BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008492
(563 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DJ55|TBRG4_XENTR Protein TBRG4 OS=Xenopus tropicalis GN=tbrg4 PE=2 SV=2
Length = 633
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 141/350 (40%), Gaps = 82/350 (23%)
Query: 229 MDRVAEVALTKVGEFNSQNVANVAGAFASMQHSAPDLFSELAKRASDIVHTFQEQELAQV 288
++A L KV E ++ ++A +FA ++ S LF A+ + D F +L +
Sbjct: 314 FQKMASDLLPKVPEMSANDIARCVKSFAYLKWSNLPLFEAFAQASIDQSEKFTVPQLCNL 373
Query: 289 LWAFASL-YEPADPLLESLDNAFKDATQFTCCLNKALSNCNENGGVKSSGDADSEGSLSS 347
+ AF L ++P+ +F +++ L +E L
Sbjct: 374 VLAFGRLNFQPSK------------REEFYSMMHQKL---------------HAELDLLD 406
Query: 348 PVLSFNRDQLGNIAWSYAVLGQMDRIFFSDIWKT--ISRF--EEQRISEQYREDIMFASQ 403
P L L +I WS VL Q+D + S + + SRF + S YR +
Sbjct: 407 PYL------LVDIVWSLCVLRQVDSSYISKVLEPGLYSRFFTDSSPRSANYRLKLAH--- 457
Query: 404 VHLVNQCLKLEHPHLQLALSSVLEEKIASAGKTKRFNQKVTS--SFQKEVARLLVST--- 458
+N LEHP + + E I++ N+K++ S +EV R L
Sbjct: 458 ---INATALLEHP--EYTGPHLPNESISTTHAVTA-NRKLSPLQSGLQEVLRELFPVEGT 511
Query: 459 ---GLNWIREYAVDGYTV------DAVLVD-------------------KKVAF-EIDGP 489
G+N + + +DG V L+D ++ AF D P
Sbjct: 512 CRCGVNTVYGWYIDGEVVLDSDNKPLSLMDLEAPHLPHSQGKKPLPEGTRRFAFVAWDFP 571
Query: 490 THFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQLDYLR 539
SR+ + LG +L RR++ AAG+ VV + + EW +L+ +++ YL+
Sbjct: 572 NFNSRSKDL-LGRFVLTRRHLQAAGFLVVEVPYYEWLDLKSEWQKSAYLK 620
>sp|Q58CX2|FAKD3_BOVIN FAST kinase domain-containing protein 3 OS=Bos taurus GN=FASTKD3
PE=2 SV=2
Length = 660
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 469 DGYTVDAVL---VDKKVAFEIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEW 525
DG+ + + V K+VA IDGP F N+ LG K+R++ G+ VV + + E
Sbjct: 575 DGFVLPFTIDEDVHKRVALCIDGPKRFCLNSKHLLGKEATKQRHLRLLGYQVVQIPYYEI 634
Query: 526 EELQGSFEQLDYLR 539
E L+ E +DYL+
Sbjct: 635 EMLKSRLELVDYLQ 648
>sp|Q8BSN9|FAKD3_MOUSE FAST kinase domain-containing protein 3 OS=Mus musculus GN=Fastkd3
PE=2 SV=2
Length = 661
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 469 DGYTVDAVL---VDKKVAFEIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEW 525
DG+ + + + K+VA IDGP F ++ LG K+R++ G+ VV L + E
Sbjct: 576 DGFVLPCTVDEDIHKRVALCIDGPQRFCLDSKHLLGKEATKQRHLRLLGYQVVQLPYHEL 635
Query: 526 EELQGSFEQLDYLR 539
E L E +DYL+
Sbjct: 636 ELLTSRLELVDYLQ 649
>sp|Q68FN9|FAKD3_RAT FAST kinase domain-containing protein 3 OS=Rattus norvegicus
GN=Fastkd3 PE=2 SV=2
Length = 656
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 469 DGYTVDAVL---VDKKVAFEIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEW 525
DG+ + + V +VA IDGP F + LG +K+R++ G+ VV + + E
Sbjct: 571 DGFVLPFTVDEDVHTRVALCIDGPQRFCLGSKHLLGKEAIKQRHLRLLGYQVVQVPYHEL 630
Query: 526 EELQGSFEQLDYLR 539
E L E +DYL+
Sbjct: 631 ELLTSRLELVDYLQ 644
>sp|Q14CZ7|FAKD3_HUMAN FAST kinase domain-containing protein 3 OS=Homo sapiens GN=FASTKD3
