY--DLTFLRW 268
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+ GG P ++ T FP + I YG+TET S T M G G+
Sbjct: 269 TIGGGEKTPESRIRAFTELFPNGRYIDGYGLTETCSGDTLMEA--------GMEIAKIGS 320
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKP 406
G+P H E+++ D V G I RG V YW
Sbjct: 321 T-------------GRPTAHCEIRITDDDGREVPAGTHGEICVRGPKVTKGYWKDPEKTE 367
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ E W +GD+G +D G +++ R+ I SGGEN+ EVE V+ Q P + + V
Sbjct: 368 ASFYPEGWFRSGDVGYVDADGFLYITDRKKDMILSGGENIASSEVERVIYQMPQVSEVAV 427
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+G+ + R E VA + + L+ E +R HCR+ +L GFK P
Sbjct: 428 IGVPDERWGEKPVAIIVPKPGQT----------------LAYETMRDHCRQ-HLAGFKVP 470
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVM 554
+ L R+ P +GKI + +R E +
Sbjct: 471 KELHL-REALPRNPSGKILKRVLRDEFL 497
>gi|226365581|ref|YP_002783364.1| long-chain-fatty-acid--CoA ligase [Rhodococcus opacus B4]
gi|226244071|dbj|BAH54419.1| putative fatty-acid--CoA ligase [Rhodococcus opacus B4]
Length = 530
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 234/520 (45%), Gaps = 67/520 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA L G+ GD V + LN + E +LA+ +G I P+N+R + E + I
Sbjct: 55 LAAALSRRGVNFGDRVLLLTLNRTEFFEAVLAINALGAIAVPVNFRLTPPEVA-FIARDS 113
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
V E + + + +P L + +G+ + V + L A+ ++ LP
Sbjct: 114 GARAVFTEPALAPLVSAVRQDVPDLGLAIVMGAETEADVLGYEDLVAEDGPAFAPVDLP- 172
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE-DDVYLHTAPLCH 223
+ +I +TSGTTG+PKG V+SHS ++ QS+ I + Y DDV +P+ H
Sbjct: 173 -----EDTPSLILYTSGTTGTPKGAVLSHSNMVGQSITCIRAMRYDRGDDVGFLASPVFH 227
Query: 224 IGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATLI 277
+ L S MLM+GA V P F+ L+ E+ +T++ VP A+ AD
Sbjct: 228 VAALGSVAPMLMLGATTVIHPLKAFDPTEMLDVWERERITTVFLVPVQWQAVCAD----- 282
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
T GRD ++++ G S+ +++ +FPKA +++ +G TE S +T + D
Sbjct: 283 ---PTAAGRDLALRVISWGAAPASDTVLRAMAATFPKALVVAVFGQTEMSP-ITCVLDGD 338
Query: 337 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRG 391
+ G VGKP P ++ ++ D VG I+ RG
Sbjct: 339 DAIRKLG--------------------SVGKPVPTIQTRIVDDEMNDVAPGTVGEIVYRG 378
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
+M YW A G W +GD+ D+ G V++V R+ I SGGEN+Y EV
Sbjct: 379 PTMMQGYWQNPAATADAFAGG-WFHSGDLVRQDEEGFVYVVDRKKDMIISGGENIYCAEV 437
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL HP I VVG + + TE+ VA V L + L+ + L
Sbjct: 438 ENVLFGHPRIREAAVVGRPHPKWTEVPVAIVAL---------------DDDGDDLTVDEL 482
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K L +K P+ V+ P ++GK+ + E+R+
Sbjct: 483 AAWLDDK-LARYKHPKDIVV-VDALPRNASGKVVKGELRK 520
>gi|323358575|ref|YP_004224971.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Microbacterium testaceum StLB037]
gi|323274946|dbj|BAJ75091.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Microbacterium testaceum StLB037]
Length = 512
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 151/549 (27%), Positives = 236/549 (42%), Gaps = 78/549 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+ V N+ T +Q + L+E G+ +GD VA NS +L + IG
Sbjct: 20 KTAVVFGENQRLTYRQLADRAEAASAVLVEEGIGAGDTVAFLGENSPDFLVTLFGAVRIG 79
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH-TAIPS--LRWHVSLGSS 138
+ P+N R + E + ++ R +LV D S D + A P LR S
Sbjct: 80 AVFVPVNTRLAGPEIAHVLSDSRARVLVHDASFDDRLDTVDAGLAHPPHRLRTGASGRHG 139
Query: 139 SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
F + D T P P+ + +TSGTTG PKG V++H L
Sbjct: 140 EPGFDRRMDAAT----------PAPALVIAEPDAPAAVVYTSGTTGRPKGAVLTHENLTA 189
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQ 257
++ + DDV L +PL H+ L A+ +++ G V FE+ AL+ +EQ
Sbjct: 190 VAVNTVIDYDVVSDDVALMISPLFHVASLGMGALPVVLKGGTLVLEKGFEAGRALDLIEQ 249
Query: 258 HCVTSLITVPA---IMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMK---EATN 309
H VT + VP +MAD +W D S+ + GG +P +++ E
Sbjct: 250 HRVTMISGVPTTFQLMAD-------HPSWASTDISSLHTLTCGGSAVPDRILRAWEERGL 302
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
SF + YGMTETS T ++ P+ QG VG P
Sbjct: 303 SFSQG-----YGMTETSPGAT--------------------SLAPHMTRAKQG-SVGLPH 336
Query: 370 PHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
E++V D + VG I G +V + Y A + T + W +GD+G +D
Sbjct: 337 FFTEVRVVDDERRPVPAGTVGEIHVSGPNVFVGYLGLDDATRAAKTDDGWFRSGDLGYLD 396
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ GR I SGGEN+YP EVEA++ PG+ G+ V+GI + R E+ +A V +
Sbjct: 397 ADGYLYICGRSKDMIISGGENIYPAEVEALISDIPGVTGVAVIGIPDDRWGEVPLAVVTV 456
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
E + + + V+R H + + +K P+ V+ P T++GKI
Sbjct: 457 AEGAE----------------VDTAVVRAHL-DGQVARYKLPKEVVVI-DALPRTASGKI 498
Query: 545 RRDEVRREV 553
+ E+R +
Sbjct: 499 VKAELRERL 507
>gi|402569814|ref|YP_006619158.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
gi|402251011|gb|AFQ51464.1| AMP-binding domain-containing protein [Burkholderia cepacia GG4]
Length = 572
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 248/550 (45%), Gaps = 76/550 (13%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA---VAFIGGIVAPLNYRWS 92
+ F ++ LA GL+ +G+ GD V I + N +EW+LA A IG I+ +N +
Sbjct: 59 RTFAHEIDVLAAGLVALGIEPGDRVGIWSPNR---VEWLLAQFATARIGAILVNINPAYR 115
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE--------LQHTA--------IPSLRWHVSL 135
E A+ + L+ E S YLE L H A +PSLR VS+
Sbjct: 116 LAELEYALNKVGCRALIAAEQFKSSKYLEMLQALAPELAHCAPGELHAARLPSLRTVVSM 175
Query: 136 GSS-SSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
G + D++ D L L ++ T A + I FTSGTTGSPKG ++
Sbjct: 176 GEVVPAGMFRFADVMARGRDTLDVARLDAIGAT--LAATDPINIQFTSGTTGSPKGATLT 233
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKS 250
H ++ + + + E D PL H G+ A +A + GA VF + F+ +
Sbjct: 234 HRNVVNNARFIAMAMCFTEQDSLCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVA 293
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV T+L VP + +A L + +++ + G P E MK +
Sbjct: 294 TLAAVADERCTALHGVPTMF--IAELDHPEFATFDLSTLRTGIMAGSPCPIETMKRVVSQ 351
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++ AYGMTETS P +F + T + + + + VG+ P
Sbjct: 352 MHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRVQP 391
Query: 371 HVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
H+E+K+ V G + T+G VM YWD AK + + W+ TGD+ ++D
Sbjct: 392 HLEVKIVDPNGDVVPVGATGELCTKGYSVMPGYWDDD-AKTQETIVDGWMHTGDLATLDA 450
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +VGR + GGEN+YP E+E L +HP I + V G+ +A+ E + A + LR
Sbjct: 451 DGYCNIVGRLKDMVIRGGENIYPREIEEFLFRHPKIQSVQVFGVPDAKYGEELCAWIVLR 510
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
Q SE + +R C + + +K P+ +V + P+T TGK++
Sbjct: 511 TDEQMSEDD----------------VRAFCHGQ-IAHYKIPK-YVCFVDELPMTVTGKVQ 552
Query: 546 RDEVRREVMS 555
+ +R++++
Sbjct: 553 KFVMRQQMID 562
>gi|418249636|ref|ZP_12875958.1| O-succinylbenzoate-CoA ligase [Mycobacterium abscessus 47J26]
gi|420951628|ref|ZP_15414873.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|420955798|ref|ZP_15419036.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
gi|420961442|ref|ZP_15424668.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|420991769|ref|ZP_15454918.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|420997607|ref|ZP_15460745.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|421002045|ref|ZP_15465171.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|353451291|gb|EHB99685.1| O-succinylbenzoate-CoA ligase [Mycobacterium abscessus 47J26]
gi|392159710|gb|EIU85404.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0626]
gi|392187069|gb|EIV12711.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0307]
gi|392187319|gb|EIV12960.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0912-R]
gi|392197258|gb|EIV22873.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0912-S]
gi|392251476|gb|EIV76948.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-1231]
gi|392254510|gb|EIV79975.1| acyl-CoA synthetase [Mycobacterium massiliense 2B-0107]
Length = 517
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 152/554 (27%), Positives = 246/554 (44%), Gaps = 62/554 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I Q ++R A + I+ H T + +A L+ +G+R GD VA+ +NS
Sbjct: 5 IGQWVTRRAFLNGGRTALISNGAHITYADLDRRTNQVAAALIALGVRKGDRVAMLLVNST 64
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
++E +L A +G + PLN R + E + +LV E + +
Sbjct: 65 EFIEVLLGCAKMGALAVPLNVRLAGPEIGYILADSGADVLVFHEPFAAQARSAVTESGVR 124
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
+R V G + ++ D++ G +L P I +TSGTTG PKG
Sbjct: 125 VRHVVRAGGVPA----PGELGYEDVVSGAALE--PLNGDVDGSDPAFIMYTSGTTGRPKG 178
Query: 189 VVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
+++H L+ ++ + +G +DV + AP+ HIGGL + +L VG V +P F
Sbjct: 179 AILTHDNLLWNAINVLGTDIGLRGEDVTVAVAPMFHIGGLGVHTLPLLYVGGTSVIMPSF 238
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP---SEL 303
E ++ L+A+ H VT VPA+ L + +++ + GG +P +
Sbjct: 239 EPRATLQAMADHHVTVQFMVPAMWTALTQVSDFDSF--NLSALRFAMGGGSPVPLTVIDF 296
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
M+E F + +GMTET+ +T + ++ + G
Sbjct: 297 MRERGVPFTEG-----FGMTETAPLVTVLD--------------------AENISKRAG- 330
Query: 364 CVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
+G+ A HV+ ++ D VG ++ RG +V YW + A G W TG
Sbjct: 331 SIGRVAMHVDARIVDDDDRDVATDTVGELIVRGPNVFTGYWMKAEASAEALRGG-WFHTG 389
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+G +D G + LV R+ I SGGENVYP EVE VL +HP ++ V+G +++ E V
Sbjct: 390 DLGRMDAEGFITLVDRKKDMIISGGENVYPIEVEQVLFRHPAVLDAAVIGGKDSKWGERV 449
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
VA V + Q S+E + CRE+ L FK PR V + P
Sbjct: 450 VAIVVADPATQAP---------------SAEEIVAWCRER-LAHFKCPR-DVHFVAELPR 492
Query: 539 TSTGKIRRDEVRRE 552
+TGK+ + E+R +
Sbjct: 493 NATGKLLKTELRAQ 506
>gi|375107842|ref|ZP_09754103.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
gi|374668573|gb|EHR73358.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
Length = 562
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 245/556 (44%), Gaps = 65/556 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
+R + V + + QQ V A GL +G+R G V I + N +L A A
Sbjct: 42 QREAAVFVEQGQRFNWQQLHDAVETTAAGLWALGVRRGHRVGIWSPNRAEWLLTQFATAR 101
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQH----------TAIPS 128
IG ++ +N + E A+ +LVT + S YL L T +P+
Sbjct: 102 IGAVLVNINPAYRLSELEYALNKSGVSLLVTAAAFKGSNYLGLLQNLGVGQAGGTTRLPA 161
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
L + +G ++ + L A L + SLP A + I FTSGTTG+PKG
Sbjct: 162 LASVLRMGDEATAGMRNWHELAA--LGRDARASLPPESELACHDPINIQFTSGTTGAPKG 219
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-F 246
++H ++ ++A + + E D PL H G+ A +A + GA VF + F
Sbjct: 220 ATLTHHNIVNNAIAVARCMRFSETDSLCIPVPLYHCFGMVLAVLACVATGAKMVFPGEGF 279
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E ++ L AVE T+L VP + +A L + +++ + G P E+MK
Sbjct: 280 EPRATLAAVEDEACTALHGVPTMF--IAELDHPEFRLFDLKTLRTGIMAGAPCPVEVMKR 337
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
++ AYGMTETS P +F + T + + + + VG
Sbjct: 338 VQRDMHMHEVTIAYGMTETS-------------------PVSFQSATDDPLDK-RVATVG 377
Query: 367 KPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
+ PH+E+KV DG + G + T+G VM YW + G W+ TGD+
Sbjct: 378 RVLPHLEVKVVDVDGRTVPVGDKGELCTKGYSVMQGYWGEPERTAEAVRGG-WMHTGDLA 436
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+ID G +VGR + GGENVYP EVE L +HP + + V G+ +AR E + A
Sbjct: 437 TIDAQGYCNIVGRVKDMVIRGGENVYPREVEEFLFRHPKVAAVQVFGVPDARYGEELCAW 496
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
+ + +E LR CR++ + +K PR ++ + + P+T T
Sbjct: 497 IITKPGAACTEDE----------------LRAFCRDQ-IAHYKVPR-YIRFVQELPVTVT 538
Query: 542 GK----IRRDEVRREV 553
GK I R+ + RE+
Sbjct: 539 GKPQKFIMREAMAREL 554
>gi|440695436|ref|ZP_20877976.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
gi|440282494|gb|ELP69941.1| long-chain-fatty-acid--CoA ligase [Streptomyces turgidiscabies
Car8]
Length = 475
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 221/502 (44%), Gaps = 82/502 (16%)
Query: 54 LRSGDIVAISALNSEWYLEWILAVAF----IGGIVAPLNYRWSFKEASRAITSIRPVMLV 109
+ GD VAI A NS EWI+A AF GG++ P+N R+ EA + +++
Sbjct: 51 IEKGDRVAIWAPNSA---EWIVA-AFGLLTAGGVLVPVNTRFKADEAHDIVRRSGAKLVL 106
Query: 110 TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA 169
+E +L L DF + D+ G+ PF + +
Sbjct: 107 IEEG----FLGL-------------------DFEGPPGVPVIDLKSGFLASGSPFERAVS 143
Query: 170 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 229
+ I FTSGTTG PKGV+++H+ + + E D YL P HI G +
Sbjct: 144 GDDVSDIAFTSGTTGRPKGVLMTHAQTLRLYGEWCDLATLREGDRYLIVNPFFHIFGYKA 203
Query: 230 AM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 288
+ A L+ GA + +P F+ LE VE+ VT L P + L + S
Sbjct: 204 GLIASLIRGATILPVPVFDVDRVLELVEREKVTVLPGPPTLYHSLLA----AGDRRDLSS 259
Query: 289 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 348
++ + G +P EL++ + P +++ YG+TE + T PG +
Sbjct: 260 LRVAVTGSADIPVELIRRIVHDLPFQHIMTGYGLTEAGTV---------TASRPGD---S 307
Query: 349 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 408
F ++ VG P VE+ V DG +L RG VM Y D A
Sbjct: 308 FEDIA---------TTVGTPCDGVEVSVADDGE-----VLVRGYSVMRGYLDDPAATAET 353
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ WL TGD+G++D+ G++ +VGR+ GG N YP E+E LL+HP + V+G
Sbjct: 354 IDADGWLHTGDLGTLDERGHLRIVGRKKDMFIVGGFNAYPAEIEGFLLEHPAVAQAAVIG 413
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + RL ++ A V + + D EL+ S + GFKAPR
Sbjct: 414 VPDERLGQVGKAFV-----VRAGDVTAD------ELIAWSRA--------RMAGFKAPR- 453
Query: 529 FVLWRKPFPLTSTGKIRRDEVR 550
FV + + PL +TGK+ +D++R
Sbjct: 454 FVEFLEELPLNATGKVMKDQLR 475
>gi|239906600|ref|YP_002953341.1| AMP-binding domain protein [Desulfovibrio magneticus RS-1]
gi|239796466|dbj|BAH75455.1| putative fatty-acid--CoA ligase [Desulfovibrio magneticus RS-1]
Length = 551
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 245/555 (44%), Gaps = 64/555 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+++VV + + T QQF + LA+GL+ +G++ G+ VA+ A N +++ + A A +
Sbjct: 26 QDAVVYVDRDYRLTWQQFDELTDELAKGLMALGIQKGEKVAVWATNVPFWVALMFATAKM 85
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
G ++ +N + E +T S + + + DS Y+E+ + P LR S
Sbjct: 86 GAVLLTVNTAYKRNELKYLLTNSDADNIFIINGFRDSDYIEILYDLAPELRNMQRGAIRS 145
Query: 140 SDFVNKRDMLTADILKGYSLRSLP---------FTHSWAPEGAVIIC-------FTSGTT 183
F + + + + K + S+P A C +TSGTT
Sbjct: 146 ETFPHLKRVCFLGVEKHRGMYSIPEIIGLARTVTDEELKARQATFNCHDVVNMQYTSGTT 205
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF 242
G PKGV++SH ++ + + D L PL H G + MA L G VF
Sbjct: 206 GFPKGVMLSHHNILNNGYSIGQRQRFTNKDKLLIHVPLFHCFGCVLGVMACLNHGTTMVF 265
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
F+ ++ ++EQ T++ VP + +A L S++ + G P +
Sbjct: 266 TEVFDPVKSMMSIEQEKCTAVYGVPTMF--IAMLEHPLFPKFDFSSLRTGIMAGSVCPVQ 323
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
M++ T ++ S Y +TE+S +T + DP + +
Sbjct: 324 TMRQVTEKMYMKQITSVYDLTESSPGMTQSDVDDP--------------------YHYRV 363
Query: 363 VCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VGK PHVE+KV ++ G + RG + M Y+ A + WL
Sbjct: 364 ESVGKAFPHVEVKVLDPETNEEVERGKQGEVCCRGYNAMKGYYKNPEATAKCIDADGWLH 423
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
+GD+G +D+ G V + GR I GGEN+YP E+E L PGI + V G+ + + E
Sbjct: 424 SGDLGVMDENGFVVITGRIKDMIIRGGENIYPREIEEFLYTMPGIADVQVAGVPSRKYGE 483
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
V A + LR K++ ++ E ++ CR + + K P+ ++ + + F
Sbjct: 484 EVGAFIILR----------------KDVEMAPEDVKDFCRGQ-IAWHKIPK-YIAFVEEF 525
Query: 537 PLTSTGKIRRDEVRR 551
PLT++GK+++ ++R
Sbjct: 526 PLTTSGKVQKYKLRE 540
>gi|410090765|ref|ZP_11287350.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
gi|409761922|gb|EKN46964.1| AMP-binding domain protein [Pseudomonas viridiflava UASWS0038]
Length = 557
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 232/537 (43%), Gaps = 68/537 (12%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRA 99
++V +AR LL +G+ G + I A N + LA A IG ++ +N + E + A
Sbjct: 51 REVDTVARALLALGIDKGQRIGIWAPNCAQWCITQLASAKIGAVLVNINPAYRTSELTYA 110
Query: 100 ITSIRPVMLVT-DESSDSWYLELQHTAIPSL------RWHVSLGSSSSDFVNKRDMLTAD 152
+ LVT D DS Y + +P L WH ++ D +
Sbjct: 111 LQRSGCSWLVTADCFKDSDYHAMLGQIVPQLLTRTPGAWHSEALPELRGVISLADSPPSG 170
Query: 153 ILKGYSLRSLPFTHSWAPEG------------AVIICFTSGTTGSPKGVVISHSALIVQS 200
+L +L SL S P+ + I +TSGTTG PKG +SH ++
Sbjct: 171 MLAWRALHSL--AESTPPDALELRAASLEVCDPINIQYTSGTTGFPKGATLSHRNILNNG 228
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSALEAVEQH 258
+G G +D + PL H G+ +A L GA ++ P FE + LEAV
Sbjct: 229 YMVGYNLGLGSEDRLVIPVPLYHCFGMVMGNLACLTHGATMIYPAPSFEPLATLEAVASE 288
Query: 259 CVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLIS 318
T L VP + + L + S+K + G P E+M++ + + +
Sbjct: 289 RATFLYGVPTMF--IKELDLPDRQALDLSSLKGGIMAGSICPIEVMRQVIDQMHMSGVQI 346
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
AYGMTETS ++ T D LE VT VG+ PH+E KV
Sbjct: 347 AYGMTETSP-VSLQTSNDDPLEL---------RVT----------SVGRTQPHLEHKVID 386
Query: 379 DGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
++ VG + TRG VML YW A E W+ TGD+ +D G V +VG
Sbjct: 387 TDANTVERGQVGELCTRGYSVMLGYWQDAEATARDIDAEGWMHTGDLVQMDADGYVTIVG 446
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R I GGEN+YP E+E +LLQH I VVGI R E +VA VRL
Sbjct: 447 RSKDMIIRGGENIYPREIEELLLQHSDIAEAYVVGIPCDRYGEDLVAWVRLHPG-----H 501
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
C++ +LR R + + FK PR F + FP+T TGK+++ +R
Sbjct: 502 VCEEP-----------LLRDFFRSR-VAHFKVPRHF-FFVDEFPMTVTGKVQKFRLR 545
>gi|423531125|ref|ZP_17507570.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HuB1-1]
gi|402444988|gb|EJV76866.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HuB1-1]
Length = 518
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 143/543 (26%), Positives = 241/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCHEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ DS W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVDSTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ T S+K + GG + L+K
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVK 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 294 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 346 NEDAPAEPDDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 401
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 402 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 460
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 461 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 503
Query: 544 IRR 546
+++
Sbjct: 504 LQK 506
>gi|383642924|ref|ZP_09955330.1| AMP-binding domain protein [Streptomyces chartreusis NRRL 12338]
Length = 532
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 233/546 (42%), Gaps = 67/546 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T QF V LA LL G+ GD V I A+N EW+L A
Sbjct: 31 DREALVDVPSGRRWTYAQFGAAVDELASALLASGVAKGDRVGIWAVNCP---EWVLVQYA 87
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVML---VTDESSD-SWYLELQHTAIPSLRWH 132
A IG I+ +N + E + +L ++ ++SD ++ LR
Sbjct: 88 TARIGAIMVNINPAYRTHEVEYVLKQAGISLLFASLSHKTSDYRAMVDEVRGRCADLREV 147
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
V +G S D + R A I + + + + I +TSGTTG PKG +S
Sbjct: 148 VYIGDPSWDALLGRGTPGARITE----------DGLSCDDPINIQYTSGTTGFPKGATLS 197
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ ++ Y E D P H G+ +A GAC V P F+ K+
Sbjct: 198 HHNILNNGYFVGELIAYTEQDRICIPVPYYHCFGMVMGNLAATSHGACMVIPAPSFDPKA 257
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
LEAV+Q TSL VP + +A L S++ + G P E+MK
Sbjct: 258 TLEAVQQERCTSLYGVPTMF--IAELNLPGFASYDLSSLRTGIMAGSPCPVEVMKRVVAE 315
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS ++ T D LE H+ VG+ P
Sbjct: 316 MHMQQVSICYGMTETSP-VSLQTRMDDDLE-----------------HRTG--TVGRVLP 355
Query: 371 HVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+K+ + G + TRG VML YW++ W+ TGD+ +
Sbjct: 356 HIEVKIVDPATGVTRPRGTAGELCTRGYSVMLGYWNEPEKTAEAVDAGRWMHTGDLAVMR 415
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP E+E L HP I + VVG+ + R E V+ACV
Sbjct: 416 EDGYVEIVGRIKDMIIRGGENIYPREIEEFLYAHPKIQDVQVVGVPHDRYGEEVLACV-- 473
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ L+ + LR C+ + L +K P L FP+T +GK+
Sbjct: 474 -------------IPHDPADPLTLDELRTFCQGR-LAHYKIPTGLQLLDS-FPMTVSGKV 518
Query: 545 RRDEVR 550
R+ E+R
Sbjct: 519 RKVELR 524
>gi|229154578|ref|ZP_04282695.1| Acyl-CoA synthase [Bacillus cereus ATCC 4342]
gi|228628976|gb|EEK85686.1| Acyl-CoA synthase [Bacillus cereus ATCC 4342]
Length = 516
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 240/538 (44%), Gaps = 52/538 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPSSSFWYVEDDTPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI G + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNEASSEKVDIEIG----EMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEEAPAEPN 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 353 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 409
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 410 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVVV----------- 458
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K+ ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 459 ------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 509
>gi|423467296|ref|ZP_17444064.1| hypothetical protein IEK_04483 [Bacillus cereus BAG6O-1]
gi|402414530|gb|EJV46862.1| hypothetical protein IEK_04483 [Bacillus cereus BAG6O-1]
Length = 518
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 239/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAMIERNFPNTSFWYVEDDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSEKVDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ + S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLSQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-TKSLYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 412 VDDMVISGGVNIYPREIEDYLHSHPGILDVAVLGEPDELWGERVVAVIV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L ++C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 ------KKDETITEADLEKYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|384135554|ref|YP_005518268.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289639|gb|AEJ43749.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 566
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 145/559 (25%), Positives = 248/559 (44%), Gaps = 70/559 (12%)
Query: 16 IAAVKRN----SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYL 71
IAA RN ++V + + + + V LA GL ++GL+ GD V + N ++
Sbjct: 40 IAARNRNPYKTALVQVERGIRLSYENLYEQVTALASGLSQLGLKKGDRVVVCMPNWPEFV 99
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSW-----YLELQHT 124
+ A++ +G I+ P N R E + + + ++ ++ D+ +LE Q
Sbjct: 100 ISLYAMSMLGLILVPANPRLRRHEIEFIVQNSGAKAALVAHSDTKDALSHYELFLECQ-A 158
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
+P L HV S ++ + A +L+ + + P I +TSGTTG
Sbjct: 159 HVPGLE-HVVAVSPGDRSALEKGVSFAHLLEMGRKHRIASAINVKPADVAAIVYTSGTTG 217
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP 244
PKG +++H +L+ + A + + DV L P CHI GLS + +++G+ VF+
Sbjct: 218 VPKGAMLTHQSLLFSANRMNAALENSDRDVVLVVVPACHIFGLSVTLMGVLMGSTVVFME 277
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-----DSVKKILNGGGGL 299
+F + + VE+ VT + ++T+ ++ R S++ +
Sbjct: 278 QFHPEDVFKVVEREKVT-------VHHGVSTMFVLELNHPNRKHYDLSSLRTGIVAAAPC 330
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P E+++ + ++S YGMTE S +LT + P +
Sbjct: 331 PYEIVQRIRSELGLNPILS-YGMTECSPALTATHFENE--------PWVYAT-------- 373
Query: 360 PQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
VG+P P V L V + + HVG ++ +ML Y++ A + W
Sbjct: 374 -----VGRPLPGVALAVVDENGNFLPPDHVGELVANSPGLMLGYYNNEEATKAAIDERGW 428
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
TGD+ SI++ G V +VGR I GG +YP+EVE +L Q P + VVG+ + L
Sbjct: 429 FHTGDLASINEAGYVTIVGRIKEMINRGGLKIYPKEVEELLYQLPAVQEAAVVGVPDPVL 488
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E ACV L+ +E E +R++CR+ NL FK P F+
Sbjct: 489 GERSCACVTLKPGHTLTE----------------EEIREYCRQ-NLADFKVPD-FIEILD 530
Query: 535 PFPLTSTGKIRRDEVRREV 553
PL S+GKI + E+ +++
Sbjct: 531 EMPLNSSGKIYKLELAKQM 549
>gi|359771954|ref|ZP_09275394.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359310909|dbj|GAB18172.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 547
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 156/550 (28%), Positives = 238/550 (43%), Gaps = 85/550 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLN--YR 90
T ++ ++V LA GLL G+ GD V + + N SEW + A A IG I+ +N YR
Sbjct: 54 TYRELHREVEALAAGLLRSGIAKGDRVGVWSPNRSEWTMVQ-YATAAIGAILVNINPSYR 112
Query: 91 WS---FKEASRAITSIRPVMLVTDESSDSWY---LELQHTAIPSL---------RWHVSL 135
+ F IT++ DS Y LE T++P+L W L
Sbjct: 113 QTEVDFALGQSGITTV----FAAPRFKDSDYPGMLERARTSVPNLTSVVIFESAEWQALL 168
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
S+D +R + A + SL P+ + I +TSGTTG+PKG ++H
Sbjct: 169 TDPSAD---ERGAVAA---RAASLH---------PDDPINIQYTSGTTGAPKGATLTHRN 213
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKSALE 253
++ ++ Y + D P H G + +A GA V P F+ + L
Sbjct: 214 ILNNGYFVGELINYTDADRVCLPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPAATLS 273
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AVE++ TSL VP + +A L +++ + G P ++M++
Sbjct: 274 AVEKYQCTSLYGVPTMF--IAELSLPNFDDYDLTTLRTGIMAGSPCPEQVMRQVVERMHM 331
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ YGMTETS T T D LE + VG+ PH+E
Sbjct: 332 SEVSICYGMTETSPVST-QTRADDELEL-------------------RVTTVGRVGPHLE 371
Query: 374 LKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+KV + G TRG VM YW+Q V E W+ TGDI + D G
Sbjct: 372 IKVVDPVTGETVPRGTPGEFCTRGYSVMQGYWNQPEKTAEVLDAEGWMHTGDIAVLADNG 431
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V + GR + GGEN+YP E+E L HP I+ V+G+ +A+ E ++A VRLR+
Sbjct: 432 YVQITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMAWVRLRDG 491
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
D + ++ ++ R K PR +V FP+T TGK+R+
Sbjct: 492 V------ADFTVEDLRTFADGQIARH----------KIPR-YVRVVDEFPMTVTGKVRKV 534
Query: 548 EVRREVMSHL 557
++R E + L
Sbjct: 535 QMRTEAVELL 544
>gi|326383718|ref|ZP_08205403.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197482|gb|EGD54671.1| AMP-dependent synthetase and ligase [Gordonia neofelifaecis NRRL
B-59395]
Length = 558
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 254/571 (44%), Gaps = 90/571 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
++++ +R T +F +DV+ LA GLL G+ GD V + A N EW+L A A
Sbjct: 39 DALIDAAVDRTWTYAEFRRDVVALAAGLLRHGVAPGDRVGLWAPNR---FEWVLTQFAAA 95
Query: 79 FIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWY---LELQHTAIPSLRWHVS 134
IG I+ +N + E + A+ S ++L + DS Y L+ P LR V
Sbjct: 96 EIGAILVVINPSYRRHELAYALKQSGTSLVLAAERFRDSEYAQMLDDVRDQTPDLREVVL 155
Query: 135 LGSSSSDFV-----NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGV 189
S++ + ++ A+I G LR+ + + I +TSGTTGSPKGV
Sbjct: 156 FESATFTQMLEAPSDEEMAQVAEIAAG--LRA---------DDPINIQYTSGTTGSPKGV 204
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFI-PKFE 247
++H + A++ Y E D P H G + +A + G+ V P F+
Sbjct: 205 TLTHLNIGNNGYLVGALLEYTEADRICLPVPFYHCFGMVMGNLAAIAFGSAMVIPGPAFD 264
Query: 248 SKSALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--------------SVKKI 292
K+AL AVE++ TSL VP + +A+LA L + G + S++
Sbjct: 265 PKTALAAVEKYRCTSLYGVPTMFIAELALL----DSGAGSEASGPSAHGETFDLSSLRTG 320
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P ++M+ +++ YGMTETS T T D L+
Sbjct: 321 IMAGSPCPEQVMRRVIGEMNMSQVSICYGMTETSPVST-QTRMDDDLDL----------- 368
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 406
+ VG+ PH+E+K+ + G TRG VM YW+
Sbjct: 369 --------RVATVGRVGPHLEIKIADPITGETLPRGETGEFRTRGYSVMKGYWNDPEKTA 420
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ W+ TGD+ + D G V + GR + GGEN+YP E+E L HP I+ V
Sbjct: 421 DALDADGWMATGDLAVMGDDGYVRITGRIKDMVIRGGENIYPREIEEFLYTHPDIVDAQV 480
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+G+ + + E ++A +R+RE Q +++E +R+ N++ K P
Sbjct: 481 IGVPDEKYGEELMAWIRVREGAQ---------------PMTAETIREFA-AGNISRHKIP 524
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
R +V FP+T TGK+R+ E+R + L
Sbjct: 525 R-YVHVVDEFPMTVTGKVRKVEMRERSIEFL 554
>gi|229165810|ref|ZP_04293577.1| Acyl-CoA synthase [Bacillus cereus AH621]
gi|228617624|gb|EEK74682.1| Acyl-CoA synthase [Bacillus cereus AH621]
Length = 516
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 246/546 (45%), Gaps = 53/546 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 77 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAMIERDFPNSSFWYVEDDAPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + F + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNEASAEKVDIV----VDEMDFCS---------MLYTSGTTGHPKGVLHRHRD 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 184 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTM---WNMLLQKDLTKYDLTSMKIGVYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 353 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 409
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPG++ + V+G + E VVA +
Sbjct: 410 VDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVI------------ 457
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
K E++ ++ L +C+E + L +K PR + L+ P ++GK+++ V RE
Sbjct: 458 ----VKKDEMITEAD-LETYCKESDELADYKRPRHY-LFMDELPRNASGKLQK-FVLRES 510
Query: 554 MSHLKS 559
+ +K
Sbjct: 511 LKGMKK 516
>gi|54027564|ref|YP_121806.1| long-chain-fatty-acid--CoA ligase [Nocardia farcinica IFM 10152]
gi|54019072|dbj|BAD60442.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 523
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 154/556 (27%), Positives = 244/556 (43%), Gaps = 58/556 (10%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
H L+ A ++ ++V T +Q + A L G+ GD V I ALN
Sbjct: 18 HWNNQLATHALMRPDAVALRFKGVDTTWKQLHERSEKFADALARRGVGFGDRVLILALNY 77
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+E + + +G I P+N+R + E + ++ +VTD ++ A
Sbjct: 78 PEYIEAVFGINALGAIAVPVNFRLTPPEVAYIVSDSGAKAIVTDTMLQPLAAAVRADAP- 136
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
+L V +G S + V D A+ ++ +P + +I +TSGTTGSPK
Sbjct: 137 ALETLVVIGGRSDEGVLGYDDALAEDGAPHAPLDIP------EDTPSLIMYTSGTTGSPK 190
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--K 245
G V++H+ + Q+L I + + V T+PL HI GL S M+GA V P
Sbjct: 191 GAVLTHANMNAQALTCIRAMEITPESVGFCTSPLFHIAGLGSLAPYFMLGAKTVLHPLGA 250
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LM 304
F L+AVE T+ VPA I + T K R K+L+ G S+ ++
Sbjct: 251 FNPTEFLDAVEAEQATTAFCVPAQW----QAICAEPTVKQRKLALKMLSWGAAPASDSVL 306
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
+ FP+A+ ++ +G TE S + D L G
Sbjct: 307 RAMAECFPEAQNVAVFGQTEMSPITCVLEGKD-ALRKLGS-------------------- 345
Query: 365 VGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
VGKP P +++++ D VG I+ RG +M YW++ A G W +GD
Sbjct: 346 VGKPIPTIQVRIVDDEMNDVAPGEVGEIVYRGPTLMQGYWNKPEATADAFEGG-WFHSGD 404
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ D+ G VW+V R+ I SGGEN+Y EVE VL HP I V+G ++ + E+ V
Sbjct: 405 LVRTDEEGFVWVVDRKKDMIISGGENIYCAEVENVLFSHPKIREAAVIGRSHDKWGEVPV 464
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A V L +N D EL + +NL +K P+ V+ + P
Sbjct: 465 AIVAL--------NNPDDELTLDEL--------EPFLNENLARYKHPKDLVVVAE-LPRN 507
Query: 540 STGKIRRDEVRREVMS 555
++GK+ + ++R++ S
Sbjct: 508 ASGKVVKVQLRKDYSS 523
>gi|383773305|ref|YP_005452371.1| putative long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp.
S23321]
gi|381361429|dbj|BAL78259.1| putative long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp.
S23321]
Length = 526
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 231/516 (44%), Gaps = 55/516 (10%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
+A LL +G++ GD +A NS+ Y E ++ G ++AP+N+R + E + +
Sbjct: 45 KVANALLAMGVKKGDRIAYLGKNSDLYFELLMGAMKAGVVMAPVNWRLAGPEVAFIVGDC 104
Query: 104 R-PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSL 159
+ PV+ V E + +PS+R ++ + DF RD + D K
Sbjct: 105 KAPVLFVGPEFITQ--VRQIKDQLPSVRTVITTEGGAPEWQDFTAWRDAQSGDDPK---- 158
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDV 214
+P + I +TSGTTG PKG ++SH+ + VQ+ K + +DV
Sbjct: 159 --VPIDT----KDIAIQLYTSGTTGKPKGAMLSHANFLNLVQTGNAADKPEWNRWSTEDV 212
Query: 215 YLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLA 274
L P+ HIGG + L GA V +F+ L EQ +T L VPA M +
Sbjct: 213 SLVAMPIFHIGGSGWGVMGLYHGARGVIAREFDPTKVLAFFEQSGITKLFMVPAAMQFVV 272
Query: 275 TLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
R + R +K +L G +P+ L+KE F K + YGMTET+ ++ +
Sbjct: 273 RQPRARTVDFSR--LKYMLYGASPIPAALLKECIEVF-KCGFVQMYGMTETTGTIVALPP 329
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHV 394
D +E ++ A G P V GKP P E VG I TR
Sbjct: 330 ED-HVEGLERMRSA-GKALPG-VEIAILDVEGKPLPPRE----------VGEIATRSGSN 376
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
M YW+ A S G+ WL TGD G +D+ G +++ R I SGGEN+YP EVE+
Sbjct: 377 MAGYWNLPEATASTLRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENIYPAEVESA 436
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L HP + V+GI + + E V A V ++ Q + ++ +
Sbjct: 437 LCDHPDVAEAAVIGIPDEKWGEAVKAVVVMKPGKQATATD----------------IINF 480
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
RE+ + GFK P+ V + P +GKI R ++R
Sbjct: 481 TRER-IAGFKTPKS-VEFLPALPRNPSGKILRRQLR 514
>gi|51891936|ref|YP_074627.1| long-chain fatty-acid-CoA ligase, partial [Symbiobacterium
thermophilum IAM 14863]
gi|51855625|dbj|BAD39783.1| putative long-chain fatty-acid-CoA ligase [Symbiobacterium
thermophilum IAM 14863]
Length = 501
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 145/512 (28%), Positives = 226/512 (44%), Gaps = 71/512 (13%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
+A LLE G+R GD VA+ + N L + A +G I P N+R + + +R
Sbjct: 55 MAHFLLEQGVRRGDRVAVLSQNCLEMLTLLFACGKLGAIYVPYNWRLT-------VAELR 107
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
P++ TD +Y A+ L+ +G + D L GY + P
Sbjct: 108 PLVADTDPRI-FFYGPHFEQAVAELQPPKPVGLLNLD------------LSGYPEETPP- 153
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
PE +I +T GTTG KG V+SH A++ + IA DD P H
Sbjct: 154 APDLDPEDPWMILYTGGTTGRSKGAVLSHRAVLWNAWNTIAGWTLSPDDRVPILTPFFHT 213
Query: 225 GGLSSAMAMLM-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
GGL+ L+ +G C + + F+ L+AVE+ +T + VP + + R +T
Sbjct: 214 GGLNVFTTPLVELGGCSILMGPFDPGELLDAVEKERLTVIFMVPTMFKMVMDHPRFAETD 273
Query: 284 KGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPG 343
R V+ +++GG P + + K+ YG+TE
Sbjct: 274 FSR--VRFLISGGAACPEPVQLAYRAKGCQFKI--GYGLTEAG----------------- 312
Query: 344 QLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRY 398
P FG S +P VG P PH++L++ ++ G++ VG +L +G HV Y
Sbjct: 313 --PNTFGMPDHRSWDKPG--SVGFPLPHIQLRIVAEDGRLCGTNEVGELLIKGGHVFSGY 368
Query: 399 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 458
W A + + + WL TGD+ D+ G ++VGR+ SGGENV+P EVE + QH
Sbjct: 369 WRNPEAT-AEALQDGWLHTGDLARRDEEGFYYIVGRKKEMFISGGENVFPLEVEDAIYQH 427
Query: 459 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 518
P + VVGI + + E+ A V L+ + L+ E L +HCR K
Sbjct: 428 PAVAECAVVGIPDPKWGEVGKAFVVLKPG----------------MRLTEEELIEHCR-K 470
Query: 519 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L +K P+ V + P + GKI + E++
Sbjct: 471 LLAKYKIPKQ-VEFLPELPKNAAGKILKRELK 501
>gi|423444203|ref|ZP_17421109.1| hypothetical protein IEA_04533 [Bacillus cereus BAG4X2-1]
gi|423445532|ref|ZP_17422411.1| hypothetical protein IEC_00140 [Bacillus cereus BAG5O-1]
gi|423536693|ref|ZP_17513111.1| hypothetical protein IGI_04525 [Bacillus cereus HuB2-9]
gi|423538048|ref|ZP_17514439.1| hypothetical protein IGK_00140 [Bacillus cereus HuB4-10]
gi|423544271|ref|ZP_17520629.1| hypothetical protein IGO_00706 [Bacillus cereus HuB5-5]
gi|401134032|gb|EJQ41654.1| hypothetical protein IEC_00140 [Bacillus cereus BAG5O-1]
gi|401178074|gb|EJQ85256.1| hypothetical protein IGK_00140 [Bacillus cereus HuB4-10]
gi|401184279|gb|EJQ91384.1| hypothetical protein IGO_00706 [Bacillus cereus HuB5-5]
gi|402411686|gb|EJV44051.1| hypothetical protein IEA_04533 [Bacillus cereus BAG4X2-1]
gi|402460805|gb|EJV92521.1| hypothetical protein IGI_04525 [Bacillus cereus HuB2-9]
Length = 518
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 239/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAMIERDFPNTSFWYVEDDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSEKVDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ + S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLSQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-TKSLYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 412 VDDMVISGGVNIYPREIEDYLHSHPGILDVAVLGEPDELWGERVVAVIV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L ++C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 ------KKDETITEADLEKYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|399545625|ref|YP_006558933.1| acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
gi|399160957|gb|AFP31520.1| Putative acyl-CoA synthetase YngI [Marinobacter sp. BSs20148]
Length = 543
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 152/571 (26%), Positives = 245/571 (42%), Gaps = 68/571 (11%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R A ++V + N T ++F+ V AR L I ++ GD V I + N
Sbjct: 3 IGEMLDRTAEKFPHNEALVCLHQNIRWTYKEFLAKVNEAARAFLAIDVKRGDRVGIWSPN 62
Query: 67 S-EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHT 124
EW + A A IG I+ LN + E A+ S V++ D S Y + +
Sbjct: 63 RYEWTVTQ-FATAKIGAILVNLNPAYGAHELEYAMNLSGISVLVTADRFKASDYRKTLYE 121
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE------------- 171
P L+ + + + R ++ D + + S +A +
Sbjct: 122 LAPELKASAAGKIKARRLADLRAVVNMDTEQHAGMWSWAEFIGFADQVDQKNVDKIQSQL 181
Query: 172 ---GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
+ I FTSGTTGSPKG ++H ++ E D + PL H G+
Sbjct: 182 QFDDPINIQFTSGTTGSPKGAALTHHNILNNGFFVGESQRLSEKDRLVIPVPLYHCFGMV 241
Query: 229 SAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+ + P FE K+ L+AV Q T+L VP + +A L +
Sbjct: 242 MGNLGCVTHGSTMIYPGEGFEPKAVLQAVHQEKATALYGVPTMF--IAELADPEFEIYDL 299
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
+++ + G P+E+M++ ++ AYGMTETS T + DP
Sbjct: 300 STLRTGIMAGSICPAEVMRKVNGKMNMKEVQIAYGMTETSPVSTQTSSQDP--------- 350
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 400
+ Q VG+ PH+E K+ + ++ G + TRG VML+YW+
Sbjct: 351 -----------FEKQVTTVGRTQPHLENKIVEPANGNIVARGTIGELCTRGYSVMLKYWN 399
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
W+ TGD+ ++D+ G + +VGR + GGEN+YP+EVE L HP
Sbjct: 400 NDEKTRETIDDAGWMHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPS 459
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
I + V GI N + E +VA V+LR D S + + L++ C+ K +
Sbjct: 460 IEEVQVTGIPNEKFGEELVAWVKLRP---------DADSVDADDLIA------FCKGK-I 503
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K PR + + + FP+T TGKI++ ++R
Sbjct: 504 AHYKIPRNY-KFVEAFPMTVTGKIQKFKMRE 533
>gi|261419521|ref|YP_003253203.1| long-chain-fatty-acid--CoA ligase [Geobacillus sp. Y412MC61]
gi|319766337|ref|YP_004131838.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261375978|gb|ACX78721.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|317111203|gb|ADU93695.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 524
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 248/541 (45%), Gaps = 54/541 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV R T ++ ++V A LE G+R GD V+ N+ + A A I
Sbjct: 19 REAVVDAATGRRYTYAEWEREVNRWANAFLEAGVRKGDRVSTVLYNTLELATALFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G + P+N+R +E + +T P +++ + + +E + AI S HVS S
Sbjct: 79 GAVFNPINFRLRAEEIAYILTDAEPKIVLFERA-----VEPELAAIHSRFPHVSFWSIDR 133
Query: 141 D---FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D F A +L P H + I+ +TSGTTG PKGV+ H +I
Sbjct: 134 DPPPFAK-----NAHEQAARALGEAPRVHVDESDLYAIM-YTSGTTGRPKGVMHRHRDMI 187
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
QS+ ++ E D L APL H L + + GA + + F++K LE +E
Sbjct: 188 EQSVICHGVMRIRETDCGLAAAPLFHCAELHCCLLPRVHAGAASIILHHFDAKLVLETIE 247
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKA 314
+ +T + P + + +++ G D S++ L G + L+++
Sbjct: 248 RERITIMFGAPTMWNMI-----LQENVSGYDLSSLRLGLYGAAPMAPALVRQCQEQL-GI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+LI AYGMTE ++TF+ L D L+ G +A N H+ + V + P
Sbjct: 302 ELIQAYGMTEMGPAVTFL-LEDEQLKKAGSAGRACLN------HEIRVVRAREDGPSDPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y+ + A + ++ G W +GD+G +D+ G +++
Sbjct: 355 DVLP--PYEVGEIVMRGPCMMAGYYKREEATEKALYKG--WYHSGDLGYLDEDGYLYVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGGENVYP EVE VL +HP ++ + V+G + E VVA V
Sbjct: 411 RVDDMVISGGENVYPREVEDVLYEHPKVLDVAVLGEPDELWGEKVVAFV----------- 459
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K+ LL+++ L Q C+ + L +K PR + P ++GKI++ +R +
Sbjct: 460 ------VKKDDLLTADELEQFCKTSDRLAPYKRPRAYYFI-DALPRNASGKIQKFLLREQ 512
Query: 553 V 553
+
Sbjct: 513 L 513
>gi|389862540|ref|YP_006364780.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
gi|388484743|emb|CCH86283.1| short-chain acyl-CoA synthetase [Modestobacter marinus]
Length = 551
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 163/571 (28%), Positives = 242/571 (42%), Gaps = 83/571 (14%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R AA ++V R T + V DV A GL +G+ GD V I A N
Sbjct: 27 LDRTAARVGDHEALVECASGRRWTYPELVADVDACALGLDALGVGKGDRVGIWAPNCA-- 84
Query: 71 LEWIL---AVAFIGGIVAPLN--YR-----WSFKEASRAITSIRPVMLVTDESSDSWYLE 120
EW+ A +G ++ +N YR + ++A ++ P +D + E
Sbjct: 85 -EWVFVQYGTAKLGAVLVNINPAYRTHELKYVLQQAGISVLVAAPEFKTSDYRA--MVAE 141
Query: 121 LQHTAIPSLRWHVSLGSS------SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAV 174
++ P LR V LG ++ R +LT + +P+ +
Sbjct: 142 VREDC-PELRTVVFLGDPEWEQLLATGRAADRALLTERAAQ------------LSPDDPI 188
Query: 175 IICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAM 233
I +TSGTTG PKG ++H L+ GY E D P H G+ +
Sbjct: 189 NIQYTSGTTGFPKGATLTHHNLLNNGFFVGEGCGYTEADRVCIPVPYYHCFGMGMGNLGC 248
Query: 234 LMVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
GA V P F+ + L+AV+ TSL VP + +A L + S++
Sbjct: 249 TSHGATMVIPAPGFDPAATLQAVQDERCTSLYGVPTMF--IAELALPGFSSYDLSSLRTG 306
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P E+MK + ++ YGMTETS ++ T D L+
Sbjct: 307 IMAGSPCPVEVMKRVVDEMGMTEVTICYGMTETSP-VSTQTGADDDLDR----------- 354
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKP 406
+ VG+ PH+E KV + G + TRG VML YWD+
Sbjct: 355 --------RTSTVGRTHPHLESKVVDPETGLTVPRGTPGELCTRGYSVMLGYWDEPEKTA 406
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
V W+ TGD+ +D+ G + +VGR + GGENVYP EVE L HP I+ V
Sbjct: 407 EVLDAARWMHTGDLAVMDEAGYLNIVGRIKDMVIRGGENVYPREVEEFLYTHPDIVDAQV 466
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+G+ + R E ++A V+LRE + L++E LR C K L FK P
Sbjct: 467 IGVPDERYGEELMAWVQLREGAE---------------PLTAEALRAFCAGK-LAHFKVP 510
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
R +V FP+T TGK+R+ E+R ++ L
Sbjct: 511 R-YVKVVDGFPMTVTGKVRKVEMREVSVTEL 540
>gi|423381174|ref|ZP_17358458.1| hypothetical protein IC9_04527 [Bacillus cereus BAG1O-2]
gi|423626000|ref|ZP_17601778.1| hypothetical protein IK3_04598 [Bacillus cereus VD148]
gi|401253347|gb|EJR59589.1| hypothetical protein IK3_04598 [Bacillus cereus VD148]
gi|401630083|gb|EJS47891.1| hypothetical protein IC9_04527 [Bacillus cereus BAG1O-2]
Length = 518
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 239/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAMIERDFPNTSFWYVEDDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSEKVDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ + S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLSQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-TKSLYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 412 VDDMVISGGVNIYPREIEDYLHSHPGILDVAVLGEPDELWGERVVAVIV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L ++C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 ------KKDEAITEADLEKYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|312128103|ref|YP_003992977.1| amp-dependent synthetase and ligase [Caldicellulosiruptor
hydrothermalis 108]
gi|311778122|gb|ADQ07608.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
hydrothermalis 108]
Length = 553
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/545 (26%), Positives = 235/545 (43%), Gaps = 70/545 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T QF + V + A+G + IG++ G+ VA+ A N YL I A+A IG ++ +N +
Sbjct: 35 TYSQFKKMVDDAAKGFMAIGIQKGEHVAVWATNRLEYLISIFALAKIGAVLVTVNTNYKI 94
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E + S ++ T+ DS YLE L++ +P L+ + +G
Sbjct: 95 YELEYLLKQSDSSTLIFTEGFKDSNYLEIVKKLNPQLQACKKGELENPNLPYLKRLIFVG 154
Query: 137 SSSSDFV---NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
S D + ++ L D+ +R S P+ + + +TSGTTG PKGV+++H
Sbjct: 155 QGSYDGIYNWHEVIELGKDVSDEKLIRR---QKSLEPDEVINMQYTSGTTGFPKGVMLTH 211
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFIPKFESKSAL 252
++ + A + D P H GL + M GA V + F +
Sbjct: 212 KNILNNANAIADCMKLTHKDKLCIPVPFFHCFGLVLGIGACMTKGATMVPLDHFNPLKVM 271
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
E + T L VP + +A L + S++ + G P ++M+E
Sbjct: 272 ETIHFERCTGLHGVPTMF--IAILQHPEFDKFNFSSLRTGIMAGAPCPIKVMREVVEKMH 329
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
++ AYG TE S +T + DP + + VGKP V
Sbjct: 330 MREITIAYGQTEASPVITQTRVDDPL--------------------EFRVSTVGKPLEGV 369
Query: 373 ELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + VG I RG +VM Y+ A + WL TGD+G ID
Sbjct: 370 EVKIVDIHTKKEVPNGVVGEICARGYNVMKGYYKMPEATKQAIDEDGWLHTGDLGYIDQN 429
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G + + GR I GGEN+YP E+E L HP + + VVG+ + E +VA + L+
Sbjct: 430 GYLRITGRLKDMIIRGGENIYPREIEEFLYSHPAVKDVQVVGVPDKVYGEEIVAFIILK- 488
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ +C + KE + + NL+ K PR +V++ FP T+ GK+++
Sbjct: 489 -----DGSCASEEEIKEFV-----------KANLSRHKTPR-YVVFVNEFPTTANGKVQK 531
Query: 547 DEVRR 551
++R
Sbjct: 532 YKLRE 536
>gi|229490610|ref|ZP_04384448.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
gi|226184422|dbj|BAH32526.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
gi|229322430|gb|EEN88213.1| acyl-CoA synthetase family member 2 [Rhodococcus erythropolis
SK121]
Length = 545
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 239/553 (43%), Gaps = 66/553 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
R++++ R T ++F + V LA GLL G+ GD V I A N + A A
Sbjct: 35 DRDALIDHASGRRWTYREFAEQVNGLAAGLLSRGVGKGDRVGIWAPNCPEWTFTQYATAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES---SD-SWYLELQHTAIPSLRWHVSL 135
IG I+ +N + E + LV+ S SD + +E P L + L
Sbjct: 95 IGAILVNINPAYRSHELQYVLEQAGISTLVSAASFKTSDYASMIETVRPQCPDLTSVLLL 154
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
GS D V D L A + + + A+ I +TSGTTG PKG +SH
Sbjct: 155 GSPEWDAV-LADGLAAQ--ASDPAPLAAAQAALSADDAINIQYTSGTTGFPKGATLSHHN 211
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL--------SSAMAMLMVGACHVFIPKFE 247
++ + Y E D P H G+ S AM++ G P F+
Sbjct: 212 ILNNGYFVGELCHYSEVDRVCIPVPFYHCFGMVMGNLACTSHGAAMVIPG------PAFD 265
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+++LEAV+ TSL VP + +A L S++ + G P E+MK+
Sbjct: 266 PRASLEAVQAEKCTSLYGVPTMF--IAELALPDFDSFDLSSLRTGIMAGSPCPVEVMKQV 323
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+ +++ YGMTETS P + + +S+ Q + VG+
Sbjct: 324 IDRMGMSEVSICYGMTETS-------------------PVSLQTRSDDSIEQ-RTETVGR 363
Query: 368 PAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PH+E+K+ + G + TRG VML YW+ W+ TGDIG
Sbjct: 364 VGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWENPEKTAEAIDAARWMHTGDIG 423
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+D+ G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++
Sbjct: 424 VMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMVW 483
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V++RE D L ++ +R C K L +K PR +V FP+T T
Sbjct: 484 VQMRE-------GADD--------LDADSVRAFCTGK-LAHYKIPR-YVHVVDEFPMTVT 526
Query: 542 GKIRRDEVRREVM 554
GK+R+ +R + +
Sbjct: 527 GKVRKIAMREQAI 539
>gi|197105973|ref|YP_002131350.1| long-chain-fatty-acid--CoA ligase [Phenylobacterium zucineum HLK1]
gi|196479393|gb|ACG78921.1| long-chain-fatty-acid--CoA ligase [Phenylobacterium zucineum HLK1]
Length = 533
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/568 (26%), Positives = 244/568 (42%), Gaps = 77/568 (13%)
Query: 3 NYSQAHICQCLSRIAA-VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVA 61
++ Q ++R A V+ ++V R T QF + +A L GLR G +A
Sbjct: 11 DFEQMTTLGDVARYQARVRPDAVALEFEGRATTFGQFDRLTNRVANALAAAGLRKGQRIA 70
Query: 62 ISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDE-----SSD 115
NS+ Y E ++ A G ++ P+ +R + E + + S P++ V E +
Sbjct: 71 YVGKNSDHYFELLVGAAKAGVVMTPIGWRLAPPEVAYIVQDSEAPIVFVGPEVMGHTAEV 130
Query: 116 SWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+ LE + I + G + RD + ++P T P +
Sbjct: 131 AALLERRPQVI-----AMEPGGGERLYETWRDAAPD------TDPAVPVT----PHDVAV 175
Query: 176 ICFTSGTTGSPKGVVISHSALI----VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 231
+TSGTTG PKGV+++H ++ + AK+ +G DD+ L P+ HIGG +
Sbjct: 176 QLYTSGTTGRPKGVMLTHENILGGRRTAAEAKMDWNTWGPDDISLVAMPVAHIGGTGWGL 235
Query: 232 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
LM GA V +F+ L+ +E V+ + VPA + + R + R +K
Sbjct: 236 VGLMNGAKGVVAREFDPMKVLDFIEHDRVSKMFMVPAALQIVVRQPRARSVDFSR--LKY 293
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
IL G +P +L++E F + YGMTET ++ ++
Sbjct: 294 ILYGASPIPLDLLRECMEVF-GCGFVQQYGMTETCGTIVYL------------------- 333
Query: 352 VTPNSVHQPQG----VCVGKPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQF 402
P H P G G P P VE+KV ++G + VG + TR M YW Q
Sbjct: 334 --PPEDHDPAGNPRMRAAGVPMPGVEIKVIDAEGRTLPLGQVGEVATRSVANMAGYWKQR 391
Query: 403 LAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGII 462
A + + WL TGD G +D+ G +++ R I SG EN+YP EVE+ + HP +
Sbjct: 392 EATANTIDADGWLRTGDAGYLDEDGYLYIHDRVKDMIISGAENIYPAEVESAIYGHPAVS 451
Query: 463 GIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTG 522
+ V+G+ + + E V A V + + + + + R + + G
Sbjct: 452 EVAVIGVPDEKWGEAVKAVVVPKPG----------------MTIDPQEIIAFARTR-IAG 494
Query: 523 FKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
FK P+ V + P ++GKI R E+R
Sbjct: 495 FKVPK-SVEVVEAIPRNASGKILRRELR 521
>gi|359777990|ref|ZP_09281264.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
gi|359304844|dbj|GAB15093.1| putative fatty-acid--CoA ligase [Arthrobacter globiformis NBRC
12137]
Length = 557
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 237/541 (43%), Gaps = 64/541 (11%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASR 98
DV LAR LL +G+ G+ V I + N +EW + A A IG ++ +N + E
Sbjct: 56 DDVDRLARALLALGVVKGERVGIWSPNCAEWTI-LQYATAKIGAVLVNVNPSYRSHELEF 114
Query: 99 AITSIRPVMLVT---DESSDSWYLELQHTA-IPSLRWHVSL------GSSSSDFVNKRDM 148
+ MLVT D +SD + Q A P LR V L G + V ++++
Sbjct: 115 VVKQNGMRMLVTAPSDRNSDYVGMARQALAGCPDLRELVFLPDFDMEGLDAGVPVGEQEL 174
Query: 149 LTADILK-----GYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 203
A++LK G+S P + + +TSGTTG PKG ++H ++ +
Sbjct: 175 TYAELLKQADAVGHSELKARMA-GLDPHDPINLQYTSGTTGFPKGATLTHHNILNNGYSI 233
Query: 204 IAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVT 261
++ Y E D + P H G+ + IP F +ALEAV+ T
Sbjct: 234 GELLNYTEHDRVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFTPAAALEAVQDFGGT 293
Query: 262 SLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYG 321
+L VP + +A L +++ + G P E+M + + YG
Sbjct: 294 ALYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSLCPIEVMNRVISEMNMKDVAICYG 351
Query: 322 MTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS 381
MTETS T MT TL+ H+ + VG+ P +E K+
Sbjct: 352 MTETSPVST-MTRGGDTLQ-----------------HRTE--TVGRTMPRLESKIVDLAG 391
Query: 382 SHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
V G + TRG VM YW+Q + W+ TGD+ +DD G V + GR
Sbjct: 392 EVVERGVIGELCTRGYAVMQGYWNQPDKTAEAIDADGWMHTGDLARMDDDGYVVIEGRMK 451
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
+ GGEN+YP E+E L HP I + V+G+ +AR E ++AC+ L+ +
Sbjct: 452 DMVIRGGENIYPREIEEFLYTHPSIQDVQVIGVPDARYGEELMACIILKPGAEP------ 505
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
L + + + CR K L +K PR +V R FP+T +GK+R+ E+R E ++
Sbjct: 506 ---------LDAAAVAEFCRGK-LAHYKVPR-YVDVRDSFPMTVSGKVRKVEMREEAVAR 554
Query: 557 L 557
L
Sbjct: 555 L 555
>gi|358638274|dbj|BAL25571.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 584
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 249/568 (43%), Gaps = 78/568 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAF 79
R ++V N T Q V LA L+ +GL+ GD + I S N+EW L A A
Sbjct: 56 REALVVRHQNVRLTYAALKQRVDALACSLMRLGLKRGDRIGIWSQNNTEWALTQ-FATAK 114
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQ 122
G ++ +N + E A+ + LV + S YLE L+
Sbjct: 115 AGLVLVNINPAYRRAELEYALNKVGCRALVLSPAFKSSNYLEMIGDLAPELAQAEPGKLK 174
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTAD-ILKGYSLRSLPFTHSWAPE----GAVIIC 177
+P+L + +G+ + ML D +L S L + E + I
Sbjct: 175 AAKLPTLEIVIRMGADKT-----HGMLNFDELLHAPSRDELDALETLGDELQFDDPINIQ 229
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
FTSGTTG PKG +SH ++ + E D PL H G+ + L
Sbjct: 230 FTSGTTGQPKGATLSHHNILNNGFFVGEAIRLVEGDRLCIPVPLYHCFGMVMGNLGCLTH 289
Query: 237 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA ++ + FE + LE + + T+ VP + +A L K +++ +
Sbjct: 290 GATMIYPAESFEPLATLETLAEERCTASYGVPTMF--IAMLDHPKFNEFDLSALRTGIMA 347
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK + ++ AYGMTETS P +F + T +
Sbjct: 348 GSPCPIEVMKRVIDKMHMREVTIAYGMTETS-------------------PVSFQSGTDD 388
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVS 409
+ + + VG+ PH+E+K+ + V G + TRG VML YW D+ + +V
Sbjct: 389 PIDR-RVSTVGRVQPHLEVKIVDNEGRIVPRGTPGELCTRGYSVMLGYWGDEAKTREAVD 447
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
G W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I+ + VVG+
Sbjct: 448 AGR-WMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVGV 506
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E + A V +RE SE +R+ C+ + + +K PR +
Sbjct: 507 PDQKYGEELCAWVIVREGQTLSEDE----------------VREFCKGQ-IAHYKVPR-Y 548
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ + FP+T TGKI++ ++R ++ L
Sbjct: 549 IRFVDTFPMTVTGKIQKFQIREQMKREL 576
>gi|423555308|ref|ZP_17531611.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MC67]
gi|401196712|gb|EJR03650.1| O-succinylbenzoate-CoA ligase [Bacillus cereus MC67]
Length = 496
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 247/552 (44%), Gaps = 73/552 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ ++ ++ G+ VAI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAVITEEEEITYKQLHEYVSKVAAYLICDLNMKKGERVAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ +
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQN--------------- 112
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
++L +V + +L+ LK R+ + + IIC+TSGTTG+PKG V+
Sbjct: 113 -MALSMEKESYVQR--VLSIKNLKRIENRNNHYFEDINESASFIICYTSGTTGTPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE +
Sbjct: 170 TQKNMFWNALNNTFAIDLTIHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIIPRKFEPIT 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E+H VT ++ VP I L + + T SV+ NGG P EL++E +
Sbjct: 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFEST--NLQSVRWFYNGGAPCPEELIREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
+ V DG+ + VG ++ RG +VM YW++ A G WL TGD+ +
Sbjct: 324 LFCDY-VLIDGNKNKVEVGEVGELIIRGPNVMKEYWNRPDATEETIQGG-WLHTGDLAKV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A V
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINRLSDVCEVAVVGTQHLQWGEIPIAFV- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L EV++ HC L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSSSVLTEKEVIK-HCL-LFLAKYKIPKEIVFLEE-LPKNATGK 483
Query: 544 IRRDEVRREVMS 555
I++ ++ ++ S
Sbjct: 484 IQKVQLANQLKS 495
>gi|126667842|ref|ZP_01738808.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126627658|gb|EAZ98289.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 543
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 150/571 (26%), Positives = 250/571 (43%), Gaps = 68/571 (11%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I + L R A ++V++ N T ++F+ V AR L I ++ GD V I + N
Sbjct: 3 IGEMLDRTAKKFPDNEALVSLHQNIRWTYKEFLAKVNQAARAFLAIDVKRGDRVGIWSPN 62
Query: 67 S-EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHT 124
EW + A A IG I+ +N + E A+ S V++ D S Y + +
Sbjct: 63 RYEWTVTQ-FATAKIGAILVNINPAYGAHELEYAMNLSGISVLVTADRFKASDYRKTLYE 121
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE------------- 171
P L+ + + + R ++ D + + S +A +
Sbjct: 122 LAPELKASTAGKIKARRLADLRAVVNMDTEQHAGMWSWDEFIGFADQVDQKSVDKIQSQL 181
Query: 172 ---GAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGL 227
+ I FTSGTTGSPKG ++H ++ E D + PL H G +
Sbjct: 182 QFDDPINIQFTSGTTGSPKGAALTHHNILNNGFFVGESQRLSEKDRLVIPVPLYHCFGMV 241
Query: 228 SSAMAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+ + G+ ++ + FE K+ L+AV Q T+L VP + +A L +
Sbjct: 242 MGNLGCVTHGSTMIYPGEGFEPKAVLQAVHQEKATALYGVPTMF--IAELADPEFETYDL 299
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
+++ + G P+E+MK+ ++ AYGMTETS T + DP
Sbjct: 300 STLRTGIMAGSICPAEVMKKVNGKMNMKEVQIAYGMTETSPVSTQTSAQDP--------- 350
Query: 347 QAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWD 400
+ Q VG+ PH+E K+ S ++ G + TRG VML+YW+
Sbjct: 351 -----------FEKQVTTVGRTQPHLESKIVEPASGNIVPRGEIGELCTRGYSVMLKYWN 399
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
W+ TGD+ ++D+ G + +VGR + GGEN+YP+EVE L HP
Sbjct: 400 NAEKTRETIDDAGWMHTGDLATMDEDGYIQIVGRIKDMVIRGGENIYPKEVEEFLYTHPS 459
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
I + V G+ + + E +VA V+LR D S + + L++ C+ + +
Sbjct: 460 IEEVQVTGVPDEKFGEELVAWVKLRP---------DADSVDADDLIA------FCKGQ-I 503
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+K PR + + + FP+T TGKI++ ++R
Sbjct: 504 AHYKIPRNY-KFVEAFPMTVTGKIQKFKMRE 533
>gi|452976215|gb|EME76031.1| acyl-CoA synthetase [Bacillus sonorensis L12]
Length = 539
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 238/551 (43%), Gaps = 75/551 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R +VV + + Q+ ++ +A+GL+ +G++ + VAI A N EWIL A
Sbjct: 23 REAVVYSELDLRYSYQELFEETAKIAKGLMALGIQKSEHVAIWASNIP---EWILLQFAT 79
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHT------AIPSLR 130
A IG ++ +N + +E + S + + D + Y+++ H+ A+P L
Sbjct: 80 ARIGAVLVTVNTSYQARELEYLLEHSDSTTLFLMDGYKGTSYIDMIHSITGNQEALPKLE 139
Query: 131 WHVSLGS--------SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
V LG S +D K + ++ D L S +P+ + + +TSGT
Sbjct: 140 RLVYLGHGETPENMISFADLSKKGEFISDDAL-------FERERSLSPDDVINMQYTSGT 192
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHV 241
TG PKGV+++H ++ + +G D PL H G + S +A + GA +
Sbjct: 193 TGFPKGVMLTHYNIVNNAAIVADRMGLTNRDRLCIPVPLFHCFGCVLSTLACVSAGAAML 252
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
I +F++++ L+ VEQ T L VP + +A L S++ + G P
Sbjct: 253 PIIEFKAETVLQTVEQERCTGLQGVPTMF--IAELSHPHFADYDLSSLRTGIMAGSPCPK 310
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK+ + AYG TE+S P + V
Sbjct: 311 EVMKKVMKQMNLTDITIAYGQTESS---------------PVITQTTITDTIERRVE--- 352
Query: 362 GVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VGK PHVE+K+ G G + TRG VM Y+ A + WL
Sbjct: 353 --TVGKVHPHVEIKIIDPETGRALGPHEQGELCTRGYLVMKGYYKMEEATRKAIDKDGWL 410
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ +D G V + GR I GGEN+YP E+E L +H I+ + VVG+ + +
Sbjct: 411 HTGDLAEMDQDGYVRITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVVGVPDEKYG 470
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E A ++ + LS E +R C+ L+ +K P +V
Sbjct: 471 EKTAAFIKCKPGKT----------------LSLEDVRTFCK-GQLSYYKIPE-YVFQLDE 512
Query: 536 FPLTSTGKIRR 546
+PLT++GK+++
Sbjct: 513 YPLTASGKVQK 523
>gi|331699394|ref|YP_004335633.1| long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326954083|gb|AEA27780.1| Long-chain-fatty-acid--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 554
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 243/564 (43%), Gaps = 61/564 (10%)
Query: 9 ICQCLSRIAAVKRN--SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I L R A + + ++V + R T Q +DV +A GL+ GL GD V I A N
Sbjct: 26 IGDNLDRTATAQPDVEALVEVPTARRWTYAQLREDVDVVAMGLMRAGLGKGDRVGIWAPN 85
Query: 67 -SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE---SSDS-WYLEL 121
+EW L A A IG I+ +N + E + MLV+ E +SD +E
Sbjct: 86 MAEWTLVQ-YATAKIGAILVNINPAYRTHELEYVLNQAGIRMLVSAEKFKTSDYVGMIEK 144
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+ P+L V +G + + L G + +P+ + I +TSG
Sbjct: 145 VRGSCPALEQVVIIGGP------EWEALVESGRGGDREELARLQAALSPDDPINIQYTSG 198
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKG +SH ++ + GY +D P H G+ +
Sbjct: 199 TTGFPKGATLSHHNILNNGYFVGRLCGYTAEDRVCIPVPFYHCFGMVMGNLGCTTNGSTM 258
Query: 242 FIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
IP F+ ++ L AV Q TSL VP + +A L S++ + G
Sbjct: 259 VIPAQGFDPEATLRAVAQERCTSLYGVPTMF--IAELNHPDFASYDLSSLRTGIMAGSPC 316
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P E+MK+ + ++ YGMTETS ++ T D ++E
Sbjct: 317 PVEVMKQVVDRMGMTEVTICYGMTETSP-VSTQTRADDSVER------------------ 357
Query: 360 PQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ VG+ PHVE+KV + G + TRG VML YW+Q
Sbjct: 358 -RVSTVGRVHPHVEVKVVDPETGLTVPRGQAGELCTRGYSVMLGYWEQPDKTAESIDAAR 416
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ +D G + + GR + GGENVYP E+E L HP ++ V+G+ + +
Sbjct: 417 WMHTGDLAVMDSDGYLNITGRIKDMVIRGGENVYPREIEEFLYTHPDVLDAQVIGVPDIK 476
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E + A V+LR+ + L++E +R+ K L +K PR +V+
Sbjct: 477 YGEELCAWVKLRDGVEG---------------LTAEQVREFATGK-LAHYKIPR-YVIVV 519
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
FP+T TGK+R+ E+R + + L
Sbjct: 520 DEFPMTVTGKVRKVEMREKSVELL 543
>gi|392957844|ref|ZP_10323364.1| long-chain-fatty-acid--CoA ligase [Bacillus macauensis ZFHKF-1]
gi|391876193|gb|EIT84793.1| long-chain-fatty-acid--CoA ligase [Bacillus macauensis ZFHKF-1]
Length = 519
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/544 (27%), Positives = 254/544 (46%), Gaps = 51/544 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V R T Q+ + V + G++ GD+V++ NS + LA A +
Sbjct: 19 KEAIVDSERGRRYTYSQWNELVNQSVQAFRMSGVKKGDVVSVFLFNSIEFATIFLACAKM 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G I P+N+R +KE + + P + + DE + +LQ A P LR +S +S +
Sbjct: 79 GAIFNPINFRLKWKEVAHIVCDATPALFIYDELLAAEVSQLQK-ADPKLRCWMSSTTSRA 137
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
D + ++ +LP + + A + +TSGTTG PKGV+ H +I QS
Sbjct: 138 DSLQT-------YIQNAPTTALPIEVN--EDEAYSLMYTSGTTGKPKGVLHRHRDMIEQS 188
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHC 259
L + + D L AP+ H L A + + GA + + +F+ K L +E+ C
Sbjct: 189 LICMQALQLRPHDRGLTAAPMFHCAELHCAFLPRIHCGATSIIMSQFQPKQVLSIMEKEC 248
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISA 319
++ + PA+ L++ T D+++ L GG + L+++ ++ A L+ A
Sbjct: 249 ISVMFAAPAM---WNMLMQEDVTQYRLDALRLGLYGGAPMAPILIRKLMDTMGIA-LVQA 304
Query: 320 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
YGMTE +++F LY+ E + + G PN H+ + + KP + +
Sbjct: 305 YGMTEMGPAISF--LYE---EEQERKVGSAGIACPN--HE---IRIVKPVYNETSATMQE 354
Query: 380 -GSSHVGRILTRGAHVMLRYWDQFLAKP-SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 437
G I+ RG +M Y + A ++ +G W TGDIG D+ G +++ R +
Sbjct: 355 LPPFEKGEIIVRGTSMMKGYLGKKQATAQALRSG--WYHTGDIGYKDEDGYLYVSDRIDD 412
Query: 438 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC-VRLRESWQWSESNCD 496
I SGGEN++P EVE VL +H ++ + V G + E VVA VR +E+ E +C
Sbjct: 413 MIISGGENIFPREVEDVLFEHEDVLDVAVFGEPDEVWGERVVAVIVRKKENVSVEELDC- 471
Query: 497 QSSKNKELLLSSEVLRQHCREK-NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
C+E L +K PR ++ + + P ++GKI++ V RE +
Sbjct: 472 -----------------FCQESAQLANYKRPRRYI-FSQELPRNASGKIQK-YVLRESVR 512
Query: 556 HLKS 559
+K+
Sbjct: 513 EIKT 516
>gi|339326069|ref|YP_004685762.1| acyl-CoA synthetase [Cupriavidus necator N-1]
gi|338166226|gb|AEI77281.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Cupriavidus
necator N-1]
Length = 574
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 247/551 (44%), Gaps = 73/551 (13%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++F V LA GL +GL GD V I + N +L A A +G ++ +N + E
Sbjct: 62 REFCDAVDALAAGLHTLGLARGDRVGIWSPNRVEWLVTQFATARLGLVLVNINPAYRLSE 121
