BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008493
         (563 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225432422|ref|XP_002277919.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|297736933|emb|CBI26134.3| unnamed protein product [Vitis vinifera]
          Length = 716

 Score = 1100 bits (2845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/559 (94%), Positives = 548/559 (98%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQTDGL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKG+ NNV+AVIGDGA
Sbjct: 157 MHTMRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGA 216

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 217 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 276

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 277 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 336

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSSA TQS
Sbjct: 337 VAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSAPTQS 396

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKD+VAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 397 YTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFHRRFPTRCFDVGIAEQHAVTFAAGL 456

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KPFCAIYSSFMQRAYDQVVHDVDLQKLPV+FAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 457 ACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVKFAMDRAGLVGADGPTHCGAFDVTFM 516

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAELFHMVATAAAIDDRPSCFRYPRGNG+GVELPPGNKGIP+EVG+G
Sbjct: 517 ACLPNMVVMAPADEAELFHMVATAAAIDDRPSCFRYPRGNGVGVELPPGNKGIPIEVGRG 576

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYGTAVQSCL AS+LLE +GLR+TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 577 RILIEGERVALLGYGTAVQSCLVASSLLEQHGLRITVADARFCKPLDHALIRSLAKSHEV 636

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFLA +GLLDGT KW P+VLPDRYIDHG+PADQLA AGLTPSH
Sbjct: 637 LITVEEGSIGGFGSHVAQFLALNGLLDGTTKWSPMVLPDRYIDHGAPADQLAMAGLTPSH 696

Query: 541 IAATVFNILGQTREALEIM 559
           IAATVFNILGQTREALEIM
Sbjct: 697 IAATVFNILGQTREALEIM 715


>gi|255551595|ref|XP_002516843.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223543931|gb|EEF45457.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 720

 Score = 1097 bits (2838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/560 (93%), Positives = 546/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGA
Sbjct: 160 MQTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSN+PL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNKPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL
Sbjct: 280 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFK SA TQS
Sbjct: 340 VAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSASTQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 460 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV+LPPGNKGIPLEVGKG
Sbjct: 520 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPPGNKGIPLEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQSCLAA++L+E+  LR+TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 580 RILIEGERVALLGYGSAVQSCLAAASLMETYDLRITVADARFCKPLDHALIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FLA DGLLDG +KWRP++LPDRYIDHGSPADQL +AGLTPSH
Sbjct: 640 LITVEEGSIGGFGSHVAHFLALDGLLDGKLKWRPVILPDRYIDHGSPADQLVEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           IAAT+FNILG  REAL+IMS
Sbjct: 700 IAATIFNILGNKREALQIMS 719


>gi|189017038|gb|ACD70396.1| putative chloroplast 1-deoxy-D-xylulose 5-phosphate synthase
           [Populus trichocarpa]
          Length = 685

 Score = 1089 bits (2817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/560 (92%), Positives = 547/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT+GL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKG  N VVAVIGDGA
Sbjct: 125 MHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGGTNKVVAVIGDGA 184

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPL
Sbjct: 185 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPL 244

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 245 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 304

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EVK+TKTTGPVLIHVVTEKGRGYP+AE+AADKYHGVAKFDPATGKQFK+S  TQS
Sbjct: 305 IAILKEVKSTKTTGPVLIHVVTEKGRGYPFAERAADKYHGVAKFDPATGKQFKASPSTQS 364

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL AEAEVDKD+VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 365 YTTYFAEALTAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 424

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 425 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 484

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATA AIDDRPSCFRYPRGNG+GV+LPPGNKG+PLEVGKG
Sbjct: 485 ACLPNMVVMAPSDEAELFHMVATATAIDDRPSCFRYPRGNGVGVQLPPGNKGVPLEVGKG 544

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+LIEGERVALLGYGTAVQSCLAA++LLE +G+RLTVADARFCKPLDHALIRSLAKSHE+
Sbjct: 545 RMLIEGERVALLGYGTAVQSCLAAASLLERHGIRLTVADARFCKPLDHALIRSLAKSHEI 604

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHGSPADQL +AGLTPSH
Sbjct: 605 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPVVLPDRYIDHGSPADQLVEAGLTPSH 664

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVF+ILGQ REALEIMS
Sbjct: 665 IAATVFSILGQRREALEIMS 684


>gi|164604984|dbj|BAF98288.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 720

 Score = 1087 bits (2810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/560 (93%), Positives = 544/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+T+RQT+GLSGFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKG+KNNVVAVIGDGA
Sbjct: 160 MYTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGKKNNVVAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHE AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKQIGGPMHEWAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFK SA TQS
Sbjct: 340 IAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSAITQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKD+VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 460 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GV+LPPGNKGIPLEVGKG
Sbjct: 520 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVQLPPGNKGIPLEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYGTAVQSCLAA++L+E +GL +TVADARFCKPLDH LIRSLAKSHEV
Sbjct: 580 RILIEGERVALLGYGTAVQSCLAAASLVEPHGLLITVADARFCKPLDHTLIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FLA DGLLDG +KWRPLVLPDRYIDHGSP+ QL +AGLTPSH
Sbjct: 640 LITVEEGSIGGFGSHVAHFLALDGLLDGKLKWRPLVLPDRYIDHGSPSVQLIEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           +AATV NILG  REAL+IMS
Sbjct: 700 VAATVLNILGNKREALQIMS 719


>gi|46410858|gb|AAS94123.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 720

 Score = 1084 bits (2803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/560 (93%), Positives = 542/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT+GLSGFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGA
Sbjct: 160 MHTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGG MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKRIGGSMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EVK TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFK SA TQS
Sbjct: 340 IAILKEVKGTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSAITQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKD+VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 460 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GV+LPPGNKGIPLEVGKG
Sbjct: 520 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVQLPPGNKGIPLEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYGTAVQSCLAA++L+E +GL +TVADARFCKPLDH LIRSLAK HEV
Sbjct: 580 RILIEGERVALLGYGTAVQSCLAAASLVEPHGLLITVADARFCKPLDHTLIRSLAKPHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FLA DGLLDG +KWRPLVLPDRYIDHGSP+ QL +AGLTPSH
Sbjct: 640 LITVEEGSIGGFGSHVAHFLALDGLLDGKLKWRPLVLPDRYIDHGSPSVQLIEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           +AATV NILG  REAL+IMS
Sbjct: 700 VAATVLNILGNKREALQIMS 719


>gi|408537471|gb|AFU75321.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Aquilaria sinensis]
          Length = 717

 Score = 1081 bits (2795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/560 (92%), Positives = 542/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKG++NNVVAVIGDGA
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGKRNNVVAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSNRPL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSNRPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+ GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL
Sbjct: 278 RELREVAKGVTKQLPGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQ K SA+TQS
Sbjct: 338 VAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPATGKQLKPSAKTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVD+D+VAIHAAMGGGTGLN FL RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAEVDQDIVAIHAAMGGGTGLNHFLHRFPARCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAI+DRPSCFRYPRGNG+GV+LPPGNKG PLE+GKG
Sbjct: 518 ACLPNMVVMAPSDEAELFHMVATAAAINDRPSCFRYPRGNGLGVQLPPGNKGTPLEIGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGER ALLGYGTAVQSC+AA++ +ES+GLR TVADARFCKPLDH LIR LAKSHEV
Sbjct: 578 RILIEGERAALLGYGTAVQSCIAAASSVESHGLRPTVADARFCKPLDHGLIRKLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS GGFGSHV QFLA DGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ+GLTP+H
Sbjct: 638 LITVEEGSTGGFGSHVAQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQSGLTPAH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAAT+FNILG TREALE+MS
Sbjct: 698 IAATLFNILGHTREALEVMS 717


>gi|449454454|ref|XP_004144970.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449473276|ref|XP_004153837.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449507648|ref|XP_004163093.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 718

 Score = 1080 bits (2794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/560 (92%), Positives = 546/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKRSESE+D FG GHSST+ISAGLGMAVGRDLKGRKNNV+AVIGDGA
Sbjct: 159 MSTIRQTNGLSGFTKRSESEFDSFGAGHSSTTISAGLGMAVGRDLKGRKNNVIAVIGDGA 218

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQSNRPL
Sbjct: 219 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPL 278

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL
Sbjct: 279 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 338

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+IL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQ K+ A TQS
Sbjct: 339 VSILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQQKAKAPTQS 398

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD++AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 399 YTTYFAEALIAEAERDKDIIAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 458

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM
Sbjct: 459 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 518

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDE ELF+MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP+EVGKG
Sbjct: 519 ACLPNMVVMAPSDETELFNMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPIEVGKG 578

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYGTAVQ+CLAA++++E +GLR+TVAD RFCKPLD ALIRSLAKSHE+
Sbjct: 579 RILLEGERVALLGYGTAVQNCLAAASMVERHGLRITVADGRFCKPLDRALIRSLAKSHEI 638

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV+QFLA DGLLDG++KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 639 LITVEEGSIGGFGSHVIQFLALDGLLDGSLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 698

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+LGQTREALEIM+
Sbjct: 699 IAATVFNMLGQTREALEIMT 718


>gi|343466207|gb|AEM42997.1| 1-deoxyxylulose-5-phosphate synthase [Siraitia grosvenorii]
          Length = 719

 Score = 1075 bits (2781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/560 (91%), Positives = 543/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKRSESE+DCFG GHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGA
Sbjct: 160 MSTIRQTNGLSGFTKRSESEFDCFGAGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+IL+EVK+T TTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQ KS   TQS
Sbjct: 340 VSILKEVKSTNTTGPVLIHVVTEKGRGYPYAERAADKYHGVTKFDPATGKQQKSKGATQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL+AEAEVDKD++AIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALVAEAEVDKDIIAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM
Sbjct: 460 ASEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEA LF+MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG+P+EVGKG
Sbjct: 520 ACLPNMVVMAPSDEAGLFNMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGVPVEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYGTAVQ+CL A++L+E +GLR+TVAD RFCKPLD ALIRSLAKSHE+
Sbjct: 580 RILLEGERVALLGYGTAVQNCLTAASLVERHGLRITVADGRFCKPLDRALIRSLAKSHEI 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV+QFLA DGLLDG ++WRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 640 LITVEEGSIGGFGSHVIQFLALDGLLDGNLRWRPLVLPDRYIDHGSPADQLAEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+LGQTREALEIMS
Sbjct: 700 IAATVFNMLGQTREALEIMS 719


>gi|30315812|sp|O78328.1|DXS_CAPAN RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; AltName:
           Full=CapTKT2; Flags: Precursor
 gi|3559816|emb|CAA75778.1| transketolase 2 [Capsicum annuum]
          Length = 719

 Score = 1070 bits (2768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/560 (92%), Positives = 551/560 (98%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGA
Sbjct: 160 MSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDN+QVSLPTATLDGP+PPVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           ++IL+EV++TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK SA+TQS
Sbjct: 340 ISILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGSAKTQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 460 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFH+VATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKG
Sbjct: 520 ACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYG+AVQ+CLAA+++LES GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 580 RILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE+GSIGGFGSHVVQF+A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 640 LVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+M+
Sbjct: 700 IAATVFNILGQTREALEVMT 719


>gi|124558735|gb|ABN13970.1| 1-deoxy-D-xylulose 5-phosphate synthase [Gossypium barbadense]
          Length = 720