PE=2 SV=2
Length = 662
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 478 VDKKVAFEIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQLDY 537
+ K++A IDGP F N+ LG +K+R++ G+ VV + + E L+ E ++Y
Sbjct: 587 IHKRIALCIDGPKRFCSNSKHLLGKEAIKQRHLQLLGYQVVQIPYHEIGMLKSRRELVEY 646
Query: 538 LR 539
L+
Sbjct: 647 LQ 648
>sp|Q6PA48|TBRG4_XENLA Protein TBRG4 OS=Xenopus laevis GN=tbrg4 PE=2 SV=1
Length = 633
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 163/403 (40%), Gaps = 93/403 (23%)
Query: 182 LAFTRQREMSMLVAIAMTALPE---CSAQGISNIAWALSKIGGELLYLSEMDRVAEVALT 238
LA +R +++L A++ + S + ++A+A K+ + ++A L
Sbjct: 266 LAAQNRRSVALLRALSYHLVQRHFALSPPVVVDLAYAYGKLNFHQTQV--FQKMASDLLP 323
Query: 239 KVGEFNSQNVANVAGAFASMQHSAPDLFSELAKRASDIVHTFQEQELAQVLWAFASL-YE 297
V E + +++ +FA ++ S LF A+ + D F +L ++ AF L ++
Sbjct: 324 NVPEMSPSDISRCIKSFAYLKWSNLPLFEAFAQTSIDRCEKFTVLQLCNLVLAFGRLNFQ 383
Query: 298 PADPLLESLDNAFKDATQFTCCLNKALSNCNENGGVKSSGDADSEGSLSSPVLSFNRDQL 357
P+ +F +++ L +E L +P L L
Sbjct: 384 PSK------------QEEFYNMVHQRL---------------HTELDLLNPYL------L 410
Query: 358 GNIAWSYAVLGQMDRIFFSDIWKT--ISRF--EEQRISEQYREDIMFASQVHLVNQCLKL 413
++ WS VL Q++ + S + + S+F + S YR + +N L
Sbjct: 411 VDVVWSLCVLQQVNSSYISKVLEPDFCSKFFTDGSPRSANYRLKLAH------INAAALL 464
Query: 414 EHPHLQLALSSVLEEKIASAGKTKRFNQKVT---SSFQKEVARLLVSTGLNWIREYAVD- 469
EHP S+L + SA ++ N+K++ S Q+ + + G Y VD
Sbjct: 465 EHPDYT---GSLLPVESISAAQSVSANRKLSPLQSGLQEVLREVFPVEGTC---RYGVDT 518
Query: 470 --GYTVDA-VLVD-----------------------------KKVAFE-IDGPTHFSRNT 496
G+ +D V+VD ++ AF D P SR+
Sbjct: 519 VYGWYIDGEVVVDSDNKALPLTDLQTPNLLQSQGKKPLPGGARRFAFVGWDFPNFNSRSK 578
Query: 497 GVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQLDYLR 539
+ LG ++ RR++ AAG+ +V + + EW +L+ +++ Y++
Sbjct: 579 DL-LGRFVMTRRHLQAAGYLLVEVPYYEWLDLKSEWQKSAYVK 620
>sp|Q7W6L4|GLGB_BORPA 1,4-alpha-glucan branching enzyme GlgB OS=Bordetella parapertussis
(strain 12822 / ATCC BAA-587 / NCTC 13253) GN=glgB PE=3
SV=1
Length = 731
Score = 39.7 bits (91), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ + E G+ +N + + ++EV L+++ ++W+R Y VDG VDAV
Sbjct: 361 TPLYEHADPHEGRHPDWNTLIYNYGRREVRAFLIASAIHWLRHYHVDGLRVDAV 414
>sp|Q7VYK0|GLGB_BORPE 1,4-alpha-glucan branching enzyme GlgB OS=Bordetella pertussis
(strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=glgB
PE=3 SV=1
Length = 731
Score = 39.7 bits (91), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ + E G+ +N + + ++EV L+++ ++W+R Y VDG VDAV
Sbjct: 361 TPLYEHADPREGRHPDWNTLIYNYGRREVRTFLIASAIHWLRHYHVDGLRVDAV 414
>sp|Q7WII7|GLGB_BORBR 1,4-alpha-glucan branching enzyme GlgB OS=Bordetella bronchiseptica
(strain ATCC BAA-588 / NCTC 13252 / RB50) GN=glgB PE=3
SV=1
Length = 731
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ + E G+ +N + + ++EV L+++ ++W+R Y VDG VDAV
Sbjct: 361 TPLYEHADPREGRHPDWNTLIYNYGRREVRAFLIASAIHWLRHYHVDGLRVDAV 414