Query: 96 ASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSS 138
A+ + +V E+ S YLE LQ +P+LR + +G
Sbjct: 122 LEYALNKVGVKAIVAAEAFKTSRYLEMLQVLAPELATCAPGELQAARLPALRCVIRMGDD 181
Query: 139 SSDFVNKRDMLTADILK---GYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+ + + AD++ G + +L T + + FTSGTTG+PKG ++H
Sbjct: 182 HTPGM----LRYADVIARGTGVARATLDAITAQLDRHDPINVQFTSGTTGAPKGATLTHR 237
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSAL 252
++ + + + E D P H G+ A +A + GA VF + FE ++ +
Sbjct: 238 NIVNNARFIAMAMRFSEQDKLCIPVPFYHCFGMVLAVLACVSSGAAMVFPGQAFEPEATM 297
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+AV + T+L VP + +A L + S++ + G P E MK +
Sbjct: 298 QAVSEERCTALHGVPTMF--IAQLDHPNFSQYDFSSLRTGIMAGSPCPIETMKRVVSQMH 355
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+++ AYGMTETS P +F + T + + + + VG+ PH+
Sbjct: 356 MSEVTIAYGMTETS-------------------PVSFQSSTTDPLDK-RTTTVGRIQPHL 395
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
E+++ + V G + TRG VML YWD A+ + + + W+ TGD+ +ID G
Sbjct: 396 EVRIVDATGATVPVGETGELCTRGYSVMLGYWDD-EARTAEAIRDGWMHTGDLATIDAEG 454
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+VGR + GGEN+YP E+E L +HP + + V G+ + + E V A + L+
Sbjct: 455 YCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPG 514
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+E +R CR++ + +K PR ++ + P+T TGK+++
Sbjct: 515 ASATEDE----------------IRDFCRDQ-IAHYKIPR-YIRFVDEMPMTITGKVQKF 556
Query: 548 EVRREVMSHLK 558
+R + LK
Sbjct: 557 VMRERMTRDLK 567
>gi|423370988|ref|ZP_17348328.1| hypothetical protein IC5_00044 [Bacillus cereus AND1407]
gi|401103844|gb|EJQ11822.1| hypothetical protein IC5_00044 [Bacillus cereus AND1407]
Length = 518
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 238/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI G + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVDIEIG----EMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPN 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV------------ 459
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 460 -----VKKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|88603692|ref|YP_503870.1| AMP-dependent synthetase/ligase [Methanospirillum hungatei JF-1]
gi|88189154|gb|ABD42151.1| AMP-dependent synthetase and ligase [Methanospirillum hungatei
JF-1]
Length = 517
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 162/566 (28%), Positives = 244/566 (43%), Gaps = 62/566 (10%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
++ + H + +IA + S NR T + +LA E GL GD V
Sbjct: 4 ISTFLDTHQARFPDKIALIHPKS------NRSYTYTDLHRLSGSLAVVCEEFGLVPGDRV 57
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLE 120
+ +S YL A+ G + P N + E + AI ML+T SS
Sbjct: 58 VLYLDSSPEYLISYFALWRAGLVAVPTNIVYRKDELAYAIRDSGAKMLITSVSSRD-ITG 116
Query: 121 LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTS 180
L + P L V +G + + L+ D LR +P + P+ I +TS
Sbjct: 117 LMKESCPELVHIVEVGGVGK-YSWENLTLSHD-----PLRPVPCS----PDQVCQIQYTS 166
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH 240
GTTG PKG +++HS + A+ + DD+YL P+ H+G +S +++L G +
Sbjct: 167 GTTGRPKGAMLTHSGWLAALQAEGEALDLTCDDIYLGIYPMAHVG-ISWGLSVLRAGGTY 225
Query: 241 VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
V + ++ + ++ +T L +P ++ L T SV++I++GGG +
Sbjct: 226 VIMERYNLDEYISLTREYQITILAGMPPVIHALTE--TPPGTEDNFTSVRRIISGGGPMH 283
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
S K+ F K +I+AYG++ET + L T+ P P A
Sbjct: 284 SPTWKKFNERF-KIPVINAYGLSET------IVLGCGTVIRPEDYPTA-----------D 325
Query: 361 QGVCVGKPAPHVELKVCSDG-------SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ VGKP + E+K+ G S H G I RG V L YW+Q V +
Sbjct: 326 EYNSVGKPVGYAEVKIVEVGNPAKELTSPHAGEIALRGPGVALGYWNQPEETKEVFMEDG 385
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W TGDIG IDD G + + R+ I G VYP EVE VL+ HP I I + G +
Sbjct: 386 WFLTGDIGYIDDHGMLVITDRKKDMIIMSGWKVYPTEVENVLINHPKISDIAIFGCPDEE 445
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E+ A V LR NKE L+ E L RE+ L G+K PR V+
Sbjct: 446 KGEIPAAAVVLR---------------NKEDTLTLEELSGWSREQ-LAGYKIPRRLVILN 489
Query: 534 KPFPLTSTGKIRRDEVRREVMSHLKS 559
+ P K+ R E+R + S +S
Sbjct: 490 Q-LPRVGGWKLLRRELRESLCSEKRS 514
>gi|196032125|ref|ZP_03099539.1| long-chain acyl-CoA synthetase [Bacillus cereus W]
gi|218904156|ref|YP_002451990.1| long-chain acyl-CoA synthetase [Bacillus cereus AH820]
gi|195994876|gb|EDX58830.1| long-chain acyl-CoA synthetase [Bacillus cereus W]
gi|218538698|gb|ACK91096.1| long-chain acyl-CoA synthetase [Bacillus cereus AH820]
Length = 518
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 250/535 (46%), Gaps = 60/535 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ D +A+S N + A A +G I+ P N +
Sbjct: 32 RRITYKQLKYEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 91
Query: 91 WSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
+ E + S P +L+ + E ++ E + ++ +++ S + +++
Sbjct: 92 YKSYEIEYILESSDPKLLIASGEFEKNFGFE---KVVNKVQKVITVRFSQEGYCPYEELI 148
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VG 208
+ + + H + I +TSGTTG+PKGV+++H A +VQS I +
Sbjct: 149 RTEKM------DIEPVHLNVNDDLFCILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELH 201
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ DV++ +APL HI G++ + + + +G + KF+ + L+ +EQ VT VP
Sbjct: 202 CTQKDVFIISAPLFHIFGMAINMLCAVAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVP 261
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L K S++ L G +P++ + E L ++G+TET S
Sbjct: 262 TMFIKELELEDFDKY--NLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETVS 318
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SS 382
MT YD T + N+T +GK P V +K+ + S
Sbjct: 319 --ITMTSYDDTKQ----------NITET---------LGKAIPGVTMKIVDENRVALPSG 357
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I +G VM Y++ V + W +GD+G++D G + VGR+ I G
Sbjct: 358 EVGEIAVKGFGVMKGYYNMPEQTNQVLDNDGWYYSGDLGTLDSQGYLRFVGRKKEMIIRG 417
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
G NVYP+E+EAV+++HP +I V+G+ + L E+ A +RL+ + +E
Sbjct: 418 GLNVYPQEIEAVIMKHPKVIEAAVIGLPDKVLGEVACAVIRLKNGEESTE---------- 467
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E ++ + +EK + +K P V++ FP+T++GKI++ ++ +V S++
Sbjct: 468 ------EEIKLYLKEK-MAIYKLPEK-VIFTDEFPVTASGKIQKLRLKEQVSSNI 514
>gi|254773858|ref|ZP_05215374.1| long-chain-fatty-acid--CoA ligase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 476
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 225/534 (42%), Gaps = 82/534 (15%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T QQ V+ + A E+G+ GD VA+ A NS EWI+A AF
Sbjct: 20 DAEAVVDGPLRLTFQQVVERIRCAAGAFAELGVEKGDRVAVWAPNSA---EWIIA-AFGL 75
Query: 80 --IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGS 137
GG++ P+N R+ +EA+ I R ++ V G
Sbjct: 76 LTAGGVLVPVNTRFKTEEAADIIVRARVKAVL-----------------------VQKGF 112
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D+ + DI + PF+ I FT+GTTG PKG +++H +
Sbjct: 113 LGQDYAAPAGIPVIDIKSDFLSSGSPFSRPVNGTDISDIIFTTGTTGRPKGAMMNHRQTL 172
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
+ E D YL P H GL + + + GA + +P F+ + ++ +E
Sbjct: 173 RMYDEWATLADLREGDRYLQINPYFHTFGLKAGLITSFLRGATMLPVPVFDVDTVVDLIE 232
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
+ +T L P + L T+ K R V G +P EL++ + P L
Sbjct: 233 RERITMLPGPPTLYHSLLTVPDKSKLATLRAGV----TGAADIPVELVRRIHDELPFQTL 288
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
++ YG+TE + TL PG +F +V + G P VE+++
Sbjct: 289 MTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GVPCEGVEVRI 327
Query: 377 CSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRN 436
DG +L RG VM Y D + WL TGD+G+ + G + +VGR+
Sbjct: 328 ADDGE-----VLVRGYGVMQGYLDDPAGTAEAIDADGWLHTGDLGTFTETGRLRIVGRKK 382
Query: 437 GRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCD 496
GG N YP E+E LL HP + V+G+ + R+ ++ A V +N +
Sbjct: 383 DMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGVPDERMGQVGKAFV---------VANAE 433
Query: 497 QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
S + L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 434 VSESD---------LLAWCRDR-MAGFKVPRT-VEFLDALPLNATGKVMKDQLR 476
>gi|171315822|ref|ZP_02905053.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171099011|gb|EDT43796.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 575
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/553 (27%), Positives = 244/553 (44%), Gaps = 72/553 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA GL +G+ GD V I + N SEW L A A IG ++ +N +
Sbjct: 60 TWREFAHEVDVLAAGLAALGIVKGDCVGIWSPNRSEWLLTQ-FATARIGAVLVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ + S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCKAVIAAERFKTSAYVEMLQTIAPELASATPGDLRAARVPSLRTVVSM 178
Query: 136 GS-SSSDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+ + D++ D L L ++ T A + I FTSGTTGSPKG ++
Sbjct: 179 SEVAPAGMFRFTDVMARGRDTLDVAQLNAIGAT--LAATDPINIQFTSGTTGSPKGATLT 236
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKS 250
H ++ + + + E D PL H G+ A +A + GA VF + F+ +
Sbjct: 237 HRNVVNNARFIAMAMRFSEQDALCIPVPLYHCFGMVLAVLACVSKGAAMVFPGEAFDPVA 296
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L AV T+L VP + +A L +++ + G P E MK +
Sbjct: 297 TLAAVADERCTALHGVPTMF--IAELDHPAFAKFDLSTLRTGIMAGSPCPIETMKRVVSQ 354
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+++ AYGMTETS P +F + T + + + + VG+ P
Sbjct: 355 MHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRIQP 394
Query: 371 HVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
H+E+K+ V G + T+G VML YWD AK + W+ TGD+ ++D
Sbjct: 395 HLEVKIVDPEGRIVPVGATGELCTKGYSVMLGYWDDD-AKTREVLVDGWMRTGDLATLDA 453
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G +VGR + GGENVYP E+E L +HP I V G+ +A+ E + A + LR
Sbjct: 454 DGYCNIVGRLKDMVIRGGENVYPREIEEYLFRHPKIQSAQVFGVPDAKYGEELCAWIVLR 513
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
Q SE + +R C + +K PR ++ + P+T TGK++
Sbjct: 514 ADEQMSEDD----------------VRAFC-TGQIAHYKIPR-YIRFVDELPMTVTGKVQ 555
Query: 546 RDEVRREVMSHLK 558
+ +R ++ LK
Sbjct: 556 KFVMRERMIEELK 568
>gi|387874232|ref|YP_006304536.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MOTT36Y]
gi|386787690|gb|AFJ33809.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. MOTT36Y]
Length = 467
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 233/536 (43%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T + V+ + A EIG+ GD VAI A NS EWI+A AF
Sbjct: 11 DAEAVVDGPLRLTFTEVVERIRCAAGAFAEIGIDKGDRVAIWAPNSA---EWIIA-AFGL 66
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ +EA I + ++ V + +L+ +TA P+ + L
Sbjct: 67 LTAGGVLVPVNTRFKTEEAGDIIVRSKVKAVFV------QKGFLDQDYTA-PAGTPVIDL 119
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + I FTSGTTG PKG +++H
Sbjct: 120 ---KSDFLSS---------------GSPFERPVSGTDISDIIFTSGTTGRPKGAMLNHGQ 161
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEA 254
+ + E D YL P H GL + + + GA + + F+ + +E
Sbjct: 162 TLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSFLRGATMLPVAVFDIDTVVEL 221
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T L P + L + K +++ + G +P EL++ P
Sbjct: 222 IDRERITMLPGPPTLYHSLLGVGDKSKL----STLRAAVTGAADIPVELVRRIHGELPFE 277
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG +F +V + G P VE+
Sbjct: 278 TLMTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GLPCDGVEV 316
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG ++ RG VM Y D A E WL TGD+GS DD G + +VGR
Sbjct: 317 RIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGWLHTGDLGSFDDAGRLRIVGR 371
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL HP + V+GI + R+ ++ A V +
Sbjct: 372 KKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERMGQVGKAFVVRKGE------- 424
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+S++ L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 425 -----------VSADELIGWCRDR-MAGFKVPRA-VQFLDSLPLNATGKVMKDQLR 467
>gi|295678131|ref|YP_003606655.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
gi|295437974|gb|ADG17144.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
Length = 576
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 262/584 (44%), Gaps = 74/584 (12%)
Query: 5 SQAHICQCLSRIAA--VKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
S+A + + L AA R +VV T +F Q+V LA GLL +G+ GD V I
Sbjct: 30 SEATVGEFLRDTAARFPDRPAVVFREQRIRWTWSEFAQEVDVLASGLLALGIAKGDRVGI 89
Query: 63 SALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWY 118
+ N +EW+L A A IG I+ +N + E A+ + ++T E S Y
Sbjct: 90 WSPNR---IEWLLTQFATARIGAILVNINPAYRLAELEYALNKVGCKAIITAERFKTSMY 146
Query: 119 LE-LQHTA---------------IPSLRWHVSL-GSSSSDFVNKRDMLTADILKGYSLRS 161
LE LQ A +P LR+ + + + + ++ D++ + R
Sbjct: 147 LEMLQELAPELATQPPGELHAARLPELRYVIRMCDTETPGMLSFSDVIERGRASFDAARL 206
Query: 162 LPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 221
+ + + I FTSGTTG+PKG ++H ++ + + GE D PL
Sbjct: 207 DAIGATLSCSEPINIQFTSGTTGNPKGATLTHRNVVNNARYIAMTMRLGEQDGLCIPVPL 266
Query: 222 CHIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRV 279
H G+ A +A + VGA VF + F+ + L A + T+L VP + +A L
Sbjct: 267 YHCFGMVLAVLACVSVGANMVFPGEGFDPAATLAATAEEKCTALHGVPTMF--IAELDHP 324
Query: 280 KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTL 339
++ + G P E MK+ + +++ AYGMTETS
Sbjct: 325 TFASYDFSRLRTGIMAGSPCPIETMKKVVSKMHLSEITIAYGMTETS------------- 371
Query: 340 ETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHV 394
P +F + T + + + + VG+ PH+E+K+ + V G + TRG V
Sbjct: 372 ------PVSFQSSTTDPLDK-RTTTVGRIQPHLEVKIVDPLGNIVPVGETGELCTRGYSV 424
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
ML YWD AK S + W+ TGD+ ++D G +VGR + GGEN+YP E+E
Sbjct: 425 MLGYWDD-EAKTRESIVDGWMHTGDLATLDAEGYCNIVGRLKDMLIRGGENIYPREIEEF 483
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L +HP I + V G+ + R E V A + LR Q + E ++Q
Sbjct: 484 LFRHPKIQSVQVFGVPDTRYGEEVCAWIVLRPGEQ----------------ATPEEIQQF 527
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
C + + +K PR ++ + P+T TGK+++ +R ++ LK
Sbjct: 528 C-QGQIAHYKVPR-YIRFVDELPMTVTGKVQKFVMRERMIGELK 569
>gi|119718156|ref|YP_925121.1| AMP-binding domain-containing protein [Nocardioides sp. JS614]
gi|119538817|gb|ABL83434.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 539
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 150/561 (26%), Positives = 244/561 (43%), Gaps = 73/561 (13%)
Query: 17 AAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWIL 75
A R ++V + R T + +DV +LARGL+ G+ GD V I A N +EW +
Sbjct: 28 AYADREALVEVASGRRWTWAELDRDVDDLARGLVAAGIGKGDRVGIWAPNCAEWTVVQ-Y 86
Query: 76 AVAFIGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTA--IPSLRW 131
A A +G I+ +N + E S A+ + +R ++ + + + ++ TA P+L
Sbjct: 87 ATAKLGIILVNVNPAYRTHEFSYAVNQSGLRLLISASTFKTSDYRAMVEETAAQTPTLER 146
Query: 132 HVSLGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
V L + + V+ L ++ ++ AP+ + I +TSGTTG PKG
Sbjct: 147 VVYLDTDDWAQLVDAGRTLPEGVVADRLAQT-------APDEPINIQYTSGTTGYPKGAT 199
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL------SSAMAMLMVGACHVFIP 244
+SH ++ ++ G +D P H G+ ++ MV + P
Sbjct: 200 LSHRNILNNGYFTTELIHLGPEDRLCIPVPFYHCFGMVMGNLGCTSHGTTMV----IPAP 255
Query: 245 KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSE 302
F+ + L + T + VP + + T+ D S++ + G P E
Sbjct: 256 GFDPEITLRTIAAERCTGVYGVPTMFIAMQN----HPTFAEHDLSSLRTGIMAGSICPVE 311
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+MK + A++ AYGMTETS ++ T D LE +
Sbjct: 312 VMKRCVDDMHMAEVAIAYGMTETSP-VSCQTRADDDLER-------------------RT 351
Query: 363 VCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
+G+ P+VE+K+ S G TRG VML YWD + W+
Sbjct: 352 ATIGRVHPYVEIKIVDPVSGETVERGRTGEFCTRGYSVMLGYWDDPEKTAEAVDADGWMH 411
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
TGD+ + + G +VGR + GGEN+YP E+E L QHP I + V+G+ + R E
Sbjct: 412 TGDLAEMREDGYCNIVGRITDMVIRGGENIYPREIEEFLYQHPDIEDVQVIGVPDERYGE 471
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
+ A VR+R + L ++ +R + L+ +K PR +VL F
Sbjct: 472 ELCAWVRMRAGAE---------------PLDADAVRAFATGR-LSHYKIPR-YVLVVDEF 514
Query: 537 PLTSTGKIRRDEVRREVMSHL 557
P+T TGKIR+ ++R E L
Sbjct: 515 PMTVTGKIRKVQMREESAKRL 535
>gi|379734139|ref|YP_005327644.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
gi|378781945|emb|CCG01599.1| short-chain acyl-CoA synthetase [Blastococcus saxobsidens DD2]
Length = 551
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 167/570 (29%), Positives = 246/570 (43%), Gaps = 81/570 (14%)
Query: 13 LSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
L R AA ++V R T Q V DV A GL +G+R GD V I A N
Sbjct: 27 LDRTAARVGDHEALVECASGRRWTYPQLVADVDACALGLDAVGVRKGDRVGIWAPNCA-- 84
Query: 71 LEWIL---AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYLELQ-H 123
EW+ A A +G I+ +N + E + + +LV+ ++SD + +
Sbjct: 85 -EWVFVQYATAKLGAILVNINPAYRTHELAYVLKQAGISVLVSAPEFKTSDYRAMVAEVR 143
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
P LR V LGS + +L +L + T A + + I +TSGTT
Sbjct: 144 GDCPDLREVVFLGSPEWE-----RLLDTGRAGDRALLAERETQLSA-DDPINIQYTSGTT 197
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACH--- 240
G PKG ++H L+ GY E D P H G M M +GA
Sbjct: 198 GFPKGATLTHHNLLNNGFFVGEGCGYTEADRVCIPVPYYHCFG----MGMGNLGATSHGA 253
Query: 241 ---VFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
+ P F+ L AV+ TSL VP + +A L S++ + G
Sbjct: 254 TMIIPAPGFDPALTLRAVQDERCTSLYGVPTMF--IAELGLPNFAEYDLSSLRTGIMAGS 311
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+MK ++ YGMTETS ++ T D LE
Sbjct: 312 PCPVEVMKRVVAEMGMTEVTICYGMTETSP-VSTQTGADDDLER---------------- 354
Query: 358 HQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTG 411
+ VG+ PH+E+KV + G TRG VML YW++ P V+
Sbjct: 355 ---RTATVGRVHPHLEVKVVDPATGLTVPRGTPGEFCTRGYSVMLGYWEE----PDVTAK 407
Query: 412 EV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
+ W+ TGD+ +D+ G + +VGR + GGENVYP E+E L HP I+ V+
Sbjct: 408 SIDSARWMHTGDLAVMDEAGYLNIVGRIKDMVIRGGENVYPREIEEFLYTHPDIVDAQVI 467
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + R E ++A VRLRE + L+++ L+++C K L +K PR
Sbjct: 468 GVPDERYGEELMAWVRLREGAE---------------PLTADALKEYCSGK-LAHYKVPR 511
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+V + FP+T TGKIR+ E+R+ + L
Sbjct: 512 -YVKVVEEFPMTVTGKIRKVEMRQVSVEEL 540
>gi|374571689|ref|ZP_09644785.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374420010|gb|EHQ99542.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 564
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 247/562 (43%), Gaps = 66/562 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAF 79
R ++V+ + T + V LA G + +GL G+ + I +LN EW L A A
Sbjct: 36 REALVSPSHGVRWTWNELAARVDALAAGFVALGLERGERIGIWSLNRPEWTLTQ-FAAAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHT-------------- 124
G I+ +N + E A+ + +VT + S Y+++ +T
Sbjct: 95 AGLILVTINPAYRLSELEFALHKVGCSAIVTATAFKTSNYMDMLNTLLPELASAKPGQLR 154
Query: 125 --AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+P+LR + +G + + + + + P S + AV I FTSGT
Sbjct: 155 AARLPALRIVIQIGGPACPGTIPFEEVAGMGGTLHREQLAPLGASLQFDDAVNIQFTSGT 214
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TGSPKGV ++H ++ + E D PL H G+ +A + +GA V
Sbjct: 215 TGSPKGVTLTHHNILNNGYFVGRAMRLTEQDRICIPVPLYHCFGMVMGNLASVTLGATMV 274
Query: 242 FIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+ + F+ + L +EQ T+L VP + +A L + + S++ + G P
Sbjct: 275 YPGEGFDPLATLRTIEQEKCTALYGVPTMF--IAELDHGEFSNFDLTSLRTGIMAGAPCP 332
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
E+MK + ++ AYGMTETS ++F + D L+
Sbjct: 333 IEVMKRVNSEMNMGEVTIAYGMTETSP-VSFQSAVDDPLDR------------------- 372
Query: 361 QGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+ VG+ PHVE+KV DG G + TRG VML YW++ V W+
Sbjct: 373 RVSTVGRIHPHVEVKVVDLDGKIVKRGERGELCTRGYSVMLGYWEEAEKTADVLDANGWM 432
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGDI IDD G +VGR + GGEN+YP E+E L +HP I + + G+A+ R
Sbjct: 433 HTGDIAIIDDQGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADTRYG 492
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E + A +R+R L+ E +R C + + K PR +V +
Sbjct: 493 EELCAWIRVRSGET----------------LTMEEVRAFC-DGQIAHNKIPR-YVEFVDA 534
Query: 536 FPLTSTGKIRRDEVRREVMSHL 557
FP+T TGKI++ +R EV L
Sbjct: 535 FPMTVTGKIQKFLMRDEVEQRL 556
>gi|357038720|ref|ZP_09100517.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355359512|gb|EHG07274.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 503
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/545 (24%), Positives = 235/545 (43%), Gaps = 70/545 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
K +++ + T ++F + + L E+G++ D VAI NS +L A+A
Sbjct: 16 KATAIICTETDTKYTYEEFNKLINRFGCALQEMGVQKEDRVAIYLPNSPEFLISHFAIAR 75
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
IG + P N + E + + + +L+ + + IP+L +++G +
Sbjct: 76 IGAVAVPFNVMFKGPEIKYILNNSKAKVLIAAAKEAALNVVEVLPGIPTLERVITVGETE 135
Query: 140 -SDFVNKRDMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ V M+ + D L+ AP V I +TSGTTG PKG +++H+
Sbjct: 136 LAGAVTFASMIESGKDELE---------MVDCAPSDTVSILYTSGTTGQPKGAMLTHNNF 186
Query: 197 IVQS-LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
+ + L ++ + D++ P CH+ + S + + GA V +F LE++
Sbjct: 187 LSNARLNGTRVLHVNDQDLFYTGTPFCHVFYVLSVLGPIYAGAGIVVSERFMPDKTLESI 246
Query: 256 EQHCVTSLITVPAIMADLATLIRVKK----TWKGRDSVKKILNGGGGLPSELMKEATNSF 311
++ VT VP + + +K +W+ S G +P E + + N+F
Sbjct: 247 SKYRVTHYAGVPTMWIYMLNEYTPEKYDVSSWRFAQS------AGASMPGEYISKIENTF 300
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+ YG TETSS+++F L G V +G PA
Sbjct: 301 -RVGFCECYGSTETSSTVSFGRL-------------GHGKVA----------SIGPPAWG 336
Query: 372 VELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+ K+ D G + VG I+ RG V YW+ A V + + W TGD+G D+
Sbjct: 337 YQFKIIGDDGKELGPNEVGEIVLRGPGVFKGYWEMPEATKEVLSEDGWFKTGDLGKYDED 396
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G ++V R+ I GG N+YP E+E VL HP + VV+G+ + E+ A ++L++
Sbjct: 397 GYYYIVDRKKDMIICGGYNIYPREIEEVLYTHPKVFEAVVIGVPDKEKGEIPKAYIKLKQ 456
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ + + Q C+E+ + +K+PR V + FP TGKI +
Sbjct: 457 GVEAEPAE----------------IVQFCKER-MAAYKSPRQ-VEFVDDFPKNPTGKILK 498
Query: 547 DEVRR 551
+R
Sbjct: 499 RVMRE 503
>gi|229137690|ref|ZP_04266295.1| Acyl-CoA synthase [Bacillus cereus BDRD-ST26]
gi|228645805|gb|EEL02034.1| Acyl-CoA synthase [Bacillus cereus BDRD-ST26]
Length = 516
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 241/533 (45%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI G + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNEASSEKVDIEIG----EMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLTKYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPN 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+ VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 353 DILP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 409
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V +++ +E++
Sbjct: 410 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV-VKKDEHITEAD 468
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 469 ----------------LETYCKESDELADYKRPRHY-LFMDELPRNASGKLQK 504
>gi|229122580|ref|ZP_04251791.1| AMP-dependent synthetase and ligase [Bacillus cereus 95/8201]
gi|228660832|gb|EEL16461.1| AMP-dependent synthetase and ligase [Bacillus cereus 95/8201]
Length = 522
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 250/535 (46%), Gaps = 60/535 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ D +A+S N + A A +G I+ P N +
Sbjct: 36 RRITYKQLKYEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 95
Query: 91 WSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
+ E + S P +L+ + E ++ E + ++ +++ S + +++
Sbjct: 96 YKSYEIEYILESSDPKLLIASGEFEKNFGFE---KVVNKVQKVITVRFSQEGYCPYEELI 152
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VG 208
+ + + H + I +TSGTTG+PKGV+++H A +VQS I +
Sbjct: 153 RTEKM------DIEPVHLNVNDDLFCILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELH 205
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ DV++ +APL HI G++ + + + +G + KF+ + L+ +EQ VT VP
Sbjct: 206 CTQKDVFIISAPLFHIFGMAINMLCAVAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVP 265
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L K S++ L G +P++ + E L ++G+TET S
Sbjct: 266 TMFIKELELEDFDKY--NLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETVS 322
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SS 382
MT YD T + NVT +GK P V +K+ + S
Sbjct: 323 --ITMTSYDDTKQ----------NVTET---------LGKAIPGVTMKIVDENRVALPSG 361
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I +G VM Y++ V + W +GD+G++D G + VGR+ I G
Sbjct: 362 EVGEIAVKGFGVMKGYYNMPEQTNQVLDNDGWYYSGDLGTLDTQGYLRFVGRKKEMIIRG 421
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
G NVYP+E+EAV+++HP +I V+G+ + L E+ A +RL+ + +E
Sbjct: 422 GLNVYPQEIEAVIMKHPKVIEAAVIGLPDKVLGEVACAVIRLKNGEESTE---------- 471
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E ++ + +EK + +K P V++ FP+T++GKI++ ++ +V S++
Sbjct: 472 ------EEIKLYLKEK-MAIYKLPEK-VIFTDEFPVTASGKIQKLRLKEQVSSNI 518
>gi|421872931|ref|ZP_16304547.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
gi|372457877|emb|CCF14096.1| AMP-binding enzyme family protein [Brevibacillus laterosporus GI-9]
Length = 553
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/533 (27%), Positives = 232/533 (43%), Gaps = 54/533 (10%)
Query: 44 NLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-T 101
LARG + +G++ G+ +AI A N EW L A A IGG++ +N + E +
Sbjct: 46 QLARGFMALGIQPGEHIAIWANNVPEWVLTQ-FATAKIGGVLVTVNTNYRTHELEYLLHQ 104
Query: 102 SIRPVMLVTDESSDSWYL----------------ELQHTAIPSLRWHVSLGSSSSDFVNK 145
S +L+ D+ Y+ ELQ +P LR + LG +
Sbjct: 105 SDATTLLLIDQFKGVSYVDMLHEICPELQTATPGELQAERLPQLRRVIYLGEERQPGMYL 164
Query: 146 RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 205
L + + + P+ V + +TSGTTG PKGV++SH+ +I ++ +
Sbjct: 165 FKDLYELAEQVTEAEQIDCQKTIHPDSVVNMQYTSGTTGFPKGVMLSHNNIINNAIQVAS 224
Query: 206 IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLI 264
++D P H G + +A + GA V I F+ K LE V + T+L
Sbjct: 225 CQNLHQEDRVCIPVPFFHCFGCVMGTLACVATGATMVPIITFQPKVVLEVVSKTRCTALY 284
Query: 265 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 324
VP + +A L S++ + G P E+MK + + AYG TE
Sbjct: 285 GVPTMF--IAELNEPTFAQYDLSSLRTGIMAGSPCPEEVMKNVVDKMGIRDITIAYGQTE 342
Query: 325 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV 384
+S +T T D ++E T H P + + P E+
Sbjct: 343 SSPVVT-QTRVDDSIE--------LRVSTVGRKHDPVEIKLMNPETGEEV-----ARGEQ 388
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 444
G + TRG VM Y+ E WL TGD+ ++D+ G + GR I GGE
Sbjct: 389 GELCTRGYQVMKGYYKMPEQTAQAIDSEGWLHTGDLATVDESGYYRITGRLKDMIIRGGE 448
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 504
N+YP E+E L H ++ + V+G+ + E V+ACV++RE E
Sbjct: 449 NIYPREIEEFLYTHLKVLDVQVIGVPDPHYGEQVLACVKVREG---------------ET 493
Query: 505 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
L S+E L++ C+ K + FK P +V +P+T++GKI++ ++R + + L
Sbjct: 494 LTSNE-LKEFCQGK-IARFKIP-YYVQIVSDYPMTASGKIQKYKLREQAIEIL 543
>gi|339008736|ref|ZP_08641309.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
gi|338774536|gb|EGP34066.1| long-chain-fatty-acid--CoA ligase [Brevibacillus laterosporus LMG
15441]
Length = 519
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 246/548 (44%), Gaps = 68/548 (12%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILAVAFI 80
N + IT + T ++ Q V AR L E G+ +G V I A NS Y+ + A+A +
Sbjct: 17 NRIAIITEEQQLTYKEMGQKVNQFARFLQQECGVDAGVRVGILAQNSLSYVLLLFAIAKL 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ-HTAIPSLRW-----HVS 134
GGI PLN R + E + + +L T +L+ ++ + W HVS
Sbjct: 77 GGIAVPLNIRLTANELTYQLEDSGTKVLFTQHEFQPVIEQLETKVSLIQIIWMDHKKHVS 136
Query: 135 LGSSSSDFVNKRDMLTADILKGYSL-RSLPFTHS-WAPEGAVIICFTSGTTGSPKGVVIS 192
G + D V + AD +L S P + + +IC+TSGTTG PKG V++
Sbjct: 137 -GEEARDRVAT--AIEADFENAINLLSSQPLIYEKMNAKAPYLICYTSGTTGRPKGAVLT 193
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSA 251
+ ++ + + D + PL HIGG+ A L G V + +F A
Sbjct: 194 QENMFWNAIHNLTSLDITSSDRSIVLLPLFHIGGIGLFAFPTLFAGGSIVIVGRFHPDKA 253
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL-MKEAT 308
LE ++Q+ VT ++ VPAI L R + + D SV+ NGG P EL +
Sbjct: 254 LEMIQQYQVTIVMGVPAIHDAL----RRSQLFSTTDLSSVRWFYNGGAPCPHELILYYQD 309
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
P + +G+TETS ++ ++ D + +GKP
Sbjct: 310 RGLPFGQ---GFGLTETSPTVCMLSAEDARHKVG---------------------SIGKP 345
Query: 369 APHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
E+++ + + VG + +G HVM YW+ + + + W TGD+
Sbjct: 346 VLFCEIRLVDEHDQEVPNGEVGELAIKGPHVMKEYWN-LPNETAKAMRNGWFYTGDLARR 404
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G +++ GRR I SGGEN+YP EVE + P + + VVG+A+ + E+ A V
Sbjct: 405 DEEGFLYIAGRRKEMIISGGENIYPLEVEQAIGSLPEVAEVAVVGVADEKWGEVAKAFVV 464
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
++ES L+ E+LRQ C+ K + +K P+ FV + P +TGK
Sbjct: 465 IKES----------------ATLTEEILRQACQMK-IAKYKIPKYFVFLAE-LPRNATGK 506
Query: 544 IRRDEVRR 551
I + ++R
Sbjct: 507 INKTALQR 514
>gi|333905277|ref|YP_004479148.1| fatty-acid CoA ligase [Streptococcus parauberis KCTC 11537]
gi|333120542|gb|AEF25476.1| fatty-acid CoA ligase [Streptococcus parauberis KCTC 11537]
gi|456371237|gb|EMF50133.1| Long-chain-fatty-acid--CoA ligase [Streptococcus parauberis
KRS-02109]
Length = 500
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/543 (27%), Positives = 232/543 (42%), Gaps = 82/543 (15%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGG 82
+V+ R T Q Q +NLA LL+ + GD VA+ A N Y + + A IG
Sbjct: 18 AVIDPLKERQWTYGQLHQRAINLAHYLLKRNISKGDRVALFAPNDVAYYDLLFACTKIGA 77
Query: 83 IVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDF 142
I+ PLN+R E + + P ++ Y E I S+
Sbjct: 78 IMVPLNWRLKSIEIEKIVKDCSPKFVL--------YAEHHKDRIESI------------- 116
Query: 143 VNKRDMLTADILKGYSLRSLPFTHSWAPE------GAVIICFTSGTTGSPKGVVISHSAL 196
++DML D ++ S P + PE I +TSG+TG PKGV+ISH+ +
Sbjct: 117 FAEKDMLDIDSQDYDAIFSKPISEDL-PELHIDKYSPAFIMYTSGSTGMPKGVMISHNGM 175
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAV 255
I +L IA + +D L +AP+ HI A+ ++ G V F A++ +
Sbjct: 176 IQNALNGIASWNFVANDSTLVSAPMFHIAAFGGFAIPFIVNGLTVVLQRYFNPLEAIQLI 235
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA- 314
E + +T L VP + L T K SVK +++GG + + K SF K
Sbjct: 236 ENYKITHLFMVPTMYYTLLTHDSFDS--KALSSVKVMISGGAPASNFVQK----SFEKFG 289
Query: 315 -KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+I++YG+TE P F + P+ +GKP V
Sbjct: 290 HNIINSYGLTEVG-------------------PNNFRILASEVADHPK--SIGKPLMFVG 328
Query: 374 LKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
++ + +G +L G HV YW+ S G+ + TGD+ D+ G
Sbjct: 329 ARIVDENFQDVKQGEIGELLLSGQHVFRGYWENSAETEKASYGKFFC-TGDLAKQDEDGF 387
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
++V R+ I +GGENV P EVE VL +P + VV+G N E V A + L
Sbjct: 388 YYIVNRKKELIITGGENVLPSEVETVLNNYPIVRDSVVLGYDNPEFGESVGAAIIL---- 443
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
N D KE + ++C E +L G+K P+ ++L + FP + GKI +
Sbjct: 444 -----NADCPDYEKE-------ITRYCLE-HLAGYKVPKAYLLLDE-FPRNAIGKIDKLA 489
Query: 549 VRR 551
+++
Sbjct: 490 IQK 492
>gi|312111428|ref|YP_003989744.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|311216529|gb|ADP75133.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
Length = 518
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 249/554 (44%), Gaps = 80/554 (14%)
Query: 18 AVKR--NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL 75
AV+R N V + G+R T +QF ++V +A L IG++ D V I N +
Sbjct: 10 AVERFPNRVAVVEGDRRYTYRQFHKEVTKVAASLQRIGIKQHDRVMILLKNRLENMVIYW 69
Query: 76 AVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
A+ IG + P+N+R + KE + +V + +S L+ P L + +
Sbjct: 70 ALQKIGAVYTPINFRLAVKEVEYCVNDAEATAVVYESASQESVLKANFQQKPIL---IGV 126
Query: 136 GSSSSDFVNKRDMLTADIL-KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
G V D+ +++ + P H+ + I+ +TSGTTG PKGV +H
Sbjct: 127 GE-----VEGADIYYNELVDRSPESFEKPVIHA---DDVAIMLYTSGTTGKPKGVPRTHK 178
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEA 254
+LA I Y + L T PL H G+ S ++++ + +V +P F++K ALE
Sbjct: 179 NEYSAALAHIIQNQYQGGESTLGTMPLYHTMGMRSLLSIMFLNGKYVILPDFDAKEALEL 238
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+E+ +T+L VP + D+ + + D +KKI G + + L ++
Sbjct: 239 LEREEITALYLVPTLYHDILN----HEEFHNYDLSKLKKIGYAGAPMTTALAEKCVQMLK 294
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
I+ YG TE TF + PN +P C GKP H
Sbjct: 295 PEVFINHYGSTEI---YTF-------------------TINPNVAEKPG--CAGKPGLHQ 330
Query: 373 ELKVCS---DGSSHVGRILTRG--AHVMLR---------YWDQFLA-KPSVSTGEVWLDT 417
+++ +G S I+ +G +++ YW++ A K ++ G W T
Sbjct: 331 NIRLVKADPNGQSTPEDIVEKGEIGEIIVNIESPESFKGYWNRPDATKKAIRDG--WYFT 388
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G +D+ G++++VGR + I SGGEN++P EVE VL +HP + + V+G + R ++
Sbjct: 389 GDLGMLDEDGDLYVVGRIDDMIISGGENIHPIEVEDVLSKHPKVQEVAVIGEEDERWGQI 448
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK-NLTGFKAPRLFVLWRKPF 536
V A V K+ L+ + L +C+ L+ FK PR +V K
Sbjct: 449 VAAYV-----------------VPKDPSLTCQELDHYCKNNTTLSNFKRPRKYVFI-KEI 490
Query: 537 PLTSTGKIRRDEVR 550
P + GKI R +R
Sbjct: 491 PKSPVGKILRRNIR 504
>gi|170722114|ref|YP_001749802.1| acyl-CoA synthetase [Pseudomonas putida W619]
gi|169760117|gb|ACA73433.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 557
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 248/557 (44%), Gaps = 73/557 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLN--YR 90
T QQ V AR L+ +G++ G+ V I A N +EW + A A +G I+ +N YR
Sbjct: 47 TWQQLADAVDRHARALMVLGVQPGERVGIWAPNCAEWCITQ-FASAKVGAILVNINPAYR 105
Query: 91 WSFKEASRAITSIRPVML---------------VTDESSDSWYLELQHTAIPSLRWHVSL 135
+ E + + R V+ + E ++S L P LR VSL
Sbjct: 106 ATELEYALGQSGCRWVICADAFKTCDYHAMLLGLIPELANSQPGALACERFPELRGVVSL 165
Query: 136 G-SSSSDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ S + D+ AD + +L P + I +TSGTTG PKG +SH
Sbjct: 166 AIAPPSGLLAWHDLQARADAVSAQALAER--QAQLQPGDPINIQYTSGTTGFPKGATLSH 223
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
+ ++ +G E D + PL H G+ A M + P F+ +
Sbjct: 224 NNVLNNGYMVGESLGLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSTLIYPNDAFDPLAT 283
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV + T+L VP + +A L ++ S++ + G P E+M+ +
Sbjct: 284 LRAVAEEKATALYGVPTMF--IAELDHPQRGAFDLSSLRTGIMAGATCPIEVMRRVIDEM 341
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
A++ AYGMTETS ++ T + LE VT VG+ P
Sbjct: 342 HMAQVQIAYGMTETSP-VSLQTGANDDLER---------RVT----------SVGRTQPR 381
Query: 372 VELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E KV +DG++ +G + TRG +VML YW+ A GE W+ TGD+ +D+
Sbjct: 382 LESKVIDADGNTVPRGDIGELCTRGYNVMLGYWNNPEATAESIDGEGWMHTGDLAVMDEQ 441
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V +VGR I GGEN+YP E+E HP + + V+G+ ++ E +VA VRL
Sbjct: 442 GYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHP 501
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
Q ++S+ LR+ R + + FK PR F + FP+T TGK+++
Sbjct: 502 GHQ----------------VASDELREWARAR-IAHFKVPRYFRFVDE-FPMTVTGKVQK 543
Query: 547 DEVRREVMSHLKSLPSN 563
+R ++SLP
Sbjct: 544 FRMRE---ISIESLPEQ 557
>gi|407707378|ref|YP_006830963.1| hypothetical protein MC28_4142 [Bacillus thuringiensis MC28]
gi|407385063|gb|AFU15564.1| 2-succinylbenzoate--CoA ligase [Bacillus thuringiensis MC28]
Length = 482
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 250/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ G VA+ N + I A++++G + LN R S
Sbjct: 30 TFMQLHEKVVSVCERLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 89
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + + S ++ A I
Sbjct: 90 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSFAEVMNGSKAE---------ASI 133
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ +SL E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 134 QEEFSL-----------EEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDD 182
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 183 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 242
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 243 --LERLGEETYP--SSLRCMLLGGGPAPKPLLETCVKK--GIPVYQTYGMTETSSQICTL 296
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 297 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 335
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 336 VKGPNVTGGYFNREDATRETIQNG--WLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 393
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+A+ ESW Q + +S + +
Sbjct: 394 PAQIEEVLLSHPAVAEAGVVGMAD--------------ESWGQVPAAFVVKSGE-----V 434
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E L C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 435 TEEELLHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 479
>gi|423620483|ref|ZP_17596294.1| hypothetical protein IIO_05786 [Bacillus cereus VD115]
gi|401247849|gb|EJR54176.1| hypothetical protein IIO_05786 [Bacillus cereus VD115]
Length = 518
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/533 (25%), Positives = 239/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAMIERDFPNTSFWYVEDDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSEKVDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ + S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLSQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+ VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DILP--PYEVGEIILRGPTMMAGYHNREEAN-TKSLYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 412 VDDMVISGGVNIYPREIEDYLHSHPGILDVAVLGEPDELWGERVVAVIV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L ++C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 ------KKDETITEADLEKYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|217958475|ref|YP_002337023.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus AH187]
gi|375282966|ref|YP_005103404.1| AMP-binding protein [Bacillus cereus NC7401]
gi|423354504|ref|ZP_17332130.1| hypothetical protein IAU_02579 [Bacillus cereus IS075]
gi|423570070|ref|ZP_17546316.1| hypothetical protein II7_03292 [Bacillus cereus MSX-A12]
gi|217066404|gb|ACJ80654.1| acyl-CoA synthase [Bacillus cereus AH187]
gi|358351492|dbj|BAL16664.1| AMP-binding protein [Bacillus cereus NC7401]
gi|401086820|gb|EJP95040.1| hypothetical protein IAU_02579 [Bacillus cereus IS075]
gi|401204632|gb|EJR11445.1| hypothetical protein II7_03292 [Bacillus cereus MSX-A12]
Length = 518
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 243/538 (45%), Gaps = 52/538 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI G + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVDIEIG----EMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTM---WNMLLQKDLTKYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPN 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+ VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DILP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V +++ +E++
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV-VKKDEHITEAD 470
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 471 ----------------LETYCKESDELADYKRPRHY-LFMDELPRNASGKLQKFVLRE 511
>gi|333989012|ref|YP_004521626.1| fatty-acid--CoA ligase [Mycobacterium sp. JDM601]
gi|333484980|gb|AEF34372.1| fatty-acid-CoA ligase [Mycobacterium sp. JDM601]
Length = 464
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 219/509 (43%), Gaps = 68/509 (13%)
Query: 53 GLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE 112
G+R GD V LN +L + A A IG PLN+R + E + L+ D
Sbjct: 4 GMRRGDRVGYVGLNHPDFLVTLFAAARIGAAFVPLNWRLTADELRYILGDAGVHTLLADA 63
Query: 113 SSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEG 172
+ T I +R L + + + +L G + + P P+
Sbjct: 64 E--------RATVIDPIRAESGLRRAIALTAVPGWEVADALLAGRAPLADPVFPE--PDD 113
Query: 173 AVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAM 231
+I +TSGTTG PKG +++H+ L ++ + + DV L APL HIGGL+ + +
Sbjct: 114 IAVIMYTSGTTGRPKGAMLTHANLFWNNINALLSFDTSQQDVSLVCAPLFHIGGLNVTTL 173
Query: 232 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
L G V +P F+ AL+ + +H VT++ VPA+ +A L + SV+
Sbjct: 174 LTLQKGGRIVLMPAFDPVEALKLIAEHRVTTMFGVPAMFLFMAQLPQFAAA--DLSSVRY 231
Query: 292 ILNGGGGLPSELM-KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFG 350
+ GG +P L+ + P A+ YG+TET+ + L T E ++ A
Sbjct: 232 FVCGGAPVPEALIHRYGERDIPFAQ---GYGLTETAP----LALVLRTDEVGVKIGAAGN 284
Query: 351 NVTP---------NSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQ 401
V P N+V P G G I RG VM YW
Sbjct: 285 QVLPLSDVRLVDANNVPVPAGTR--------------------GEICVRGPQVMAGYWRN 324
Query: 402 FLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGI 461
A +V + W TGDIG DD G +W++ R + SGGENVYP EVE VL HP +
Sbjct: 325 PEATAAVIDAQGWFHTGDIGQADDEGYIWVIDRVKDMVISGGENVYPAEVEDVLYGHPAV 384
Query: 462 IGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLT 521
+ V+G + + E V A V LR L+ + LR R+K L
Sbjct: 385 AEVAVLGTPHEKWGEAVTAVVALRPGAT----------------LALDELRAFARDK-LA 427
Query: 522 GFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
FK P + + + P T +GK+ + ++R
Sbjct: 428 AFKLP-IRLEFVDALPRTQSGKVVKYQLR 455
>gi|229161918|ref|ZP_04289895.1| AMP-dependent synthetase and ligase [Bacillus cereus R309803]
gi|228621525|gb|EEK78374.1| AMP-dependent synthetase and ligase [Bacillus cereus R309803]
Length = 522
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 249/536 (46%), Gaps = 60/536 (11%)
Query: 30 NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNY 89
R T +Q +V LA +G+ D +A+S N + A A +G I+ P N
Sbjct: 35 TRRITYKQLKYEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNP 94
Query: 90 RWSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDM 148
++ E + S P +L+ + E ++ E + + +++ S ++ ++
Sbjct: 95 KYKSYEIEYILESSAPKLLIASGEFEKNFGFE---KVVNKVEKVITVRFSQENYCPYEEL 151
Query: 149 LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-V 207
+ + + H + I +TSGTTG+PKGV+++H A +VQS I +
Sbjct: 152 IRTEKM------DFEPVHISVNDDLFCILYTSGTTGTPKGVMVTHRA-VVQSARTIGTEL 204
Query: 208 GYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITV 266
+ DV++ +APL HI G++ + + + +G + KF + L+ +EQ VT V
Sbjct: 205 HCTQKDVFIISAPLFHIFGMAINMLCAVAMGGRIILQEKFHPRETLQLIEQEKVTIQKGV 264
Query: 267 PAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
P + L K S++ L G +P++ + E L ++G+TET
Sbjct: 265 PTMFIKELELEDFDKY--DLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETV 321
Query: 327 SSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS----- 381
S MT YD T + N+T +GK P V LK+ D
Sbjct: 322 S--ITMTSYDDTKQ----------NITET---------LGKAIPGVTLKIVDDNRVALPP 360
Query: 382 SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKS 441
VG I +G VM Y++ V E W +GD+G++D G + VGR+ I
Sbjct: 361 GEVGEIAVKGFGVMKGYYNMPEQTNQVLDNEDWYYSGDLGTLDFQGYLRFVGRKKEMIIR 420
Query: 442 GGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKN 501
GG NVYP+E+EAV+++HP +I V+G+ + L E+ A +RL KN
Sbjct: 421 GGLNVYPQEIEAVIMKHPKVIEAAVIGLPDKVLGEVACAVIRL---------------KN 465
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E+ E+ + + +E+ + +K P V++ + FP+T++GKI++ ++R +V +++
Sbjct: 466 GEISTEEEI-KIYLKER-MAIYKLPEK-VIFTEDFPVTASGKIQKLKLREQVSTNI 518
>gi|149180898|ref|ZP_01859400.1| long-chain fatty-acid-CoA ligase [Bacillus sp. SG-1]
gi|148851417|gb|EDL65565.1| long-chain fatty-acid-CoA ligase [Bacillus sp. SG-1]
Length = 507
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 242/539 (44%), Gaps = 87/539 (16%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +QF ++V LA GLL +G+ G+ +A+ NS+ ++ A A IG ++ P+N+R +
Sbjct: 28 TYKQFNEEVNKLAHGLLNLGVHKGEKIALMMKNSDQFVLSFFAGAKIGAVIVPVNFRLTA 87
Query: 94 KEASRAITSIRPVMLVTDESSD---------SWYLELQHTAIPSLRWHVSLGSSSSDFVN 144
E + + V+++ DE + + L + T P + H + +D
Sbjct: 88 TEVHYILDQSQSVVVICDEEFEEVVTSAREGTGVLHVITTGTPKVVGHHTFERVMADNTA 147
Query: 145 KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 204
+ + D + + I +TSGTTG PKG + H + L +
Sbjct: 148 EPSVEVND------------------DDDLEILYTSGTTGRPKGALFDHKRVFNVGLTMM 189
Query: 205 AIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSL 263
+G E++ +LH APL H L+ + + +++GA H+ F ++L+A++++ +T
Sbjct: 190 ISMGINEEERFLHIAPLFHSAQLNLFLISGVVLGATHIIHRDFHPVTSLQAIQENKITHF 249
Query: 264 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VPA+ L + S+K+ G + E+++ + F + + G+T
Sbjct: 250 FGVPAMYNFLLQVPNAADY--DLSSIKRCGYGAAPMAPEVVRRSMELFKTDQFYNLCGLT 307
Query: 324 ETSSSLTFMTLYDPTLETPGQL---PQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 380
E PG + PQ + H +G GK A E +V ++
Sbjct: 308 EAG---------------PGGILLDPQG------HKTHFGKG---GKAAFLTEARVVNEE 343
Query: 381 SSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLV 432
VG + +G +M Y+ KP + + WL TGD+ +ID+ G + LV
Sbjct: 344 GKDIEPGAVGEFIIKGESIMKEYY----RKPEETAKTIKDGWLYTGDLATIDEEGYITLV 399
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R+ I SGGENVY EVE VL +HP ++ ++G+ + E V A + + Q +E
Sbjct: 400 DRKKDMIISGGENVYSIEVEDVLYEHPAVLEAAIIGLPDETWGEAVCAVIVPK---QGAE 456
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
N D+ L+ CR+K L G+K PR + + P ++GKI + ++R+
Sbjct: 457 INEDE-------------LKSFCRQK-LAGYKIPRRMFI-EEALPRNASGKILKYQLRQ 500
>gi|228932289|ref|ZP_04095172.1| Acyl-CoA synthase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827357|gb|EEM73108.1| Acyl-CoA synthase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 516
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 240/538 (44%), Gaps = 52/538 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W+V S
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNASFWYVEDDTPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNAASSKKIDI----EINEMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPSEDAPAEPN 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+ VG I+ RG +M Y ++ A S + W +GD+G D G +++ R
Sbjct: 353 DILP--PYEVGEIILRGPTMMAGYHNREEANAK-SMYKGWYHSGDLGYFDKDGYLFVADR 409
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 410 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV------------ 457
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K E + ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 458 ----VKKDETITEAD-LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 509
>gi|206975614|ref|ZP_03236526.1| acyl-CoA synthetase [Bacillus cereus H3081.97]
gi|206746076|gb|EDZ57471.1| acyl-CoA synthetase [Bacillus cereus H3081.97]
Length = 518
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 239/538 (44%), Gaps = 52/538 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWNEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSKKIDI----EINEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPSEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVVV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K+ ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 461 ------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 511
>gi|443304175|ref|ZP_21033963.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. H4Y]
gi|442765739|gb|ELR83733.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. H4Y]
Length = 479
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 234/536 (43%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T Q V+ + A ++G+ GD VAI A NS EWI+A AF
Sbjct: 23 DAEAVVDGPLRLTFTQVVERIRCAAGAFADLGVDKGDRVAIWAPNSA---EWIIA-AFGL 78
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ +EA I + ++ V++ +L+ +TA P+ V +
Sbjct: 79 LTAGGVLVPVNTRFKTEEAGDIIVRSKVKAVLV------QKGFLDQDYTA-PA---GVPV 128
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + I FTSGTTG PKG +++H
Sbjct: 129 IDLKSDFLSS---------------GSPFERPVSGTDTSDIIFTSGTTGRPKGAMLNHGQ 173
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEA 254
+ + E D YL P H GL + + + GA + + F+ + +E
Sbjct: 174 TLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSFLRGATMLPVAVFDIDTVVEL 233
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T L P + L + K +++ + G +P EL++ P
Sbjct: 234 IDRERITMLPGPPTLYHSLLGVGDKSKL----STLRAAVTGAADIPVELVRRIHGELPFE 289
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG +F +V + G P VE+
Sbjct: 290 TLMTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GLPCDGVEV 328
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG ++ RG VM Y D A E WL TGD+GS DD G + +VGR
Sbjct: 329 RIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGWLHTGDLGSFDDAGRLRIVGR 383
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL HP + V+GI + R+ ++ A V +
Sbjct: 384 KKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERMGQVGKAFVVRKGE------- 436
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+S++ L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 437 -----------VSADELIAWCRDR-MAGFKVPRA-VQFLDSLPLNATGKVMKDQLR 479
>gi|229101629|ref|ZP_04232351.1| Acyl-CoA synthase [Bacillus cereus Rock3-28]
gi|229114456|ref|ZP_04243873.1| Acyl-CoA synthase [Bacillus cereus Rock1-3]
gi|228668998|gb|EEL24423.1| Acyl-CoA synthase [Bacillus cereus Rock1-3]
gi|228681790|gb|EEL35945.1| Acyl-CoA synthase [Bacillus cereus Rock3-28]
Length = 516
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 239/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDCVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W+V S
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAMIERDFPNTSFWYVEDDKPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNAASSEKVDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ + S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLSQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 353 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-TKSLYKGWYHSGDLGYFDKDGYLFVADR 409
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 410 VDDMVISGGVNIYPREIEDYLHSHPGILDVAVLGEPDELWGERVVAVIV----------- 458
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L ++C+E + L +K PR + L+ P ++GK+++
Sbjct: 459 ------KKDEAITEADLEKYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 504
>gi|56419850|ref|YP_147168.1| long-chain-fatty-acid--CoA ligase [Geobacillus kaustophilus HTA426]
gi|375008294|ref|YP_004981927.1| Long-chain-fatty-acid-CoA ligase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|56379692|dbj|BAD75600.1| fatty acid-CoA ligase [Geobacillus kaustophilus HTA426]
gi|359287143|gb|AEV18827.1| Long-chain-fatty-acid-CoA ligase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 522
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 248/541 (45%), Gaps = 54/541 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV R T ++ ++V A LE G+R GD V+ N+ + A A I
Sbjct: 17 REAVVDAATGRRYTYAEWEREVNRWANAFLEAGVRKGDRVSTVLYNTLELATALFACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G + P+N+R +E + +T P +++ + + +E + AI S HVS S
Sbjct: 77 GAVFNPINFRLRAEEIAYILTDAEPKIVLFERA-----VEPELAAIHSRFPHVSFWSIDR 131
Query: 141 D---FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D F A +L P H + I+ +TSGTTG PKGV+ H +I
Sbjct: 132 DPPPFAK-----NAHEQAARALGEAPRVHVDESDLYAIM-YTSGTTGRPKGVMHRHRDMI 185
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
QS+ ++ E D L APL H L + + GA V + F++K LE +E
Sbjct: 186 EQSVICHGVMRIRETDRGLAAAPLFHCAELHCCLLPRVHAGAASVILHHFDAKLVLETIE 245
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKA 314
+ +T + P + + +++ G D S++ L G + L+++
Sbjct: 246 RERITIMFGAPTMWNMI-----LQENVSGYDLSSLRLGLYGAAPMAPALVRQCQEQL-GI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+LI AYGMTE ++TF+ L D L+ G +A N H+ + V + P
Sbjct: 300 ELIQAYGMTEMGPAVTFL-LEDEQLKKAGSAGRACLN------HEIRVVRAREDGPSDPD 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y+ + A + ++ G W +GD+G +D+ G +++
Sbjct: 353 DVLP--PYEVGEIVMRGPCMMAGYYKREEATEKALYKG--WYHSGDLGYLDEDGYLYVAD 408
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGGENVYP EVE VL +HP ++ + V+G + E VVA V
Sbjct: 409 RVDDMVISGGENVYPREVEDVLYEHPKVLDVAVLGEPDELWGEKVVAFV----------- 457
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K+ LL+++ L Q C+ + L +K PR + P ++GKI++ +R +
Sbjct: 458 ------VKKDDLLTADELEQFCKTSDRLAPYKRPRAYYFI-DALPRNASGKIQKFLLREQ 510
Query: 553 V 553
+
Sbjct: 511 L 511
>gi|316931557|ref|YP_004106539.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
gi|315599271|gb|ADU41806.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
Length = 564
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 163/579 (28%), Positives = 252/579 (43%), Gaps = 74/579 (12%)
Query: 9 ICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
I Q L R A + R ++V+ + + T ++F V LA G + +GL G + I ++N
Sbjct: 22 IGQALDRAATLWPDREALVSPSHDTRWTWREFAARVDALAAGFVALGLERGARIGIWSMN 81
Query: 67 -SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE---- 120
EW L A A G I+ +N + E A+ + LVT + S Y+E
Sbjct: 82 RPEWTLTQ-FAAAKAGLILVTINPAYRLSELEFALAKVGCAALVTATAFKTSHYMEMLNT 140
Query: 121 ------------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 168
LQ +P LR + +G D + + + F
Sbjct: 141 LIPELATSSPGALQSAKLPKLRTVIQIGGPKCPGTIAFDEVATMGGARHRDQIAAFASEL 200
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
+ AV I FTSGTTGSPKGV ++H ++ + E D PL H G+
Sbjct: 201 QFDDAVNIQFTSGTTGSPKGVTLTHHNILNNGYFVGRAMKLTEVDRICIPVPLYHCFGMV 260
Query: 229 SA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
+A + GA V+ + F+ L+ + T+L VP + +A L +
Sbjct: 261 MGNLASVTCGAAMVYPGEGFDPLVTLQTASREKCTALYGVPTMF--IAELDHPEFAGFDL 318
Query: 287 DSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLP 346
S++ + G P E+M+ ++ ++ AYGMTETS P
Sbjct: 319 SSLRTGIMAGAPCPVEVMRRVNDAMNMREVTIAYGMTETS-------------------P 359
Query: 347 QAFGNVTPNSVHQPQG---VCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRY 398
+F ++V P+ VG+ PHVE+KV DG G + TRG VML Y
Sbjct: 360 VSF----QSAVDDPEDRRVSTVGRIHPHVEVKVVDLDGKIVPRGTRGELCTRGYSVMLGY 415
Query: 399 WDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQH 458
WD+ V W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +H
Sbjct: 416 WDEPEKTADVLDAAGWMHTGDLATIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRH 475
Query: 459 PGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREK 518
P I + + G+A+ R E + A VR R ES L+++ +R C +
Sbjct: 476 PKIQDVQIFGVADDRYGEELCAWVRPRP----GES------------LTADDVRAFC-QG 518
Query: 519 NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ K PR ++ + FP+T TGKI++ +R +V + L
Sbjct: 519 QIAHNKIPR-YIEFVDEFPMTVTGKIQKFIMREKVEAKL 556
>gi|126438681|ref|YP_001060959.1| AMP-binding protein [Burkholderia pseudomallei 668]
gi|126218174|gb|ABN81680.1| AMP-binding domain protein [Burkholderia pseudomallei 668]
Length = 576
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 151/551 (27%), Positives = 245/551 (44%), Gaps = 69/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA L+++G+ GD V I + N +EW L A A IG ++ +N +
Sbjct: 60 TWREFADEVDALAAALIQLGIARGDRVGIWSPNRAEWLLTQ-FATARIGAVLVNVNPAYR 118
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE-----------------LQHTAIPSLRWHVS 134
E A+ + +L+ E S Y E L +PSLR V+
Sbjct: 119 LAELEYALNKVGCKLLIAAERFKTSAYAEMIAEIAPELATTRAGDVLCAARVPSLRTVVT 178
Query: 135 LGSSS-SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ ++ + ++ D+L S R + + I FTSGTTGSPKG ++H
Sbjct: 179 MSDAAHAGMLSFADVLARGRAALASARLDAIGATLDCRDPINIQFTSGTTGSPKGATLTH 238
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSA 251
++ + + ++ E D PL H G+ S +A + GA VF FE +
Sbjct: 239 RNVVNNARSIANVMRLTEADAMCIPVPLYHCFGMVLSVLACVSAGAKMVFPGAAFEPGAT 298
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L AV T+L VP + +A L +++ + G P E MK
Sbjct: 299 LAAVSDERCTALQGVPTMF--IAELDHPDFDRFDLSTLRTGIMAGSPCPIETMKRVVAKM 356
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYGMTETS P +F + T +S+ + + VG+ PH
Sbjct: 357 HMSEVTIAYGMTETS-------------------PVSFQSATTDSLEK-RTTTVGRIQPH 396
Query: 372 VELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+E K+ + V G + TRG VML YWD A+ + + W+ TGD+ ++D+
Sbjct: 397 LEAKIVDATGAIVPVGETGELCTRGYSVMLGYWDD-EARTREAVVDGWMRTGDLATLDEE 455
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G +VGR + GGENVYP E+E L +HP I + V G+ +++ E V A + LR
Sbjct: 456 GFCNIVGRLKDMLIRGGENVYPREIEEFLFRHPKIQSVQVFGVPDSKYGEEVCAWIVLRA 515
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ + LR+ C + +K PR +V + P+T TGK+++
Sbjct: 516 GET----------------MTDDELREFC-SGQIAHYKVPR-YVRFVDELPMTVTGKVQK 557
Query: 547 DEVRREVMSHL 557
+R ++ L
Sbjct: 558 FVMRERMIDGL 568
>gi|146295968|ref|YP_001179739.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409544|gb|ABP66548.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 553
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 239/553 (43%), Gaps = 74/553 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +QF + V + A+G L IG++ G+ VA+ A N YL I A++ IG ++ +N +
Sbjct: 35 TYKQFKKIVEDAAKGFLAIGIQKGEHVAVWATNKLEYLVSIFALSKIGAVLVTVNTNYKI 94
Query: 94 KEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLG 136
E + L+ E DS YLE L++ +P L+ + +G
Sbjct: 95 YELEYLLKQSDSSTLIFIEGFKDSNYLEIIKKLNPQLENCEKGKLENPNLPYLKRLIFIG 154
Query: 137 SSSSDFVNKRDMLT----ADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ S R M T D+ + S L S P+ + + +TSGTTG PKGV++
Sbjct: 155 NESH-----RGMYTWNEVVDLSRRVSDADLYQRQKSLQPDEVINMQYTSGTTGFPKGVML 209
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKS 250
+H ++ A + +D P H GL + A + GA V + F
Sbjct: 210 THKNILNNGYAIAECMKLTHNDKLCIPVPFFHCFGLVLGITACVAKGATMVPLDHFNPLM 269
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
+E V T+L VP + +A L S++ + G P ++M+E
Sbjct: 270 VMETVHYERCTALHGVPTMF--IAILQHPDFNKFDFSSLRTGIMAGAPCPIKVMREVVEK 327
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ AYG TE S +T + DP + + VG+P
Sbjct: 328 MNMKEITIAYGQTEASPVITQTRIDDPL--------------------EFRVSTVGRPLE 367
Query: 371 HVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
VE+K+ + +G I RG ++M Y+ A + WL TGD+G ID
Sbjct: 368 GVEVKIVDINTKEEVPNGTIGEICARGYNIMKGYYKMPEATKQAIDEDGWLHTGDLGYID 427
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G + + GR I GGEN+YP E+E L HP I + VVG+ + E ++A V L
Sbjct: 428 QNGYLRITGRLKDMIIRGGENIYPREIEEFLYTHPAIKDVQVVGVPDKVYGEEIMAFVIL 487
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
++ +E E ++++ R+ NL+ K P+ +V++ FP T+ GK+
Sbjct: 488 KDGASVTE----------------EEIKEYVRQ-NLSRHKTPK-YVMFVDSFPTTANGKV 529
Query: 545 RRDEVRREVMSHL 557
++ ++R + L
Sbjct: 530 QKYKLREMAIEML 542
>gi|406029174|ref|YP_006728065.1| acyl-CoA synthetase family member 2 [Mycobacterium indicus pranii
MTCC 9506]
gi|405127721|gb|AFS12976.1| Acyl-CoA synthetase family member 2 [Mycobacterium indicus pranii
MTCC 9506]
Length = 467
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 235/536 (43%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T + V+ + A ++G+ GD VAI A NS EWI+A AF
Sbjct: 11 DAEAVVDGPLRLTFTEVVERIRCAAGAFAKLGIDKGDRVAIWAPNSA---EWIIA-AFGL 66
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ +EA I + ++ V++ +L+ +TA P+ + L
Sbjct: 67 LTAGGVLVPVNTRFKTEEAGDIIVRSKVKAVLV------QKGFLDQDYTA-PAGTPVIDL 119
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + I FTSGTTG PKG +++H
Sbjct: 120 ---KSDFLSS---------------GSPFERPVSGTDISDIIFTSGTTGRPKGAMLNHGQ 161
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEA 254
+ + E D YL P H GL + + + GA + + F+ + +E
Sbjct: 162 TLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSFLRGATMLPVAVFDIDTVVEL 221
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ +T L P + L ++ K +++ + G +P EL++ P
Sbjct: 222 IERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAVTGAADIPVELVRRIHGELPFE 277
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG +F +V + G P VE+
Sbjct: 278 TLMTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GLPCDGVEV 316
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG ++ RG VM Y D A E WL TGD+GS DD G + +VGR
Sbjct: 317 RIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGWLHTGDLGSFDDAGRLRIVGR 371
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL HP + V+GI + R+ ++ A V +
Sbjct: 372 KKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERMGQVGKAFVVRKGE------- 424
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+S++ L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 425 -----------VSADELIGWCRDR-MAGFKVPRA-VQFLDSLPLNATGKVMKDQLR 467
>gi|392534955|ref|ZP_10282092.1| AMP-binding domain protein [Pseudoalteromonas arctica A 37-1-2]
Length = 577
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/551 (25%), Positives = 244/551 (44%), Gaps = 70/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++V LA GLL +G++ G+ V I S N EW L A A IG I+ +N +
Sbjct: 64 TYKEFQKEVNQLAMGLLALGVKPGERVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYR 122
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ S+ L+T + S YLE L A+P+L+ + +
Sbjct: 123 PNELQYALNSVECSTLITASNFKGSDYLEMLNGLAPELATCNKDTLNLKALPTLKNIIRI 182
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G +S + + + + L + E + I FTSGTTG+PKG ++H
Sbjct: 183 GDEASPGMYSFNDVINLPTSAHELELKAIGANLNAEQDINIQFTSGTTGNPKGATLTHKN 242
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALE 253
++ +L + + DD PL H + + + P F++K+ L+
Sbjct: 243 ILNNALFVAESMHFTSDDKLCIPIPLYHCFAMVLGSLLCVSKGAAAIYPGDSFDAKTTLD 302
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSF 311
V+Q T+L VP + L + D +++ + G P ++M++
Sbjct: 303 VVQQEGCTALHGVPTMFISELEL----SNFNDYDLSTLRTGVMAGSTCPEQVMRKVQTQM 358
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYG TE S + +T D ++E Q VG+ H
Sbjct: 359 NMHQVLIAYGQTE-CSPINNITETDSSIER-------------------QVTTVGRALAH 398
Query: 372 VELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + + G + ++GA +M YW+ + WL +GD+G +D
Sbjct: 399 TEVKIIDELGNIQQIGQPGEVCSKGAGIMRCYWNDDAKTKATIDESGWLHSGDLGVMDTE 458
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V +VGR I GGEN+YP E+E VL +PGI + GI + R E V A ++ +E
Sbjct: 459 GFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDERYGEEVCAWIQPKE 518
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ +L + +R+ ++K L FK PR + + + +P+T TGK+++
Sbjct: 519 ----------------DAVLDEQAIREFLKDK-LAYFKMPR-HIRFVENYPMTVTGKLQK 560
Query: 547 DEVRREVMSHL 557
++R ++ L
Sbjct: 561 FKMREQMQEEL 571
>gi|138894562|ref|YP_001125015.1| long-chain fatty acid CoA ligase (AMP-binding) [Geobacillus
thermodenitrificans NG80-2]
gi|134266075|gb|ABO66270.1| Long-chain fatty-acid-CoA ligase [Geobacillus thermodenitrificans
NG80-2]
Length = 539
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 245/554 (44%), Gaps = 54/554 (9%)
Query: 9 ICQCL-SRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
+C L R A + +T G + T + V V A L +G++ GD VAI N
Sbjct: 25 VCDVLHERAAQFSSHPALTFYG-KTITYAELVAAVNRFASSLQTLGVQKGDRVAIMLPNC 83
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
Y+ + G IV +N +E + + ++ E ++
Sbjct: 84 PQYVIAYYGILQAGAIVTQVNPMLVERELAYVLNDSGAETIIIYEPLYPRLAAVREGTAI 143
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
VS G+ SS + D+ + L S + P A + AV+ +T GTTG K
Sbjct: 144 KRAVTVSFGAPSSASLAAEDVTFDEFLAEGSGQVRPVPIEPAHDVAVL-QYTGGTTGRSK 202
Query: 188 GVVISHSALIVQSLAKIAIV-GYGE--DDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFI 243
G +++H + L G E + YL PL H+ ++S M + + GA ++ +
Sbjct: 203 GAMLTHRNIFANVLQCAEFFKGTFEMGKERYLTVIPLFHVFAMTSGMNLAIYQGAENILL 262
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P+FE K LE + T VP + + V++ G S+K +G +P EL
Sbjct: 263 PRFELKEVLETIRDKQPTVFPGVPTMYVAITNTPGVEQY--GISSIKTCNSGSAPMPMEL 320
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
M++ + A ++ YG++E S +T +P P + +P V
Sbjct: 321 MRD-FEAKTGAVVLEGYGLSEASP----VTHCNP----------------PFAARKPGTV 359
Query: 364 CVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTG 418
+G P ++ + G+ VG ++ RG VM YW+ + +V+ + WL TG
Sbjct: 360 GIGMPLTEYKVVDVATGTQELPPGEVGELIIRGPQVMKGYWN-MPEETAVTLRDGWLYTG 418
Query: 419 DIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMV 478
D+ SID+ G V +V R+ I +GG N+YP EVE VL +HP + VV+G+ ++ E V
Sbjct: 419 DLASIDEEGYVTIVDRKKDMIIAGGYNIYPREVEEVLYEHPAVKEAVVIGVPDSYRGETV 478
Query: 479 VACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPL 538
A + L++ Q +E + + +HCR KNL +K PR+ V +R P
Sbjct: 479 KAVIVLKDGQQANEDD----------------IIRHCR-KNLASYKVPRI-VEFRTELPK 520
Query: 539 TSTGKIRRDEVRRE 552
T+ GKI R +R E
Sbjct: 521 TNVGKILRRALREE 534
>gi|229095506|ref|ZP_04226494.1| Acyl-CoA synthase [Bacillus cereus Rock3-29]
gi|407703382|ref|YP_006826967.1| 3-hydroxybutyryl-CoA dehydratase [Bacillus thuringiensis MC28]
gi|228687912|gb|EEL41802.1| Acyl-CoA synthase [Bacillus cereus Rock3-29]
gi|407381067|gb|AFU11568.1| Acyl-CoA synthase [Bacillus thuringiensis MC28]
Length = 516
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 239/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDCVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W+V S