 Score = 1070 bits (2766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/563 (92%), Positives = 546/563 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKG +N+VVAVIGDGA
Sbjct: 158 MHTMRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGERNHVVAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+IL+EVK TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK ++ TQS
Sbjct: 338 VSILKEVKTTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGNSATQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DK++VAIHAAMGGGTGLNLFLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAEADKNIVAIHAAMGGGTGLNLFLRRFPQRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV+LPPG KG+PLEVGKG
Sbjct: 518 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPPGKKGVPLEVGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+LIEGERVALLGYG+AVQSCLAA++LLES+GLRLTVADARFCKPLDHALIR LAKSHEV
Sbjct: 578 RVLIEGERVALLGYGSAVQSCLAAASLLESHGLRLTVADARFCKPLDHALIRKLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFLA DGLLDG VKWRPLVLPDRYIDHGSP DQLA+AGLTPSH
Sbjct: 638 LITVEEGSIGGFGSHVAQFLALDGLLDGKVKWRPLVLPDRYIDHGSPVDQLAEAGLTPSH 697

Query: 541 IAATVFNILGQTREALEIMSFKS 563
           IAATVFN+L Q REALE+MS ++
Sbjct: 698 IAATVFNVLEQKREALEVMSSRN 720


>gi|35187002|gb|AAQ84169.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pueraria montana var.
           lobata]
          Length = 717

 Score = 1068 bits (2763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/560 (92%), Positives = 545/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGA
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEA+NNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 218 MTAGQAYEALNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL EVK+TKTTGPVLIHV+TEKGRGYPYAEKAADKYHGV KFDP TGKQFKS A TQS
Sbjct: 338 VAILNEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVTKFDPPTGKQFKSKATTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAI+DRPSCFRYPRGNGIGV+LP GNKG PLE+GKG
Sbjct: 518 ACLPNMVVMAPSDEAELFHMVATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEV
Sbjct: 578 RILIEGERVALLGYGSAVQNCLAAASLVERHGLRLTVADARFCKPLDRSLIRSLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL+ AGLTPSH
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+MS
Sbjct: 698 IAATVFNILGQTREALEVMS 717


>gi|350539507|ref|NP_001234672.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
 gi|5059160|gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum]
          Length = 719

 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/560 (92%), Positives = 548/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGA
Sbjct: 160 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDN+QVSLPTATLDGP+ PVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EV++TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK+SA+TQS
Sbjct: 340 IAILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKASAKTQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 460 ACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKG
Sbjct: 520 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CL A+ +LES GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 580 RILIEGERVALLGYGSAVQNCLDAAIVLESRGLQVTVADARFCKPLDHALIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQF+A DGLLDG +KWRP+VLPDRYIDHGSP DQLA+AGLTPSH
Sbjct: 640 LITVEEGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+M+
Sbjct: 700 IAATVFNILGQTREALEVMT 719


>gi|256619604|emb|CAZ66648.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 precursor [Solanum
           lycopersicum]
          Length = 719

 Score = 1067 bits (2760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/560 (92%), Positives = 548/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGA
Sbjct: 160 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDN+QVSLPTATLDGP+ PVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EV++TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK+SA+TQS
Sbjct: 340 IAILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKASAKTQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 460 ACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKG
Sbjct: 520 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CL A+ +LES GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 580 RILIEGERVALLGYGSAVQNCLDAAIVLESRGLQVTVADARFCKPLDHALIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQF+A DGLLDG +KWRP+VLPDRYIDHGSP DQLA+AGLTPSH
Sbjct: 640 LITVEEGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+M+
Sbjct: 700 IAATVFNILGQTREALEVMT 719


>gi|357478563|ref|XP_003609567.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355510622|gb|AES91764.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 717

 Score = 1064 bits (2751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/560 (91%), Positives = 541/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESEYD FGTGHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGA
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN+PL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK T +TGPVLIHV+TEKGRGYPYAEKAADKYHGVAKFDP TGKQFK +A+TQS
Sbjct: 338 VAILKEVKTTNSTGPVLIHVITEKGRGYPYAEKAADKYHGVAKFDPPTGKQFKVAAKTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEA+ DKD++AIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVG+DGPTH GSFDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGVELP   KGIPLE+GKG
Sbjct: 518 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEV
Sbjct: 578 RILIEGERVALLGYGSAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL  AGLTPSH
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+MS
Sbjct: 698 IAATVFNILGQTREALEVMS 717


>gi|351725475|ref|NP_001236070.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
 gi|226536911|gb|ACO72582.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Glycine max]
          Length = 708

 Score = 1063 bits (2749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/560 (92%), Positives = 544/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESE+DCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGA
Sbjct: 149 MHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGA 208

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 209 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 268

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISGSGS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 269 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSGSSLFEELGLYYIGPVDGHNIDDL 328

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL EVK+TKTTGPVLIHV+TEKGRGYPYAEKAADKYHGV KFDP TGKQFKS A TQS
Sbjct: 329 VAILNEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVTKFDPPTGKQFKSKATTQS 388

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKDVVAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 389 YTTYFAEALIAEAEADKDVVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGL 448

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM
Sbjct: 449 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 508

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEA+LFHMVATAAAI+DRPSCFRYPRGNGIGV+LP GNKG PLE+GKG
Sbjct: 509 ACLPNMVVMAPSDEADLFHMVATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKG 568

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEV
Sbjct: 569 RILIEGERVALLGYGSAVQNCLAAASLVECHGLRLTVADARFCKPLDRSLIRSLAKSHEV 628

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL+ AGLTPSH
Sbjct: 629 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSH 688

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+L QTREALE+MS
Sbjct: 689 IAATVFNVLRQTREALEVMS 708


>gi|21322713|emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula]
          Length = 717

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/560 (90%), Positives = 541/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESEYD FGTGHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGA
Sbjct: 158 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN+PL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK T +TGPVLIHV+TEKGRGYPYA+KAADKYHGVAKFDP TGKQFK +A+TQS
Sbjct: 338 VAILKEVKTTNSTGPVLIHVITEKGRGYPYAQKAADKYHGVAKFDPPTGKQFKVAAKTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEA+ DKD++AIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVG+DGPTH GSFDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGVELP   KGIPLE+GKG
Sbjct: 518 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEV
Sbjct: 578 RILIEGERVALLGYGSAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL  AGLTPSH
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+MS
Sbjct: 698 IAATVFNILGQTREALEVMS 717


>gi|357478565|ref|XP_003609568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355510623|gb|AES91765.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 672

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/560 (91%), Positives = 541/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESEYD FGTGHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGA
Sbjct: 113 MHTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGA 172

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN+PL
Sbjct: 173 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPL 232

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 233 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDL 292

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK T +TGPVLIHV+TEKGRGYPYAEKAADKYHGVAKFDP TGKQFK +A+TQS
Sbjct: 293 VAILKEVKTTNSTGPVLIHVITEKGRGYPYAEKAADKYHGVAKFDPPTGKQFKVAAKTQS 352

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEA+ DKD++AIHAAMGGGTG+N+F RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 353 YTTYFAEALIAEAKADKDIIAIHAAMGGGTGMNIFHRRFPTRCFDVGIAEQHAVTFAAGL 412

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVG+DGPTH GSFDVTFM
Sbjct: 413 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGSDGPTHSGSFDVTFM 472

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGVELP   KGIPLE+GKG
Sbjct: 473 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVELPTEYKGIPLEIGKG 532

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CLAA++L+E +GLRLTVADARFCKPLD +LIRSLAKSHEV
Sbjct: 533 RILIEGERVALLGYGSAVQNCLAAASLVEQHGLRLTVADARFCKPLDRSLIRSLAKSHEV 592

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQL  AGLTPSH
Sbjct: 593 LITVEEGSIGGFGSHVAQFMALDGLLDGNLKWRPVVLPDRYIDHGSPADQLCMAGLTPSH 652

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+MS
Sbjct: 653 IAATVFNILGQTREALEVMS 672


>gi|301341852|gb|ADK73609.1| 1-D-deoxyxylulose 5-phosphate synthase [Solanum tuberosum]
          Length = 719

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/560 (91%), Positives = 547/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGA
Sbjct: 160 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDN+QVSLPTATLDGP+ PVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EV++TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK++A+TQS
Sbjct: 340 IAILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKANAKTQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQ AVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQRAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 460 ACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLEVGKG
Sbjct: 520 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CL A+ +LES G+++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 580 RILIEGERVALLGYGSAVQNCLDAAIVLESRGIQVTVADARFCKPLDHALIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQF+A DGLLDG +KWRP+VLPDRYIDHGSP DQLA+AGLTPSH
Sbjct: 640 LITVEEGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPVDQLAEAGLTPSH 699

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+M+
Sbjct: 700 IAATVFNILGQTREALEVMT 719


>gi|46488696|gb|AAS99588.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis
           guineensis]
          Length = 707

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/560 (90%), Positives = 538/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKRSESEYD FG GHSSTSISA LGMAVGRDLKGRKNNV+AVIGDGA
Sbjct: 148 MPTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAALGMAVGRDLKGRKNNVIAVIGDGA 207

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQS+RPL
Sbjct: 208 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSSRPL 267

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG MH+LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 268 RELREVAKGVTKQIGGSMHKLAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDL 327

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+EVK+TKTTGPV IHVVTEKGRGYPYAE+AADKYHGVAKFDP+TGKQFKS ++TQS
Sbjct: 328 VTILKEVKSTKTTGPVFIHVVTEKGRGYPYAERAADKYHGVAKFDPSTGKQFKSRSKTQS 387

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI+EAEVDKD+VAIHAAMGGGTGLN FLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 388 YTNYFAEALISEAEVDKDIVAIHAAMGGGTGLNYFLRRFPTRCFDVGIAEQHAVTFAAGL 447

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT+M
Sbjct: 448 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTYM 507

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVM PSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GV LP GNKG+PLEVGKG
Sbjct: 508 ACLPNMVVMTPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVPLPAGNKGVPLEVGKG 567

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG AVQ CLAA++LLE + L++TVADARFCKPLDHALIRSLA+SHE+
Sbjct: 568 RILIEGERVALLGYGAAVQGCLAAASLLEEHSLKVTVADARFCKPLDHALIRSLARSHEL 627

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 628 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 687

Query: 541 IAATVFNILGQTREALEIMS 560
           +AATVFN+LGQ REALEIMS
Sbjct: 688 VAATVFNMLGQAREALEIMS 707


>gi|386081792|gb|AFI98878.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
           somnifera]
 gi|386082787|gb|AFI98880.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Withania
           somnifera]
          Length = 717

 Score = 1062 bits (2747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/560 (91%), Positives = 547/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNV+AVIGDGA
Sbjct: 158 MSTLRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDN+QVSLPTATLDGP+PPVGALSSALSRLQSNRPL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           ++IL+EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFK  A+TQS
Sbjct: 338 ISILKEVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGIAKTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE +KD+VAIHAAMGGGTG+NLFL RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAEANKDIVAIHAAMGGGTGMNLFLGRFPTRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GN+G PLEVGKG
Sbjct: 518 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPAGNRGTPLEVGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYG+AVQ+CLAASA+LES+ L++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 578 RILVEGERVALLGYGSAVQNCLAASAVLESHCLQVTVADARFCKPLDRALIRSLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+M+
Sbjct: 698 IAATVFNILGQTREALEVMT 717


>gi|356563764|ref|XP_003550129.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 712

 Score = 1061 bits (2743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/560 (92%), Positives = 544/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESE+DCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGA
Sbjct: 153 MHTMRQTNGLSGFTKRSESEFDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 213 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISGSGS+LFEELGLYYIGPVDGHN++DL
Sbjct: 273 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSGSSLFEELGLYYIGPVDGHNINDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL EVK+T TTGPVLIHV+TEKGRGYPYAEKAADKYHGV KFDP TGKQFKS A T+S
Sbjct: 333 VAILNEVKSTNTTGPVLIHVITEKGRGYPYAEKAADKYHGVTKFDPPTGKQFKSKATTRS 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKDVVAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTTYFAEALIAEAEADKDVVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM
Sbjct: 453 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAI+DRPSCFRYPRGNGIGV+LP GNKG PLE+GKG
Sbjct: 513 ACLPNMVVMAPSDEAELFHMVATAAAINDRPSCFRYPRGNGIGVQLPTGNKGTPLEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQ+CLAA++L+E +GLR+TVADARFCKPLD +LIRSLAKSHEV
Sbjct: 573 RILIEGERVALLGYGSAVQNCLAAASLVEHHGLRVTVADARFCKPLDRSLIRSLAKSHEV 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGL+DG +KWRP+VLPDRYIDHGSPADQL+ AGLTPSH
Sbjct: 633 LITVEEGSIGGFGSHVAQFMALDGLIDGKLKWRPIVLPDRYIDHGSPADQLSLAGLTPSH 692