>sp|Q3SZK4|TBRG4_BOVIN Protein TBRG4 OS=Bos taurus GN=TBRG4 PE=2 SV=1
Length = 632
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 480 KKVAF-EIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQLDYL 538
K++AF + P SR+ + LG ML RR++ AAG+ +V + + EW EL+ +++ YL
Sbjct: 560 KRLAFLRWEFPNFNSRSKDL-LGRFMLARRHLLAAGFLLVDVPYYEWMELKSEWQKSAYL 618
Query: 539 RVILKDYIGGE 549
+ ++ + E
Sbjct: 619 KDKMRKAVAEE 629
>sp|Q6GQ66|FAKD1_XENLA FAST kinase domain-containing protein 1 OS=Xenopus laevis
GN=fastkd1 PE=2 SV=1
Length = 832
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 480 KKVAFEIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQ--LDY 537
++VA E FS+N+ G M+K+R++ G++V+ +S EW ++ S + +DY
Sbjct: 763 QRVAIEFLDSKAFSKNSSNIKGEYMMKKRHLEILGYHVLQISSLEWNSMELSTKDAWMDY 822
Query: 538 LR 539
LR
Sbjct: 823 LR 824
>sp|Q13S07|GLGB_BURXL 1,4-alpha-glucan branching enzyme GlgB OS=Burkholderia xenovorans
(strain LB400) GN=glgB PE=3 SV=1
Length = 736
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ + E G + +N + + + EV+ L+++GL W++ Y VDG VDAV
Sbjct: 364 TPLYEHADPREGYHQDWNTMIYNLGRNEVSAFLIASGLAWLKRYHVDGLRVDAV 417
>sp|Q7YS91|TBRG4_PIG Protein TBRG4 OS=Sus scrofa GN=TBRG4 PE=2 SV=2
Length = 632
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 140/370 (37%), Gaps = 89/370 (24%)
Query: 211 NIAWALSKIGGELLYLSEMDRVAEVALTKVGEFNSQNVANVAGAFASMQHSAPDLFSELA 270
++A+A K+G + R+A L S VA +FA ++ + LF A
Sbjct: 298 DLAYAYGKLGFHQTQV--FQRLAADLLPHTPSLTSSEVARCTKSFAFLKWLSLPLFEAFA 355
Query: 271 KRASDIVHTFQEQELAQVLWAFASL-YEPADPLLESLDNAFKDATQFTCCLNKALSNCNE 329
+ D + L +L AFA + + P E D F S +E
Sbjct: 356 QHVLDRAQSIALPHLCNMLLAFARVNFRP-----EREDQFF--------------SLVHE 396
Query: 330 NGGVKSSGDADSEGSLSSPVLSFNRDQLGNIAWSYAVLGQMDRIFFSDIWKTISRFEEQR 389
G + +G P L + + WS VL Q + + Q
Sbjct: 397 KLGSQLAG--------LEPALQVD------VVWSLCVLQQAREAELQAVLR--PELHGQF 440
Query: 390 ISEQYREDIMFASQVHLVNQCLKLEHP-----HLQLALSSVLEEKIASAGKTKRFNQKVT 444
+ ++ +D ++ +N +LEHP HL SS L + ++ ++KVT
Sbjct: 441 LGDKSPKDQSTFQKLLHINATAQLEHPEYTGPHLP---SSALVPRPSA------LDKKVT 491
Query: 445 SSFQKEV-------------ARLLVSTGLNWI--REYAVDGYTVDAVLVD---------- 479
QKE+ LV+T WI E +D + L D
Sbjct: 492 P-LQKELQETLKGLLGSADKGSFLVATRYGWILDAEVLLDADSQLLPLRDFVAPHLAQPS 550
Query: 480 ---------KKVAFEI-DGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQ 529
K++AF + P SR+ + LG +L RR++ AAG+ +V + + EW EL+
Sbjct: 551 GSQPLPAGAKRLAFLCWEFPNFNSRSKDL-LGRFVLARRHLLAAGFLLVDVPYYEWLELK 609
Query: 530 GSFEQLDYLR 539
+++ YL+
Sbjct: 610 SEWQKSAYLK 619
>sp|Q5M9G9|TBRG4_RAT Protein TBRG4 OS=Rattus norvegicus GN=Tbrg4 PE=2 SV=1
Length = 629
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 480 KKVAF-EIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQLDYL 538
K++AF + P SR+ + LG +L RR++ AAG+ VV + + EW +L+ +++ YL
Sbjct: 557 KRIAFLRWEFPNFNSRSKDL-LGRFVLARRHVLAAGFLVVDVPYYEWLDLKSEWQKTAYL 615
Query: 539 RVILKDYIGGE 549
+ ++ + E