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAMIERDFPNTSFWYVEDDKPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNAASSEKVDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ + S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLSQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 353 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-TKSLYKGWYHSGDLGYFDKDGYLFVADR 409
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 410 VDDMVISGGVNIYPREIEDYLHSHPGILDVAVLGEPDELWGERVVAVIV----------- 458
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L ++C+E + L +K PR + L+ P ++GK+++
Sbjct: 459 ------KKDETITEADLEKYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 504
>gi|91974734|ref|YP_567393.1| AMP-binding domain-containing protein [Rhodopseudomonas palustris
BisB5]
gi|91681190|gb|ABE37492.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 564
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 248/562 (44%), Gaps = 66/562 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAF 79
R ++V+ + + T ++F V LA G L +GL G + I ++N EW L A A
Sbjct: 36 REALVSPSHDTRWTWREFAACVDALAAGFLALGLERGARIGIWSMNRPEWTLTQ-FAAAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTAIPSLRWHVSLGSS 138
G I+ +N + E A+ + LVT + S Y+E+ +T IP L
Sbjct: 95 AGLILVTINPAYRLSELEFALAKVGCAALVTATAFKTSAYMEMLNTLIPELSQSQPGALQ 154
Query: 139 SSDFVNKRDMLT------------ADILKGYSLRSLPFTHSWAP----EGAVIICFTSGT 182
SS + R ++ D+ + R + A + AV I FTSGT
Sbjct: 155 SSKLPHLRAVIQIGGPKCPGTVAFDDLAQMGGARHREALAALAGRLQFDDAVNIQFTSGT 214
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TGSPKGV ++H ++ + E D PL H G+ +A + GA V
Sbjct: 215 TGSPKGVTLTHHNILNNGYFVGRAMKLTEQDRICIPVPLYHCFGMVMGNLAAVTSGATMV 274
Query: 242 FIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
+ + F+ + L+ + T+L VP + +A L + S++ + G P
Sbjct: 275 YPGEGFDPLATLQTASREKCTALYGVPTMF--IAELDHPEFASFDLSSLRTGIMAGAPCP 332
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
E+M+ + ++ AYGMTETS P +F + + Q
Sbjct: 333 VEVMRRVNDQMNMREVTIAYGMTETS-------------------PVSFQSAV-DDPEQR 372
Query: 361 QGVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+ VG+ PHVE+KV +G G + TRG +ML YWD+ V W+
Sbjct: 373 RVSTVGRIHPHVEVKVVDLEGRIVPRGQRGELCTRGYSIMLGYWDEAEKTADVLDRTGWM 432
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ IDD G +VGR + GGEN+YP E+E L +HP I + + G+A+ R
Sbjct: 433 HTGDLAVIDDEGFCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKIQDVQIFGVADNRYG 492
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E + A VR+R + L+++ +R C + + K PR ++ +
Sbjct: 493 EELCAWVRVRSGEK----------------LTADDIRAFC-QGQIAHNKIPR-YIEFVDE 534
Query: 536 FPLTSTGKIRRDEVRREVMSHL 557
FP+T TGKI++ +R +V S L
Sbjct: 535 FPMTVTGKIQKFVMREKVESKL 556
>gi|228946642|ref|ZP_04108951.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228813061|gb|EEM59373.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 522
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 250/535 (46%), Gaps = 60/535 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ D +A+S N + A A +G I+ P N +
Sbjct: 36 RRITYKQLKYEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 95
Query: 91 WSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
+ E + S P +L+ + E ++ E + ++ +++ S + +++
Sbjct: 96 YKSYEIEYILESSDPKLLIASGEFEKNFGFE---KVVNKVQKVITVRFSQEGYCPYEELI 152
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VG 208
+ + + H + I +TSGTTG+PKGV+++H A +VQS I +
Sbjct: 153 RTEKM------DIEPVHLNVNDDLFCILYTSGTTGTPKGVMVTHRA-VVQSAQTIGTELH 205
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ DV++ +APL HI G++ + + + +G + KF+ + L+ +EQ VT VP
Sbjct: 206 CTQKDVFIISAPLFHIFGMAINMLCAVAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVP 265
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L K S++ L G +P++ + E L ++G+TET S
Sbjct: 266 TMFIKELELEDFDKY--NLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETVS 322
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SS 382
MT YD T + N+T +GK P V +K+ + S
Sbjct: 323 --ITMTSYDDTKQ----------NITET---------LGKAIPGVTMKIVDENRVALPSG 361
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I +G VM Y++ V + W +GD+G++D G + VGR+ I G
Sbjct: 362 EVGEIAVKGFGVMKGYYNMPEQTNQVLDNDGWYYSGDLGTLDSQGYLRFVGRKKEMIIRG 421
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
G NVYP+E+EAV+++HP +I V+G+ + L E+ A +RL+ + +E
Sbjct: 422 GLNVYPQEIEAVIMKHPKVIEAAVIGLPDKVLGEVACAVIRLKNGEESTE---------- 471
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E ++ + +EK + +K P V++ FP+T++GKI++ ++ +V S++
Sbjct: 472 ------EEIKFYLKEK-MAIYKLPEK-VIFTDEFPVTASGKIQKLRLKEQVSSNI 518
>gi|395764069|ref|ZP_10444738.1| AMP-binding domain protein [Janthinobacterium lividum PAMC 25724]
Length = 559
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 255/564 (45%), Gaps = 68/564 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
+ ++++ N T QF Q V LA GLL++GL+ GD + I + N +EW L A A
Sbjct: 33 QHDALIVAHQNVRWTYLQFQQRVHRLAAGLLKLGLQPGDRIGIWSQNCAEWVLTQ-FATA 91
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLE----------------L 121
G I+ +N + E + ++ ++V+ S YL L
Sbjct: 92 KAGLIMVNINPAYRRSELEYVLDKVQCSALIVSPSFKSSDYLAIVQDVVPEIAGSRAGAL 151
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+ + +P LR + LG++++ ++ D L I + + + AV I FTSG
Sbjct: 152 RSSRLPQLRHVIRLGAAATPGMHNFDALMEGISDADLAHLEEVSATLQFDDAVNIQFTSG 211
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACH 240
TTG+PKG ++H +I + E D PL H G+ +A + GA
Sbjct: 212 TTGAPKGATLTHHNIINNGFFIGEAMRLTEHDRLCIPVPLYHCFGMVLGNLACVTHGAAM 271
Query: 241 VFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
VF + F+ KS L V+ T L VP + +A L +++ + G
Sbjct: 272 VFPGEGFDPKSVLGTVQAERCTGLHGVPTMF--IAILDHPDFKQYDLSTLRTGIMAGSPC 329
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P E+M A++ AYGMTETS ++F T D P+A + VH
Sbjct: 330 PMEVMTRVIELMHMAEITIAYGMTETSP-VSFQTSIDD--------PRAMRVASIGRVH- 379
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYW-DQFLAKPSVSTGEV 413
PH+E+K+ V G +LTRG VM YW D + ++ T
Sbjct: 380 ----------PHLEVKIIDAQGRIVPRGEKGELLTRGYSVMQGYWGDPEKTREAIDTAR- 428
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
W+ TGD+ IDD G +VGR + GGEN+YP EVE L +HP ++ + VG+ +A+
Sbjct: 429 WMHTGDLAVIDDKGFCSIVGRSKDMVIRGGENIYPREVEEFLYRHPSVLDVQCVGVPDAK 488
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E + AC+ LR Q SSE +R C + + +K PR +V +
Sbjct: 489 YGEELCACIILRPGMQ----------------ASSEDIRAFC-DGQIAYYKIPR-YVRFV 530
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
+ FP+T TGKI++ +R++V + L
Sbjct: 531 EQFPMTVTGKIQKYLLRQQVATDL 554
>gi|228928086|ref|ZP_04091130.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228831503|gb|EEM77096.1| AMP-dependent synthetase and ligase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 522
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 139/535 (25%), Positives = 250/535 (46%), Gaps = 60/535 (11%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T +Q +V LA +G+ D +A+S N + A A +G I+ P N +
Sbjct: 36 RRITYKQLKYEVDCLATAFKRLGVGKADRIAVSLPNWSETVVIYFAAAKLGAIIVPFNPK 95
Query: 91 WSFKEASRAITSIRPVMLV-TDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDML 149
+ E + S P +L+ + E ++ E + ++ +++ S + +++
Sbjct: 96 YKSYEIEYILESSDPKLLIASGEFEKNFGFE---KVVNKVQKVITVRFSQEGYCPYEELI 152
Query: 150 TADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI-VG 208
+ + + H + I +TSGTTG+PKGV+++H A +VQS I +
Sbjct: 153 RTEKM------DIEPVHLNVNDDLFCILYTSGTTGTPKGVMVTHRA-VVQSARTIGTELH 205
Query: 209 YGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ DV++ +APL HI G++ + + + +G + KF+ + L+ +EQ VT VP
Sbjct: 206 CTQKDVFIISAPLFHIFGMAINMLCAVAMGGRIILQEKFQPRETLQLIEQEKVTIQKGVP 265
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
+ L K S++ L G +P++ + E L ++G+TET S
Sbjct: 266 TMFIKELELEDFDKY--NLSSLRAGLVGAAPIPAKTVTEIRERM-GINLCQSFGITETVS 322
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SS 382
MT YD T + N+T +GK P V +K+ + S
Sbjct: 323 --ITMTSYDDTKQ----------NITET---------LGKAIPGVTMKIVDENRVALPSG 361
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I +G VM Y++ V + W +GD+G++D G + VGR+ I G
Sbjct: 362 EVGEIAVKGFGVMKGYYNMPEQTNQVLDNDGWYYSGDLGTLDSQGYLRFVGRKKEMIIRG 421
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
G NVYP+E+EAV+++HP +I V+G+ + L E+ A +RL+ + +E
Sbjct: 422 GLNVYPQEIEAVIMKHPKVIEAAVIGLPDKVLGEVACAVIRLKNGEESTE---------- 471
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E ++ + +EK + +K P V++ FP+T++GKI++ ++ +V S++
Sbjct: 472 ------EEIKLYLKEK-MAIYKLPEK-VIFTDEFPVTASGKIQKLRLKEQVSSNI 518
>gi|47564822|ref|ZP_00235866.1| fadD13 [Bacillus cereus G9241]
gi|47558195|gb|EAL16519.1| fadD13 [Bacillus cereus G9241]
Length = 518
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/533 (26%), Positives = 238/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI G + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVDIEIG----EMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPN 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+ VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DILP--PYEVGEIILRGPTMMAGYHNREEAN-TKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVVV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 ------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|426402279|ref|YP_007021250.1| long-chain fatty acid CoA ligase (AMP-binding) [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425858947|gb|AFX99982.1| long-chain fatty-acid-CoA ligase [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 499
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 225/498 (45%), Gaps = 59/498 (11%)
Query: 51 EIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT 110
+ G+ GD VA+ A N Y+ A+ +G I+ P+N+R + +E + IT P +++
Sbjct: 48 KFGICKGDRVAVLATNELEYVFLFFALQRLGAIMVPVNFRLTQREVNHIITDSSPKLVLF 107
Query: 111 DESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP 170
E+ Y ++ +P R ++ G D AD+L + +PF
Sbjct: 108 QET----YRDIVEN-LPGTRHYLMQGP---------DSFAADLLSPPAQGEVPFVPK--E 151
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS- 229
+I +TSGTTGSPKG ++++ + S+ + + D + P H GG +
Sbjct: 152 NDPAMILYTSGTTGSPKGAILTYKMIFWNSINTTLRLNISQTDCTVIFLPFFHTGGWNVL 211
Query: 230 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 289
+ GA VF+ KF+++ L E+ T L VP M +A R T +++
Sbjct: 212 TTPFIHRGAKVVFLKKFDAEQILSLSEKEKATLLFGVPTTMEMMARSPRFTDT--NLENI 269
Query: 290 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 349
+ + GG +P EL+K T + YG+TE ++ + D L G + F
Sbjct: 270 RYAIVGGEPMPLELIK--TWDQKGVPVRQGYGLTEFGPNVFSLNEED-ALRKIGSI--GF 324
Query: 350 GNV-TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSV 408
N T V P+G +G ++ VG +L RG +M YW A
Sbjct: 325 PNFYTEAKVVDPEGRELG--------------ANQVGELLLRGPMIMQGYWHNEKATQD- 369
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ E WL TGD+ D+ G ++VGR+ SGGENVYP EVE +L HPG++ V+G
Sbjct: 370 TIKEGWLYTGDLVRRDEEGYYYVVGRKKDMFISGGENVYPPEVEQILRTHPGVLEAAVIG 429
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + + E+ A V +SS + L+ E L QHC + NL FK P+
Sbjct: 430 VPDDKWGEVGKAFVV-------------RSSND----LTPETLHQHCVQ-NLAKFKIPKH 471
Query: 529 FVLWRKPFPLTSTGKIRR 546
FV P +GKI +
Sbjct: 472 FVFLPS-LPKGDSGKILK 488
>gi|409200096|ref|ZP_11228299.1| AMP-binding domain protein [Pseudoalteromonas flavipulchra JG1]
Length = 584
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 232/551 (42%), Gaps = 68/551 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFK 94
++++ + LA LL +G++ GD V I S N EW L A A IG I+ +N +
Sbjct: 72 REYLAKINQLAASLLAVGIQPGDRVGIWSPNNLEWSLVQ-FATAKIGAIMVCINPAYRPS 130
Query: 95 EASRAITSIRPVMLV-----------------TDESSDSWYLELQHTAIPSLRWHVSLGS 137
E + ++ MLV ES D + EL +PSL+ V +
Sbjct: 131 ELEYVLNNVECKMLVMAKSFKHSHYVDMIRELAPESYDCMFGELSSQRLPSLKQIVLIDE 190
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
+ L + + L + + + A+ I FTSGTTG+PKG ++HS ++
Sbjct: 191 DIEPGLMNFSTLLSKANDAHYLEANAIAANLSASDAINIQFTSGTTGNPKGATLTHSNIL 250
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSALEAV 255
L + E D PL H G+ + + GAC VF F+ LE V
Sbjct: 251 NNGLLVANAMKLTEQDKLCIPVPLYHCFGMVLGNLVCISKGACAVFPNDSFDPLVTLEVV 310
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
E+ T L VP + +A L T S++ + G P ++M++
Sbjct: 311 EREKCTGLHGVPTMF--IAQLEHSDFTQFDLSSLRTGVMAGSTCPEKVMRQVQTQMHMTD 368
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
++ YG TE S + +T D +E Q VG+ PH E+K
Sbjct: 369 VLIGYGQTE-CSPINNITEIDSPVEKRVQ-------------------TVGRAMPHTEVK 408
Query: 376 VCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
+ D H+ G + RG VM YW + + WL +GD+G +DD G V
Sbjct: 409 II-DELGHIAPIGTPGEVCARGYCVMKGYWQDPEKTAATIDNDGWLHSGDLGVMDDEGFV 467
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E VL H I V GI + + E V V+L+
Sbjct: 468 SIVGRIKDMIIRGGENIYPREIEEVLYHHHDIQDAAVFGIKDEKYGEEVCVWVQLKPGHY 527
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
SE + +R ++K L FK P+ L +P+T TGK+++ ++
Sbjct: 528 ISEQD----------------IRIFLKDK-LAYFKVPKHIKLVEN-YPMTVTGKLQKFKM 569
Query: 550 RREVMSHLKSL 560
R ++ S L +
Sbjct: 570 REQMESELDAF 580
>gi|453069337|ref|ZP_21972599.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
gi|452763636|gb|EME21916.1| AMP-binding domain protein [Rhodococcus qingshengii BKS 20-40]
Length = 529
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 155/553 (28%), Positives = 239/553 (43%), Gaps = 66/553 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
R++++ R T ++F + V LA GLL G+ GD V I A N + A A
Sbjct: 19 DRDALIDHASGRRWTYREFAEQVNGLAAGLLSRGVGKGDRVGIWAPNCPEWTFTQYATAK 78
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES---SD-SWYLELQHTAIPSLRWHVSL 135
+G I+ +N + E + LV+ S SD + +E P L + L
Sbjct: 79 VGAILVNINPAYRSHELQYVLEQAGISTLVSAASFKTSDYASMIETVRPQCPDLTSVLLL 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
GS D V D L A + + + A+ I +TSGTTG PKG +SH
Sbjct: 139 GSPEWDAV-LADGLAAQ--ASDPAPLAAAQAALSADDAINIQYTSGTTGFPKGATLSHHN 195
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL--------SSAMAMLMVGACHVFIPKFE 247
++ + Y E D P H G+ S AM++ G P F+
Sbjct: 196 ILNNGYFVGELCHYSEVDRVCIPVPFYHCFGMVMGNLACTSHGAAMVIPG------PAFD 249
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
+++LEAV+ TSL VP + +A L S++ + G P E+MK+
Sbjct: 250 PRASLEAVQAEKCTSLYGVPTMF--IAELALPDFDSFDLSSLRTGIMAGSPCPVEVMKQV 307
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+ +++ YGMTETS P + + +S+ Q + VG+
Sbjct: 308 IDRMGMSEVSICYGMTETS-------------------PVSLQTRSDDSIEQ-RTETVGR 347
Query: 368 PAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PH+E+K+ + G + TRG VML YW+ W+ TGDIG
Sbjct: 348 VGPHLEIKIVDPATGLTVPRGEPGELCTRGYSVMLGYWENPEKTAEAIDAARWMHTGDIG 407
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+D+ G V + GR + GGENVYP E+E L HP I+ V+G+ +A+ E ++
Sbjct: 408 VMDEAGYVAITGRIKDMVIRGGENVYPREIEEFLYTHPDILDAQVIGVPDAKYGEELMVW 467
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V++RE D L ++ +R C K L +K PR +V FP+T T
Sbjct: 468 VQMRE-------GADD--------LDADSVRAFCTGK-LAHYKIPR-YVHVVDEFPMTVT 510
Query: 542 GKIRRDEVRREVM 554
GK+R+ +R + +
Sbjct: 511 GKVRKIAMREQAI 523
>gi|424046952|ref|ZP_17784513.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
gi|408884589|gb|EKM23325.1| AMP-binding enzyme family protein [Vibrio cholerae HENC-03]
Length = 521
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 240/518 (46%), Gaps = 60/518 (11%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
N+A L +GL +GD VA+S N ++ + G +V PLN + +E + +
Sbjct: 39 NIAANLKRLGLEAGDKVALSCPNITYFPMVYYGILKAGCVVVPLNVLFKGREIAYHLNDS 98
Query: 104 RPVMLVTDESSDSW----YLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSL 159
E S+ Y + + +SL + S + + D A+ L+ +
Sbjct: 99 DAKAYFCFEGSEELPMGSYGRQGFSQAEQCEYFISLSAQSEEGEHAIDAWLAEELESFE- 157
Query: 160 RSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTA 219
+ + + +I +TSGTTG PKG +SH+ ++ +++ ++ D + T
Sbjct: 158 -----SVTRHGDDTAVILYTSGTTGQPKGAELSHTNMLTNAMSSQYLMRLEYSDTTMATL 212
Query: 220 PLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIR 278
PL H G + M A ++ G+ V IP+FE K +E + QH V+ VP + +A L
Sbjct: 213 PLFHSFGQTVMMNASVLTGSTMVLIPRFEPKFVIEQIIQHKVSVFAGVPTMY--IALLRA 270
Query: 279 VKKTWKGRDSVKKIL----NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
+++ + + VK L +GG LP E++++ + F + ++ YG++ET+ TF +
Sbjct: 271 GEQSPEHSELVKHSLRLGVSGGASLPVEVIRQFEHRF-ELPVLEGYGLSETAPVATFNHI 329
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHV 394
G+ P SV QP V K A ++K + +G + + V
Sbjct: 330 D--------------GDRLPGSVGQPLCGYVIKIA---DVKGHARPIGELGEVCIKSPSV 372
Query: 395 MLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
M Y +P + + W TGDIG +D+ GN+++V R I GG NVYP E+
Sbjct: 373 MKGYH----GRPEATRDALRDGWFLTGDIGRVDEHGNLFIVDRVKDMIIRGGYNVYPREI 428
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL+ P + + VVG + RL E V A V L + +++C S + L
Sbjct: 429 EEVLMCQPDVEMVAVVGEHDDRLGEEVHAHVVLHQ-----DAHC-----------SPDTL 472
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
CRE+ L +K PR V RK P+T+TGKI + E+
Sbjct: 473 IAWCREQ-LADYKYPRR-VFIRKALPMTATGKILKREL 508
>gi|423553278|ref|ZP_17529605.1| hypothetical protein IGW_03909 [Bacillus cereus ISP3191]
gi|401185004|gb|EJQ92102.1| hypothetical protein IGW_03909 [Bacillus cereus ISP3191]
Length = 518
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 240/539 (44%), Gaps = 54/539 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI G + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVDIEIG----EMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPN 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAK-PSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANVKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVVV---------- 460
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K+ ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 461 -------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 511
>gi|357039422|ref|ZP_09101216.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355358321|gb|EHG06089.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 559
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 142/550 (25%), Positives = 242/550 (44%), Gaps = 71/550 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLN--YR 90
++F + +A+GL+ +G+ G+ V+I A N + EW+L A IG ++ +N YR
Sbjct: 42 RKFRDICIQVAKGLMALGIEKGEHVSIWANNVQ---EWVLTQFGSAKIGAVLVTVNTSYR 98
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLT 150
E + ++LV + YL + + P L + ++++
Sbjct: 99 VFELEYLLKQSDSTTIILVNGVKQPNEYLNIMYELCPELNSCAPGQLKCARLPKLKNVIY 158
Query: 151 ------------ADILK-GYSLRSLPFTH---SWAPEGAVIICFTSGTTGSPKGVVISHS 194
AD+ + G + F + S P+ + + +TSGTTG PKGV+++H+
Sbjct: 159 IGEEKMPGMYNWADLYELGKQIADEEFVNRESSLHPDEVINMQYTSGTTGFPKGVMLTHT 218
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALE 253
+I + ++ + + DD P H G + M ++ GA + F +K+ LE
Sbjct: 219 NIIGNAFSQAECLNFTPDDCLCIPVPFFHCFGCVMGTMLCVVSGAAMAPVESFNAKNVLE 278
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
VE++ T+L VP + +A L ++K ++++ + G P E+MK N
Sbjct: 279 TVERNSCTALHGVPTMF--IAELEEMEKNKYNTNALRTGIMAGSPCPIEVMKSVVNKMGA 336
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ YG TE S +T DP Q + VG+ P+VE
Sbjct: 337 SEICITYGQTEASPGITMTRATDPI--------------------QLRVSTVGRALPNVE 376
Query: 374 LKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + G + TRG HVM Y+ A E WL TGD+ +D+ G
Sbjct: 377 VKIVDPETGEELLPGMQGELCTRGYHVMKGYYKMPEATAQTVDREAWLHTGDLAVMDENG 436
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ GR I GGEN+YP E+E L +P I + VVG+ + R E VVA V+L+
Sbjct: 437 YCKITGRLKDMIIRGGENIYPREIEEFLYTNPKIKDVQVVGVPSERYGEEVVAFVQLKPG 496
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
E+ + K + +H K P F+L+ +P T++GKI++
Sbjct: 497 EIAEEAEIKEFCNGK--------IARH---------KIPA-FILFIGEYPSTASGKIQKY 538
Query: 548 EVRREVMSHL 557
++R V L
Sbjct: 539 KLREMVTKVL 548
>gi|218778668|ref|YP_002429986.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
gi|218760052|gb|ACL02518.1| AMP-dependent synthetase and ligase [Desulfatibacillum alkenivorans
AK-01]
Length = 527
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 156/572 (27%), Positives = 256/572 (44%), Gaps = 71/572 (12%)
Query: 1 MANYSQAHIC-QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDI 59
M+ SQA++ Q L A ++ R + ++ LA G L+ G+ GD
Sbjct: 1 MSGMSQANLMGQILKETAEAAPDAPAYYFYGREISFKEMDDLSDKLAYGFLKEGILRGDR 60
Query: 60 VAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWY 118
+ I ALN +L A A IG V L+ R E + + RP +V+ ++ D+ Y
Sbjct: 61 IGIIALNQPEWLAVYFAAAKIGASVVGLSPRHPAPELLKLVQRSRPRAIVSLKNVGDTDY 120
Query: 119 LEL---QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI 175
+EL + L + +G ++ + L + L + PE ++
Sbjct: 121 VELLEQNKDKVKGLEFCYFIGGEGANGCKSLESLMEEEPDQELLTAA--CAQVEPEDEIM 178
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-ML 234
FTSGTTG PK I+H + I + A+ V DV + T PL H+GG++ MA ML
Sbjct: 179 FAFTSGTTGQPKAAAITHKSQIASARAQTKHVRVTSKDVLMLTQPLSHVGGITIGMASML 238
Query: 235 MVGACHVFIPKFESKSAL-EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD-----S 288
+ G + IP F + L +A E H P I+ T + +G D +
Sbjct: 239 LAGGPTILIPVFLPEEVLNQAAEYH--------PTIIGGFPTTHHMLMAHEGFDKMDVSN 290
Query: 289 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 348
++ ++ GG +L++ ++P++ +++ YG++E+S G L
Sbjct: 291 IRVVITGGSNAEPDLVERLHQAYPESTIMNLYGLSESSG---------------GAL--- 332
Query: 349 FGNVTPNSVHQPQ-GVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWD-- 400
+TP + H G VGKP P ++K+ DG + G + +G V+ Y+D
Sbjct: 333 ---MTPWNCHYTMVGRTVGKPFPGFDVKIVGMDGRELPVNETGEVWLKGDCVVTGYFDMP 389
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
+ AK TG WL TGD+ D+ G + L+GRR G NV+P EVE +L HP
Sbjct: 390 EETAKTFDQTG--WLRTGDMAYKDEEGFIILMGRRTEMYIQEGLNVFPVEVEDILSTHPA 447
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
+ + +GI + E+ V SE+N D+ LR C + +L
Sbjct: 448 VDMVAGIGIPDPVYGEVGRYYVVPSPG---SETNEDE-------------LRSFCIQ-SL 490
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
+K P+ V +R+ P+T+ GKI++ ++RRE
Sbjct: 491 ADYKVPKQIV-FRQDLPMTALGKIKKSDLRRE 521
>gi|398816032|ref|ZP_10574690.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
gi|398033379|gb|EJL26682.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Brevibacillus
sp. BC25]
Length = 552
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 245/568 (43%), Gaps = 83/568 (14%)
Query: 29 GNRHNTGQQFVQDVLN-LARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAP 86
G R+ G+ Q + N ARG + +G++ G+ +AI A N EW + A A +GG++
Sbjct: 30 GLRYTFGE--FQAICNQAARGFMSLGIQKGENIAIWATNVPEWVISQ-FATAKMGGVLVT 86
Query: 87 LNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYLE----------------LQHTAIPSL 129
+N + E + S +L+ D D+ YL LQ +P L
Sbjct: 87 VNTSYRVHELEYLLRQSESTTLLLIDSYRDANYLAMIQEICPELQTCEPGALQSKRLPHL 146
Query: 130 RWHVSLGSSS-------SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+ + LG+ SD + + +T + S R + +P+ + + +TSGT
Sbjct: 147 KNVIYLGNERQPGMFLWSDLLERAAWVTEE---ERSARQA----TLSPDDVINMQYTSGT 199
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHV 241
TG PKGV++SH ++ ++ G +D P H G + +A + GA V
Sbjct: 200 TGFPKGVMLSHVNIVNNAIKVAECQRLGLEDKVCIPVPFFHCFGCVMGTLACVATGATMV 259
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ F+ L VE T+L VP + +A L + S++ + G P
Sbjct: 260 PVIAFDPGVVLAVVEAERCTALYGVPTMF--IAELNHPMFADRDLSSLRTGIMAGSLCPI 317
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK+ + + AYG TE S +T P + +
Sbjct: 318 EVMKKVVDQMGIRDITIAYGQTEASPVIT--------------------QTVPEDSLERK 357
Query: 362 GVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ VE K+ + + G + TRG VM Y++ E WL
Sbjct: 358 VSTVGRLHAEVEAKIIDPATGDILPPGVQGELCTRGYLVMKGYYNMPEETVKAIDHEGWL 417
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+ ++D+ G + GR I GGEN+YP EVE L HP ++ + +VGI +A+
Sbjct: 418 HTGDLATVDEEGYYRITGRLKDMIIRGGENIYPREVEEFLYTHPKVLDVQIVGIPDAKYG 477
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E V+AC+R+ K E L EV R +C E + +K PR ++ +
Sbjct: 478 EQVLACIRV---------------KPHETLTEDEV-RDYC-EGKIAHYKVPR-YIQFVDE 519
Query: 536 FPLTSTGKIRRDEVRREVMSHLKSLPSN 563
+P+T++GKI++ ++R + + + N
Sbjct: 520 YPMTASGKIQKFKLREQALELFRQSNPN 547
>gi|383826927|ref|ZP_09982042.1| long-chain-fatty-acid--CoA ligase [Mycobacterium xenopi RIVM700367]
gi|383331505|gb|EID10001.1| long-chain-fatty-acid--CoA ligase [Mycobacterium xenopi RIVM700367]
Length = 475
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/536 (26%), Positives = 229/536 (42%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G+ T Q V + A IGL GD VAI A N EWI+A AF
Sbjct: 19 DAEAVVDGSLRLTFAQLVDRIRCAAGAFAGIGLDKGDRVAIWAPNCA---EWIIA-AFGL 74
Query: 80 --IGGIVAPLNYRWSFKEASRAIT--SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ EA+ IT ++ V+ V
Sbjct: 75 LTAGGVLVPVNTRFQAAEAADIITRSGVKAVL-------------------------VEK 109
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G DF + D+ + P + + + +TSGTTG PKGV+++H+
Sbjct: 110 GFLGRDFAVPAGVPAIDLKSDFLASGSPLEREVSGDDIADVIYTSGTTGRPKGVMMNHAQ 169
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEA 254
+ + E D YL P H G + +A L+ GA + + FE LE
Sbjct: 170 TLRNYADWCELADLREGDRYLIVNPFFHTFGYKAGCIASLIRGATMIPVAVFEVDRVLEL 229
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
VE+ VT L P + L R K+ S++ + G +P EL++ + P
Sbjct: 230 VERERVTMLPGPPTLYHSLLA-ARGKRDLS---SLRAAVTGAADIPVELVRRIRSDLPFQ 285
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+++ YG+TE + T + +F ++ + G+P +E+
Sbjct: 286 SIMTGYGLTEAGTV------------TASRRGDSFEDIATTA---------GRPCDGLEV 324
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG +L RG VM Y D +A E WL TGD+G++D G + +VGR
Sbjct: 325 RIADDGE-----VLVRGYSVMQGYLDDPVATAEAIDDEGWLHTGDLGNLDAHGRLRIVGR 379
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL+HP + V+G+ + RL ++ A +
Sbjct: 380 KKDMFIVGGFNAYPAEIEGFLLEHPAVAQAAVIGVPDERLGQVGKAFI------------ 427
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ + ++ L CRE+ + GFK PR V + + P+ +TGK+ +D++R
Sbjct: 428 ------VRNAAVEADDLLSWCRER-MAGFKVPRA-VQFVEALPVNATGKVMKDDLR 475
>gi|256820840|ref|YP_003142119.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
gi|256582423|gb|ACU93558.1| AMP-dependent synthetase and ligase [Capnocytophaga ochracea DSM
7271]
Length = 542
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/548 (26%), Positives = 238/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ + T +F V +A+GL+ +G++ GD V I + N EW L A
Sbjct: 35 KEALISVHQDYRVTYAEFYAQVTAVAKGLIALGVKQGDRVGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + + S Y ++ A +LR V
Sbjct: 92 AKIGAIMVNINPAYRTSELIYVINQSGISYIFAAPQFKSSNYKKMIDDAREFTETLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G S F+ + +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGESWQHFLAHGEKVTDEKL-------LSFEERVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + Y E D P H G+ + IP F++
Sbjct: 205 HNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNIACTTHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T + P + Q VG H
Sbjct: 323 NMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSVGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 363 LEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGDLAMMDE 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVMAWIKPK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E + L+ E L C+ + + +K PR W+ + FP+T +GK
Sbjct: 483 EG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|407278065|ref|ZP_11106535.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Rhodococcus
sp. P14]
Length = 507
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 147/527 (27%), Positives = 232/527 (44%), Gaps = 61/527 (11%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T ++ + V LA L G+ GD VA+ + N YLE + A +G + PLN R +
Sbjct: 31 TYRELDERVTRLAHALRAQGVGPGDRVALLSANHPAYLEVLFAAGLLGAVFVPLNARLTT 90
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E + ++LV ++ + + TA + R V G+ V +++ AD
Sbjct: 91 PEVEYCLADSGSIVLV-HSAALTDVADAAATAAGTTRRVVLDGAPDDRAVGYEEIVAADP 149
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
L P TH E I +TSGTTG PKGVV++H ++ + I + + D+
Sbjct: 150 TDRLDL---PVTH----EDPCFIMYTSGTTGRPKGVVLTHGNVVFAVMNPIVDLDFLSDE 202
Query: 214 VYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMAD 272
V L APL H L+ A+ L+ G + FE L +E VT VP ++
Sbjct: 203 VALVAAPLFHTAALNFVALPTLLKGGTVLIEEGFEPGRILHLIETERVTYSFGVPTMLDA 262
Query: 273 LATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLT 330
++ W D S+++ + +P ++ T +L YG+TET
Sbjct: 263 MSA----HPNWDRTDLSSIRRWIVAAAPVPPRTLQTYTAR--GVRLCQGYGLTETG---- 312
Query: 331 FMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV----G 385
PG L +TP + G G P +++V DG+ G
Sbjct: 313 -----------PGAL-----ILTPKDAERKLGTA-GAPHFFTDVRVVDPDGTEAAPGERG 355
Query: 386 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 445
I G +VM RYW++ A TG+ W +GD+G D+ G V +V R I SGGEN
Sbjct: 356 EIQISGPNVMQRYWNRPDATADAFTGDGWFRSGDVGVPDEDGFVTIVDRLKDMIISGGEN 415
Query: 446 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 505
+YP EVEA +L PG++G V G+ + + E+ A V L + +
Sbjct: 416 IYPAEVEAAILDLPGVLGCAVFGVPDEKWGEVGRAAVTLADG----------------VT 459
Query: 506 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
L+ E L E+ L +K P+ ++ + P +TGK+R+D +R +
Sbjct: 460 LTEEELFAFLGER-LAKYKIPKSLLVLDE-IPRNATGKVRKDTLREQ 504
>gi|213962564|ref|ZP_03390826.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
gi|213954890|gb|EEB66210.1| acyl-CoA synthetase family member 2 [Capnocytophaga sputigena
Capno]
Length = 544
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/548 (26%), Positives = 237/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ N T +F + V +A+GL+ +G + D V I + N EW L A
Sbjct: 35 KEALISVHQNYRVTYTEFYEQVTAVAKGLIALGAKPSDRVGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + E S Y ++ A +LR V
Sbjct: 92 AKIGVIMVNINPAYRTSELIYVINQSGISFIFAAPEFKSSNYKKMIDDAREFTETLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G S F+ +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGDSWERFLENGKKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + + Y E D P H G+ V + IP F++
Sbjct: 205 HNILNNAYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLACTVHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LEAVEKEKCTSLYGVPTMF--ISELYILDKHPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS P G +H VG H
Sbjct: 323 NMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----VGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 363 LEIKIINPETKAIVKRGESGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGDLAMMDE 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYEGVMDAQVIGVPSKKYGEEVMAWIKTK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E + L+ + L C+ + + +K PR W+ + FP+T +GK
Sbjct: 483 EG----------------VTLTEQELHDFCKGR-IAHYKVPR---YWKFVEEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|256393520|ref|YP_003115084.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256359746|gb|ACU73243.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 506
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 182/400 (45%), Gaps = 61/400 (15%)
Query: 165 THSWAPEGA---VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 221
T AP A ++ +TSGTTG PKG ++H L + + G DDV L PL
Sbjct: 153 TGDIAPTNADDTAVVLYTSGTTGKPKGAELTHFQLYMNCTVSGDLFGIRPDDVSLAVLPL 212
Query: 222 CHIGGLSSAMAMLMVGA-CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
H+ GLSS + + + A +P+FE + L+A+E+H T VP + L+
Sbjct: 213 FHVFGLSSVLNVAVRNAGTMALVPRFEIEPVLDAMEKHRCTIFSGVPTMYF---ALLHAD 269
Query: 281 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
+ +++ +GG +P E+++ FP ++ YG++E++S+ TF
Sbjct: 270 TAERDLSALRVGCSGGAPIPGEVIRAFEEKFPGVVILEGYGLSESASTTTF--------- 320
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS-------SHVGRILTRGAH 393
N+ S Q + +GKP VE +V D HVG I+ RG +
Sbjct: 321 ----------NI---SAEQRKVGSIGKPVWGVETRVVDDAGRTLPPRPEHVGEIVIRGHN 367
Query: 394 VMLRYWDQFLAKPSVSTGEV---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEE 450
+M YW P + V W TGD+G D+ G ++V R+ + GG NVYP E
Sbjct: 368 MMKGYW----GNPEATAEAVRDGWFHTGDLGYADEDGYFYIVDRKKDMVIRGGFNVYPRE 423
Query: 451 VEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEV 510
VE VL HP I V+G A+ RL E VVA V L+ E +
Sbjct: 424 VEEVLYTHPAIAEAAVIGRADERLGEEVVAYVALKAGAHADEQD---------------- 467
Query: 511 LRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ CR++ + +K PR V + P+ TGKI + E+R
Sbjct: 468 VIAFCRDR-MAPYKYPRE-VRFLSALPVGPTGKILKKELR 505
>gi|375141237|ref|YP_005001886.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359821858|gb|AEV74671.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 545
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 237/548 (43%), Gaps = 57/548 (10%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
++V ++G+R T + ++ +AR L+ + GD V I A N + A A IG
Sbjct: 39 EALVDVSGDRRWTYAELNAEIDCVARALMASNIARGDRVGIWAPNCPEWTILQYATAKIG 98
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLEL---QHTAIPSLRWHVSLGS 137
I+ +N + E + MLV+ S S Y + + IP + V LG+
Sbjct: 99 AILVAINPAYRTHELGYVLRQSGTRMLVSATSFKTSDYRSMIGEVRSEIPDVTDIVFLGT 158
Query: 138 SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
+ + + R + + +LRS P V I +TSGTTGSPKG +SH ++
Sbjct: 159 ADWEQLRAR----SRRVSMAALRSR--MGELQPGDPVNIQYTSGTTGSPKGATLSHRNIL 212
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAV 255
++ G + P H G+ A + IP F+ +AL AV
Sbjct: 213 NNGFFVTELIKLGPGERLCIPVPFYHCFGMVMANLGCTTHGATMVIPAAGFDPAAALAAV 272
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
E+ T+L VP + +A L S++ + G P ELMK + ++
Sbjct: 273 EKERCTALYGVPTMF--IAMLGHPDLGEHDLSSLRTGIMAGATCPMELMKRCVSELNMSE 330
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
L AYGMTETS ++ TL D L+ + VG+ PHVE++
Sbjct: 331 LAIAYGMTETSP-VSCQTLIDDDLDR-------------------RTATVGRAHPHVEIR 370
Query: 376 VCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
+ + + G TRG VML YWD + W+ TGD+ + D G
Sbjct: 371 IVDPETGRITKRGEPGEFCTRGYSVMLGYWDDDDRTREAVDSDGWMRTGDLAVMRDDGYC 430
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
++GR + GGENVYP EVE L HP I + V+G+ + + E + A +R+R
Sbjct: 431 MIIGRIKDMVIRGGENVYPREVEEFLHTHPDIDDVQVIGVPDTKYGEEICAWIRMR---- 486
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+ C L ++ +R + L +K PR +V FP+T TGK+R+ ++
Sbjct: 487 ---AGCTP--------LDADGVRAFASGR-LAHYKIPR-YVHIVDEFPMTVTGKVRKVDM 533
Query: 550 RREVMSHL 557
R E + L
Sbjct: 534 RTETVRLL 541
>gi|400537853|ref|ZP_10801375.1| long-chain-fatty-acid--CoA ligase [Mycobacterium colombiense CECT
3035]
gi|400328897|gb|EJO86408.1| long-chain-fatty-acid--CoA ligase [Mycobacterium colombiense CECT
3035]
Length = 467
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 144/536 (26%), Positives = 238/536 (44%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T +Q V+ + A ++G+ GD +AI A NS EWI+A AF
Sbjct: 11 DAEAVVDGPLRLTFRQVVERIRCAAGAFADLGVEKGDRIAIWAPNSA---EWIIA-AFGL 66
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ +EA I + ++ V++ +L+ +TA P+ V +
Sbjct: 67 LTAGGVLVPVNTRFKAEEAGDIIVRSKVKAVLV------QKGFLDQDYTA-PA---GVPV 116
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + + I FTSGTTG PKG ++SH
Sbjct: 117 IDLKSDFLSS---------------GSPFERAVSGSDTSDIIFTSGTTGRPKGAMLSHGQ 161
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEA 254
+ + E D YL P H GL + + + GA + + F+ + ++
Sbjct: 162 TLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSFLRGATMLPVAVFDVDTVVKL 221
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ +T L P + L T+ K +++ + G +P EL++ + P
Sbjct: 222 IERERITMLPGPPTLYHSLLTVGDKSKL----STLRAGVTGAADIPVELVRRIHDELPFQ 277
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG +F +V + G P VE+
Sbjct: 278 TLMTGYGLTEAGNV---------TLSLPGD---SFEDVATTA---------GVPCDGVEV 316
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG +L RG VM Y D+ A E WL TGD+G + G + +VGR
Sbjct: 317 RIADDGE-----VLVRGYGVMKGYLDEPEATAQAIDDEGWLHTGDLGDFTETGRLRIVGR 371
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL HP + V+G+ + R+ ++ A V
Sbjct: 372 KKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGVPDERMGQVGKAFV------------ 419
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+E +S++ L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 420 ------VREGDVSADELIGWCRDR-MAGFKVPRT-VEFLNSLPLNATGKVMKDQLR 467
>gi|448237470|ref|YP_007401528.1| long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
gi|445206312|gb|AGE21777.1| long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
Length = 524
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 151/541 (27%), Positives = 248/541 (45%), Gaps = 54/541 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R +VV R T ++ ++V A LE G+R GD V+ N+ + A + I
Sbjct: 19 REAVVDAATGRRYTYAEWEREVNRWANAFLEAGVRKGDRVSTVLYNTLELATALFACSKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G + P+N+R +E + +T P +++ + + +E + AI S HVS S
Sbjct: 79 GAVFNPINFRLRAEEIAYILTDAEPKIVLFERA-----VEPELAAIHSRFPHVSFWSIDR 133
Query: 141 D---FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI 197
D F A +L P H + I+ +TSGTTG PKGV+ H +I
Sbjct: 134 DPPPFAK-----NAHEQAARALGEAPRVHVDESDLYAIM-YTSGTTGRPKGVMHRHRDMI 187
Query: 198 VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVE 256
QS+ ++ E D L APL H L + + GA V + F++K LE +E
Sbjct: 188 EQSVICHGVMRIRETDRGLAAAPLFHCAELHCCLLPRVHAGAASVILHHFDAKLVLETIE 247
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKA 314
+ +T L P + + +++ G D S++ L G + L+++
Sbjct: 248 RERITILFGAPTMWNMI-----LQENVSGYDLSSLRLGLYGAAPMAPALVRQCQERL-GI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+LI AYGMTE ++TF+ L D L+ G +A N H+ + V + P
Sbjct: 302 ELIQAYGMTEMGPAVTFL-LEDEQLKKAGSAGRACLN------HEIRVVRAREDGPSDPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y+ + A + ++ G W +GD+G +D+ G +++
Sbjct: 355 DVLP--PYEVGEIVMRGPCMMAGYYKREEATEKALYKG--WYHSGDLGYLDEDGYLYVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGGENVYP EVE VL +HP ++ + V+G + E VVA V
Sbjct: 411 RVDDMVISGGENVYPREVEDVLYEHPKVLDVAVLGEPDELWGEKVVAFV----------- 459
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K+ LL+++ L Q C+ + L +K PR + P ++GKI++ +R +
Sbjct: 460 ------VKKDDLLTADELEQFCKTSDRLAPYKRPRAYYFI-DALPRNASGKIQKFLLREQ 512
Query: 553 V 553
+
Sbjct: 513 L 513
>gi|332666556|ref|YP_004449344.1| long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
gi|332335370|gb|AEE52471.1| Long-chain-fatty-acid--CoA ligase [Haliscomenobacter hydrossis DSM
1100]
Length = 514
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 235/537 (43%), Gaps = 90/537 (16%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLN---------YRWSFK 94
+A GL G++ GD VA+S N ++ + G +V PL+ Y
Sbjct: 39 QVANGLKSKGIQPGDKVALSCFNLPYFPIIYFGILKAGAVVVPLSVLLKKDEIVYHLGDS 98
Query: 95 EASRAITSIRPVMLVTDE----------SSDSWYLEL-QHTAIPSLRWHVSLGSSSSDFV 143
EA + L + + + ++L + Q T PS+ +LGS
Sbjct: 99 EAKAYFCFVGTPDLPMGQLGHQAFSEASTCEHFFLIMPQPTDAPSIPGVATLGS------ 152
Query: 144 NKRDMLTADILKGYSLRSLPFTHSWA--PEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
++ G S P S+A E II +TSGTTG PKG ++HS L+ ++
Sbjct: 153 ---------LMAGQS----PVAESYATGAEDTAIIIYTSGTTGRPKGAELTHSNLLQNAI 199
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCV 260
+VG +D L PL HI ++ M A L A V +P+F++++ + +H V
Sbjct: 200 LSADLVGIRPEDTLLIVLPLFHIFAMTVLMNAGLYRAATSVLLPRFDAEAVFGLMAKHKV 259
Query: 261 TSLITVPAIMADLATLIRVKKTWKGRDSVKKI-LNGGGGLPSELMKEATNSFPKAKLISA 319
T VP + L K + G + +I ++GG LP +++K+ F +I
Sbjct: 260 TVFAGVPTMYWGLLNYREEKFDYPGIAAQLRIAVSGGASLPVQVLKDFEARF-NVPIIEG 318
Query: 320 YGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
YGM+E S +TF P+ +P +G P VE+K+ D
Sbjct: 319 YGMSEGSPVVTFNH--------------------PDRPRKPG--SIGTPVWGVEVKLIDD 356
Query: 380 GSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V G++L RG +VM Y+ + A + S + WL +GD+ D G ++V R
Sbjct: 357 KGQTVPVGEKGQLLYRGHNVMKGYYRK-PAATAESLKDGWLHSGDVAIEDADGYFYIVDR 415
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
I GG NVYP EVE V++QHP I + V+G+ + E + ACV L++ S
Sbjct: 416 TKDMIIRGGFNVYPREVEEVMIQHPAISMVAVIGVPDDEYGEEIKACVVLKDGVSASPEE 475
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
+ +K + + G+K PR+ L P+++TGKI + E+R+
Sbjct: 476 IIEWTKER-----------------IAGYKYPRVVELLAA-LPMSATGKILKKELRK 514
>gi|325001542|ref|ZP_08122654.1| putative feruloyl-CoA synthetase [Pseudonocardia sp. P1]
Length = 455
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 223/514 (43%), Gaps = 71/514 (13%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA GL +G+R GD V N YLE + A A +G + P+N R + E + +
Sbjct: 1 LAAGLRGLGVRRGDRVGYLGPNHPAYLETLFATASLGAVFVPVNARLAAPELAFVLDDAG 60
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
+LV ++ + + A +LR + +G S D L G + P
Sbjct: 61 VSVLVHTPAAG---VLVDAAAARTLRERLVVGGSY------------DALAGAAAE--PV 103
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
+ +I +TSG+TG PKG V+SH L + + D+V L APL H
Sbjct: 104 DEPVGADDPCLIMYTSGSTGRPKGAVLSHGNLTWNCVNVLVESDLSGDEVALVAAPLFHT 163
Query: 225 GGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
L + + L+ G V + F+ +ALE V +H VT L VPA+ LA + W
Sbjct: 164 AALGMTCLPTLLKGGTCVLMEAFDPAAALELVARHRVTLLFGVPAMYDALAA----RPEW 219
Query: 284 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 341
D SV+ +L GG +P+ + + YGMTET+
Sbjct: 220 ADTDLSSVRTLLCGGSPVPAATARRWLER--GLAFVQGYGMTETA--------------- 262
Query: 342 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVML 396
PG L + P S G G P+ ++++ V G IL RG +VML
Sbjct: 263 PGVL-----VLDPGSARTKAGTA-GVPSFFTDVRIAGPSGEPVAPGERGEILVRGPNVML 316
Query: 397 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 456
YW++ A G W+ +GD+ + D G V +V R I SGGENVYP E+E+ L
Sbjct: 317 GYWNRPDATDEALAGG-WMHSGDVATADADGYVTVVDRIKDMIISGGENVYPAEIESALY 375
Query: 457 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 516
+HP + VVG +AR E+ A V LR ++ +R H R
Sbjct: 376 EHPSVELCAVVGTPDARWGEVPRAVVVLRAGAA----------------ADADGIRAHLR 419
Query: 517 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
++ L G+K PR V + P T +GK+ + +R
Sbjct: 420 DR-LAGYKVPR-HVDFADDLPRTGSGKVLKAALR 451
>gi|113867951|ref|YP_726440.1| AMP-binding domain protein [Ralstonia eutropha H16]
gi|113526727|emb|CAJ93072.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Ralstonia
eutropha H16]
Length = 574
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 246/551 (44%), Gaps = 73/551 (13%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
++F V LA GL +GL GD V I + N +L A A +G ++ +N + E
Sbjct: 62 REFSDAVDALAAGLHTLGLARGDRVGIWSPNRVEWLVTQFATARLGLVLVNINPAYRLSE 121
Query: 96 ASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSLGSS 138
A+ + +V E+ S YLE LQ +P+LR + +G
Sbjct: 122 LEYALNKVGVKAIVAAEAFKTSRYLEMLQVLAPELATCAPGELQAARLPALRCVIRMGDD 181
Query: 139 SSDFVNKRDMLTADIL---KGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+ + + AD++ G + +L T + + FTSGTTG+PKG ++H
Sbjct: 182 HTPGM----LRYADVIARGTGVARSTLDAITAQLDRHDPINVQFTSGTTGAPKGATLTHR 237
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSAL 252
++ + + + E D P H G+ A +A + GA VF + FE ++ +
Sbjct: 238 NIVNNARFIAMAMRFSEQDKLCIPVPFYHCFGMVLAVLACVSSGAAMVFPGQAFEPEATM 297
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+AV + T+L VP + +A L S++ + G P E MK +
Sbjct: 298 QAVSEERCTALHGVPTMF--IAQLDHPNFASYDFSSLRTGIMAGSPCPIETMKRVVSQMH 355
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+++ AYGMTETS P +F + T + + + + VG+ PH+
Sbjct: 356 MSEVTIAYGMTETS-------------------PVSFQSSTTDPLDK-RTTTVGRIQPHL 395
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
E+++ + V G + TRG VML YWD A+ + + + W+ TGD+ +ID G
Sbjct: 396 EVRIVDATGATVPVGETGELCTRGYSVMLGYWDD-EARTAEAIRDGWMHTGDLATIDAEG 454
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+VGR + GGEN+YP E+E L +HP + + V G+ + + E V A + L+
Sbjct: 455 YCNIVGRVKDMLIRGGENIYPREIEEFLFRHPKVQAVQVFGVPDQKYGEEVCAWIVLKPG 514
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+E +R CR++ + +K PR ++ + P+T TGK+++
Sbjct: 515 ASATEDE----------------IRDFCRDQ-IAHYKIPR-YIRFVDEMPMTITGKVQKF 556
Query: 548 EVRREVMSHLK 558
+R + LK
Sbjct: 557 VMRERMTQDLK 567
>gi|423382412|ref|ZP_17359668.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG1X1-2]
gi|401644915|gb|EJS62594.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG1X1-2]
Length = 518
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 241/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCHEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNTASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ T S+K + GG + L+K
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVK 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 294 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 346 NEDAPAEPDDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 401
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 402 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 460
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 461 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 503
Query: 544 IRR 546
+++
Sbjct: 504 LQK 506
>gi|219851671|ref|YP_002466103.1| AMP-dependent synthetase and ligase [Methanosphaerula palustris
E1-9c]
gi|219545930|gb|ACL16380.1| AMP-dependent synthetase and ligase [Methanosphaerula palustris
E1-9c]
Length = 566
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 155/570 (27%), Positives = 251/570 (44%), Gaps = 79/570 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWI---LA 76
+ ++++++ N T QF++ V L +GL+ +G+ GD V I +N Y EW A
Sbjct: 33 ENDALISLHQNIRWTYAQFLEQVNALGKGLMALGVERGDRVGIWVMN---YAEWTVAQFA 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYLELQHTAIPSLRWHV 133
A IG ++ +N + E A+ L+ +SSD Y+ + + A P +
Sbjct: 90 SAKIGAVMVNINPAYRTVELEFAMKQAEVQTLILQGRFKSSD--YVGMFYEACPEA-YEC 146
Query: 134 SLGSSSS------------DFVNKRDMLTA-DILKGYSLRS----LPFTHSWAPEGAVII 176
S G SS D + M T ++LK + S + S + A+ I
Sbjct: 147 SPGRISSEKFPFLKNVIFLDDIPYNGMFTMNEVLKKGEVISPDELVEREESLDFDDAINI 206
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLM 235
+TSGTTG PKGVV++H +++ + + E D P H G+ S MA +
Sbjct: 207 QYTSGTTGYPKGVVLTHHSVMNNGFFIGEGMNFTEKDRLCIPVPFYHCFGMVLSNMASVT 266
Query: 236 VGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
GA V P F+S++ L AV+ T+L VP + K + G +++ +
Sbjct: 267 HGATMVIPSPAFDSEAVLRAVQDEHCTALHGVPTMFIAELAHPNFKNYYLG--TLRTGIM 324
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G P E MKE ++ YG TE S +T T D + QAF
Sbjct: 325 AGSPCPIEKMKEVATLMNMRDIVIVYGQTELSPGVTMTTTKDSLERRVSTIGQAF----- 379
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-------VGRILTRGAHVMLRYWDQFLAKPS 407
PH ELK+ D ++H +G I RG VM Y++ A +
Sbjct: 380 ---------------PHTELKIV-DPNTHRIVSRGEIGEICARGYMVMKGYYNNPAATRA 423
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
W+ TGD+GS+D G + + GR + GGENVYP E+E L HP I + V+
Sbjct: 424 ALDANGWVHTGDLGSMDREGFLKVEGRLKDMVIRGGENVYPREIEEYLHHHPKISDVYVI 483
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E ++A V + K L+ + +R+ C+ + + +K PR
Sbjct: 484 GVPDKKYGEELMAWVSIM----------------KGETLTPDEIREFCKNR-IARYKIPR 526
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ + FP++ TGKI++ E+R+ + L
Sbjct: 527 YY-KFVDTFPMSVTGKIQKFEMRKIAIEEL 555
>gi|271967357|ref|YP_003341553.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
gi|270510532|gb|ACZ88810.1| AMP-dependent synthetase and ligase [Streptosporangium roseum DSM
43021]
Length = 553
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 164/568 (28%), Positives = 254/568 (44%), Gaps = 82/568 (14%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLE-IGLRSGDIVAISALNSEW 69
+ L ++ + V + H T ++ + LAR L+E G+ GD VAI+ N
Sbjct: 42 RALLEMSRFHGDKVFLTYEDEHITYEEHFRRAATLARRLVEDYGVVKGDRVAIAMRN--- 98
Query: 70 YLEWILAVAFI---GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
Y EW++A + G + PLN W+ +E ++ +L+ D + L + I
Sbjct: 99 YPEWVVAFSATLAAGAVAVPLNAWWTAQELEFGLSDSGAKVLIADGERAARLGGLAQSLI 158
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ R G+ S F + + AD+ +LP T +PE I +TSGTTG P
Sbjct: 159 VA-RGEAPEGARS--FEDVLGAVEADV-------TLP-TVELSPEDPATIFYTSGTTGRP 207
Query: 187 KGVVISHSALIVQSLAKIA------IVGYGEDD--------VYLHTAPLCHIGGLSSAMA 232
KG + SH L QS +A +V G+D V L T PL H+ G + M
Sbjct: 208 KGALGSHRNL-GQSPMTVAYGLLRSVVRAGKDPAESAGQRRVTLLTVPLFHVTGCFAVMT 266
Query: 233 MLM-VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
M G V + K+++ ALE +E+ VT+ VP + L + + K S+
Sbjct: 267 TTMFTGGGLVLMYKWDAGRALELIEREKVTTFSGVPTNVWQLLSHPGLDK--HDISSLNS 324
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+ GG P +L++ T P + YGMTET++ +T+ + G
Sbjct: 325 LGYGGAPAPPKLLERITELLPSRSPSNGYGMTETTA----LTINN-------------GG 367
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKP 406
V + + +P +G P P VE+K+ + VG + RG +V+L YW++ A
Sbjct: 368 V--DYLAKPD--SIGLPMPVVEVKIADPLGDELPAGEVGELCLRGPNVILGYWNRPEATA 423
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
G WL TGD+ +D+ G V++V R + GGENVY EVEA L +HP + + V
Sbjct: 424 ETFIGG-WLHTGDLARVDEEGFVFIVDRAKDMVIRGGENVYCAEVEAALFEHPAVDDVAV 482
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+GI + L E V A VRL S+E L+ RE+ + FK P
Sbjct: 483 IGIPHDELGEEVGAVVRLAAP------------------ASAEELQAFLRER-IAAFKIP 523
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVRREVM 554
F + P GKI + +R+EV+
Sbjct: 524 VRFWVRETELPRNPGGKILKTHLRKEVL 551
>gi|404420768|ref|ZP_11002502.1| long-chain-fatty-acid--CoA ligase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403659719|gb|EJZ14347.1| long-chain-fatty-acid--CoA ligase [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 502
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 218/528 (41%), Gaps = 94/528 (17%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI---GGIVAPLNYRWSF 93
+ Q + + E G+ GD VA+ A NS EWI+A I GG++ P+N R+
Sbjct: 44 ELAQRIRKASGAFAEFGVDKGDRVAVWAPNSA---EWIIAAFGIMAAGGVLVPVNTRFKT 100
Query: 94 KEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFV---NKRDM 148
EA+ + + + VM V G DF D+
Sbjct: 101 DEAADVVARSGAKAVM-------------------------VQKGFLGQDFTFVETGLDV 135
Query: 149 LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG 208
D+ + PFT AP + FTSGTTG PKG +++H + +
Sbjct: 136 PAIDLKSDFLASGKPFTRDVAPTDIADVIFTSGTTGRPKGAMMNHRQTLRAYEEWATLAD 195
Query: 209 YGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
E D YL P H GL + + A + GA V + F+ + +E +E +T L P
Sbjct: 196 LREGDRYLMINPYFHTFGLKAGLVASFLRGATMVPLAVFDVDNVVELIEHERITMLPGPP 255
Query: 268 AIMADLATLIRVKKTWKGRDSVKKI---LNGGGGLPSELMKEATNSFPKAKLISAYGMTE 324
+ L + RD + + + G +P EL++ P L++ YG+TE
Sbjct: 256 TLYHSLLAV-------SDRDRLATLRAGVTGAADIPVELVRRIREELPFQTLMTGYGLTE 308
Query: 325 TSSSLTFMTLYDPTLETPGQLPQAFGNVT---PNSVHQPQGVCVGKPAPHVELKVCSDGS 381
GNVT P + G P VE+++ D
Sbjct: 309 A------------------------GNVTLSRPGDSAEDVATTAGLPCEGVEVRIAEDTE 344
Query: 382 SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKS 441
+L RG +VM Y D A + WL TGD+G + G + +VGR+
Sbjct: 345 -----VLVRGYNVMQGYLDDPAATAEAIDADGWLHTGDLGEFTESGRLRIVGRKKDMFIV 399
Query: 442 GGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKN 501
GG N YP E+E LL+HP I + V+G+A+ R+ ++ A V LR+ +
Sbjct: 400 GGFNAYPAEIEGFLLEHPAIAQVAVIGVADERMGQVGKAFVVLRDEPGIAP--------- 450
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+ +E L RE+ + G+K PR +V + PL +TGK+ ++E+
Sbjct: 451 ----ILAEDLIAWSRER-MAGYKVPR-YVEFLDELPLNATGKVMKNEL 492
>gi|456369877|gb|EMF48777.1| Long-chain-fatty-acid--CoA ligase [Streptococcus parauberis
KRS-02109]
Length = 512
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 234/525 (44%), Gaps = 68/525 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q+ Q +NLA LL G+++GD VA+ + N + +++ A IG I PLN+R
Sbjct: 29 TFQEMNQRAINLADYLLLRGVKAGDRVALFSSNDIAHFDYLFACTKIGAIFIPLNWRLRD 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E + + P +L S + + T I + + + S S ++++ +
Sbjct: 89 TEIKQIVEDADPKLLAY-----SRIHKTRLTLIDENLFDLDIDSESY-----QEIVVSQT 138
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
K +R P E ++ +TSGTTG PKG +ISH A+ +L I D
Sbjct: 139 SKSIPIRDFP------DEDTAVLIYTSGTTGKPKGAMISHMAIRHNALVSIPSWNISASD 192
Query: 214 VYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMAD 272
+ T P+ H GL + +LM G + F + +E + T VP +
Sbjct: 193 RGMTTTPMFHTAGLFCFTIPILMAGGQIIVQRFFYTDETIEIIRDFKPTKAFFVPTMCYM 252
Query: 273 LATLIRVKKTWKGRDSVKKILNGGGGLPSELMK-EATNSFPKAKLISAYGMTETSSSLTF 331
LA KK + S+K I +GG L + + A P L+++YG+TE + F
Sbjct: 253 LADSKLFKK--ENFKSLKFINSGGAPLSENIFQLFADEGLP---LVNSYGLTEVGPNNFF 307
Query: 332 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGR 386
+T P+ + + + VGKP +K+ + VG+
Sbjct: 308 IT------------PE---------IQRIKPTAVGKPILFNTVKLVDENGQEVSDGEVGQ 346
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
++ YW+ A+ + + ++ TGD+ D G+ ++VGR I +GGENV
Sbjct: 347 LIINSEARFSGYWNN-QAETDKAIIDNFVYTGDLAKKDPEGDYFIVGRSKEMIITGGENV 405
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
YP EVE VL +HP ++ VV G+ A+ E VVA + L+E+ N ++L
Sbjct: 406 YPSEVENVLNKHPEVMDSVVFGLPTAQWGESVVAAIILKEA-------------NPQILD 452
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
S L+ H +E NL G+K P+ + FP T GKI R + +
Sbjct: 453 S---LKPHVQE-NLAGYKTPKRYYFLND-FPKTPIGKIDRKALEK 492
>gi|328957926|ref|YP_004375312.1| long-chain-fatty-acid--CoA ligase [Carnobacterium sp. 17-4]
gi|328674250|gb|AEB30296.1| long-chain-fatty-acid--CoA ligase [Carnobacterium sp. 17-4]
Length = 503
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 152/545 (27%), Positives = 237/545 (43%), Gaps = 83/545 (15%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
R ++V NR T ++ LA L + G+ GD VA+ + N Y + +LA +
Sbjct: 16 RTALVDPLKNREWTYKEVNLRAEKLAHYLKKNGVTKGDRVALYSPNDISYFDVLLASIKM 75
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G I PLN+R E + + +P ++ S S L L + +SL S
Sbjct: 76 GAIFIPLNWRLKPIEIKKVVEDAKP-KVILHSSQISERLSLIDVTL------LSLDVDSE 128
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
+ DI + + + S E ++ +T+GTTG PKG VI+H+ +I S
Sbjct: 129 KY--------NDICENINYEEF-HSESIELESPAMLIYTTGTTGHPKGAVITHNGMINNS 179
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHC 259
+ + +D+ + +AP+ HI G+S + +L++G + F+ ++A E ++++
Sbjct: 180 MNTVMSWNISHEDITIASAPMFHIAGISGIVIPLLLIGGKIIIDRFFDGENANEMIKRYK 239
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGR-DSVKKILNGGGGLPSELMKEATNSFPKAK--L 316
T L VP + LIR K KG +SV + GG S +KE N F + K L
Sbjct: 240 PTMLFMVPTM---YYGLIRAKNFSKGNLESVNTFVAGG----SPPLKEVVNYFVREKLPL 292
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
I++YG+TE P F +++ P +G P+ VE K+
Sbjct: 293 INSYGLTEAG-------------------PNNFKLTGESALKHP--FSIGYPSFFVEAKI 331
Query: 377 CSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD----TGDIGSIDDGG 427
D VG +L G H YW+ V T + + D TGD+ D+ G
Sbjct: 332 VDDNGEEVEQGQVGELLLAGQHTFAGYWNN-----EVETRKAFQDDYVRTGDLAKKDENG 386
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
++V R+ I +GGENV P EVE VL PG+ VVVG + + V A +
Sbjct: 387 LFYIVDRKKEMIITGGENVLPSEVEKVLNHLPGVKDSVVVGYEHPVYGQSVGAAII---- 442
Query: 488 WQWSESNCD-QSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
CD Q + EL H NL G+K P+ + L+ FP S GK +
Sbjct: 443 -------CDGQKIEVAEL--------DHYASANLAGYKTPKQY-LFLTAFPNNSVGKTDK 486
Query: 547 DEVRR 551
E+ R
Sbjct: 487 KEIIR 491
>gi|269926336|ref|YP_003322959.1| o-succinylbenzoate--CoA ligase [Thermobaculum terrenum ATCC
BAA-798]
gi|269789996|gb|ACZ42137.1| O-succinylbenzoate-CoA ligase [Thermobaculum terrenum ATCC BAA-798]
Length = 500
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 251/544 (46%), Gaps = 73/544 (13%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
N + GN T +Q +V+ LA L + G+ D +AI + S ++ + A I
Sbjct: 20 NHKALLYGNEVITYRQLYHNVVALASILAKKGVGPHDRIAILSKPSLNFIYAVHAAMQIS 79
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD 141
IV PLN R S +E + + +I+P +L+ D S+ L A +L S+D
Sbjct: 80 AIVVPLNTRLSREEVAYQLNTIKPRVLLVDSSN------LGKVANMAL-------CDSAD 126
Query: 142 FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
V D + + +S S + S P + I TSGTTG PKG+V+++ ++
Sbjct: 127 IV-LMDEMVLNSSPDHSFSSRDYFKSSDP---LAIIHTSGTTGKPKGIVLTYGNFWWNAV 182
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVT 261
+G D++L PL H+GG+S + ++ G+ + F+ +S +E+H VT
Sbjct: 183 GSALNIGATPQDIWLACMPLFHVGGMSIIIRSVIYGSSILLHEGFDPESVNYDIEKHDVT 242
Query: 262 SLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN-SFPKAKLISAY 320
L++V + M L +I + + ++ +L GGG + +L+ EA N P A Y
Sbjct: 243 -LLSVVSTM--LRRMIDSRNGVRYESRLRCVLLGGGPIQPDLVLEALNMGLPVAP---TY 296
Query: 321 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD- 379
GMTET+S + M P S + + G+P LKV +
Sbjct: 297 GMTETTSQIATM---------------------PPSEVRSRPSSSGRPIMPAVLKVFDEN 335
Query: 380 ----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 435
G + G I+ + YWD +GE TGD G IDD G ++++ RR
Sbjct: 336 RGYLGPNQEGEIVVEAPMLFSGYWDPKAGILPRESGE--FRTGDYGYIDDNGFLYVIDRR 393
Query: 436 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 495
+ I SGGEN+ P EVE+VL+ HP I V +A+ ++ VA V+L+ SN
Sbjct: 394 DDLIVSGGENISPVEVESVLMSHPEIDDACVTAVADQEWGQIPVASVKLKVG-----SN- 447
Query: 496 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR---DEVRRE 552
L+ E +R +C+ + L +KAP+ V++ + P + GK+ R E+ +
Sbjct: 448 ----------LTEEEVRSYCKSR-LASYKAPKR-VIFVESVPRNAAGKLLRSQVSEMHKR 495
Query: 553 VMSH 556
VMS
Sbjct: 496 VMSE 499
>gi|423609421|ref|ZP_17585282.1| hypothetical protein IIM_00136 [Bacillus cereus VD107]
gi|401251478|gb|EJR57754.1| hypothetical protein IIM_00136 [Bacillus cereus VD107]
Length = 518
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 243/535 (45%), Gaps = 56/535 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNRREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V ++ +S ++ + W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKEVESTVAMIERDFPNTSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + F + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDFCS---------MLYTSGTTGRPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++K+ L
Sbjct: 186 MAEHSMICTYFIKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTKTVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ VT+ P + L ++K D S+K + GG + L+KE
Sbjct: 246 IQEEKVTTFFAAPTMWNML-----LQKNLAEYDLTSMKIGVYGGAAMAPALVKECKERL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAE 352
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
VG I+ RG +M Y ++ A + S + W +GD+G D G +++
Sbjct: 353 PDDTLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVA 409
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R + + SGG N+YP E+E L HPG++ + V+G + E VVA V +++ +E
Sbjct: 410 DRVDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVV-VKKDENITE 468
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 469 AD----------------LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|381190931|ref|ZP_09898445.1| long-chain-fatty-acid-CoA ligase [Thermus sp. RL]
gi|380451277|gb|EIA38887.1| long-chain-fatty-acid-CoA ligase [Thermus sp. RL]
Length = 560
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 239/544 (43%), Gaps = 89/544 (16%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
A+GL ++G+R GD VAI N+ ++ GG+ +N ++ +E +
Sbjct: 64 FAQGLKDLGVRPGDRVAIMLPNTPQFVIAFYGTLLAGGVGVNVNPLYTPRELRHQLKDAG 123
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-----------KRDMLT--- 150
LV + +LE++ +P R V+ DF+ KRD L
Sbjct: 124 AETLVILDHLLPRFLEVEKE-VPVKRVVVT---GIKDFLPFPKNLLYPLKAKRDGLPLGF 179
Query: 151 ---------ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
A++LK R H+ PE ++ +T GTTG KG +++H L+ L
Sbjct: 180 PKREGFHAFAELLK----RPPAEPHASDPEDLALLQYTGGTTGLSKGAMLTHKNLVANVL 235
Query: 202 AKIA-------IVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALE 253
A +VG G V L P H+ G++ AM L G V +P+ E +E
Sbjct: 236 QIDAWDPTSKDLVGKG---VMLGALPFFHVYGMTVAMNYGLFSGYKIVLLPRPEIXXIVE 292
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
A+E+H VT VP + ++K + S++ L+G LP E+ K
Sbjct: 293 AIEKHXVTHFPGVPTLYVAFNNFPGIEK--RNVKSIRICLSGAAPLPVEVAKR-FEELTG 349
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
A+LI YG++E S +T +P L G + S+ G P P VE
Sbjct: 350 ARLIEGYGLSEASP----VTHSNPVL----------GLIKKGSI--------GMPFPSVE 387
Query: 374 LKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
KV + V G ++ +G +VM YW++ + + + WL TGD+ +D+ G
Sbjct: 388 AKVVDEEGKEVPMGEVGELIVKGPNVMKGYWNR-PEETEKALKDGWLYTGDMAKMDEDGY 446
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
++V R+ I +GG N+YP EVE VL QH + VVG+ + E V A + L+ +
Sbjct: 447 FYIVDRKKDMIIAGGYNIYPREVEEVLYQHEAVQEAAVVGVPDPYRGETVAAFLVLKXEY 506
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
+ + D + CR+ NL +K PR+ + +R+ P +S GKI R E
Sbjct: 507 RGKVTEKD--------------IEAFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILRRE 550
Query: 549 VRRE 552
+R E
Sbjct: 551 LREE 554
>gi|334346140|ref|YP_004554692.1| long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
gi|334102762|gb|AEG50186.1| Long-chain-fatty-acid--CoA ligase [Sphingobium chlorophenolicum
L-1]
Length = 561
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 234/542 (43%), Gaps = 74/542 (13%)
Query: 45 LARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
A GL +G+R GD VAI S N+EW + A A G ++ +N + E A+ +
Sbjct: 58 FAAGLFALGVRPGDRVAIWSPNNAEWTITQ-FATAKAGLVLVNINPAYRTSELEHALNKV 116
Query: 104 RPVMLVTDE---SSDSWYL--------------ELQHTAIPSLRWHVSLGSSSSD----F 142
L+T + SSD + +L+ +P+LR +++G + F
Sbjct: 117 GCAALITAQRFKSSDYVAMLQDIEPTLGSQAAGQLRLERLPALRTIITIGEARHPGCLPF 176
Query: 143 VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLA 202
+ TA+ + ++ TH+ P + I FTSGTTG PK +SH + A
Sbjct: 177 AEVAKLGTAE-HRHLVRQAQDATHASDP---INIQFTSGTTGLPKAATLSHRNITNNGFA 232
Query: 203 KIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCV 260
+ G G D PL H G+ + + P F++ + L AVE
Sbjct: 233 VGSAAGIGAGDRVCIPVPLYHCFGMVMGNLACLAHQATMVYPSAAFDAGAVLSAVENERC 292
Query: 261 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 320
L VP + +A L + +++ + G P E+M+E A + AY
Sbjct: 293 GFLYGVPTMF--IAALSHPEFARFDLSTLRGGIMAGSPCPVEIMRETIERMHMAGITIAY 350
Query: 321 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG 380
GMTETS ++F + T+E VT VG+ PH+E K+ +
Sbjct: 351 GMTETSP-VSFQSDMGDTIER---------RVT----------TVGRIQPHLESKIIDEA 390
Query: 381 SSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 435
V G + TRG VM+ YW + E W+ +GD+ +DD G +VGR
Sbjct: 391 GEIVPRGQPGELCTRGYSVMIGYWGDPEQTAAAIDSEGWMHSGDLAVLDDEGYCKIVGRS 450
Query: 436 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 495
I GGENVYP E+E L HP + + V+G+ + R E V A +R E SE
Sbjct: 451 KDMIIRGGENVYPREIEEFLHTHPAVQDVQVIGVPDDRYGEEVCAWIRCHEGAALSE--- 507
Query: 496 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
E LR CR + + +K PR ++ + + FP+T TGKI++ +R ++
Sbjct: 508 -------------EELRIFCRGR-IAHYKVPR-YIRFVRDFPMTVTGKIQKFAMRDAMVE 552
Query: 556 HL 557
L
Sbjct: 553 EL 554
>gi|423607307|ref|ZP_17583200.1| hypothetical protein IIK_03888 [Bacillus cereus VD102]
gi|401240648|gb|EJR47048.1| hypothetical protein IIK_03888 [Bacillus cereus VD102]
Length = 518
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 240/539 (44%), Gaps = 54/539 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWNEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSKKIDI----EINEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAK-PSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANVKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV----------- 459
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K E + ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 460 -----VKKDETITEAD-LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 511
>gi|359765490|ref|ZP_09269315.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
gi|359317070|dbj|GAB22148.1| putative acyl-CoA synthetase [Gordonia polyisoprenivorans NBRC
16320]
Length = 512
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 222/514 (43%), Gaps = 61/514 (11%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA L ++G+ GD VA+ + N YLE + A +G I+ PLN R + E + A+T
Sbjct: 42 LAHALADLGVGRGDRVALLSANHPAYLEALFAAGLLGAILVPLNARLTTPEVAYALTDSG 101
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
+L+ + + A + R V G D V + A LP
Sbjct: 102 ATVLIHSAALADVAIAAAAEAGATTRMVVD-GDPDPDAVGYETSIAA---ASTDRIDLPV 157
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
TH + I +TSGTTG+PKGVV++H + L I + D+V L APL H
Sbjct: 158 TH----DDPCFIMYTSGTTGNPKGVVLNHGTVTFAVLNPILDLDLRSDEVALVVAPLFHT 213
Query: 225 GGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTW 283
L+ ++ +L+ G V FE L + + VT VP ++ +++ W
Sbjct: 214 AALNFISLPILLKGGTVVIEEGFEPGRVLRVIAERNVTYGFGVPTMLDAMSS----HPDW 269
Query: 284 KGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLET 341
D S+++ + +P + T L YG+TET
Sbjct: 270 ASADLSSIRRWIVAAAPVPPRTLHTYTER--GIALCQGYGLTETG--------------- 312
Query: 342 PGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSSHV----GRILTRGAHVML 396
PG L +TP+ + G G P +++V DG G I +G++VM
Sbjct: 313 PGAL-----VLTPSHTARKLG-SAGVPHFFTDVRVVGPDGDETAPGERGEIQIQGSNVMA 366
Query: 397 RYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLL 456
YW++ A + T + W +GD+G DD G + +V R I SGGEN+YP EVEAV+L
Sbjct: 367 GYWNRPDATAAAFTDDGWFRSGDVGVRDDEGYITIVDRLKDMIISGGENIYPAEVEAVIL 426