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+MS
Sbjct: 693 IAATVFNILGQTREALEVMS 712


>gi|193792541|gb|ACF21004.1| 1-deoxy-D-xylulose 5-phosphate synthase [Salvia miltiorrhiza]
          Length = 714

 Score = 1060 bits (2740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/560 (91%), Positives = 536/560 (95%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQT GLSGFTKRSES+YDCFG GHSST+ISAGLGMAVGRDLKGRK+NVVAVIGDGA
Sbjct: 155 MPSLRQTGGLSGFTKRSESDYDCFGAGHSSTTISAGLGMAVGRDLKGRKDNVVAVIGDGA 214

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGP  PVGALSSALSRLQSNRPL
Sbjct: 215 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPTAPVGALSSALSRLQSNRPL 274

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARG+ISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 275 RELREVAKGVTKQIGGPMHELAAKVDEYARGLISGSGSTLFEELGLYYIGPVDGHNLDDL 334

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
            AI  EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSSA TQ 
Sbjct: 335 TAIHREVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSAPTQP 394

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKD+VAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 395 YTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 454

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 455 ACEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 514

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELF+MVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG PLE+GKG
Sbjct: 515 ACLPNMVVMAPSDEAELFNMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGKPLEIGKG 574

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQSCLAA+AL+E+ GL+LTVADARFC PLDHALIRSLAKSHEV
Sbjct: 575 RILIEGERVALLGYGSAVQSCLAAAALVETRGLQLTVADARFCMPLDHALIRSLAKSHEV 634

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  F+A DGLLDG +KWRPLVLPDRYIDHG+P DQL +AGLTPSH
Sbjct: 635 LITVEEGSIGGFGSHVAHFMALDGLLDGNLKWRPLVLPDRYIDHGAPVDQLMEAGLTPSH 694

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILG+ REALEIMS
Sbjct: 695 IAATVFNILGKAREALEIMS 714


>gi|356546474|ref|XP_003541651.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 721

 Score = 1059 bits (2739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/560 (92%), Positives = 543/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQTDGL+GFTKRSES+YDCFGTGHSST+ISAGLGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 162 MHTMRQTDGLAGFTKRSESDYDCFGTGHSSTTISAGLGMAVGRDLKGDKNNVVAVIGDGA 221

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALS+LQSNRPL
Sbjct: 222 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSKLQSNRPL 281

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 282 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 341

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+IL EVK+TKTTGPVL+HVVTEKG GYPYAE+AADKYHGV KFDPATGKQFKS+A TQS
Sbjct: 342 VSILNEVKSTKTTGPVLLHVVTEKGHGYPYAERAADKYHGVTKFDPATGKQFKSNAATQS 401

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+V IHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 402 YTTYFAEALIAEAEADKDIVGIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGL 461

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 462 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 521

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKGIPLE+GKG
Sbjct: 522 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPLGNKGIPLEIGKG 581

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG+AVQSCLAA++LLE +GLR TVADARFCKPLD +LIRSLA+SHEV
Sbjct: 582 RILIEGERVALLGYGSAVQSCLAAASLLEHHGLRATVADARFCKPLDRSLIRSLAQSHEV 641

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQF+A DGLLDG +KWRP+VLPD YIDHGSP DQL+ AGLTPSH
Sbjct: 642 LITVEEGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDCYIDHGSPVDQLSAAGLTPSH 701

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+LGQTREALE+M+
Sbjct: 702 IAATVFNLLGQTREALEVMT 721


>gi|194396283|gb|ACF60511.1| 1-D-deoxyxylulose 5-phosphate synthase [Nicotiana tabacum]
          Length = 717

 Score = 1058 bits (2736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/560 (91%), Positives = 545/560 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGL+GFTKRSES YDCFGTGHSST+ISAGLGMAVGRDLKG+ NNV+AVIGDGA
Sbjct: 158 MSTLRQTDGLAGFTKRSESVYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDN+QVSLPTATLDGP PPVGALSSALSRLQSNRPL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPAPPVGALSSALSRLQSNRPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           ++IL+EV++TKTTGPVLIHV+TEKGRGYPYAE+AADKYHGVAKFDPATGKQFK SA+TQS
Sbjct: 338 ISILKEVRSTKTTGPVLIHVITEKGRGYPYAERAADKYHGVAKFDPATGKQFKVSAKTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDE ELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKG PLEVGKG
Sbjct: 518 ACLPNMVVMAPSDETELFHMVATAAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYG+AVQ+CLAA+A+LE+ GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 578 RILVEGERVALLGYGSAVQNCLAAAAVLETRGLQVTVADARFCKPLDGALIRSLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+M+
Sbjct: 698 IAATVFNILGQTREALEVMT 717


>gi|255068751|emb|CBA12009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nicotiana tabacum]
          Length = 717

 Score = 1054 bits (2725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/560 (90%), Positives = 543/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKG+ NNV+AVIGDGA
Sbjct: 158 MSTLRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDN+QVSLPTATLDGP PPVGALS ALSRLQSNRPL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPAPPVGALSRALSRLQSNRPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           ++IL+EV++TKTTGPVLIHV+TEKGRGYPYAE+AADKYHGVAKFDPATGKQFK SA+TQS
Sbjct: 338 ISILKEVRSTKTTGPVLIHVITEKGRGYPYAERAADKYHGVAKFDPATGKQFKVSAKTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+N+F RRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNIFHRRFPNRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 458 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDE ELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKG PLEVGKG
Sbjct: 518 ACLPNMVVMAPSDETELFHMVATAAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYG+AVQ+CLAA+A+L + GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 578 RILVEGERVALLGYGSAVQNCLAAAAVLVTRGLQVTVADARFCKPLDGALIRSLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQTREALE+M+
Sbjct: 698 IAATVFNILGQTREALEVMT 717


>gi|408833344|gb|AFU93068.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 712

 Score = 1051 bits (2718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/560 (91%), Positives = 542/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT+GL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLK RKNNVV+VIGDGA
Sbjct: 153 MHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKRRKNNVVSVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPL
Sbjct: 213 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPL 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIG PMH+LA+KVDEYARG+ISGSGSTLFEELGLYYIGPVDGH++DDL
Sbjct: 273 RELREVAKGVTKQIGWPMHDLASKVDEYARGLISGSGSTLFEELGLYYIGPVDGHSIDDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+T+TTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATG+QFK+S +TQS
Sbjct: 333 VAILKEVKSTRTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPATGQQFKASVKTQS 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +TTYFAEALIAEAE DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 393 FTTYFAEALIAEAEADKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 453 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV+LPPGNKG+PLEVGKG
Sbjct: 513 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVDLPPGNKGVPLEVGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYGTAV+SCLAA+++++  GL LTV DARFCKPLD +LIRSLAKSHE 
Sbjct: 573 RILIEGERVALLGYGTAVRSCLAAASIVKPRGLNLTVVDARFCKPLDCSLIRSLAKSHEF 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FLA DGLLDG +KWRPLVLPDRYIDHGSPADQL +AGLTPSH
Sbjct: 633 LITVEEGSIGGFGSHVAHFLALDGLLDGNLKWRPLVLPDRYIDHGSPADQLTEAGLTPSH 692

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILG+TR ALEIMS
Sbjct: 693 IAATVFNILGKTRGALEIMS 712


>gi|237625980|gb|ACR02668.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Amomum
           villosum]
          Length = 715

 Score = 1047 bits (2707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/560 (88%), Positives = 536/560 (95%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGLSGFTKRSES+YD FG GHSSTSISA LGMAVGRDL GRKNNV+AVIGDG+
Sbjct: 156 MQTLRQTDGLSGFTKRSESDYDAFGAGHSSTSISAALGMAVGRDLMGRKNNVIAVIGDGS 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQS++PL
Sbjct: 216 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSSKPL 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGG MHE+AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 276 RELREVAKGVTKKIGGSMHEIAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSS++T+S
Sbjct: 336 VTILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSSQTKS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA+AL+AEAEVDKD+VAIHAAMGGGTGLN FLR+FP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTNYFADALVAEAEVDKDIVAIHAAMGGGTGLNYFLRKFPDRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
            CEGLKPFCAIYSSF+QRAYDQV+HDVDLQKLPVRFA+DRAGLVGADGPTH G+FDV +M
Sbjct: 456 TCEGLKPFCAIYSSFLQRAYDQVIHDVDLQKLPVRFALDRAGLVGADGPTHSGAFDVAYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GV L PGNKG+PLE+GKG
Sbjct: 516 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVPLLPGNKGVPLEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYGTAVQSCLAA++++E  GL++TVADARFCKPLD +LIRSLAKSHEV
Sbjct: 576 RILIEGERVALLGYGTAVQSCLAAASMVELQGLKITVADARFCKPLDRSLIRSLAKSHEV 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV QF+A DGLLDG +KWRPLVLPDRYIDHGSP DQLA+AGLTPSH
Sbjct: 636 LITVEEGSIGGFSSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPRDQLAEAGLTPSH 695

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+VFN++GQTREAL++MS
Sbjct: 696 IAASVFNVIGQTREALKMMS 715


>gi|8000868|gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phosphate synthase [Artemisia annua]
          Length = 713

 Score = 1045 bits (2702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/560 (90%), Positives = 540/560 (96%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT+GL+GFTKRSESE+DCFGTGHSST+ISAGLGMAVGRDLKG  N+VVA+IGDGA
Sbjct: 154 MHTIRQTNGLAGFTKRSESEHDCFGTGHSSTTISAGLGMAVGRDLKGGTNDVVAIIGDGA 213

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPL
Sbjct: 214 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPL 273

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAK VTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH++DDL
Sbjct: 274 RELREVAKEVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIDDL 333

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+TKTTGPVLIHV+TEKGRGYPYAEKAADKYHGV KFDPATGKQFKSSA TQS
Sbjct: 334 VAILKEVKSTKTTGPVLIHVITEKGRGYPYAEKAADKYHGVGKFDPATGKQFKSSAPTQS 393

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DK +V IHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 394 YTTYFAEALIAEAEADKKIVGIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGL 453

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH GSFDVTFM
Sbjct: 454 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHSGSFDVTFM 513

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELF+MVATAAAIDDRPSCFRYPRGNGIGV LPPGNKG+PLEVGKG
Sbjct: 514 ACLPNMVVMAPSDEAELFNMVATAAAIDDRPSCFRYPRGNGIGVPLPPGNKGVPLEVGKG 573

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI++EG+RVALLGYGTAVQSC+AA+ +++  GL +TVADARFCKPLDH+LIR+LAK+HEV
Sbjct: 574 RIMLEGQRVALLGYGTAVQSCMAAATIVQERGLNITVADARFCKPLDHSLIRALAKTHEV 633

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FLA DGLLDG +KWRPLVLPDRYIDHG+PADQLA+AGLTPSH
Sbjct: 634 LITVEEGSIGGFGSHVAHFLALDGLLDGNLKWRPLVLPDRYIDHGAPADQLAEAGLTPSH 693

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+LGQTREALE+MS
Sbjct: 694 IAATVFNVLGQTREALEVMS 713


>gi|297804692|ref|XP_002870230.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316066|gb|EFH46489.1| hypothetical protein ARALYDRAFT_493326 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score = 1044 bits (2699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/556 (89%), Positives = 531/556 (95%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKR ESE+DCFGTGHSST+ISAGLGMAVGRDLKG+ NNVVAVIGDGA
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGA 220