Sbjct: 616 KDKMRKAVAEE 626
>sp|A0KDG4|GLGB_BURCH 1,4-alpha-glucan branching enzyme GlgB OS=Burkholderia cenocepacia
(strain HI2424) GN=glgB PE=3 SV=1
Length = 736
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 419 QLALSSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
Q S++ E G +N V + + EV+ LV++ L W R Y VDG VDAV
Sbjct: 360 QFDGSALYEHADPREGMHPDWNTCVFNVGRTEVSAFLVASALAWARRYHVDGIRVDAV 417
>sp|Q1BVW7|GLGB_BURCA 1,4-alpha-glucan branching enzyme GlgB OS=Burkholderia cenocepacia
(strain AU 1054) GN=glgB PE=3 SV=1
Length = 736
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 419 QLALSSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
Q S++ E G +N V + + EV+ LV++ L W R Y VDG VDAV
Sbjct: 360 QFDGSALYEHADPREGMHPDWNTCVFNVGRTEVSAFLVASALAWARRYHVDGIRVDAV 417
>sp|Q07K87|GLGB_RHOP5 1,4-alpha-glucan branching enzyme GlgB OS=Rhodopseudomonas
palustris (strain BisA53) GN=glgB PE=3 SV=1
Length = 715
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+S+ E G+ + + + + EV LVS L W+ YAVDG VDAV
Sbjct: 348 TSLYEHANPLQGRHNDWGTLIYNYGRTEVVNFLVSNALFWLERYAVDGLRVDAV 401
>sp|Q0B3Y4|GLGB_BURCM 1,4-alpha-glucan branching enzyme GlgB OS=Burkholderia ambifaria
(strain ATCC BAA-244 / AMMD) GN=glgB PE=3 SV=1
Length = 733
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 419 QLALSSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
Q S++ E G +N V + + EV+ L+++ L W R Y VDG VDAV
Sbjct: 357 QFDGSALYEHADPREGMHPDWNTCVFNLGRNEVSAFLIASALAWARRYHVDGIRVDAV 414
>sp|P30539|GLGB_BUTFI 1,4-alpha-glucan branching enzyme GlgB OS=Butyrivibrio fibrisolvens
GN=glgB PE=1 SV=1
Length = 639
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ + E+ G+ + K+ + + EV L++ L WIR++ +DG VDAV
Sbjct: 262 TCIYEDPDPRKGEHPDWGTKIFNLAKPEVKNFLIANALYWIRKFHIDGLRVDAV 315
>sp|Q91YM4|TBRG4_MOUSE Protein TBRG4 OS=Mus musculus GN=Tbrg4 PE=2 SV=1
Length = 630
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 480 KKVAF-EIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQLDYL 538
K++AF + P SR+ + LG +L RR++ AAG+ VV + + EW +L+ +++ YL
Sbjct: 558 KRIAFLRWEFPNFNSRSKDL-LGRFVLARRHVLAAGFLVVDVPYYEWLDLKSEWQKSAYL 616
Query: 539 R 539
+
Sbjct: 617 K 617
>sp|A4JR39|GLGB_BURVG 1,4-alpha-glucan branching enzyme GlgB OS=Burkholderia
vietnamiensis (strain G4 / LMG 22486) GN=glgB PE=3 SV=1
Length = 733
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 419 QLALSSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
Q S++ E G +N V + + EV+ L+++ L W R Y VDG VDAV
Sbjct: 357 QFDGSALYEHADPREGMHPDWNTCVFNLGRNEVSAFLIASALAWARRYHVDGIRVDAV 414
>sp|Q2T6R3|GLGB_BURTA 1,4-alpha-glucan branching enzyme GlgB OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=glgB PE=3 SV=1
Length = 834
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ + E + G + +N V + + EVA L++ L W+RE+ DG VDAV
Sbjct: 460 THLYEHEDRRVGLHRGWNTLVYNLGRHEVANFLIANALYWLREFHFDGLRVDAV 513