Query: 457 QHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCR 516
PG++ V G+ + + W E C + L+ E L
Sbjct: 427 SMPGVVACGVFGVPDDK----------------WGEVGCAAITLADGATLTYEQLAAFLG 470
Query: 517 EKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E+ L +K P+ VL + P +TGKIR+D +R
Sbjct: 471 ER-LARYKIPKSMVLLEE-IPRNATGKIRKDRLR 502
>gi|375142211|ref|YP_005002860.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359822832|gb|AEV75645.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 517
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 157/563 (27%), Positives = 251/563 (44%), Gaps = 74/563 (13%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
Q I Q ++R + + I+ H T + +A L+ +G+R GD VA+ +
Sbjct: 2 QLGIGQWVTRRSLLNGGRTALISNGEHITYADLDRRTNQVAAALITLGVRRGDRVAVLLV 61
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA 125
NS ++E +L+ A IG + PLN R + E + +LV E L Q T
Sbjct: 62 NSTEFIEVLLSCAKIGALAVPLNVRLAGLEIGYILADSGADILVFHEQ-----LAAQATR 116
Query: 126 I---PSLR-WHV--SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
P +R HV + G + + D+++A + P I +T
Sbjct: 117 AVTEPGVRVRHVVRAGGVPAPGELGYEDVVSAGAPE-------PLGGDVDGRDPAFIMYT 169
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVG 237
SGTTG PKG +++H L+ ++ + +G +DV + AP+ HIGGL + +L VG
Sbjct: 170 SGTTGRPKGAILTHDNLLWNAINVLGTDIGLRGEDVTVAVAPMFHIGGLGVHILPLLYVG 229
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
V +P FE ++ L+A+ H VT VPA+ L + +++ + GG
Sbjct: 230 GASVIMPSFEPRATLQAMADHHVTVQFMVPAMWTALTQVPDFDSF--NLSALRFAMGGGS 287
Query: 298 GLP---SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
+P + M+E F + +GMTET+ +T +
Sbjct: 288 PVPLTVIDFMRERGVPFTEG-----FGMTETAPLVTVLD--------------------A 322
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVS 409
++ + G +G+ A HV+ ++ D VG ++ RG +V YW + A
Sbjct: 323 ENISKRAG-SIGRVAMHVDARIVDDDDRDVATDTVGELIVRGPNVFAGYWMKAEASAEAL 381
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
G W TGD+G +D G + LV R+ I SGGENVYP EVE VL +HP ++ V+G
Sbjct: 382 RGG-WFHTGDLGRMDAEGYITLVDRKKDMIISGGENVYPIEVEQVLFRHPAVLDAAVIGG 440
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+++ E VVA V + Q S+E + CRE+ L FK PR
Sbjct: 441 KDSKWGERVVAIVVADPATQAP---------------SAEEIVAWCRER-LAHFKCPR-D 483
Query: 530 VLWRKPFPLTSTGKIRRDEVRRE 552
V + P +TGK+ + E+R +
Sbjct: 484 VHFVAELPRNATGKLLKTELRAQ 506
>gi|282164394|ref|YP_003356779.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
gi|282156708|dbj|BAI61796.1| putative acyl-CoA synthetase [Methanocella paludicola SANAE]
Length = 569
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 246/563 (43%), Gaps = 81/563 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFI 80
+++V++ + T ++F ++ +A+GLL +G + GD VAI A N +EW + + A A
Sbjct: 38 DAMVSLQQGKRYTYREFQKETNRIAKGLLSLGFKKGDRVAIWATNIAEWVMVQV-ATAKA 96
Query: 81 GGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL---------- 129
G I+ +N + E ++ S +L+ D S Y+ + + P L
Sbjct: 97 GIIMINVNPAYRTHELEYVLSQSETQALLLIDRFKTSDYVGMVNEVCPELKTSKPGQLNC 156
Query: 130 ------------RWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 176
R G + D F+ D L +L G SL F + + I
Sbjct: 157 ENLPFLKTVILIRGEKQPGMLTWDEFLKMGDELPDGVLCGLQC-SLDF------DDPINI 209
Query: 177 CFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV 236
+TSGTTG PKGVV++H L+ + + + D P H G+ + M
Sbjct: 210 MYTSGTTGFPKGVVLTHHNLVNNGYFIGECMRFTDKDRLCIPVPFYHCFGMVLSNLACMT 269
Query: 237 GACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
+ IP F+ S L A+E+ T++ VP + +A L +++ +
Sbjct: 270 HGATMVIPAEYFDPISTLTAIEKERCTAVHGVPTMF--IAELEHPDFNKFNLKTLRTGIM 327
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G P E M++ + ++++ YG TE+S LT + +DP
Sbjct: 328 AGSPCPIEYMRKVSTLMNMSEIVITYGQTESSPGLTMSSTHDPL---------------- 371
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSV 408
+ + VG+P PH ELK+ + + G I RG +M Y+ A
Sbjct: 372 ----EKRVSTVGQPMPHCELKIVDPKTGKMVPRGQPGEICARGYMIMRGYYKNKEATDLA 427
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
E WL TGD+G++DD + GR + GGEN+YP EVE L +HP I + V+G
Sbjct: 428 VDEEGWLHTGDLGTLDDEDYCKITGRLKDMVIRGGENIYPREVEEFLYEHPAISDVQVIG 487
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + + E + A ++L KN ++ E+ + C+ K + +K PR
Sbjct: 488 VPDMKYGEELCAWIKL---------------KNGSVMTPDEI-KAFCKGK-IAHYKIPR- 529
Query: 529 FVLWRKPFPLTSTGKIRRDEVRR 551
++ + FP+T +GKI++ ++R
Sbjct: 530 YIKFADEFPMTISGKIQKYKMRE 552
>gi|423577275|ref|ZP_17553394.1| hypothetical protein II9_04496 [Bacillus cereus MSX-D12]
gi|401205775|gb|EJR12576.1| hypothetical protein II9_04496 [Bacillus cereus MSX-D12]
Length = 518
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 240/539 (44%), Gaps = 54/539 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWNEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSKKIDI----EINEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAK-PSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANVKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV----------- 459
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K E + ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 460 -----VKKDETITEAD-LETYCKESDELADYKRPRHY-LFVNELPRNASGKLQKFVLRE 511
>gi|457093986|gb|EMG24541.1| Long-chain-fatty-acid-CoA ligase [Streptococcus parauberis
KRS-02083]
Length = 512
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/525 (27%), Positives = 235/525 (44%), Gaps = 68/525 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q+ Q ++LA LL G+++GD VA+ + N + +++ A IG I PLN+R
Sbjct: 29 TFQEMNQRAIDLADYLLLRGVKAGDRVALFSSNDIAHFDYLFACTKIGAIFIPLNWRLRD 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E + + P +L S + + T I + + + S S ++++ +
Sbjct: 89 TEIKQIVEDADPKLLAY-----SRIHKTRLTLIDENLFDLDIDSESY-----QEIVVSQT 138
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
K +R P E ++ +TSGTTG PKG +ISH A+ +L I D
Sbjct: 139 SKSIPIRDFP------DEDTAVLIYTSGTTGKPKGAMISHMAIRHNALVSIPSWNISASD 192
Query: 214 VYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMAD 272
+ T P+ H GL + +LM G + F + +E + T VP +
Sbjct: 193 RGMTTTPMFHTAGLFCFTIPILMAGGQIIVQRFFYTDETIEIIRDFKPTKAFFVPTMCYM 252
Query: 273 LATLIRVKKTWKGRDSVKKILNGGGGLPSELMK-EATNSFPKAKLISAYGMTETSSSLTF 331
LA KK + S+K I++GG L + + A P L+++YG+TE + F
Sbjct: 253 LADSKLFKK--ENFKSLKFIISGGAPLSENIFQLFADEGLP---LVNSYGLTEVGPNNFF 307
Query: 332 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGR 386
+T P+ + + + VGKP +K+ + VG+
Sbjct: 308 IT------------PE---------IQRIKPTAVGKPILFNTVKLVDENGQEVSDGEVGQ 346
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
++ YW+ A+ + + ++ TGD+ D G+ ++VGR I +GGENV
Sbjct: 347 LIINSEARFSGYWNN-QAETDKAIIDNFVYTGDLAKKDPEGDYFIVGRSKEMIITGGENV 405
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
YP EVE VL +HP ++ VV G+ A+ E VVA + L+E+ N ++L
Sbjct: 406 YPSEVENVLNKHPEVMDSVVFGLPTAQWGESVVAAIILKEA-------------NPQILD 452
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
S L+ H +E NL G+K P+ + FP T GKI R + +
Sbjct: 453 S---LKPHVQE-NLAGYKTPKRYYFLND-FPKTPIGKIDRKALEK 492
>gi|288922476|ref|ZP_06416661.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
gi|288346175|gb|EFC80519.1| AMP-dependent synthetase and ligase [Frankia sp. EUN1f]
Length = 525
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 231/517 (44%), Gaps = 64/517 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
+A L++ G+++GD VA+S N ++ + G +V PL+ + +E S ++
Sbjct: 40 VASALVDRGIKAGDRVALSCPNLPYFPVVYYGILKAGAVVVPLSILLTEREISYHLSDSG 99
Query: 105 PVMLVTDESSDSWYLELQHTA----IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLR 160
E +D + + A P V L ++D + + + L ++
Sbjct: 100 ARAFFCFEGTDDLPMGERGLAAFDSTPGCDLFVLL---AADLAAQTGRVPGETLLQFAQT 156
Query: 161 SLP---FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLH 217
P H+ + AV++ +TSGTTG+PKGV ++HS L+ +L + DD+ L
Sbjct: 157 GSPDFATRHTVETDTAVVL-YTSGTTGNPKGVELTHSNLVHNALMCGRLFNVQADDIQLV 215
Query: 218 TAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATL 276
PL H G + M GA V +P+F ++ AL+ +E+ VT + VP + A L
Sbjct: 216 ALPLFHTFGQTVHMNCGFATGATLVLLPRFTAEKALDLIERENVTVFVGVPTMY--WALL 273
Query: 277 IRVKKTWKGRDSVKKILN----GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
V T +V+ L GG LP E++ F ++ YG++ETS TF
Sbjct: 274 NHVATTGYDASAVRANLRLAVAGGSSLPMEVLTSFEERF-GVPVLEGYGLSETSPVATFN 332
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRI 387
L P PG +G P VE+++ D S+ G I
Sbjct: 333 RLDRP--RRPGS--------------------IGLPVWGVEIRISRDDSTEAAVDEPGEI 370
Query: 388 LTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
RG +VM Y ++ A + W TGDIG+ D G +++V R+ I GG NVY
Sbjct: 371 CVRGHNVMKGYLNRPEATAEAIDPQQWFHTGDIGTRDADGYIYVVDRKKDMIIRGGFNVY 430
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLS 507
P EVE VLL HP + V+G+ + E V A V LR D + KEL+
Sbjct: 431 PREVEEVLLTHPAVSLAAVIGVPHPSHGEEVKAFVVLR---------ADAEATEKELV-- 479
Query: 508 SEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
CRE + +K PR+ V + + P+T+TGKI
Sbjct: 480 -----DWCREV-MAAYKYPRI-VEFMESLPMTATGKI 509
>gi|197123507|ref|YP_002135458.1| AMP-binding domain-containing protein [Anaeromyxobacter sp. K]
gi|196173356|gb|ACG74329.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. K]
Length = 546
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/553 (26%), Positives = 246/553 (44%), Gaps = 67/553 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R+++V++ T +QF ++ +ARGLL G++ GD V I A N EW++ A
Sbjct: 34 RDALVSVYQGYRATYRQFWEETSLVARGLLVRGVKKGDRVGIWAPNR---YEWVVIQYAS 90
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E A+ S +L+ ++ Y+ + P LR +
Sbjct: 91 ARIGAILVNINPAYRVHELEYALKQSGVSTLLLARTFRNADYVAMVRDVRLRCPELRQTI 150
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ + + + L R L F + + I +TSGTTG PKG +SH
Sbjct: 151 VIDDEWGALKHDALRFSEEELARLE-RDLQF------DDPINIQYTSGTTGFPKGATLSH 203
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSA 251
++ + Y + D P H G+ A MA+ GA V + F+ +
Sbjct: 204 HNIVNNGFFIGEFLRYTDADRVCIPVPFYHCFGMVLANMAITTHGAAMVIPLDNFDPLTV 263
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
+ V+Q T+L VP + +A L + S++ + G P E+MK+
Sbjct: 264 MRTVQQERCTALYGVPTMF--IAELDHPEFQAFDFSSLRTGIMAGSPCPVEVMKKVQKDM 321
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T DP + + VG+ PH
Sbjct: 322 HMPEVTICYGMTETSPVSTQSRTDDPL--------------------EKRVTTVGQVHPH 361
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSID 424
VE+K+ + + G + TRG VML YW D + ++ G W+ TGD+ +ID
Sbjct: 362 VEIKIVDPTTGRIVPRGTPGELCTRGYSVMLGYWRDPHATREAIDDGR-WMHTGDLATID 420
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR + GGEN++P EVE L PG+ + V+G+ + + E ++A V+L
Sbjct: 421 EHGYVKIVGRIKDMVLRGGENIFPREVEEFLYTIPGVSDVQVIGVPDVKYGEELMAWVKL 480
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R + L+ + +R +C+ K T +K PR + + FP+T +GK+
Sbjct: 481 RPG----------------VSLTGDEMRAYCKGKIAT-YKIPRYY-KFVDAFPMTVSGKV 522
Query: 545 RRDEVRREVMSHL 557
++ ++R + L
Sbjct: 523 QKYKMRETAIQEL 535
>gi|448353053|ref|ZP_21541831.1| long-chain-fatty-acid--CoA ligase [Natrialba hulunbeirensis JCM
10989]
gi|445641120|gb|ELY94203.1| long-chain-fatty-acid--CoA ligase [Natrialba hulunbeirensis JCM
10989]
Length = 522
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 157/568 (27%), Positives = 246/568 (43%), Gaps = 67/568 (11%)
Query: 1 MANYSQ--AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGD 58
M+NY+ + Q + R R++++ + T +F + V +A L E G+ GD
Sbjct: 1 MSNYTTIGDTLEQTVERYP--DRDAIIDPRAEQRFTYAEFDERVNRVANALRERGIEKGD 58
Query: 59 IVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWY 118
VA NS ++ + A A IG + PLN+R E + +LV E +
Sbjct: 59 RVATVLHNSNEFVLTVYACAKIGAVFTPLNFRLPGGEIEYIVNDAEAELLVF-EGATREA 117
Query: 119 LELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICF 178
+E A+ S+ +V + + D ++L+ S + P + A +
Sbjct: 118 VEAARPALESVDDYVYIDEDVPSYATAFD----EVLE--SGAADPPEVDVDEDDAYAFIY 171
Query: 179 TSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVG 237
TSGTTG PKGVV H +++ +L IA + DDV L PL H L + + G
Sbjct: 172 TSGTTGRPKGVVHEHRSMVDHNLLCIAEMNVTRDDVGLSVMPLYHCAELHCNLFPRVQRG 231
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
A V +FE ++ALEA+E++ V+ L P L+ + + S++ L G
Sbjct: 232 ATTVIHHEFEPQAALEAIEEYDVSLLFAAPTAWNALS--LTAAELDVDVSSLRIGLYGAA 289
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P ++++ + + AYGMTE P + Q P
Sbjct: 290 PMPEQVLENCRTQLCE-DYLQAYGMTEIG---------------PAGVIQ-----RPADQ 328
Query: 358 HQPQGVCVGKPAPHVELKVC---SDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV- 408
+ QG C G PA + E+++ +D HV G IL M YW++ A
Sbjct: 329 LEKQG-CAGLPALNHEVRIVEPDADPDEHVSQGEIGEILIASPCTMREYWNRPEATAQSL 387
Query: 409 --STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
G W TGD+G DD G +++V R++ I SGGEN+YP EVE VL H G+ V
Sbjct: 388 REHQGTTWYYTGDLGYRDDDGYLYVVDRKDDMIVSGGENIYPAEVEDVLFAHDGVEEAAV 447
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE-KNLTGFKA 525
VG + E VVA V E+ D + L + RE + L FK
Sbjct: 448 VGEPDEEWGERVVAYV-------VGENGVDATG-----------LDAYARESEQLADFKR 489
Query: 526 PRLFVLWRKPFPLTSTGKIRRDEVRREV 553
PR +V + P +GK+++ ++R V
Sbjct: 490 PREYVFVDE-LPKNPSGKVQKFKLREPV 516
>gi|359441402|ref|ZP_09231302.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20429]
gi|358036872|dbj|GAA67551.1| long-chain-fatty-acid--CoA ligase [Pseudoalteromonas sp. BSi20429]
Length = 577
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 140/551 (25%), Positives = 244/551 (44%), Gaps = 70/551 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++V LA GLL +G++ G+ V I S N EW L A A IG I+ +N +
Sbjct: 64 TYKEFQKEVNQLAMGLLALGVKPGERVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYR 122
Query: 93 FKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLRWHVSL 135
E A+ S+ L+T + S YLE L A+P+L+ + +
Sbjct: 123 PNELQYALNSVECSTLITASNFKGSDYLEMLNGLAPELATCDKDTLNLKALPTLKNIIRI 182
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G +S + + + + L + E + I FTSGTTG+PKG ++H
Sbjct: 183 GDEASPGMYSFNDVINLPTPAHELELKAIGANLNAEQDINIQFTSGTTGNPKGATLTHKN 242
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALE 253
++ +L + + DD PL H + + + P F++K+ L+
Sbjct: 243 ILNNALFVAESMHFTSDDKLCIPIPLYHCFAMVLGSLLCVSKGAAAIYPGDSFDAKTTLD 302
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSF 311
V+Q T+L VP + L + D +++ + G P ++M++
Sbjct: 303 VVQQEGCTALHGVPTMFISELEL----SNFNDYDLSTLRTGVMAGSTCPEQVMRKVQTQM 358
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
+++ AYG TE S + +T D ++E Q VG+ H
Sbjct: 359 NMHQVLIAYGQTE-CSPINNITETDSSIER-------------------QVTTVGRALAH 398
Query: 372 VELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+K+ + + G + ++GA +M YW+ + WL +GD+G +D
Sbjct: 399 TEVKIIDELGNIQQIGQPGEVCSKGAGIMRCYWNDDAKTKATIDDNGWLHSGDLGVMDTE 458
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G V +VGR I GGEN+YP E+E VL +PGI + GI + R E V A ++ +E
Sbjct: 459 GFVTIVGRIKDMIIRGGENIYPREIEEVLYTYPGIQDAAIFGITDERYGEEVCAWIQPKE 518
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ +L + +R+ +++ L FK PR + + + +P+T TGK+++
Sbjct: 519 ----------------DAVLDEQAIREFLKDE-LAYFKMPR-HIRFVENYPMTVTGKLQK 560
Query: 547 DEVRREVMSHL 557
++R ++ L
Sbjct: 561 FKMREQMQEEL 571
>gi|336235213|ref|YP_004587829.1| long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362068|gb|AEH47748.1| Long-chain-fatty-acid--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 544
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 242/548 (44%), Gaps = 76/548 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +QF +ARG + +G+ G+ VAI A N +L A +G ++ +N +
Sbjct: 33 TYKQFDDYCRLVARGFIGLGIEKGEHVAIWATNVPEWLACQFATGKMGAVLVTVNTNYRA 92
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYL----------------ELQHTAIPSLRWHVSLG 136
E + S +L+ + DS Y+ +LQ +P L+ + +G
Sbjct: 93 AELEYLLKQSDSTTLLLIERYRDSSYIDILYEIAPELRECKPGQLQSKRLPKLKNVIVIG 152
Query: 137 SSSSDFV---NKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
N L D+ + + + +S P + + +TSGTTG PKGV+++H
Sbjct: 153 DKRYPGAYTWNDLLALAHDVTEEQLDKQM---NSLDPHDVINMQYTSGTTGFPKGVMLTH 209
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSAL 252
++ + + ++D P H G + +A + VGA V I +F K L
Sbjct: 210 YNIVNNAYNIAQCMKLTKEDRLCIPVPFFHCFGCVLGTLACVSVGATMVPIQEFNPKQVL 269
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+ V+ T+L VP + +A L S++ + G P E+MK
Sbjct: 270 QTVQDEKCTALHGVPTMF--IAELNDPDFEKYDLSSLRTGIMAGSPCPIEVMKAVMEKMG 327
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
++ AYG TE+S +T DP +ET VG+
Sbjct: 328 AKEITIAYGQTESSPVITQTRTDDPIHIRVET-----------------------VGRAL 364
Query: 370 PHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
P+VE+K+ ++ G + TRG HVM Y+ A V + WL TGD+ +
Sbjct: 365 PNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKNPGATKEVIDEDGWLHTGDLAVM 424
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G + GR I GGEN+YP E+E L +HP I+ + VVG+ + + E V+A +
Sbjct: 425 DENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEVMAWII 484
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
L+E Q++ ++E +R+ CR K ++ K PR ++ + +P+T++GK
Sbjct: 485 LKEG---------QTA-------TAEEIREFCRGK-ISRHKIPR-YIEFTDSYPMTASGK 526
Query: 544 IRRDEVRR 551
I++ ++R
Sbjct: 527 IQKFKLRE 534
>gi|254250970|ref|ZP_04944288.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
gi|124893579|gb|EAY67459.1| Acetyl-coenzyme A synthetase 1 [Burkholderia dolosa AUO158]
Length = 575
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 151/555 (27%), Positives = 244/555 (43%), Gaps = 76/555 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F ++ LA GL +G+ GD V I + N SEW L A A IG I+ +N +
Sbjct: 60 TWREFADEIDVLAAGLAALGIVKGDRVGIWSPNRSEWLLTQ-FATARIGAILVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ + S Y+E+ T +PSLR VS+
Sbjct: 119 LAELEYALNKVGCKAVIAAERFKSSAYVEMLQTIAPELATATPGDLHAARVPSLRTIVSM 178
Query: 136 GS-SSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
+ V D++ S + A + I FTSGTTGSPKG ++H
Sbjct: 179 SDVAPPGMVRFADVIARGRRAVDSALLDAIGATLASTDPINIQFTSGTTGSPKGATLTHR 238
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSAL 252
++ + + + + E D PL H G+ A +A + GA VF + F+ + L
Sbjct: 239 NVVNNARSIARAMRFTEHDSLCIPVPLYHCFGMVLAVLACVSTGAAMVFPGEAFDPVATL 298
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
AV + T+L VP + +A L + +++ + G P E MK +
Sbjct: 299 AAVAEERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMKRVVSQMH 356
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
+++ AYGMTETS P +F + T + + + + VG+ PH+
Sbjct: 357 LSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRIQPHL 396
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGDIGSI 423
E+K+ V G + T+G VML YWD T EV W+ TGD+ ++
Sbjct: 397 EVKIIDPSGDIVPVGATGELCTKGYSVMLGYWDD-----DAKTREVLIDGWMHTGDLATL 451
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G +VGR + GGENVYP E+E L +HP I V G+ + + E + A +
Sbjct: 452 DADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDPKYGEELCAWIV 511
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
LR + Q +E + +R C + + +K PR ++ + P+T TGK
Sbjct: 512 LRANEQMTEDD----------------VRAFC-QGQIAHYKIPR-YIRFVDELPMTVTGK 553
Query: 544 IRRDEVRREVMSHLK 558
+++ +R ++ LK
Sbjct: 554 VQKFVMRERMIDELK 568
>gi|312110768|ref|YP_003989084.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|311215869|gb|ADP74473.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
Length = 544
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/551 (26%), Positives = 242/551 (43%), Gaps = 82/551 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +QF +ARG + +G+ G+ VAI A N +L A +G ++ +N +
Sbjct: 33 TYKQFDDYCRLVARGFIGLGIEKGEHVAIWATNVPEWLACQFATGKMGAVLVTVNTNYRA 92
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTAD 152
E + S +L+ + DS Y+++ + P LR G S + K L
Sbjct: 93 AELEYLLKQSDSTTLLLIERYRDSSYIDILYEIAPELR-ECKPGQLQSKRLPK---LKNV 148
Query: 153 ILKGYSLRSLPFTHSW----------------------APEGAVIICFTSGTTGSPKGVV 190
I+ G + P ++W P + + +TSGTTG PKGV+
Sbjct: 149 IVIGD--KRYPGAYTWNDLLALAHDVPEEQLDEQMDSLDPHDVINMQYTSGTTGFPKGVM 206
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESK 249
++H ++ + + ++D P H G + +A + VGA V I +F K
Sbjct: 207 LTHYNIVNNAYNIAQCMKLTKEDRLCIPVPFFHCFGCVLGTLACVSVGATMVPIQEFNPK 266
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
L+ V+ T+L VP + +A L S++ + G P E+MK
Sbjct: 267 QVLQTVQDEKCTALHGVPTMF--IAELNDPDFEKYDLSSLRTGIMAGSPCPIEVMKAVME 324
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQAFGNVTPNSVHQPQGVCVG 366
++ AYG TE+S +T DP +ET VG
Sbjct: 325 KMGAKEITIAYGQTESSPVITQTRTDDPIHIRVET-----------------------VG 361
Query: 367 KPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ P+VE+K+ ++ G + TRG HVM Y+ A V + WL TGD+
Sbjct: 362 RALPNVEVKIVDPSTNKEVPPGVQGELCTRGYHVMKGYYKNPGATKEVIDEDGWLHTGDL 421
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
+D+ G + GR I GGEN+YP E+E L +HP I+ + VVG+ + + E V+A
Sbjct: 422 AVMDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKILDVQVVGVPDEKYGEEVMA 481
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
+ L+E Q++ ++E +R+ CR K ++ K PR ++ + +P+T+
Sbjct: 482 WIILKEG---------QTA-------TAEEIREFCRGK-ISRHKIPR-YIEFTDSYPMTA 523
Query: 541 TGKIRRDEVRR 551
+GKI++ ++R
Sbjct: 524 SGKIQKFKLRE 534
>gi|229199880|ref|ZP_04326469.1| Acyl-CoA synthase [Bacillus cereus m1293]
gi|228583599|gb|EEK41828.1| Acyl-CoA synthase [Bacillus cereus m1293]
Length = 516
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 240/539 (44%), Gaps = 54/539 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWNEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNAASSKKIDI----EINEMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAK-PSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A S+ G W +GD+G D G +++
Sbjct: 353 DVLP--PYEVGEIILRGPTMMAGYHNREEANVKSMYKG--WYHSGDLGYFDKDGYLFVAD 408
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 409 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV----------- 457
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K E + ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 458 -----VKKDETITEAD-LETYCKESDELADYKRPRHY-LFVNELPRNASGKLQKFVLRE 509
>gi|39934832|ref|NP_947108.1| long-chain-fatty-acid--CoA ligase [Rhodopseudomonas palustris
CGA009]
gi|39648682|emb|CAE27204.1| putative long-chain-fatty-acid CoA ligase [Rhodopseudomonas
palustris CGA009]
Length = 525
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/558 (26%), Positives = 240/558 (43%), Gaps = 66/558 (11%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A + + A + N + R +T F + +AR L G++ + +A N
Sbjct: 8 ATLADVIRAQANTRGNEIAYEFEGRISTFADFDRHTNQVARALQASGVQPNERIAYLGKN 67
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI 126
S+ Y E ++AP+N+R + E + + + +L L+ I
Sbjct: 68 SDIYFELWSGAIKAKAVMAPVNWRLAGPEIAYIVEDCKAAILFVGPEFVDQVCGLKDQ-I 126
Query: 127 PSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
PS+R ++ + DF RD ++D + + AP I +TSGTT
Sbjct: 127 PSVRHIITTEGGAPEWQDFTKWRDAQSSDDPQ----------VAIAPSDIAIQLYTSGTT 176
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGE------DDVYLHTAPLCHIGGLSSAMAMLMVG 237
G PKG ++SH+ + SL + E DDV L P+ HIGG M + G
Sbjct: 177 GKPKGAMLSHANFL--SLVRAGQDNKPEWNRWSPDDVSLVAMPVFHIGGSGWGMMGIYHG 234
Query: 238 ACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
A V +F+ L+ EQ +T L VPA M + R ++ R +K +L G
Sbjct: 235 AKGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAREVDFSR--LKYMLYGAS 292
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P+ L+KE + F K + YGMTET+ ++ + D +E ++ A
Sbjct: 293 PIPAALLKECIDVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA--------- 341
Query: 358 HQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGE 412
GK P VE+ + DG VG I TR M+ YW+ A G+
Sbjct: 342 --------GKALPGVEIAILDPDGKPLPPRQVGEIATRSGSNMVGYWNLPDATKKTIDGD 393
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
WL TGD G +D+ G V++ R I SGGEN+YP EVE+ + HP + + VVG+ +
Sbjct: 394 NWLRTGDAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESAICDHPDVAEVAVVGVPDD 453
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A V ++ + + + ++ + + G+K P+ + +
Sbjct: 454 QWGESVKAVVVMKPGKEATAQDIIGFTRTR-----------------IAGYKTPKS-IDF 495
Query: 533 RKPFPLTSTGKIRRDEVR 550
P ++GKI R ++R
Sbjct: 496 IPALPRNASGKILRRQLR 513
>gi|295706818|ref|YP_003599893.1| long-chain-fatty-acid--CoA ligase [Bacillus megaterium DSM 319]
gi|294804477|gb|ADF41543.1| long-chain-fatty-acid--CoA ligase [Bacillus megaterium DSM 319]
Length = 565
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 154/585 (26%), Positives = 252/585 (43%), Gaps = 71/585 (12%)
Query: 3 NYSQAHICQCLSR-IAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVA 61
+Y Q ++ Q + + S + G + T Q QD L L+ L+E+GL+ GD VA
Sbjct: 23 HYEQKNLAQLFEEAVQKDPKKSAIYFLGKKM-TFSQLHQDSLKLSSYLIELGLKRGDRVA 81
Query: 62 ISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWY--- 118
I N + AV GG+V N ++ +E + M++ + D Y
Sbjct: 82 IMLPNCPQAVISFYAVLLAGGVVVQTNPLYTERELEYQLNDSEATMII---ALDLLYPRV 138
Query: 119 ------LELQHTAIPSLRWHVSLGSSS-SDFVNKRDML---------TADILKGYSLRSL 162
+++H I S++ ++ + F+ ++ T + K S
Sbjct: 139 VKMKALTKIKHVVITSIQDYLPFPKNIIYPFIQRKQQKISVDVSHTETTHLFKRIINESS 198
Query: 163 PFT---HSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK---IAIVGYGEDDVYL 216
P + E I+ +T GTTG PKGV+++H L+ + + +GE+ V L
Sbjct: 199 PAVCNAEGISDEDIAILQYTGGTTGFPKGVMLTHKNLVANATMCSHWLYRCRHGEEKV-L 257
Query: 217 HTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLAT 275
P H+ GL++ + + ++ V +PKF++K+ L+ + + T P I L
Sbjct: 258 GIIPFFHVYGLTTVLVLSVLQNYEMVLLPKFDAKTTLKTIHKQQPTLFPGAPTIYIALLN 317
Query: 276 LIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLY 335
+ K S+ ++G LP E+ +E KL+ YG+TETS L+
Sbjct: 318 HPDLAKY--NLSSIDSCMSGSAPLPVEV-QEQFEKLTGGKLVEGYGLTETSPVTHANFLW 374
Query: 336 DPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVM 395
++P + G P++ + GK A S VG I +G VM
Sbjct: 375 KE------RIPGSIGVPWPDTDAKILSFETGKEA----------AVSEVGEIAVKGPQVM 418
Query: 396 LRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVL 455
YW Q +V + WL TGD+G +DD G ++V R+ I +GG N+YP EVE VL
Sbjct: 419 KGYWKQPEETEAVMR-DGWLLTGDVGYMDDKGYFYVVDRKKDIIIAGGYNIYPREVEEVL 477
Query: 456 LQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHC 515
+H I VVVG+ + E V A + L+ + +E ++ S+
Sbjct: 478 YEHEKIQEAVVVGVPDPYRGETVKAYIVLKNGVRCTEEELNEFSR--------------- 522
Query: 516 REKNLTGFKAPRLFVLWRKPFPLTSTGKI-RRDEVRREVMSHLKS 559
K L +K PRL+ +R P T+ GKI RR + E H K+
Sbjct: 523 --KYLAAYKVPRLYE-FRNELPKTAVGKILRRALIDEENEKHKKA 564
>gi|424855471|ref|ZP_18279772.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663223|gb|EHI43349.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 502
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 239/549 (43%), Gaps = 72/549 (13%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWY 70
+ + R A + + I G+ + Q + + A L E G+R GD V + N
Sbjct: 5 ELVERRAERQPHRTAIICGDERISYGQLLDRIRAAASFLTEQGVRPGDRVVCYSENRPEI 64
Query: 71 LEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRP-VMLVTDESSDSWYLELQHTAIPSL 129
L + A + +G + P+ + + + V+LV+ + D+ IP L
Sbjct: 65 LIALYASSRVGAVFTPVGIASPPADVGYILQDLAARVLLVSPHTVDAGREVPGVDGIPIL 124
Query: 130 RWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGV 189
+ K L L Y P H + A ++ +TSGT+G PKGV
Sbjct: 125 S------------LEKVHDLALPHLPAYVPGPAP-EHRPTADSAALVVYTSGTSGHPKGV 171
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFES 248
+SH AL + + + DDV L PL H+ L++ A+A L G + KF++
Sbjct: 172 TLSHGALFFNGVNTLLGLDIVADDVTLVNTPLSHVAALNTLAVATLHKGGTVILDSKFDA 231
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKE 306
L +EQ VT++ VP+++ TL+ + G D S++ IL GG +P EL+
Sbjct: 232 GRCLRQIEQFAVTTMFAVPSML----TLMAQDPGFAGADTASLRWILGGGAPMPPELVAS 287
Query: 307 -ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
A+ P ++++YG+TE S++F D L++
Sbjct: 288 WASRGVP---VLASYGLTEAGPSVSFRRSSDAALKS---------------------ASS 323
Query: 366 GKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
G PA +L++ SD S VG +L RG H+ YW A + + + WL +GD
Sbjct: 324 GTPALLTDLRIVSDDGSDLPPGQVGEVLVRGPHIASGYWGNETAT-AETFRQGWLASGDR 382
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G ID G++ + GR I +GGENV P E+E +++Q+PGI VVG + E++ A
Sbjct: 383 GFIDVDGDLCITGRSKEIIITGGENVDPAEIEHLVVQYPGIRDAAVVGRPDPVWGEIITA 442
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
V CD + + +EL Q L FK PR+ R+ P +
Sbjct: 443 VV-----------VCDDTVELEEL--------QQFLRPQLAKFKIPRILE-RRESLPRSP 482
Query: 541 TGKIRRDEV 549
GK+ R E+
Sbjct: 483 VGKLLRREL 491
>gi|398938415|ref|ZP_10667818.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
gi|398165963|gb|EJM54073.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
Length = 564
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 240/553 (43%), Gaps = 66/553 (11%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLN--YRW 91
T QQ + V A+ LL +GL++GD + I A N + A A IG I+ +N YR
Sbjct: 53 TWQQLAEAVDLHAKALLALGLQTGDRLGIWAPNCAQWCISQFASAKIGVILVNINPAYRS 112
Query: 92 SFKE-------------ASRAITSIRPVML--VTDESSDSWYLELQHTAIPSLRWHVSLG 136
S E A TS ML + E ++ +LQ +P LR +SL
Sbjct: 113 SELEYVLKQSGCQWLVCAGAFKTSDYHGMLQGLVPELAEQSIGKLQSERLPELRGVISLD 172
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
+ LT D+ S L HS + AV I +TSGTTG PKG +SH
Sbjct: 173 AQPPSGFLPWSQLT-DLAGNVSAEQLSERQHSLHFDQAVNIQYTSGTTGFPKGATLSHYN 231
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALE 253
++ +G D + PL H G+ M + P F+ L
Sbjct: 232 ILNNGYMVGESLGLTASDRLVIPVPLYHCFGMVMGNLGCMTHGSTMIYPNDAFDPLLTLT 291
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
AV + T+L VP + +A L + K+ S++ + G P E+M+ +
Sbjct: 292 AVAEEKATALYGVPTMF--IAMLDQPKRAEFDLSSLRTGIMAGATCPIEVMRRVISEMHM 349
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+++ AYGMTETS +L+T P+ + + VG+ P +E
Sbjct: 350 SEVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTVGRTQPQLE 389
Query: 374 LKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
K+ + + V G + TRG VML YW+ W+ TGD+ S++D G
Sbjct: 390 SKIIDEAGNLVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDLASMNDEGY 449
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
V + GR I GGEN+YP E+E HP + + V+GI +R E +VA
Sbjct: 450 VCIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIVA-------- 501
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
W + + S+ +E L+ C+E+ + FK PR F + FP+T TGKI++
Sbjct: 502 -WIKFHPGHSATEQE-------LQTWCKER-IAHFKTPRYFKFVDE-FPMTVTGKIQKFR 551
Query: 549 VRREVMSHLKSLP 561
+R + LK++P
Sbjct: 552 MREISIEELKAIP 564
>gi|148652394|ref|YP_001279487.1| AMP-binding domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571478|gb|ABQ93537.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 587
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 239/544 (43%), Gaps = 75/544 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T QQ Q LA ++ +GL+ GD V I S N+EW L LA A G I+ +N +
Sbjct: 73 TYQQLQQKSNQLASSMIRMGLQKGDRVGIWSHNNAEWLL-MQLATAKAGIILVNINPAYR 131
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA 151
E A+ + V++ S Y+++ P + + + N + ++
Sbjct: 132 ISELEYALNKVDCKVLVFMRHFKTSDYVQMVQQMAPEMCHQSYECLALNTLPNLKRLIWI 191
Query: 152 DILKGYSLRSLPFTH---SWAPEG------------------AVIICFTSGTTGSPKGVV 190
D S S F W EG A+ I FTSGTTG+PKG
Sbjct: 192 DAPN--SDESFGFMQKFSDWLAEGDADDPKLTERQNQLNANDAINIQFTSGTTGTPKGAT 249
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF-IPKFES 248
++H L+ + + +D PL H + + ML GA V+ F+
Sbjct: 250 LTHRNLLNNAYHLGETLCLTAEDKLCLPLPLYHCFAMVLGNLTMLSHGATLVYPSSSFDP 309
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
S L+A+ + T L VP++ LA L S++ ++GG P ELM+
Sbjct: 310 LSVLQAINEEKCTVLHAVPSMF--LAILNHPDFARFDLSSLRTGVSGGASCPRELMQRII 367
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
++L AYGMTETS T P + + + VG
Sbjct: 368 KQMHMSELTIAYGMTETSPKAT--------------------QTLPTTEFEKRIATVGVV 407
Query: 369 APHVELKVCS--DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PH+E+KV +G + VG ILT+G VM YW+ + K + + + W+ TGD+GS
Sbjct: 408 QPHLEVKVVDPLNGQTLPIGEVGEILTKGYAVMQGYWNDPV-KTAEAIVDGWMHTGDLGS 466
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D+ G + +VGR I GGEN+YP EVE L +HP I + +VG+ +A E++ A
Sbjct: 467 MDEHGYITVVGRSKDMIIRGGENIYPIEVENFLYRHPKIADVQIVGVPDAHYGEVLAA-- 524
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
W D++ L+ + +R C + + FK P ++ + + +P+T TG
Sbjct: 525 -------WIIPKADET-------LTEQEVRDFCYNQ-IAHFKIPT-YIRFVEQYPMTVTG 568
Query: 543 KIRR 546
KI++
Sbjct: 569 KIQK 572
>gi|126436245|ref|YP_001071936.1| long-chain-fatty-acid--CoA ligase [Mycobacterium sp. JLS]
gi|126236045|gb|ABN99445.1| AMP-dependent synthetase and ligase [Mycobacterium sp. JLS]
Length = 483
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 223/513 (43%), Gaps = 84/513 (16%)
Query: 46 ARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF----IGGIVAPLNYRWSFKEASRAIT 101
A ++G+ GD VAI A NS EWI+A AF GG++ P+N R+ +EA+ IT
Sbjct: 47 AGAFADLGIGKGDRVAIWAPNSA---EWIIA-AFGLLTAGGVLVPVNTRFKSEEAADVIT 102
Query: 102 SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYS 158
++ + +L +++ A +P + L +D L G
Sbjct: 103 RSGAKAVLVQQG----FLGVEYAAPEGVPVID------------------LKSDFLAG-- 138
Query: 159 LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT 218
PF+ + I FTSGTTG PKGV+++H + + + D YL
Sbjct: 139 --GEPFSRTVDGSDISDIIFTSGTTGRPKGVMMNHRQNLRLYEEWCNLADLRQGDRYLMV 196
Query: 219 APLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 277
P H G + + A + GA V +P F+ ++ + +T L P + L ++
Sbjct: 197 NPYFHTFGYKAGLIASFIRGATMVPVPVFDVDRVVDLIAAERITMLPGPPTLYHSLLSVA 256
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 337
K R V G +P EL++ P L + YG+TE ++
Sbjct: 257 DKSKLATLRAGV----TGAADIPVELVRRVLEELPFQTLATGYGLTEAGTA--------- 303
Query: 338 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLR 397
TL PG +F ++ VG VE+++ DG +L RG VM
Sbjct: 304 TLSRPG---DSFADIA---------TTVGTACDGVEVRIADDGE-----VLVRGYSVMQG 346
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
Y D A WL TGD+G++DD G + +VGR+ GG N YP E+E LL+
Sbjct: 347 YLDDPAATAEAIDPHGWLHTGDLGTLDDAGRLRIVGRKKDMFIVGGFNAYPAEIEGFLLE 406
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
HP + V+G+ + R+ ++ A V RE LS+E L RE
Sbjct: 407 HPDVAQAAVIGVPDERMGQVGKAFVVRREGHAEP--------------LSAEGLIAWSRE 452
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ + GFK PR +V + PL +TGK+ +D++R
Sbjct: 453 R-MAGFKVPR-YVEFLDELPLNATGKVMKDQLR 483
>gi|423123248|ref|ZP_17110931.1| hypothetical protein HMPREF9690_05253 [Klebsiella oxytoca 10-5246]
gi|376391075|gb|EHT03756.1| hypothetical protein HMPREF9690_05253 [Klebsiella oxytoca 10-5246]
Length = 529
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 253/555 (45%), Gaps = 72/555 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAF 79
+ ++V GN+ T + ++ V LA L G+++GD VA+ A N EW + I A++
Sbjct: 31 KEALVFDAGNQRMTFRGWLDSVDKLALELSRRGVKAGDPVALLAENRIEWPVAQI-AISA 89
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPV-MLVTDESSDSWYLELQ---HTAIPSLRWHVSL 135
+G I+ P+N + + + + V +L+++ S YL + H +PSLR
Sbjct: 90 LGAILVPVNTHFRDNDLRHVLDHSQVVAILLSERFRSSEYLAMVRAIHPQLPSLR----- 144
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
D +N DM +++ L L W+P I +TSGTTG PKG +
Sbjct: 145 -----DIINFDDMEYEAVMRQPVLAELT-EWVWSPRELASIQYTSGTTGRPKGAELCMEG 198
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG-LSSAMAMLMVGACHVFIPKFESKSALEA 254
+++ + + + E D + PL H G + + +A L GA ++ + F++ L
Sbjct: 199 IMMNAWGTVQRLEVTEMDRWTSIIPLFHCAGCIMNILACLTAGATYLGMRAFDAGQMLSL 258
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ T L VP + LA L + + S++ GG L+++ +FP
Sbjct: 259 IERERCTVLTGVPT--SYLAMLEHPDRPYFDLSSLRTGTCGGADCDPRLLEQCARAFPIN 316
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YG TE +S+L + + Q PQ F G P P VE+
Sbjct: 317 GLVQVYGQTE-ASTLIALDYW--------QSPQRFATA-------------GLPLPGVEV 354
Query: 375 KVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
+VC + +G++ RG VML Y + W++TGD+G ++ G
Sbjct: 355 QVCDPNTGVVLPHGEIGQLQVRGPMVMLGYHRDAEETARCIDPQGWMNTGDLGRLNIDGR 414
Query: 429 VWLVG-RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V LVG R I GGEN+YP E+E +L +HP I + V + + E+V A +
Sbjct: 415 VELVGGRLRDMIIRGGENIYPVEIENLLREHPSITEVAVFALPDKFYGEVVAAAI----- 469
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGKIRR 546
+S+K LS + +R+ C K + GFK P R+F + +P+TS+GKI +
Sbjct: 470 ---------ESTKP----LSKDEIRKACVGK-IAGFKHPARVFTIVE--WPMTSSGKILK 513
Query: 547 DEVRREVMS-HLKSL 560
++ + LK L
Sbjct: 514 RMLKTAALDGQLKEL 528
>gi|339010936|ref|ZP_08643505.1| putative acyl-CoA ligase YngI [Brevibacillus laterosporus LMG
15441]
gi|338772270|gb|EGP31804.1| putative acyl-CoA ligase YngI [Brevibacillus laterosporus LMG
15441]
Length = 553
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 144/533 (27%), Positives = 231/533 (43%), Gaps = 54/533 (10%)
Query: 44 NLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI-T 101
LARG + +G++ G+ +AI A N EW L A A IGG++ +N + E +
Sbjct: 46 QLARGFMALGIQPGEHIAIWANNVPEWVLTQ-FATAKIGGVLVTVNTNYRTHELEYLLHQ 104
Query: 102 SIRPVMLVTDESSDSWYL----------------ELQHTAIPSLRWHVSLGSSSSDFVNK 145
S +L+ D+ Y+ ELQ +P LR + LG +
Sbjct: 105 SDATTLLLIDQFKGVSYVDMLHEICPELQTATPGELQAERLPQLRRVIYLGEERQPGMYL 164
Query: 146 RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 205
L + + + P+ V + +TSGTTG PKGV++SH+ +I ++ +
Sbjct: 165 FKDLYELAEQVTEAEQIDCQKTIHPDSVVNMQYTSGTTGFPKGVMLSHNNIINNAIQVAS 224
Query: 206 IVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLI 264
++D P H G + +A + GA V I F+ K LE V + T+L
Sbjct: 225 CQNLHQEDRVCIPVPFFHCFGCVMGTLACVATGATMVPIITFQPKVVLEVVSKTRCTALY 284
Query: 265 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 324
VP + +A L S++ + G P E+MK + + AYG TE
Sbjct: 285 GVPTMF--IAELNDPTFAQYDLSSLRTGIMAGSPCPEEVMKNVVDKMGIRDITIAYGQTE 342
Query: 325 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV 384
+S +T T D ++E T H P + + P E+
Sbjct: 343 SSPVVT-QTRVDDSIE--------LRVSTVGRKHDPVEIKLMNPETGEEV-----ARGEQ 388
Query: 385 GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGE 444
G + TRG VM Y+ E WL TGD+ ++D+ G + GR I GGE
Sbjct: 389 GELCTRGYQVMKGYYKMPEQTAQAIDSEGWLHTGDLATVDESGYYRITGRLKDMIIRGGE 448
Query: 445 NVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKEL 504
N+YP E+E L H ++ + V+G+ + E V+ACV++RE E
Sbjct: 449 NIYPREIEEFLYTHLKVLDVQVIGVPDPHYGEQVLACVKVREG---------------ET 493
Query: 505 LLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
L S+E L+ C+ K + FK P +V +P+T++GKI++ ++R + + L
Sbjct: 494 LTSNE-LKDFCQGK-IARFKIP-YYVQIVSDYPMTASGKIQKYKLREQAIEIL 543
>gi|262201331|ref|YP_003272539.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
gi|262084678|gb|ACY20646.1| AMP-dependent synthetase and ligase [Gordonia bronchialis DSM
43247]
Length = 542
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 161/556 (28%), Positives = 251/556 (45%), Gaps = 69/556 (12%)
Query: 23 SVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAF 79
++V R T ++F ++V LA GLL +G+ GD V + + N EW+ A A
Sbjct: 36 ALVDAAAGRQWTYREFHREVRALAAGLLRLGVGVGDRVGVWSPNR---YEWVFTQYATAE 92
Query: 80 IGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA---IPSLRWHVS 134
IG I+ +N YR + E + A + I V++ + DS Y ++ A P LR V
Sbjct: 93 IGAILVNINPAYRQNEVEYALAQSEIG-VVIAAERFKDSAYAQMLDEARPKCPELR-EVV 150
Query: 135 LGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
L SSS + D LTAD + + +P+ A+ I +TSGTTG PKG ++H
Sbjct: 151 LFSSS-----QWDELTADPTDAELAQVADVAATLSPDDAINIQYTSGTTGFPKGATLTHR 205
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVF-IPKFESKSAL 252
+ ++ Y + D P H G + +A GA V P F+ ++ L
Sbjct: 206 NIGNNGYLVGELLNYTDADRICIPVPFYHCFGMVMGNLAATSHGAAMVIPAPAFDPEATL 265
Query: 253 EAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
AV ++ TSL VP + +A+LA L S++ + G P +M++ +
Sbjct: 266 RAVAEYRCTSLYGVPTMFIAELALLD--GGASHDLSSLRTGIMAGSPCPEHVMRQVIDRM 323
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T + DP + + VG+ PH
Sbjct: 324 NMGQVSICYGMTETSPVSTQTRVDDPL--------------------ELRVTTVGRVGPH 363
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV + G TRG VM YW+Q G+ W+ TGD+ +
Sbjct: 364 LEIKVVDPVTGETLPRGETGEFCTRGYSVMKGYWNQPEKTAEAIDGDGWMHTGDLAVMAP 423
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A VRLR
Sbjct: 424 DGYVAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAWVRLR 483
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIR 545
+ L++E +R+ K + K PR +V K FP+T TGK+R
Sbjct: 484 KP---------------ATDLTAEDVREFATGK-IAHHKIPR-YVHVVKEFPMTVTGKVR 526
Query: 546 RDEVRR---EVMSHLK 558
+ +R E++ HL+
Sbjct: 527 KVAMREEAAEILEHLR 542
>gi|150403500|ref|YP_001330794.1| AMP-binding domain-containing protein [Methanococcus maripaludis
C7]
gi|150034530|gb|ABR66643.1| AMP-dependent synthetase and ligase [Methanococcus maripaludis C7]
Length = 549
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 241/552 (43%), Gaps = 66/552 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
+R +V N T ++F V LA+GLLEIG+ GD V I A N +L ++ A A
Sbjct: 21 EREFMVYPDRNLRLTYKEFDDRVNMLAKGLLEIGITKGDHVGIWAKNVPDWLTFMFATAK 80
Query: 80 IGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLR--WHVSLG 136
IG ++ +N + E + + S + + D D+ Y+++ + +P L+ L
Sbjct: 81 IGAVLVTVNTAYKSHELAYVLKQSDMKALAIIDGFRDTNYIDILYELVPELKTCQRGCLN 140
Query: 137 SSSSDFVNKRDMLTADILKG-YSLRSLPFTHSWAPEGAVI-------------ICFTSGT 182
SS F+ + + +G Y+ L P+ ++ + +TSGT
Sbjct: 141 SSEFPFLKSVIYVGQEKHRGMYNTNELMLLGKHNPDDELLRIKKELNCDDVINMQYTSGT 200
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TG PKGV+++H ++ + E+D T PL H G+ A MA+L G V
Sbjct: 201 TGFPKGVMLTHKNILNNGFYIGDRQKFTEEDRLCITVPLFHCFGIVLAVMAILTHGGTMV 260
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ F+ L AV++ T+L VP + +A S++ + G P
Sbjct: 261 MVELFDPLLVLAAVQKEKCTALYGVPTMF--IAEYSHPMFEMFDLSSLRTGIMAGSTPPI 318
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK+ + S YG+TE S T T D +LE +
Sbjct: 319 EVMKKVVKDMYMTGITSVYGLTEGSPGFT-QTSIDDSLEKRVK----------------- 360
Query: 362 GVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ P E+K+ G +G I +G +VM Y+ V + WL
Sbjct: 361 --TVGRKLPECEVKLVDPETGETLGPGEIGEICCKGYNVMKGYYKMPEKTKEVIDEDGWL 418
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD+ ++D+ G +VGR I GGEN+YP E+E L PGI V+GI + +
Sbjct: 419 HSGDLATVDEEGYYSIVGRIKEMIIRGGENIYPREIEEFLYTMPGINDAQVIGIPDEKYG 478
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LFVLWRK 534
E+V A V +E + E + + +K + +K P+ +FV+ K
Sbjct: 479 EIVGAFVIPKEGYDIREEDVRDFALDK-----------------IARYKVPKHVFVV--K 519
Query: 535 PFPLTSTGKIRR 546
FP+T++GKI++
Sbjct: 520 EFPMTASGKIQK 531
>gi|256397854|ref|YP_003119418.1| long-chain-fatty-acid--CoA ligase [Catenulispora acidiphila DSM
44928]
gi|256364080|gb|ACU77577.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 510
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 232/547 (42%), Gaps = 49/547 (8%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I ++R AA + + G + T + V R ++ G+R GD VAI A NS
Sbjct: 8 IPDLVARAAAEHGDQEAVVDGEQRLTFAELAARVRQAGRAMIAWGVRPGDRVAIWAPNSA 67
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVML-VTDESSDSWY---LELQHT 124
++ L +G ++ PLN R E + + R ++ V E Y L H
Sbjct: 68 EWIATALGAVSVGAVLVPLNTRLKAAEVGYILRTSRTRLVAVAGEFLGVDYVGQLAAIHD 127
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTG 184
+P L + V R A +K + S P+ + FTSGTTG
Sbjct: 128 ELPDLETLTAFTDGGLPPVVSRRQFRAPGMKVPAPVFDEAAASLTPDSPADLFFTSGTTG 187
Query: 185 SPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFI 243
+PKGV +H A IVG D YL P H G + +A LM GA V +
Sbjct: 188 APKGVETTHGQTTRAFHAWSEIVGLRAGDRYLIANPFSHTFGYKAGILACLMRGATMVPL 247
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F++++ +EQ +T PA+ + + K S++ G +P EL
Sbjct: 248 PSFDAEALFTTIEQERITVFPAAPAVYQMMLAHPDLAK--HDLSSLRAAATGAAVIPVEL 305
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
++ ++ + +I+AYG+TE + +T D TP+ V + G
Sbjct: 306 IERMRDTLGLSTVITAYGLTEATGVVTMCRDGD----------------TPDVVARTSGR 349
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
+ VE+++ + G IL RG +VM Y++ A + WL TGD+G +
Sbjct: 350 AI----EGVEVRI----AEATGEILVRGYNVMSGYFEDEAATAEAIDADGWLHTGDVGDL 401
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ GN+ + R GG N YP E+E VLL PG+ V+G+ + RL E+ A V
Sbjct: 402 DEAGNLRITDRIKDMYICGGFNAYPAEIEQVLLTFPGVQEAAVIGVPDQRLGEVGKAFVI 461
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
+ Q + ELL + E+ L +K PR L + FP +S GK
Sbjct: 462 ---------AVPGQRIEPAELLKYA--------EERLANYKVPRHLELV-EAFPRSSLGK 503
Query: 544 IRRDEVR 550
+ + E++
Sbjct: 504 VLKRELQ 510
>gi|229166832|ref|ZP_04294580.1| Feruloyl-CoA synthetase [Bacillus cereus AH621]
gi|423420072|ref|ZP_17397161.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG3X2-1]
gi|423487081|ref|ZP_17463763.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BtB2-4]
gi|423492805|ref|ZP_17469449.1| O-succinylbenzoate-CoA ligase [Bacillus cereus CER057]
gi|423500403|ref|ZP_17477020.1| O-succinylbenzoate-CoA ligase [Bacillus cereus CER074]
gi|423594089|ref|ZP_17570120.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD048]
gi|228616635|gb|EEK73712.1| Feruloyl-CoA synthetase [Bacillus cereus AH621]
gi|401101981|gb|EJQ09968.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG3X2-1]
gi|401155407|gb|EJQ62818.1| O-succinylbenzoate-CoA ligase [Bacillus cereus CER074]
gi|401156289|gb|EJQ63696.1| O-succinylbenzoate-CoA ligase [Bacillus cereus CER057]
gi|401224890|gb|EJR31442.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD048]
gi|402438958|gb|EJV70967.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BtB2-4]
Length = 496
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 247/553 (44%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ ++ ++ G+ +AI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ + L +Q+ + ++
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGATVLFVEETFQNMALSMQN--VTYVQR 125
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+S+ S LK R + + IIC+TSGTTG PKG V+
Sbjct: 126 VISIKS----------------LKEIEDRKIDNFEEINESASFIICYTSGTTGQPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTVHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIVPRKFEPTI 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E++ VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKYKVTVVMGVPTIHQALINCAKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
+ + + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCDYVLIDENKNKVEIGEVGELLIRGPNVMKGYWNRPDATEETIQDG--WLYTGDLAKV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V+G + + E+ +A +
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSEVCEVAVIGTQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L EV+ HCR L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSCSVLTEKEVI-DHCR-LFLAKYKVPKEIVFLEE-LPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLANQLKSR 496
>gi|254460745|ref|ZP_05074161.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2083]
gi|206677334|gb|EDZ41821.1| acyl-CoA synthase [Rhodobacteraceae bacterium HTCC2083]
Length = 587
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 236/547 (43%), Gaps = 84/547 (15%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWSFKEASRAIT 101
LA G L +GL GD + I + N LEW+L A A IG I+ +N + E A+
Sbjct: 85 LAAGFLALGLEKGDRLGIWSPNR---LEWVLTQFATARIGVILVNINPAYRLSELEYALN 141
Query: 102 SIRPVMLVTDES-SDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYS-- 158
+ LV +S S YLE+ P L ++ N R ++ D G S
Sbjct: 142 KVGCKALVLAQSFKSSDYLEMIRALAPELANAERGRLHAARLPNLRHVILMDEAPGDSGV 201
Query: 159 ---------------LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAK 203
LR + P+ A+ I FTSGTTG PKG +SH ++ +
Sbjct: 202 WTFAEVSTLGGPAQQLRLPEIDRTLQPDEAINIQFTSGTTGQPKGATLSHYNIVNNARFV 261
Query: 204 IAIVGYGEDDVYLHTAPLCH--------IGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
+ E+D PL H +GG+S A++ G F++K L+A+
Sbjct: 262 TDRIKLTENDRLAIPVPLYHCFGMVMGVLGGVSKGSALIFPGEA------FDAKQTLDAL 315
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
++L VP + +A L + T + +++ + G P ++MK+ + +
Sbjct: 316 ATERCSALYGVPTMF--VAMLQELYGTPRDLSALRTGVMAGAPCPVDVMKQVNDRMHMKE 373
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ YGMTET+ ++F + D T Q + VG+ PH+E+K
Sbjct: 374 VTICYGMTETAP-VSFQSFVDDTT-------------------QRRCETVGRVHPHLEVK 413
Query: 376 VCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
+ + V G + TRG VM YW+ A+ S + + W+ TGD+ +D+GG
Sbjct: 414 IVDEAGQIVPVGVQGELCTRGYSVMKGYWED-TARTSDAIRDGWMHTGDLAVLDEGGFCS 472
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ GR I GGEN+YP E+E L HP + + V G+ + RL E V A V + S
Sbjct: 473 ITGRVKDMIIRGGENIYPREIEEFLFSHPDVSEVQVFGVPDTRLGEEVCAWVVAKTSGG- 531
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
++ E LR C + + FK PR + + P+T TGK ++ +R
Sbjct: 532 ---------------VTREALRVFC-DGQIAHFKVPRHIRIVDE-LPMTITGKPQKFVMR 574
Query: 551 REVMSHL 557
++ L
Sbjct: 575 DRMIEEL 581
>gi|222094627|ref|YP_002528687.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus Q1]
gi|221238685|gb|ACM11395.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus Q1]
Length = 518
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 240/539 (44%), Gaps = 54/539 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWNEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSKKIDI----EINEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSVICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAK-PSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANVKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV----------- 459
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K E + ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 460 -----VKKDETITEAD-LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 511
>gi|209514969|ref|ZP_03263838.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209504595|gb|EEA04582.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 564
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 153/569 (26%), Positives = 247/569 (43%), Gaps = 80/569 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFI 80
++V + N T ++ + V NLA GL+ +GL GD + I + N +EW L A A
Sbjct: 36 EALVVVHQNVRWTWRELSRRVDNLAVGLMHLGLEPGDRIGIWSQNCAEWVLTQ-FAAAKA 94
Query: 81 GGIVAPLNYRWSFKEASRAITSI--------------RPVMLVTDESSDSWYL---ELQH 123
G I+ +N + +E A+ + V ++ D +S+ + +L+
Sbjct: 95 GLILVNINPAYRHEELEHALNKVGCKALIMSARFRGTDYVEMLRDVASEIAHCVPGQLKS 154
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC------ 177
+P LR + LG +S + + L A LR L A GA + C
Sbjct: 155 ARLPDLRLAIILGGQASAGMLNFEALLAPA-NECDLREL------ATRGATLRCDDPVNI 207
Query: 178 -FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV 236
FTSGTTG+PKG ++H L+ S + D PL H G+ +
Sbjct: 208 QFTSGTTGAPKGATLTHRNLLNNSFFVGEAMKLTSQDRLCIPVPLYHCFGMVLGNLVCAT 267
Query: 237 GACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
+ +P F++K+ LE VE T+L VP + +A L + G +++ +
Sbjct: 268 HGATMVLPGEAFDAKAVLETVEAEKCTALHGVPTMF--IALLSHPEFGRYGLGTLRTGIM 325
Query: 295 GGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTP 354
G P E+MK ++ AYGMTET+ ++F + D P + T
Sbjct: 326 AGSPCPVEVMKRVMERMNMQQVTIAYGMTETAP-ISFQSALDD--------PPEYRVST- 375
Query: 355 NSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVS 409
VG+ PH+E+K+ + V G +LTRG VM YW+
Sbjct: 376 ----------VGRVQPHLEVKIVDEWGRTVLRGAMGELLTRGYSVMCGYWNDPEKTSEAI 425
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
E W+ TGD+ +ID+ G +VGR I GGEN+ P +VE L ++ I + VG+
Sbjct: 426 DQEGWMHTGDLATIDEDGYCRIVGRSKDLIIRGGENICPRDVEEFLYRYSKIQDVQCVGV 485
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E + AC+ LR +E +R CR + + +K PR +
Sbjct: 486 PDPKYGEELCACIILRPGAA----------------ADAEEIRSFCRGR-IAHYKIPR-Y 527
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
V + FP+T TGKI++ +R+++ K
Sbjct: 528 VAFLDRFPMTVTGKIQKFVLRKQMTEAFK 556
>gi|162451287|ref|YP_001613654.1| o-succinylbenzoate-CoA ligase [Sorangium cellulosum So ce56]
gi|161161869|emb|CAN93174.1| o-succinylbenzoate-CoA ligase [Sorangium cellulosum So ce56]
Length = 519
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 218/502 (43%), Gaps = 66/502 (13%)
Query: 49 LLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVML 108
L G+ G VA+ A N+ + I A+ +G ++ P++ R + EA I RP L
Sbjct: 63 LARAGIGQGARVALVAPNALGTVVVIHALLALGAVLVPIHPRLTAGEAGLLIDDARP-DL 121
Query: 109 VTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSW 168
V E + + L+ I +LR G+ +++ + R P S
Sbjct: 122 VLREPALAALLDDAAPEISALRER---GAPAAE----------------AARVPPPDAS- 161
Query: 169 APEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS 228
G + I +TSGTTG PKG V+S A + + A +G +DD +L PLCH+GGLS
Sbjct: 162 ---GDLAIVYTSGTTGRPKGAVLSRRAFLAAAEGSAANLGVRDDDRWLLCLPLCHVGGLS 218
Query: 229 SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 288
L+ + P+FE S L ++ + T L VP ++ LA L + R
Sbjct: 219 IVTRCLLARRAVILAPRFEPASVLASIVRDRATLLSVVPTML--LALLEADRDNVLAR-- 274
Query: 289 VKKILNGGGGLPSELMKE-ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQ 347
++ +L GG G P+ + E A P ++ YG+TE S +T DP PG
Sbjct: 275 LRAVLVGGAGAPARALDECARRGVPA---LTTYGLTEACSQVTAQRPRDPRATEPGS--- 328
Query: 348 AFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPS 407
G P VEL++ GS VGRI RG + Y+ P
Sbjct: 329 ------------------GSPIAGVELRIEGAGSDGVGRIEIRGPVLFRGYYRGPDRAPE 370
Query: 408 VST-GEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+S G W TGD+G++D G + + RR+ I +GGENVYP EVE VL G+ G VV
Sbjct: 371 LSVDGAGWFGTGDLGALDAAGRLHVAARRSDLIVTGGENVYPAEVEQVLASCEGVAGAVV 430
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSK--NKELLLSSEVLRQHCREKNLTGFK 524
G+ + R ++V A + ++ S + + L H R + L
Sbjct: 431 FGVPDDRWGQVVAAAIVPEQASPCEAGGAAPSPAWLGDLAAVVAARLAPHKRPRRLCAVA 490
Query: 525 APRLFVLWRKPFPLTSTGKIRR 546
A PLT+ GK+ R
Sbjct: 491 A----------LPLTAAGKLDR 502
>gi|429216436|ref|YP_007174426.1| acyl-CoA synthetase [Caldisphaera lagunensis DSM 15908]
gi|429132965|gb|AFZ69977.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Caldisphaera
lagunensis DSM 15908]
Length = 558
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 237/511 (46%), Gaps = 44/511 (8%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
A L+E GL D VA+ + NS++++ + G++ P+NY + K+ I +
Sbjct: 76 FANFLIENGLNDYDRVALHSFNSDYFVISMFGTYKAKGVLVPINYLLTGKDVVYQINNSE 135
Query: 105 PVMLVTDESSDSWYLELQH--TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSL 162
+ D D++Y +++ + ++ +V + + NK + +I+ Y+ +
Sbjct: 136 SKFYILD---DAFYDQIKDVLSEFNFVKKYVGINQRNKIKDNKF-IDFKNIINSYTDKEP 191
Query: 163 -PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPL 221
+ W P V I +TSGT PKGV+ ++ +LI + ++ I + D +H PL
Sbjct: 192 DKILNIWDP---VTIMYTSGTESLPKGVIHTNQSLISEYVSSILSGRFESRDAVIHALPL 248
Query: 222 CHIGGLSSAMA-MLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
H + + +GA ++ +PK + + +E++E++ S+ P + + K
Sbjct: 249 YHCAQKDVFLVPYIWIGATNIILPKGDIQLIMESIEKYKANSMFAPPTVWIGIINHPDFK 308
Query: 281 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
K S++KI G +P E++ + FP AK ++ YG TE + + T + D +
Sbjct: 309 KY--DLSSIEKIYYGAAIMPVEILNKLRKEFPNAKFVNYYGQTELAPAHTALLPEDHE-K 365
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWD 400
PG + N+ + G + +P G I+ RG H ML Y
Sbjct: 366 KPGTAGKELLNMI-TELMDDNGNIINEPY-------------KPGEIVGRGPHTMLGYLK 411
Query: 401 QFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPG 460
K + W +GDIG D +++V R+ IK+GGENV EVE V+ +HP
Sbjct: 412 N-EEKTLEAFAYGWFHSGDIGMWDSDHYLYVVDRKKDMIKTGGENVSSREVEEVIYKHPA 470
Query: 461 IIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNL 520
+ + V+G+ + + E V A V L++ ++ S+ L +E++ ++ R NL
Sbjct: 471 VKEVAVIGLPDEKWIEKVTAIVVLKDGYEKSDK------------LKNEII-EYSRN-NL 516
Query: 521 TGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
FKAP+ V++ P + +GKI + E+R
Sbjct: 517 AHFKAPKD-VIFVDSLPKSPSGKILKRELRE 546
>gi|406893362|gb|EKD38446.1| hypothetical protein ACD_75C00732G0010 [uncultured bacterium]
Length = 524
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 146/546 (26%), Positives = 249/546 (45%), Gaps = 41/546 (7%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L+R R++ + G R T ++ + GLL++GLR G+ VAI NS E
Sbjct: 11 LARSLEFHRDNPAIVEGTRCITFRELADRTRRMGNGLLDLGLRKGERVAILGSNSLENGE 70
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRP-VMLVTDESSDSWYLELQHTAIPSLRW 131
LAV G ++ LNYR + E ++ +P V++V DE ++ + S+R
Sbjct: 71 SYLAVPNAGLVLVMLNYRLTPHEIQAVLSDSQPAVLMVHDEFVG--HVGQIVNKLSSVRH 128
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ +G + R L + L S P + A ++ +TSGTTG+PKG ++
Sbjct: 129 LIHIGDKTE---TPRGWLHYETLIENSNPGEPEVEITEDDLAALM-YTSGTTGTPKGCMV 184
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSA 251
+H + +G G D+V + APL H GL M + G + +P++ +
Sbjct: 185 THRNFYHVGRSMAFEMGIGLDNVGIIPAPLFHASGLVVLMNGMYSGTASIIMPRWNVEEF 244
Query: 252 LEAVEQHCVTS-LITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
+ VE+H VT+ ++ P +M + + + + S+++++ G + + K+A
Sbjct: 245 MGLVEKHTVTTGVLATPMLMFFVDHPMHDRYDLR---SLQRLIFAGAPVTPVVFKKAIEK 301
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
F I +G TET S++ + D P+ G+ S Q V +
Sbjct: 302 FGNI-FIHGFGTTETVGSVSILRTADVEQALSEGRPEILGSCG-RSYMDTQAEVVDESGR 359
Query: 371 HVELKVCSDGSSHVGRILTRGAHVMLRYW-DQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
V + +G I RG + L YW + + S G W T D+G +DD G +
Sbjct: 360 QVSPGI-------IGEIRVRGLGMTLGYWHKEEETRHSFRNG--WYYTEDLGRVDDQGFI 410
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
++VGR+ I +GGENV+P EVE VL QHP + V+GI + E V A V + +
Sbjct: 411 YIVGRKKDMIITGGENVFPAEVENVLYQHPAVDQAAVIGIEDPIWGEAVTAFVVKKAGAE 470
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
SE++ LR CR + + G+K P+ V++ PL+++GK+ + +
Sbjct: 471 VSEND----------------LRSFCRNE-IAGYKVPKK-VIFIADLPLSASGKLLKSTL 512
Query: 550 RREVMS 555
++ S
Sbjct: 513 KKRFSS 518
>gi|355571892|ref|ZP_09043100.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
gi|354824988|gb|EHF09223.1| Long-chain-fatty-acid--CoA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 241/544 (44%), Gaps = 67/544 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLN--YR 90
T + ++ V L +GL+ IG+ GD V I A+N +EW + + A A IG I+ +N YR
Sbjct: 47 TYRDLLRKVEELGKGLMAIGVEKGDRVGIWAMNHAEWVVTQV-ATAKIGAIMVNINPAYR 105
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSW---YLE------------LQHTAIPSLRWHVSL 135
E I+ V+L + + +LE L P L+ + +
Sbjct: 106 TYELEYVLRQAEIQTVILQDRFKTSDYVGMFLEACPEVAASRPGHLHTEKFPFLKNVIFM 165
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
G ++ D + D + S + + AV I +TSGTTG PKGVV+SH +
Sbjct: 166 GENAPDGMFSWDEINHMGHDVSDDELFAREESLSFDDAVNIQYTSGTTGFPKGVVLSHHS 225
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI-PKFESKSALE 253
++ + + E D P H G+ S +A + G+ V P F + L+
Sbjct: 226 IVNNGNIIGDGMNFTEKDRLCIPVPFYHCFGMVLSNLACMTHGSTMVLPGPTFNAGEVLQ 285
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
+E+ T+L VP + +A L + ++++ + G P E+MKE
Sbjct: 286 CIEKERCTALHGVPTMF--IAELSHPDFSRYSMETLRTGIMAGSPCPIEVMKEVNRKMHM 343
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++++ YG TET+ +T T DP + + VG+ PH E
Sbjct: 344 SEIVIVYGQTETAPGITMTTTRDPL--------------------ERRVSTVGRVFPHTE 383
Query: 374 LKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + VG I RG VM Y++ A + + W TGD+G++D G
Sbjct: 384 IKIIDPKTGRIVPRGEVGEICARGYCVMKCYYNNPSATHATLDADRWNHTGDLGTMDAEG 443
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V +VGR + GGEN+YP E+E L HP I + V+G+ + + E ++A
Sbjct: 444 YVKIVGRLKDMVIRGGENIYPREIEEFLHNHPKIADVYVIGVPDEKYGEELMA------- 496
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
W E K ++ E +R+ CR K + +K PR +V + FP+ +GKI++
Sbjct: 497 WIMVE---------KGETMTGEEVREFCRGK-IAHYKIPR-YVKFVTEFPMNISGKIQKY 545
Query: 548 EVRR 551
++R
Sbjct: 546 KMRE 549
>gi|384184930|ref|YP_005570826.1| acyl-CoA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410673221|ref|YP_006925592.1| putative acyl-CoA synthetase YngI [Bacillus thuringiensis Bt407]
gi|452197235|ref|YP_007477316.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326938639|gb|AEA14535.1| acyl-CoA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409172350|gb|AFV16655.1| putative acyl-CoA synthetase YngI [Bacillus thuringiensis Bt407]
gi|452102628|gb|AGF99567.1| Long-chain-fatty-acid--CoA ligase [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 518
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 241/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCHEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G + P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAVFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ T S+K + GG + L+K
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVK 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 294 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 346 NEDAPAEPDDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 401
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 402 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 460
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 461 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 503
Query: 544 IRR 546
+++
Sbjct: 504 LQK 506
>gi|159904718|ref|YP_001548380.1| AMP-binding domain-containing protein [Methanococcus maripaludis
C6]
gi|159886211|gb|ABX01148.1| AMP-dependent synthetase and ligase [Methanococcus maripaludis C6]
Length = 549
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 242/552 (43%), Gaps = 66/552 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
+R +V N T ++F V LA+GLLEIG+ GD V I A N +L ++ A A
Sbjct: 21 EREFMVYPDRNLRLTYKEFDDRVNMLAKGLLEIGITKGDHVGIWAKNVPDWLTFMFATAK 80
Query: 80 IGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLR--WHVSLG 136
IG ++ +N + E + + S + + D D+ Y+++ + +P L+ L
Sbjct: 81 IGAVLVTVNTAYKSHELAYVLKQSDMKALAIIDGFRDTNYIDILYELVPELKTSQRGCLN 140
Query: 137 SSSSDFVNKRDMLTADILKG-YSLRSLPFTHSWAPEGAVI-------------ICFTSGT 182
S F+ + + +G Y+ L P+ ++ + +TSGT
Sbjct: 141 SLEFPFLKNVIYVGQEKHRGMYNTNELMLLGKHQPDDELLRIKKELDSDDVINMQYTSGT 200
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHV 241
TG PKGV+++H ++ + E+D T PL H G+ A MA+L G V
Sbjct: 201 TGFPKGVMLTHKNILNNGFYIGDRQKFTEEDRLCITVPLFHCFGIVLAVMAILTHGGTMV 260
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ F+ L AV++ T+L VP + +A S++ + G P
Sbjct: 261 MVELFDPLLVLAAVQKEKCTALYGVPTMF--IAEYSHPMFEMFDLSSLRTGIMAGSTPPI 318
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
E+MK+ + S YG+TE S T T D +LE Q
Sbjct: 319 EVMKKVVKDMYMTGITSVYGLTEGSPGFT-QTSIDDSLEKRVQ----------------- 360
Query: 362 GVCVGKPAPHVELKVCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+ P E+K+ G +G I +G +VM Y+ V + WL
Sbjct: 361 --TVGRKLPECEVKLVDPETGETVGPGEIGEICCKGYNVMKGYYKMPEKTKEVIDEDGWL 418
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD+ ++D+ G +VGR I GGEN+YP E+E L PGI VVGI + +
Sbjct: 419 HSGDLATVDEEGYYSIVGRIKEMIIRGGENIYPREIEEFLYTIPGINDAQVVGIPDEKYG 478
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR-LFVLWRK 534
E+V A V +E + E + +R + +K + +K P+ +F++ K
Sbjct: 479 EIVGAFVIPKEGYDIREED----------------VRDYAIDK-IARYKVPKHVFII--K 519
Query: 535 PFPLTSTGKIRR 546
FP+T++GKI++
Sbjct: 520 EFPMTASGKIQK 531
>gi|254818317|ref|ZP_05223318.1| long-chain-fatty-acid--CoA ligase [Mycobacterium intracellulare
ATCC 13950]
Length = 467
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 234/536 (43%), Gaps = 86/536 (16%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF-- 79
++ + G T + V+ + A E+G+ GD VAI A NS EWI+A AF
Sbjct: 11 DAEAVVDGPLRLTFTEVVERIRCAAGAFAELGIDKGDRVAIWAPNSA---EWIIA-AFGL 66
Query: 80 --IGGIVAPLNYRWSFKEASRAI--TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
GG++ P+N R+ +EA I + ++ V++ +L+ +TA P+ + L
Sbjct: 67 LTAGGVLVPVNTRFKTEEAGDIIVRSKVKAVLV------QKGFLDQDYTA-PAGTPVIDL 119
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SDF++ PF + I FTSGTTG PKG +++H
Sbjct: 120 ---KSDFLSS---------------GSPFERPVSGTDISDIIFTSGTTGRPKGAMLNHGQ 161
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEA 254
+ + E D YL P H GL + + + GA + + F+ + +E
Sbjct: 162 TLRMYEEWATLADLREGDRYLQINPYFHTFGLKAGLVTSFLRGATMLPVAVFDIDTVVEL 221
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+E+ +T L P + L ++ K +++ + G +P EL++ P
Sbjct: 222 IERERITMLPGPPTLYHSLLSVGDKSKL----STLRAAVTGAADIPVELVRRIHGELPFE 277
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L++ YG+TE + TL PG +F +V + G P VE+
Sbjct: 278 TLMTGYGLTEAGNV---------TLSRPGD---SFEDVATTA---------GLPCDGVEV 316
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
++ DG ++ RG VM Y D A E WL TGD+GS D G + +VGR
Sbjct: 317 RIADDGE-----VVVRGYGVMQGYLDDPAATAQAIDAEGWLHTGDLGSFDHAGRLRIVGR 371
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ GG N YP E+E LL HP + V+GI + R+ ++ A V +
Sbjct: 372 KKDMFIVGGFNAYPAEIEGFLLNHPAVAQAAVIGIPDERMGQVGKAFVVRKGE------- 424
Query: 495 CDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+S++ L CR++ + GFK PR V + PL +TGK+ +D++R
Sbjct: 425 -----------VSADELIGWCRDR-MAGFKVPRA-VQFLDSLPLNATGKVMKDQLR 467
>gi|15678684|ref|NP_275799.1| AMP-binding protein [Methanothermobacter thermautotrophicus str.