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  L
Sbjct: 221 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPAL 280

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKG+TKQIGGPMH+LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 281 RELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDL 340

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+T+TTGPVLIHVVTEKGRGYPYAE+A DKYHGV KFDPATGKQFKS+ +TQS
Sbjct: 341 VAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGKQFKSTNKTQS 400

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL+AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 401 YTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 460

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 461 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 520

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEA+LF+MVATAAAIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKG
Sbjct: 521 ACLPNMIVMAPSDEADLFNMVATAAAIDDRPSCFRYPRGNGIGVALPPGNKGVPVEIGKG 580

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVALLGYG+AVQSCL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 581 RILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEV 640

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSH
Sbjct: 641 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSH 700

Query: 541 IAATVFNILGQTREAL 556
           IAAT  N++G  REAL
Sbjct: 701 IAATALNLIGAPREAL 716


>gi|30144404|gb|AAP14353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
          Length = 691

 Score = 1043 bits (2698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/560 (89%), Positives = 530/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGL GFTKRSES YDCFG GHSST+ISAGLGMAVGRDL+GRKN+VVAVIGDGA
Sbjct: 132 MPTLRQTDGLCGFTKRSESNYDCFGAGHSSTTISAGLGMAVGRDLQGRKNHVVAVIGDGA 191

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPL
Sbjct: 192 MIAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPL 251

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG MHELAAKVDEYARG+ISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 252 RELREVAKGVTKQIGGSMHELAAKVDEYARGLISGSGSTLFEELGLYYIGPVDGHNIDDL 311

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
            AIL+EVK+TKTTGPV IHVVTEKGRGY YAEKAADKYHGVAKFDPATGKQFKSS  TQ+
Sbjct: 312 TAILKEVKSTKTTGPVSIHVVTEKGRGYSYAEKAADKYHGVAKFDPATGKQFKSSTPTQA 371

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE D  +VAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 372 YTTYFAEALIAEAEQDNIIVAIHAAMGGGTGLNLFDRRFPTRCFDVGIAEQHAVTFAAGL 431

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 432 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 491

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE+GKG
Sbjct: 492 ACLPNMVVMAPADEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEIGKG 551

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYGTAVQSC+ A+AL+E +GL+LTVADARFCKPLD  LIR LA SHEV
Sbjct: 552 RILLEGERVALLGYGTAVQSCMTAAALMEPHGLQLTVADARFCKPLDQGLIRRLANSHEV 611

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGF +HV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQL +AGLT  H
Sbjct: 612 LITVEEGAVGGFAAHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLMEAGLTSHH 671

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILG+ REAL+IMS
Sbjct: 672 IAATVFNILGKAREALQIMS 691


>gi|155369183|dbj|BAF75640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Croton stellatopilosus]
          Length = 720

 Score = 1043 bits (2697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/560 (89%), Positives = 533/560 (95%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKR+ESE+DCFGTGHSST+ISAGLGMAVGRDLK RKNNVVAVIGDGA
Sbjct: 160 MRTIRQTNGLSGFTKRAESEHDCFGTGHSSTTISAGLGMAVGRDLKERKNNVVAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE+AKGVTKQIGG MHELAAKVDEYARGMIS SGS+LFEELGLYYIGPVDGHN++DL
Sbjct: 280 RELREIAKGVTKQIGGQMHELAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHNIEDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+EVK+TK+TGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFKS   TQS
Sbjct: 340 VDILKEVKSTKSTGPVLIHVVTEKGRGYPYAERAADKYHGVTKFDPATGKQFKSGGSTQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKD+VAIHAAMGGGTGLNLF RRFP +CFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFHRRFPNKCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGL+GADGPTHCG+FDVTFM
Sbjct: 460 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLIGADGPTHCGAFDVTFM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           AC PNMVVMAPS+EAELF+MVATAAAIDDRPSCFRYPRGNGIGV LPPGNKGIP EVGKG
Sbjct: 520 ACPPNMVVMAPSNEAELFNMVATAAAIDDRPSCFRYPRGNGIGVPLPPGNKGIPXEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYG AVQ+CLAA++L+E+ GLR+TVADARFCKPLD +LIRSLAKSHEV
Sbjct: 580 RILIEGERVALLGYGAAVQNCLAAASLVETPGLRVTVADARFCKPLDQSLIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  F+A +GLLDG +KWRPLV PDRYI+ GSPADQL +AGLTPS 
Sbjct: 640 LITVEEGSIGGFGSHVAHFMALNGLLDGXLKWRPLVXPDRYIEXGSPADQLIEAGLTPSX 699

Query: 541 IAATVFNILGQTREALEIMS 560
           IAAT+FNILG  REAL+IMS
Sbjct: 700 IAATIFNILGNKREALQIMS 719


>gi|340764673|gb|AEK69518.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase 1 [Alpinia
           officinarum]
          Length = 715

 Score = 1041 bits (2692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/560 (88%), Positives = 534/560 (95%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGLSGFTKRSES+YD FG GHSSTSISA LGMAVGRDL GRKNNV+AVIGDGA
Sbjct: 156 MQTLRQTDGLSGFTKRSESDYDAFGAGHSSTSISAALGMAVGRDLMGRKNNVIAVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSS LSRLQS++PL
Sbjct: 216 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSTLSRLQSSKPL 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKG+TK+IGG MHE+AAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 276 RELREVAKGMTKRIGGSMHEIAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGV +FDPATGKQFKSS++T+S
Sbjct: 336 VTILKEVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVTRFDPATGKQFKSSSQTKS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA+AL+AEAEVDKD+VAIHAAMGGGTGLN FLR+FP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTNYFADALVAEAEVDKDIVAIHAAMGGGTGLNHFLRKFPDRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
            CEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFA+DRAGLVGADGPTH G+FDV +M
Sbjct: 456 TCEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHSGAFDVAYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GV L PGNKG+PLE+GKG
Sbjct: 516 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGVGVPLLPGNKGVPLEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYGTAVQSCLAA +++E  GL++TVADARFCKPLD +LIRSLAKSHEV
Sbjct: 576 RILIEGERVALLGYGTAVQSCLAAXSMVELQGLKITVADARFCKPLDRSLIRSLAKSHEV 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV QF+A DGLLDG +KWRPLVLPDRYIDHGSP DQLA+AGLTPSH
Sbjct: 636 LITVEEGSIGGFSSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPRDQLAEAGLTPSH 695

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+VFNI+GQTREAL++MS
Sbjct: 696 IAASVFNIIGQTREALKMMS 715


>gi|15234642|ref|NP_193291.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
 gi|13124705|sp|Q38854.2|DXS_ARATH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; AltName:
           Full=Protein CLOROPLASTOS ALTERADOS 1; Flags: Precursor
 gi|5281019|emb|CAB45992.1| DEF (CLA1) protein [Arabidopsis thaliana]
 gi|7268304|emb|CAB78598.1| DEF (CLA1) protein [Arabidopsis thaliana]
 gi|26983842|gb|AAN86173.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
 gi|332658225|gb|AEE83625.1| Deoxyxylulose-5-phosphate synthase [Arabidopsis thaliana]
 gi|392931109|gb|AFM91070.1| 1-deoxy-D-xylulose 5-phosphate synthase [synthetic construct]
          Length = 717

 Score = 1040 bits (2689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/556 (89%), Positives = 530/556 (95%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKR ESE+DCFGTGHSST+ISAGLGMAVGRDLKG+ NNVVAVIGDGA
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGA 220

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  L
Sbjct: 221 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPAL 280

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKG+TKQIGGPMH+LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 281 RELREVAKGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDL 340

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+T+TTGPVLIHVVTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++ +TQS
Sbjct: 341 VAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQS 400

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL+AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 401 YTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 460

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 461 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 520

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEA+LF+MVATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKG
Sbjct: 521 ACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKG 580

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVALLGYG+AVQSCL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 581 RILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEV 640

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSH
Sbjct: 641 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSH 700

Query: 541 IAATVFNILGQTREAL 556
           IAAT  N++G  REAL
Sbjct: 701 IAATALNLIGAPREAL 716


>gi|218196788|gb|EEC79215.1| hypothetical protein OsI_19939 [Oryza sativa Indica Group]
          Length = 720

 Score = 1039 bits (2686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/560 (89%), Positives = 529/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKRSESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 157 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 216

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPL
Sbjct: 217 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPL 276

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 277 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 336

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 337 ITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSLAKTLS 396

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  VVAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 397 YTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 456

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 457 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 516

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP  KG+PLEVGKG
Sbjct: 517 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKG 576

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+EGERVALLGYG+AVQ CLAA++L+E +GL++TVADARFCKPLD ALIR LA SHEV
Sbjct: 577 RVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQALIRRLASSHEV 636

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 637 LLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 696

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+LGQ REAL IM+
Sbjct: 697 IAATVFNVLGQAREALAIMT 716


>gi|91771913|gb|ABE60813.1| CLA1-like protein [Brassica rapa]
          Length = 716

 Score = 1038 bits (2685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/556 (89%), Positives = 529/556 (95%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKR ESE+DCFGTGHSST+ISAGL MAVGRDLKG+ NNVVAVIGDGA
Sbjct: 160 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLRMAVGRDLKGKNNNVVAVIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  L
Sbjct: 220 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPAL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMH+LAAKVDEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 280 RELREVAKGVTKQIGGPMHQLAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDL 339

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+ +TTGPVLIHV+TEKGRGYPYAE+A DKYHGV KFDPATGKQFK++ +TQS
Sbjct: 340 VAILKEVKSARTTGPVLIHVITEKGRGYPYAERADDKYHGVVKFDPATGKQFKTTNKTQS 399

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL+AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 400 YTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 459

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 460 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 519

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF++VATAAAIDDRPSCFRYPRGNGIGV LPPGNKG+P+EVGKG
Sbjct: 520 ACLPNMIVMAPSDEAELFNIVATAAAIDDRPSCFRYPRGNGIGVALPPGNKGVPVEVGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVALLGYG+AVQSCL A+ +L+  GL +TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 580 RILKEGERVALLGYGSAVQSCLGAAVMLQERGLNVTVADARFCKPLDRALIRSLAKSHEV 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHGSPADQ+A+AGL PSH
Sbjct: 640 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGSPADQMAEAGLMPSH 699

Query: 541 IAATVFNILGQTREAL 556
           IAAT  N++G  REAL
Sbjct: 700 IAATALNLIGAPREAL 715


>gi|357133711|ref|XP_003568467.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Brachypodium distachyon]
          Length = 706

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/560 (88%), Positives = 528/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGF KRSESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 143 MPTMRQTNGLSGFVKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGAKNNVVAVIGDGA 202

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALS ALS+LQS+RPL
Sbjct: 203 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSGALSKLQSSRPL 262

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 263 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSSLFEELGLYYIGPVDGHNIDDL 322

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL EVK TKTTGPVLIHVVTEKGRGYPYAE+A+DKYHGVAKFDPATGKQFKS A+T S
Sbjct: 323 ITILREVKGTKTTGPVLIHVVTEKGRGYPYAERASDKYHGVAKFDPATGKQFKSPAKTLS 382

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 383 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 442

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 443 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 502

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL +MVATAAAIDDRPSCFRYPRGNGIGV LPP  KGIPLEVGKG
Sbjct: 503 ACLPNMVVMAPSDEAELLNMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGIPLEVGKG 562

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYG+AVQ C+AAS+++E +GLR+TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 563 RILMEGERVALLGYGSAVQYCVAASSIVEEHGLRVTVADARFCKPLDHALIRSLAKSHEV 622

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPD+YIDHGSPADQL +AGLTPSH
Sbjct: 623 IITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPVVLPDKYIDHGSPADQLVEAGLTPSH 682