>sp|Q969Z0|TBRG4_HUMAN Protein TBRG4 OS=Homo sapiens GN=TBRG4 PE=1 SV=1
Length = 631
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 480 KKVAF-EIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQLDYL 538
K++AF + P SR+ + LG +L RR+I AAG+ +V + EW EL+ +++ YL
Sbjct: 559 KRLAFLRWEFPNFNSRSKDL-LGRFVLARRHIVAAGFLIVDVPFYEWLELKSEWQKGAYL 617
Query: 539 RVILKDYIGGE 549
+ ++ + E
Sbjct: 618 KDKMRKAVAEE 628
>sp|Q28DE0|FAKD1_XENTR FAST kinase domain-containing protein 1 OS=Xenopus tropicalis
GN=fastkd1 PE=2 SV=1
Length = 832
Score = 37.0 bits (84), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 480 KKVAFEIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFEQ--LDY 537
++VA E FS+N+ G ++K+R++ G++VV ++ EW ++ S + +DY
Sbjct: 763 QRVAIEFLDSKAFSKNSSNIKGEYVMKKRHLEILGYHVVQIASFEWNSMELSTKDAWIDY 822
Query: 538 LR 539
LR
Sbjct: 823 LR 824
>sp|Q6DI86|FAKD1_MOUSE FAST kinase domain-containing protein 1 OS=Mus musculus GN=Fastkd1
PE=2 SV=1
Length = 829
Score = 36.2 bits (82), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 480 KKVAFEIDGPTHFSRNTGVPLGHTMLKRRYIAAAGWNVVSLSHQEWEELQGSFE--QLDY 537
+++A E+ F N G + +K+R++ G+ V+ + + EW + S + ++DY
Sbjct: 759 ERIAIELLDVRAFCSNIPHLKGKSAMKKRHLEILGYRVIQIPYFEWNSMAMSTKDARMDY 818
Query: 538 LRVILKDYIGGEGSS 552
LR +++ GEG S
Sbjct: 819 LR----EHLFGEGKS 829
>sp|B3PGN4|GLGB_CELJU 1,4-alpha-glucan branching enzyme GlgB OS=Cellvibrio japonicus
(strain Ueda107) GN=glgB PE=3 SV=1
Length = 737
Score = 36.2 bits (82), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
S++ E + G+ + + + + + EV L++ L W++EY +DG VDAV
Sbjct: 368 SALYEHEDPRLGEHRDWGTLIYNYGRSEVRNFLLANALFWLKEYHIDGLRVDAV 421
>sp|Q89FD3|GLGB_BRAJA 1,4-alpha-glucan branching enzyme GlgB OS=Bradyrhizobium japonicum
(strain USDA 110) GN=glgB PE=3 SV=1
Length = 721
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+S+ E G+ + + + + EV LVS L W+ YA+DG VDAV
Sbjct: 353 TSLYEHANPLQGRHLDWGTLIYNYGRTEVTNFLVSNALFWLERYAIDGLRVDAV 406
>sp|Q2W2Q6|GLGB_MAGSA 1,4-alpha-glucan branching enzyme GlgB OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=glgB PE=3
SV=1
Length = 740
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 405 HLVNQCLKLEHPHLQLALSSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIR 464
H N L H + + E + G K +N + + + EV L + L W+
Sbjct: 354 HFPNDPHGLHH----FDGTHLYEHEDPRLGVHKDWNTLIYNYGRSEVVNYLYANALYWLE 409
Query: 465 EYAVDGYTVDAV 476
+Y VDG VDAV
Sbjct: 410 QYHVDGLRVDAV 421
>sp|Q6A8Q7|GLGB_PROAC 1,4-alpha-glucan branching enzyme GlgB OS=Propionibacterium acnes
(strain KPA171202 / DSM 16379) GN=glgB PE=3 SV=1
Length = 644
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+++ E G+ K + + + + EV LVS+ L WI E+ DG VDAV
Sbjct: 258 TALYEHADPRQGEHKDWGTYIFNYGRNEVKSFLVSSALYWISEFHADGLRVDAV 311
>sp|Q210H1|GLGB_RHOPB 1,4-alpha-glucan branching enzyme GlgB OS=Rhodopseudomonas
palustris (strain BisB18) GN=glgB PE=3 SV=1
Length = 716