Delta H]
gi|2621739|gb|AAB85162.1| long-chain-fatty-acid-CoA ligase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 548
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 234/553 (42%), Gaps = 70/553 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T ++F + V LA+GLL IG+ GD V I A N +L ++ A A IG ++ +N +
Sbjct: 35 TYREFNERVNLLAKGLLSIGIGKGDHVGIWATNVPDWLTFLFATAKIGAVLVTVNTAYKS 94
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTAD 152
E + S + + D D Y++ + +P L+ H S F R ++
Sbjct: 95 HELEYVMKQSDMKALAIIDGFRDVDYVQTLYELVPELKTHERGHLRSERFPELRSVIYIG 154
Query: 153 ILKG---YSLRSLPFTHSWAPE-------------GAVIICFTSGTTGSPKGVVISHSAL 196
K Y+ L P+ + + +TSGTTG PKGV+++H +
Sbjct: 155 AQKHRGMYNTNELMLLGKHVPDTELRTVMSTLKNTDVINMQYTSGTTGFPKGVMLTHRNI 214
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAV 255
+ + E+D PL H G+ +A+L G V I F+ L AV
Sbjct: 215 LNNGYYIGERQRFTEEDRLCLPVPLFHCFGIVLGVLALLTHGGTLVMIELFDPLLVLAAV 274
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
E+ T+L VP + +A S++ + G P E MK N +
Sbjct: 275 EKERCTALYGVPTMF--IAEFTHPMFDMFDLSSLRTGIMAGSPCPIEAMKRVMNDMNMKE 332
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ AYG+TE S T ++ DP + + VG P PH+E+K
Sbjct: 333 VTIAYGLTEASPVFTQTSVDDPI--------------------EKRVETVGTPLPHIEVK 372
Query: 376 VCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
+ G G I RG +VM Y+ + WL +GD+ +D+ G
Sbjct: 373 IVDPETGEELGPGEPGEICCRGYNVMKGYYKMPEMTAEAIDEDGWLHSGDLAVMDEDGYY 432
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E L PG+ + VVGI + + E+V A + +RE
Sbjct: 433 SIVGRIKDMIIRGGENIYPREIEEFLHTMPGVKDVQVVGIPDEKYGEIVGAFI-IRED-- 489
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCRE---KNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+++L + R+ + + +K P+ V + FPLT++GK+++
Sbjct: 490 -----------------GADILEEDVRDYAIQRIARYKVPK-HVFFVDEFPLTASGKVQK 531
Query: 547 DEVRREVMSHLKS 559
++R + LK
Sbjct: 532 FKLREMAVELLKK 544
>gi|399009260|ref|ZP_10711701.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
gi|398113155|gb|EJM03005.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM17]
Length = 564
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 159/581 (27%), Positives = 250/581 (43%), Gaps = 76/581 (13%)
Query: 9 ICQCLSR-IAAVKRNSVVTITGNRHN----TGQQFVQDVLNLARGLLEIGLRSGDIVAIS 63
I Q R +A+ R + + RH + QQ + V AR LL +GL++GD + I
Sbjct: 26 IGQAFDRTVASYPRGEALVV---RHQQLRYSWQQLAETVDLHARALLALGLKTGDRLGIW 82
Query: 64 ALNSEWYLEWILAVAFIGGIVAPLN--YRWSFKE-------------ASRAITSIRPVML 108
A N + A A IG I+ +N YR S E A TS ML
Sbjct: 83 APNCAQWCISQFASAKIGAILVNINPAYRSSELEYVLKQSGCQWLVCAGAFKTSDYHAML 142
Query: 109 --VTDESSDSWYLELQHTAIPSLRWHVSLGSSS-SDFVNKRDMLTADILKGYSLRSL-PF 164
+ E + +LQ +P LR +SL + S F+ + AD+ G S+ +L
Sbjct: 143 QGLAPELAQQSIGQLQSERLPDLRGVISLDAQPPSGFLPWSQL--ADLGAGVSVEALRER 200
Query: 165 THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHI 224
S P+ AV I +TSGTTG PKG +SH ++ +G G +D + PL H
Sbjct: 201 QDSLDPDQAVNIQYTSGTTGFPKGATLSHYNILNNGYMVGESLGLGHEDRLVIPVPLYHC 260
Query: 225 GGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
G+ + + P F+ L AV + T L VP + +A L + ++
Sbjct: 261 FGMVMGNLGCVTHGTTMIYPNDAFDPLQTLGAVAEEKATGLYGVPTMF--IAMLDQPRRA 318
Query: 283 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 342
S++ + G P E+M+ + +++ AYGMTETS +L+T
Sbjct: 319 EFDLSSLRTGIMAGATCPIEVMRRVISEMHMSEVQIAYGMTETSPV---------SLQT- 368
Query: 343 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLR 397
P + + VG+ P +E K+ + + +G + TRG VML
Sbjct: 369 ----------GPADDLELRVTTVGRTQPQLESKIIDEAGNIVPRGTIGELCTRGYSVMLG 418
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
YW+ W+ TGD+ ++++ G V + GR I GGEN+YP E+E
Sbjct: 419 YWNNPQGTAEAIDQAGWMHTGDLATMNEQGYVCIAGRNKDMIIRGGENIYPRELEEFFFT 478
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
HP + + V+GI ++ E +VA ++ SE E L+ C+
Sbjct: 479 HPAVADVQVIGIPCSKYGEEIVAWIKFHPGHSASE----------------EELQAWCKA 522
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
+ + FK PR F + FP+T TGKI++ +R + L+
Sbjct: 523 R-IAHFKTPRYFKFVEE-FPMTVTGKIQKFRMREISIEELR 561
>gi|229159944|ref|ZP_04287950.1| Acyl-CoA synthase [Bacillus cereus R309803]
gi|228623536|gb|EEK80356.1| Acyl-CoA synthase [Bacillus cereus R309803]
Length = 518
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 237/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE + + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELTYILQDAASKVVVFEKAVESTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDI----EVDEMDYCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPG++ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVV------------ 459
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 460 -----VKKDETITEVDLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|404216540|ref|YP_006670761.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403647339|gb|AFR50579.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 503
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 147/529 (27%), Positives = 237/529 (44%), Gaps = 51/529 (9%)
Query: 32 HNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRW 91
H T +Q LA L + G+R+GD +A+ +S +E +LA A IG + P+N+R
Sbjct: 7 HLTYRQLDDRTSRLANVLRDRGIRAGDRIAVLGKSSTEIIETVLAAAKIGAVTVPVNWRL 66
Query: 92 SFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA 151
S +E + R ++V +L+ ++ +R + + + + R +
Sbjct: 67 SVRELGEVVADARARLIVCHRD----FLD----SVAEIRSNANTLIEPIVYGDPRQPRSY 118
Query: 152 DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE 211
+ L + S P H + V+ +TSGTTG PKGV+ S++ L + A G+ E
Sbjct: 119 EQLVATASSSDP-GHVGDADDVVLQLYTSGTTGRPKGVLTSNTNLGACTQAG-GPWGFDE 176
Query: 212 DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMA 271
V L PL HIGGL A+ L GA ++ I F +S L+ + VT++ VP ++
Sbjct: 177 SSVSLCAMPLFHIGGLGWALVGLANGAHNIVISDFTPESLLDTLVGERVTNVFLVPTVIG 236
Query: 272 DLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTF 331
L + ++ G +++ I G + L++ +F L YG+TET ++T
Sbjct: 237 MLVDVPGAERADVG--ALRSIAYGSAPITPALLRRTLRTF-GTPLFQVYGLTETHGAVTQ 293
Query: 332 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GR 386
+ D + + P+ H + VG+P P VEL + + G
Sbjct: 294 LDAEDHSTD-------------PDRAHLLR--SVGRPYPWVELSIRTAWGKEAPRGEQGE 338
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
I R Y + + + WL TGDIG ID G V++ R I +GGENV
Sbjct: 339 ICVRTPQATRGYHRRDAETAATIDPDGWLHTGDIGRIDADGYVYVTDRLKDMIITGGENV 398
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
YP EVEAVL HPG+ + VVG+ + E+V A V + + ++
Sbjct: 399 YPTEVEAVLGDHPGVAQVAVVGLPHDTWGEVVTAFVVAAPGHEATAAD------------ 446
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
LR R + L G+K P+ V PL +TGKI + +R + +
Sbjct: 447 ----LRAFARAR-LAGYKVPKA-VHVVDTLPLGATGKILKRALREQFTT 489
>gi|357038645|ref|ZP_09100442.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355359437|gb|EHG07199.1| Long-chain-fatty-acid--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 501
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 226/527 (42%), Gaps = 57/527 (10%)
Query: 31 RHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYR 90
R T QF + + L L+ IG+ GD VAI NS +L AV IG I +P N
Sbjct: 27 REYTWSQFDKIINQLGNALINIGVGKGDRVAIYLPNSPEFLFTYFAVTKIGAIASPFNIL 86
Query: 91 WSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLT 150
+ E S + + R +LV + L P L +++G V+ +++
Sbjct: 87 FKTNEISYILNNSRAKVLVGASAEIEENLMAAIDQFPHLEKIITVGKPVQGAVDLYSLIS 146
Query: 151 ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG 210
+ +L + + A ++ +TSGTTG PKG ++SH L+ + A++
Sbjct: 147 E------ASENLDMQKCSSKDIAALL-YTSGTTGKPKGAMLSHGNLMSIAEVSAAVLHIN 199
Query: 211 EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIM 270
+ D+++ AP CH+ + + + GA + +F + AL+ + ++ T VP +
Sbjct: 200 DQDLFVTAAPYCHVFFVLAVLGPFYAGAGVTTMQRFNPELALDLLSRYKATHFAGVPTMY 259
Query: 271 ADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLT 330
L L K + S + G +P E +++ +F L YG+TETSS++T
Sbjct: 260 --LFMLQEYDKNKRDLSSWRFAHAAGASMPVEYIEQIEQTF-GVSLCETYGITETSSTIT 316
Query: 331 FMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH-----VG 385
+ N + + VG A E+K+ D + VG
Sbjct: 317 Y-----------------------NRLGHGKVGAVGPVARGTEIKIVDDAGNELPVEEVG 353
Query: 386 RILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGEN 445
IL +G V YW+ GE W +GD+G D+ G ++V R+ I GG N
Sbjct: 354 EILVKGPGVFKGYWEMPDMTREAFDGE-WYRSGDLGKYDEDGYFYIVDRKKDMIVCGGYN 412
Query: 446 VYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELL 505
VYP EVE + QHP ++ V+GI ++ E+ A +RL+E + + K +
Sbjct: 413 VYPREVEEAIYQHPKVMETAVLGIKDSVRGEVPKAYIRLKEGAEMVDQEMIDFLKAR--- 469
Query: 506 LSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
L +K PR + + + P + TGKI + +R +
Sbjct: 470 --------------LASYKVPR-NIEFVEELPKSPTGKILKRMLRAD 501
>gi|423415311|ref|ZP_17392431.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG3O-2]
gi|423428898|ref|ZP_17405902.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG4O-1]
gi|401096162|gb|EJQ04211.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG3O-2]
gi|401124162|gb|EJQ31929.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG4O-1]
Length = 518
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 240/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S I +TSGTTG P
Sbjct: 139 AS-SYHEKVNAASSEKVN----IEIDEMDYCS-----------------ILYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ S+K + GG + L+K
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVK 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 294 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 346 NEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 401
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 402 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 460
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 461 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 503
Query: 544 IRR 546
+++
Sbjct: 504 LQK 506
>gi|395536747|ref|XP_003770373.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial
[Sarcophilus harrisii]
Length = 543
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 164/584 (28%), Positives = 264/584 (45%), Gaps = 75/584 (12%)
Query: 5 SQAHICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI 62
S + QCL A + R ++V N T Q Q+V A GLL +GL GD +
Sbjct: 4 SSKTVGQCLEDTAQMFPDREALVVSHQNIRKTYVQIKQEVDTAALGLLSLGLSKGDRLGF 63
Query: 63 SALNS-EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWY- 118
NS EW L LA A G I+ +N + +E + + + ++ T + ++Y
Sbjct: 64 WGPNSYEWVL-MQLATAQAGIILVSVNPAYQSQELKFVLKKVGCKALVFPTTFKTQNYYD 122
Query: 119 --------LE------LQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP- 163
LE L+ +P L + L S + D+L A K L L
Sbjct: 123 ILKQICPELETCSAGALRSKNLPELTTVIVLDSKLPGTFHMNDVLQAG--KTAQLAQLKD 180
Query: 164 FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG-----YGEDDVYLHT 218
S + + I FTSGTTGSPKG +SH ++ ++ +G ++ +
Sbjct: 181 IQRSLSCHDPINIQFTSGTTGSPKGATLSHHNIVNNAI----FIGERMNLRNKEPRLVLP 236
Query: 219 APLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATL 276
+PL H +G + M ++ G + P FE K ALEAV Q T + P + D+
Sbjct: 237 SPLYHCLGSVGGTMVSILYGVTLILSSPSFEGKRALEAVTQERATMIYGTPTMFVDMLN- 295
Query: 277 IRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
+ + D +++ + G P EL++ +++ AYG TE +S +TFM
Sbjct: 296 ---QPDFSSYDISTLRGGVIAGSPAPPELIRTIIQKMNLTEMVVAYGTTE-NSPVTFMNF 351
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHV 394
YD +E + G + P++ Q GK VE+ + G + RG V
Sbjct: 352 YDDNIE---KKINTVGRIMPHTEAQILDPQTGK---QVEINM-------PGELCIRGYCV 398
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
ML YWD P + + D DI ++D+ G +VGR I GGEN+YP E+E
Sbjct: 399 MLGYWDD----PEKTKDAIDEDKWDIAAVDEEGFCKIVGRSKDMIIRGGENIYPAELEDF 454
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
+ P + VVG+ + R+ E + AC+RL+ +++ ++ E L+ H
Sbjct: 455 FHKLPHVQEAQVVGVKDERMGEEICACIRLKANYEGQ--------------ITPEELKAH 500
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
C+ K L+ FK PR ++++ K +PLT +GKI++ ++R + HLK
Sbjct: 501 CKGK-LSHFKIPR-YIVFVKGYPLTISGKIQKYKLREWMEKHLK 542
>gi|398812778|ref|ZP_10571492.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398076492|gb|EJL67552.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 564
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 158/560 (28%), Positives = 239/560 (42%), Gaps = 86/560 (15%)
Query: 29 GNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPL 87
G RH T + ++V +A LL IGL GD + I S N+EW + A A G I+ +
Sbjct: 45 GIRH-TYVELQREVNRMASALLRIGLEPGDRIGIWSHNNAEWLVTQ-FATAKAGLILVNI 102
Query: 88 NYRWSFKEASRAITSIRPVMLVTDES-SDSWYLE----------------LQHTAIPSLR 130
N + E A+ + L+T S + YLE L+ +PSL+
Sbjct: 103 NPAYRLSELEYALNKVECKALITMPSFKTTNYLEMVRSLAPELDGAVLGRLESARLPSLK 162
Query: 131 WHVSLGSSSSD-FVNKRDMLT-------ADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
V +G ++ F+ D+L A + G LR+ + I FTSGT
Sbjct: 163 TVVQIGRDTAPGFLRFSDLLVMGDPADQAVEIVGARLRNT---------DPINIQFTSGT 213
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVF 242
TGSPKG ++H ++ + +D PL H G+ + +
Sbjct: 214 TGSPKGATLTHRNVLNNGFFIGEAMRLSPEDRLCIPVPLYHCFGMVVGNLAALTHGTTIV 273
Query: 243 IPK--FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP 300
P FE S L++V+ T+L VP + +A L + +++ + G P
Sbjct: 274 YPNDAFEPVSVLQSVQDERCTALHGVPTMF--IAELDHPRFKEFDLSTLRTGVMAGSPCP 331
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
E+MK + +++ AYGMTETS + T +TP +
Sbjct: 332 IEVMKRVVSEMHMSEVTIAYGMTETSPASC-----QSTTDTP---------------LEK 371
Query: 361 QGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVW 414
+ +GK PH+ELKV S VG + TRG VM YW + W
Sbjct: 372 RVSTIGKVLPHLELKVIDPISGEILPAGKVGELCTRGYSVMRGYWADAAKTAEAIDADAW 431
Query: 415 LDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARL 474
+ +GD+ ID+ G V + GR + GGENVYP E+E L +HP I + V+G+ + +
Sbjct: 432 MHSGDLAVIDEDGYVNIAGRIKDMVIRGGENVYPREIEEFLYRHPAIQDVQVIGVPDQKY 491
Query: 475 TEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRK 534
E + A V LR SE E LR C + + FK PR ++ +
Sbjct: 492 GEELCAWVVLRNGASLSE----------------EDLRAFC-QGQIAHFKVPR-YIRFVN 533
Query: 535 PFPLTSTGKIRRDEVRREVM 554
FP+T TGKI++ V RE+M
Sbjct: 534 GFPMTVTGKIQK-FVMREMM 552
>gi|358455929|ref|ZP_09166154.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
gi|357080580|gb|EHI90014.1| o-succinylbenzoate--CoA ligase [Frankia sp. CN3]
Length = 501
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 148/529 (27%), Positives = 222/529 (41%), Gaps = 80/529 (15%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF----IGG 82
+ G+ T + V+ V A +G+ GD VAI A NS EW +A AF GG
Sbjct: 48 VDGDLRLTYVELVERVRRAAGAFAALGVGKGDRVAIWAPNSA---EWAIA-AFGLLTAGG 103
Query: 83 IVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDF 142
++ P+N R+ EA+ I ++T + + V G ++ D
Sbjct: 104 VLVPVNTRYKAAEAADIIVRSGAKAVLT------------QPGFLGIDYEVPDGVTNLD- 150
Query: 143 VNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLA 202
L +D L S PF I FTSGTTG PKGV ++H +
Sbjct: 151 ------LKSDFLASGS----PFEREVDGGDIADIIFTSGTTGRPKGVTMNHRQTLRLYSE 200
Query: 203 KIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVT 261
E D YL P H G + + A L+ GA + + F+ E VE+ +T
Sbjct: 201 WCYQADLREGDRYLIVNPFFHTFGYKAGLVASLIRGATILPLAVFDVDKVGELVEREKIT 260
Query: 262 SLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYG 321
L P I L S++ + G +P EL++ P +++ YG
Sbjct: 261 MLPGAPTIYHSLLE----AGGKHDLSSLRCAVTGSADIPVELIRRMKAELPFQHIMTGYG 316
Query: 322 MTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGS 381
+TE ++ T PG +F ++ VG P +E+ V DG
Sbjct: 317 LTEAGTA---------TASRPGD---SFESIA---------TTVGAPCDGIEVAVAGDGE 355
Query: 382 SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKS 441
+L RG VM Y+D LA + WL TGD+GS+D+ G + +VGR+
Sbjct: 356 -----VLIRGYSVMQGYFDDPLATAETVDADGWLHTGDLGSLDERGYLKIVGRKKDMFIV 410
Query: 442 GGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKN 501
GG N YP E+E LL+HP + V+G+ +ARL E+ A + R + + SK
Sbjct: 411 GGFNAYPAEIEGYLLEHPAVAQAAVIGVPDARLGEVCKAFIVRRAGAEVTAEEVMSWSKE 470
Query: 502 KELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ + GFKAPR FV + PL +TGK+ +D++R
Sbjct: 471 R-----------------MAGFKAPR-FVEFLDALPLNATGKVMKDQLR 501
>gi|441507738|ref|ZP_20989663.1| putative acyl-CoA synthetase [Gordonia aichiensis NBRC 108223]
gi|441447665|dbj|GAC47624.1| putative acyl-CoA synthetase [Gordonia aichiensis NBRC 108223]
Length = 522
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 242/546 (44%), Gaps = 58/546 (10%)
Query: 14 SRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEW 73
+R AA+ + G+ + QF + + LA L+ G+ SGD VA N +L
Sbjct: 18 ARRAAIGPDHPAVTYGDETLSYAQFQRRIDCLADRLVAGGVESGDRVAYLGPNHSAFLIS 77
Query: 74 ILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV 133
+ A A G PLN+R + E + + L+ D + S E++ S+ +V
Sbjct: 78 LFACARAGATFVPLNFRLTGPELAYILDDCGAATLIADATLTSVVDEVRSDL--SVARYV 135
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
++G +S + + ++L A + + APE +I +TSGTTG PKG +++H
Sbjct: 136 AVGEASG-WESFDELLAAGTPIAEPVLA-------APEDVAVIMYTSGTTGRPKGAMLTH 187
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP-KFESKSAL 252
L ++ + DV APL HIGGL+ + + HV + F+ AL
Sbjct: 188 GNLFWNNINALLSFDTVSSDVTYTAAPLFHIGGLNVTTLVTLQKGGHVILSGAFDPTQAL 247
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+E++ VT++ VPA+ ++ + S++ + GG +P LM+ +
Sbjct: 248 SDIEKYRVTTMFGVPAMFLFMSQVPAFATA--DLSSLRYFICGGAPVPEPLMRAYADR-- 303
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
YG+TET+ M + + + G K P
Sbjct: 304 GVTFAQGYGLTETAPLALVMGI--------------------DESEKKIGAAGNKVLPLS 343
Query: 373 ELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
++++ ++ V G I RG VM+ YW+ A + + W TGD+G DD G
Sbjct: 344 DVRLVDATNTEVAAGQPGEICVRGPQVMVGYWNNPGATDAAIDDDGWFHTGDVGREDDDG 403
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
V++V R + SGGENVYP EVE+VL HP + + +VG+ +A+ E V A +
Sbjct: 404 YVYVVDRVKDMVISGGENVYPAEVESVLYSHPAVAEVAIVGLPDAKWGEAVTAVI----- 458
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
++ + + L E LR+ ++ L +K P L + + P +GK+ +
Sbjct: 459 ---------ATAPGETVTL--EELREFAADR-LARYKLP-LRLEFVDALPRNPSGKVLKF 505
Query: 548 EVRREV 553
++R E+
Sbjct: 506 QLRDEL 511
>gi|423601680|ref|ZP_17577680.1| hypothetical protein III_04482 [Bacillus cereus VD078]
gi|401229078|gb|EJR35595.1| hypothetical protein III_04482 [Bacillus cereus VD078]
Length = 518
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 245/546 (44%), Gaps = 53/546 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAMIERDFPNSSFWYVEDDAPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + F + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDFCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTM---WNMLLQKDLTKYDLTSMKIGVYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ Q V + P
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIQIVKPNEDGPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DTLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPG++ + V+G + E VVA V +++ +E++
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVV-VKKDENITEAD 470
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
L +C+E + L +K PR + L+ P ++GK+++ V RE
Sbjct: 471 ----------------LETYCKESDELADYKRPRHY-LFADELPRNASGKLQK-FVLRES 512
Query: 554 MSHLKS 559
+ +K
Sbjct: 513 LKGMKK 518
>gi|146339585|ref|YP_001204633.1| long-chain-fatty-acid--CoA ligase [Bradyrhizobium sp. ORS 278]
gi|146192391|emb|CAL76396.1| Putative long-chain fatty-acid-CoA ligase [Bradyrhizobium sp. ORS
278]
Length = 526
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 142/528 (26%), Positives = 229/528 (43%), Gaps = 65/528 (12%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
+F + +A L +GL+ G+ +A NS+ Y E ++ ++AP+N+R + E
Sbjct: 38 EFDRKTNQVANALKALGLKPGERIAYFGKNSDIYFELLVGAMKANVVMAPVNWRLAGPEV 97
Query: 97 SRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS---SDFVNKRDMLTAD 152
+ + + PV+ V E + +PS+R ++ + D+ RD AD
Sbjct: 98 AFIVEDCKAPVLFVGPEFIT--MIRQIRDQLPSVRQIITTEGGAPEWQDYTAWRDAQRAD 155
Query: 153 ILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALI-----VQSLAKIAIV 207
G ++ P+ + +TSGTTG PKG ++SH+ + K
Sbjct: 156 D-PGVAI---------TPKDIALQLYTSGTTGKPKGAMLSHANFLNLVNTSNPEEKPDWN 205
Query: 208 GYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVP 267
+ DDV L P+ HIGG + L GA V +F+ L+ EQ +T L VP
Sbjct: 206 KWSTDDVSLIAMPIFHIGGSGWGLMSLYHGARGVIAREFDPTKILDFFEQSGITKLFMVP 265
Query: 268 AIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSS 327
A M + R ++ R +K +L G +P+ L+KE + F K + YGMTET+
Sbjct: 266 AAMQFVVRQPRARQVDFSR--LKYMLYGASPIPAALLKECIDVF-KCGFVQMYGMTETTG 322
Query: 328 SLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSS 382
++ + D +E ++ A GKP P VE+ +
Sbjct: 323 TIVALPPED-HVEGLERMRSA-----------------GKPLPGVEVAIIDPLGNPLPPR 364
Query: 383 HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSG 442
VG I TR M YW+ A + WL TGD G +D+ G V++ R I SG
Sbjct: 365 EVGEIATRSGSNMAGYWNLPEATARTLGKDGWLRTGDAGYMDEDGYVYIHDRIKDMIISG 424
Query: 443 GENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNK 502
GEN+YP EVE+ + HP + V+GI + + E V A V ++ Q + ++ ++ +
Sbjct: 425 GENIYPAEVESAICDHPDVAEAAVIGIPDDKWGEAVKAIVVMKPGKQATATDIINFTRTR 484
Query: 503 ELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ GFK P+ V + P +GKI R +R
Sbjct: 485 -----------------IAGFKTPKT-VDFLDALPRNPSGKILRRNLR 514
>gi|298245487|ref|ZP_06969293.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297552968|gb|EFH86833.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 582
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 251/557 (45%), Gaps = 81/557 (14%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLN--YR 90
T ++ + V ARGL+ +G+ GD V I +LN +EW + A A IG I+ +N YR
Sbjct: 63 TYRELHEQVERCARGLMSLGIEKGDRVGIWSLNRAEWCVTQ-FATAKIGAILVNINPAYR 121
Query: 91 -----WSFKEASRAITSIRP----------VMLVTDESSDSWYLELQHTAIPSLRWHVSL 135
++ K++ + I P VM +T E LQ +P+L + +
Sbjct: 122 LHELEYALKQSGCSALVISPAFKSSNYPEMVMALTPELVTCEPGALQSARLPALHTVICM 181
Query: 136 GSSSSD-------FVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
G +++ + + + + D L R+L F + + + +TSGTTG PKG
Sbjct: 182 GEDATEGMFSWEALLKRAEQVGIDQLYARQ-RTLEF------DDPINVQYTSGTTGFPKG 234
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-F 246
+SH ++ + + +D PL H G+ + + GA V+ + F
Sbjct: 235 ATLSHHNILNNGYFVARLQNFTHEDKLCIPVPLYHCFGMVMGNLGCVTHGATMVYPSESF 294
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + L+AV++ T+L VP + +A L S++ + G P E+M+
Sbjct: 295 DPLAVLQAVQEEQCTALYGVPTMF--IAELEHPDFHTFDLVSLRTGVMAGSPCPIEVMRN 352
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
N +++ YGMTET+ ++ + D E + VG
Sbjct: 353 VINRMHMSQVEICYGMTETAP-VSVQSRLDSPFEK-------------------RVATVG 392
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PH+E+K+ + S + G + TRG VML YWD A + W+ TGD+
Sbjct: 393 QIHPHLEIKIVNPESGQIVPQGIPGELCTRGYSVMLGYWDNPEATQAAIDQARWMHTGDL 452
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
++D+ G + +VGR I GGEN+YP E+E L HP + + V+G+ + R E + A
Sbjct: 453 ATMDEEGYINIVGRIKDMIIRGGENIYPREIEEFLYTHPQVSDVQVIGVPDERYGEEIAA 512
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
++L+ +S E LR C K + +K PR ++ + +P+T
Sbjct: 513 WIKLKPGAS----------------VSQEDLRAFCLGK-IAHYKIPR-YIKFVDAYPMTI 554
Query: 541 TGKIRRDEVRREVMSHL 557
+GKI++ +R++ ++ L
Sbjct: 555 SGKIQKYLMRQQAIAEL 571
>gi|229177408|ref|ZP_04304790.1| Acyl-CoA synthase [Bacillus cereus 172560W]
gi|228606040|gb|EEK63479.1| Acyl-CoA synthase [Bacillus cereus 172560W]
Length = 516
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 240/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 136
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S I +TSGTTG P
Sbjct: 137 AS-SYHEKVNAASSEKVN----IEIDEMDYCS-----------------ILYTSGTTGHP 174
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 175 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 234
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ S+K + GG + L+K
Sbjct: 235 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVK 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 292 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 343
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 344 NEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 399
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 400 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 458
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 459 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 501
Query: 544 IRR 546
+++
Sbjct: 502 LQK 504
>gi|78064767|ref|YP_367536.1| AMP-binding protein [Burkholderia sp. 383]
gi|77965512|gb|ABB06892.1| AMP-dependent synthetase and ligase [Burkholderia sp. 383]
Length = 575
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 154/559 (27%), Positives = 242/559 (43%), Gaps = 84/559 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F +V LA GL +G+ GD V I + N SEW L A A IG ++ +N +
Sbjct: 60 TWREFANEVDVLASGLASLGIVKGDRVGIWSPNRSEWLLTQ-FATARIGAVLVNINPAYR 118
Query: 93 FKEASRAITSIR-PVMLVTDESSDSWYLELQHTA----------------IPSLRWHVSL 135
E A+ + ++ + S Y+E+ T +PSLR VS+
Sbjct: 119 LSELEYALNKVGCKAVIAAERFKTSAYVEMLQTIAPELATATPGDLHAVRVPSLRTVVSM 178
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLP-----FTHSWAPEGAVIICFTSGTTGSPKGVV 190
G D AD++ P + A + I FTSGTTGSPKG
Sbjct: 179 G----DVAPAGMFRFADVMARGRQAVDPALLDAIGATLAATEPINIQFTSGTTGSPKGAT 234
Query: 191 ISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FES 248
++H ++ + + + E D PL H G+ A +A + GA VF + F+
Sbjct: 235 LTHRNVVNNGRSIATAMRFTEQDTLCIPVPLYHCFGMVLAVLACVSKGAAMVFPGEAFDP 294
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
+ L AV T+L VP + +A L + +++ + G P E MK
Sbjct: 295 VATLAAVADERCTALHGVPTMF--IAELDHPEFAKFDLSTLRTGIMAGSPCPIETMKRVV 352
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+ +++ AYGMTETS P +F + T + + + + VG+
Sbjct: 353 SQMHLSEITIAYGMTETS-------------------PVSFQSSTDDPLEK-RTTTVGRI 392
Query: 369 APHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV----WLDTGD 419
PH+E+KV V G + T+G VML YWD T EV W+ TGD
Sbjct: 393 QPHLEVKVVDPSGGIVPVGATGELCTKGYSVMLGYWDD-----DTKTREVLVDGWMHTGD 447
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ ++D G +VGR + GGENVYP E+E L +HP I V G+ + + E +
Sbjct: 448 LATLDADGYCNIVGRLKDMVIRGGENVYPREIEEFLFRHPKIQSAQVFGVPDTKYGEELC 507
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A + LR Q +E + +R C + + +K PR ++ + P+T
Sbjct: 508 AWIVLRADEQMTEDD----------------VRAFCNGQ-IAHYKIPR-YIRFVDELPMT 549
Query: 540 STGKIRRDEVRREVMSHLK 558
TGK+++ +R ++ LK
Sbjct: 550 VTGKVQKFVMRDRMIEELK 568
>gi|283780132|ref|YP_003370887.1| AMP-dependent synthetase and ligase [Pirellula staleyi DSM 6068]
gi|283438585|gb|ADB17027.1| AMP-dependent synthetase and ligase [Pirellula staleyi DSM 6068]
Length = 576
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 152/562 (27%), Positives = 246/562 (43%), Gaps = 92/562 (16%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T + DV + RGL+ G+R+GD VAI A N ++ LA A IG ++ +N +
Sbjct: 61 TWHELAADVRAVTRGLIACGIRTGDHVAIWATNIPQWVLLQLATAEIGAVLVTINPAYRP 120
Query: 94 KEASRAI-TSIRPVMLVTDESSDSWYLEL----------------QHTAIPSLRWHVSL- 135
E + S + ++D S Y ++ Q P LR V L
Sbjct: 121 FELEYVLGQSDAAALFLSDAFKTSNYYQMFAEVCPELGKNSDGVIQSIRFPKLRLAVGLR 180
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
G+ S + ++++ A K S L P PE AV I +TSGTTG PK ++SH
Sbjct: 181 GAVPSGMLRWQELVDAG--KNISDAELAPHLARPQPEDAVNIQYTSGTTGFPKAAMLSHR 238
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTA-------PLCH-IGGLSSAMAMLMVGACHVFIPK- 245
L++ +L Y D +L A P H G + ++A ++ GA + +
Sbjct: 239 NLLMNAL-------YIGDRQHLTAADRICIPVPFYHCFGCVLGSLAAVVHGAAMILPAEH 291
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F++ AL A+EQ T+L VP + + T RD S++ + G P E+
Sbjct: 292 FQATKALVAIEQERATALYGVPTMFIAMLE----DPTLAARDISSLRTGIMAGSPCPIEV 347
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP---TLETPGQLPQAFGNVTPNSVHQP 360
M+ T + +L AYG TE S +T ++ DP +ET
Sbjct: 348 MRRVTTTLHCPELTIAYGQTEASPVITQTSIDDPLELRVET------------------- 388
Query: 361 QGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
VG+P P E+++ + V G ++ RG VM+ Y+ A + E WL
Sbjct: 389 ----VGRPLPGFEVRIVGPDNLDVPEGEQGELVARGHGVMIGYYANPQATAAAIDREGWL 444
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
+GD+ G+ + GR + GGEN+YP E+E L HP I + VVG+ ++
Sbjct: 445 HSGDLARRLPTGHYKITGRLKEMVIRGGENIYPREIEEFLFTHPAIEQVAVVGVPDSHFG 504
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E + A ++ + Q +E + +R +CR ++ +K PR ++
Sbjct: 505 EELCAWIKRKADAQLTEDD----------------VRAYCR-GSIAHYKTPR-YICLVDS 546
Query: 536 FPLTSTGKIRRDEVRREVMSHL 557
FP T TGKI++ ++R ++ L
Sbjct: 547 FPQTVTGKIQKFKIRETMIDQL 568
>gi|217969185|ref|YP_002354419.1| AMP-binding domain-containing protein [Thauera sp. MZ1T]
gi|217506512|gb|ACK53523.1| AMP-dependent synthetase and ligase [Thauera sp. MZ1T]
Length = 576
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 248/568 (43%), Gaps = 78/568 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAF 79
R ++V + T Q V LA GL+ +GL G+ + I S N EW L A A
Sbjct: 48 REALVVRHQDVRLTYAQLKSKVDALACGLMRLGLEPGERIGIWSQNNMEWALTQ-FASAK 106
Query: 80 IGGIVAPLN--YRWSFKEASRAITSIRPVMLVTDESSDSWYLE----------------L 121
G ++ +N YR S E + R ++L + S YLE L
Sbjct: 107 AGLVLVNINPAYRRSELEYALEKVGCRALIL-SPAFKTSNYLEMIADLAPELGHCEPGLL 165
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP----FTHSWAPEGAVIIC 177
+ +PSL + +G+ S + D D+L+ S L + + + I
Sbjct: 166 RSHRLPSLEMVIRMGAEKSPGMMSFD----DLLRAPSREELTALAVLSEKLQFDDPINIQ 221
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMV 236
FTSGTTG PKG +SH ++ + D PL H G+ + L
Sbjct: 222 FTSGTTGHPKGATLSHHNILNNGFFVGEAIKLMPGDRLCIPVPLYHCFGMVMGNLGCLTH 281
Query: 237 GACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
GA V+ + FE + LE V Q T L VP + +A L + S++ +
Sbjct: 282 GATMVYPGEAFEPLAVLETVAQEKCTGLYGVPTMF--IAALDHPRFAEFDLSSLRTGIMA 339
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P E+MK +++ AYGMTETS P +F + T +
Sbjct: 340 GSPCPIEVMKRVIGKMNMSEVTIAYGMTETS-------------------PVSFQSGTDD 380
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWD-QFLAKPSVS 409
+ + + VG+ PH+E+K+ + V G + TRG VML YWD + K ++
Sbjct: 381 PIDR-RVSTVGRIQPHLEVKIVDNEGRIVPRGQSGELCTRGYSVMLGYWDDEARTKEAID 439
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
G W+ TGD+ IDD G +VGR + GGEN+YP E+E L HP ++ + VVGI
Sbjct: 440 AGG-WMHTGDLAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYAHPKVLDVQVVGI 498
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E + A + RE + +E +R++C+ + + +K PR +
Sbjct: 499 PDQKFGEELCAWIIPREGERLTEDE----------------VREYCKGQ-IAHYKIPR-Y 540
Query: 530 VLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ + FP+T TGKI++ +R+ + L
Sbjct: 541 IRFVDSFPMTVTGKIQKFLIRQRMKEEL 568
>gi|119718315|ref|YP_925280.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
gi|119538976|gb|ABL83593.1| AMP-dependent synthetase and ligase [Nocardioides sp. JS614]
Length = 508
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 235/552 (42%), Gaps = 63/552 (11%)
Query: 5 SQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISA 64
+Q +I + A I G R T Q LA L+ G+R G+ VA+
Sbjct: 8 AQLNIANGVREFARGTPRQPAVIDGERMLTYAQLGDRAARLANALVARGVRPGEHVAVCV 67
Query: 65 LNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHT 124
N + E +A G ++ PLN R++ EA I ++T+ S +
Sbjct: 68 GNRLEHPEIACGIAMAGLVIVPLNPRYTEPEARYIIEHSGARAVITEAHLASV---VTPA 124
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKG--YSL-RSLPFTHSWAPEGAVIICFTSG 181
A + V LG+S DF + ++L A + Y + + PF I +TSG
Sbjct: 125 AADQGAFVVVLGTSP-DFESYDEVLAASSPEDPEYPVDETEPFC----------IAYTSG 173
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
TTG PKGV+ISH + + G G L AP+ H G + A + G V
Sbjct: 174 TTGRPKGVMISHRSRALTFYQAATEWGLGTGRTSLAVAPMYHGAGFAFGYAPVFTGGTVV 233
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+PK+ + LE E+H V S+ VPA L L + S+ + LP
Sbjct: 234 MLPKWSPEQMLELAERHRVQSIFLVPAHAQMLRRLGGEAIATRDLSSLDTLYFNAAALPF 293
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
EL K SFP A + YG TE S +T + D L PG
Sbjct: 294 ELKKWVIESFPGAGVHELYGSTE-SGIITNLRPVD-MLRKPGS----------------- 334
Query: 362 GVCVGKPAPHVELKVCS-DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+P E++V DG+ +G + +R ++ML Y++ A ++ + ++
Sbjct: 335 ---VGQPWFMTEIRVVDLDGAPVGPGGMGELYSRSPYLMLGYYNDPDATARCTSEDGFVT 391
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
GD+ +DD G V +VGR + I SGG N+YP EVE VL +HP + + VVG
Sbjct: 392 CGDLVRLDDEGYVHIVGRSSDMIVSGGINIYPREVEDVLARHPSVTDVAVVG-------- 443
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
R S +W E + L E L HCRE +L G+K PR + + +
Sbjct: 444 --------RSSEEWGEEVTAYVVLASGVTLDVESLEAHCRE-SLAGYKIPRRWHVIGE-L 493
Query: 537 PLTSTGK-IRRD 547
P + GK ++RD
Sbjct: 494 PRNAAGKVVKRD 505
>gi|313233611|emb|CBY09782.1| unnamed protein product [Oikopleura dioica]
Length = 566
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 238/554 (42%), Gaps = 94/554 (16%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
+A G L GL+ G+ + I + N E ++E A A G ++ +N + E + +
Sbjct: 64 IAAGFLAAGLKPGECIGIWSPNHEEWIETQFAAAKAGLVLVNVNPSYKSAELAYVLKMCG 123
Query: 105 PVMLVTDESSDSWYLE--LQHTAI--PSLRWHVSLGS----------------------- 137
LV+D + E L T I P L + S
Sbjct: 124 IRALVSDTFYNRQPYEEILAKTLIDNPQLSTQLKFVSYIGQNFDELAGVRTFSFDNFRSD 183
Query: 138 SSSDFVNKRDMLTADIL--KGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
S +N+ + + A +L +G R+L I FTSGTTGSPKG +SH
Sbjct: 184 QDSSHINEVENIIASLLIERGSCNRAL-------------IKFTSGTTGSPKGATLSHHN 230
Query: 196 LI---VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKS 250
++ +QS + ++ EDDV L P H G A ++ C + IP F ++
Sbjct: 231 ILNNAMQSSSSERLLT-TEDDVILVNTPFYHCFGCVMANLFMLTRGCKLVIPAPTFNAEV 289
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+A + T P + DL R ++ ++ ++ G P +L+++
Sbjct: 290 GLDAAQAEGATVWYGTPTMFVDLLASPRRSSFVAPQEGIRGLM-AGSICPEQLLRDLDQH 348
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ K+ AYG TE +S +TFMT T S + + VG P
Sbjct: 349 Y-NCKVFVAYGTTE-NSPITFMT-------------------TNESTFKQRTTTVGCVMP 387
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H E K+ G I RG V Y+++ V + W TGD+ ++D
Sbjct: 388 HTEAKLVDTEHGKTVEMGEKGEICIRGPCVFKGYFNEPEKTAEVVDEDGWYHTGDLATMD 447
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G V +VGR I GGEN+YP EVE+ LL+HP ++ VVG+ + RL E V A VRL
Sbjct: 448 ESGYVKIVGRAKDMIIRGGENIYPAEVESFLLKHPAVVDAQVVGVPSKRLGEEVAAYVRL 507
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ L+++ L+Q+ E N+T +K P+ ++ + +PLT TGKI
Sbjct: 508 ASGAE----------------LTADELKQYGFE-NMTHWKVPK-YIKVVEEYPLTVTGKI 549
Query: 545 RRDEVRREVMSHLK 558
R+ E+R + K
Sbjct: 550 RKVELRENAKNDFK 563
>gi|452976175|gb|EME75991.1| long-chain-fatty-acid--CoA ligase [Bacillus sonorensis L12]
Length = 513
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 237/544 (43%), Gaps = 50/544 (9%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L A K + I G + T + Q + A GL E+G+ GD VA+ N+ ++
Sbjct: 7 LGETAKSKPDRTAYIFGEKKETYGELQQKIDCFAGGLYELGVEKGDHVALLLGNTPHFVI 66
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
G +V P+N ++ E +T+ ++V D Y E H +P + H
Sbjct: 67 SFFGALKAGAVVIPINPSYTPTEIGYMLTNGDAKVIVADGRLLPLY-EKMHELLPKVE-H 124
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYS--LRSLP-FTHSWAPEGAVIICFTSGTTGSPKGV 189
V + ++ LK ++ ++++ + E I +TSGTTG PKG
Sbjct: 125 VVFCETEGQLHEPENLQIKAKLKSFTNLMKAVSRVSPELNEEDTAAILYTSGTTGKPKGA 184
Query: 190 VISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFES 248
+++H L + + E D+ + P+ H+ L+ M A LM GA + IPKF
Sbjct: 185 MLTHKNLFSNANDTAGYLTMNEADLVVAALPMFHVFCLTVCMNAPLMNGAAILIIPKFSP 244
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
+ + V++H T VP + L G SV+ ++GG +P L+K
Sbjct: 245 SAVFKLVKKHKATIFAGVPTMYNYLYQ--HEAADENGFASVRLCISGGAAMPVALLKNFE 302
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDP--TLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
F ++ YG++E S +T ++P T PG + NV V++ +G
Sbjct: 303 EKF-NVLVLEGYGLSEASP----VTCFNPFSTGRKPGSIGTNILNVKNKVVNE-----LG 352
Query: 367 KPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
+ P + VG ++ +G +VM Y+ + + + + + WL TGD+ D+
Sbjct: 353 EELP----------AGQVGELIVKGPNVMKGYY-KMPEETAHTIKDGWLYTGDLAKRDED 401
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G ++V R+ I GG NVYP EVE VL +HP + VV+G+ + E V
Sbjct: 402 GYFYIVDRKKDMIIVGGYNVYPREVEEVLYRHPEVAEAVVIGVPDPNTGEAV-------- 453
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
C K K L+ E + HCR+ +L +K P +++ P STGKI R
Sbjct: 454 -------QCYIVPKTK--TLTEEEIAMHCRQ-HLAKYKRPSS-IIFLDEIPKNSTGKILR 502
Query: 547 DEVR 550
++
Sbjct: 503 RALK 506
>gi|315441803|ref|YP_004074682.1| acyl-CoA synthetase [Mycobacterium gilvum Spyr1]
gi|315260106|gb|ADT96847.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
gilvum Spyr1]
Length = 560
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 250/551 (45%), Gaps = 62/551 (11%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
LSR A ++ ++V R T + + V LA L E G+ GD V I LN ++E
Sbjct: 32 LSRHALMQPDTVALRFLGRSTTWGELDRRVTALAGALHERGVGFGDRVLILMLNRTEFME 91
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI----PS 128
+LAV +GGI P+N+R + E + ++ +++T+ LE TA+ P
Sbjct: 92 SVLAVNKLGGIAVPVNFRMTPSEIAFLVSDCAAEVVITES-----VLENVATAVRDIDPK 146
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKG 188
L + G +S D V D + A L +P + +I +TSGTTG PKG
Sbjct: 147 LATVIVAGGTSRDDVLDYDDVLASTTAAPPLVDIP------DDSPALIMYTSGTTGRPKG 200
Query: 189 VVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--K 245
V++H+ L Q++ + G D+ P HI G+ S ++ +M+G V P
Sbjct: 201 AVLTHNNLAGQAMTLLFTNGADINHDIGFIGVPFFHIAGVGSIVSGMMLGRPTVIYPLGA 260
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LM 304
F+ L+ +E VT + VPA + + R+ + L+ G S+ L+
Sbjct: 261 FDPNELLDVLEAEKVTGIFLVPAQWQAVCAAQKANP----RNLKLRFLSWGAAPASDTLL 316
Query: 305 KEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC 364
++ + +FP A++++A+G TE S +T M L D L G
Sbjct: 317 RQMSETFPGAQILAAFGQTEMSP-VTCMLLGDDALRKLG--------------------S 355
Query: 365 VGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGD 419
VGK P V ++ + + VG I+ R +M YW+ A G W +GD
Sbjct: 356 VGKVIPTVSARIVDEDMNDVPIGQVGEIVYRAPTLMTGYWNNPTATAEAFAGG-WFHSGD 414
Query: 420 IGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVV 479
+ D+ G +W+V R+ I SGGEN+Y EVE VL HP I+ + V+G ++ + E+ V
Sbjct: 415 LVRQDEEGYIWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRSHRKWGEVPV 474
Query: 480 ACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLT 539
A LR S S+ + L L+ L Q ++ L +K P+ + + P
Sbjct: 475 AVAVLRSSL--------NSTGSGRLELTD--LEQFLGDR-LARYKHPKAIEIV-EALPRN 522
Query: 540 STGKIRRDEVR 550
GK+ + E+R
Sbjct: 523 PAGKVLKTELR 533
>gi|86750710|ref|YP_487206.1| long-chain-fatty-acid--CoA ligase [Rhodopseudomonas palustris HaA2]
gi|86573738|gb|ABD08295.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
HaA2]
Length = 525
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 148/559 (26%), Positives = 240/559 (42%), Gaps = 68/559 (12%)
Query: 7 AHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
A++ + A + + ++ R + QF +AR L G++ + +A N
Sbjct: 8 ANLADVIRAQAKTRGDEILYEFEGRITSFAQFDAHTNRIARALAASGVKPNERIAYLGKN 67
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRP-VMLVTDESSDSWYLELQHTA 125
S+ Y E ++AP+N+R + E + + + ++ V E D +
Sbjct: 68 SDIYFELWAGAMKANVVIAPVNWRLAGPEIAYIVEDCKAAILFVGPEFVDQ--VRGLTDQ 125
Query: 126 IPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
IPS+R ++ + DF RD +D + + AP I +TSGT
Sbjct: 126 IPSVRAIITTEGGAPEWQDFAQWRDAQPSDDPQ----------VAVAPSDIAIQLYTSGT 175
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYGE------DDVYLHTAPLCHIGGLSSAMAMLMV 236
TG PKG ++SH+ + SL + E DDV L P+ HIGG M +
Sbjct: 176 TGKPKGAMLSHANFL--SLVRAGRDNTPEWNIWSSDDVSLIAMPVFHIGGSGWGMMSIYH 233
Query: 237 GACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGG 296
GA V +F+ L+ EQ +T L VPA M + R ++ R +K +L G
Sbjct: 234 GAKGVIAREFDPTKVLDFFEQAKITKLFMVPAAMQFVVRQPRAREVDFSR--LKYMLYGA 291
Query: 297 GGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNS 356
+P+ L+KE + F K + YGMTET+ ++ + D +E ++ A
Sbjct: 292 SPIPAALLKECIDVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA-------- 341
Query: 357 VHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
GK P VE+ + DG VG I TR M YW+ A G
Sbjct: 342 ---------GKALPGVEIAILDPDGKPLPPRQVGEIATRSGSNMAGYWNLPEATKKTIDG 392
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
+ WL TGD G +D+ G V++ R I SGGEN+YP EVE+ + HP + + VVG+ +
Sbjct: 393 DNWLRTGDAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESAICDHPDVAEVAVVGVPD 452
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
+ E V A V ++ + + + ++ + + GFK P+ +
Sbjct: 453 DQWGEAVKAVVVMKPGKEATAQDIIGFTRTR-----------------IAGFKTPKS-ID 494
Query: 532 WRKPFPLTSTGKIRRDEVR 550
+ P ++GKI R +R
Sbjct: 495 FIPALPRNASGKILRRHLR 513
>gi|377569587|ref|ZP_09798747.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377533168|dbj|GAB43912.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 528
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 230/524 (43%), Gaps = 51/524 (9%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +Q LA L + G+R+GD +A+ +S +E +LA A IG + PLN+R S
Sbjct: 34 TYRQLDDRANRLANVLRDRGIRAGDRIAVLGKSSPEIIETVLAAAKIGAVTVPLNWRLSV 93
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + R ++V +L+ A+ + F + R L+ +
Sbjct: 94 RELGEVVDDARARLIVCHRD----FLD----AVTEILSGADTVMEPIAFGDPRQPLSYEQ 145
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
L S P H + V+ +TSGTTG PKGV+ S++ L + A G+ +
Sbjct: 146 LLATSSPDDP-GHVGDADDVVLQLYTSGTTGRPKGVLTSNTNLGACTQAG-GPWGFDDSS 203
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
V L PL HIGGL A+ L GA +V I F S L+ + + +T++ VP ++ L
Sbjct: 204 VSLCAMPLFHIGGLGWALVGLANGAHNVVIADFTPDSLLDTLVRERITNVFLVPTVIGML 263
Query: 274 ATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMT 333
+ + G +++ I G + L++ +F L YG+TET ++T
Sbjct: 264 VDVPGADQADVG--ALRSIAYGSAPITPALLRRTLRTF-GTPLFQVYGLTETHGAVT--- 317
Query: 334 LYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRIL 388
QL A + P H + VG+P P VEL + + S G I
Sbjct: 318 ----------QLDAADHSTDPERAHLLR--SVGRPYPWVELTIRTASGTEATSGEQGEIC 365
Query: 389 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
R Y + + + WL TGDIG +D G V++ R + +GGENVYP
Sbjct: 366 IRTPQATRGYHRRDAETAATIDADGWLHTGDIGRVDADGYVYVTDRLKDMVITGGENVYP 425
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
EVEAVL HP + + VVG+ + E V A V + +E++
Sbjct: 426 TEVEAVLGDHPDVAQVAVVGLPHDTWGEEVTAFVVPAPGHEPTEAD-------------- 471
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
LR R + L G+K P+ V PL +TGKI + +R +
Sbjct: 472 --LRAFARSR-LAGYKVPKT-VHIVSALPLGATGKILKRSLREQ 511
>gi|153005842|ref|YP_001380167.1| AMP-binding domain-containing protein [Anaeromyxobacter sp.
Fw109-5]
gi|152029415|gb|ABS27183.1| AMP-dependent synthetase and ligase [Anaeromyxobacter sp. Fw109-5]
Length = 546
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 150/553 (27%), Positives = 235/553 (42%), Gaps = 65/553 (11%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R ++V++ T ++ + LAR LL G+R GD V + + N EW++ A
Sbjct: 33 EREALVSVQQGYRATYRELWEQTSELARALLVRGVRKGDRVGVWSPNR---YEWVVLQYA 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYLELQHTA---IPSLRWH 132
A +G I+ +N + E A+ LV + + Y+ + P LR
Sbjct: 90 CARVGAILVNVNPAYRVHELEHALRHAGVSTLVLARAFRQADYVSMVREVRLRCPELRQT 149
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+ + +D L+ + L RSL F + + I +TSGTTG PKG +S
Sbjct: 150 IVIDDEWTDLRQDARRLSEEELSNVE-RSLQF------DEPINIQYTSGTTGFPKGATLS 202
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKS 250
H ++ + Y E D P H G+ + IP FE ++
Sbjct: 203 HHNILNNGYFVGQHLRYTEHDRVCIPVPFYHCFGMVMGNLACTSAGATMVIPAESFEPRA 262
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
+ V++ TSL VP + +A L + S++ + G P E+MK
Sbjct: 263 VMRTVQEERCTSLYGVPTMF--IAELEHPEFASFDFSSLRTGIMAGSPCPIEVMKRVQRD 320
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
++ YGMTETS T + DP + VG+ P
Sbjct: 321 MHMPEVTICYGMTETSPVSTQSRVNDPL--------------------DKRVSTVGQVHP 360
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
HVE+K+ + V G + TRG VML YWD A + W+ TGD+ ++D
Sbjct: 361 HVEIKIVDPTTGRVVPRGAPGELCTRGYSVMLGYWDDAAATRAAIDAGRWMHTGDLATLD 420
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G V +VGR + GGENV+P EVE L PGI + V+G+ +A+ E ++A V+L
Sbjct: 421 AEGYVKIVGRIKDMVLRGGENVFPREVEEFLYTIPGISDVQVIGVPDAKYGEELMAWVKL 480
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
R + L E +R+ CR K T +K PR + + FP+T TGK+
Sbjct: 481 RPG----------------VTLDGEAIRRLCRGKIAT-YKIPRYY-KFVDAFPMTVTGKV 522
Query: 545 RRDEVRREVMSHL 557
++ +R + L
Sbjct: 523 QKFRMRELAIREL 535
>gi|423377293|ref|ZP_17354577.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG1O-2]
gi|423463468|ref|ZP_17440236.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG6O-1]
gi|401639102|gb|EJS56842.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG1O-2]
gi|402421669|gb|EJV53917.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG6O-1]
Length = 481
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 250/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ G VA+ N + I A++++G + LN R S
Sbjct: 29 TFMQLHEKVVSVCERLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + + S ++ A I
Sbjct: 89 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSFAEVMNGSKAE---------ASI 132
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ +SL E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 133 QEEFSL-----------EEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDD 181
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 182 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 241
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 242 --LERLGEETYP--SSLRCMLLGGGPAPKSLLETCVEK--GIPVYQTYGMTETSSQICTL 295
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 296 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 334
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 335 VKGPNVTGGYFNREDATRETIQNG--WLYTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 392
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+A+ ESW Q + +S + +
Sbjct: 393 PAQIEEVLLSHPAVAEGGVVGMAD--------------ESWGQVPAAFVVKSGE-----V 433
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E + C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 434 TEEEILHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 478
>gi|392413357|ref|YP_006449964.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfomonile
tiedjei DSM 6799]
gi|390626493|gb|AFM27700.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfomonile
tiedjei DSM 6799]
Length = 518
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 217/507 (42%), Gaps = 57/507 (11%)
Query: 49 LLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVML 108
L +G+ GD VA+ N ++E LA + +G I P+N+R + E I RP +
Sbjct: 47 LQSLGIEKGDRVAVLLENCPEFIELYLACSRLGAIFVPINFRLAAPEVDYLIRHSRPRLF 106
Query: 109 VTDESSDSWYLELQHTAI-PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS 167
V + + + L + P L V + S+ + D+ T +G + P
Sbjct: 107 VFSKRFMNTFQSLDSESYRPPLLAAVVGDTKPSNRIFNYDLDTRS-FEGKAPFITPSLGP 165
Query: 168 WAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGL 227
PE +I +TSGTTG PKG V+SH L D L PL H GGL
Sbjct: 166 ADPEEPHVIMYTSGTTGRPKGAVLSHRKTFFNCLNAEIFFQLSFQDNMLVMLPLFHSGGL 225
Query: 228 S-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR 286
A L GA V P+F+ +E+ +T L+ VP + +L+ V +G
Sbjct: 226 FIQASPCLFKGATLVIHPRFDPIKTYRDIERFKITKLLGVPTV---FRSLLSVDPRERGD 282
Query: 287 -DSVKKILNGGGGLPSELMKEA-TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQ 344
S+ GG + EL+ E N FP ++ M +T +S+ + ++ PG
Sbjct: 283 LSSLHVCAIGGEKVTHELLVECRENGFPLRQI-----MGQTETSILLWASEEESIARPG- 336
Query: 345 LPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYW 399
VG+P H E+ + + VG I+ RG+ +M YW
Sbjct: 337 -------------------TVGRPVFHAEVTLVDKQGKRVSPNEVGEIVVRGSIMMKEYW 377
Query: 400 DQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHP 459
+ + +G WL TGD+ +DD G +LV R SGGENVYP EVE VL +HP
Sbjct: 378 QDPVQTEQIFSGG-WLRTGDLARMDDDGYFYLVDRAKDMYISGGENVYPAEVERVLKEHP 436
Query: 460 GIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN 519
+ VVG + E A + LR K+ L+ ++L C+E+
Sbjct: 437 AVEDAAVVGDFHELWGECGHAFLLLR----------------KDSSLTEDMLIAFCKER- 479
Query: 520 LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
L +K PR + + FP T GK+R+
Sbjct: 480 LASYKLPRK-ITFCVSFPRTPLGKVRK 505
>gi|402899613|ref|XP_003912785.1| PREDICTED: LOW QUALITY PROTEIN: acyl-CoA synthetase family member
2, mitochondrial [Papio anubis]
Length = 642
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 147/589 (24%), Positives = 257/589 (43%), Gaps = 89/589 (15%)
Query: 9 ICQCLSRIA--AVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN 66
+ +CL A +R ++V + N T Q ++V A GLL +GL GD + + N
Sbjct: 101 VGRCLEATAQRVPEREALVDLHENVRLTFAQLKEEVDKAASGLLSVGLCKGDRLGMWGPN 160
Query: 67 SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI--RPVMLVTDESSDSWYLELQHT 124
S ++ LA A G I+ +N + E + + + ++ + +Y L+
Sbjct: 161 SYAWVLIQLATAQAGIILVSVNPAYQATELEYVLKKVGCKALVFPKQFKTQQYYNILKQI 220
Query: 125 A---------------IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWA 169
+P L +S+ + + ++L A + + + +
Sbjct: 221 CPEVENAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVLAAGSTQQHLEQLQHIQQFLS 280
Query: 170 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT----------- 218
+ I FTSGTTGSPKG +SH ++ S +I+G + + LH
Sbjct: 281 CHDPINIQFTSGTTGSPKGATLSHYNIVNNS----SILG---ERLKLHEKTPEQLRMILP 333
Query: 219 APLCH-IGGLSSAMAMLMVGACHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATL 276
+PL H +G + M LM GA + P F K ALEA+ + + L P + D+
Sbjct: 334 SPLYHCLGSVGGTMMCLMYGATLILASPVFNGKKALEAISRERGSFLYGTPTMFVDILN- 392
Query: 277 IRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
+ + D +++ + G P EL++ N L+ AYG TE S
Sbjct: 393 ---QPDFSSYDISTMRGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENS-------- 441
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRIL 388
P F N ++V Q + VG+ PH E ++ + + + G +
Sbjct: 442 -----------PVTFANFPEDTVEQ-KAESVGRIMPHTEARIMNMEAGMLAELNTPGELC 489
Query: 389 TRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYP 448
RG VML YW + + W TGDI ++++ G +VGR I GGEN+YP
Sbjct: 490 IRGYCVMLGYWGEPQKTEEAVDQDKWYRTGDIATMNEQGFCKIVGRSKDMIIRGGENIYP 549
Query: 449 EEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSS 508
E+E HP + + VVG+ + R+ E + AC+RL++ + ++
Sbjct: 550 AELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEE----------------TTA 593
Query: 509 EVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
E ++ C+ K ++ FK PR ++++ +PLT++GKI++ ++R ++ HL
Sbjct: 594 EEMKAFCKGK-ISHFKIPR-YIVFVTNYPLTTSGKIQKFKLREQMERHL 640
>gi|228938137|ref|ZP_04100756.1| Acyl-CoA synthase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228971012|ref|ZP_04131649.1| Acyl-CoA synthase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977616|ref|ZP_04138006.1| Acyl-CoA synthase [Bacillus thuringiensis Bt407]
gi|228782086|gb|EEM30274.1| Acyl-CoA synthase [Bacillus thuringiensis Bt407]
gi|228788821|gb|EEM36763.1| Acyl-CoA synthase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821536|gb|EEM67542.1| Acyl-CoA synthase [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 516
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 241/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCHEFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G + P+N+R KE S + ++V +++ +S W +E +
Sbjct: 77 GAVFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 136
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 137 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 174
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 175 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 234
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ T S+K + GG + L+K
Sbjct: 235 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVK 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 292 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 343
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 344 NEDAPAEPDDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 399
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 400 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 458
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 459 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 501
Query: 544 IRR 546
+++
Sbjct: 502 LQK 504
>gi|393780324|ref|ZP_10368542.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608796|gb|EIW91634.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 542
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 237/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ + T +F V +A+GL+ +G++ GD V I + N EW L A
Sbjct: 35 KEALISVHQDYRVTYTEFYAQVTAVAKGLIALGVKQGDRVGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + + S Y ++ A +LR V
Sbjct: 92 AKIGAIMVNINPAYRTSELIYVINQSGISYIFAAPQFKSSNYKKMIDDAREFTETLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G F+ + +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGEGWQHFLAHGEKVTDEKL-------LSFEERVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + Y E D P H G+ + IP F++
Sbjct: 205 HNILNNGYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNIACTTHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LEAVE+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LEAVEKEKCTSLYGVPTMF--ISELYVLDKQPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T + P + Q VG H
Sbjct: 323 NMHEITICYGMTETSPVSTQTKIGAP--------------------FEKQIYSVGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 363 LEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGDLAMMDE 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYKGVMDAQVIGVPSKKYGEEVMAWIKPK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E + L+ E L C+ + + +K PR W+ + FP+T +GK
Sbjct: 483 EG----------------VTLTEEELHDFCKGR-IAHYKVPR---YWKFVEEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|352101855|ref|ZP_08959002.1| acyl-CoA synthetase [Halomonas sp. HAL1]
gi|350600309|gb|EHA16377.1| acyl-CoA synthetase [Halomonas sp. HAL1]
Length = 509
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 229/530 (43%), Gaps = 65/530 (12%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAP 86
I G + F Q + LA L + G+ DIVA+ NS +LE A +++G + P
Sbjct: 22 IYGEERVSYNAFDQRIRRLAALLKQRGIGEDDIVAVFMKNSPAFLEVAFATSYLGAVFLP 81
Query: 87 LNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+N+R + E + + +L DE + T++ + HV + + S ++R
Sbjct: 82 VNFRLAANELAHILKDAGAKLLFIDE---------ELTSVCEIDQHVVVVDTMSQHDSRR 132
Query: 147 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
+ + D+ LP + + +TSGTT PKGV+ S+ + + +
Sbjct: 133 -LSSPDL-------PLPDAVPRRSDQLFRLMYTSGTTARPKGVMHSYENFYWKCMDHVIA 184
Query: 207 VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLIT 265
+ +D L PL H+G +A+L G +F ++ AL ++EQH ++ T
Sbjct: 185 LNLTAEDKLLTVGPLYHVGAFDLPGVAVLWRGGTICLQREFIAEDALASIEQHQLSCAWT 244
Query: 266 VPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTET 325
P ++ + + ++ S++ + GG P +++ T F A+ I YG+TE+
Sbjct: 245 APVMLNQILSFESPERF--DLSSLRWCIGGGEKTPESRIRDFTRVFTSARYIDGYGLTES 302
Query: 326 SSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV- 384
S T M PG + G+ G+ HVE+++C + +
Sbjct: 303 CSGDTLMP--------PGMEIEKIGST-------------GRALAHVEIRICDEQGHPLP 341
Query: 385 ----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 440
G I G V YW+ + GE W TGDIG +D G +++ RR I
Sbjct: 342 PNTDGEICLCGPKVTRGYWNDPVKTAESFFGE-WFRTGDIGHLDGDGFLFVTDRRKDMIL 400
Query: 441 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 500
+G ENV EVE V+ P + VVG+ + + E +VA V LRE S S
Sbjct: 401 TGAENVASSEVENVIYLLPQVAEAAVVGLPDEQWGERLVAVVVLREGKTLSYSQ------ 454
Query: 501 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L QHCR +L FK P+ ++ + P +GKI + E+R
Sbjct: 455 ----------LEQHCR-GHLANFKVPKQLLI-SEGLPRNPSGKILKRELR 492
>gi|146292779|ref|YP_001183203.1| AMP-binding protein [Shewanella putrefaciens CN-32]
gi|386313458|ref|YP_006009623.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
gi|145564469|gb|ABP75404.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens CN-32]
gi|319426083|gb|ADV54157.1| AMP-dependent synthetase and ligase [Shewanella putrefaciens 200]
Length = 570
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 242/548 (44%), Gaps = 68/548 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVAFIGGIVAPLNYRWSFK 94
+Q++ + LA GLL +G++ GD V I S N EW L A A IG I+ +N + +
Sbjct: 59 RQYLAKIDALATGLLTLGIKPGDRVGIWSPNNIEWCLTQ-FATAKIGAIMVCINPAYRPE 117
Query: 95 EASRAITSI--RPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E A++++ R V + D+ S YLE LQ A+P L + + +G
Sbjct: 118 ELQYALSNVGCRAV-ICADKFKSSNYLEMLYELAPELTSCPAGKLQAKAVPELEFVIRMG 176
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
S + D L DI + + A+ I FTSGTTGSPKG +SH +
Sbjct: 177 KEKSTGMLNFDDLLIDITDDDKVMLESIAKELSSYDAINIQFTSGTTGSPKGATLSHHNI 236
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK-FESKSALEA 254
+ + + D PL H G+ ++ L GA VF + F+ + L+
Sbjct: 237 LNNGYLVAEAMKFTCHDKLCIPVPLYHCFGMVLGSLVCLAKGAAAVFPGESFDPLTTLQV 296
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+EQ T+L VP + +A L + T S++ + G P E+M+ N
Sbjct: 297 IEQERCTALHGVPTMF--IAELEHPEFTRFDLSSLRTGVMAGATCPEEVMRRVQNLMYMK 354
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+++ YG TE S L +T D +E + + VG+ PH E+
Sbjct: 355 EVLIGYGQTE-CSPLNHITEIDSPIEK-------------------RVLTVGRALPHTEV 394
Query: 375 KVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
K+ + + G + +RG +M YW+ + WL +GDIG +D+ G V
Sbjct: 395 KIIDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAATIDSAGWLHSGDIGQMDEQGYV 454
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E L H + V G+ + + E V A +++R
Sbjct: 455 QIVGRIKDMIIRGGENIYPREIEEKLYTHKDVQDAAVFGVQSDKYGEEVCAWIKVRSGSI 514
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
+E++ +R EK FK PR ++ + + +P+T TGKI++ ++
Sbjct: 515 ITEAD----------------IRHFLTEK-FAYFKVPR-YIKFVEQYPMTVTGKIQKFKM 556
Query: 550 RREVMSHL 557
R + L
Sbjct: 557 RELMYQEL 564
>gi|423667635|ref|ZP_17642664.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VDM034]
gi|423676301|ref|ZP_17651240.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VDM062]
gi|401303300|gb|EJS08862.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VDM034]
gi|401307422|gb|EJS12847.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VDM062]
Length = 496
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 247/553 (44%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ ++ ++ G+ +AI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ + L +Q+ + ++
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGATVLFVEETFQNMALSMQN--VTYVQR 125
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+S+ S LK R + + IIC+TSGTTG PKG V+
Sbjct: 126 VISIKS----------------LKEIEDRKIDNFEEINESASFIICYTSGTTGQPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTVHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIVPRKFEPTI 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E++ VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKYKVTVVMGVPTIHQALINCAKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ FM + G +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTV-FMLSEEEARRKVGS--------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
+ + + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCDYVLIDENKNKVEIGEVGELLIRGPNVMKGYWNRPDATEETIQDG--WLYTGDLAKV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V+G + + E+ +A +
Sbjct: 382 DEEGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSEVCEVAVIGTQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L EV+ HCR L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSCSVLTEKEVI-DHCR-LFLAKYKVPKEIVFLEE-LPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLANQLKSR 496
>gi|317143108|ref|XP_001819194.2| hypothetical protein AOR_1_1496164 [Aspergillus oryzae RIB40]
Length = 563
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 257/556 (46%), Gaps = 84/556 (15%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
Q Q ++A+GLL +G+ GD VAI + + E + ++AVA IG ++ LN ++F E
Sbjct: 51 QVLCQHTQDIAKGLLAMGIGRGDRVAIFSGDDERFAALVVAVARIGAVLVVLNKTFTFLE 110
Query: 96 ASRAI----TSIRPVMLVTDESSDSWYLE-LQHTAIPSLRWHVSLGSSSSDFVNKRDMLT 150
RAI TS+ + + + S + ++ +Q +P L+ V + +D+V+ + LT
Sbjct: 111 CDRAIRHTETSLFFIGDMVNFGSTRFLIQHIQTHPVPGLKQTVLI---RTDYVDTHETLT 167
Query: 151 AD--ILKGYSLRSLPF---THSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 205
D +L G S+ S V + FTSGT G PK ++SH +I A
Sbjct: 168 WDDVLLLGNSVPQQALHQAQRSVQCHDTVYLQFTSGTAGLPKAAMLSHFGIINNGRMCGA 227
Query: 206 IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSL 263
+ DD+ PL H GL S + + + +P F++ + ++A++++ T L
Sbjct: 228 RLDLNPDDIVCCPPPLFHAFGLVSGLICSLACGATIVLPSRDFDASAVVDALKRYGCTVL 287
Query: 264 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VP + +A L +++ +V+ + GG + L+ E +F L YGMT
Sbjct: 288 HGVPTMF--VAILQQLQHRKVKVKTVRAGMVGGMKVAPSLLDEIQATFSPMDLRIIYGMT 345
Query: 324 ETSSSLTFMTL-YDPT---LETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD 379
ETS+ +FMT DP LET VGK PHV+ KV D
Sbjct: 346 ETSAG-SFMTAATDPAREKLET-----------------------VGKALPHVQAKVV-D 380
Query: 380 GSSHV------------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+H+ G +L +G + + L + G +W+ TGD SID+ G
Sbjct: 381 SQNHILPKGIRGELCISGYLLQKGYYKNEEKTAEALVRDE--NGVIWIHTGDEASIDEKG 438
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ GR I GGEN+YP E+E L++HP I +VG+ + + E+V A ++
Sbjct: 439 YCRITGRIKDIIIRGGENIYPTEIEERLMEHPDIEQAAIVGLKDDKYGEVVAAFLQ---- 494
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP------FPLTST 541
S ++ S N +VL +H KAP + V W P +P+T +
Sbjct: 495 ---SLPQHNRPSLNDVKDWIWQVLGRH---------KAP-VHVFWVGPGDPIGQYPVTGS 541
Query: 542 GKIRRDEVRREVMSHL 557
GKIR+D V RE+ +++
Sbjct: 542 GKIRKD-VLREIGNNM 556
>gi|87199233|ref|YP_496490.1| long-chain-fatty-acid--CoA ligase [Novosphingobium aromaticivorans
DSM 12444]
gi|87134914|gb|ABD25656.1| AMP-dependent synthetase and ligase [Novosphingobium
aromaticivorans DSM 12444]
Length = 527
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 153/550 (27%), Positives = 239/550 (43%), Gaps = 71/550 (12%)
Query: 15 RIAAVKRNSVVTITG-NRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEW 73
R A R V + G +R T + + +A GL +G+ GD +A NS Y
Sbjct: 25 RFWAEDRPQGVALDGPDRKLTYGELEETTARIAGGLAAMGIAKGDRIAWFGKNSTLYFAL 84
Query: 74 ILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV 133
A A +G ++ P+ +R + EA+ + M+ E + L A+P++ H
Sbjct: 85 FFAAARLGAVMVPIGWRLAPVEATWIAGDAQARMVFLGEGFEG--LADAFAALPAVG-HC 141
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ + +++ L + F + A + AV+ +TSGTTG+PKG V+S+
Sbjct: 142 LTQAEAWHWID-------------GLPAGAFEPAGA-DDAVLQLYTSGTTGNPKGAVLSN 187
Query: 194 SALIVQSLAKIAI------VGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFE 247
L L K +I +D+ L P HIGG + + G + + +FE
Sbjct: 188 RNLF--GLRKQSIGNDQPYTTMTDDEAILVAMPCAHIGGTGLGVMAIGAGLPGIVLAEFE 245
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
++ +AVEQ VT VPA + L R VK I+ G +P L++E
Sbjct: 246 PRAVFDAVEQKGVTRFFIVPAALQMLLNHPDCASVDFSR--VKYIIYGASPIPLVLLREC 303
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
F A+ I AYGMTET+ ++ LP +V N + GK
Sbjct: 304 IAMF-SAEFIQAYGMTETTGTICM-------------LPPEDHDVNGNQRMR----SAGK 345
Query: 368 PAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
P P VE++V + G + +G I TR ++ ML YW+ A T + W+ TGD G
Sbjct: 346 PLPGVEVRVIDENGRSLGPNEIGEIQTRSSNNMLGYWNLPEATAKTMTPDGWISTGDAGY 405
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA-C 481
+D+ G V++ R I SGGENVYP +VE+ + HP + + V+G+ + + E V A C
Sbjct: 406 LDEDGYVYMHDRIKDMIISGGENVYPAQVESAIYGHPDVQEVAVIGVPDEKWGEAVKAVC 465
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V + + + RE+ L GFK P+ V P +
Sbjct: 466 V-----------------PKPGHTIDPQSIIDWTRER-LAGFKVPKS-VDVIDALPRNPS 506
Query: 542 GKIRRDEVRR 551
GKI R +R
Sbjct: 507 GKILRRTLRE 516
>gi|311067513|ref|YP_003972436.1| long-chain-fatty-acid--CoA ligase [Bacillus atrophaeus 1942]
gi|419822498|ref|ZP_14346078.1| long-chain-fatty-acid--CoA ligase [Bacillus atrophaeus C89]
gi|310868030|gb|ADP31505.1| long-chain-fatty-acid--CoA ligase [Bacillus atrophaeus 1942]
gi|388473479|gb|EIM10222.1| long-chain-fatty-acid--CoA ligase [Bacillus atrophaeus C89]
Length = 513
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 240/547 (43%), Gaps = 54/547 (9%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L AAVK + I G T ++ + + A GL ++G+ GD +A+ N+ ++
Sbjct: 7 LEETAAVKPDKTACIFGGESITYEELRESIFRFANGLQDLGMEKGDHLALLLGNTPDFVI 66
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
G +V P+N ++ E +T+ +V + Y E H A+P + H
Sbjct: 67 SFFGALKAGIVVVPINPTYTPTEIGYMLTNSDVKAIVGIDQLLPVY-ERMHEALPKVE-H 124
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHS-----WAPEGAVIICFTSGTTGSPK 187
V L +S++ D + ++ P S + + +I +TSGTTG PK
Sbjct: 125 VILSQTSTEEPEAEDPQVKTKMTTFTKMMNPINRSRSYPKLSHDDTAVILYTSGTTGKPK 184
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKF 246
G +++H L + +G E D + P+ H+ L+ M A LM GAC + P+F
Sbjct: 185 GAMLTHQNLYSNANDVAGYLGMDERDKIVAALPMFHVFCLTVCMNAPLMSGACVLIEPQF 244
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
+ + V+ T VP + L K + S++ ++GG +P L+
Sbjct: 245 SPAAIFKLVKDREATIFAGVPTMYNYLYQY--EKGSPHDFASIRLCISGGASMPVALLNA 302
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVC-- 364
F A ++ YG++E S +T ++P G+ P G++ N +H V
Sbjct: 303 FEEKFSVA-ILEGYGLSEASP----VTCFNPF--DRGRKP---GSIGTNILHVENKVVDP 352
Query: 365 VGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFL-AKPSVSTGEVWLDTGDIGSI 423
+G+ P VG ++ +G +VM Y+ + K ++ G WL TGD+
Sbjct: 353 LGRELP----------DHQVGELIVKGPNVMKGYYKMPIETKHALKDG--WLYTGDLARR 400
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G ++V R+ I GG NVYP EVE VL H + VV+G+ +A+ E V
Sbjct: 401 DEDGYFYIVDRKKDMIIVGGYNVYPREVEEVLYSHEDVKEAVVIGVPDAKSGEAV----- 455
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
NC K L L+ E + QHC EK+L +K P + + P +TGK
Sbjct: 456 ----------NCYIVPKR--LSLTEEEIMQHC-EKHLAKYKRPAAIIFLEE-IPKNATGK 501
Query: 544 IRRDEVR 550
I R +R
Sbjct: 502 ILRRALR 508
>gi|229118345|ref|ZP_04247701.1| 2-succinylbenzoate--CoA ligase [Bacillus cereus Rock1-3]
gi|228665175|gb|EEL20661.1| 2-succinylbenzoate--CoA ligase [Bacillus cereus Rock1-3]
Length = 482