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQ REAL IM+
Sbjct: 683 IAATVFNILGQAREALAIMT 702


>gi|115463849|ref|NP_001055524.1| Os05g0408900 [Oryza sativa Japonica Group]
 gi|90110016|sp|O22567.2|DXS1_ORYSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; Flags:
           Precursor
 gi|49328155|gb|AAT58851.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|113579075|dbj|BAF17438.1| Os05g0408900 [Oryza sativa Japonica Group]
 gi|215694297|dbj|BAG89290.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215740838|dbj|BAG96994.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222631568|gb|EEE63700.1| hypothetical protein OsJ_18518 [Oryza sativa Japonica Group]
          Length = 720

 Score = 1037 bits (2682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/560 (89%), Positives = 528/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKRSESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 157 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 216

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPL
Sbjct: 217 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPL 276

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 277 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 336

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 337 ITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 396

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  VVAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 397 YTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 456

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 457 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 516

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP  KG+PLEVGKG
Sbjct: 517 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKG 576

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+EGERVALLGYG+AVQ CLAA++L+E +GL++TVADARFCKPLD  LIR LA SHEV
Sbjct: 577 RVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEV 636

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 637 LLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 696

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+LGQ REAL IM+
Sbjct: 697 IAATVFNVLGQAREALAIMT 716


>gi|1399261|gb|AAC49368.1| DEF [Arabidopsis thaliana]
          Length = 717

 Score = 1036 bits (2678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/556 (88%), Positives = 528/556 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKR ESE+DCFGTGHSST+ISAGLGMAVGRDLKG+ NNVVAVIGDGA
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGA 220

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  L
Sbjct: 221 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPAL 280

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKG+TKQIGGPMH+LAAKVD YARGMISG+GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 281 RELREVAKGMTKQIGGPMHQLAAKVDVYARGMISGTGSSLFEELGLYYIGPVDGHNIDDL 340

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+T+TTGPVLIHVVTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++  TQS
Sbjct: 341 VAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNETQS 400

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL+AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 401 YTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 460

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 461 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 520

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEA+LF+MVATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKG
Sbjct: 521 ACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKG 580

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVALLGYG+AVQSCL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 581 RILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEV 640

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSH
Sbjct: 641 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSH 700

Query: 541 IAATVFNILGQTREAL 556
           IAAT  N++G  REAL
Sbjct: 701 IAATALNLIGAPREAL 716


>gi|242090511|ref|XP_002441088.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
 gi|241946373|gb|EES19518.1| hypothetical protein SORBIDRAFT_09g020140 [Sorghum bicolor]
          Length = 722

 Score = 1035 bits (2677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/560 (88%), Positives = 531/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GL+GFTKR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 159 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 218

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPL
Sbjct: 219 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPL 278

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 279 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDL 338

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL +VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 339 ITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 398

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 399 YTNYFAESLIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGL 458

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 459 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 518

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP  KG PLEVGKG
Sbjct: 519 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGTPLEVGKG 578

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYG+AVQ CLAA++L+E +GLR+TVADARFCKPLDHALIRSLA+SHEV
Sbjct: 579 RILMEGDRVALLGYGSAVQYCLAAASLVERHGLRVTVADARFCKPLDHALIRSLARSHEV 638

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 639 IITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 698

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFNILGQ REAL IM+
Sbjct: 699 IAATVFNILGQNREALAIMA 718


>gi|413945326|gb|AFW77975.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
          Length = 719

 Score = 1033 bits (2672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/560 (88%), Positives = 530/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GL+GFTKR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPL
Sbjct: 216 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPL 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 276 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL +VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 336 ITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 456 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKG
Sbjct: 516 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 576 RILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEV 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 636 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 695

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+VFNILGQ REAL IM+
Sbjct: 696 IAASVFNILGQNREALAIMA 715


>gi|2894445|emb|CAA74713.1| transketolase [Arabidopsis thaliana]
          Length = 739

 Score = 1033 bits (2671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/556 (88%), Positives = 528/556 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKR ESE+DCFGTGHSST+ISAGLGMA+GRDLKG+ NNVVAVIGDGA
Sbjct: 183 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAIGRDLKGKNNNVVAVIGDGA 242

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQSN  L
Sbjct: 243 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPAL 302

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKG+TKQIGGPMH++AAKVD YARGMISG+GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 303 RELREVAKGMTKQIGGPMHQVAAKVDVYARGMISGTGSSLFEELGLYYIGPVDGHNIDDL 362

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+T+TTGPVLIHVVTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++  TQS
Sbjct: 363 VAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNETQS 422

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL+AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 423 YTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGL 482

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 483 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 542

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEA+LF+MVATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKG
Sbjct: 543 ACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKG 602

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVALLGYG+AVQSCL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 603 RILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEV 662

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSH
Sbjct: 663 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSH 722

Query: 541 IAATVFNILGQTREAL 556
           IAAT  N++G  REAL
Sbjct: 723 IAATALNLIGAPREAL 738


>gi|145652152|gb|ABP88134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 719

 Score = 1033 bits (2671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/560 (88%), Positives = 530/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GL+GFTKR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPL
Sbjct: 216 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPL 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 276 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL +VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 336 ITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 456 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKG
Sbjct: 516 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 576 RILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEV 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSH+ QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 636 LITVEEGSIGGFGSHIAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 695

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+VFNILGQ REAL IM+
Sbjct: 696 IAASVFNILGQNREALAIMA 715


>gi|194701502|gb|ACF84835.1| unknown [Zea mays]
          Length = 564

 Score = 1033 bits (2670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/560 (88%), Positives = 530/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GL+GFTKR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 1   MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 60

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPL
Sbjct: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPL 120

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 121 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDL 180

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL +VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 181 ITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 240

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 241 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGL 300

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 301 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 360

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKG
Sbjct: 361 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKG 420

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 421 RILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEV 480

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 481 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 540

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+VFNILGQ REAL IM+
Sbjct: 541 IAASVFNILGQNREALAIMA 560


>gi|195612150|gb|ACG27905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zea mays]
          Length = 719

 Score = 1032 bits (2669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/560 (88%), Positives = 529/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GL+GFTKR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPL
Sbjct: 216 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPL 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 276 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL +VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 336 ITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 456 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKG
Sbjct: 516 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 576 RILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEV 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 636 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 695

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+VFNILGQ REAL IM+
Sbjct: 696 IAASVFNILGQNREALAIMA 715


>gi|256355109|ref|NP_001157805.1| deoxy xylulose synthase 1 [Zea mays]
 gi|253558917|gb|ACT32136.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 719

 Score = 1031 bits (2667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/560 (88%), Positives = 529/560 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GL+GFTKR+ESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 156 MPTMRQTNGLAGFTKRAESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPL
Sbjct: 216 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPL 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVT+QIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 276 RELREVAKGVTRQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL +VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 336 ITILNDVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 456 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKG
Sbjct: 516 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 576 RILLEGDRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEV 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 636 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 695

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+VFNILGQ REAL IM+
Sbjct: 696 IAASVFNILGQNREALAIMA 715


>gi|302805853|ref|XP_002984677.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
 gi|300147659|gb|EFJ14322.1| hypothetical protein SELMODRAFT_268893 [Selaginella moellendorffii]
          Length = 636

 Score = 1026 bits (2652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/561 (86%), Positives = 525/561 (93%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT+GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL G KN+V++VIGDGA
Sbjct: 76  MHTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDLMGNKNHVISVIGDGA 135

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS+MIVILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPL
Sbjct: 136 MTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPL 195

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH+++DL
Sbjct: 196 RELREVAKGVTKQLGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIEDL 255

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+EVKNT+TTGPVLIH+VTEKGRGYPYAE+A+DKYHGV KFDPATGKQFK    TQ+
Sbjct: 256 VTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFDPATGKQFKGKTATQA 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVD  ++AIHAAMGGGTGLN+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 316 YTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQKRFPDRCFDVGIAEQHAVTFAAGL 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 376 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV LPPGNKGIPLEVGKG
Sbjct: 436 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVVLPPGNKGIPLEVGKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG +VALLGYGT VQSCLAA ALL S GL  TVADARFCKPLD  LIR LA+ HEV
Sbjct: 496 RILVEGSKVALLGYGTMVQSCLAAQALLASCGLPATVADARFCKPLDRDLIRQLAREHEV 555

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDGT+KWRPLVLPDRYIDHGSP DQ+ +AGLT +H
Sbjct: 556 LITVEEGSIGGFGSHVAQFMALDGLLDGTLKWRPLVLPDRYIDHGSPNDQMTEAGLTAAH 615

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAAT  +I+G+TR+ALEIMS 
Sbjct: 616 IAATALDIMGRTRDALEIMSL 636


>gi|326491509|dbj|BAJ94232.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326510627|dbj|BAJ87530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 712

 Score = 1025 bits (2651), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/563 (87%), Positives = 526/563 (93%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGF KRSESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 149 MPTMRQTNGLSGFIKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGAKNNVVAVIGDGA 208

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALS ALS+LQS+RPL
Sbjct: 209 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSGALSKLQSSRPL 268

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HE+AAKVDEYARGMISGSGS+LFEELGLYYIGPVDGHN+DDL
Sbjct: 269 RELREVAKGVTKQIGGSVHEIAAKVDEYARGMISGSGSSLFEELGLYYIGPVDGHNIDDL 328

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL EVK TKTTGPVLIHV+TEKGRGYPYAE+A+DKYHGVAKFDPATGKQFK  A+T S
Sbjct: 329 ITILREVKGTKTTGPVLIHVITEKGRGYPYAERASDKYHGVAKFDPATGKQFKVPAKTLS 388

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  +VAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 389 YTNYFAEALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 448

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 449 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 508

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL +MVATAAAIDDRPSCFRYPRGNGIGV LP   KG  +EVGKG
Sbjct: 509 ACLPNMVVMAPSDEAELLNMVATAAAIDDRPSCFRYPRGNGIGVPLPENYKGTAIEVGKG 568

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+IEGERVALLGYG+AVQ C+AAS+++  +GLR+TVADARFCKPLDHALIRSLAKSHEV
Sbjct: 569 RIMIEGERVALLGYGSAVQYCMAASSIVAQHGLRVTVADARFCKPLDHALIRSLAKSHEV 628

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+VLPD+YIDHGSPADQLA+AGLTPSH
Sbjct: 629 IITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPVVLPDKYIDHGSPADQLAEAGLTPSH 688

Query: 541 IAATVFNILGQTREALEIMSFKS 563
           IAATVFNILGQ REAL IM+ ++
Sbjct: 689 IAATVFNILGQAREALAIMTVQN 711


>gi|302793999|ref|XP_002978764.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
 gi|300153573|gb|EFJ20211.1| hypothetical protein SELMODRAFT_268187 [Selaginella moellendorffii]
          Length = 636

 Score = 1025 bits (2650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/561 (86%), Positives = 524/561 (93%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT+GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL G KN+V++VIGDGA
Sbjct: 76  MHTMRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVARDLMGNKNHVISVIGDGA 135

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS+MIVILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPL
Sbjct: 136 MTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPL 195

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+GG MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH+++DL
Sbjct: 196 RELREVAKGVTKQLGGQMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIEDL 255

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+EVKNT+TTGPVLIH+VTEKGRGYPYAE+A+DKYHGV KFDPATGKQFK    TQ+
Sbjct: 256 VTILKEVKNTRTTGPVLIHIVTEKGRGYPYAERASDKYHGVVKFDPATGKQFKGKTATQA 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVD  ++AIHAAMGGGTGLN+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 316 YTTYFAEALIAEAEVDNGIIAIHAAMGGGTGLNMFQKRFPDRCFDVGIAEQHAVTFAAGL 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 376 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV LPPGNKGIPLEVGKG
Sbjct: 436 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVVLPPGNKGIPLEVGKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG +VALLGYGT VQSCLAA ALL S GL  TVADARFCKPLD  LIR LA+ HEV
Sbjct: 496 RILVEGSKVALLGYGTMVQSCLAAQALLASCGLPATVADARFCKPLDRDLIRQLAREHEV 555