Score = 35.8 bits (81), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+++ E G+ + + + + EV LVS L W+ YAVDG VDAV
Sbjct: 348 TALYEHANPLQGRHMDWGTLIYNYGRTEVVNFLVSNALFWLERYAVDGLRVDAV 401
>sp|Q21WG7|GLGB_RHOFD 1,4-alpha-glucan branching enzyme GlgB OS=Rhodoferax ferrireducens
(strain DSM 15236 / ATCC BAA-621 / T118) GN=glgB PE=3
SV=1
Length = 625
Score = 35.8 bits (81), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ + E G +N + + + EV L+S+GL W+ +Y +DG VD V
Sbjct: 251 THLFEHSDPRQGFHPEWNSSIFNYGRNEVRSFLISSGLFWLDKYHLDGLRVDGV 304
>sp|Q9RTB7|GLGB_DEIRA 1,4-alpha-glucan branching enzyme GlgB OS=Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /
NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=glgB PE=3
SV=1
Length = 705
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
S + E G +N + + EV L+ + L W+++Y VDG VDAV
Sbjct: 258 SPLYEYADPRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWVQDYHVDGLRVDAV 311
>sp|Q11EX1|GLGB_MESSB 1,4-alpha-glucan branching enzyme GlgB OS=Mesorhizobium sp. (strain
BNC1) GN=glgB PE=3 SV=1
Length = 738
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+++ E + G + +N + + ++EVA L + L W+ Y VDG VDAV
Sbjct: 366 TALYEHEDPRLGFHRDWNTLIYNFGRREVANFLTANALFWLDRYHVDGLRVDAV 419
>sp|Q3JCN0|GLGB_NITOC 1,4-alpha-glucan branching enzyme GlgB OS=Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848) GN=glgB PE=3 SV=1
Length = 749
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 419 QLALSSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
Q S++ E + G+ + + + + + EV L+S+ L W+ E+ +DG VDAV
Sbjct: 360 QFDGSALYEHEDPRLGEHRDWGTLIFNYGRHEVRNFLLSSALYWLEEFHIDGLRVDAV 417
>sp|Q65FS4|GLGB_BACLD 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus licheniformis
(strain DSM 13 / ATCC 14580) GN=glgB PE=3 SV=1
Length = 627
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L WI Y +DG+ VDAV
Sbjct: 283 KREVHSFLISNALYWIEMYHIDGFRVDAV 311
>sp|A7GUA1|GLGB_BACCN 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W++ Y +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMKYYHIDGFRVDAV 311
>sp|Q632H1|GLGB_BACCZ 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain
ZK / E33L) GN=glgB PE=3 SV=1
Length = 637
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 275 KREVRNFLISNALFWMRYFHIDGFRVDAV 303
>sp|Q72YJ3|GLGB_BACC1 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain
ATCC 10987) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|Q81K82|GLGB_BACAN 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus anthracis
GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|C3LC26|GLGB_BACAC 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus anthracis
(strain CDC 684 / NRRL 3495) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|C3PCL8|GLGB_BACAA 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus anthracis