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 250/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ G VA+ N + I A++++G + LN R S
Sbjct: 30 TFMQLHEKVVSVCERLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 89
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + + S ++ A I
Sbjct: 90 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSFAEVMNGSKAE---------ASI 133
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ +SL E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 134 QEEFSL-----------EEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDD 182
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 183 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 242
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 243 --LERLGEETYP--SSLRCMLLGGGPAPKSLLETCVEK--GIPVYQTYGMTETSSQICTL 296
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 297 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 335
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 336 VKGPNVTGGYFNREDATRETIQNG--WLYTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 393
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+A+ ESW Q + +S + +
Sbjct: 394 PAQIEEVLLSHPAVAEGGVVGMAD--------------ESWGQVPAAFVVKSGE-----V 434
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E + C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 435 TEEEILHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 479
>gi|375097955|ref|ZP_09744220.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374658688|gb|EHR53521.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 518
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 160/569 (28%), Positives = 249/569 (43%), Gaps = 91/569 (15%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I +++ A ++ + + G R T + LA L +G+R GD VA +NS
Sbjct: 5 IGAWVTKRAFLQGDYTAFVAGERTFTYADADRRTDQLASALAGLGVRRGDRVAALMVNSV 64
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI-- 126
+LE +LA A +G I+ P+N R + E ++ D +D Q T I
Sbjct: 65 EFLETLLACAKLGAIMVPINVRLAAVEVG---------FILGDSGADVLVFSGQFTDIVR 115
Query: 127 -----PSLRWH--VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
P +R V +G + D L A ++ + T + ++ +T
Sbjct: 116 GALTEPGVRVRHAVQVGEGGYERGPSYDELLASASPDFAAADVAGTDT------AMLMYT 169
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVG----YGEDDVYLHTAPLCHIGGLS-SAMAML 234
SGTTG PKG +++H L+ + I ++G DV + AP+ HIGGL ++ +L
Sbjct: 170 SGTTGRPKGAMLTHDNLLWNA---INVLGTEHPLSSRDVTVTVAPMFHIGGLGVHSLPLL 226
Query: 235 MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILN 294
VG +V +P F+ L A+ +H T VPA+ + + + D L
Sbjct: 227 YVGGTNVILPNFDPVGTLTAMAEHRATVQFMVPAMWVAITQV----PNFGSYDLSSLELA 282
Query: 295 GGGGLPSEL-MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
GGG P L M E N I +GMTET+ ++ +
Sbjct: 283 MGGGAPCPLPMIEFLNER-GVPFIEGFGMTETAPLVSIL--------------------- 320
Query: 354 PNSVH-QPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPS 407
NS H + + +G+ A HVE ++ D ++ VG ++ RG ++ YW +P
Sbjct: 321 -NSAHARSKAGSIGRVAMHVEARIVDDDDRDVPTNTVGELVLRGPNIFAGYW----MRPE 375
Query: 408 VSTGEV----WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
+T E W TGD+G +D+ G + LV R+ I SGGENVYP EVE VL +HP +
Sbjct: 376 -ATAEAFRNGWFHTGDLGRMDEEGYITLVDRKKDMIISGGENVYPIEVEQVLFKHPKVAD 434
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
VVG + R E VVA V + ++EL+ CRE+ L F
Sbjct: 435 AAVVGGPDPRWGERVVAVV-------VPDPGAGPDPGSEELV-------TWCRER-LAHF 479
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
K PR V + P +TGK+ + +R +
Sbjct: 480 KCPRE-VHFVDALPRNATGKLLKTVLREK 507
>gi|421872069|ref|ZP_16303688.1| O-succinylbenzoate-CoA ligase [Brevibacillus laterosporus GI-9]
gi|372458681|emb|CCF13237.1| O-succinylbenzoate-CoA ligase [Brevibacillus laterosporus GI-9]
Length = 519
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 149/554 (26%), Positives = 247/554 (44%), Gaps = 80/554 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILAVAFI 80
N + IT + T ++ Q V AR L E G+ +G + I A NS Y+ + A+A +
Sbjct: 17 NRIAIITEEQQLTYREMGQKVNQFARFLQQECGVDAGVRIGILAQNSLSYVLLLFAIAKL 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQ-HTAIPSLRW-----HVS 134
GGI PLN R + E + + +L T +L+ ++ + W HVS
Sbjct: 77 GGIAVPLNIRLTANELTYQLEDSGTKVLFTQHEFQPIIEQLETKVSLIQIIWLDHKKHVS 136
Query: 135 LGSS--------SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
+ +DF N ++L+++ L + + + +IC+TSGTTG P
Sbjct: 137 GEEARGLVATAIEADFENAINLLSSEPLIYEKMNA---------KAPYLICYTSGTTGRP 187
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPK 245
KG V++ + ++ + + D + PL HIGG+ A L G V + +
Sbjct: 188 KGAVLTQENMFWNAIHNLTSLDITSSDRSIVLLPLFHIGGIGLFAFPTLFAGGSIVIVGR 247
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F ALE ++Q+ VT ++ VPAI L R + + D SV+ NGG P EL
Sbjct: 248 FHPDKALEMIQQYQVTIVMGVPAIHDAL----RRSQLFSTTDLSSVRWFYNGGAPCPHEL 303
Query: 304 -MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
+ P + +G+TETS ++ ++ D +
Sbjct: 304 ILYYQDRGLPFGQ---GFGLTETSPTVCMLSAEDARHKVG-------------------- 340
Query: 363 VCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
+GKP E+++ + + VG + +G HVM YW+ + + + W T
Sbjct: 341 -SIGKPVLFCEIRLVDEHDQEVPNGEVGELAIKGPHVMKEYWN-LPNETAKAMRNGWFYT 398
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+ D+ G +++ GRR I SGGEN+YP EVE + P + + VVG+A+ + E+
Sbjct: 399 GDLARRDEEGFLYIAGRRKEMIISGGENIYPLEVEQAIGSLPEVAEVAVVGVADEKWGEV 458
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
A V ++E L+ E+LRQ C+ K + +K P+ FV + P
Sbjct: 459 AKAFVVIKEG----------------TTLTEEILRQACQMK-IAKYKIPKYFVFLTE-LP 500
Query: 538 LTSTGKIRRDEVRR 551
+TGKI + ++R
Sbjct: 501 RNATGKINKTALQR 514
>gi|256378700|ref|YP_003102360.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
gi|255923003|gb|ACU38514.1| AMP-dependent synthetase and ligase [Actinosynnema mirum DSM 43827]
Length = 526
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 211/465 (45%), Gaps = 57/465 (12%)
Query: 33 NTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T Q L LA L G+ +GD VA LN W++E + +G + PL++R +
Sbjct: 39 TTWSQLSDRSLRLAAALAGRGVAAGDRVATLTLNHPWFVETVFGANSLGAMAVPLSFRLA 98
Query: 93 FKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS---LRWHVSLGSSSSD----FVNK 145
E + P +V DE L L AIP+ + V LG+ D FV
Sbjct: 99 PPELDYILADCTPSAVVVDER----LLPLLR-AIPATSRVGTVVVLGALPEDAPENFVAY 153
Query: 146 RDMLTADILKGYSLRSLPFTHSWAPEGAV-IICFTSGTTGSPKGVVISHSALIVQSLAKI 204
D LT+ P PE A +I +TSGTTG PKGV++SH + VQ++ +
Sbjct: 154 EDFLTS---------HEPLDPPDVPEDATALIMYTSGTTGRPKGVLLSHLNMQVQAITCV 204
Query: 205 -AIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVT 261
A+ + + DV TAP HI GL S +A ++VG V P F+ ++ L+A E+ T
Sbjct: 205 RAMEIFDDSDVGFLTAPFFHIAGLGSIVANILVGGTVVIHPLGAFDPEAVLDAYEREGAT 264
Query: 262 SLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAY 320
+ VP L V+K RD +I++ G S+ ++ FP A ++ +
Sbjct: 265 VVFNVPQQWDLLCAQPGVEK----RDLKLRIISWGAAPASDATLRAMAEKFPDALNVAVF 320
Query: 321 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD- 379
G TETS +T + + +L G VGKP P ++ +V +
Sbjct: 321 GQTETSP-ITCVLRGEDSLRKLGS--------------------VGKPIPTIQYRVVDEL 359
Query: 380 ----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 435
VG I+ RG V YW + G W +GD+ DD G VW+V R+
Sbjct: 360 MADVAPGEVGEIVYRGPTVTRGYWRKPQETEEAFAGG-WFHSGDLVRQDDEGFVWVVDRK 418
Query: 436 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
I SGGEN+Y EVE + +HP ++ + VVG + R ++ VA
Sbjct: 419 KDMIISGGENIYCAEVENAVSEHPSVLEVAVVGRPDERWGQVPVA 463
>gi|423579198|ref|ZP_17555309.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD014]
gi|401218985|gb|EJR25653.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD014]
Length = 520
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 242/545 (44%), Gaps = 76/545 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F++++ L +++ +T+ P + L ++K D S+K + GG + L
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWNML-----LQKDLAQYDLTSMKIGIYGGAAMAPAL 291
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+KE L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 292 VKECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIV 343
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGS 422
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G
Sbjct: 344 KPNEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGY 399
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
D G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 400 FDKDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVI 459
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTST 541
K+ ++ L +C+E + L +K PR + L+ P ++
Sbjct: 460 V-----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNAS 501
Query: 542 GKIRR 546
GK+++
Sbjct: 502 GKLQK 506
>gi|365161675|ref|ZP_09357814.1| O-succinylbenzoate-CoA ligase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423423029|ref|ZP_17400060.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG3X2-2]
gi|423505520|ref|ZP_17482111.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HD73]
gi|423638837|ref|ZP_17614489.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD156]
gi|449087666|ref|YP_007420107.1| O-succinylbenzoate-CoA ligase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|363620097|gb|EHL71397.1| O-succinylbenzoate-CoA ligase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401117337|gb|EJQ25174.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG3X2-2]
gi|401269839|gb|EJR75866.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD156]
gi|402452698|gb|EJV84510.1| O-succinylbenzoate-CoA ligase [Bacillus cereus HD73]
gi|449021423|gb|AGE76586.1| O-succinylbenzoate-CoA ligase [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 518
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ S+K + GG + L+K
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVK 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 294 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 346 NEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 401
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 402 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 460
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 461 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 503
Query: 544 IRR 546
+++
Sbjct: 504 LQK 506
>gi|296140997|ref|YP_003648240.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
gi|296029131|gb|ADG79901.1| AMP-dependent synthetase and ligase [Tsukamurella paurometabola DSM
20162]
Length = 541
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 236/566 (41%), Gaps = 89/566 (15%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
R ++V + R T + + + A GL+ G+R GD V + A N+ EW++
Sbjct: 33 DRTALVDVPSGRRWTYDELLAAARSFAAGLVRKGIRRGDRVGVWAPNTP---EWVIVQFG 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVT----DESSDSWYLELQHTAIPSLR-- 130
A G I+ LN + +E A+ V + T S + LE P LR
Sbjct: 90 TALAGVILVNLNPSYRQRELEYALNQSGIVAVFTMTAFKTSEYAAMLEAARPEAPDLRDV 149
Query: 131 -------WHVSLGSSS----SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFT 179
W L + S +D + D L+AD A+ I +T
Sbjct: 150 VTFDGAAWAEYLAAPSDDELADLTDLGDQLSAD-------------------DAINIQYT 190
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGA 238
SGTTG PKG ++H ++ ++ Y E D P H G + +A + GA
Sbjct: 191 SGTTGFPKGATLTHRNILNNGYLVGELLNYTEQDSICIPVPFYHCFGMVMGNLAAVTHGA 250
Query: 239 CHVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGG 297
V P F + AL AV TSL VP + +A L + S++ + G
Sbjct: 251 AMVIPGPAFVPQDALAAVAAEKCTSLYGVPTMF--IAELALAEFDSYDLSSLRTGIMAGS 308
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
P E+M++ + ++ YGMTETS T T D LE
Sbjct: 309 PCPEEVMRKVVDRMGMTEVSICYGMTETSPVST-QTRIDDALEL---------------- 351
Query: 358 HQPQGVCVGKPAPHVELKVCS--DGS----SHVGRILTRGAHVMLRYWDQFLAKPSVSTG 411
+ VG+ PH+E++V DG+ VG + TRG VM YW+
Sbjct: 352 ---RVGTVGRVGPHLEIRVIDPIDGTVMPRGEVGELCTRGYSVMKGYWNNEEKTAEAIDA 408
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
E W+ TGD+ ++DD G V + GR + GGEN+YP E+E L HP I+ V+G+ +
Sbjct: 409 EGWMHTGDLATMDDAGYVRVTGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPD 468
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
+ E ++A ++LRE + E L+ E + K PR +V
Sbjct: 469 EKYGEELMAWIQLREGVDS---------------FTVEDLKAFA-EGKIARHKIPR-YVH 511
Query: 532 WRKPFPLTSTGKIRRDEVRREVMSHL 557
FP+T +GKIR+ ++R E + L
Sbjct: 512 VVTEFPMTVSGKIRKVQMREESVELL 537
>gi|452839539|gb|EME41478.1| hypothetical protein DOTSEDRAFT_176641 [Dothistroma septosporum
NZE10]
Length = 591
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 146/549 (26%), Positives = 241/549 (43%), Gaps = 60/549 (10%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
+Q + + LAR + + G+ GD+VAIS + Y E A ++G + LNY ++ E
Sbjct: 63 RQLRERSIKLARAMSQDGIGKGDLVAISLGSRVEYFETFFACTYLGAALVLLNYAYAESE 122
Query: 96 ASRAITSIRPVMLVTDES----SDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTA 151
+ ++P M+V ++ L T +PS+ + + + D+ +
Sbjct: 123 FLALLKIVKPKMMVASPGFTFYDNTKILPKLATEVPSIGRFIIMDDLEQKYHLSEDLERS 182
Query: 152 DILKGY------SLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIA 205
+ Y + +LP S +P V + FTSG+TG PK V +SH ++
Sbjct: 183 AQYEKYIEQYDAEVSALPEV-SISPHDMVNVQFTSGSTGLPKSVSLSHYNIMNCGRYIWQ 241
Query: 206 IVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVEQHCVTSL 263
V + D PL H G+ ++ V + +P F SK LE +EQ+ T +
Sbjct: 242 QVRITDQDRICQPTPLFHSFGMIVGISTATVAGASLILPNEIFNSKKTLECIEQYKCTGI 301
Query: 264 ITVPAIMADLATLIRVKKTWK-GRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGM 322
VP + T + K+ R ++K + G +P EL+K +FP +L + +GM
Sbjct: 302 YGVPTM---FVTEMEQKEFPDIDRSTIKFGIIAGAAMPPELLKRIVTTFPVPRLYTCWGM 358
Query: 323 TETSSSLTFMTLYDP---TLETPGQL-PQAFGN-VTPNSVHQPQGVCVGKPAPHVEL-KV 376
TE SS +T M DP ++T G+L P V PN+ GK P E ++
Sbjct: 359 TELSSFVTMMHETDPYEKRIKTAGRLFPHCVAKIVQPNT---------GKVVPWGEKGEI 409
Query: 377 CSDGSSHVGRILTRGAHV--MLRYWDQFLAK-------PSVSTGEVWLDTGDIGSIDDGG 427
+ G + + LRY ++ L P+ + W+ TGD G +D G
Sbjct: 410 VASGYGQMAEYINNKEKTEETLRYHEEDLQPDGVGGIGPAGAQLRKWMHTGDEGYLDPEG 469
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ GR I GGEN+ P E+E +++H I + +VG+ + + E V+A + RE
Sbjct: 470 YFVISGRIKDLIIRGGENIAPMEIEDRIVEHEAIAQVSIVGVPDDKYGEEVLAFLECREG 529
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR-----KPFPLTSTG 542
+W D +R REK L FKAPR F R + +P T++G
Sbjct: 530 -RWDSRPSDDE------------IRAFVREK-LARFKAPRYFFWLRDGRAPEEWPKTASG 575
Query: 543 KIRRDEVRR 551
K+ + +R+
Sbjct: 576 KVSKPHLRK 584
>gi|423455598|ref|ZP_17432451.1| hypothetical protein IEE_04342 [Bacillus cereus BAG5X1-1]
gi|401134235|gb|EJQ41852.1| hypothetical protein IEE_04342 [Bacillus cereus BAG5X1-1]
Length = 518
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 243/536 (45%), Gaps = 58/536 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVTMIERDFPNSSFWYVEDDAPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDYCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ +T+ P + L ++K D S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWNML-----LQKDLDEYDLTSMKIGVYGGAAMAPALVKECKERL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAE 352
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 353 PDDMLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFV 408
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
R + + SGG N+YP EVE L HPG++ + V+G + E VVA V +++ S
Sbjct: 409 ADRVDDMVISGGVNIYPREVEDFLHSHPGVLDVAVLGEPDELWGERVVAVV-VKKDENIS 467
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
E++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 468 EAD----------------LEMYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|392414019|ref|YP_006450624.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|390613795|gb|AFM14945.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 555
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 230/519 (44%), Gaps = 62/519 (11%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LAR L G+ +GD V I LN ++E LA+ +G I P+N+R + E + ++
Sbjct: 59 LARALHSHGVEAGDRVLILMLNRPEFIESFLAINKLGAIAVPVNFRMTPSEIAYLVSDCE 118
Query: 105 PVMLVTDESSDSWYLELQHTAI----PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLR 160
+++T+ L TA+ P+L + G + D D L + G+ +
Sbjct: 119 ARVVITES-----VLAKVATAVRDLDPTLATVIVAGGAGDDGTLHYDELLSAEHPGHPVV 173
Query: 161 SLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTA 219
+P + +I +TSGTTG PKG V++H+ L Q++ + G DV
Sbjct: 174 DIPN------DSPALIMYTSGTTGRPKGAVLTHANLNGQAMTHLFTNGVDLNTDVGFIGV 227
Query: 220 PLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAIMADLATLI 277
PL HI G+ + + L++G V P F L+ + VT + VPA +
Sbjct: 228 PLFHIAGIGNTIFGLLLGRPTVVYPLGAFNPGELLDVLAAEAVTGIFLVPAQWQAVCAEQ 287
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
R + RD ++L+ G S+ L++E +FP A++++A+G TE S +T M L D
Sbjct: 288 RARP----RDLRLRVLSWGAAPASDTLLREMAETFPGAQILAAFGQTEMSP-VTCMLLGD 342
Query: 337 PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRG 391
+ G VGK P V ++ + + VG I+ R
Sbjct: 343 DAIRKLG--------------------SVGKVIPTVAARIVDEDMNDVPVGQVGEIVYRA 382
Query: 392 AHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
+M YW+ A G W +GD+ D+ G +W+V R+ I SGGEN+Y EV
Sbjct: 383 PTLMAGYWNNPQATAEAFAGG-WFHSGDLVRQDEDGYIWVVDRKKDMIISGGENIYCAEV 441
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E VL HP I+ + V+G + + E+ VA +R S + + S + +E L +
Sbjct: 442 ENVLASHPAIVEVAVIGRPHPKWGEVPVAVAVVRSSLESAASATLELDHLEEFLTA---- 497
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L +K P+ + P GK+ + E+R
Sbjct: 498 -------RLARYKHPKALEVIDA-LPRNPAGKVLKTELR 528
>gi|170722329|ref|YP_001750017.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
gi|169760332|gb|ACA73648.1| AMP-dependent synthetase and ligase [Pseudomonas putida W619]
Length = 515
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 152/525 (28%), Positives = 239/525 (45%), Gaps = 64/525 (12%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
LA GL +G+ +G+ VAI A N +E +A+ + P+N R S E R +
Sbjct: 38 RLASGLGALGVATGEHVAILAANRVELVEAEVALYKAAMVKVPINARLSLDEVVRVLEDS 97
Query: 104 RPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLP 163
V L+TD ++ + L + A+P LR ++L D + A +L+ S P
Sbjct: 98 CSVALITD-ATFAQALAERRAALPMLRQVIALEGEGGD------LGYAALLERGS--EAP 148
Query: 164 FTHSWAPEGAVIICFTSGTTGSPKGVVIS---HSALIVQSLAKIAIVGYGEDDVYLHTAP 220
+ A + ++ +TSG++G K ++S AL+ +S+A G DDV H P
Sbjct: 149 CSLDPADDALAVLHYTSGSSGVLKAAMLSFGNRKALVRKSIAS-PTRRSGPDDVMAHVGP 207
Query: 221 LCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVK 280
+ H G+ M +L VGAC++ + +++ + LEA+E+ VT L VPA++ L V+
Sbjct: 208 ITHASGMQ-IMPLLAVGACNLLLDRYDDRLLLEAIERERVTRLFLVPAMINRLVNYPDVE 266
Query: 281 KTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLE 340
+ S+K ++ G + L+K+A F L+ YG ET S +T +T D +E
Sbjct: 267 RF--DLSSLKLVMYGAAPMAPALVKKAIELFGPI-LVQGYGAGETCSLVTVLTEQDHLIE 323
Query: 341 TPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVM 395
GN +Q C G+ +L+V ++ +G I+ +G +M
Sbjct: 324 D--------GN------YQRLASC-GRCYFETDLRVVNEAFEDVAPGEIGEIVVKGPDIM 368
Query: 396 LRYWDQFLAKPSVSTGEVWLD----TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEV 451
YW + T EV D TGD+ ++D G V++V R+ I SGG NVYP EV
Sbjct: 369 QGYW-----RAPALTAEVMRDGYYLTGDLATVDAQGYVFIVDRKKEMIISGGFNVYPSEV 423
Query: 452 EAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVL 511
E V+ P + VVG+ + + E V A V L+ Q L + L
Sbjct: 424 EQVIYGFPEVFEAAVVGVPDEQWGEAVRAVVVLKPDAQ----------------LDAAEL 467
Query: 512 RQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSH 556
+ C + L GFK PR V + P GK+ R VR H
Sbjct: 468 IERC-GRALAGFKKPR-GVDFVTELPKNPNGKVVRRLVREAYWQH 510
>gi|425900342|ref|ZP_18876933.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889460|gb|EJL05942.1| long-chain-fatty-acid--CoA ligase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 564
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 238/549 (43%), Gaps = 68/549 (12%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLN--YRWSF 93
QQ + V AR LL +GL++GD + I A N + A A IG I+ +N YR S
Sbjct: 55 QQLAETVDLHARALLALGLKTGDRLGIWAPNCAQWCISQFASAKIGAILVNINPAYRSSE 114
Query: 94 KE-------------ASRAITSIRPVML--VTDESSDSWYLELQHTAIPSLRWHVSLGSS 138
E A TS ML + E + +LQ +P LR +SL +
Sbjct: 115 LEYVLKQSGCQWLVCAGAFKTSDYHAMLQGLAPELAQQSIGQLQSERLPDLRGVISLDAQ 174
Query: 139 S-SDFVNKRDMLTADILKGYSLRSL-PFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
S F+ + AD+ G S+ +L S P+ AV I +TSGTTG PKG +SH +
Sbjct: 175 PPSGFLPWSQL--ADLGAGVSVEALRERQDSLDPDQAVNIQYTSGTTGFPKGATLSHYNI 232
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEA 254
+ +G G +D + PL H G+ + + P F+ L A
Sbjct: 233 LNNGYMVGESLGLGHEDRLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPNDAFDPLLTLGA 292
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
V + T L VP + +A L + ++ S++ + G P E+M+ + +
Sbjct: 293 VAEEKATGLYGVPTMF--IAMLDQPRRAEFDLSSLRTGIMAGATCPIEVMRRVISEMHMS 350
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
++ AYGMTETS +L+T P + + VG+ P +E
Sbjct: 351 EVQIAYGMTETSPV---------SLQT-----------GPADELELRVTTVGRTQPQLES 390
Query: 375 KVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
K+ + + +G + TRG VML YW+ W+ TGD+ ++++ G V
Sbjct: 391 KIIDEAGNIVPRGTIGELCTRGYSVMLGYWNNPQGTAEAIDQAGWMHTGDLATMNEQGYV 450
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+ GR I GGEN+YP E+E HP + + V+GI ++ E +VA ++
Sbjct: 451 CIAGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSKYGEEIVAWIKFHPGHS 510
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
SE E L+ C+ + + FK PR F + FP+T TGKI++ +
Sbjct: 511 ASE----------------EELQAWCKAR-IAHFKTPRYFKFVEE-FPMTVTGKIQKFRM 552
Query: 550 RREVMSHLK 558
R + L+
Sbjct: 553 REISIEELR 561
>gi|384431610|ref|YP_005640970.1| long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
gi|333967078|gb|AEG33843.1| Long-chain-fatty-acid--CoA ligase [Thermus thermophilus
SG0.5JP17-16]
Length = 548
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 250/540 (46%), Gaps = 70/540 (12%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRA 99
++V A+GL E GL+ GD VA+ NS ++ GG+ N ++ +E
Sbjct: 53 REVEAFAKGLQEAGLKPGDRVALMLPNSPQFVIAFYGTLLAGGVGVNTNPMYTPRELHHQ 112
Query: 100 ITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-KRDMLTADIL--KG 156
+ LV + YLE++ +P + + + D++ +++L +L KG
Sbjct: 113 LRDAGARFLVILDQLLPRYLEVKGE-VPVEK---VVRTGIQDYLPFPKNLLYPLLLRRKG 168
Query: 157 YSLRSL----------PFTHSWAPEGAVIIC---FTSGTTGSPKGVVISHSALIVQSLAK 203
+ ++L P T P + +T GTTG KG +++H L +L
Sbjct: 169 EAPKALEGIPWRAFLRPGTPRPVPLDLDDLALLQYTGGTTGLAKGAMLTHRNLSANALQV 228
Query: 204 IA-IVGYGE-DDVYLHTAPLCHIGGLSSAMAM-LMVGACHVFIPKFESKSALEAVEQHCV 260
A I + E ++V L P H+ G++ AM + L+ GA V +P+ E K+ +EA+E+H V
Sbjct: 229 RAWIPDFREGEEVVLGAIPFFHVYGMTVAMNLALLGGAKLVLLPRPEIKAIVEAIEKHRV 288
Query: 261 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 320
T VP + ++K + SV+ ++G LP E+ E + AKL+ Y
Sbjct: 289 TLFPGVPTLYVAFNNFPGIEK--RDLKSVRACISGSAPLPLEVA-ERFMALTGAKLVEGY 345
Query: 321 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD- 379
G+TE S LY G+ + G+ VG P P V+ KV +
Sbjct: 346 GLTEASPVTHCNPLY-------GE--RRLGS-------------VGLPFPGVDAKVVDEE 383
Query: 380 ----GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 435
VG + +G +VM YW++ + + + WL TGD+ +D+ G ++V R+
Sbjct: 384 GRELPPGEVGELAVKGPNVMKGYWNR-PEETQKTLKDGWLFTGDLAKMDEDGYFYIVDRK 442
Query: 436 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 495
I +GG N+YP EVE VL QHP + VVG+ + E V A + L+ +Q ++
Sbjct: 443 KDMIIAGGYNIYPREVEEVLYQHPAVQEAAVVGVPDPYRGETVAAFLVLKPEYQNKVTDK 502
Query: 496 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMS 555
D + CR+ NL +K PR+ + +R+ P +S GKI + E+++EV +
Sbjct: 503 D--------------IETFCRQ-NLAAYKVPRI-IQFRESLPKSSVGKILKRELQKEVAA 546
>gi|423622057|ref|ZP_17597835.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus VD148]
gi|401262155|gb|EJR68299.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus VD148]
Length = 481
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 250/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ G VA+ N + I A++++G + LN R S
Sbjct: 29 TFMQLHEKVVSVCERLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + + S ++ A I
Sbjct: 89 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSFAEVMNGSKAE---------ASI 132
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ +SL E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 133 QEEFSL-----------EEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLCDDD 181
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 182 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 241
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 242 --LERLGEETYP--SSLRCMLLGGGPAPKSLLETCVEK--GIPVYQTYGMTETSSQICTL 295
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 296 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 334
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 335 VKGPNVTGGYFNREDATRETIQNG--WLYTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 392
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+A+ ESW Q + +S + +
Sbjct: 393 PAQIEEVLLSHPAVAEGGVVGMAD--------------ESWGQVPAAFVVKSGE-----V 433
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E + C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 434 TEEEILHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 478
>gi|229028669|ref|ZP_04184782.1| Acyl-CoA synthase [Bacillus cereus AH1271]
gi|228732632|gb|EEL83501.1| Acyl-CoA synthase [Bacillus cereus AH1271]
Length = 516
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 237/534 (44%), Gaps = 54/534 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 77 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAIIERDFPNSSFWYVEDDTPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI + + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNEASAEKVDI----EVDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++ L
Sbjct: 184 MTEHSMICTYFIKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPSDDAPAEPD 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAK-PSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A S+ G W +GD+G D G +++
Sbjct: 353 DVLP--PYEVGEIILRGPTMMAGYHNREEANVKSMYKG--WYHSGDLGYFDKDGYLFVAD 408
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPG++ + V+G + E VVA +
Sbjct: 409 RVDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVIV---------- 458
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ E L +C+ + L +K PR + L+ P ++GK+++
Sbjct: 459 -------KKDEAITEEELELYCKNSDELADYKRPRHY-LFVDELPRNASGKLQK 504
>gi|229029657|ref|ZP_04185733.1| Feruloyl-CoA synthetase [Bacillus cereus AH1271]
gi|228731661|gb|EEL82567.1| Feruloyl-CoA synthetase [Bacillus cereus AH1271]
Length = 496
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 143/543 (26%), Positives = 242/543 (44%), Gaps = 73/543 (13%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ + IT T +Q + V +A L+ ++ ++ G+ +AI + NS Y+ + A+A +
Sbjct: 17 DRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNSLEYIVLLFAIAKV 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
I PLN R + E + +L +E+ + L + +
Sbjct: 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEETFQNMALSMHKVS--------------- 121
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
+V + +++ LK R + + IIC+TSGTTG PKG V++ + +
Sbjct: 122 -YVQR--VISIKSLKEIEDRKIVNFEEINESASFIICYTSGTTGKPKGAVLTQENMFWNA 178
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHC 259
L + D + PL HIGG+ A L G + KFE +AL +E+H
Sbjct: 179 LNNTFAIDLTMHDSSIVLLPLFHIGGIGLFAFPTLFAGGVIIIPRKFEPTTALSMIEKHK 238
Query: 260 VTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI-S 318
VT ++ VP I L + + SV+ NGG P ELM+E + + L
Sbjct: 239 VTVVMGVPTIHQALINSPKFETA--NLQSVRWFYNGGAPCPEELMREFID---RGFLFGQ 293
Query: 319 AYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS 378
+GMTETS ++ ++ D + G++ GKP + +
Sbjct: 294 GFGMTETSPTVFMLSEEDAR--------RKIGSI-------------GKPVLFCDYVLID 332
Query: 379 D-----GSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ G VG +L RG +VM YW++ A K ++ G WL TGD+ +D+ G V++V
Sbjct: 333 ENKNKVGIGEVGELLIRGPNVMKEYWNRPDATKETIQDG--WLYTGDLAKVDEDGFVYIV 390
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
GR+ I SGGEN+YP EVE V+ + + + VVG + + E+ +A + + S + +E
Sbjct: 391 GRKKEMIISGGENIYPLEVEQVINKISEVYEVAVVGRQHVKWGEIPIAFIVKKSSSELTE 450
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRRE 552
EV+ C L +K P+ V + P +TGKI++ ++ +
Sbjct: 451 ---------------KEVIEHCCL--FLAKYKVPKEIVFLEE-LPKNATGKIQKVQLANQ 492
Query: 553 VMS 555
+ S
Sbjct: 493 LKS 495
>gi|228919712|ref|ZP_04083074.1| Acyl-CoA synthase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228840066|gb|EEM85345.1| Acyl-CoA synthase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 518
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 136
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 137 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 174
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 175 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 234
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ S+K + GG + L+K
Sbjct: 235 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVK 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 292 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 343
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 344 NEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 399
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 400 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 458
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 459 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 501
Query: 544 IRR 546
+++
Sbjct: 502 LQK 504
>gi|229017267|ref|ZP_04174172.1| Feruloyl-CoA synthetase [Bacillus cereus AH1273]
gi|229023440|ref|ZP_04179940.1| Feruloyl-CoA synthetase [Bacillus cereus AH1272]
gi|228737850|gb|EEL88346.1| Feruloyl-CoA synthetase [Bacillus cereus AH1272]
gi|228744020|gb|EEL94117.1| Feruloyl-CoA synthetase [Bacillus cereus AH1273]
Length = 496
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 247/553 (44%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ ++ ++ G+ +AI + NS Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNSLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ + L +Q+ + ++
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGATVLFVEETFQNMALLMQN--VTYVQR 125
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+S+ S LK R + + IIC+TSGTTG PKG V+
Sbjct: 126 VISIKS----------------LKEIEDRKIDNFEEINESASFIICYTSGTTGQPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTVHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIVPRKFEPTI 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E++ VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKYKVTVVMGVPTIHQALINCAKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
+ + + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCDYVLIDENKNKVEIGEVGELLIRGPNVMKGYWNRPDATEETIQDG--WLYTGDLAKV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V+G + + E+ +A +
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSEVCEVAVIGTQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L EV+ HCR L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSCSVLTEKEVI-DHCR-LFLAKYKVPKEIVFLEE-LPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLANQLKSR 496
>gi|452949082|gb|EME54553.1| AMP-binding domain protein [Amycolatopsis decaplanina DSM 44594]
Length = 552
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 179/390 (45%), Gaps = 47/390 (12%)
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 234
I +TSGTTG PKG +SH ++ + Y E D P H G+ +A
Sbjct: 191 IQYTSGTTGFPKGATLSHHNILNNGYFVGELCNYTEADKVCIPVPFYHCFGMVMGNLAAT 250
Query: 235 MVGACHVF-IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
GAC V P FE K+ LEAV TSL VP + +A L S++ +
Sbjct: 251 THGACMVIPAPAFEPKATLEAVAAEKCTSLYGVPTMF--IAELADPDFASHDLSSLRTGI 308
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+MK+ + A++ YGMTETS ++ T D ++E
Sbjct: 309 MAGSPCPVEVMKQVIDRMGMAEVSICYGMTETSP-VSTQTRADDSVER------------ 355
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PH+E+KV + G + TRG VML YW+Q
Sbjct: 356 -------RVSTVGRVGPHLEVKVVDPETGLTVPRGEPGELCTRGYSVMLGYWEQADKTAE 408
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
W+ TGD+ +D G V + GR + GGEN+YP E+E L HP I+ V+
Sbjct: 409 AIDAARWMHTGDLAIMDADGYVNITGRIKDMVIRGGENLYPREIEEFLYTHPDILDAQVI 468
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E ++A +R+RE L++E +R+ C E L +K PR
Sbjct: 469 GVPDEKYGEELMAWIRMREG---------------AAPLTAEAVREFC-EGKLARYKIPR 512
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+V + FP+T TGK+R+ E+R E +S L
Sbjct: 513 -YVHVVEEFPMTVTGKVRKVEMRAESISIL 541
>gi|456356570|dbj|BAM91015.1| putative long-chain-fatty-acid-CoA ligase [Agromonas oligotrophica
S58]
Length = 526
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 231/527 (43%), Gaps = 63/527 (11%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
+F + +A L +GL+ + +A NS+ Y E ++ ++AP+N+R + E
Sbjct: 38 EFDRKTDQVANALRALGLKPHERIAYFGKNSDSYFELLVGAMKANVVMAPVNWRLAGPEV 97
Query: 97 SRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS---SDFVNKRDMLTADI 153
+ + R L + +++ +PS+R ++ + D+ RD +AD
Sbjct: 98 AFIVEDCRAPALFVGPEFITMIRDIRDQ-LPSVRHIITTEGGAPEWQDYTAWRDAQSADD 156
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV-----QSLAKIAIVG 208
G ++ P+ + +TSGTTG PKG ++SH+ + K
Sbjct: 157 -PGVAI---------TPQDIALQLYTSGTTGKPKGAMLSHANFLNLVNTGNPDEKPDWNK 206
Query: 209 YGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA 268
+ DDV L P+ HIGG + L GA V +F+ L+ EQ +T L VPA
Sbjct: 207 WSTDDVSLIAMPIFHIGGSGWGLMSLYHGARGVVAREFDPTKILDFFEQSGITKLFMVPA 266
Query: 269 IMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSS 328
M + R ++ R +K +L G +P+ L+KE + F K + YGMTET+ +
Sbjct: 267 AMQFVVRQPRARQVDFSR--LKYMLYGASPIPAALLKECIDVF-KCGFVQMYGMTETTGT 323
Query: 329 LTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----H 383
+ + D +E ++ A GKP P +E+ + DG
Sbjct: 324 IIALPPED-HIEGLERMRSA-----------------GKPLPGIEVAIIDVDGRPLPPRQ 365
Query: 384 VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 443
VG I TR M YW+ A + WL TGD G +D+ G V++ R I SGG
Sbjct: 366 VGEIATRSGSNMTGYWNLPEATARTLGKDGWLRTGDAGYMDEDGYVYIHDRIKDMIISGG 425
Query: 444 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 503
EN+YP EVE+ L HP + V+GI + + E V A V ++ + +E++ ++ +
Sbjct: 426 ENIYPAEVESALCDHPDVAEAAVIGIPDDKWGEAVKAIVVMKPGKRATETDIINFTRTR- 484
Query: 504 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ GFK P+ V + P +GKI R +R
Sbjct: 485 ----------------IAGFKTPKS-VDFLDALPRNPSGKILRRNLR 514
>gi|255318758|ref|ZP_05359984.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|421855790|ref|ZP_16288165.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255304014|gb|EET83205.1| acyl-CoA synthetase family member 2 [Acinetobacter radioresistens
SK82]
gi|403188799|dbj|GAB74366.1| putative long-chain-fatty-acid--CoA ligase [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 561
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 150/570 (26%), Positives = 252/570 (44%), Gaps = 82/570 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EWYLEWILAVAF 79
+++VV++ NR + + V A LLE+GL+ GD +AI A N EW + A A
Sbjct: 36 QDAVVSVHQNRRISYAELRTLVDAFACNLLELGLKKGDRLAIWAPNCVEWTIAQ-FATAK 94
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLV-----------------TDESSDSWYLELQ 122
G I+ LN + E + + V L+ E ++ EL
Sbjct: 95 AGIILVNLNPSYRSHELEYVLNKVSCVGLIMAVQCKTSNFKEILLKIVPELHETQSRELS 154
Query: 123 HTAIPSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLP-FTHSWAPEGAVIICFTS 180
+P L+ + + + F D+LT+ + L++L + + I FTS
Sbjct: 155 LQRLPHLKHLIKIDDQAHPAFHCFDDLLTSPTSE--QLQALQNIGQELQFDETINIQFTS 212
Query: 181 GTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAML------ 234
GTTG+PKG +++H+ ++ + D + PL H G+ M L
Sbjct: 213 GTTGNPKGTMLTHNNILNNGYFVGERILLTPQDRVCISVPLFHCFGM--VMGNLACVTHG 270
Query: 235 --MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKI 292
MV C VF P S+L+A+EQ T+ VP + +A L + S++
Sbjct: 271 SAMVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFNEFDLSSLRTG 324
Query: 293 LNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNV 352
+ G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 325 IMAGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET----------- 372
Query: 353 TPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPS 407
+ VG+ PHVE+K+ V G++ TRG VML YW+
Sbjct: 373 --------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLGYWEDEEKTKE 424
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
V W+ TGD+ +D G + + GR + GGEN++P+E+E L HP + + VV
Sbjct: 425 VIDQTGWMHTGDLAEMDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSDVQVV 484
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E + AC+ L SE E++RQ+C+E +++ K PR
Sbjct: 485 GVPDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE-HISHQKVPR 527
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
++ + FPLT++GK ++ ++R + L
Sbjct: 528 -YIRFVTAFPLTASGKAQKYKIREMMQQEL 556
>gi|383453606|ref|YP_005367595.1| AMP-binding protein [Corallococcus coralloides DSM 2259]
gi|380735082|gb|AFE11084.1| AMP-binding domain protein [Corallococcus coralloides DSM 2259]
Length = 547
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 239/554 (43%), Gaps = 69/554 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
R ++V + N T +QF +A+GLL +G++ GD V + + N EW + A+
Sbjct: 35 REALVVASQNYRVTWRQFWDATTAVAKGLLALGIQKGDRVGLWSPNR---FEWTVSQYAL 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIP---SLRWHV 133
A G I+ LN + E A+ V+L+ + Y ++ P LR +
Sbjct: 92 ARTGAILVNLNPAYRTSELEYALNQAGVSVLLLAKGFRQTDYTQMLAEVRPRCAGLREAL 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
L S + + D+L+ L SL F + + I +TSGTTG PKG +SH
Sbjct: 152 VLDSDWDRLMKGGAKIGDDVLEAREL-SLQF------DDPINIQYTSGTTGFPKGATLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSA 251
++ ++ YG +D P H G+ + IP F+ +
Sbjct: 205 HNVLNNGFFVGEVLRYGPEDRVCIPVPFYHCFGMVMGNLACTSHGSAMVIPGEAFDPLAV 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L+ V+ TSL VP + +A L + +++ + G P E+MK+ +
Sbjct: 265 LQTVQAERCTSLYGVPTMF--IAELDHPRFGEFDLRTLRTGIMAGSPCPVEVMKQVQSRM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS T L D TLE + VG+ PH
Sbjct: 323 HMGEVTICYGMTETSPVSTQNPL-DDTLEK-------------------RVATVGRVHPH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+KV S V G + TRG VML YW+ A + W+ TGD+ ++D
Sbjct: 363 LEVKVVDPDSGAVVPLGQPGELCTRGYSVMLGYWENAEATAAAIDRAGWMHTGDLATMDG 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G V +VGR I GGENVYP EVE L HP I V+G+ + + E V+A VRL+
Sbjct: 423 EGYVKIVGRIKDMIIRGGENVYPREVEEFLHTHPEISEAQVIGVPSVKYGEEVMAWVRLK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
L+ E L C + ++ FK PR W+ FP+T TGK
Sbjct: 483 SGAS----------------LTPETLTAFCTGR-ISTFKIPR---HWKFVDSFPMTVTGK 522
Query: 544 IRRDEVRREVMSHL 557
+++ +R ++ L
Sbjct: 523 VQKFRMREVSIAEL 536
>gi|374574256|ref|ZP_09647352.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374422577|gb|EHR02110.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 525
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 244/564 (43%), Gaps = 65/564 (11%)
Query: 1 MANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIV 60
M A++ + A + +++ R + F +A L+ +G+ G+ +
Sbjct: 1 MTTQPLANLADMVRERATSRGDAIAFEFEGRATSFADFDVKTNKVANALIAMGVNKGERI 60
Query: 61 AISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYL 119
A NS+ Y E ++ G ++AP+N+R + E + ++ + PV+ V E +
Sbjct: 61 AYLGKNSDVYFELLMGAMKAGVVMAPVNWRLAGPEVAFIVSDCKAPVLFVGAEFITP--I 118
Query: 120 ELQHTAIPSLRWHVSLGSSSS---DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVII 176
+P +R ++ + DF RD + K +P A I
Sbjct: 119 RQIKDQLPGVRSVITTEGGAPEWPDFAAWRDAQSGHDPK------VPI----ATRDIAIQ 168
Query: 177 CFTSGTTGSPKGVVISHSALI--VQS---LAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM 231
+TSGTTG PKG ++SH+ + VQ+ K + DDV L P+ HIGG +
Sbjct: 169 LYTSGTTGKPKGAMLSHANFLNLVQTGNAEDKPEWNRWSTDDVSLVAMPIFHIGGSGWGV 228
Query: 232 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
L GA V +F+ L+ EQ +T L VPA M + R + R +K
Sbjct: 229 MGLYHGARGVIAREFDPTKVLDFFEQSSITKLFMVPAAMQFVVRQPRARTVDFSR--LKY 286
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+L G +P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 287 MLYGASPIPAALLKECIEIF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA--- 341
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 406
GK P VE+ + DG VG I TR M YW+ A
Sbjct: 342 --------------GKALPGVEIAILDVDGKPLPPREVGEIATRSGSNMAGYWNLPEATA 387
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ G+ WL TGD G +D+ G +++ R I SGGEN+YP EVE+ L HP + V
Sbjct: 388 ATLRGDGWLRTGDAGYMDEDGYLYIHDRIKDMIISGGENIYPAEVESALCDHPDVAEAAV 447
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
+GI + + E V A V ++ Q + ++ + RE+ + GFK P
Sbjct: 448 IGIPDDKWGEAVKAVVVMKPGKQATATD----------------IINFTRER-IAGFKTP 490
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVR 550
+ V + P +GKI R ++R
Sbjct: 491 KS-VEFLPALPRNPSGKILRRQLR 513
>gi|344996579|ref|YP_004798922.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964798|gb|AEM73945.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 553
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 237/544 (43%), Gaps = 68/544 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T QF + V + A+G + IG++ G+ VA+ A N YL I A+A IG ++ +N +
Sbjct: 35 TYSQFKKMVDDAAKGFMAIGIQKGEHVAVWATNRLEYLISIFALAKIGAVLVTVNTNYKI 94
Query: 94 KEASRAI-TSIRPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E + S ++ T+ DS YLE L++ +P L+ + +G
Sbjct: 95 YELEYLLRQSDSSTLIFTEGFKDSNYLEIVKKLNPRLQACKKGELENPNLPYLKRLIFIG 154
Query: 137 SSSSDFV-NKRDMLTADILKGYSLRSLPFTH-SWAPEGAVIICFTSGTTGSPKGVVISHS 194
D + N +++ ++ K S L + S P+ + + +TSGTTG PKGV+++H
Sbjct: 155 QGCHDGIYNWHEVI--ELGKNVSDEELIYRQKSLEPDEVINMQYTSGTTGFPKGVMLTHK 212
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALE 253
++ + A + D P H GL + A + GA V + F +E
Sbjct: 213 NILNNANAIADCMKLTHKDKLCIPVPFFHCFGLVLGIGACVTKGATMVPLDHFNPLKVME 272
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
V T L VP + +A L + S++ + G P ++M+E
Sbjct: 273 TVHFEKCTGLHGVPTMF--IAILQHPEFDKFDFSSLRTGIMAGAPCPIKVMREVVEKMNM 330
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ AYG TE S +T + DP + + VGKP VE
Sbjct: 331 KEITIAYGQTEASPVITQTRVDDPL--------------------EFRVSTVGKPLEGVE 370
Query: 374 LKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + VG I RG +VM Y+ A + WL TGD+G ID G
Sbjct: 371 VKIVDIHTKKEVPNGVVGEICARGYNVMKGYYKMPEATKQAIDEDGWLHTGDLGYIDQNG 430
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ + GR I GGEN+YP E+E L HP + + VVG+ + E + A + L++
Sbjct: 431 YLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKDG 490
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ +E KE + + NL+ K P+ +V++ FP T+ GK+++
Sbjct: 491 YTATEDEI------KEFVRT-----------NLSRHKTPK-YVVFVNEFPTTANGKVQKY 532
Query: 548 EVRR 551
++R
Sbjct: 533 KLRE 536
>gi|421466015|ref|ZP_15914701.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
gi|400203526|gb|EJO34512.1| AMP-binding enzyme [Acinetobacter radioresistens WC-A-157]
Length = 561
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 153/580 (26%), Positives = 257/580 (44%), Gaps = 84/580 (14%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EW 69
Q ++ AA +++VV++ NR + + V A LLE+GL+ GD +AI A N EW
Sbjct: 28 QACAQYAA--QDAVVSVHQNRRISYAELRTLVDAFACNLLELGLKKGDRLAIWAPNCVEW 85
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV-----------------TDE 112
+ A A G I+ LN + E + + V L+ E
Sbjct: 86 TIAQ-FATAKAGIILVNLNPSYRSHELEYVLNKVSCVGLIMAVQCKTSNFKEILLKIVPE 144
Query: 113 SSDSWYLELQHTAIPSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLP-FTHSWAP 170
++ EL +P L+ + + + F D+LT+ + L++L
Sbjct: 145 LHETQSRELSLQRLPHLKHLIKIDDQAHPAFHCFDDLLTSPTSE--QLQALQNIGQELQF 202
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 230
+ + I FTSGTTG+PKG +++H+ ++ + D + PL H G+
Sbjct: 203 DETINIQFTSGTTGNPKGTMLTHNNILNNGYFVGERILLTPQDRVCISVPLFHCFGM--V 260
Query: 231 MAML--------MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
M L MV C VF P S+L+A+EQ T+ VP + +A L +
Sbjct: 261 MGNLACVTHGSAMVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFN 314
Query: 283 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 342
S++ + G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 315 EFDLSSLRTGIMAGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET- 372
Query: 343 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLR 397
+ VG+ PHVE+K+ V G++ TRG VML
Sbjct: 373 ------------------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLG 414
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
YW+ V W+ TGD+ +D G + + GR + GGEN++P+E+E L
Sbjct: 415 YWEDEEKTKEVIDQTGWMHTGDLAEMDQQGFIQIKGRIKDVVIRGGENLFPKEIEDFLYT 474
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
HP + + VVG+ + + E + AC+ L SE E++RQ+C+E
Sbjct: 475 HPDVSDVQVVGVPDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE 518
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+++ K PR ++ + FPLT++GK ++ ++R + L
Sbjct: 519 -HISHQKVPR-YIRFVTAFPLTASGKAQKYKIREMMQQEL 556
>gi|56478075|ref|YP_159664.1| AMP-binding protein [Aromatoleum aromaticum EbN1]
gi|56314118|emb|CAI08763.1| putative long chain fatty-acid CoA ligase [Aromatoleum aromaticum
EbN1]
Length = 562
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 153/569 (26%), Positives = 249/569 (43%), Gaps = 78/569 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R ++V N T + V LA L+ +GL GD V I + N+ LEWIL A
Sbjct: 33 QREALVVCHQNVRLTYAELRLKVDALACALVRLGLAPGDRVGIWSQNN---LEWILTQFA 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSI--RPVML---------------VTDESSDSWYL 119
A G ++ +N + E A+ + R ++L + E +D
Sbjct: 90 TAKAGLVLVNINPAYRRSELEYAVNKVGCRALVLSPSFKGSDYLAMLSDLAPELADCEPG 149
Query: 120 ELQHTAIPSLRWHVSLGSS-SSDFVNKRDML---TADILKGYSLRSLPFTHSWAPEGAVI 175
L+ +PSL W + +G+ S+ +N D+L + D L ++R + +
Sbjct: 150 ALEAARMPSLNWVIRMGAEKSAGMLNFDDLLAPPSRDELVELAIRGEKLQF----DDPIN 205
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 234
I FTSGTTG PKG +SH ++ + E D PL H G+ + +
Sbjct: 206 IQFTSGTTGQPKGATLSHHNILNNGFFVGEAIRLVEGDRVCIPVPLYHCFGMVMGNLGCV 265
Query: 235 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
GA V+ + FE + LE + + T+ VP + + R R ++ +
Sbjct: 266 THGATMVYPAEAFEPVAVLETLAEERCTAAYGVPTMFIAMLDHPRFGDFDLSR--LRTGI 323
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+MK + ++ AYGMTETS P +F + T
Sbjct: 324 MAGSPCPIEVMKRVIDRMNMREVTIAYGMTETS-------------------PVSFQSGT 364
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSV 408
+ V + + VG+ PH+E+K+ + V G + TRG VML YW+
Sbjct: 365 GDPVER-RVSTVGRVQPHLEVKIVDNDGRIVPRGVAGELCTRGYSVMLGYWNDVDRTRDA 423
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
W+ TGD+ +IDD G +VGR + GGEN+YP E+E L +HP I+ + VVG
Sbjct: 424 IDAAGWMHTGDLATIDDEGYCNIVGRIKDMVIRGGENLYPREIEEFLYRHPKILDVQVVG 483
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + + E + A + +RE LS++ +R C + + K PR
Sbjct: 484 VPDQKYGEELCAWIIVREGEA----------------LSADEVRAFC-QGQIAHHKVPR- 525
Query: 529 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
++ + FP+T TGKI++ ++R ++ L
Sbjct: 526 YIKFVDSFPMTVTGKIQKFQIREQMKREL 554
>gi|228951366|ref|ZP_04113475.1| Acyl-CoA synthase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229068543|ref|ZP_04201844.1| Acyl-CoA synthase [Bacillus cereus F65185]
gi|228714685|gb|EEL66559.1| Acyl-CoA synthase [Bacillus cereus F65185]
gi|228808303|gb|EEM54813.1| Acyl-CoA synthase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 516
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 136
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 137 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 174
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 175 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 234
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ S+K + GG + L+K
Sbjct: 235 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVK 291
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 292 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 343
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 344 NEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 399
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 400 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 458
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 459 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 501
Query: 544 IRR 546
+++
Sbjct: 502 LQK 504
>gi|453075501|ref|ZP_21978287.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
gi|452762927|gb|EME21214.1| AMP-binding domain protein [Rhodococcus triatomae BKS 15-14]
Length = 561
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 155/550 (28%), Positives = 241/550 (43%), Gaps = 66/550 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVA 78
R+++V R T + +V LA G L GL GD V I A N +EW + A A
Sbjct: 51 DRDALVEHATGRRWTYTELAVEVDELAAGFLAHGLGKGDRVGIWAPNCAEWTMVQ-YATA 109
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAI----PSLRWHVS 134
IG I+ +N + E + LV+ + + T + P+L +
Sbjct: 110 KIGAILVNINPAYRSHELQYVLEQAGIRTLVSAAAFKTSDYAAMITEVRPNCPALESVIL 169
Query: 135 LGSS--SSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
LG ++ + L AD S ++ S + + + I +TSGTTG PKG +S
Sbjct: 170 LGGDDWNALLADGARALAADEGAVSSAQA-----SLSADDPINIQYTSGTTGFPKGATLS 224
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKS 250
H ++ + Y E D P H G+ +A GA V P F+ K+
Sbjct: 225 HHNILNNGYFVGELCHYTEADRVCIPVPFYHCFGMVMGNLACTSHGAAMVIPAPAFDPKA 284
Query: 251 ALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEA 307
L+AV+ TSL VP + +A+LA + ++ D S++ + G P E+MK+
Sbjct: 285 TLDAVQAERCTSLYGVPTMFIAELA-----EPDFENYDLSSLRTGIMAGSPCPVEVMKQV 339
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
+++ YGMTETS ++ T D T++ + VG+
Sbjct: 340 IERMGMSEVSICYGMTETSP-VSLQTRSDDTIDQ-------------------RVSTVGR 379
Query: 368 PAPHVELKVCSDGSS------HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
PH+E+K+ + G + TRG VML YW+ W+ TGDIG
Sbjct: 380 VGPHLEVKIVDPATGLTVPRGAAGELCTRGYSVMLGYWNNPEKTAEAIDAARWMHTGDIG 439
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+D G V + GR + GGEN+YP E+E L HP I+ V+G+ + + E ++A
Sbjct: 440 VMDADGYVAITGRIKDMVIRGGENIYPREIEEFLYTHPDILDAQVIGVPDEKYGEELMAW 499
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
VR+RE L ++ +R+ C K L +K PR +V FP+T T
Sbjct: 500 VRMREG---------------AARLDADAVREFCTGK-LARYKIPR-YVHVVDEFPMTVT 542
Query: 542 GKIRRDEVRR 551
GK+R+ E+R
Sbjct: 543 GKVRKVEMRE 552
>gi|423474294|ref|ZP_17451033.1| hypothetical protein IEM_05595 [Bacillus cereus BAG6O-2]
gi|402423058|gb|EJV55277.1| hypothetical protein IEM_05595 [Bacillus cereus BAG6O-2]
Length = 518
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 243/536 (45%), Gaps = 58/536 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAMIERDFPNSSFWYVEDDAPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDYCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ +T+ P + L ++K D S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWNML-----LQKDLAEYDLTSMKIGVYGGAAMAPALVKECKERL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAE 352
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 353 PEDMLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFV 408
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
R + + SGG N+YP EVE L HPG++ + V+G + E VVA V +++ S
Sbjct: 409 ADRVDDMVISGGVNIYPREVEDFLHSHPGVLDVAVLGEPDELWGERVVAVV-VKKDENIS 467
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
E++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 468 EAD----------------LEMYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|423434472|ref|ZP_17411453.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG4X12-1]
gi|401126403|gb|EJQ34143.1| O-succinylbenzoate-CoA ligase [Bacillus cereus BAG4X12-1]
Length = 518
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 242/545 (44%), Gaps = 76/545 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTIAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSEL 303
F++++ L +++ +T+ P + L ++K D S+K + GG + L
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWNML-----LQKDLAQYDLTSMKIGIYGGAAMAPAL 291
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGV 363
+KE L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 292 VKECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIV 343
Query: 364 CVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGS 422
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G
Sbjct: 344 KPNEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGY 399
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
D G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 400 FDKDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVI 459
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTST 541
K+ ++ L +C+E + L +K PR + L+ P ++
Sbjct: 460 V-----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNAS 501
Query: 542 GKIRR 546
GK+++
Sbjct: 502 GKLQK 506
>gi|392543499|ref|ZP_10290636.1| AMP-binding domain protein [Pseudoalteromonas piscicida JCM 20779]
Length = 569
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 238/564 (42%), Gaps = 68/564 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAI-SALNSEWYLEWILAVA 78
+R+++V + ++++ + LA LL +G++ GD V I S N EW L A A
Sbjct: 44 ERDAIVVSHQSVRLNYREYLAKINQLAASLLAVGIQPGDRVGIWSPNNLEWSLVQ-FATA 102
Query: 79 FIGGIVAPLNYRWSFKEASRAITSIRPVMLV-----------------TDESSDSWYLEL 121
IG I+ +N + E + ++ MLV ES D + EL
Sbjct: 103 KIGAIMVCINPAYRPSELEYVLNNVECKMLVMAKSFKHSHYVDMIRELAPESYDCMFGEL 162
Query: 122 QHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+PSL+ V + + L + + L + + + A+ I FTSG
Sbjct: 163 SSQRLPSLKQIVLIDEDIEPGLMNFSTLLSKANDAHYLEANAIAANLSACDAINIQFTSG 222
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACH 240
TTG+PKG ++HS ++ L + E D PL H G+ + + GAC
Sbjct: 223 TTGNPKGATLTHSNILNNGLLVANAMKLTEQDKLCIPVPLYHCFGMVLGNLVCISKGACA 282
Query: 241 VFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
VF F+ LE VE+ T L VP + +A L T S++ + G
Sbjct: 283 VFPNDSFDPLITLEVVEREKCTGLHGVPTMF--IAQLEHSDFTQFDLSSLRTGVMAGSTC 340
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
P ++M++ ++ YG TE S + +T D +E Q
Sbjct: 341 PEKVMRQVQTQMHMTDVLIGYGQTE-CSPINNITEIDSPVEKRVQ--------------- 384
Query: 360 PQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
VG+ PH E+K+ D H+ G + RG VM YW + +
Sbjct: 385 ----TVGRAMPHTEVKII-DELGHIAPIGTPGEVCARGYCVMKGYWQDPEKTAATIDDDG 439
Query: 414 WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANAR 473
WL +GD+G +DD G V +VGR I GGEN+YP E+E VL H I V GI + +
Sbjct: 440 WLHSGDLGVMDDEGFVSIVGRIKDMIIRGGENIYPREIEEVLYHHDDIQDAAVFGIKDEK 499
Query: 474 LTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR 533
E V V+L+ SE E +R ++K L FK P+ ++
Sbjct: 500 YGEEVCVWVQLKPGHYISE----------------EDIRVFLKDK-LAYFKVPK-YIKLV 541
Query: 534 KPFPLTSTGKIRRDEVRREVMSHL 557
+P+T TGK+++ ++R ++ L
Sbjct: 542 DAYPMTVTGKLQKFKMRDQMEQEL 565
>gi|325964235|ref|YP_004242141.1| acyl-CoA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323470322|gb|ADX74007.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Arthrobacter
phenanthrenivorans Sphe3]
Length = 558
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 153/547 (27%), Positives = 238/547 (43%), Gaps = 75/547 (13%)
Query: 40 QDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASR 98
DV LAR L+ +G+ GD V I + N +EW L A A G I+ +N + E
Sbjct: 56 DDVDRLARALIAVGVAKGDRVGIWSPNCAEWTL-LQYATAKAGAILVNVNPAYRRHELQF 114
Query: 99 AITSIRPVMLVT---DESSDSWYLELQHTAI---PSLRWHVSLGSSSSDFVN------KR 146
+ +LVT D +SD Y+ + A+ P LR V L + + + +
Sbjct: 115 VVKQNGMRLLVTAPSDRTSD--YVGMAREALAGCPDLRGLVFLPAPAEEGFDAGVPLSDA 172
Query: 147 DMLTADILKGYSLRSLPFTHS--------WAPEGAVIICFTSGTTGSPKGVVISHSALIV 198
++ A++L+ R+ HS +P + + +TSGTTG PKG ++H ++
Sbjct: 173 ELTYAELLR----RADAVGHSSLKARMAELSPHDPINLQYTSGTTGFPKGATLTHRNILN 228
Query: 199 QSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEAVE 256
+ ++ Y E D + P H G+ + IP F +ALEAV+
Sbjct: 229 NGFSIGELLRYTEHDRVVIPVPFYHCFGMVIGNLNALSHGAATIIPGRGFNPAAALEAVQ 288
Query: 257 QHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
TSL VP + +A L +++ + G P E+M + +
Sbjct: 289 DFGGTSLYGVPTMF--IAELALPDFASYDLSTLRTGVMAGSPCPVEVMNRVISEMNMKDV 346
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
YGMTETS T MT + TL + VG+ PH+E KV
Sbjct: 347 AICYGMTETSPVST-MTRHGDTLRQRTE-------------------TVGRAMPHLESKV 386
Query: 377 CSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
S V G + TRG VM YW+Q + W+ TGD+ +D G V
Sbjct: 387 VDPASGEVLERGQIGELCTRGYAVMAGYWNQPDKTIEAIDPDGWMHTGDLARMDGDGYVV 446
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ GR + GGEN+YP E+E L HP + + V+G+ +A E ++AC+ L+ +
Sbjct: 447 IEGRIKDMVIRGGENIYPREIEEFLYTHPSVQDVQVIGVPDATYGEELMACIILKPGAE- 505
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
DQ++ + CR K L +K PR +V R FP+T +GKIR+ E+R
Sbjct: 506 ---PLDQAA-----------VAGFCRGK-LAHYKIPR-YVEVRDSFPMTVSGKIRKVEMR 549
Query: 551 REVMSHL 557
+ ++ L
Sbjct: 550 EQAVARL 556
>gi|262378975|ref|ZP_06072132.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
gi|262300260|gb|EEY88172.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
Length = 561
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 153/580 (26%), Positives = 257/580 (44%), Gaps = 84/580 (14%)
Query: 11 QCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS-EW 69
Q ++ AA +++VV++ NR + + V A LLE+GL+ GD +AI A N EW
Sbjct: 28 QACAQYAA--QDAVVSVHQNRRISYAELRTLVDAFACNLLELGLKKGDRLAIWAPNCVEW 85
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLV-----------------TDE 112
+ A A G I+ LN + E + + V L+ E
Sbjct: 86 TIAQ-FATAKAGIILVNLNPSYRSHELEYVLNKVSCVGLIMAVQCKTSNFKEILLKIVPE 144
Query: 113 SSDSWYLELQHTAIPSLRWHVSLGSSSSD-FVNKRDMLTADILKGYSLRSLP-FTHSWAP 170
++ EL +P L+ + + + F D+LT+ + L++L
Sbjct: 145 LHETQSRELSLQRLPHLKHLIKIDDQAHPAFHCFDDLLTSPTSE--QLQALQNIGQELQF 202
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 230
+ + I FTSGTTG+PKG +++H+ ++ + D + PL H G+
Sbjct: 203 DETINIQFTSGTTGNPKGTMLTHNNILNNGYFVGERILLTPQDRVCISVPLFHCFGM--V 260
Query: 231 MAML--------MVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKT 282
M L MV C VF P S+L+A+EQ T+ VP + +A L +
Sbjct: 261 MGNLACVTHGSAMVYPCDVFNPL----SSLKAIEQEKCTAAYGVPTMF--IAMLEHEQFN 314
Query: 283 WKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETP 342
S++ + G P E+M+ + +++ YGMTETS ++ ++ D +ET
Sbjct: 315 EFDLSSLRTGIMAGSPCPREIMQRVIDRMHMSQVTICYGMTETSP-VSAQSMVDDPIET- 372
Query: 343 GQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLR 397
+ VG+ PHVE+K+ V G++ TRG VML
Sbjct: 373 ------------------RVNTVGRIHPHVEIKIIDRNGKIVPRGKLGQLCTRGYSVMLG 414
Query: 398 YWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQ 457
YW+ V W+ TGD+ +D G + + GR + GGEN++P+E+E L
Sbjct: 415 YWEDEEKTKEVIDQTGWMHTGDLAEMDQEGFIQIKGRIKDVVIRGGENLFPKEIEDFLYT 474
Query: 458 HPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCRE 517
HP + + VVG+ + + E + AC+ L SE E++RQ+C+E
Sbjct: 475 HPDVSDVQVVGVPDQKYGEELCACIILHPHSNTSE----------------EIIRQYCKE 518
Query: 518 KNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+++ K PR ++ + FPLT++GK ++ ++R + L
Sbjct: 519 -HISHQKVPR-YIRFVTAFPLTASGKAQKYKIREMMQQEL 556
>gi|399910718|ref|ZP_10779032.1| AMP-binding domain protein [Halomonas sp. KM-1]
Length = 567
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 153/553 (27%), Positives = 250/553 (45%), Gaps = 72/553 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++ Q V AR +L +G++ GD V I + N +EW + A A IG I+ +N +
Sbjct: 55 TWKELQQAVNQAARAMLALGVKKGDRVGIWSPNCAEWTITQ-FATAKIGAILVNINPSYR 113
Query: 93 FKEASRAIT-SIRPVMLVTDESSDSWYL--------ELQHTA--------IPSLRWHVSL 135
E A+ S +++ + S Y+ EL+ A +P L+ V L
Sbjct: 114 THELEYALKQSGASTLILQGKFKTSDYVATLAELAPELREGAPSTFSAAKLPELKRVVCL 173
Query: 136 GSSS--SDFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+ + + + ML AD + L + T + + + I +TSGTTG+PKG +S
Sbjct: 174 DADRALTGMFSWQSMLAHADEVSDEHLAEIQATLQF--DEPINIQYTSGTTGAPKGATLS 231
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPK-FESKS 250
H ++ +G+ E D + PL H G + + + GA ++ F+ ++
Sbjct: 232 HHNILNNGFFVARTMGFSEKDRLVIPVPLYHCFGMVMGNLGCVTHGATMIYPGDGFDPEA 291
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
L+AV T+L VP + +A L +++ + G P E+M++ +
Sbjct: 292 TLKAVSDEKATALYGVPTMF--IAELEHPNFAQYDLSTLRTGIMAGSICPIEVMRKVIDK 349
Query: 311 FPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAP 370
+ YGMTETS T T D LE VT VG P
Sbjct: 350 MHMEDVTICYGMTETSPVST-QTKTDAPLEK---------RVT----------TVGTIHP 389
Query: 371 HVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
H+E+K+ S + V G + TRG VML YW+ A W+ TGD+ ++D
Sbjct: 390 HLEVKLVSPETGAVVPRGETGELCTRGYSVMLGYWNNEEATAKSIDSAGWMHTGDLATMD 449
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
+ G + +VGR I GGEN+YP E+E L HP I + V+G+ + + E V+A V+L
Sbjct: 450 EEGYIAIVGRIKDMIIRGGENIYPREIEDFLYTHPAISDVQVIGVPDEKYGEEVMAWVKL 509
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
E + L+++ L++ C+ K + +K PR +V + FP+T TGKI
Sbjct: 510 GEGQK----------------LNADELKEFCKGK-IAHYKIPR-YVKFVDEFPMTVTGKI 551
Query: 545 RRDEVRREVMSHL 557
++ ++R E L
Sbjct: 552 QKFKMREEATHEL 564
>gi|119899356|ref|YP_934569.1| AMP-binding protein [Azoarcus sp. BH72]
gi|119671769|emb|CAL95683.1| Long-chain fatty-acid-CoA ligase [Azoarcus sp. BH72]
Length = 562
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 152/574 (26%), Positives = 250/574 (43%), Gaps = 88/574 (15%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---A 76
+R ++V N T + V LA GL+ +GL+ G+ + I + N +EW L A
Sbjct: 33 EREALVVRHQNVRLTYAELKHKVDALACGLMRLGLQPGERIGIWSQNR---MEWTLTQFA 89
Query: 77 VAFIGGIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLE--------------- 120
A G ++ +N + E A+ + ++++ S YLE
Sbjct: 90 SAKAGLVLVNINPAYRRSELEYALNKVGCRALILSPAFKSSDYLEMLADLAPELGHCEPG 149
Query: 121 -LQHTAIPSLRWHVSLGSSSS----DFVN-----KRDMLTADILKGYSLRSLPFTHSWAP 170
L+ +P+L + +G+ + +F + RD LTA L G L+
Sbjct: 150 LLRAHKLPTLEMVIRMGAEKTPGMLNFDDLLAPPTRDELTALALLGEKLQF--------- 200
Query: 171 EGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA 230
+ A+ I FTSGTTG+PKG +SH ++ + D PL H G+
Sbjct: 201 DEAINIQFTSGTTGNPKGATLSHHNILNNGFFVGEAIRLVAGDRVCIPVPLYHCFGMVMG 260
Query: 231 -MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDS 288
+ L GA V+ + FE ++ L+ + + T+ VP + +A L +
Sbjct: 261 NLGCLTHGATMVYPAEAFEPQAVLKTLAEERCTAAYGVPTMF--IAVLDHPDFAAADLSA 318
Query: 289 VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQA 348
++ + G P E+MK + ++ AYGMTETS ++F + D LE
Sbjct: 319 LRTGIMAGSPCPIEVMKRVVDKMHMKEVTIAYGMTETSP-VSFQSGTDDPLER------- 370
Query: 349 FGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFL 403
+ VG+ PH E+K+ + V G + TRG VML YWD
Sbjct: 371 ------------RVSTVGRIQPHCEVKIIDNDGRIVPRGMPGELCTRGYSVMLGYWDDEA 418
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
W+ TGD+ IDD G +VGR + GGEN+YP E+E L +HP I+
Sbjct: 419 KTREALDAAGWMHTGDLAVIDDEGYCNIVGRIKDMVIRGGENIYPREIEEFLYRHPQILD 478
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
+ VVG+ + + E + A + LRE + LS+ +R +C + + +
Sbjct: 479 VQVVGVPDQKYGEELCAWIILREGAE----------------LSANDVRAYC-QGQIAHY 521
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
K PR ++ + FP+T TGKI++ ++R ++ L
Sbjct: 522 KIPR-YIKFVDSFPMTVTGKIQKFQIREQMKREL 554
>gi|423525214|ref|ZP_17501687.1| hypothetical protein IGC_04597 [Bacillus cereus HuA4-10]
gi|401167896|gb|EJQ75165.1| hypothetical protein IGC_04597 [Bacillus cereus HuA4-10]
Length = 518
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 138/535 (25%), Positives = 242/535 (45%), Gaps = 56/535 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVTMIERDFPNSSFWYVEDDAPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDYCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ +T+ P + L ++K D S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWNML-----LQKDLAEYDLTSMKIGVYGGAAMAPALVKECKERL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAE 352
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ VG I+ RG +M Y ++ A + S + W +GD+G D G +++
Sbjct: 353 PDDMLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVA 409
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R + + SGG N+YP E+E L HPG++ + V+G + E VVA V
Sbjct: 410 DRVDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVVV--------- 460
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ +++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 --------KKDEMITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|423541915|ref|ZP_17518306.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus HuB4-10]
gi|401169735|gb|EJQ76979.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus HuB4-10]
Length = 481
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 250/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ G VA+ N + I A++++G + LN R S
Sbjct: 29 TFMQLHEKVVSVCERLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + + S ++ A I
Sbjct: 89 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSFAEVMNGSKAE---------ASI 132
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ +SL E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 133 QEEFSL-----------EEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDD 181
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 182 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 241
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 242 --LERLGEETYP--SSLRCMLLGGGPAPKPLLETCVEK--GIPVYQTYGMTETSSQICTL 295
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 296 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 334
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 335 VKGPNVTGGYFNREDATRETIQNG--WLYTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 392
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+A+ ESW Q + +S + +
Sbjct: 393 PAQIEEVLLSHPAVAEGGVVGMAD--------------ESWGQVPAAFVVKSGE-----V 433
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E + C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 434 TEEEILHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 478
>gi|229108478|ref|ZP_04238095.1| Acyl-CoA synthase [Bacillus cereus Rock1-15]