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDGT+KWRPLVLPDRYIDHGSP DQ+ +AGLT +H
Sbjct: 556 LITVEEGSIGGFGSHVAQFMALDGLLDGTLKWRPLVLPDRYIDHGSPNDQMTEAGLTAAH 615

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAAT  +I+G+TR+ALEIMS 
Sbjct: 616 IAATALDIMGRTRDALEIMSL 636


>gi|224102539|ref|XP_002312717.1| predicted protein [Populus trichocarpa]
 gi|222852537|gb|EEE90084.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score = 1017 bits (2630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/581 (87%), Positives = 535/581 (92%), Gaps = 21/581 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT+GL+GFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGR NNVVAVIGDGA
Sbjct: 132 MHTIRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRANNVVAVIGDGA 191

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPL
Sbjct: 192 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPL 251

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 252 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 311

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQ K+SA TQS
Sbjct: 312 IAILKEVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVNKFDPATGKQSKASASTQS 371

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 372 YTTYFAEALIAEAEADKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 431

Query: 301 ACEGLKPFCAIYSSFMQ-RAYDQ---------VVHDVD-----------LQKLPVRFAMD 339
           ACEGLKPFCAIYS F+    YD          ++ D D             KLPVRFAMD
Sbjct: 432 ACEGLKPFCAIYSFFLLILLYDNTQQYLVGIILLPDTDSSPHVDTIINVKMKLPVRFAMD 491

Query: 340 RAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRG 399
           RAGLVGADGPTHCG+FDVT+MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRG
Sbjct: 492 RAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRG 551

Query: 400 NGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVAD 459
           NG+GV+LPP NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAA++L+E +G+ LTVAD
Sbjct: 552 NGVGVQLPPENKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAAASLVERHGIHLTVAD 611

Query: 460 ARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPD 519
           ARFCKPLD+ALIRSLAKSHEVLITVEEGSIGGFGSHV  FLA DGLLDG +KWRP+VLPD
Sbjct: 612 ARFCKPLDNALIRSLAKSHEVLITVEEGSIGGFGSHVAHFLALDGLLDGKLKWRPVVLPD 671

Query: 520 RYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 560
           RYIDHGSPADQL +AGLTPSHIAATVFNILGQ R +LEIMS
Sbjct: 672 RYIDHGSPADQLVEAGLTPSHIAATVFNILGQRRNSLEIMS 712


>gi|153799534|gb|ABS50518.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Picea abies]
          Length = 717

 Score = 1014 bits (2622), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/560 (85%), Positives = 524/560 (93%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKRSESEYDCFG GHSSTSISAGLGMAVGRDLKGR N+V++VIGDGA
Sbjct: 158 MPTLRQTNGLSGFTKRSESEYDCFGAGHSSTSISAGLGMAVGRDLKGRNNHVISVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EAMNNAGYLDS+MIVILNDNKQVSLPTA LDGP+PPVGALSSALS+LQS++PL
Sbjct: 218 MTAGQAFEAMNNAGYLDSNMIVILNDNKQVSLPTANLDGPMPPVGALSSALSKLQSSKPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+G PMHELAAKVDEYARGMISGS STLFEELGLYYIGPVDGHN+DDL
Sbjct: 278 RELREVAKGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL++VK T TTGPVLIHVVTEKGRGYPYA +AADKYHGVAKFDPATGKQFK  A TQ+
Sbjct: 338 LTILQDVKATHTTGPVLIHVVTEKGRGYPYAXRAADKYHGVAKFDPATGKQFKGKAPTQT 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI+EA++D  VVAIHAAMGGGTGLN+F +RFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTAYFAEALISEADIDNXVVAIHAAMGGGTGLNMFSKRFPSRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQV+HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT++
Sbjct: 458 ACEGLKPFCAIYSSFLQRAYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYL 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFR+PRGNG+G  LPPGNKG+PLEVGKG
Sbjct: 518 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRFPRGNGVGARLPPGNKGVPLEVGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYGT VQ+CLAASALLE  GL LTVADARFCKPLD  LIRSLA+ HEV
Sbjct: 578 RILLEGDRVALLGYGTVVQNCLAASALLEEQGLSLTVADARFCKPLDRDLIRSLAREHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEG+IGGFGSHV  FLA DG LDG +KWRP+VLPD YI+HG+P DQ+ +AGLT SH
Sbjct: 638 IITVEEGTIGGFGSHVAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPNDQMVEAGLTASH 697

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+V NILG+TREAL++MS
Sbjct: 698 IAASVLNILGRTREALQVMS 717


>gi|168007322|ref|XP_001756357.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
           patens]
 gi|162692396|gb|EDQ78753.1| 1-deoxyxylulose 5-phosphate synthase [Physcomitrella patens subsp.
           patens]
          Length = 729

 Score = 1009 bits (2609), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/560 (85%), Positives = 518/560 (92%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQTDGLSGF KR+ESEYD FG GHSSTSISAGLGMAVGRDLKG+KNNV+AVIGDGA
Sbjct: 170 MHTLRQTDGLSGFVKRAESEYDAFGAGHSSTSISAGLGMAVGRDLKGKKNNVIAVIGDGA 229

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD +MIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQS+RPL
Sbjct: 230 MTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPL 289

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+GGP H LA+KVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 290 RELREVAKGVTKQLGGPAHVLASKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDL 349

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL EVKNT TTGPVLIH+VTEKGRGYPYAE+AADKYHGV KFDPATGKQ K  A TQ+
Sbjct: 350 VTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPATGKQNKVKAPTQA 409

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKDVV IHAAMGGGTG+N+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 410 YTTYFAEALIAEAEVDKDVVGIHAAMGGGTGMNIFAKRFPERCFDVGIAEQHAVTFAAGL 469

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC+IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 470 ACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 529

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAELFHMVATAAAIDDRPSCFRYPRGNGIGV+LP  NKGIP+EVG+G
Sbjct: 530 ACLPNMVVMAPADEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPAKNKGIPIEVGRG 589

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG  VALLGYGT VQ+CLAA  LL   G+  TVADARFCKPLD  LIR LAK+H+V
Sbjct: 590 RILLEGTEVALLGYGTMVQNCLAAHVLLADLGVSATVADARFCKPLDRDLIRQLAKNHQV 649

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQF+A DGLLDG +KWRPLVLPDRYI+HG+P DQ A+AGLT  H
Sbjct: 650 LITVEEGSIGGFGSHVVQFMALDGLLDGKLKWRPLVLPDRYIEHGAPKDQYAEAGLTAGH 709

Query: 541 IAATVFNILGQTREALEIMS 560
           IAAT  N+LG+TREAL++M+
Sbjct: 710 IAATALNVLGKTREALQVMT 729


>gi|46361691|gb|AAS89341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ginkgo biloba]
          Length = 717

 Score = 1003 bits (2592), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/562 (86%), Positives = 523/562 (93%), Gaps = 2/562 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKRSESEYD FG GHSSTSISAGLGMAVGRDLKGR N+V++VIGDGA
Sbjct: 156 MPTLRQTNGLSGFTKRSESEYDSFGAGHSSTSISAGLGMAVGRDLKGRNNHVISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS+MIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQS+RPL
Sbjct: 216 MTAGQAYEAMNNAGYLDSNMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSSRPL 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+GG MHELAAKVDEYARGMISGS STLFEE+GLYYIGPVDGHN+DDL
Sbjct: 276 RELREVAKGVTKQLGGSMHELAAKVDEYARGMISGSRSTLFEEMGLYYIGPVDGHNIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL EVK T TTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK  A+TQS
Sbjct: 336 VTILREVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAQTQS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDK++VAIHAAMGGGTGLN+FL+RFP+RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTTYFAEALIAEAEVDKNIVAIHAAMGGGTGLNMFLKRFPSRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAY--DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           ACEGLKPFCAIYSSF+QRAY       DVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT
Sbjct: 456 ACEGLKPFCAIYSSFLQRAYDQVVHDVDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVT 515

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           +++CLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV+LP GNKG+PLEVG
Sbjct: 516 YLSCLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVQLPIGNKGVPLEVG 575

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRIL EG+RVALLGYGT VQ+CLAA ALLE  GL LTVADARFCKPLD  LIRSLA+ H
Sbjct: 576 KGRILAEGDRVALLGYGTVVQNCLAAGALLEEQGLSLTVADARFCKPLDRDLIRSLAREH 635

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EVLITVEEGSIGGFGSHV QFL+ DGLLDG +KWRPLVLPDRYI+HG+P DQ+A AGLT 
Sbjct: 636 EVLITVEEGSIGGFGSHVSQFLSLDGLLDGKLKWRPLVLPDRYIEHGAPIDQMADAGLTA 695

Query: 539 SHIAATVFNILGQTREALEIMS 560
           SHIAA+V NILG+TR+A +IMS
Sbjct: 696 SHIAASVLNILGRTRDAPQIMS 717


>gi|183206797|gb|ACC54557.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 1 [Pinus
           densiflora]
          Length = 707

 Score =  992 bits (2565), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/560 (83%), Positives = 518/560 (92%), Gaps = 4/560 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKRSESEYDCFG GHSSTSISAGLGMA GRDLKG+ N+V++VIGDGA
Sbjct: 152 MPTLRQTNGLSGFTKRSESEYDCFGAGHSSTSISAGLGMAAGRDLKGKNNHVISVIGDGA 211

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EAMNNA YLDS+MIVILNDNKQVSLPTA LDGPIPPVGALS    +LQS++PL
Sbjct: 212 MTAGQAFEAMNNARYLDSNMIVILNDNKQVSLPTANLDGPIPPVGALS----KLQSSKPL 267

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+G PMHELAAKVDEYARGMISGS STLFEELGLYYIGPVDGHN+DDL
Sbjct: 268 RELREVAKGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDL 327

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL +VK T TTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK  A TQ+
Sbjct: 328 LTILRDVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAPTQT 387

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALI+EAE DK++VA+HAAMGGGTGLN+F +RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 388 YTTYFAEALISEAEADKNIVAVHAAMGGGTGLNMFSKRFPTRCFDVGIAEQHAVTFAAGL 447

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQV+HDVDLQ LPVRFAMDRAGLVGADGPTHCG+FDVT++
Sbjct: 448 ACEGLKPFCAIYSSFLQRAYDQVIHDVDLQNLPVRFAMDRAGLVGADGPTHCGAFDVTYL 507

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS+EAELFHMVATAAAIDDRPSCF +PRGNG+G +LPPGNKG+PLE+GKG
Sbjct: 508 ACLPNMVVMAPSNEAELFHMVATAAAIDDRPSCFGFPRGNGVGAQLPPGNKGVPLEIGKG 567

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYGT VQ+CLAASALLE   L +TVADARFCKPLD  L+RSLA+ HEV
Sbjct: 568 RILVEGDRVALLGYGTVVQNCLAASALLEEQDLSVTVADARFCKPLDRDLVRSLAREHEV 627

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+IGGFGSHV  FLA DG LDG +KWRP+VLPD YI+HG+P+DQ+ +AGLT SH
Sbjct: 628 LITVEEGTIGGFGSHVAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPSDQMIEAGLTASH 687

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+V N+LG+TREAL++MS
Sbjct: 688 IAASVLNMLGRTREALQVMS 707


>gi|168002605|ref|XP_001754004.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694980|gb|EDQ81326.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 725

 Score =  992 bits (2564), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/560 (84%), Positives = 511/560 (91%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGLSGF KR+ESEYD FG GHSSTSISAGLGMAVGRDLKG+KNNV++VIGDGA
Sbjct: 166 MQTLRQTDGLSGFVKRAESEYDPFGAGHSSTSISAGLGMAVGRDLKGKKNNVISVIGDGA 225