(strain A0248) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|Q8NR40|GLGB_CORGL 1,4-alpha-glucan branching enzyme GlgB OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=glgB PE=3 SV=1
Length = 731
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 392 EQYRE--DIMFASQVHLVNQCLKLEHPHLQLALS-----SVLEEKIASAGKTKRFNQKVT 444
+Q+R D A + ++ + P AL+ ++ E G+ K + V
Sbjct: 319 DQFRALVDAFHARGIGVIMDWVPAHFPKDDWALARFDGEALYEHPDWRRGEQKDWGTLVF 378
Query: 445 SSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
+ EV LV+ L WI E+ +DG VDAV
Sbjct: 379 DFGRNEVRNFLVANALYWIEEFHIDGLRVDAV 410
>sp|B7HTX9|GLGB_BACC7 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain
AH187) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|Q1M3A7|GLGB2_RHIL3 1,4-alpha-glucan branching enzyme GlgB 2 OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=glgB2 PE=3 SV=1
Length = 736
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 423 SSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTVDAV 476
S++ E + G + +N + + + EV L+++ L W+ Y +DG VDAV
Sbjct: 364 SALYEHEDPREGFHRDWNTLIYNLGRNEVKGFLIASALEWLERYHIDGLRVDAV 417
>sp|B9J2G8|GLGB_BACCQ 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain
Q1) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|Q2G7S5|GLGB_NOVAD 1,4-alpha-glucan branching enzyme GlgB OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=glgB PE=3 SV=1
Length = 721
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 414 EHPHLQLALSSVLEEKIASAGKTKRFNQKVTSSFQKEVARLLVSTGLNWIREYAVDGYTV 473
EH ++ +++ E + G +N + + ++EV LV+ L W Y VDG V
Sbjct: 344 EHGLVRFDGTALYEHEDPRLGFHPDWNTLIYNFGRREVVSFLVNNALFWAERYHVDGLRV 403
Query: 474 DAV 476
DAV
Sbjct: 404 DAV 406
>sp|Q6HC15|GLGB_BACHK 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus thuringiensis
subsp. konkukian (strain 97-27) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|C1EX54|GLGB_BACC3 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain
03BB102) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|B7JDF1|GLGB_BACC0 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain
AH820) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
>sp|B7HBC7|GLGB_BACC4 1,4-alpha-glucan branching enzyme GlgB OS=Bacillus cereus (strain
B4264) GN=glgB PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 448 QKEVARLLVSTGLNWIREYAVDGYTVDAV 476
++EV L+S L W+R + +DG+ VDAV
Sbjct: 283 KREVRNFLISNALFWMRYFHIDGFRVDAV 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,522,864
Number of Sequences: 539616
Number of extensions: 8108134
Number of successful extensions: 37846
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 37565
Number of HSP's gapped (non-prelim): 302
length of query: 563
length of database: 191,569,459
effective HSP length: 123
effective length of query: 440
effective length of database: 125,196,691
effective search space: 55086544040
effective search space used: 55086544040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)