gi|228675105|gb|EEL30332.1| Acyl-CoA synthase [Bacillus cereus Rock1-15]
Length = 518
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 240/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNATSSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ S+K + GG + L+K
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVK 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 294 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 346 NEDAPAEPDDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 401
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 402 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 460
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 461 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 503
Query: 544 IRR 546
+++
Sbjct: 504 LQK 506
>gi|312794091|ref|YP_004027014.1| amp-dependent synthetase and ligase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181231|gb|ADQ41401.1| AMP-dependent synthetase and ligase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 553
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/544 (26%), Positives = 237/544 (43%), Gaps = 68/544 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T QF + V + A+G + IG++ G+ VA+ A N YL I A+A IG ++ +N +
Sbjct: 35 TYSQFKKMVDDAAKGFMAIGIQKGEHVAVWATNRLEYLISIFALAKIGAMLVTVNTNYKI 94
Query: 94 KEASRAI-TSIRPVMLVTDESSDSWYLE----------------LQHTAIPSLRWHVSLG 136
E + S ++ T+ DS YLE L++ +P L+ + +G
Sbjct: 95 YELEYLLRQSDSSTLIFTEGFKDSNYLEIVKKLNPRLQACKKGELENPNLPYLKRLIFIG 154
Query: 137 SSSSDFV-NKRDMLTADILKGYSLRSLPFTH-SWAPEGAVIICFTSGTTGSPKGVVISHS 194
D + N +++ ++ K S L + S P+ + + +TSGTTG PKGV+++H
Sbjct: 155 QGCHDGIYNWHEVI--ELGKNVSDEELIYRQKSLEPDEVINMQYTSGTTGFPKGVMLTHK 212
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALE 253
++ + A + D P H GL + A + GA V + F +E
Sbjct: 213 NILNNANAIADCMKLTHKDKLCIPVPFFHCFGLVLGISACVTKGATMVPLDHFNPLKVME 272
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
V T L VP + +A L + S++ + G P ++M+E
Sbjct: 273 TVHFEKCTGLHGVPTMF--IAILQHPEFDKFDFSSLRTGIMAGAPCPIKVMREVVEKMNM 330
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ AYG TE S +T + DP + + VGKP VE
Sbjct: 331 KEITIAYGQTEASPVITQTRVDDPL--------------------EFRVSTVGKPLEGVE 370
Query: 374 LKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + VG I RG +VM Y+ A + WL TGD+G ID G
Sbjct: 371 VKIVDIHTKKEVPNGVVGEICARGYNVMKGYYKMPEATKQAIDEDGWLHTGDLGYIDQNG 430
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ + GR I GGEN+YP E+E L HP + + VVG+ + E + A + L++
Sbjct: 431 YLRITGRLKDMIIRGGENIYPREIEEFLYTHPAVKDVQVVGVPDKVYGEEIAAFIILKDG 490
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ +E KE + + NL+ K P+ +V++ FP T+ GK+++
Sbjct: 491 YTATEDEI------KEFVRT-----------NLSRHKTPK-YVVFVNEFPTTANGKVQKY 532
Query: 548 EVRR 551
++R
Sbjct: 533 KLRE 536
>gi|146306755|ref|YP_001187220.1| AMP-dependent synthetase and ligase [Pseudomonas mendocina ymp]
gi|145574956|gb|ABP84488.1| AMP-dependent synthetase and ligase [Pseudomonas mendocina ymp]
Length = 515
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 249/558 (44%), Gaps = 70/558 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ + +SR A + + + T Q + LA GL ++GL+ +AI ALN
Sbjct: 2 NLGKIISRSARYWPDHEALVDSKQRITFAQLERRTNRLASGLFDLGLQPAAHIAILALNR 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
E +A + P+N R S E + + ++T E + L+ + P
Sbjct: 62 VELAEAEVAFYKAAMVKVPINARLSLDEIIQILNDSHSQAVIT-EGRFAAALQARRAETP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
LRW +SL + D + +L G S P A + ++ +TSG++G K
Sbjct: 121 RLRWIISLDDEAGDIAYRA------LLAGGS--EAPVHSDPADDALAVLHYTSGSSGVLK 172
Query: 188 GVVIS---HSALIVQSLA---KIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
++S ALI +S+A + A G DV H P+ H G+ M +L VGAC++
Sbjct: 173 AAMLSFGNRKALIRKSIASPTRRAAPG----DVMAHVGPITHASGMQ-IMPLLAVGACNL 227
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ +++ + LE +E+ VT L VPA++ L V++ S++ ++ G +
Sbjct: 228 LLERYDDRLLLETIERERVTRLFLVPAMINRLVNFPEVERF--DLSSLRLVMYGAAPMAP 285
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
L+K A F L YG ET S +T +T D +E G+ + +
Sbjct: 286 ALVKRAIEVFGPI-LAQGYGAGETCSLVTVLTEQDHLIED--------GDFS-------R 329
Query: 362 GVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ +L+V +D +G I+ +G +M YW P + T EV D
Sbjct: 330 LASCGRCYFETDLRVVNDNFEDVKPGEIGEIVVKGPDIMQGYWQ----APEL-TAEVMRD 384
Query: 417 ----TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
TGD+ ++D+ G V++V R+ I SGG N+YP EVE VL P + VVG+ +
Sbjct: 385 GYYLTGDLATVDERGYVFIVDRKKEMIISGGFNIYPTEVEQVLYSLPQVFEAAVVGVPDE 444
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A V L+ ES LS+E + +HC ++L FK PR V +
Sbjct: 445 QWGEAVRAVVVLKP----GES------------LSAEAIIEHC-GRSLASFKKPRA-VDF 486
Query: 533 RKPFPLTSTGKIRRDEVR 550
K P GK+ R +R
Sbjct: 487 AKELPKNPNGKVVRRLIR 504
>gi|52079556|ref|YP_078347.1| acyl-CoA synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319646655|ref|ZP_08000884.1| hypothetical protein HMPREF1012_01921 [Bacillus sp. BT1B_CT2]
gi|404488423|ref|YP_006712529.1| acyl-CoA synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52002767|gb|AAU22709.1| long-chain fatty-acid-CoA ligase [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52347422|gb|AAU40056.1| aceto-acyl-CoA ligase YngI [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391243|gb|EFV72041.1| hypothetical protein HMPREF1012_01921 [Bacillus sp. BT1B_CT2]
Length = 539
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 239/550 (43%), Gaps = 77/550 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWS 92
Q+ V++ +A+GLL +G++ G+ VAI A N EWIL A A IG ++ +N +
Sbjct: 38 QELVEETSKIAKGLLALGIQKGEHVAIWASNIP---EWILLQFATARIGAVLVTVNTSYQ 94
Query: 93 FKEASRAIT-SIRPVMLVTDESSDSWYLEL------QHTAIPSLRWHVSLGSSSSD---- 141
+E + S + + D + Y+ + +P L+ V LG + +
Sbjct: 95 ARELEYLLEHSDSTTLFLMDGYKGTSYINMIDEIMKNPEKLPKLKNLVYLGKNETPEHMT 154
Query: 142 -FVNKRDM----LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
F M AD+ + R TH + + + +TSGTTG PKGV+++H +
Sbjct: 155 AFAEIAKMGETVSDADLFE----REQSLTH----DDVINMQYTSGTTGFPKGVMLTHYNI 206
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
+ + +G +D PL H G + S +A + GA + I +F+ L+ V
Sbjct: 207 VNNAAIVADRMGLTSEDRLCIPVPLFHCFGCVLSTLACVASGAAMLPIIEFKPDIVLQTV 266
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
E+ T L VP + +A L S++ + G P E+MK+
Sbjct: 267 EKERCTGLQGVPTMF--IAELTHPDFANYDLSSLRTGIMAGSPCPREVMKKVMKQMNMTD 324
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ AYG TE+S +T T+ D T+E + VGK PHVE+K
Sbjct: 325 ITIAYGQTESSPVITQTTVTD-TIERRVE-------------------TVGKVHPHVEMK 364
Query: 376 VCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
+ G G + TRG VM Y+ A + WL TGD+ +D G V
Sbjct: 365 IVDPDTGETLGPDEQGELCTRGYLVMKGYYKMDEATKKAIDEDGWLHTGDLAEMDRDGYV 424
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+ GR I GGEN+YP E+E L +H I+ + VVG+ + + E A ++ R +
Sbjct: 425 RITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVVGVPDEKYGEKTAAFIKCRPGKK 484
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
L+ E +R C+ L+ +K P +V +PLT++GK+++ +
Sbjct: 485 ----------------LTLEDVRDFCK-GQLSYYKIPE-YVFLIDEYPLTASGKVQKYVL 526
Query: 550 RREVMSHLKS 559
R L S
Sbjct: 527 RDRAAELLAS 536
>gi|159463650|ref|XP_001690055.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284043|gb|EDP09793.1| predicted protein [Chlamydomonas reinhardtii]
Length = 444
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 152/302 (50%), Gaps = 54/302 (17%)
Query: 57 GDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS 116
G +V + A S +E +LA G I+ P+N+RWS E + A+ + P +++ D +
Sbjct: 27 GSVVVLVAQTSAVMMEAMLACLDAGCILCPVNWRWSVAELAEALQRLSPALVLHDVTCAG 86
Query: 117 WYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE-GAVI 175
L A+ A+ + L+ L AP G +
Sbjct: 87 ----LAQQAV------------------------AEAGRDLQLQLL------APACGTAL 112
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLM 235
+ FTSGTT +PKGV +SH+A QS+ K+A+VGY D YLHTAPL HIGGLSSA A LM
Sbjct: 113 LVFTSGTTAAPKGVQLSHAAFHAQSMVKLALVGYCPADTYLHTAPLFHIGGLSSAFAALM 172
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRV-----------KKTWK 284
G VF+P+F++++AL A+ H V+ I VP ++ DLA ++
Sbjct: 173 AGCVQVFMPRFDAEAALAAILHHRVSVFIAVPTMLQDLAAAAAATAAAVTGAAGPERLPA 232
Query: 285 GRDS--------VKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYD 336
G + V++IL G GG +L + +FP A L+SAYGMTE SS+TF L
Sbjct: 233 GAEDVAPGPLGCVRRILVGAGGTAPKLQDAVSRTFPAAHLLSAYGMTEACSSMTFRHLRG 292
Query: 337 PT 338
P
Sbjct: 293 PA 294
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 42/147 (28%)
Query: 404 AKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIG 463
+KP++ T + WL TGD+G + G +WL+GR IKSGGENV+ +VEAVL HP +
Sbjct: 326 SKPAL-TADGWLRTGDLGYLAADGGLWLLGRAKDMIKSGGENVFAPQVEAVLCAHPAVAA 384
Query: 464 IVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGF 523
VVG+ + RL E + L GF
Sbjct: 385 AAVVGLPHERLGE-----------------------------------------QGLAGF 403
Query: 524 KAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ PRL V +P PL +GK+ + +R
Sbjct: 404 RLPRLAVAQWQPLPLNGSGKVAKPVIR 430
>gi|206968497|ref|ZP_03229453.1| AMP-binding protein [Bacillus cereus AH1134]
gi|206737417|gb|EDZ54564.1| AMP-binding protein [Bacillus cereus AH1134]
Length = 518
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/543 (25%), Positives = 240/543 (44%), Gaps = 72/543 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD +++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEDGVRKGDTISVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDS--------------WYLELQHTAI 126
G I P+N+R KE S + ++V +++ +S W +E +
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
S +H + ++SS+ VN + D + S+ +TSGTTG P
Sbjct: 139 AS-SYHEKVNAASSEKVN----IEIDEMDYCSM-----------------LYTSGTTGHP 176
Query: 187 KGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPK 245
KGV+ H + S+ + Y D V L APL H G L++ + + VG +V +
Sbjct: 177 KGVLHRHREMTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHH 236
Query: 246 FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMK 305
F++++ L +++ +T+ P + L++ S+K + GG + L+K
Sbjct: 237 FDTETVLHTIQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVK 293
Query: 306 EATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCV 365
E L+ YGMTE + F+ D Q+ +A TP H+ + V
Sbjct: 294 ECKERL-YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKP 345
Query: 366 GKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSID 424
+ AP V VG I+ RG +M Y ++ A K S+ G W +GD+G D
Sbjct: 346 NEDAPAEPEDVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFD 401
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
G +++ R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 402 KDGYLFVADRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV- 460
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGK 543
K+ ++ L +C+E + L +K PR + L+ P ++GK
Sbjct: 461 ----------------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGK 503
Query: 544 IRR 546
+++
Sbjct: 504 LQK 506
>gi|423367241|ref|ZP_17344674.1| hypothetical protein IC3_02343 [Bacillus cereus VD142]
gi|401085617|gb|EJP93855.1| hypothetical protein IC3_02343 [Bacillus cereus VD142]
Length = 518
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 237/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAMIERDFPNSSFWYVEDDAPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + F + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDFCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTKYDLTSMKIGVYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + P
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDGPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DTLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPG++ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVV------------ 459
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ E L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 460 -----VKKDEAITEEDLEIYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|297189981|ref|ZP_06907379.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
gi|197718638|gb|EDY62546.1| feruloyl-CoA synthetase [Streptomyces pristinaespiralis ATCC 25486]
Length = 515
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 257/568 (45%), Gaps = 79/568 (13%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ Q L R + TI+G R T ++ + LA L +G GD VA+ ALNS
Sbjct: 2 YLTQSLHRAVQQNPERIATISGERVRTWRESGDRIARLAGALRALGAAEGDRVALLALNS 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
+ + +++ AV + G +V P+N RWS +E + ++ +L+ D++ + L +P
Sbjct: 62 DVHHDYLYAVWWAGCVVNPVNTRWSVREIAYSLEESDTRILLVDDA----FAPL----VP 113
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVI------ICFTSG 181
LR L + ++ D T + + Y L H + V I +T G
Sbjct: 114 KLR---GLWEGIATVIHCGDEPTPEGMLCYE--ELIAAHEPVKDERVGGERLAGIFYTGG 168
Query: 182 TTGSPKGVVISHSALI--VQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGAC 239
TTG PKGV++SH+ ++ SL +++ ++ AP+ H+ L + +VG
Sbjct: 169 TTGFPKGVMLSHANILSSANSLV-VSVQASTPGGRTMYCAPMFHLAALGNWFVQNLVGGS 227
Query: 240 HVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGL 299
H+F+P FE + L AV H TS + VPA++ L V + S++++ G +
Sbjct: 228 HLFLPAFEPAAVLTAVADHRPTSTLLVPAMIQMLVDHPSVGE--HDLTSLQRLNYGASPI 285
Query: 300 PSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ 359
L++ A FP A+L YGMTE + A +TP H
Sbjct: 286 SETLLERAMQVFPAAELAQGYGMTE--------------------MAPAIAALTPEDHHD 325
Query: 360 PQGV-CVGKPAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
+ + G+ V+L++ V G I+ RGA+ ML YW+ KP + +
Sbjct: 326 ARLLRAAGRAVAGVDLRIVDAEDREVPRGAVGEIVVRGANTMLGYWN----KPGETAAAL 381
Query: 414 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W+ TGD +DD G V++V R I SGGENVY EVE + HP + V+GI
Sbjct: 382 RGGWMHTGDAAFMDDNGYVYIVDRVKDMIVSGGENVYSAEVENAVAAHPAVAACAVIGIP 441
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL-- 528
++ E V A + L+ ++ E +R HC+ + +KAPR
Sbjct: 442 DSDWGERVHAVIVLKPG---------HTATTTE-------IRDHCKSL-IARYKAPRSCD 484
Query: 529 FVLWRKPFPLTSTGKIRRDEVRREVMSH 556
FV PL+ GKI + E+R+ S+
Sbjct: 485 FV---DAMPLSPAGKILKRELRKPYWSN 509
>gi|423681526|ref|ZP_17656365.1| acyl-CoA synthetase [Bacillus licheniformis WX-02]
gi|383438300|gb|EID46075.1| acyl-CoA synthetase [Bacillus licheniformis WX-02]
Length = 539
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 148/550 (26%), Positives = 239/550 (43%), Gaps = 77/550 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIVAPLNYRWS 92
Q+ V++ +A+GLL +G++ G+ VAI A N EWIL A A IG ++ +N +
Sbjct: 38 QELVEETSKIAKGLLALGIQKGEHVAIWASNIP---EWILLQFATARIGAVLVTVNTSYQ 94
Query: 93 FKEASRAIT-SIRPVMLVTDESSDSWYLEL------QHTAIPSLRWHVSLGSSSSD---- 141
+E + S + + D + Y+ + +P L+ V LG + +
Sbjct: 95 ARELEYLLEHSDSTTLFLMDGYKGTSYINMIDEIMKNPEKLPKLKNLVYLGKNETPEHMT 154
Query: 142 -FVNKRDM----LTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
F M AD+ + R TH + + + +TSGTTG PKGV+++H +
Sbjct: 155 AFAEIAKMGETVSDADLFE----REQSLTH----DDVINMQYTSGTTGFPKGVMLTHYNI 206
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
+ + +G +D PL H G + S +A + GA + I +F+ L+ V
Sbjct: 207 VNNAAIVADRMGLTSEDRLCIPVPLFHCFGCVLSTLACVASGAAMLPIIEFKPDIVLQTV 266
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
E+ T L VP + +A L S++ + G P E+MK+
Sbjct: 267 EKERCTGLQGVPTMF--IAELTHPDFANYDLSSLRTGIMAGSPCPREVMKKVMKQMNMTD 324
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ AYG TE+S +T T+ D T+E + VGK PHVE+K
Sbjct: 325 ITIAYGQTESSPVITQTTVTD-TIERRVE-------------------TVGKVHPHVEMK 364
Query: 376 VCSD------GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
+ G G + TRG VM Y+ A + WL TGD+ +D G V
Sbjct: 365 IVDPDTGETLGPDEQGELCTRGYLVMKGYYKMDEATKKAIDEDGWLHTGDLAEMDRDGYV 424
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+ GR I GGEN+YP E+E L +H I+ + VVG+ + + E A ++ R +
Sbjct: 425 RITGRLKDMIVRGGENIYPREIEEFLYEHEDIVDVQVVGVPDEKYGEKTAAFIKCRPGKK 484
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
L+ E +R C+ L+ +K P +V +PLT++GK+++ +
Sbjct: 485 ----------------LTLEDVRDFCK-GQLSYYKIPE-YVFLIDEYPLTASGKVQKYVL 526
Query: 550 RREVMSHLKS 559
R L S
Sbjct: 527 RDRAAELLAS 536
>gi|423404502|ref|ZP_17381675.1| hypothetical protein ICW_04900 [Bacillus cereus BAG2X1-2]
gi|423474864|ref|ZP_17451579.1| hypothetical protein IEO_00322 [Bacillus cereus BAG6X1-1]
gi|401647012|gb|EJS64626.1| hypothetical protein ICW_04900 [Bacillus cereus BAG2X1-2]
gi|402437577|gb|EJV69599.1| hypothetical protein IEO_00322 [Bacillus cereus BAG6X1-1]
Length = 518
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 237/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDTVSVYLYNCREFVNVSLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNAASSDKVDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPG++ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVVV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ E L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 ------KKDEAITEEDLEIYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|421506195|ref|ZP_15953120.1| AMP-dependent synthetase and ligase [Pseudomonas mendocina DLHK]
gi|400342977|gb|EJO91362.1| AMP-dependent synthetase and ligase [Pseudomonas mendocina DLHK]
Length = 515
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 154/558 (27%), Positives = 249/558 (44%), Gaps = 70/558 (12%)
Query: 8 HICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS 67
++ + +SR A + + + T Q + LA GL ++GL+ +AI ALN
Sbjct: 2 NLGKIISRSARYWPDHEALVDSKQRITFAQLERRTNRLASGLFDLGLQPAAHIAILALNR 61
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
E +A + P+N R S E + + ++T E + L+ + P
Sbjct: 62 VELAEAEVAFYKAAMVKVPINARLSLDEIIQILNDSHSQAVIT-EGRFAAALQARRAETP 120
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPK 187
LRW +SL + D + +L G S P A + ++ +TSG++G K
Sbjct: 121 RLRWIISLDDEAGDIAYRA------LLAGGS--EAPVHSDPADDALAVLHYTSGSSGVLK 172
Query: 188 GVVIS---HSALIVQSLA---KIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHV 241
++S ALI +S+A + A G DV H P+ H G+ M +L VGAC++
Sbjct: 173 AAMLSFGNRKALIRKSIASPTRRAAPG----DVMAHVGPITHASGMQ-IMPLLTVGACNL 227
Query: 242 FIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPS 301
+ +++ + LE +E+ VT L VPA++ L V++ S++ ++ G +
Sbjct: 228 LLERYDDRLLLETIERERVTRLFLVPAMINRLVNFPEVERF--DLSSLRLVMYGAAPMAP 285
Query: 302 ELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
L+K A F L YG ET S +T +T D +E G+ + +
Sbjct: 286 ALVKRAIEVFGPI-LAQGYGAGETCSLVTVLTEQDHLIED--------GDFS-------R 329
Query: 362 GVCVGKPAPHVELKVCSDG-----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
G+ +L+V +D +G I+ +G +M YW P + T EV D
Sbjct: 330 LASCGRCYFETDLRVVNDNFEDVKPGEIGEIVVKGPDIMQGYWQ----APEL-TAEVMRD 384
Query: 417 ----TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
TGD+ ++D+ G V++V R+ I SGG N+YP EVE VL P + VVG+ +
Sbjct: 385 GYYLTGDLATVDERGYVFIVDRKKEMIISGGFNIYPTEVEQVLYSLPQVFEAAVVGVPDE 444
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
+ E V A V L+ ES LS+E + +HC ++L FK PR V +
Sbjct: 445 QWGEAVRAVVVLKP----GES------------LSAEAIIEHC-GRSLASFKKPRA-VDF 486
Query: 533 RKPFPLTSTGKIRRDEVR 550
K P GK+ R +R
Sbjct: 487 AKELPKNPNGKVVRRLIR 504
>gi|348509256|ref|XP_003442166.1| PREDICTED: acyl-CoA synthetase family member 2, mitochondrial-like
[Oreochromis niloticus]
Length = 609
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 155/565 (27%), Positives = 253/565 (44%), Gaps = 69/565 (12%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
+R +V+ + T QF QDV A GLL +GL+ GD + + N+ ++ + A A
Sbjct: 85 EREAVIFVQDGIQKTFAQFQQDVDKAAAGLLALGLKRGDRLGVWGPNTYQWILFQFASAK 144
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYL-----------------ELQ 122
G I+ PLN + KE + +R +V S + + +
Sbjct: 145 AGIILVPLNPAYQVKEVEFTLLKVRCKAVVCPTSFKTQRFCEMLREICPEIGTTPGGKFK 204
Query: 123 HTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGT 182
+ +P L+ ++ S ++ D++ A + + + + + + I FTSGT
Sbjct: 205 SSRLPYLQMVIATDSRQPGMLHVDDVMQAGESRHHK-ELMDLQSKLSFDDPINIQFTSGT 263
Query: 183 TGSPKGVVISHSALIVQSLAKIAIVGYG-EDDVYLHT-APLCH-IGGLSSAMAMLMVGAC 239
TG+PKG V+SH ++ + VGYG V + P H G + M+M + G
Sbjct: 264 TGNPKGAVLSHHNIVNNAYFMGLRVGYGWRPRVRVCVPVPFYHCFGSVLGGMSMAVHGIT 323
Query: 240 HVFI-PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGG 298
VF + S + LEA++ + P + DL + K SV+ + GG
Sbjct: 324 LVFPSAAYNSFANLEAIQSEKCNFVYGTPTMFTDLLSQDLQKYDL---SSVEAGVMGGSP 380
Query: 299 LPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVH 358
P E+++ T ++ YG TE +S LTF+ P+ + N+V
Sbjct: 381 CPPEIVRRLTTDMNMKEITLCYGTTE-NSPLTFLGF-----------PEDNEELKINTV- 427
Query: 359 QPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGE 412
G +G H E KV + + G +L RG+ VM YWD+ V + +
Sbjct: 428 ---GCVLG----HTEAKVVDPTTGEIVPLGASGELLIRGSCVMHGYWDEPEKTREVISQD 480
Query: 413 VWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANA 472
W TGD S++ G + GR I GGEN+YP E+E L +HP + + VVG+ +
Sbjct: 481 RWYRTGDTASLNSLGYCSIEGRIKDMIIRGGENIYPAEIEQFLYKHPKVKEVQVVGVKDE 540
Query: 473 RLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLW 532
RL E V AC++L+E QSS S+E +R C+ + L+ FK P +VL+
Sbjct: 541 RLGEQVCACIKLKEG---------QSS-------SAEEIRAFCKGQ-LSHFKIPH-YVLF 582
Query: 533 RKPFPLTSTGKIRRDEVRREVMSHL 557
+PLT +GKI+++ ++ V L
Sbjct: 583 VDSYPLTVSGKIKKNILKETVEKKL 607
>gi|229149210|ref|ZP_04277450.1| Acyl-CoA synthase [Bacillus cereus m1550]
gi|423630218|ref|ZP_17605966.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD154]
gi|228634240|gb|EEK90829.1| Acyl-CoA synthase [Bacillus cereus m1550]
gi|401265516|gb|EJR71603.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD154]
Length = 518
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 238/534 (44%), Gaps = 54/534 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCHEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W + S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ +I + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVNI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV---------- 460
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 -------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|84394538|ref|ZP_00993246.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
gi|84374840|gb|EAP91779.1| putative long-chain-fatty-acid-CoA ligase [Vibrio splendidus 12B01]
Length = 534
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 249/560 (44%), Gaps = 65/560 (11%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L R A++ N V G + Q Q N+A L +GL+ GD VA+S N ++
Sbjct: 8 LERSASLFPNKVALRMGTDEVSFSQLEQLSGNVAANLKRLGLKKGDKVALSCPNVTYFPI 67
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYL--------ELQHT 124
+ G +V PLN + +E + + + E S+ + E +
Sbjct: 68 AYYGILKAGCVVVPLNVLFKAREIAYHLNDSDAKAYLCFEGSEELPIGRYGLQGFEQANH 127
Query: 125 AIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTH-SWAPEGAVIICFTSGTT 183
+ + G+ ++ N++ AD L G L PF + +G +I +TSGTT
Sbjct: 128 CEHFVEMPIPAGADTTSERNEQHESIADWL-GQPLS--PFESVACHGDGTAVILYTSGTT 184
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVF 242
G PKG +SH+ + +++ ++ D + T PL H G + M A ++ G+ V
Sbjct: 185 GQPKGAELSHTNMQTNAMSSQYLMRLEYSDTTMATLPLFHSFGQTVMMNASVLTGSTMVL 244
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADL-----ATLIRVKKTWKGRDSVKKIL---- 293
IP+FE ++ + H V+ VP + L + ++ T K + VK L
Sbjct: 245 IPRFEPSLVIDQIINHKVSVFAGVPTMYIALLKAGEESPDSLENTSKRSEQVKHSLRLGV 304
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
+GG +P E++++ + F + ++ YG++ET+ TF + G+
Sbjct: 305 SGGASMPLEVIRQFESRF-ELPVLEGYGLSETAPVATFNHID--------------GDRL 349
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEV 413
SV QP +C G +++ S +G + + VM Y+ +P + +
Sbjct: 350 SGSVGQP--LC-GHLIKITDIQGNSVAMGELGEVCIKSPSVMKGYYQ----RPEATAEAI 402
Query: 414 ---WLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIA 470
W TGDIG D+ GN+++V R I GG NVYP E+E VL+ HP + + VVG
Sbjct: 403 RDGWFLTGDIGRTDEHGNLFIVDRVKDMIIRGGYNVYPREIEEVLMCHPDVEMVAVVGEH 462
Query: 471 NARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFV 530
+ RL E + A V L E Q CD S L CRE+ L +K PR V
Sbjct: 463 HDRLGEEIHAHVVLHEHTQ-----CD-----------SAALITWCREQ-LADYKYPRK-V 504
Query: 531 LWRKPFPLTSTGKIRRDEVR 550
RK P+T+TGKI + E+
Sbjct: 505 FIRKALPMTATGKILKRELH 524
>gi|365897486|ref|ZP_09435486.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. STM 3843]
gi|365421742|emb|CCE08028.1| AMP-dependent synthetase and ligase [Bradyrhizobium sp. STM 3843]
Length = 536
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 237/546 (43%), Gaps = 86/546 (15%)
Query: 29 GNRHN-TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVAFIGGIV 84
G RH T ++D +AR LL G+ VAI + N EW+L A G +
Sbjct: 51 GRRHRWTFTDLLRDAEAVARALLH-RFAPGEHVAIWSANQP---EWVLIEFGAALAGLTL 106
Query: 85 APLNYRWSFKEASRAITSIRPVMLVTDESSDSWYL----ELQHTAIPSLRWHVSLGSSSS 140
+N + E + + + ++ +S + L + TA+P+LR + L SS
Sbjct: 107 VTVNPAYLRDELAFVLRQSQACGVIVQDSYRNRDLLAIIDDARTALPALREVIPL-SSWP 165
Query: 141 DFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQS 200
F+ R + SLP A I +TSGTTG+PKG ++H L +
Sbjct: 166 AFIASR-----------ASASLPAV---ACNDVAQIQYTSGTTGAPKGARLTHRNLANNA 211
Query: 201 LAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALEAVEQHC 259
+G + DV+++ P+ H G S + L G HV P F++ L +E+
Sbjct: 212 RLFAQTIGADDHDVWINPMPMFHTAGCSLITLGALQTGGTHVLPPGFDADLMLRLIEEER 271
Query: 260 VTSLITVPAI---MADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKL 316
T VP + M D L R + S +K++ GG +P EL++ A +
Sbjct: 272 GTISGGVPTMLGRMLDSPALDRHDLS-----SWRKVMLGGAPVPPELVRRAQAR--GLTV 324
Query: 317 ISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKV 376
+ +G TE S +T + P+ H VG+P P E+K+
Sbjct: 325 VIGFGQTEASPYVT--------------------HTLPDDPHPDWITTVGRPLPQTEIKI 364
Query: 377 CSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVW 430
S +G I RG VM Y++ S + WL TGD+GS+DD G
Sbjct: 365 IDPDSGETLPRGRIGEICARGYSVMKDYFNDPQGTASAIDADGWLHTGDLGSLDDYGYCR 424
Query: 431 LVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQW 490
+ GRR I GGEN+YP E+E VL HP ++ VVGI +A E+ V V L+ + Q
Sbjct: 425 VQGRRRDLIIRGGENIYPREIEDVLHTHPAVLDASVVGIPDADWGEVPVGFVILKPNQQ- 483
Query: 491 SESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGKIRRDE 548
+ D+ L Q CR + L +K PR WR FP T++GKI++ +
Sbjct: 484 --GDADE-------------LMQFCRAR-LASYKVPR---TWRFVAQFPQTASGKIQKFK 524
Query: 549 VRREVM 554
+R + +
Sbjct: 525 LRDDYL 530
>gi|229099334|ref|ZP_04230265.1| 2-succinylbenzoate--CoA ligase [Bacillus cereus Rock3-29]
gi|423440405|ref|ZP_17417311.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG4X2-1]
gi|423449446|ref|ZP_17426325.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG5O-1]
gi|423532821|ref|ZP_17509239.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus HuB2-9]
gi|228684152|gb|EEL38099.1| 2-succinylbenzoate--CoA ligase [Bacillus cereus Rock3-29]
gi|401128119|gb|EJQ35821.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG5O-1]
gi|402419548|gb|EJV51827.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus BAG4X2-1]
gi|402464543|gb|EJV96233.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus HuB2-9]
Length = 481
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 250/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ G VA+ N + I A++++G + LN R S
Sbjct: 29 TFMQLHEKVVSVCERLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + + S ++ A I
Sbjct: 89 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSFAEVMNGSKAE---------ASI 132
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ +SL E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 133 QEEFSL-----------EEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDD 181
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 182 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 241
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 242 --LERLGEETYP--SSLRCMLLGGGPAPKPLLETCVEK--GIPVYQTYGMTETSSQICTL 295
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 296 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 334
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 335 VKGPNVTGGYFNREDATRETIQNG--WLYTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 392
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+A+ ESW Q + +S + +
Sbjct: 393 PAQIEEVLLSHPAVAEGGVVGMAD--------------ESWGQVPAAFVVKSGE-----V 433
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E + C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 434 TEEEILHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 478
>gi|404424017|ref|ZP_11005628.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403652493|gb|EJZ07537.1| AMP-binding domain protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 538
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 237/544 (43%), Gaps = 61/544 (11%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+++V + R T + +V +ARGL+ G++ GD V I A N ++ LA A IG
Sbjct: 33 DALVEVETGRRWTYAELNAEVDAVARGLIASGVQKGDRVGIWAPNCAEWVMLQLATAKIG 92
Query: 82 GIVAPLNYRWSFKEASRAI--TSIRPVMLVTD-ESSD--SWYLELQHTAIPSLRWHVSLG 136
I+ +N + E + + + IR ++ T +SSD + E+Q P+L+ + LG
Sbjct: 93 AILVNINPAYRTHELAYVLKQSGIRTLVSATAFKSSDYVTMVAEVQADC-PALKDVLFLG 151
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
+ D L A+ +LR+ + + I +TSGTTG PKG +SH +
Sbjct: 152 TLD------WDQLCAEQADDTALRAR--IGELSNTDPINIQYTSGTTGFPKGATLSHRNI 203
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSALEA 254
+ ++ + D P H G+ + L GA V P F+ L
Sbjct: 204 LNNGFFVGGLIKFDRGDRVCIPVPFYHCFGMVMGNLGALTHGATIVIPAPGFDPGITLAT 263
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
VE T+L VP + +A L S++ + G P E+MK A
Sbjct: 264 VESERCTALYGVPTMF--IAMLGHPDFAQFDLSSLRTGIMAGSVCPVEVMKRVVADMHMA 321
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
++ YGMTETS ++ TL D LE + +G+ PH+E+
Sbjct: 322 EVAICYGMTETSP-VSCQTLVDDDLER-------------------RTATIGRAHPHIEV 361
Query: 375 KVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
K+ + G TRG VML YWD+ + W+ TGD+ + + G
Sbjct: 362 KIVDPDTGETVERGQPGEFCTRGYSVMLGYWDEPAKTAEAIDADGWMHTGDLAVMREDGY 421
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+VGR + GGENVYP E+E L HP I V+G+ +A+ E V A VR+
Sbjct: 422 CAVVGRIKDMVIRGGENVYPREIEEFLYTHPDIDDAQVIGVPDAKYGEEVCAWVRM---- 477
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
K L +E LR K L +K PR +V+ FP+T TGKIR+ +
Sbjct: 478 -----------KPGRAPLDAESLRAFATGK-LAHYKIPR-YVVVVDEFPMTVTGKIRKVD 524
Query: 549 VRRE 552
+R E
Sbjct: 525 MRDE 528
>gi|333906076|ref|YP_004479947.1| fatty-acid CoA ligase [Streptococcus parauberis KCTC 11537]
gi|333121341|gb|AEF26275.1| fatty-acid CoA ligase [Streptococcus parauberis KCTC 11537]
Length = 512
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/525 (27%), Positives = 234/525 (44%), Gaps = 68/525 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q+ Q +NLA LL G+++GD VA+ + N + +++ A IG I PLN+R
Sbjct: 29 TFQEMNQRAINLADYLLLRGVKAGDRVALFSSNDIAHFDYLFACTKIGAIFIPLNWRLRD 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
E + + P +L S + + T I + + + S S ++++ +
Sbjct: 89 TEIKQIVEDADPKLLAY-----SRIHKTRLTLIDENLFDLDIDSESY-----QEIVVSQT 138
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
K +R P E ++ +TSGTTG KG +ISH A+ +L I D
Sbjct: 139 SKSIPIRDFP------DEDTAVLIYTSGTTGKTKGAMISHMAIRHNALVSIPSWNISASD 192
Query: 214 VYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMAD 272
+ T P+ H GL + +LM G + F + +E + T VP +
Sbjct: 193 RGMTTTPMFHTAGLFCFTIPILMAGGQIIVQRFFYTDETIEIIRDFKPTKAFFVPTMCYM 252
Query: 273 LATLIRVKKTWKGRDSVKKILNGGGGLPSELMK-EATNSFPKAKLISAYGMTETSSSLTF 331
LA KK + S+K I++GG L + + A P L+++YG+TE + F
Sbjct: 253 LADSKLFKK--ENFKSLKFIISGGAPLSENIFQLFADEGLP---LVNSYGLTEVGPNNFF 307
Query: 332 MTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG-----SSHVGR 386
+T P+ + + + VGKP +K+ + VG+
Sbjct: 308 IT------------PE---------IQRIKPTAVGKPILFNTVKLVDENGQEVSDGEVGQ 346
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
++ YW+ A+ + + ++ TGD+ D G+ ++VGR I +GGENV
Sbjct: 347 LIINSEARFSGYWNN-QAETDKAIIDNFVYTGDLAKKDPEGDYFIVGRSKEMIITGGENV 405
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
YP EVE VL +HP ++ VV G+ A+ E VVA + L+E+ N ++L
Sbjct: 406 YPSEVENVLNKHPEVMDSVVFGLPTAQWGESVVAAIILKEA-------------NPQILD 452
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
S L+ H +E NL G+K P+ + FP T GKI R + +
Sbjct: 453 S---LKPHVQE-NLAGYKTPKRYYFLND-FPKTPIGKIDRKALEK 492
>gi|262376316|ref|ZP_06069546.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
gi|262308917|gb|EEY90050.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter lwoffii SH145]
Length = 562
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 254/563 (45%), Gaps = 78/563 (13%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILA--V 77
+R++VV++ N + +Q + V A LL++G++ GD +AI + N +EW +
Sbjct: 35 ERDAVVSLHQNIRLSYRQLQEQVNAFACQLLKMGMQKGDRLAIWSPNC---VEWTITQFA 91
Query: 78 AFIGGIV-APLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYL------ELQHTA-- 125
AF GI+ LN + E + + LV +++D + ELQ T
Sbjct: 92 AFKAGIILVNLNPAYKSNELEYVLNKVSCKGLVIAAQFKTTDYQEILTKIAPELQETEGK 151
Query: 126 ------IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPE----GAVI 175
+P L+ + + +++ D+L S + L + E +
Sbjct: 152 FLNAERLPHLKHVIKIDDQQHTGIHR----FQDLLSSPSAQELEQLQQISSELQFDETIN 207
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAML 234
I FTSGTTG+PKG +++H+ ++ + G +D + PL H G+ +A +
Sbjct: 208 IQFTSGTTGNPKGTMLTHNNILNNGYFVGEAIHLGPEDRVCISVPLFHCFGMVMGNLACI 267
Query: 235 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
G+ ++ F L+A++Q T+ VP + +A L + S++ +
Sbjct: 268 THGSAMIYPSAVFNPLETLKAIQQERCTAAYGVPTMF--IAVLEHEQFDEFDLSSLRTGI 325
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+M+ +++ YGMTET+ P + + T
Sbjct: 326 MAGSPCPQEIMQRVIERMHMSEITICYGMTETA-------------------PVSAQSST 366
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSV 408
+SV Q VG+ PH+E+K+ + +G + RG VML YW+ V
Sbjct: 367 ADSVEQRVST-VGRVHPHLEVKIVDENGKVVPRGQLGELCVRGYSVMLGYWEDQDKTQEV 425
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
W+ TGDI +DD G V + GR + GGEN++P+E+E L HP + + V+G
Sbjct: 426 IDAARWMHTGDIAEMDDEGFVKIKGRIKDVVIRGGENLFPKEIEDFLYTHPAVSDVQVIG 485
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
+ + + E + AC+ L E+ +E E +RQ+C+E +++ K PR
Sbjct: 486 VPDHKYGEELCACIILHENDPCTE----------------ETIRQYCKE-HISHNKVPR- 527
Query: 529 FVLWRKPFPLTSTGKIRRDEVRR 551
+V + + FP+T++GK ++ ++R
Sbjct: 528 YVRFFQEFPMTASGKAQKFKLRE 550
>gi|228957289|ref|ZP_04119051.1| Acyl-CoA synthase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802375|gb|EEM49230.1| Acyl-CoA synthase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 516
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 238/534 (44%), Gaps = 54/534 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCHEFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W + S
Sbjct: 77 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ +I + + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNEASSEKVNI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 299
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKPNEDAPAEPD 352
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 353 DVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFVAD 408
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 409 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV---------- 458
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 459 -------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 504
>gi|392983887|ref|YP_006482474.1| AMP-binding protein [Pseudomonas aeruginosa DK2]
gi|419753428|ref|ZP_14279832.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|384400550|gb|EIE46909.1| AMP-binding domain protein [Pseudomonas aeruginosa PADK2_CF510]
gi|392319392|gb|AFM64772.1| AMP-binding domain protein [Pseudomonas aeruginosa DK2]
Length = 564
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 154/556 (27%), Positives = 243/556 (43%), Gaps = 78/556 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFK 94
+Q + V AR + +GLR G+ + I A N +EW + A A +G ++ +N +
Sbjct: 49 RQLAERVDTYARAFIALGLRPGERLGIWAPNCAEWCITQ-FASAKVGAVLVNINPAYRSS 107
Query: 95 EASRAI---------------TSIRPVML--VTDESSDSWYLELQHTAIPSLRWHVSLGS 137
E A+ TS ML + E + S EL +P LR +SL
Sbjct: 108 ELEYALKQSGCSWLICAHAFKTSDYHAMLGDLLPELARSRPGELASERLPELRGVISLAE 167
Query: 138 SS-SDFVNKRDML-TADILKGYSLR----SLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+ + F++ + + A + LR SL F + I +TSGTTG PKG +
Sbjct: 168 RAPAGFLHWQGLPGLAAAVGAEELRQRQASLQFDEP------INIQYTSGTTGFPKGATL 221
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESK 249
SH ++ A +G G +D + PL H G+ + + G+ ++ P F+++
Sbjct: 222 SHYNILNNGYMVGASLGLGAEDRLVIPVPLYHCFGMVMGNLGCVTHGSTMIYPAPSFDAE 281
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATN 309
+ L AV + T+L VP + +A L ++ S++ + G P E+M+
Sbjct: 282 ATLLAVAEERATALYGVPTMF--IAELDHPRRREFDLSSLRTGIMAGATCPIEVMRRVIG 339
Query: 310 SFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
A++ AYGMTETS ++ T D LE VT VG+
Sbjct: 340 DMHMAEVQIAYGMTETSP-VSLQTGPDDGLEL---------RVT----------TVGRTQ 379
Query: 370 PHVELKVCSDGS-----SHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSID 424
P +E K+ +G + TRG VML YW+ A W+ TGD+ +D
Sbjct: 380 PRLESKIVDQTGRVVPRGEIGELCTRGYSVMLGYWNDSQATAEAIDPARWMHTGDLAVMD 439
Query: 425 DGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRL 484
D G V +VGR I GGEN+YP E+E HP + + V+GI + R E +VA ++L
Sbjct: 440 DDGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPDERYGEEIVAWIKL 499
Query: 485 RESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKI 544
+ E LR C+ + + FK PR F + FP+T TGKI
Sbjct: 500 HPGHHADD----------------EQLRAFCKAR-IAHFKIPRHFKFVDE-FPMTVTGKI 541
Query: 545 RRDEVRREVMSHLKSL 560
++ +R + ++ L
Sbjct: 542 QKFRMREISIEEIRLL 557
>gi|407981495|ref|ZP_11162192.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
gi|407376923|gb|EKF25842.1| AMP-binding enzyme family protein [Mycobacterium hassiacum DSM
44199]
Length = 549
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/555 (26%), Positives = 246/555 (44%), Gaps = 63/555 (11%)
Query: 10 CQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEW 69
C L+R A ++ ++ + T + V LA L G+ GD V I LN
Sbjct: 19 CNQLTRHAFMQPDATALRFMGKTTTWADLDRRVTRLAGALSRRGVAFGDRVLILMLNRTE 78
Query: 70 YLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTD---ESSDSWYLELQHTAI 126
Y+E ILAV +G I P+N+R + E + ++ + ++T+ + +L T
Sbjct: 79 YVESILAVNRLGAIAVPVNFRMTPPEIAYLVSDCQARFVITEPVLADVANAVRDLDET-- 136
Query: 127 PSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSP 186
L + G S+ + V + L + + +P H A +I +TSGTTG P
Sbjct: 137 --LATVIVAGGSTDERVLGYEELIEEPGDDPPVVDIPNDH------AALIMYTSGTTGRP 188
Query: 187 KGVVISHSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIP 244
KG V++H+ LI Q++ + +G +DV P+ HI G++ + ++ LM+G V P
Sbjct: 189 KGAVLTHTNLIAQAMTNLFTIGVDINNDVGFIGVPMFHIAGIAGNVLSGLMLGLPTVLYP 248
Query: 245 --KFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
F L+ +E VT + VPA + R K R+ + L+ G S+
Sbjct: 249 LGAFNPDELLDTLEAEQVTGIFLVPAQWQAVCAAQRAKP----RNLRLRALSWGAAPASD 304
Query: 303 -LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
L++E FP ++ +A+G TE S +T M + D + G
Sbjct: 305 VLLREMAEVFPGTQIFAAFGQTEMSP-VTCMLMADDAVRKLG------------------ 345
Query: 362 GVCVGKPAPHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLD 416
VG+ P V ++ D + VG I+ RG ++M YW++ A G W
Sbjct: 346 --SVGRVIPTVAARIVDDNMNDVPVGEVGEIVYRGPNLMSGYWNKPEATAEAFAGG-WFH 402
Query: 417 TGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTE 476
+GD+ D+ G +W+V R+ I SGGEN+Y EVE L +HP + + V+G + + E
Sbjct: 403 SGDLVRRDEEGYIWVVDRKKDMIISGGENIYCAEVENALAEHPAVAEVAVIGRPDEKWGE 462
Query: 477 MVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPF 536
+ VA V + +S ++ D + + L L +K P+ +
Sbjct: 463 VPVAVVAVNQSVA-GDTKLDLAELDAFL------------NDRLARYKHPKALEIV-DAL 508
Query: 537 PLTSTGKIRRDEVRR 551
P + GK+ + E+R+
Sbjct: 509 PRNAAGKVLKTELRK 523
>gi|374857096|dbj|BAL59949.1| AMP-dependent synthetase and ligase [uncultured candidate division
OP1 bacterium]
Length = 519
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/539 (26%), Positives = 240/539 (44%), Gaps = 59/539 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLE-IGLRSGDIVAISALNSEWYLEWILAVAF 79
R ++ T NR T + + + L+E +GLR GD+V+ + N ++ A
Sbjct: 23 REALYDATDNRRFTYAELDERAKRVGTYLIEQLGLRKGDVVSFISRNRVEPIDLYFATGK 82
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSS 139
IG I+APL+YR E + ++ I+P +E S +L+ S++ ++ GS +
Sbjct: 83 IGLILAPLSYRLGAPELNHLLSRIQPKAFFYEEHFQSLVEKLEFPN--SVKTTIAFGSPN 140
Query: 140 SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQ 199
S + +R +L +S+ H + T GTTG PK +I++ ++
Sbjct: 141 SQY--ERVVLKTPPKPVNRPKSMNDIH--------LYIHTGGTTGLPKICLITYRQMLWN 190
Query: 200 SLAKIAIVG--YGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQ 257
S I G +G + L T PL HIGG ++ + +G I +F LE +E+
Sbjct: 191 SFNLIVSGGGQHGINQKELLTFPLFHIGGWNTVTPVFHMGGHVTLIREFNPDLILELIER 250
Query: 258 HCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLI 317
+T V A++ +A+ R +T S++ + + G +E+M+ KL
Sbjct: 251 ERITHFGGVEAMLRMIASSPRFAQT--DLSSLEYVSSAGAPCSAEVMRPFWER--GIKLT 306
Query: 318 SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC 377
+YG+TE S F + Q Q+ +G P H + K+
Sbjct: 307 QSYGLTEGGPSNFFFVPVGRDWDIIKQKSQS----------------IGFPMFHCDYKIV 350
Query: 378 SDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWL 431
+ +G + RG H Y + V E W+ +GD+ D+ G V++
Sbjct: 351 DPQTGQPVAVGEIGELWFRGPHTFEGYLNDPEKTQRVLDSEGWVHSGDLARQDEDGFVYI 410
Query: 432 VGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWS 491
VGR + SGGEN+ PEEVE VL+QHP I + VVG+ +A+ ++ +A + L+ S
Sbjct: 411 VGRVDDMYISGGENICPEEVERVLIQHPAIAQVAVVGVPDAQWGQVGLAAIVLKPGASVS 470
Query: 492 ESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E L+Q CRE +L GF+ P+ F ++ PL+ GK+ R +R
Sbjct: 471 EDE----------------LKQFCRE-HLGGFRVPKYFKFVQE-LPLSGPGKVNRKILR 511
>gi|389817941|ref|ZP_10208454.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
gi|388464231|gb|EIM06564.1| AMP-binding domain protein [Planococcus antarcticus DSM 14505]
Length = 547
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 242/548 (44%), Gaps = 64/548 (11%)
Query: 33 NTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T ++F + LA+ + IG+ G+ VAI + N +L A +GG++ +N +
Sbjct: 34 KTYKEFDDETDRLAKAFIGIGIEKGEHVAIWSDNKREWLLSQFATGKMGGVLVTVNTSYQ 93
Query: 93 FKEASRAI-TSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN-KRDMLT 150
E + S +++ +E + Y+++ +T P L S+ + KR ++
Sbjct: 94 SSELEYLLEQSDATTLILGEEFKGTNYIDILNTVCPELATAEKGQIKSAKLPHFKRVIVM 153
Query: 151 AD----------ILKGYSLRSLPFT-----HSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
++ + ++ + F HS P+ + I +TSGTTG PKGV+++H
Sbjct: 154 SNNSYPGIYTWTEFEDFAEKVSDFEFEERFHSMQPDDVINIQYTSGTTGFPKGVMLTHLN 213
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEA 254
++ + E D P H G + MA + + +FE K L+
Sbjct: 214 VVNNGNLVGDTMSLTEKDRLCIPVPFFHCFGCVLGTMAAVTHSTTMIIAEQFEPKRVLQM 273
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
V+ T L VP + +A L + + +++ + G P E+MK+ +
Sbjct: 274 VQDEKCTGLHGVPTMF--IAELNHPEFSSFDTSTLRTGIMAGSSCPIEVMKKVITDMGAS 331
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
+ AYG TE+S +T T D +E + VGKP VE+
Sbjct: 332 DITIAYGQTESSPVIT-QTRADDDIEK-------------------RVSTVGKPHTEVEV 371
Query: 375 KVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
K+ + V G + TRG HVM Y+ A + E WL TGDI D+
Sbjct: 372 KIIDPATGEVVEIGIPGELCTRGYHVMKGYYKNEEATKTAVDREGWLHTGDIAVQDEEDY 431
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+ + GR + GGEN+YP E+E L QHP I + VVG+ + + E ++A V L++
Sbjct: 432 IAITGRIKDMVIRGGENIYPREIEEFLYQHPSIQDVQVVGVPDPKYGEELMAWVILKKGE 491
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDE 548
Q LS E L+ +C+ K ++ K PR ++ + K +P+T++GKI++ +
Sbjct: 492 Q----------------LSVEELKAYCKGK-ISRHKIPR-YIEFTKEYPMTASGKIQKFK 533
Query: 549 VRREVMSH 556
+R + H
Sbjct: 534 LRELSVEH 541
>gi|423409135|ref|ZP_17386284.1| hypothetical protein ICY_03820 [Bacillus cereus BAG2X1-3]
gi|401656132|gb|EJS73655.1| hypothetical protein ICY_03820 [Bacillus cereus BAG2X1-3]
Length = 518
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 240/535 (44%), Gaps = 56/535 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAMIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDYCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ +T+ P + L ++K D S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWNML-----LQKDLAEHDLTSMKIGVYGGAAMAPALVKECKERL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAE 352
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
V VG I+ RG +M Y ++ A S + W +GD+G D G +++
Sbjct: 353 PDDVLP--PYEVGEIILRGPTMMAGYHNREEANAK-SMYKGWYHSGDLGYFDKDGYLFVA 409
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R + + SGG N+YP EVE L HPG++ + V+G + E VVA V +++ SE
Sbjct: 410 DRVDDMVISGGVNIYPREVEDFLHSHPGVLDVAVLGEPDELWGERVVAVV-VKKDENISE 468
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 469 AD----------------LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|312198562|ref|YP_004018623.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311229898|gb|ADP82753.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 542
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 231/526 (43%), Gaps = 63/526 (11%)
Query: 49 LLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAI--TSIRPV 106
L+ G+ GD V+I A N ++ L + G + P+N R+ EA+ + T + +
Sbjct: 62 LVASGVEPGDRVSIWAPNGHRWMVAALGIYRAGATLVPVNSRFKAGEAAGLLRATGAKIL 121
Query: 107 MLVTDESSDSWYLELQ-HTAIPSLRWHVSLGSSSS-------DFVNKRDMLTADILKGYS 158
VTD + + + +P+L V L +S DFV + + A++
Sbjct: 122 FTVTDFLATDYAAAIHAEPDLPALGEVVVLDGPASPATTQWADFVTRAATVPAEV----- 176
Query: 159 LRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHT 218
+ + + I FTSGTTG PKG +++H + ++G G D YL
Sbjct: 177 --TAARAAALTGDDVSDIIFTSGTTGKPKGAMLAHGPSTRLYTSWADVIGLGHGDRYLLV 234
Query: 219 APLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLI 277
P H GL + + A L+VGA V P F+ + + VE +T L PA+ T++
Sbjct: 235 YPFFHTAGLKAGLLASLLVGATLVPYPVFDVPAVMRLVETEKITMLPGPPAVYQ---TIL 291
Query: 278 RVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDP 337
T S + + G +P EL++ +++ YG+TET+ ++ D
Sbjct: 292 NSDLTGYDLSSWRLAVTGSAAVPVELVRRLRADLGLRTVVTGYGLTETTGTVAMCRHTD- 350
Query: 338 TLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV-----GRILTRGA 392
P V + G + +E++V D + V G I+ RG
Sbjct: 351 ---------------DPELVSRTSGRALDG----IEVRVVDDAGTEVPRGEPGEIIVRGF 391
Query: 393 HVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVE 452
++M Y D A + WL TGDIG +DDGGN+ + R+ GG N YP E+E
Sbjct: 392 NIMTGYLDNPAATAETIDADGWLKTGDIGVMDDGGNIAITDRKKDMFIVGGFNAYPAEIE 451
Query: 453 AVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLR 512
++L +HP I + VVG+ + RL E+ +A V R + +E++
Sbjct: 452 SMLAEHPAIAQVAVVGVPDERLGEVGMAYVIPR--------------TGQPRPTPAEII- 496
Query: 513 QHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHLK 558
R++ + +KAPR +V PL +TGK+ R E+R + L+
Sbjct: 497 AWSRDR-MANYKAPR-YVEVVDALPLNATGKVVRYELRDRAAATLR 540
>gi|115522872|ref|YP_779783.1| acyl-CoA synthetase [Rhodopseudomonas palustris BisA53]
gi|115516819|gb|ABJ04803.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisA53]
Length = 526
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 248/560 (44%), Gaps = 72/560 (12%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSE 68
I + L R A + I G+ + ++F Q V L+RG++ +G++ GD VA+ A NS
Sbjct: 11 ISELLRRSARRMPDKTAVICGDVTWSYREFDQLVETLSRGIVSLGVQVGDRVALLARNSH 70
Query: 69 WYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPS 128
+ A+A G ++ P+N+ + +E + + +L TD P
Sbjct: 71 AFAAMRYALARAGAVLVPINFMLNAEEIAYILRHSGAKLLCTDSG-----------MAPQ 119
Query: 129 LRWHVSLGSSSSDFVNKRDMLTADILKGY-SLRSLPFTHSWAPEGAV--------IICFT 179
L +S FV + + ++G ++SL + AP+ + I +T
Sbjct: 120 AVAASKLDTSVEQFVWLPSLRPTEPVEGMIPMQSLLERGANAPDPQIELPNDALAQILYT 179
Query: 180 SGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMA-MLMVGA 238
SGT PKG +++H A+I Q + +A + DV +H P+ H L + + VGA
Sbjct: 180 SGTESLPKGAMLTHDAVIAQYASCVAACDFKPSDVMVHAMPMFHCAQLDVFVGPFVQVGA 239
Query: 239 CHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGR-DSVKKILNGGG 297
++ I ++ + +E++ VT+L P + +L+R K R +++K G
Sbjct: 240 MNIIIDAPVPETVFDMIERYAVTALFAPPTV---WISLLRSKAFDPARLQTLEKAYYGAS 296
Query: 298 GLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSV 357
+P ++ E PK + + YG TE + + T + D Q+ +A
Sbjct: 297 IMPVAVLMEMQQRLPKVRFWNLYGQTEIAPTATMLGPED-------QIRKAGS------- 342
Query: 358 HQPQGVCVGKPAPHVELKVCSDGS-----SHVGRILTRGAHVMLRYW-DQFLAKPSVSTG 411
GKP +VE +V D +G I+ R +M+ Y+ D+ + G
Sbjct: 343 -------AGKPVLNVETRVVDDDGRELPPGEIGEIVHRSPQLMIGYFHDEERTAQAFEGG 395
Query: 412 EVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIAN 471
W +GD+G DD G + +V R+ IKSGGENV EVE + Q G+ + V+G+++
Sbjct: 396 --WFHSGDLGVFDDEGYLTVVDRKKDMIKSGGENVASREVEETIYQLDGVSEVAVIGLSD 453
Query: 472 ARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVL 531
R E V A V + + L+ E + HC+ + + GFK+P+ V
Sbjct: 454 PRWIEAVTAIVVPKAG----------------VALTEEQVIAHCKAR-IAGFKSPKR-VF 495
Query: 532 WRKPFPLTSTGKIRRDEVRR 551
+ P +GKI + +R+
Sbjct: 496 FADNLPRNPSGKILKRNLRQ 515
>gi|379754329|ref|YP_005343001.1| o-succinylbenzoate--CoA ligase [Mycobacterium intracellulare
MOTT-02]
gi|378804545|gb|AFC48680.1| O-succinylbenzoate-CoA ligase [Mycobacterium intracellulare
MOTT-02]
Length = 517
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 151/557 (27%), Positives = 241/557 (43%), Gaps = 62/557 (11%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
Q I Q +SR A + I+ H T + +A L+ +G+R GD VA+ +
Sbjct: 2 QLGIGQWVSRRAFLNGGRTALISNGAHITYADLDRRTNQVAAALIALGVRKGDRVAMLLV 61
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA 125
NS ++E +L A IG + PLN R + E + +LV E + +A
Sbjct: 62 NSTEFIEVLLGCAKIGALAVPLNVRLAGPEIGYILADSGADVLVFHEP----FAAQARSA 117
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+ V + ++ D++ G + P I +TSGTTG
Sbjct: 118 VTESGVRVRHVVRAGGVAAPGELGYEDVVSGAAPE--PLNGDVDGRDPAFIMYTSGTTGR 175
Query: 186 PKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 243
PKG +++H L+ ++ + +G +DV + AP+ HIGGL + +L VG V +
Sbjct: 176 PKGAILTHDNLLWNAINVLGTDIGLRGEDVTVAVAPMFHIGGLGVHTLPLLYVGGTSVIM 235
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP--- 300
P FE ++ L+A+ H VT VPA+ L + +++ + GG +P
Sbjct: 236 PSFEPRATLQAMADHHVTVQFMVPAMWTALTQVPDFDSF--NLSALRFAMGGGSPVPLTV 293
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+ M+E F + +GMTET+ +T + NV+ +
Sbjct: 294 IDFMRERGVPFTEG-----FGMTETAPLVTVLDAE---------------NVSTRAG--- 330
Query: 361 QGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+G+ A HV+ ++ D VG ++ RG +V YW + A G W
Sbjct: 331 ---SIGRVAMHVDARIVDDDDRDVATDTVGELIVRGPNVFTGYWMKAEASAEALRGG-WF 386
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G +D G + LV R+ I SGGENVYP EVE VL +HP + V+G +A+
Sbjct: 387 HTGDLGRMDAEGFITLVDRKKDMIISGGENVYPIEVEQVLFRHPAVFDAAVIGGKDAKWG 446
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E R Q+ +E++ CRE+ L FK PR V +
Sbjct: 447 E--------RVVAVVVADPATQAPSAEEIV-------AWCRER-LAHFKCPR-DVHFVAE 489
Query: 536 FPLTSTGKIRRDEVRRE 552
P +TGK+ + E+R +
Sbjct: 490 LPRNATGKLLKTELRAQ 506
>gi|418048909|ref|ZP_12686996.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
gi|353189814|gb|EHB55324.1| o-succinylbenzoate--CoA ligase [Mycobacterium rhodesiae JS60]
Length = 541
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 250/560 (44%), Gaps = 61/560 (10%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLE 72
L+R A ++ ++ T +F + V LA L G+R GD V + LN ++E
Sbjct: 24 LARHALMQPDATALRFMGHTTTWAEFDRRVTALANALHRRGVRFGDRVMVLMLNRPEFVE 83
Query: 73 WILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWH 132
LA +G I P+N+R + E + + + ++VT+ ++ A P L
Sbjct: 84 ATLAANQLGAIAVPVNFRLTPPELAFLVQDCQTAVVVTETVLADVAKAVRDLA-PVLTDV 142
Query: 133 VSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVIS 192
+ G +S D V D L A+ + + +P + +I +TSGTTG PKG V++
Sbjct: 143 IVAGGASDDGVLGYDDLIAEEGEPHEPVDIPN------DSPALIMYTSGTTGRPKGAVLT 196
Query: 193 HSALIVQSLAKIAIVGYG-EDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESK 249
H+ L Q++ + G DV PL HI G+ + + L++G V P F+
Sbjct: 197 HTNLAGQAMTGMYTTGPDINHDVGFIGVPLFHIAGIGNILGGLILGTPTVIHPLGGFDPG 256
Query: 250 SALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LMKEAT 308
L+ +E VT + VPA + + K RD + L+ G S+ L++E +
Sbjct: 257 QLLDVLEAERVTGIFLVPAQWQAVCAAQKAKP----RDIRLRSLSWGAAPASDTLLREMS 312
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+FP +K+++A+G TE S +T M L D + G VGK
Sbjct: 313 ETFPDSKILAAFGQTEMSP-VTCMLLGDDAIRKRG--------------------SVGKV 351
Query: 369 APHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSI 423
P V +V + + VG I+ R +M YW+ A G W +GD+ +
Sbjct: 352 IPTVAARVVDEDMNDVPVGEVGEIVYRAPTLMAGYWNNPDATAEAFAGG-WFHSGDLVRM 410
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D G VW+V R+ I SGGEN+Y EVE VL HP I+ + V+G A+ E+ VA
Sbjct: 411 DADGYVWVVDRKKDMIISGGENIYCAEVENVLAAHPAIVEVAVIGRAHPTWGEVPVAVAA 470
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
+ +C +EL L+ L E+ L +K PR + P GK
Sbjct: 471 I---------SC------QELRLAE--LEGFLTER-LARYKHPRGLEIVDA-LPRNPAGK 511
Query: 544 IRRDEVRREVMSHLKSLPSN 563
+ + E+R + +++ P++
Sbjct: 512 VLKTELRIRFSASIETDPAD 531
>gi|330509006|ref|YP_004385434.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
gi|328929814|gb|AEB69616.1| AMP-dependent synthetase and ligase [Methanosaeta concilii GP6]
Length = 569
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 256/570 (44%), Gaps = 83/570 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AVA 78
+++V+I + T ++ +++ A+G + +GL+ GD +AI A N EWI+ A A
Sbjct: 38 DALVSIHQGKRYTYRELQKELNRTAKGFIALGLKKGDRLAIWATN---IAEWIITQYATA 94
Query: 79 FIGGIVAPLNYRWSFKEASRAI-TSIRPVMLVTDESSDSWYL----------------EL 121
G I+ +N + E ++ S V+L+ D S Y+ E+
Sbjct: 95 KAGIIMVNINPAYRTHELEYSLRQSEAQVLLLMDRFKSSDYVKMFYEVCPEAQTSKPGEI 154
Query: 122 QHTAIPSLRWHVSL-GSSSSDFVNKRDML-----TADILKGYSLRSLPFTHSWAPEGAVI 175
+P LR V + G S ++L D + SL F + +
Sbjct: 155 HSEKLPFLRTAVLIRGEKQSSMYTWEEVLRMGEEIPDEVLAERQASLDF------DDPIN 208
Query: 176 ICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAML 234
I +TSGTTG PKGVV++H ++ + + E+D P H G+ S MA +
Sbjct: 209 IQYTSGTTGFPKGVVLTHHNILNNGYFIGECMKFTEEDRLCIPVPFYHCFGMVLSNMASV 268
Query: 235 MVGACHVFIPK-FESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKIL 293
G V + F+ S L AVE+ T++ VP + +A L + S++ +
Sbjct: 269 THGTAMVLPAEHFDPVSTLSAVEKERCTAVHGVPTMF--VAELEHPDFSKFDLSSLRTGI 326
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E MK+ + +++ YG TE+S +T M+ D +L+
Sbjct: 327 MAGSPCPIEFMKKVSTLMNMREVVITYGQTESSPGIT-MSSTDDSLDL------------ 373
Query: 354 PNSVHQPQGVCVGKPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPS 407
+ VGKP PH E+K+ + + G I RG +M Y++ +A
Sbjct: 374 -------RVSTVGKPMPHTEMKIVDPKTGKIVPRGETGEICARGYMIMREYYNNPVATEQ 426
Query: 408 VSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVV 467
E WL TGD+G++D+ + GR + GGEN+YP E+E L HP I + V+
Sbjct: 427 CIDEEGWLHTGDLGTLDENDYCKITGRLKDMVIRGGENIYPREIEEFLYTHPAISDVQVI 486
Query: 468 GIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPR 527
G+ + + E ++A ++L+ + +S N+ E ++ C+ + + FK PR
Sbjct: 487 GVPDKKYGEELMAWIKLK----------NGASANQ------EEIKAFCKGR-IAHFKIPR 529
Query: 528 LFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
++ + FP+T +GKI++ ++R + + L
Sbjct: 530 -YIKFVDDFPMTVSGKIQKYKMREDSIKEL 558
>gi|256828217|ref|YP_003156945.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
gi|256577393|gb|ACU88529.1| AMP-dependent synthetase and ligase [Desulfomicrobium baculatum DSM
4028]
Length = 550
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 252/561 (44%), Gaps = 80/561 (14%)
Query: 22 NSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIG 81
+VV + N T ++F + V NLA+GL+ +G++ G+ VAI A N +++ + A A IG
Sbjct: 26 EAVVYVDRNFRMTYREFGELVDNLAKGLMAMGVQKGEKVAIWATNVPYWVAFQFATAKIG 85
Query: 82 GIVAPLNYRWSFKEASRAITSIR-PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
++ +N + E + +L+ D D+ Y++ + +P L+ S
Sbjct: 86 AVLLTVNTFYKTAELEYLLKQSECENLLLIDSFRDTDYVQTVYELVPELKTQERGYLRSE 145
Query: 141 DFVNKRDMLTADILKGYSLRSLP----------------FTHSWAPEGAVIICFTSGTTG 184
F + + + K + S+P S P V + +TSGTTG
Sbjct: 146 KFPDLKRVFFLGQEKHRGMYSMPELLALSRVTTEEDYRARQASLDPHDVVNMQYTSGTTG 205
Query: 185 SPKGVVISHSALIVQSLAKIAIVGY--GEDDVYLHT------APLCH-IGGLSSAMAMLM 235
PKGV+++H I G+ GE+ + H PL H G + +A +
Sbjct: 206 FPKGVMLTHY--------NIGNNGFWIGENQKFTHNDRVCLPVPLFHCFGCVLGVLAAIS 257
Query: 236 VGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNG 295
A V + F L AVE+ T+L VP + ++ L + S++ +
Sbjct: 258 HAATLVILEGFNPLMVLAAVEEEKCTALYGVPTMF--ISVLEHRSFSRYDLSSLRTGIMA 315
Query: 296 GGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPN 355
G P+ +M++ + ++ YG+TETS +T + D
Sbjct: 316 GSPCPAPVMEKVMDVMNMKEITICYGLTETSPVMTQTRVND------------------- 356
Query: 356 SVHQPQGVCVGKPAPHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVS 409
S+ Q + VG+ P +E++V + G + RG +VM Y++ A
Sbjct: 357 SIEQ-RTTSVGRAMPEIEVRVVDPETGEPVAPGVQGEVCCRGYNVMKGYYNNPDATAQAI 415
Query: 410 TGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGI 469
+ W+ +GD+G++D+ G + + GR I GGENVYP E+E L + GI + VVG+
Sbjct: 416 DPDGWMHSGDLGTMDEDGYLSITGRLKDMIIRGGENVYPREIEEFLYRMEGIKDVQVVGV 475
Query: 470 ANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLF 529
+ + E V A V L+E + + ++E +R CR + ++ +K P+ +
Sbjct: 476 PSRKYGEEVGAFVILKEGFDY----------------ATEDIRDFCRGQ-ISRYKIPK-Y 517
Query: 530 VLWRKPFPLTSTGKIRRDEVR 550
V++ +P+T++GKI++ ++R
Sbjct: 518 VVFLDEYPMTASGKIQKFKLR 538
>gi|452751622|ref|ZP_21951367.1| Long-chain-fatty-acid--CoA ligase [alpha proteobacterium JLT2015]
gi|451960841|gb|EMD83252.1| Long-chain-fatty-acid--CoA ligase [alpha proteobacterium JLT2015]
Length = 572
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 242/557 (43%), Gaps = 75/557 (13%)
Query: 26 TITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYLEWILA---VAFIG 81
T+ + T + ++ ++A L E G+ GD VAI+ N Y EWI A + ++G
Sbjct: 62 TVYEDERRTFGEIFEEAKHIASALQHEYGIAKGDRVAIAMRN---YPEWISAYVGIIYLG 118
Query: 82 GIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSD 141
+ PLN W+ +E +T +++ DE ++ IP + S S +
Sbjct: 119 AVAVPLNAWWTTEELEYGLTHSGTSLVIADEERLRRISRIEGLTIPKICVRTSASVCSEN 178
Query: 142 FVNK-RDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH------- 193
+DML A S R + + H + V + +TSG+TG+PKG V +H
Sbjct: 179 GARPLKDMLAA------SPREMWYVHPLGQDDDVTLMYTSGSTGNPKGAVSTHGGLLHGA 232
Query: 194 -----SALIVQSLAKIAIVGYGEDDVYLHTAPLCHI-GGLSSAMAMLMVGACHVFIPKFE 247
S L + +LA+ E V L PL HI G + + + +G V + K++
Sbjct: 233 MNYLASGLAMLALAEKEGTKLPEQQVMLLNVPLFHITGSVPVLLISIAIGRKLVIMYKWD 292
Query: 248 SKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEA 307
AL +E+ T + VP + +L L + ++ I GG P+E +K
Sbjct: 293 PTEALRLIEKERATYFVGVPTMSLEL--LQHPDRDKYDTSTLLDIAAGGAPRPAEHVKRL 350
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
T++F A+ YG+TET+ GN+ N + +P G+
Sbjct: 351 TDAF-AARPAIGYGLTETNGV-------------------GAGNIRDNYLAKPN--STGR 388
Query: 368 PA-PHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
+ P VE+ + + S++ G + R A + YW A + + W TGDIG
Sbjct: 389 ASKPMVEIGIKDEDGSNMPAGERGEVCIRSAANVRGYWRNPQATLESFSPDGWFHTGDIG 448
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
+DD G V++V R+ I GGEN+ +EVEA + HP + VVG+ + R+ E+V A
Sbjct: 449 YLDDDGYVFIVDRKKDIIIRGGENIAAQEVEAAIYAHPAVAEASVVGLPDERMGEIVGAV 508
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
V L+ Q + E L Q E +L FK P + ++P P +
Sbjct: 509 VYLKPGEQ----------------VERESLLQFLTE-DLAKFKIPERIWIVKEPLPKLGS 551
Query: 542 GKIRRDEVR-REVMSHL 557
GKI + +R R HL
Sbjct: 552 GKIDKVSLRTRYRAEHL 568
>gi|229056636|ref|ZP_04196042.1| Acyl-CoA synthase [Bacillus cereus AH603]
gi|228720705|gb|EEL72263.1| Acyl-CoA synthase [Bacillus cereus AH603]
Length = 516
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 249/548 (45%), Gaps = 57/548 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 17 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 76
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 77 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVTMIERDFPNSSFWYVEDDAPSY 136
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + + + +TSGTTG PKGV+ H
Sbjct: 137 ASSYHEKVNEASAEKVDIV----VDEMDYCS---------MLYTSGTTGHPKGVLHRHRD 183
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++++ L
Sbjct: 184 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 243
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ +T+ P + L ++K D S+K + GG + L+KE
Sbjct: 244 IQEEKITTFFAAPTMWNML-----LQKDLAEYDLTSMKIGVYGGAAMAPALVKECKERL- 297
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 298 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAE 350
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
VG I+ RG +M Y ++ A + S + W +GD+G D G +++
Sbjct: 351 PDDTLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVA 407
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R + + SGG N+YP E+E L HPG++ + V+G + E VVA V +++ SE
Sbjct: 408 DRVDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVV-VKKDENISE 466
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
++ L +C+E + L +K PR + L+ P ++GK+++ V R
Sbjct: 467 AD----------------LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK-FVLR 508
Query: 552 EVMSHLKS 559
E + +K
Sbjct: 509 ESLKGMKK 516
>gi|254385476|ref|ZP_05000803.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
gi|194344348|gb|EDX25314.1| acyl-CoA synthetase [Streptomyces sp. Mg1]
Length = 546
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 162/556 (29%), Positives = 243/556 (43%), Gaps = 62/556 (11%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAF 79
R+++V R T +F DV LA GLL++ + GD V I A N +EW L A A
Sbjct: 39 RDALVDRAAGRRWTYAEFAADVDALALGLLDLDITKGDRVGIWAPNRAEWTLVQ-YATAR 97
Query: 80 IGGIVAPLNYRWSFKEASRAITSIRPVMLVTDE---SSD-SWYLELQHTAIPSLRWHVSL 135
IG I+ +N + E + MLV E SSD + +E P L + V L
Sbjct: 98 IGAILVTVNPAYRSHELEYVLRQSGMRMLVAAERFKSSDYAAMIEEVRPGCPELEFTVLL 157
Query: 136 -GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHS 194
G +D + + +G R + + + I +TSGTTG PKG +SH
Sbjct: 158 DGPRWTDLLERGR-------QGDPARLARAQAELSADDPINIQYTSGTTGFPKGATLSHH 210
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVF-IPKFESKSAL 252
++ + Y E D P H G+ +A GA V P FE + L
Sbjct: 211 NILNNGFFVGELCHYTELDRVCIPVPFYHCFGMVMGNLACTSHGAAMVIPAPSFEPAATL 270
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
AVE TSL VP + ++ L ++ + G P E+MKE +
Sbjct: 271 AAVEAESCTSLYGVPTMF--ISALADPGFDSYDLSGLRTGIMAGSPCPVEVMKEVIDRMG 328
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
++ YGMTETS T T D ++E + VG+ PH+
Sbjct: 329 MTEVSICYGMTETSPVST-QTRADDSVER-------------------RVSTVGRVGPHL 368
Query: 373 ELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDG 426
E+KV + G + TRG VML YW + W+ TGD+ +D+
Sbjct: 369 EVKVVDPATGRTVPRGEPGELCTRGYSVMLGYWGEPERTAEAVDAARWMHTGDLAVMDED 428
Query: 427 GNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRE 486
G + + GR + GGEN+YP E+E L HP ++ + V+G+ + + E ++A VR+RE
Sbjct: 429 GYLSITGRIKDMVIRGGENLYPREIEEFLHTHPDVLDVQVIGVPDPKYGEELMAWVRMRE 488
Query: 487 SWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
+ L++E +R +C + L FK PR +V + FP+T TGKIR+
Sbjct: 489 GAE---------------PLTAETVRAYCAGR-LAHFKIPR-YVHVVEEFPMTVTGKIRK 531
Query: 547 DEVRREVMSHLKSLPS 562
E+ RE + L P+
Sbjct: 532 IEM-RETAARLLDPPA 546
>gi|456011868|gb|EMF45588.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 517
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 248/540 (45%), Gaps = 66/540 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V + + T Q+ +V LA L+ G+ GD V+ N+ + A A I
Sbjct: 19 KEALVDMRREKRWTYSQWSDEVHRLANALITAGVCKGDRVSSFLFNNSELPTVLFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA------IPSLR-WHV 133
G + P+N+R +E + + P +++ +E+ L+ T PS++ W +
Sbjct: 79 GAVFNPINFRLKPEELAYILNDATPEVVLFEEA-------LKETVGKVVEQFPSIQFWFI 131
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G V+ ++ +TA I L + T +A I +TSGTTG PKGV+ SH
Sbjct: 132 DEGVPEYA-VSYQEQVTAAISTD-PLVEVDETDIYA------IMYTSGTTGRPKGVIHSH 183
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSAL 252
+ QS+ IA++ Y ++DV + AP+ H L + + GA + + +F+ + A+
Sbjct: 184 RNMAEQSMMCIAMLKYTKNDVGMVIAPMFHCAELHCCIIPRVQAGASSIIMHQFDPQVAV 243
Query: 253 EAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFP 312
+ VE+ VT + VP + + + + K ++++ L G + L+++
Sbjct: 244 DTVEKEKVTVMFAVPTMWSMMTEITGANSKVK---TLQRGLYGAAPMAPVLVRQVKEVL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQ-----PQGVCVGK 367
+LI AYG TE ++TF L QL +A P H+ PQ +
Sbjct: 300 GVELIQAYGQTEMGPAITF-------LAEDEQLTKAGSAGKPAFNHEIRIVRPQDHGPSE 352
Query: 368 PAPHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
P VE VG I+ RG +ML Y+ + A V + W T D+G +D+ G
Sbjct: 353 PDDQVE-------PFEVGEIIVRGPSMMLGYFHRPQATARVMY-KGWYHTSDLGYVDEEG 404
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+++ R + I SGGEN+YP EVE L H + + V+GI + + E V+A + ++
Sbjct: 405 YLYVADRVDDMIISGGENIYPREVEDALHGHELVQDVAVLGIPDEKWGESVMAFIVVKND 464
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHC-REKNLTGFKAPRLFVLWRKPFPLTSTGKIRR 546
LL+ E L ++C +NL FK PR + + P ++GKI++
Sbjct: 465 -----------------LLTEEQLEEYCLNNENLARFKRPRTYRFVDE-LPRNASGKIQK 506
>gi|30019045|ref|NP_830676.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 14579]
gi|229042741|ref|ZP_04190480.1| Acyl-CoA synthase [Bacillus cereus AH676]
gi|229126300|ref|ZP_04255318.1| Acyl-CoA synthase [Bacillus cereus BDRD-Cer4]
gi|229143593|ref|ZP_04272017.1| Acyl-CoA synthase [Bacillus cereus BDRD-ST24]
gi|296501605|ref|YP_003663305.1| acyl-CoA synthetase [Bacillus thuringiensis BMB171]
gi|29894587|gb|AAP07877.1| Long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 14579]
gi|228639850|gb|EEK96256.1| Acyl-CoA synthase [Bacillus cereus BDRD-ST24]
gi|228657292|gb|EEL13112.1| Acyl-CoA synthase [Bacillus cereus BDRD-Cer4]
gi|228726575|gb|EEL77793.1| Acyl-CoA synthase [Bacillus cereus AH676]
gi|296322657|gb|ADH05585.1| acyl-CoA synthetase [Bacillus thuringiensis BMB171]
Length = 518