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD +MIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQS+RPL
Sbjct: 226 MTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPL 285

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ GG  H LA+KVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 286 RELREVAKGVTKQFGGSAHILASKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNLDDL 345

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL EVKNT TTGPVLIH+VTEKGRGYPYAE+AADKYHGV KFDPATGKQ K    TQ+
Sbjct: 346 VTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPATGKQKKVKTATQA 405

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE+DK ++ IHAAMGGGTG+N+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 406 YTTYFAEALIAEAELDKSIIGIHAAMGGGTGMNMFAKRFPERCFDVGIAEQHAVTFAAGL 465

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC+IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 466 ACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 525

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAELF+MVATA  I+DRPSCFRYPRGNGIGVELP  NKG P+EVGKG
Sbjct: 526 ACLPNMVVMAPSDEAELFNMVATAVTIEDRPSCFRYPRGNGIGVELPANNKGAPIEVGKG 585

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG +VALLGYGT VQ+CLAA +LL   G+  TVAD RFCKPLD  LIR LAK+H+V
Sbjct: 586 RILLEGTQVALLGYGTMVQNCLAAHSLLAKLGISATVADGRFCKPLDRDLIRQLAKNHQV 645

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG ++WRPLVLPDRYI+HGSP DQ A+AGLT  H
Sbjct: 646 LITVEEGSIGGFGSHVAQFMALDGLLDGKLQWRPLVLPDRYIEHGSPKDQYAEAGLTAGH 705

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATV N+LG+TREALE+MS
Sbjct: 706 IAATVLNVLGKTREALELMS 725


>gi|374498909|gb|AEZ53173.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rosa rugosa]
          Length = 523

 Score =  986 bits (2548), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/523 (91%), Positives = 506/523 (96%)

Query: 39  MAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD 98
           MAVGRDLKG+ N+VVAVIGDGAMTAGQAYEAMNNAGYLDSDMI+ILNDNKQVSLPTA LD
Sbjct: 1   MAVGRDLKGKNNHVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIIILNDNKQVSLPTANLD 60

Query: 99  GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGS 158
           GPIPPVGALSSALS+LQSNRPLRELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGS
Sbjct: 61  GPIPPVGALSSALSKLQSNRPLRELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGS 120

Query: 159 TLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKY 218
           TLFEELGLYYIGPVDGHNVDDL+AIL+EVK T+TTGPVLIH++TEKGRGYPYAEKAADKY
Sbjct: 121 TLFEELGLYYIGPVDGHNVDDLIAILQEVKTTQTTGPVLIHLITEKGRGYPYAEKAADKY 180

Query: 219 HGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRR 278
           HGVAKFDPATGKQFK++A TQSYTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLFLRR
Sbjct: 181 HGVAKFDPATGKQFKANASTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRR 240

Query: 279 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAM 338
           FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAM
Sbjct: 241 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAM 300

Query: 339 DRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 398
           DRAGLVGADGPTHCG+FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR
Sbjct: 301 DRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 360

Query: 399 GNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVA 458
           GNG+GVELP GNKG PLEVGKGRILIEGERVALLGYG+AVQ+CLAA+ L+E  GLRLTVA
Sbjct: 361 GNGVGVELPTGNKGTPLEVGKGRILIEGERVALLGYGSAVQTCLAAATLVEPLGLRLTVA 420

Query: 459 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLP 518
           DARFCKPLDHAL+R LAKSHE LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRPLVLP
Sbjct: 421 DARFCKPLDHALVRKLAKSHEFLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPLVLP 480

Query: 519 DRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMSF 561
           DRYIDHG+PADQLA AGLTP H+AATVFNILGQTREALE+MSF
Sbjct: 481 DRYIDHGAPADQLADAGLTPCHLAATVFNILGQTREALEVMSF 523


>gi|374639399|gb|AEZ55688.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
           miltiorrhiza]
          Length = 703

 Score =  985 bits (2546), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/561 (85%), Positives = 518/561 (92%), Gaps = 11/561 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGLSGFTKRSES+YDCFG GHSST+ISAGLGMAVGRDLKGRKN+VVAVIGDGA
Sbjct: 149 MPTLRQTDGLSGFTKRSESDYDCFGAGHSSTTISAGLGMAVGRDLKGRKNHVVAVIGDGA 208

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALS ALSRLQSNRPL
Sbjct: 209 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSRALSRLQSNRPL 268

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           REL E +KG      G MHELAAK   + RG++SGSGSTLFEELGLYYIGPVDGHN+ DL
Sbjct: 269 RELGEASKG------GSMHELAAK---HGRGLMSGSGSTLFEELGLYYIGPVDGHNIHDL 319

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
             IL  VKNTK TGPVLIHVVTEKG+GYPYAE+AADKYHGV+KFDPATGKQFK++ARTQS
Sbjct: 320 TTILARVKNTKITGPVLIHVVTEKGKGYPYAERAADKYHGVSKFDPATGKQFKANARTQS 379

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTT FA ALIAEAE D+DVVAIHAAMGGGTGL+LF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 380 YTTCFARALIAEAEADEDVVAIHAAMGGGTGLDLFNHRFPTRCFDVGIAEQHAVTFAAGL 439

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV+FM
Sbjct: 440 ACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVSFM 499

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMV+TAAAIDDRP CFRYPRG+G+GVELPPGNKG+PLEVG+G
Sbjct: 500 ACLPNMVVMAPSDEAELCHMVSTAAAIDDRPCCFRYPRGDGVGVELPPGNKGVPLEVGRG 559

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYG AVQSCLAA+ALLE +GLRLTVADARFCKPLD AL+R+LA++H+ 
Sbjct: 560 RILVEGERVALLGYGAAVQSCLAAAALLEPHGLRLTVADARFCKPLDRALVRNLARTHDA 619

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGSHV  FLA DGLLDG +KWRPLVLPDRY+DHG+PADQL Q GLTPS 
Sbjct: 620 LITVEEGSVGGFGSHVAHFLALDGLLDGNLKWRPLVLPDRYVDHGAPADQLTQVGLTPSC 679

Query: 541 IAATVFNILG--QTREALEIM 559
           IAAT+FNILG  ++REALEI+
Sbjct: 680 IAATIFNILGSWKSREALEII 700


>gi|215478268|gb|ACJ67021.1| 1-deoxy-D-xylulose 5-phosphate synthase type I [Pinus taeda]
          Length = 707

 Score =  982 bits (2539), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/560 (82%), Positives = 514/560 (91%), Gaps = 4/560 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT G++GF +R ESE+D FG GHSSTSISA +GMAVGRDL G+ N+V+ VIGDGA
Sbjct: 152 MSTLRQTSGIAGFPRRVESEHDAFGAGHSSTSISAAVGMAVGRDLLGKHNHVIGVIGDGA 211

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS+MIVILNDNKQVSLPTA LDGPIPPVGALS    +LQS++PL
Sbjct: 212 MTAGQAYEAMNNAGFLDSNMIVILNDNKQVSLPTANLDGPIPPVGALS----KLQSSKPL 267

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+G PMHELAAKVDEYARGMISGS STLFEELGLYYIGPVDGHN+DDL
Sbjct: 268 RELREVAKGVTKQLGAPMHELAAKVDEYARGMISGSRSTLFEELGLYYIGPVDGHNIDDL 327

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL EVK T TTGPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQFK  A TQ+
Sbjct: 328 LTILREVKATHTTGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQFKGKAPTQT 387

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALI+EAE DK++VAIHAAMGGGTGLN+F +RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 388 YTTYFAEALISEAEADKNIVAIHAAMGGGTGLNMFSKRFPTRCFDVGIAEQHAVTFAAGL 447

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQV+HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT++
Sbjct: 448 ACEGLKPFCAIYSSFLQRAYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYL 507

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS+E ELFHMVATAAAIDDRPSCFR+PRGNG+G +LPPGNKG+PLE+GKG
Sbjct: 508 ACLPNMVVMAPSNETELFHMVATAAAIDDRPSCFRFPRGNGVGAQLPPGNKGVPLEIGKG 567

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG+RVALLGYGT VQ+CLAASALLE   L +TVADARFCKPLD  LIRSLA+ HEV
Sbjct: 568 RILVEGDRVALLGYGTVVQNCLAASALLEEQDLSVTVADARFCKPLDRDLIRSLAREHEV 627

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+IGGFGSHV  FLA DG LDG +KWRP+VLPD YI+HG+P+DQ+ +AGLT SH
Sbjct: 628 LITVEEGTIGGFGSHVAHFLALDGFLDGKLKWRPMVLPDHYIEHGAPSDQMIEAGLTASH 687

Query: 541 IAATVFNILGQTREALEIMS 560
           IAA+V N+LG+TREAL++MS
Sbjct: 688 IAASVLNVLGRTREALQVMS 707


>gi|168038235|ref|XP_001771607.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677163|gb|EDQ63637.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 679

 Score =  980 bits (2533), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/562 (84%), Positives = 514/562 (91%), Gaps = 2/562 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQTDGLSGF KR+ESEYD FG GHSSTSISAGLGMAVGRDLKG+KNNV+AVIGDGA
Sbjct: 118 MHTLRQTDGLSGFVKRAESEYDAFGAGHSSTSISAGLGMAVGRDLKGKKNNVIAVIGDGA 177

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD +MIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQS+RPL
Sbjct: 178 MTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSRPL 237

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+GGP H LA+KVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 238 RELREVAKGVTKQLGGPAHVLASKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNMDDL 297

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL EVKNT TTGPVLIH+VTEKGRGYPYAE+AADKYHGV KFDPATGKQ K  A TQ+
Sbjct: 298 VTILREVKNTSTTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPATGKQNKVKAATQA 357

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAEVDKD++ IHAAMGGGTG+N+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 358 YTTYFAEALIAEAEVDKDIIGIHAAMGGGTGMNMFAKRFPERCFDVGIAEQHAVTFAAGL 417

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC+IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 418 ACEGLKPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 477

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAELFHMVATAA IDDRPSCFRYPRGNGIG +LP  NKGIP+E+GKG
Sbjct: 478 ACLPNMVVMAPADEAELFHMVATAAQIDDRPSCFRYPRGNGIGAQLPENNKGIPVEIGKG 537

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG  VALLGYGT VQ+CLAA ALL   G+  TVADARFCKPLD  LIR LAK+H+V
Sbjct: 538 RILLEGTEVALLGYGTMVQNCLAARALLADLGVAATVADARFCKPLDRDLIRQLAKNHQV 597

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVK--WRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +ITVEEGSIGGFGSHV QF+A DGLLDG +K    PLVLPDRYI+HG+P DQ A+AGLT 
Sbjct: 598 IITVEEGSIGGFGSHVAQFMALDGLLDGKLKASLLPLVLPDRYIEHGAPKDQYAEAGLTA 657

Query: 539 SHIAATVFNILGQTREALEIMS 560
            HIAAT  N+LG+TREAL++M+
Sbjct: 658 GHIAATALNVLGKTREALQVMT 679


>gi|302815172|ref|XP_002989268.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
 gi|300143011|gb|EFJ09706.1| hypothetical protein SELMODRAFT_427859 [Selaginella moellendorffii]
          Length = 728

 Score =  979 bits (2532), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/560 (82%), Positives = 511/560 (91%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQTDG+ GFTKRSESEYD FG GHSST+ISAGLGMAV RDL+G+KNNV+AVIGDGA
Sbjct: 168 MHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGLGMAVARDLQGKKNNVIAVIGDGA 227

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD+++IVILNDNKQVSLPTATLDGP PPVGALSSALSRLQS++ L
Sbjct: 228 MTAGQAYEAMNNAGYLDTNLIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSKKL 287