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 238/534 (44%), Gaps = 54/534 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCHEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W + S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ +I + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVNI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV---------- 460
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 -------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|218235524|ref|YP_002365660.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus B4264]
gi|218163481|gb|ACK63473.1| AMP-binding protein [Bacillus cereus B4264]
Length = 518
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 238/534 (44%), Gaps = 54/534 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCHEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W + S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ +I + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVNI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHM 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTM---WNMLLQKDLAQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV---------- 460
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 -------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|429751522|ref|ZP_19284435.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429180467|gb|EKY21687.1| AMP-binding enzyme [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 544
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/548 (26%), Positives = 237/548 (43%), Gaps = 69/548 (12%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ N T +F + V +A+GL+ +G++ GD I + N EW L A
Sbjct: 35 KEALISVHQNYRVTYTEFYEQVTAVAKGLIALGVKPGDRGGIWSPNC---YEWTLLQYAT 91
Query: 78 AFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTA---IPSLRWHV 133
A IG I+ +N + E I S + E S Y ++ A +LR V
Sbjct: 92 AKIGVIMVNINPAYRTSELIYVINQSGISFIFAAPEFKSSNYKKMIDDAREFTETLRKEV 151
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
G S F+ +T + L L F + V I +TSGTTG+PKGV +SH
Sbjct: 152 YWGDSWQRFLENGKKVTDEKL-------LSFEEKVQFDDPVNIQYTSGTTGNPKGVTLSH 204
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSA 251
++ + + Y E D P H G+ V + IP F++
Sbjct: 205 HNILNNAYFIGIRMNYTEKDRVCIPVPFYHCFGMVIGNLACTVHGATMVIPNDSFDATKT 264
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
LE +E+ TSL VP + ++ L + K S++ + G P E+MK
Sbjct: 265 LETIEKEKCTSLYGVPTMF--ISELYILDKHPYDLSSLRTGVMAGALCPPEIMKRVKEQM 322
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPH 371
++ YGMTETS P G +H VG H
Sbjct: 323 NMHEITICYGMTETS---------------PVSTQTKIGAPFEKQIHS-----VGTIHDH 362
Query: 372 VELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDD 425
+E+K+ + + + G + TRG VML+YW+ A V + W+ +GD+ +D+
Sbjct: 363 LEIKIINPETKAIVKRGENGELCTRGYSVMLKYWNSPQATQQVIDEQRWMHSGDLAMMDE 422
Query: 426 GGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLR 485
G + + GR I GGEN+ P+E+E L + G++ V+G+ + + E V+A ++ +
Sbjct: 423 DGYIHISGRIKDLIIRGGENISPKEIEDFLYTYVGVMDAQVIGVPSKKYGEEVMAWIKPK 482
Query: 486 ESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTSTGK 543
E ++L+ + L C+ + + +K PR W+ FP+T +GK
Sbjct: 483 EG----------------VILTEQELHDFCKGR-IAHYKVPR---YWKFVDEFPMTISGK 522
Query: 544 IRRDEVRR 551
IR+ E+R
Sbjct: 523 IRKVEMRE 530
>gi|386287432|ref|ZP_10064605.1| long-chain-fatty-acid--CoA ligase [gamma proteobacterium BDW918]
gi|385279564|gb|EIF43503.1| long-chain-fatty-acid--CoA ligase [gamma proteobacterium BDW918]
Length = 520
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 245/530 (46%), Gaps = 68/530 (12%)
Query: 37 QFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEA 96
Q ++ +A GL + G+ S D VAI N L ++A + + + PLNYR + E
Sbjct: 31 QIAEESHRIANGLQKHGIVSNDRVAILCENCPAVLSIVIACSRVAAVAVPLNYRLAAPEV 90
Query: 97 SRAITSIRP-VMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILK 155
+ + ++ D + +L+ A SL + + ++ + + +K
Sbjct: 91 AYVLNDAEAKILFAPDMALIDLLGKLRPLADASLPIIAASSEGAENWQHWLSQCVSTPVK 150
Query: 156 GYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIV------QSLAKIAIVGY 209
+R+ + ++ +TSGTTG PKGVV S + SLA A G
Sbjct: 151 SDDIRA---------DAGILQLYTSGTTGKPKGVVTSQRNIFALYTSAATSLANKA--GP 199
Query: 210 GEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA- 268
G D L AP HIGG+ + + ++ GA V F + ++ +E+H + ++ VPA
Sbjct: 200 GSRD--LVCAPNFHIGGIGTLLLPILAGASVVLHGSFNPMAVVDDLEKHKIDNMFVVPAM 257
Query: 269 IMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSS 328
IMA L + +++ + +++++L G + + L++ A N F K YGMTET+ +
Sbjct: 258 IMAILDYVPNIEQ--RDFSALRQLLYGASPISTGLLERALNIF-KCDFYQCYGMTETTGT 314
Query: 329 LTFMTLYD---PTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVC-SDGSS-- 382
+ ++ D L+ P +L Q+ G+P VE+KV S+G++
Sbjct: 315 IVSLSPEDHRRALLDQP-ELLQS----------------CGRPQAGVEVKVIDSNGNTLA 357
Query: 383 --HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIK 440
G +L R ML Y+++ A + + E W+ TGD ID+ G ++L R I
Sbjct: 358 CGETGELLIRSEANMLGYYNRDAAT-AETLQEGWIHTGDSAIIDEQGYIFLRDRIKDMIV 416
Query: 441 SGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSK 500
SG EN+YP E+E VL QHP + + VVGI + E +ACV L+ +E
Sbjct: 417 SGAENIYPIEIENVLSQHPAVGDVAVVGIPCPKFGEAPLACVVLKPGQSLTE-------- 468
Query: 501 NKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
E + CRE+ L G+K PR ++ P +GK+ + ++R
Sbjct: 469 --------EDMVTFCREQ-LAGYKIPRQLKIF-DVLPRNPSGKLLKKDLR 508
>gi|407797844|ref|ZP_11144760.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
gi|407017844|gb|EKE30600.1| AMP-binding domain protein [Salimicrobium sp. MJ3]
Length = 544
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 233/534 (43%), Gaps = 68/534 (12%)
Query: 44 NLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
+A+GL+ +G+ GD A+ + N +L A +GG++ +N + KE +
Sbjct: 45 QVAKGLMALGIGKGDHFAVWSDNKPEWLASQFASGKMGGVLVTVNTSYKAKELEYLLKQS 104
Query: 104 RPVMLVTDES-SDSWYL--------ELQHTA--------IPSLRWHVSLGSSSSDFVNKR 146
L+ ES + Y+ EL H+ +P+LR + LG
Sbjct: 105 DSETLIMAESYKGTSYVDILREICPELDHSEKGNLHSEKLPALRNVIVLGDQEYPGCYTW 164
Query: 147 DMLTA--DILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI 204
LTA + +K LR T S+ + + + +TSGTTG PKGV++SH ++ +
Sbjct: 165 KDLTAKGEEVKDEELREREATLSY--KDVINMQYTSGTTGFPKGVMLSHYNIVNNANQVA 222
Query: 205 AIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSL 263
+ ++D P H G + A + GA V I +FE K L+AV+ T+L
Sbjct: 223 DCMNMTDEDRLCIPVPFFHCFGCVMGTTATVAKGATMVVIEQFEPKLVLQAVKDEACTAL 282
Query: 264 ITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMT 323
VP + +A L + D+++ + G P E+MK N ++ AYG T
Sbjct: 283 HGVPTMF--IAELNHPEFENLKPDTLRTGIMAGSTCPMEVMKSVINEMGVEEITIAYGQT 340
Query: 324 ETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSH 383
E+S +T P+ + VG+ P+VE+KV +
Sbjct: 341 ESSPVIT--------------------QTRPDDPIDLRVKSVGRAHPNVEVKVVEPATGE 380
Query: 384 V------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 437
G + TRG VM Y+ + + + WL TGDI +D+ G V + GR
Sbjct: 381 EAERGMPGELCTRGYLVMEGYYKDEESTETAIDPDGWLHTGDIAEMDENGYVEITGRMKD 440
Query: 438 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 497
I GGEN+YP E+E L QHP ++ + VVGI +A E ++A W + + +
Sbjct: 441 MIIRGGENIYPREIEEFLYQHPDVLDVQVVGIPDATYGEEIMA-------WIIPKEDSEV 493
Query: 498 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
S K+ E+ + K P ++ + +P+T++GKI++ ++R
Sbjct: 494 SEKDIRAFFEGEISKH----------KIP-AYIYFTDEYPMTASGKIQKFKLRE 536
>gi|423515633|ref|ZP_17492114.1| hypothetical protein IG7_00703 [Bacillus cereus HuA2-4]
gi|401166710|gb|EJQ74012.1| hypothetical protein IG7_00703 [Bacillus cereus HuA2-4]
Length = 518
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 237/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVTMIERDFPNSSFWYVEDDAPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + F + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDFCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTM---WNMLLQKDLTKYDLTSMKIGVYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + P
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPKEDGPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DTLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPG++ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVVV----------- 460
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ E L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 ------KKDEAITEEDLEIYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|149180901|ref|ZP_01859403.1| acyl-CoA synthase [Bacillus sp. SG-1]
gi|148851420|gb|EDL65568.1| acyl-CoA synthase [Bacillus sp. SG-1]
Length = 524
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 139/540 (25%), Positives = 244/540 (45%), Gaps = 52/540 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++ + N T +++ ++V LA L++ G++ GD V N+E A A I
Sbjct: 19 KEALYDVRKNVRFTYREWNEEVNRLANALMQEGVKKGDRVTAFLFNTEELGTTFFACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSS 140
G + P+N+R ++ + + P +++ +++ + +++ + W
Sbjct: 79 GAVFNPINFRLMGEDVAFILNDAAPKVVLFEKAVEPVIASIENRFPHTAFW--------- 129
Query: 141 DFVNKRDMLTADILKGY-----SLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
F++K T D Y + +S + I +TSGTTG PKGV+ +H
Sbjct: 130 -FIDKE---TPDYAACYHEKVQASKSEEVKVEVGEDDLYAIMYTSGTTGRPKGVMHTHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEA 254
+ QSL IA E DV L AP+ H L A + + G +V + +F K LE
Sbjct: 186 MAEQSLIVIAATKLNEKDVGLVAAPMFHCAELHCAFLPRIHAGGTNVLLHQFAPKKVLEL 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
++ +T P + L++ S++ L GG + L+ A +
Sbjct: 246 IDSEKITKFFAAPTM---WNMLLQENLADYNLQSLQLGLYGGAPMAPSLV-HACHEMLGI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ AYGMTE ++TF++ D QL +A H+ + V + P
Sbjct: 302 GLVQAYGMTEMGPAITFLSEED-------QLTKAGAAGKACLNHEIRIVKPNEDGPSDPE 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
+ S+G S G I+ +G +M Y+++ A + + W +GDIG +D+ G +W+ R
Sbjct: 355 DILSNGES--GEIIVQGPCMMSGYFNRNEASEE-AMHKGWYHSGDIGYLDEEGFLWVKDR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ I SGGEN+YP EVE VL H G++ + +VG + E V A V
Sbjct: 412 VDDMIISGGENIYPREVEDVLHAHDGVLDVAIVGQPDNHWGESVTAFV------------ 459
Query: 495 CDQSSKNKELLLSSEVLRQHCREK-NLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
K+ LL+ + L + CR +L +K PR + L+ P ++GKI++ +R+++
Sbjct: 460 -----VKKDPLLTDDALDEWCRNSASLANYKRPRNY-LFVDELPRNASGKIQKFLLRKKM 513
>gi|453077839|ref|ZP_21980576.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452758116|gb|EME16511.1| long-chain-fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 505
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 232/519 (44%), Gaps = 62/519 (11%)
Query: 45 LARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIR 104
LA G+ GD VA+ N ++E +LA +G I P+N+R + EA +
Sbjct: 36 LASAFAARGVEFGDRVALITGNRPEFVETVLATNLLGAIAVPINFRLTGPEAGYILDDCG 95
Query: 105 PVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPF 164
++V D+ + L + +A+P+L + + S+D V +D++ G P
Sbjct: 96 AKIVVVDDIA----LPIVVSALPALAAPPQVVAVSADAVGTESY--SDLIDG---TPSPD 146
Query: 165 THSWAPEGA-VIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGY-GEDDVYLHTAPLC 222
H PE + +I +TSGTTG PKG +++H L Q + Y ED+V L +PL
Sbjct: 147 EHPDVPEDSPALIMYTSGTTGRPKGAILTHLNLQSQGTTVMRAFQYVDEDEVNLIASPLF 206
Query: 223 HIGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVP----AIMADLATL 276
HIG + S + + VG V P F + L+ +E VTS+ VP A+ AD
Sbjct: 207 HIGAVGSVIPTIYVGGTLVIHPTRAFVATEILDTIETEGVTSVFLVPTQWQAVCAD---- 262
Query: 277 IRVKKTWKGRDSVKKILNGGGGLPSE--LMKEATNSFPKAKLISAYGMTETSSSLTFMTL 334
T RD + + G G P+ L++ +++FP A I+ +G TE S +
Sbjct: 263 ----PTVPQRDLTRLRILGWGAAPASDTLLRAMSDTFPDAMNIALFGQTEMSPVTCVLHG 318
Query: 335 YDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGRILTRGAHV 394
D L G + + VT V P +E VG I+ RG +
Sbjct: 319 KD-ALRKLGSVGRPIATVTARVV-----------TPDME----DVAPGEVGEIVYRGPGM 362
Query: 395 MLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAV 454
ML YW++ A G W +GD+ +D+ G V++V R I SGGEN+Y EVE V
Sbjct: 363 MLGYWNKPDATADAFHGG-WFHSGDLVRVDEDGFVYVVDRAKDMIISGGENIYCSEVENV 421
Query: 455 LLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQH 514
L HP I+ + +VG + E VA V LR+S L E LR+
Sbjct: 422 LAGHPDIVEVSIVGRPHPVWGETPVAYVALRDSAA----------------LDIESLREW 465
Query: 515 CREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+L +K P L P ++GK+ ++ +R ++
Sbjct: 466 A-SASLARYKLPTALELIDA-LPRNASGKVLKNALREQI 502
>gi|229105493|ref|ZP_04236134.1| 2-succinylbenzoate--CoA ligase [Bacillus cereus Rock3-28]
gi|228677918|gb|EEL32154.1| 2-succinylbenzoate--CoA ligase [Bacillus cereus Rock3-28]
Length = 482
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 249/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ VA+ N + I A++++G + LN R S
Sbjct: 30 TFMQLHEKVVSVCEHLTHVGVKRAQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 89
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + + S ++ A I
Sbjct: 90 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSFAEVMNGSKAE---------ASI 133
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ +SL E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 134 QEEFSL-----------EEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDD 182
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 183 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 242
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 243 --LERLGEETYP--SSLRCMLLGGGPAPKPLLETCVEK--GIPVYQTYGMTETSSQICTL 296
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 297 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 335
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 336 VKGPNVTGGYFNREDATRETIQNG--WLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 393
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+A+ ESW Q + +S + +
Sbjct: 394 PAQIEEVLLSHPAVAEAGVVGMAD--------------ESWGQVPAAFVVKSGE-----V 434
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E + C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 435 TEEEIFHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 479
>gi|257791566|ref|YP_003182172.1| AMP-dependent synthetase and ligase [Eggerthella lenta DSM 2243]
gi|317488023|ref|ZP_07946604.1| AMP-binding enzyme [Eggerthella sp. 1_3_56FAA]
gi|325833247|ref|ZP_08165753.1| AMP-binding enzyme [Eggerthella sp. HGA1]
gi|257475463|gb|ACV55783.1| AMP-dependent synthetase and ligase [Eggerthella lenta DSM 2243]
gi|316912853|gb|EFV34381.1| AMP-binding enzyme [Eggerthella sp. 1_3_56FAA]
gi|325485629|gb|EGC88097.1| AMP-binding enzyme [Eggerthella sp. HGA1]
Length = 563
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 237/535 (44%), Gaps = 51/535 (9%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T ++F + NLARGLL IG+R GD + + A N +L ++ A A IG ++ +N +
Sbjct: 51 TYKEFDERTDNLARGLLAIGMRPGDHLGVWARNIPDWLTFMYATAKIGVVMVTVNPVYKS 110
Query: 94 KEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSL--RWHVSLGSSSSDFVNKRDMLT 150
E + S + V D D YL++ +P + L S + F+ +
Sbjct: 111 HELDYVLKQSDMKALCVIDAYRDVDYLKIIRDLVPETLTQQRGYLESENYPFLKNIIYMG 170
Query: 151 ADILKG-YSLRSLPFTHSWAPEGA-------------VIICFTSGTTGSPKGVVISHSAL 196
+ +G YS+ L S PE A V++ +TSGTTG PKGV+++H +
Sbjct: 171 PEKHRGCYSVPELVLLGSHVPEEALAEAETHFDNNDVVMMQYTSGTTGFPKGVMLTHRNI 230
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALEAV 255
+ G DD P H G + MA L + + + +F++ L+AV
Sbjct: 231 LNNGFYIGEGQKLGPDDRVTLPVPFFHCFGCVLGVMANLTHRSTMIIVEEFDAGLVLQAV 290
Query: 256 EQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAK 315
+ TS+ VP + +A L S++ + G P E M+E + +
Sbjct: 291 HKERATSVYGVPTMF--IAELNHPDFDTFDLSSLRTGIMAGSPCPPETMREVMDRMYMKE 348
Query: 316 LISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELK 375
+ YG+TETS T T D +E + T H P V V PA + +
Sbjct: 349 ITICYGLTETSPVFT-QTSADDDIEHKCE--------TVGRKHPPVDVRVIDPA---DGR 396
Query: 376 VCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRR 435
+C G G + +G +VM Y+ + +L +GD+G++D+ G + GR
Sbjct: 397 ICGPGEP--GELCCKGYNVMKGYYKMPEETARAIDADGYLHSGDLGTVDEDGYYRVTGRI 454
Query: 436 NGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNC 495
I GGENVYP EVE LL PG++ VVGI + +L E+V A VR+R ++
Sbjct: 455 KDMIIRGGENVYPLEVENFLLTMPGVLDAQVVGIPDPKLGELVGAFVRVRPGYE------ 508
Query: 496 DQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
D + + + R +K P+ V + FP+T + K+++ ++R
Sbjct: 509 DMTEDDVRAFAIPRIAR----------YKVPKR-VFFVDDFPMTPSMKVQKFKLR 552
>gi|423588594|ref|ZP_17564681.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD045]
gi|401226579|gb|EJR33119.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD045]
Length = 518
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/534 (25%), Positives = 238/534 (44%), Gaps = 54/534 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCHEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W + S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ +I + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVNI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV---------- 460
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 461 -------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|423548151|ref|ZP_17524509.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus HuB5-5]
gi|401176818|gb|EJQ84012.1| 2-succinylbenzoate-CoA ligase [Bacillus cereus HuB5-5]
Length = 481
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 248/527 (47%), Gaps = 84/527 (15%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T Q + V+++ L +G++ G VA+ N + I A++++G + LN R S
Sbjct: 29 TFMQLHEKVVSVCEHLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSR 88
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADI 153
+E + V LVTD+ + + T +P + A++
Sbjct: 89 EELLWQMDDAEVVCLVTDQ-------DFETTDVPVYSF-------------------AEV 122
Query: 154 LKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDD 213
+ G + ++ E A+ I +TSGTTG PKGV++++ ++ +G +DD
Sbjct: 123 MNGLKAEA-SIQEEFSLEEAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDD 181
Query: 214 VYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADL 273
+L P+ H+GGLS M +M G + +PK+++ EA++ VT + V ++ DL
Sbjct: 182 CWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDANFIHEALQTRGVTIISVVSKMLTDL 241
Query: 274 ATLIRV-KKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFM 332
L R+ ++T+ S++ +L GGG P L++ + YGMTETSS + +
Sbjct: 242 --LERLGEETYP--SSLRCMLLGGGPAPKPLLETCVEK--GIPVYQTYGMTETSSQICTL 295
Query: 333 TLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDG---SSHV-GRIL 388
+ D L G GKP +L++ DG H G I+
Sbjct: 296 SA-DYMLTKVGS--------------------AGKPLFQCQLRIEKDGVVVPPHAEGEIV 334
Query: 389 TRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVY 447
+G +V Y+++ A + ++ G WL TGD+G +D+ G ++++ RR+ I SGGEN+Y
Sbjct: 335 VKGPNVTGGYFNREDATRETIQNG--WLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIY 392
Query: 448 PEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW-QWSESNCDQSSKNKELLL 506
P ++E VLL HP + VVG+++ ESW Q + +S + +
Sbjct: 393 PAQIEEVLLSHPAVAEAGVVGMSD--------------ESWGQVPAAFVVKSGE-----V 433
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREV 553
+ E L C EK L +K P+ V + + P ++ K+ R E+R+ V
Sbjct: 434 TEEELLHFCEEK-LAKYKVPKK-VCFLEELPRNASKKLLRRELRQLV 478
>gi|296134001|ref|YP_003641248.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
gi|296032579|gb|ADG83347.1| AMP-dependent synthetase and ligase [Thermincola potens JR]
Length = 562
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 241/544 (44%), Gaps = 68/544 (12%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWS 92
T QF + A+G +++G++ GD VAI A N EW + AV +G ++ +N +
Sbjct: 44 TYAQFNEVCRLAAKGFMKLGIKKGDHVAIWATNVPEWVISQ-FAVGKMGAVLVTVNTNYK 102
Query: 93 FKEASRAIT-SIRPVMLVTDESSDSWYL----------------ELQHTAIPSLRWHVSL 135
E + S +++ D DS Y EL+ +P L+ + +
Sbjct: 103 VFELEYLLKQSDSTTLILIDGWRDSSYTGMITELCPELQECKPGELKSARLPLLKNVIYI 162
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTH-SWAPEGAVIICFTSGTTGSPKGVVISHS 194
G + + D + ++ K S L S P+ + + +TSGTTG PKGV+++H
Sbjct: 163 GENCPPGMISWDEM-MEMGKSVSDEELDARQRSLDPDDVINMQYTSGTTGFPKGVMLTHK 221
Query: 195 ALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSALE 253
++ ++A + + D PL H G + M ++ GA V + + L+
Sbjct: 222 NIVNNAIAVADCMNFSHKDRLCIPVPLFHCFGCVLGTMTCVVSGATMVPLVSYNPVQVLQ 281
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
+E+ T++ VP + L K S++ + G P E MK+
Sbjct: 282 TIEKERCTAVHGVPTMFIAELNLPNFDKY--DLSSLRTGIMAGSPCPIETMKQVMERMGM 339
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
++ YG TE S ++T + DP + + VG+ P VE
Sbjct: 340 KEVTITYGQTEASPAITMTRVDDPI--------------------ELRVTTVGRSIPGVE 379
Query: 374 LKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGG 427
+K+ + + G + RG +VM Y+ A + + WL TGD+ +D+ G
Sbjct: 380 VKIVNPETGEEVPRGVQGELCARGYNVMKGYYKMPEATHAAIDEDGWLHTGDLAVMDENG 439
Query: 428 NVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRES 487
+ GR I GGEN+YP E+E L HP I+ + VVG+ + + E V+A +RLRE
Sbjct: 440 YCKITGRVKDMIIRGGENIYPREIEEFLYTHPKILDVQVVGVPDVKYGEEVMAWIRLREG 499
Query: 488 WQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRD 547
+ +E E +R+ C+ + + +K PR ++ + + FP+T++GKI++
Sbjct: 500 VEMTE----------------EEVREFCKGR-IAQYKHPR-YIKFVEEFPMTASGKIQKY 541
Query: 548 EVRR 551
++R
Sbjct: 542 KLRE 545
>gi|441523245|ref|ZP_21004874.1| putative acyl-CoA synthetase [Gordonia sihwensis NBRC 108236]
gi|441457148|dbj|GAC62835.1| putative acyl-CoA synthetase [Gordonia sihwensis NBRC 108236]
Length = 518
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 250/548 (45%), Gaps = 60/548 (10%)
Query: 12 CLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYL 71
L R+ R +++ T T +Q LA L G+ GD VA+ LNS L
Sbjct: 10 TLHRVRHPHRVALIDATTGAEYTFEQLDLRTNALADALRSRGIGRGDRVALLTLNSTHML 69
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLR 130
E +LAVA +G + P+N+R E + S ++ V+ +++ + T + +
Sbjct: 70 EVVLAVAKLGAVAVPINWRLQAPEVQYILNDSGARLLFVSPQTAALARAAAEGTEVSGI- 128
Query: 131 WHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVV 190
V + S + A I +G R +P A + ++ +TSGTTG PKG +
Sbjct: 129 --VEIPSGEQRAAGEPSEYEALIAEGSDER-VPV--DVAADDLSMLMYTSGTTGFPKGAM 183
Query: 191 ISHSALIVQSLAKI-AIVGYGEDDVYLHTAPLCHIGGLSS-AMAMLMVGACHVFIPKFES 248
++H+ + + A G G DV + +APL HIG L + +L +G V + F
Sbjct: 184 LTHANHHWNGINNLTAGDGVGPRDVNIASAPLFHIGALGVITLPLLYIGGTTVVLETFTP 243
Query: 249 KSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEAT 308
+ L+AV +H V+ VPA+ A + V+ S++ ++GG P L++ T
Sbjct: 244 DAWLDAVAKHRVSVAFAVPAMWAAIDASPAVETA--DLSSLRFGISGGAPCPVVLIESLT 301
Query: 309 NSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
+L +G+TETS ++ + + D + G VGKP
Sbjct: 302 RH--GVRLCEGFGLTETSPNVCVLEV-DEAVAYAG--------------------SVGKP 338
Query: 369 APHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
HVE+KV +DG +G +L RG +V + YW++ A + + + W TGD+ +
Sbjct: 339 VLHVEMKV-ADGEGDEVPPGVIGELLVRGPNVFVGYWNKPEAT-AEALQDGWFHTGDLAT 396
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
D+ G +V R+ I +GGENVY EVE + +HP + + V+G+ + + E V A V
Sbjct: 397 CDEAGYYRIVDRKKDMIVTGGENVYASEVEQTMYRHPAVAEVAVIGLPDEKWGESVTAVV 456
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
+ + SE+ L RE+ + FK+PR V + P T+TG
Sbjct: 457 AAKPGSEVSEAE----------------LIAWTRER-IAHFKSPRA-VHFVDVLPRTATG 498
Query: 543 KIRRDEVR 550
K+ + E+R
Sbjct: 499 KVLKRELR 506
>gi|378951790|ref|YP_005209278.1| acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
gi|359761804|gb|AEV63883.1| Acetoacetyl-CoA synthetase / Long-chain-fatty-acid--CoA ligase
[Pseudomonas fluorescens F113]
Length = 565
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 233/551 (42%), Gaps = 64/551 (11%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLN--YRW 91
T QQ + V AR LL +GL+SGD + + A N + A A IG I+ +N YR
Sbjct: 53 TWQQLAEAVDLHARALLALGLKSGDRLGVWAPNCAQWCISQFASAKIGVILVNINPAYRV 112
Query: 92 SFKE-------------ASRAITSIRPVML--VTDESSDSWYLELQHTAIPSLRWHVSLG 136
S E A TS ML + E ++ LQ +P LR +SL
Sbjct: 113 SELEYVLKQSGCQWLVCAGSFKTSNYHAMLQALAPELAEQSIGHLQSERLPDLRGVISLD 172
Query: 137 SSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSAL 196
S L A + S + V I +TSGTTG PKG +SH +
Sbjct: 173 SQPPAGFLPWSQLAALGASVTPAQLAERQSSLQSDQPVNIQYTSGTTGFPKGATLSHHNI 232
Query: 197 IVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPK--FESKSALEA 254
+ +G DD + PL H G+ M + P F+ L+A
Sbjct: 233 LNNGYMVGESLGLTADDRLVIPVPLYHCFGMVMGNLGCMTHGSTMIYPNDAFDPLLTLKA 292
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
V + T+L VP + +A L + ++ S++ + G P E+M+ N A
Sbjct: 293 VAEEKATALYGVPTMF--IALLDQPQRGDFDVSSLRTGIMAGATCPIEVMRRVINEMHMA 350
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
++ AYGMTETS +L+T P+ + + VG+ P +E
Sbjct: 351 EVQIAYGMTETSPV---------SLQT-----------GPSDELELRVTTVGRTQPQLES 390
Query: 375 KVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNV 429
K+ + + VG + TRG VML YW+ + W+ TGD+ ++D+ G V
Sbjct: 391 KIIDEAGNIVSRGAVGELCTRGYSVMLGYWNNPKGTTDAIDPDGWMHTGDLATMDEQGYV 450
Query: 430 WLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQ 489
+VGR I GGEN+YP E+E HP + + V+GI +R E ++A ++
Sbjct: 451 RIVGRNKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGIPCSRYGEEIIAWIKFHPGHS 510
Query: 490 WSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
SE L+ C+E+ + FK PR F + FP+T TGKI++ +
Sbjct: 511 ASEQE----------------LQAWCKER-IAHFKTPRHFKFVEE-FPMTVTGKIQKFRM 552
Query: 550 RREVMSHLKSL 560
R + L+ +
Sbjct: 553 REISIEELREV 563
>gi|399022746|ref|ZP_10724815.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
gi|398084166|gb|EJL74862.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Chryseobacterium sp. CF314]
Length = 539
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 250/557 (44%), Gaps = 76/557 (13%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWIL---AV 77
+ +++++ N T ++F +A+ L+ +G SGD + I + N EW+L A
Sbjct: 33 QKALISVHQNYRATYREFYNQTTAVAKALIHLGANSGDRIGIWSSNR---YEWVLLQYAT 89
Query: 78 AFIGGIVAPLNYRWSFKEASRAI--TSIRPVM--LVTDESSDSWYLELQHTAIPSLRWHV 133
A IG I+ +N + E + + + IR + L S+ +E P+L +
Sbjct: 90 ARIGTILVNINPAYRTHELTYVLNQSEIRFIFSSLYFKNSNYKEMVEYAKEVCPNLEEEI 149
Query: 134 SLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISH 193
+ F+ + + ++L + + F + V I +TSGTTG PKGV +SH
Sbjct: 150 FFDDNWERFLKNGEHIPDELLHSIEDK-VDF------DDPVNIQYTSGTTGFPKGVTLSH 202
Query: 194 SALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMV-GACHVFIPK--FESKS 250
++ + Y E D P H G+ V GAC + IP F+
Sbjct: 203 HNILNNGYFIGIRLNYTEKDRVCIPVPFYHCFGMVIGNICCTVHGAC-IVIPNDSFDPDI 261
Query: 251 ALEAVEQHCVTSLITVPAI-MADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEA 307
L+ V TSL VP + +A+LA K ++ D S++ + G P E+MK+
Sbjct: 262 TLKVVSDEKCTSLYGVPTMFIAELAV-----KDFETYDFSSLRTGVMAGSVCPPEIMKKV 316
Query: 308 TNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGK 367
N ++ YGMTETS T TL +LE Q VG
Sbjct: 317 ENLMNIKEMSICYGMTETSPVST-QTLIGTSLEK-------------------QVSTVGT 356
Query: 368 PAPHVELKVCSDGSSHV-----GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
H+E+K+ ++ V G + TRG VML+YW+ V W+ TGD+
Sbjct: 357 VQDHLEIKIINENGKVVNRGEHGELCTRGYSVMLKYWNDPENTGKVLDDARWMHTGDLAV 416
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+DD G + + GR I GGEN+ P+E+E L + I+ + ++G+ + + E V+A V
Sbjct: 417 MDDEGYITISGRIKDLIIRGGENISPKEIEDFLYTYRNILDVQIIGVPSEKFGEEVMAWV 476
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWR--KPFPLTS 540
++R+ ++ +E+ ELL +C+ + + +K P+ W+ FP+T
Sbjct: 477 KIRKGFEITEN---------ELL-------DYCKGR-IAHYKVPK---YWKFVDEFPMTI 516
Query: 541 TGKIRRDEVRREVMSHL 557
+GKIR+ E+R M L
Sbjct: 517 SGKIRKVEMREISMKEL 533
>gi|229011260|ref|ZP_04168453.1| Feruloyl-CoA synthetase [Bacillus mycoides DSM 2048]
gi|228750143|gb|EEL99975.1| Feruloyl-CoA synthetase [Bacillus mycoides DSM 2048]
Length = 496
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 143/553 (25%), Positives = 246/553 (44%), Gaps = 73/553 (13%)
Query: 13 LSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLL-EIGLRSGDIVAISALNSEWYL 71
+ + A + + + IT T +Q + V +A L+ ++ ++ G+ +AI + N Y+
Sbjct: 8 IEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYDLNVQKGERIAILSQNCLEYI 67
Query: 72 EWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+ A+A + I PLN R + E + +L +E+ + L +Q+ + ++
Sbjct: 68 VLLFAIAKVECIAVPLNIRLTENELIFQLKDSGATVLFVEETFQNMALSMQN--VTYVQR 125
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVI 191
+S+ S LK R + + IIC+TSGTTG PKG V+
Sbjct: 126 VISIKS----------------LKEIEDRKIDNFEEINESASFIICYTSGTTGQPKGAVL 169
Query: 192 SHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKS 250
+ + +L + D + PL HIGG+ A L G + KFE
Sbjct: 170 TQENMFWNALNNTFAIDLTVHDRSIVLLPLFHIGGIGLFAFPTLFAGGIIIVPRKFEPTI 229
Query: 251 ALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNS 310
AL +E++ VT ++ VP I L + + T SV+ NGG P ELM+E +
Sbjct: 230 ALSMIEKYKVTVVMGVPTIHQALINCAKFETT--NLQSVRWFYNGGAPCPEELMREFID- 286
Query: 311 FPKAKLI-SAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPA 369
+ L +GMTETS ++ ++ D + +GKP
Sbjct: 287 --RGFLFGQGFGMTETSPTVFMLSEEDARRKVGS---------------------IGKPV 323
Query: 370 PHVELKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSI 423
+ + + + VG +L RG +VM YW++ A + ++ G WL TGD+ +
Sbjct: 324 LFCDYVLIDENKNKVEIGEVGELLIRGPNVMKGYWNRPDATEETIQDG--WLYTGDLAKV 381
Query: 424 DDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVR 483
D+ G V++VGR+ I SGGEN+YP EVE V+ + + + V+G + + E+ +A +
Sbjct: 382 DEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSEVCEVAVIGTQHVKWGEIPIAFI- 440
Query: 484 LRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGK 543
K+ +L EV+ HCR L +K P+ V + P +TGK
Sbjct: 441 --------------VKKSCSVLTEKEVI-DHCR-LLLAKYKVPKEIVFLEE-LPKNATGK 483
Query: 544 IRRDEVRREVMSH 556
I++ ++ ++ S
Sbjct: 484 IQKAQLANQLKSR 496
>gi|111019649|ref|YP_702621.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110819179|gb|ABG94463.1| possible long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 517
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 228/524 (43%), Gaps = 57/524 (10%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T QQ V A +GL GD VA N LE LA A G + A LNYR +
Sbjct: 33 TWQQLSDRVRRNAAAQSALGLAPGDRVAFLDKNHPASLETTLACALAGTVNAVLNYRLAP 92
Query: 94 KEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSL---RWHVSLGSSSSDFVNKRDMLT 150
E + I R +L+ ++++ P+L R + LG
Sbjct: 93 SELAYVINDSRAELLILGAE----FVDVVDAIKPNLDHVRTIIVLGGE------------ 136
Query: 151 ADILKGYSLRSLP--FTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVG 208
AD + + ++ P H PE + +TSGTTG PKG +++H ++ S+A A G
Sbjct: 137 ADEYEAWLGKAPPREIAHPAHPEDCFLQLYTSGTTGHPKGAMLTHRSVGAHSIAASAAFG 196
Query: 209 YGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPA 268
+ D V + PL H+GG S A+A + GA + + + L+ + + VT VPA
Sbjct: 197 FARDSVNMVAMPLFHVGGTSWALAAMSQGAETILVREVVPAVVLDQITRQSVTHAFFVPA 256
Query: 269 IMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETS 326
++ + V RD S++ + GG +P L++EA ++F + YGMTE S
Sbjct: 257 VIRFFLQVPGV----SARDFRSLRCLGYGGSPMPEALLREAMSTF-EVDFYQVYGMTEAS 311
Query: 327 SSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHVGR 386
+ D +L +A G + V V PA EL S VG
Sbjct: 312 GVFCVLGPQDHRDPARPELLRAAGRPVEGA-----EVRVVDPATGDELP-----SGEVGE 361
Query: 387 ILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENV 446
RG VM YW + + GE W TGD G D G ++ R I SGGEN+
Sbjct: 362 FQIRGPQVMAGYWQREADTAASFDGE-WFRTGDAGRRDPDGFFFVEDRVKDVIISGGENI 420
Query: 447 YPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLL 506
YP EVE V+ + P + + V+G+ + + E+V A V + S ++ D+ NK L
Sbjct: 421 YPAEVERVVSEFPDVAEVAVIGVPDDKWGEVVRAVVVAK-----SGADIDE---NKLLDF 472
Query: 507 SSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
+ +L G+K PR + P +TGKI + ++R
Sbjct: 473 CA---------AHLAGYKRPRTIDIVTS-LPRNATGKILKRDLR 506
>gi|296164097|ref|ZP_06846716.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900537|gb|EFG79924.1| acyl-CoA synthetase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 515
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 159/543 (29%), Positives = 233/543 (42%), Gaps = 81/543 (14%)
Query: 27 ITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAP 86
+ NR T Q + LAR L +G+R GD V +NS ++E +LA A +G I P
Sbjct: 23 VDDNRRITFTQLDERTNRLARALRALGVRKGDRVGGLLINSPAFIETMLAAAKLGAIFVP 82
Query: 87 LNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKR 146
+N R + E + + D +D L + P R VS D V R
Sbjct: 83 MNVRLAPAEVAYQLA---------DSGAD--VLVYSNPLAPVARAAVS-----EDGVRVR 126
Query: 147 DMLT--ADILKGYSLRSLPFTHSWAPEGA---------VIICFTSGTTGSPKGVVISHSA 195
+ + L G L +S AP + +TSGTTG PKGV+++H
Sbjct: 127 HQMAVGGECLAG-ELSYDDVVNSEAPTAVGSDVAGHDIANLMYTSGTTGRPKGVMLTHDN 185
Query: 196 LIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKFESKSALE 253
+ + + I G E DV + AP+ HIGGL + +L VG C V +P F+ + L
Sbjct: 186 HLWNVMNALTIGRGLRETDVTVAVAPMFHIGGLGVHTLPLLHVGGCSVLLPSFDPRQTLA 245
Query: 254 AVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPK 313
+ Q T VPA+ A L + ++ D L GG P L
Sbjct: 246 MMAQEHATVQFMVPAMWAALMNV----DGFEDHDLSALELAAAGGAPCPLTVIEFFQGRS 301
Query: 314 AKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVE 373
+GMTET+ ++F+ V + G +G+ A HVE
Sbjct: 302 LPFQEGFGMTETAPIVSFLD--------------------AEHVKEKAG-SIGRTAFHVE 340
Query: 374 LKVCSDGSS-----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGN 428
++ D + VG ++ RG +V YW A G W TGD+G ID G
Sbjct: 341 ARIVDDADNDVPVDEVGELVVRGPNVFAGYWGLPEATVQAFRGG-WFHTGDLGRIDREGF 399
Query: 429 VWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESW 488
+ LV R+ I SGGENVYP EVE VL +H + + VVG+ + R E VA V L++
Sbjct: 400 ITLVDRKKDMIISGGENVYPIEVEQVLYRHHAVREVAVVGVPHPRWGETPVAVVALQQ-- 457
Query: 489 QWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP-RLFVLWRKPFPLTSTGKIRRD 547
+ +++E L + RE+ L FK P R+ V+ P +TGK+ +
Sbjct: 458 --------------DAAVNAEELIDYARER-LAHFKCPSRVHVV--PDLPRNATGKVLKT 500
Query: 548 EVR 550
E+R
Sbjct: 501 ELR 503
>gi|212638029|ref|YP_002314549.1| AMP-binding domain-containing protein [Anoxybacillus flavithermus
WK1]
gi|212559509|gb|ACJ32564.1| Acyl-CoA synthetase/AMP-acid ligase II [Anoxybacillus flavithermus
WK1]
Length = 546
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 237/549 (43%), Gaps = 82/549 (14%)
Query: 36 QQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKE 95
+QF +A+GL+++G+ +G+ +AI A N +L A +G ++ +N + E
Sbjct: 35 RQFNDYCRLVAKGLMKLGIEAGEHMAIWATNKPEWLACQFATGKMGAVLVTVNTNYRTAE 94
Query: 96 ASRAIT-SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTADIL 154
+ S +++ ++ D+ Y+++ + P L + + R+++
Sbjct: 95 LEYLLKQSDATTIILMEQYRDASYIDMIYEIAPELAYCEPGKLQAKRLPQLRNVIVL--- 151
Query: 155 KGYSLRSLPFTHSW----------------------APEGAVIICFTSGTTGSPKGVVIS 192
S + P T SW P + + +TSGTTG PKGV+++
Sbjct: 152 ---SEQRYPGTFSWHDLLAMAEYVEDAALDARMNSLDPHDVINMQYTSGTTGFPKGVMLT 208
Query: 193 HSALIVQSLAKIAIVGYGEDDVYLHTAPLCH-IGGLSSAMAMLMVGACHVFIPKFESKSA 251
H ++ + + ++D P H G + +A + VGA V + +F K
Sbjct: 209 HYNIVNNAYYIAECMKLTKEDRLCIPVPFFHCFGCVLGTLACVTVGATMVPLEQFHPKQV 268
Query: 252 LEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSF 311
L+ V+ T+L VP + +A L S++ + G P E+MK
Sbjct: 269 LQTVQDEKCTALHGVPTMF--IAELNDPDFASYDLSSLRTGIMAGSNCPIEVMKAVIEKM 326
Query: 312 PKAKLISAYGMTETSSSLTFMTLYDPT---LETPGQLPQAFGNVTPNSVHQPQGVCVGKP 368
++ AYG TE+S +T DP +ET VG+
Sbjct: 327 GAKEITIAYGQTESSPVITQTRTDDPIELRVET-----------------------VGRA 363
Query: 369 APHVELKVCSDGSSH------VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGS 422
PHVE+K+ ++ G + TRG HVM Y++ A E WL TGD+
Sbjct: 364 LPHVEVKIVDPVTNQEVPPGVQGELCTRGYHVMKGYYNNPSATQEAIDEEGWLHTGDLAV 423
Query: 423 IDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACV 482
+D+ G + GR I GGEN+YP E+E L +HP ++ + VVG+ + E V+A +
Sbjct: 424 MDENGYCRITGRLKDMIIRGGENIYPREIEEFLYKHPKVLDVQVVGVPDETYGEEVMAWI 483
Query: 483 RLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTG 542
L+E + E +R C E +++ K PR ++ + +P+T++G
Sbjct: 484 ILKEGEH----------------ATPEDIRSFC-EGHISRHKIPR-YIEFTTAYPMTASG 525
Query: 543 KIRRDEVRR 551
KI++ ++R
Sbjct: 526 KIQKFKLRE 534
>gi|398866260|ref|ZP_10621759.1| O-succinylbenzoate-CoA ligase [Pseudomonas sp. GM78]
gi|398241311|gb|EJN26965.1| O-succinylbenzoate-CoA ligase [Pseudomonas sp. GM78]
Length = 500
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 231/482 (47%), Gaps = 43/482 (8%)
Query: 8 HICQCLSRIAAV--KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
H+ + L++ AA+ R ++V+ TG T QF LA LL G+ GD VA+ +
Sbjct: 4 HLGRLLAQRAALTPDREALVSPTGRW--TFAQFDARCNRLANYLLAQGVAEGDRVAVYSK 61
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQH-- 123
NSE+ + AVA +G + LN+R E S + P L+ + D + ++H
Sbjct: 62 NSEFLSCALFAVAKVGATLVVLNWRLQAPELSYILADSEPAALLFE---DVFAPTVRHLV 118
Query: 124 TAIPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTT 183
T P L + + + + + +TAD SL + P + +I +TSGTT
Sbjct: 119 TDRPGL---ILINTGTEQAPGPYERITADT----SLDA-PLLLGSGGDAPAVIMYTSGTT 170
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFI 243
G PKG ++SH+ALI + + A + + +D +L AP+ HIGGLS + + G V +
Sbjct: 171 GKPKGAMLSHAALIWTAQSNSATLEWNQDHRFLLIAPMFHIGGLSPMLTNVFKGCTTVLL 230
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSEL 303
P F+ E + + +TSL+TVP ++ L L K S+ + G +P L
Sbjct: 231 PDFDPTQVWEMIARERITSLMTVPVMLQALLAL--AKNQAVDSSSLVSVTCGASAVPYRL 288
Query: 304 MKEATNSFPKAKLISAYGMTETSSSLTFMT--LYDPTLETPGQLPQAFGNVTPNSVHQPQ 361
+++ K + + YG+TE ++TF T + + G++ FG V + P
Sbjct: 289 IEDCLAIGVKVQQV--YGITEFCGAVTFWTHEMGLAHAHSHGKV-LMFGEV---RIVDP- 341
Query: 362 GVCVGKP-APHVELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
C +P AP +E G + RG + YW A V+ + W TGDI
Sbjct: 342 --CSLEPLAPGLE-----------GEVWCRGPMMFSGYWRNPQAT-QVAIQKGWYRTGDI 387
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
G ID+ G + +V R I SGGEN+YP E+EAV+ PG+ + VVG + R E+ VA
Sbjct: 388 GRIDEHGFLHVVDRLKDMIISGGENIYPAELEAVIASLPGVAEVAVVGQPDERWGEVPVA 447
Query: 481 CV 482
V
Sbjct: 448 FV 449
>gi|255659858|ref|ZP_05405267.1| long-chain-fatty-acid--CoA ligase [Mitsuokella multacida DSM 20544]
gi|260847936|gb|EEX67943.1| long-chain-fatty-acid--CoA ligase [Mitsuokella multacida DSM 20544]
Length = 495
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 244/554 (44%), Gaps = 92/554 (16%)
Query: 20 KRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAF 79
K +S+ + R T ++ Q V L G+R GD V+I + NS Y+ +A+
Sbjct: 11 KPDSLAIVDHERRITYRELQQHVAACRDRLYAAGVRVGDRVSIFSRNSADYVYAYMAIVS 70
Query: 80 IGGIVAPLNYRWSFKE--------ASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRW 131
+G I P+N++ S +E SR I + +P+ LV A+ +LR
Sbjct: 71 LGAIAVPINFQLSSREIAYIIKDSGSRHILTYQPLNLVD--------------ALSTLRC 116
Query: 132 HVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAP----EGAVIICFTSGTTGSPK 187
+ + + K+D SLP + P + +I +TSGTTGSPK
Sbjct: 117 DMRVTQHDIRQMGKKD------------ESLPAAPTLPPTFDEQNPCVIIYTSGTTGSPK 164
Query: 188 GVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFIPKF 246
G V+SH LI + +++I+G + L P+ H G + S + L GA V + F
Sbjct: 165 GAVLSHRNLITNA-DQMSIMGCKAEHHVLCVLPMYHCFGWTCSVLYPLYCGAEVVILDSF 223
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
K + + + + L VP+I + L L + + S++ +++GG LP ++ ++
Sbjct: 224 TPKETISVIREEKINDLYIVPSICSLLTKL----ASKEDMASLRLVVSGGTTLPLQIEQD 279
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
N F + YG++ETS +T P + P+ G C G
Sbjct: 280 FMNKF-GVDICEGYGLSETSPVVTM---------NPPEKPKV-------------GSC-G 315
Query: 367 KPAPHVELKVC-SDGSS----HVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIG 421
P + K+ +DG G + +G ++ML YW+ A + G WL TGD+
Sbjct: 316 PVVPGIAWKLIDADGKEVPKGEAGEFIVKGDNIMLGYWNLPDATKNALRGG-WLHTGDVA 374
Query: 422 SIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVAC 481
D+ G +++V R I S GEN+YP EVE ++ Q PGI VVGI + +L AC
Sbjct: 375 RADEEGYIYIVDRLKDMIISMGENIYPREVEELIYQFPGISEAAVVGI-DDKLRGQAGAC 433
Query: 482 VRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTST 541
+ E + K+ L + NL +K PR F + P TST
Sbjct: 434 F-----YSLHEGASINIRELKKFL-----------QANLALYKIPREFHELQS-LPRTST 476
Query: 542 GKIRRDEVRREVMS 555
GKI + ++ R+ ++
Sbjct: 477 GKIAKRQILRDFLA 490
>gi|409391789|ref|ZP_11243447.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
gi|403198390|dbj|GAB86681.1| putative acid--CoA ligase [Gordonia rubripertincta NBRC 101908]
Length = 503
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 188/385 (48%), Gaps = 39/385 (10%)
Query: 170 PEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSS 229
P+ II FTSGTT +PKGV++ HS L+ ++ + E D L + P H+ G+ +
Sbjct: 140 PDDPAIILFTSGTTSAPKGVILRHSHLLSYVMSTVEYGSAAETDGALISVPPYHVAGMGT 199
Query: 230 AMAMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSV 289
+ + G +++P F++++ +E V + TS + VP ++ + ++ ++ ++
Sbjct: 200 ILTNIYAGRRLIYLPNFDARAWVELVRREGATSAMVVPTMLDRIVDVLAGERA--DVPTL 257
Query: 290 KKILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAF 349
+ + GG +P ++ A +FP+A ++AYG+TETSS++ + P A
Sbjct: 258 RSLSYGGARMPRPTLEAALRAFPEAGFVNAYGLTETSSTIALL--------GPEDHRAAL 309
Query: 350 GNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSHVGRILTRGAHVMLRYWDQFLA 404
+ P V Q + +G+P P +E+++ S S G + RG V +++
Sbjct: 310 DSDDP--VVQARLGSIGRPVPGIEIQLRSPEGLPVASGEQGELWVRGPQVS----GEYMG 363
Query: 405 KPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGI 464
SV E W T D+ D G +++VGR + I GGEN+ P E+E VL+ HP + +
Sbjct: 364 AGSVLDAEGWFPTKDLAYTDTEGFLYIVGRNDDTIIRGGENIAPAEIEDVLVHHPMVRSV 423
Query: 465 VVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFK 524
VVVGI + E + A V + + E LR + RE+ L G +
Sbjct: 424 VVVGIPDDHWGEAIAAAVVVEPGMS----------------VDPEELRTYVRER-LRGSR 466
Query: 525 APRLFVLWRKPFPLTSTGKIRRDEV 549
P V++ P T+TGKI R +V
Sbjct: 467 TPDR-VIFLDDLPATATGKILRKDV 490
>gi|121609209|ref|YP_997016.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
gi|121553849|gb|ABM57998.1| AMP-dependent synthetase and ligase [Verminephrobacter eiseniae
EF01-2]
Length = 538
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 242/532 (45%), Gaps = 62/532 (11%)
Query: 42 VLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAIT 101
V A+ L +G+R D VAI SE +A +G I P+N+R S EA+ +
Sbjct: 37 VRRFAQALFNLGVRQMDRVAILQKTSEATPTAYMACQLLGAIAVPMNHRLSPDEAAYILR 96
Query: 102 SIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVN----------------- 144
++ D++ ++ A+P LR + + S++SD +
Sbjct: 97 DAGARAVIYDDAMLPLMGKMV-LALPDLRTFIRVRSAASDVSDVSGASGASGASGAPDAP 155
Query: 145 ---KRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSL 201
K ++ G + P A + + I+ +TSGTTG PKG + +H + +
Sbjct: 156 GLPKHHHCFEALIDGATRLDAPLPQPGAEDISAIV-YTSGTTGRPKGAIHTHGNDVAIAT 214
Query: 202 AKIAIVGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPKFESKSALEAVEQHCV 260
+ DV LH APL H+GG+ + + ++VGA +V +P++ + + LEA+ +H V
Sbjct: 215 NCVMEYSLTCTDVALHIAPLYHVGGMQAYFLPHMVVGAANVILPRYTALTTLEAIARHRV 274
Query: 261 TSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAY 320
T+L VP + D+ L S++ I GG + + M+ + F ++ + Y
Sbjct: 275 TTLFAVPTQIQDM--LFHPDFAAMDVSSLRMITTGGAAIAAATMQRVIHEF-CPRVFNGY 331
Query: 321 GMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD- 379
GMTE S +L L P G+ ++ V P E +V +
Sbjct: 332 GMTEASLTL---------LLHPRDALAHLGSCGKPTLISTCRVIRNDP----ERRVAASE 378
Query: 380 --GSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNG 437
+ VG+++ RG ++ RYW+ A+ + WL TGD+ S+DD G GR +
Sbjct: 379 TLAAGEVGQLIVRGPQLVARYWND-PAETEKKFRDGWLYTGDLFSVDDAGYFHFHGRADD 437
Query: 438 RIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQ 497
I SGGEN+YP E+E VL PG+ V+G+ + + + V A V +S+ D
Sbjct: 438 MIVSGGENIYPREIEEVLYHCPGVQEAAVIGLPDPKWGQAVTAFV--------VKSDID- 488
Query: 498 SSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEV 549
LL++EV+ C+ +LT +K P+ V + P +GKI R E+
Sbjct: 489 -------LLAAEVI-AFCK-ASLTSYKCPKQ-VFFLDQLPRNPSGKILRREL 530
>gi|13475770|ref|NP_107337.1| AMP-binding protein [Mesorhizobium loti MAFF303099]
gi|14026526|dbj|BAB53123.1| long chain fatty acid acyl-CoA ligase [Mesorhizobium loti
MAFF303099]
Length = 590
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 249/569 (43%), Gaps = 80/569 (14%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+++ V + ++ T + V LA G L +GL GD V I + N +L A A I
Sbjct: 62 QDAAVFVGQDKRFTWSELSDTVDALAAGFLALGLEKGDRVGIWSPNRWEWLVTQFATARI 121
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDES-SDSWYL----------------ELQH 123
G I+ +N + E A+ + LVT S S YL +L+
Sbjct: 122 GLILVNINPAYRLTELEYALNKVGCKALVTAASFKTSDYLGMIETLAPEIAKATPGKLKA 181
Query: 124 TAIPSLRWHVSLGSSSS-DFVNKRDMLT-ADILKGYSLRSLPFTHSWAPEGAVIICFTSG 181
+P+L+ + +G +S N D+L A + SL + + P A+ I FTSG
Sbjct: 182 QKLPALKIVIRMGEDNSPGMFNFADVLAMAGRDEHDSLDRI--SEGLKPGDAINIQFTSG 239
Query: 182 TTGSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACH 240
TTG+PKG ++H ++ + + DD PL H G+S M + GA
Sbjct: 240 TTGAPKGATLTHHNIVNNGNFVTSAIKLTVDDRLCIPVPLYHCFGMSMGTMGCVTKGATM 299
Query: 241 VFIPK-FESKSALEAVEQHCVTSLITVPAIM------ADLATLIRVKKTWKGRDSVKKIL 293
VF + F+ + L+AV Q T L VP + AD AT S++ +
Sbjct: 300 VFPGEGFDPGATLKAVAQERCTGLYGVPTMFVGMLDHADFATF--------DLSSLRTGI 351
Query: 294 NGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVT 353
G P E+MK+ + +++ AYGMTETS ++F + D LE
Sbjct: 352 MAGSPCPIEVMKKVVSLMHMSEVTIAYGMTETSP-VSFQSGVDDPLEK------------ 398
Query: 354 PNSVHQPQGVCVGKPAPHVELK-VCSDGSSHV----GRILTRGAHVMLRYWDQFLAKPSV 408
+ VG+ PHVE+K + +DG++ G + TRG VM YWD
Sbjct: 399 -------RVSTVGRIHPHVEVKAIDADGATVAVGAPGELCTRGYSVMKGYWDDAEKTREA 451
Query: 409 STGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVG 468
+ W+ TGD+ +ID G +VGR + GGENVYP EVE L +HP + + V G
Sbjct: 452 IDSDGWMHTGDLATIDAEGYCNIVGRVKDMVIRGGENVYPREVEEFLYRHPKVREVQVFG 511
Query: 469 IANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRL 528
I +A+ E + A + L+ +E ++ C + +K PR
Sbjct: 512 IPDAKYGEELCAWIVLKPGQIATEQE----------------IKTFC-AGQIAHYKIPR- 553
Query: 529 FVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
+ +R P+T TGK ++ +R+ ++ L
Sbjct: 554 HIRFRTELPMTVTGKPQKFLMRQAMVEEL 582
>gi|423556240|ref|ZP_17532543.1| hypothetical protein II3_01445 [Bacillus cereus MC67]
gi|401195429|gb|EJR02385.1| hypothetical protein II3_01445 [Bacillus cereus MC67]
Length = 518
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 241/535 (45%), Gaps = 56/535 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDCVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVTMIERDFPNSSFWYVEDDAPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI+ + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASAEKVDIV----VDEMDYCS---------MLYTSGTTGHPKGVLHRHRD 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MAEHSMICTYFIKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ +T+ P + L ++K D S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWNML-----LQKDLDEYDLTSMKIGVYGGAAMAPALVKECKERL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 300 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDAPAE 352
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
+ VG I+ RG +M Y ++ A S + W +GD+G D G +++
Sbjct: 353 PDDMLP--PYEVGEIILRGPTMMAGYHNREEANAK-SMYKGWYHSGDLGYFDKDGYLFVA 409
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R + + SGG N+YP EVE L HPG++ + V+G + E VVA V +++ SE
Sbjct: 410 DRVDDMVISGGVNIYPREVEDFLHSHPGVLDVAVLGEPDELWGERVVAVV-VKKDENISE 468
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 469 AD----------------LEMYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|264677860|ref|YP_003277766.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262208372|gb|ACY32470.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 513
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 242/555 (43%), Gaps = 66/555 (11%)
Query: 9 ICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNS- 67
+ Q L++ A + I R + QQ A L +GLR GD + I N
Sbjct: 10 VAQALAQTVAAHPDRTAYIDQGRSYSWQQVDVMAGAWAAHLSSLGLRPGDRIGIILPNGL 69
Query: 68 EWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIP 127
W L + LA A G +V L+ R+ E ++ D + L
Sbjct: 70 PWVLSY-LAAAKTGLVVVGLSVRYRDTELD---------FMLQDSQVKA---VLAPCEFA 116
Query: 128 SLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRS----LPFTHSWAPEGAVIICFTSGTT 183
+ +L + F +L D +LRS L AP+ ++I +TSGTT
Sbjct: 117 GFDYQNTLAQARRRFAALEHLLWVDEGFEQALRSGAKALHEGDGPAPDDLLMIIYTSGTT 176
Query: 184 GSPKGVVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVF 242
G PK ++H + + +LA+ A V +D+ PL H+GG++ + ML+ G C
Sbjct: 177 GRPKAAGLTHRSQLGSALAQHAHVKAAAEDMVQLAMPLNHVGGITCGVLTMLLAGGCCEL 236
Query: 243 IPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSE 302
+P F ++ L ++H T L+ VP ++ L + + R ++ I+ GG +
Sbjct: 237 VPMFSPEALLRMAQKHPPTWLVGVPTMLTLLLMHPLLAEVDMSR--LRLIVVGGSNVEPV 294
Query: 303 LMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQG 362
L++ FP +++ YG++ETS ++ TP Q Q Q
Sbjct: 295 LLQRLQQQFPGVNIMNLYGLSETSGAIAM---------TPWQADQ-----------QALL 334
Query: 363 VCVGKPAPHVELKVC-SDG----SSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDT 417
+GKP +L+V +DG S VG + RGA V+ Y Q + + G WL +
Sbjct: 335 HSIGKPLQGAQLRVAGADGEELRSGEVGELWFRGAGVIPAYVGQQQDEEVFAGG--WLHS 392
Query: 418 GDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEM 477
GD+G +D+ G + L GR+ GG NVYP EVE V+ H G++ + +G+ + L E+
Sbjct: 393 GDLGFVDEQGLIHLKGRQKDMFIQGGFNVYPSEVEGVIAGHAGVLMVAGIGVPDPVLGEV 452
Query: 478 VVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFP 537
+ +R SE E L HCR++ L +K PR V +R P
Sbjct: 453 GRYYIVIRPGASVSE----------------EELLTHCRQQ-LADYKLPRQLV-FRTELP 494
Query: 538 LTSTGKIRRDEVRRE 552
LT GKI++ +R E
Sbjct: 495 LTPAGKIQKALLRAE 509
>gi|42780041|ref|NP_977288.1| long-chain-fatty-acid--CoA ligase [Bacillus cereus ATCC 10987]
gi|42735959|gb|AAS39896.1| AMP-binding protein [Bacillus cereus ATCC 10987]
Length = 518
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 239/535 (44%), Gaps = 56/535 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ + ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVEPTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ DI G + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSKKVDIEIG----EMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D + L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSIGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRD--SVKKILNGGGGLPSELMKEATNSFP 312
+++ +T+ P + L ++K D S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWNML-----LQKDLAKYDLTSMKIGIYGGAAMAPALVKECKERL- 299
Query: 313 KAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHV 372
L+ YGMTE + F+ D Q+ +A TP H+ + V + P
Sbjct: 300 YIDLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPNEDVPAE 352
Query: 373 ELKVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLV 432
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++
Sbjct: 353 PDDVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVA 409
Query: 433 GRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSE 492
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA V
Sbjct: 410 DRVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVV---------- 459
Query: 493 SNCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K E + ++ L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 460 ------VKKDETITEAD-LETYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|423461139|ref|ZP_17437936.1| hypothetical protein IEI_04279 [Bacillus cereus BAG5X2-1]
gi|401137793|gb|EJQ45370.1| hypothetical protein IEI_04279 [Bacillus cereus BAG5X2-1]
Length = 518
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 236/533 (44%), Gaps = 52/533 (9%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A+ LL+ G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAQALLKEGVRKGDTVSVYLYNCREFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ S W+V S
Sbjct: 79 GAIFNPINFRLKAKELSYILQDAASKVVVFEKAVESTVAIIERDFPNSSFWYVEDDTPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN DI + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNVASSEKIDI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D L APL H G L++ + + VG +V + F++ L
Sbjct: 186 MTEHSMICTYFLKYNRDSAGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTDRVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ T S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLTQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEIRIVKPSDDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGR 434
V VG I+ RG +M Y ++ A + S + W +GD+G D G +++ R
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEAN-AKSMYKGWYHSGDLGYFDKDGYLFVADR 411
Query: 435 RNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESN 494
+ + SGG N+YP E+E L HPG++ + V+G + E VVA V
Sbjct: 412 VDDMVISGGVNIYPREIEDFLHSHPGVLDVAVLGEPDELWGERVVAVV------------ 459
Query: 495 CDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRR 546
K+ ++ E L +C+E + L +K PR + L+ P ++GK+++
Sbjct: 460 -----VKKDETITEEGLEIYCKESDELADYKRPRHY-LFVDELPRNASGKLQK 506
>gi|289706149|ref|ZP_06502518.1| AMP-binding domain protein [Micrococcus luteus SK58]
gi|289557128|gb|EFD50450.1| AMP-binding domain protein [Micrococcus luteus SK58]
Length = 611
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 240/552 (43%), Gaps = 72/552 (13%)
Query: 34 TGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWSF 93
T +Q ++ + +A+ L+ G +GD + + + N ++ + A G I+ LN +
Sbjct: 74 TYRQLREESVTVAKALMAAGYEAGDRIGMWSPNVAEWVSLLYGAARAGVILVNLNPAYRA 133
Query: 94 KEASRAITSIRPVMLV---TDESSD--SWYLELQHTAIPSLRWHVSLGSSSSD----FVN 144
E + + LV D D + + + P LR + L + S + V
Sbjct: 134 HELTYVVEQCDMRGLVVACADARMDPPATARAVARESAPHLRQLIMLPAGSGEDAYAHVQ 193
Query: 145 KRDMLT------------ADILKG---YSLRSLPFTHSWA-PEGAVIICFTSGTTGSPKG 188
D+ AD L G S L + P V + +TSGTTG PKG
Sbjct: 194 AGDVADRHAADPVAEGTWADFLAGAARVSDEDLAVREAATRPADPVNLQYTSGTTGFPKG 253
Query: 189 VVISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KF 246
V ++H ++ ++GY E+D + P H G+ + + IP F
Sbjct: 254 VTLTHRNVLNNGFHIGELLGYTEEDTVVIPVPFFHCFGMVIGVIATVSHGSLAVIPARSF 313
Query: 247 ESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKE 306
E SAL AV TSL VPA+ +A L R + +++ + G P E+MK+
Sbjct: 314 EPVSALRAVAATGATSLYGVPAMF--IAMLARPEADALDLSTLRTGVMAGSTCPVEVMKK 371
Query: 307 ATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVG 366
+ F +++ YGMTET+ ++ MT D +LE Q VG
Sbjct: 372 VIDRFHMSEVAICYGMTETAP-VSTMTRRDDSLEVRTQ-------------------TVG 411
Query: 367 KPAPHVELKVCSDGSSHV------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDI 420
+ PHVE K+ + + G + TRG VML YWD V + W+ +GD+
Sbjct: 412 RTMPHVETKIVEPVTGDIVPRGATGELCTRGYSVMLGYWDAPEKTAEVLDADGWMHSGDL 471
Query: 421 GSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVA 480
S+D+ G+V + GR + GGEN+ P EVE L HP I + VVG+ + + E ++A
Sbjct: 472 ASMDEDGSVRIEGRIKDLVIRGGENISPREVEEFLYTHPDIQDVQVVGVPDEKYGEQLMA 531
Query: 481 CVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTS 540
CV +++ + L+ + +R+ + + FK P V FP+T
Sbjct: 532 CVIMKDGVE---------------PLTVDAVREFAAGR-IAHFKIP-AHVRVLDAFPMTV 574
Query: 541 TGKIRRDEVRRE 552
+GK+R+ E+R E
Sbjct: 575 SGKVRKVELREE 586
>gi|452956310|gb|EME61703.1| AMP-dependent synthetase and ligase [Amycolatopsis decaplanina DSM
44594]
Length = 523
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 226/527 (42%), Gaps = 61/527 (11%)
Query: 33 NTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFIGGIVAPLNYRWS 92
T + Q L LA L G+ G VA LN W++E + A +G + PL++R +
Sbjct: 39 TTWAELSQRSLRLATALAARGVTEGHRVATLTLNHPWFVESVFAANSLGAMAVPLSFRLA 98
Query: 93 FKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHVSLGSSSSDFVNKRDMLTAD 152
E + P +V D + L L A + L D R +
Sbjct: 99 PAELDYILADCTPSAIVID----ARLLPLLDAAPSAASIGTVLVLGEPDDAEGRTAYE-E 153
Query: 153 ILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKI-AIVGYGE 211
L + LP E +I +TSGTTG PKGV++SH L +Q++ I A+ + +
Sbjct: 154 FLAAHEPMELPDVSE---ESTALIMYTSGTTGRPKGVMLSHRNLQLQAITCIRAMKIFDD 210
Query: 212 DDVYLHTAPLCHIGGLSSAMAMLMVGACHVFIP--KFESKSALEAVEQHCVTSLITVPAI 269
DV TAP HI GL S +A +VG V P F+ ++ L+A E+ T + VP
Sbjct: 211 TDVAFLTAPFFHIAGLGSIVANFLVGGVVVIHPLGAFDPRAVLDAYEREGATVVFNVPQQ 270
Query: 270 MADLATLIRVKKTWKGRDSVKKILNGGGGLPSE-LMKEATNSFPKAKLISAYGMTETSSS 328
LI + RD ++++ G +E + FP A ++ +G TETS
Sbjct: 271 W----DLICAQPDIAARDLKLRVISWGAAPATESTLLAMAEKFPGALNVAVFGQTETSPI 326
Query: 329 LTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSD-----GSSH 383
++ D + G+V GKP P ++ +V D
Sbjct: 327 TCVLSGEDSV--------RKLGSV-------------GKPIPTLQYRVVDDDMNDVAPGE 365
Query: 384 VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGG 443
VG I+ RG + YW + G W +GD+ S D+ G +W+V R+ I SGG
Sbjct: 366 VGEIVYRGPTLTKGYWQKPQETAEAFAGG-WFHSGDLVSQDEDGFIWVVDRKKDMIISGG 424
Query: 444 ENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKE 503
EN+Y EVE + HP ++ + V+G A+ R ++ VA + + D + E
Sbjct: 425 ENIYCAEVENAISAHPSVLEVAVIGRADERWGQVPVAYI---------TTPPDAAPSLGE 475
Query: 504 LLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVR 550
L+ E L + L FK P+ V+ R+ P + GK+ + +R
Sbjct: 476 LI---EFL-----DGRLASFKMPKDLVVIRE-LPRNAGGKVVKGSLR 513
>gi|423643940|ref|ZP_17619558.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD166]
gi|423646939|ref|ZP_17622509.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD169]
gi|401272590|gb|EJR78582.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD166]
gi|401286333|gb|EJR92153.1| O-succinylbenzoate-CoA ligase [Bacillus cereus VD169]
Length = 518
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 240/539 (44%), Gaps = 54/539 (10%)
Query: 21 RNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISALNSEWYLEWILAVAFI 80
+ ++V N T +Q+ + + A LLE G+R GD V++ N ++ LA A I
Sbjct: 19 KEALVEPEKNIRWTYKQWDEQINKTAHALLEEGVRKGDTVSVYLYNCYEFVNVYLACAKI 78
Query: 81 GGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTAIPSLRWHV-----SL 135
G I P+N+R KE S + ++V +++ +S ++ + W + S
Sbjct: 79 GAIFNPINFRLKAKEVSYILQDASSKVVVFEKAVESTVAIIERDFPNTSFWSIENDKPSY 138
Query: 136 GSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSA 195
SS + VN+ +I + + + + +TSGTTG PKGV+ H
Sbjct: 139 ASSYHEKVNEASSEKVNI----EIDEMDYCS---------MLYTSGTTGHPKGVLHRHRE 185
Query: 196 LIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAM-AMLMVGACHVFIPKFESKSALEA 254
+ S+ + Y D V L APL H G L++ + + VG +V + F++++ L
Sbjct: 186 MAEHSMICTYFLKYNRDSVGLVVAPLYHCGELNAGIIPRIQVGGKNVILHHFDTETVLHT 245
Query: 255 VEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKA 314
+++ +T+ P + L++ S+K + GG + L+KE
Sbjct: 246 IQEEKITTFFAAPTMWN---MLLQKDLAQYDLTSMKIGIYGGAAMAPALVKECKERL-YI 301
Query: 315 KLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVEL 374
L+ YGMTE + F+ D Q+ +A TP H+ + V + AP
Sbjct: 302 DLVQIYGMTEMGPVVAFLVEED-------QITKAGSAGTPCFSHEVRIVKPNEDAPAEPD 354
Query: 375 KVCSDGSSHVGRILTRGAHVMLRYWDQFLA-KPSVSTGEVWLDTGDIGSIDDGGNVWLVG 433
V VG I+ RG +M Y ++ A K S+ G W +GD+G D G +++
Sbjct: 355 DVLP--PYEVGEIILRGPTMMAGYHNREEANKKSMYKG--WYHSGDLGYFDKDGYLFVAD 410
Query: 434 RRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSES 493
R + + SGG N+YP E+E L HPGI+ + V+G + E VVA +
Sbjct: 411 RVDDMVISGGVNIYPREIEDFLHSHPGILDVAVLGEPDELWGERVVAVIV---------- 460
Query: 494 NCDQSSKNKELLLSSEVLRQHCREKN-LTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRR 551
K+ ++ L +C+E + L +K PR + L+ P ++GK+++ +R
Sbjct: 461 -------KKDETITEADLETYCKESDELADYKRPRHY-LFVDELPRNASGKLQKFVLRE 511
>gi|108800170|ref|YP_640367.1| o-succinylbenzoate--CoA ligase [Mycobacterium sp. MCS]
gi|119869298|ref|YP_939250.1| o-succinylbenzoate--CoA ligase [Mycobacterium sp. KMS]
gi|126435793|ref|YP_001071484.1| o-succinylbenzoate--CoA ligase [Mycobacterium sp. JLS]
gi|108770589|gb|ABG09311.1| O-succinylbenzoate-CoA ligase [Mycobacterium sp. MCS]
gi|119695387|gb|ABL92460.1| O-succinylbenzoate-CoA ligase [Mycobacterium sp. KMS]
gi|126235593|gb|ABN98993.1| O-succinylbenzoate-CoA ligase [Mycobacterium sp. JLS]
Length = 517
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 242/557 (43%), Gaps = 62/557 (11%)
Query: 6 QAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVAISAL 65
Q I Q +SR A + I+ H T + +A L+ +G+R GD VA+ +
Sbjct: 2 QLGIGQWVSRRAFLNGGRTALISNGAHITYADLDRRTNQVAAALIALGVRKGDRVAMLLV 61
Query: 66 NSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRPVMLVTDESSDSWYLELQHTA 125
NS ++E +L A IG + PLN R + E + +LV E + +
Sbjct: 62 NSTEFIEVLLGCAKIGALAVPLNVRLAGPEIGYILADSGADVLVFHEPFAAQARSAVTES 121
Query: 126 IPSLRWHVSLGSSSSDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGS 185
+R V G + ++ D++ G + P I +TSGTTG
Sbjct: 122 GVRVRHVVRAGGVPA----PGELGYEDVVSGAAPE--PLNGDVDGRDPAFIMYTSGTTGR 175
Query: 186 PKGVVISHSALIVQSLAKIAI-VGYGEDDVYLHTAPLCHIGGLS-SAMAMLMVGACHVFI 243
PKG +++H L+ ++ + +G +DV + AP+ HIGGL + +L VG V +
Sbjct: 176 PKGAILTHDNLLWNAINVLGTDIGLRGEDVTVAVAPMFHIGGLGVHTLPLLYVGGTSVIM 235
Query: 244 PKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLP--- 300
P FE ++ L+A+ H VT VPA+ L + +++ + GG +P
Sbjct: 236 PSFEPRATLQAMADHHVTVQFMVPAMWTALTQVPDFDSF--NLSALRFAMGGGSPVPLTV 293
Query: 301 SELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQP 360
+ M+E F + +GMTET+ +T + NV+ +
Sbjct: 294 IDFMRERGVPFTEG-----FGMTETAPLVTVLDAE---------------NVSTRAG--- 330
Query: 361 QGVCVGKPAPHVELKVCSDGSSH-----VGRILTRGAHVMLRYWDQFLAKPSVSTGEVWL 415
+G+ A HV+ ++ D VG ++ RG +V YW + A G W
Sbjct: 331 ---SIGRVAMHVDARIVDDDDRDVATDTVGELIVRGPNVFTGYWMKAEASAEALRGG-WF 386
Query: 416 DTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLT 475
TGD+G +D G + LV R+ I SGGENVYP EVE VL +HP + V+G +A+
Sbjct: 387 HTGDLGRMDAEGFITLVDRKKDMIISGGENVYPIEVEQVLFRHPAVFDAAVIGGKDAKWG 446
Query: 476 EMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKP 535
E R Q+ +E++ CRE+ L FK PR V +
Sbjct: 447 E--------RVVAVVVADPATQAPSAEEIV-------AWCRER-LAHFKCPR-DVHFVAE 489
Query: 536 FPLTSTGKIRRDEVRRE 552
P +TGK+ + E+R +
Sbjct: 490 LPRNATGKLLKTELRAQ 506
>gi|170740558|ref|YP_001769213.1| AMP-binding domain-containing protein [Methylobacterium sp. 4-46]
gi|168194832|gb|ACA16779.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 565
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 231/539 (42%), Gaps = 68/539 (12%)
Query: 45 LARGLLEIGLRSGDIVAISALN-SEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSI 103
A GLL +GL GD + I +LN +EW L A A G I+ +N + E A+ +
Sbjct: 61 FAAGLLALGLERGDRIGIWSLNNAEWALTQ-FAAAKAGLILVTVNPAYRLAELEFALNKV 119
Query: 104 RPVMLVTDES-SDSWYL----------------ELQHTAIPSLRWHVSLGSSSSDFVNKR 146
LVT + S YL L+ +P LR + +G +S
Sbjct: 120 GCKALVTARAFKTSDYLGMLTTLAPELREAEPGRLRAARLPQLRVVIEIGGNSLPGTLAF 179
Query: 147 DMLTADILKGYSLRSLPFTHSWAPEGAVIICFTSGTTGSPKGVVISHSALIVQSLAKIAI 206
+ + R + + V I FTSGTTGSPKGV +SH ++
Sbjct: 180 EAVAERAGAAERARVAANRAALQFDDPVNIQFTSGTTGSPKGVTLSHHNILNNGSFVGRA 239
Query: 207 VGYGEDDVYLHTAPLCHIGGLSSA-MAMLMVGACHVFIPK-FESKSALEAVEQHCVTSLI 264
+ G +D PL H G+ +A + GA V+ + F+ + L AVE T+L
Sbjct: 240 MRLGPEDRICIPVPLYHCFGMVMGNLAAVTSGAAMVYPGEGFDPLATLRAVEAERCTALY 299
Query: 265 TVPAIMADLATLIRVKKTWKGRDSVKKILNGGGGLPSELMKEATNSFPKAKLISAYGMTE 324
VP + LA L ++ S++ + G P +M+ A + +L YGMTE
Sbjct: 300 GVPTMF--LAQLDHLEFARFDLSSLRTGIMAGSPCPIAVMQRAVDRMHLRELTICYGMTE 357
Query: 325 TSSSLTFMTLYDPTLETPGQLPQAFGNVTPNSVHQPQGVCVGKPAPHVELKVCSDGSSHV 384
TS ++F + D LE + VG+ PH E+K+ D +
Sbjct: 358 TSP-VSFQSAVDDPLER-------------------RVSTVGRIHPHTEVKIV-DAEGRI 396
Query: 385 ------GRILTRGAHVMLRYWDQFLAKPSVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGR 438
G + TRG VM YWD V W+ TGD+ ++DD G +VGR
Sbjct: 397 VPRGTPGELCTRGYSVMRGYWDDPEKTAEVRDAAGWMHTGDLATLDDQGFCNIVGRIKDL 456
Query: 439 IKSGGENVYPEEVEAVLLQHPGIIGIVVVGIANARLTEMVVACVRLRESWQWSESNCDQS 498
+ GGENVYP EVE L +HP I + V G+ + R E + A V+LR
Sbjct: 457 VIRGGENVYPREVEEFLYRHPAIQEVQVFGVPDPRYGEELCAWVKLRPG----------- 505
Query: 499 SKNKELLLSSEVLRQHCREKNLTGFKAPRLFVLWRKPFPLTSTGKIRRDEVRREVMSHL 557
L++E LR HC + K PR +V + FP+T TGK+++ +R ++ L
Sbjct: 506 -----ATLTAEELRAHC-GGQIAHQKIPR-YVEFVDAFPMTVTGKMQKYLMREAMIERL 557
>gi|316935084|ref|YP_004110066.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
gi|315602798|gb|ADU45333.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
Length = 542
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 241/564 (42%), Gaps = 68/564 (12%)
Query: 2 ANYSQAHICQCLSRIAAVKRNSVVTITGNRHNTGQQFVQDVLNLARGLLEIGLRSGDIVA 61
A+ A + + A + N + R +T F + +AR L G++ + +A
Sbjct: 20 ASSEPATLADVIRAQAETRGNEIAYEFEGRISTFADFDRHTNQVARALQASGVQPNERIA 79
Query: 62 ISALNSEWYLEWILAVAFIGGIVAPLNYRWSFKEASRAITSIRP-VMLVTDESSDSWYLE 120
NS+ Y E ++AP+N+R + E + + + ++ V E D +
Sbjct: 80 YLGKNSDIYFELWSGAIKAKAVMAPVNWRLAGPEIAYIVEDCKAAILFVGPEFVDQ--VR 137
Query: 121 LQHTAIPSLRWHVSLGSSS---SDFVNKRDMLTADILKGYSLRSLPFTHSWAPEGAVIIC 177
IPS+R ++ + DF RD +D + + AP I
Sbjct: 138 GLKDQIPSVRHIITTEGGAPEWQDFAKWRDAQPSDDPQ----------VAIAPSDIAIQL 187
Query: 178 FTSGTTGSPKGVVISHSALIVQSLAKIAIVGYGE------DDVYLHTAPLCHIGGLSSAM 231
+TSGTTG PKG ++SH+ + SL + E DDV L P+ HIGG M
Sbjct: 188 YTSGTTGKPKGAMLSHANFL--SLVRAGQDNKPEWNTWTPDDVSLVAMPVFHIGGSGWGM 245
Query: 232 AMLMVGACHVFIPKFESKSALEAVEQHCVTSLITVPAIMADLATLIRVKKTWKGRDSVKK 291
+ GA V +F+ L+ EQ +T L VPA M + R ++ R +K
Sbjct: 246 MGIYHGAKGVIAREFDPTKVLDFFEQSGITKLFMVPAAMQFVVRQPRAREVDFSR--LKY 303
Query: 292 ILNGGGGLPSELMKEATNSFPKAKLISAYGMTETSSSLTFMTLYDPTLETPGQLPQAFGN 351
+L G +P+ L+KE F K + YGMTET+ ++ + D +E ++ A
Sbjct: 304 MLYGASPIPAALLKECIEVF-KCGFVQMYGMTETTGTIVALPPED-HVEGLERMRSA--- 358
Query: 352 VTPNSVHQPQGVCVGKPAPHVELKVCS-DGSS----HVGRILTRGAHVMLRYWDQFLAKP 406
GK P VE+ + DG VG I TR M+ YW+ A
Sbjct: 359 --------------GKALPGVEIAILDPDGKPLPPRQVGEIATRSGSNMVGYWNLPDATK 404
Query: 407 SVSTGEVWLDTGDIGSIDDGGNVWLVGRRNGRIKSGGENVYPEEVEAVLLQHPGIIGIVV 466
+ WL TGD G +D+ G V++ R I SGGEN+YP EVE+ + HP + + V
Sbjct: 405 KTIDADNWLRTGDAGYMDEDGYVYIHDRIKDMIISGGENIYPAEVESAICDHPDVAEVAV 464
Query: 467 VGIANARLTEMVVACVRLRESWQWSESNCDQSSKNKELLLSSEVLRQHCREKNLTGFKAP 526
VG+ + + E V A V ++ + + + ++ + + G+K P
Sbjct: 465 VGVPDDQWGEAVKAVVVMKPGKEATAQDIIGFTRTR-----------------IAGYKTP 507
Query: 527 RLFVLWRKPFPLTSTGKIRRDEVR 550
+ + + P ++GKI R ++R
Sbjct: 508 KS-IDFIPALPRNASGKILRRQLR 530
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,063,622,015
Number of Sequences: 23463169
Number of extensions: 387895058
Number of successful extensions: 1231727
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 34222
Number of HSP's successfully gapped in prelim test: 21670
Number of HSP's that attempted gapping in prelim test: 1047793
Number of HSP's gapped (non-prelim): 110224
length of query: 564
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 416
effective length of database: 8,886,646,355
effective search space: 3696844883680
effective search space used: 3696844883680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)