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG MH+LAAKVDEYARGMISG+G+T FEELGLYYIGPVDGH +DDL
Sbjct: 288 RELREVAKGVTKQIGGHMHQLAAKVDEYARGMISGTGATFFEELGLYYIGPVDGHRIDDL 347

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+EVK  +T GPVLIHVVTEKGRGYPYAE+AADKYHGV KFDPATGKQ K    T++
Sbjct: 348 IAILKEVKAAETIGPVLIHVVTEKGRGYPYAERAADKYHGVVKFDPATGKQQKGKPATKA 407

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAE+L+AEA+ D+ +VAIHAAMGGGTGLN+F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 408 YTTYFAESLVAEAQKDESIVAIHAAMGGGTGLNIFQKQFPERCFDVGIAEQHAVTFAAGL 467

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 468 ASEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 527

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HM+ATAAAIDDRPSCFRYPRGNGIG  LP GNKG P+E+GKG
Sbjct: 528 ACLPNMVVMAPADEAELMHMIATAAAIDDRPSCFRYPRGNGIGALLPAGNKGTPVEIGKG 587

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVALLGYGT VQ+CL A  LL+ +GL +TVADARFCKPLD  L+R LAK HEV
Sbjct: 588 RILVEGSRVALLGYGTMVQNCLGARNLLQEHGLSVTVADARFCKPLDQQLVRQLAKEHEV 647

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVV FLA DGLLDG +KWRP+VLPDRYIDHGSP DQ+A+AGLT SH
Sbjct: 648 LITVEEGSIGGFGSHVVHFLALDGLLDGKLKWRPIVLPDRYIDHGSPQDQMAEAGLTSSH 707

Query: 541 IAATVFNILGQTREALEIMS 560
           IAAT  ++LG+TREAL + S
Sbjct: 708 IAATALSMLGKTREALHLKS 727


>gi|168015770|ref|XP_001760423.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688437|gb|EDQ74814.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 736

 Score =  979 bits (2530), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/561 (82%), Positives = 508/561 (90%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT G+SGF KR+ESEYD FG GHSSTSISAGLGMAVGRDLKGR NNV+AVIGDGA
Sbjct: 172 MRTLRQTAGISGFVKRAESEYDPFGAGHSSTSISAGLGMAVGRDLKGRTNNVIAVIGDGA 231

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD +MIVILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPL
Sbjct: 232 MTAGQAYEAMNNAGYLDCNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPL 291

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+GG  H LAAKVDEYARGMISGSGSTLFEELGLYYIGPV+GHN++DL
Sbjct: 292 RELREVAKGVTKQLGGSAHVLAAKVDEYARGMISGSGSTLFEELGLYYIGPVNGHNLEDL 351

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL EVKNT TTGPVLIH+VTEKGRGYPYAE+AADKYHGV KFDPATGKQ K    TQ+
Sbjct: 352 VTILREVKNTATTGPVLIHLVTEKGRGYPYAERAADKYHGVVKFDPATGKQHKVKTATQA 411

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE+DK +V IHAAMGGGTG+N+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 412 YTTYFAEALIAEAELDKSIVGIHAAMGGGTGMNMFAKRFPERCFDVGIAEQHAVTFAAGL 471

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL+PFC+IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 472 ACEGLRPFCSIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 531

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAELF+MVATAA IDD PSCFRYPRGNGIGV+LP  NKG P+EVGKG
Sbjct: 532 ACLPNMVVMAPADEAELFNMVATAAVIDDSPSCFRYPRGNGIGVQLPANNKGTPIEVGKG 591

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG  VALLGYGT VQ+CLAA +LL   G+  TVAD RFCKPLD  LIR LA++H+V
Sbjct: 592 RILLEGTDVALLGYGTMVQNCLAAHSLLADVGISATVADGRFCKPLDRGLIRQLAENHQV 651

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFGSHV QF+A DGLLDG +KWRPLVLPDRYI+HG+P DQ A+AGLT  H
Sbjct: 652 LITVEEGAVGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIEHGAPNDQFAEAGLTAGH 711

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAAT  N+LG+TR+AL+IMS 
Sbjct: 712 IAATALNVLGKTRQALQIMSL 732


>gi|357447515|ref|XP_003594033.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355483081|gb|AES64284.1| 1-deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 718

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/561 (83%), Positives = 514/561 (91%), Gaps = 4/561 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGLSGFTKRSESE+D FGTGHSST+ISAGLGMAVGRDLKG K+NVV +IGDGA
Sbjct: 160 MHTLRQKDGLSGFTKRSESEFDIFGTGHSSTTISAGLGMAVGRDLKGEKHNVVTIIGDGA 219

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EAMNNAGYL+S+MIVILNDNKQVSLPTA LDGPIPPVGALS  LSRLQSN PL
Sbjct: 220 MTAGQAFEAMNNAGYLNSNMIVILNDNKQVSLPTADLDGPIPPVGALSRTLSRLQSNIPL 279

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ G P+    AKV+EYA GMISGSGSTLFEELGL YIGPVDGH++DDL
Sbjct: 280 RELREVAKGVTKQNGRPI----AKVEEYALGMISGSGSTLFEELGLDYIGPVDGHSIDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL++VK+ K TGPVLIHVVTEKG GY YAEKAADKYHGVAKFDPATGKQFK+ A T  
Sbjct: 336 VAILKQVKSPKKTGPVLIHVVTEKGLGYSYAEKAADKYHGVAKFDPATGKQFKTKAPTPV 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
            T+ F +ALIAEAE DK +V IHAAMGGGTG+N FLRRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 396 LTSCFVDALIAEAEADKGIVGIHAAMGGGTGMNHFLRRFPTRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRF +D+AG VG DGPTHCGSFDVT+M
Sbjct: 456 ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFVIDKAGFVGEDGPTHCGSFDVTYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAE+ HMVATA AI+DRPSCFR+PR NG GVELPPGN+GIP+E+GKG
Sbjct: 516 ACLPNMVVMAPSDEAEIIHMVATAVAINDRPSCFRFPRANGTGVELPPGNRGIPMEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLG+GTAVQ+C+AA+++LE +GLR+TVADARFCKPLDH+LIRSLAKSHEV
Sbjct: 576 RILIEGERVALLGFGTAVQNCVAAASMLEDHGLRVTVADARFCKPLDHSLIRSLAKSHEV 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWRP+V PD YIDHGSPA+QLA AGLT SH
Sbjct: 636 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPMVFPDIYIDHGSPAEQLAVAGLTSSH 695

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATVFNILGQTREALE+M+ 
Sbjct: 696 IAATVFNILGQTREALEVMTL 716


>gi|302764446|ref|XP_002965644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
           moellendorffii]
 gi|300166458|gb|EFJ33064.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selaginella
           moellendorffii]
          Length = 636

 Score =  974 bits (2517), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/560 (81%), Positives = 509/560 (90%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQTDG+ GFTKRSESEYD FG GHSST+ISAGLGMAV RDL+G+KNNV+AVIGDGA
Sbjct: 76  MHTLRQTDGICGFTKRSESEYDPFGAGHSSTTISAGLGMAVARDLQGKKNNVIAVIGDGA 135

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD++MIVILNDNKQVSLPTATLDGP PPVGALSSALSRLQS++ L
Sbjct: 136 MTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPAPPVGALSSALSRLQSSKKL 195

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG MH+LAAKVDEYARGMISG+G+T FEELGLYYIGPVDGH +DDL
Sbjct: 196 RELREVAKGVTKQIGGHMHQLAAKVDEYARGMISGTGATFFEELGLYYIGPVDGHRIDDL 255

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+EVK  +T GPVLIHVVTEKG GYPYAE+AADKYHGV KFDPATGKQ K    T++
Sbjct: 256 ITILKEVKAAETIGPVLIHVVTEKGHGYPYAERAADKYHGVVKFDPATGKQQKGKPATKA 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAE+L+AEA+ D+ +VAIHAAMGGGTGLN+F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 316 YTTYFAESLVAEAQKDESIVAIHAAMGGGTGLNIFQKQFPERCFDVGIAEQHAVTFAAGL 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 376 ASEGIKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HM+ATAAAIDDRPSCFRYPRGNGIG  LP GNKG P+E+GKG
Sbjct: 436 ACLPNMVVMAPADEAELMHMIATAAAIDDRPSCFRYPRGNGIGALLPAGNKGTPVEIGKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVALLGYGT VQ+CL A  LL+ +GL +TVADARFCKPLD  L+R LAK HEV
Sbjct: 496 RILVEGSRVALLGYGTMVQNCLGARNLLQEHGLSVTVADARFCKPLDQQLVRQLAKEHEV 555

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVV FLA DGLLDG +KWRP+VLPDRYIDHGSP DQ+A+AGLT SH
Sbjct: 556 LITVEEGSIGGFGSHVVHFLALDGLLDGKLKWRPIVLPDRYIDHGSPQDQMAEAGLTSSH 615

Query: 541 IAATVFNILGQTREALEIMS 560
           IAAT  ++LG+TREAL + S
Sbjct: 616 IAATALSMLGKTREALHLKS 635


>gi|374669414|gb|AEZ55865.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 1 [Mitragyna
           speciosa]
          Length = 669

 Score =  969 bits (2504), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/510 (93%), Positives = 496/510 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGLSGFTKRSESEYDCFG GHSSTSISAGLGMAVGRDLKGRKN+VVAVIGDGA
Sbjct: 158 MPTLRQTDGLSGFTKRSESEYDCFGAGHSSTSISAGLGMAVGRDLKGRKNHVVAVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQSNRPL
Sbjct: 218 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPL 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARG+ISGSGSTLFEELG YYIGPVDGH++DDL
Sbjct: 278 RELREVAKGVTKQIGGSVHELAAKVDEYARGLISGSGSTLFEELGFYYIGPVDGHSIDDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSS +TQS
Sbjct: 338 VAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPATGKQFKSSGKTQS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEAL+AEAE DKDVVAIHAAMGGGTGLNLFL RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTTYFAEALVAEAEADKDVVAIHAAMGGGTGLNLFLHRFPTRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV FM
Sbjct: 458 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAFM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAE+FHMVATAAAIDDRPSC RYPRGNGIGVELPPGNKGIPLEVGKG
Sbjct: 518 ACLPNMVVMAPSDEAEVFHMVATAAAIDDRPSCLRYPRGNGIGVELPPGNKGIPLEVGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEGERVALLGYGTAVQSCLAA+AL+E +GLRLTVADARFCKPLDH+LIRSLAKSHEV
Sbjct: 578 RILIEGERVALLGYGTAVQSCLAAAALVEPHGLRLTVADARFCKPLDHSLIRSLAKSHEV 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTV 510
           LITVEEGSIGGFGSHV QF+A +GLLDG +
Sbjct: 638 LITVEEGSIGGFGSHVAQFMALNGLLDGNL 667


>gi|2612941|gb|AAB88295.1| CLA1 transketolase-like protein [Oryza sativa]
          Length = 594

 Score =  952 bits (2460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/514 (89%), Positives = 484/514 (94%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLSGFTKRSESEYD FGTGHSST+ISA LGMAVGRDLKG KNNVVAVIGDGA
Sbjct: 81  MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGA 140

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALS+LQS+RPL
Sbjct: 141 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPL 200

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 201 RELREVAKGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 261 ITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  VVAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 321 YTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 381 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP  KG+PLEVGKG
Sbjct: 441 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+EGERVALLGYG+AVQ CLAA++L+E +GL++TVADARFCKPLD  LIR LA SHEV
Sbjct: 501 RVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 514
           L+TVEEGSIGGFGSHV QF+A DGLLDG +KWRP
Sbjct: 561 LLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRP 594


>gi|7446974|pir||D71420 hypothetical protein - Arabidopsis thaliana
          Length = 703

 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/585 (79%), Positives = 501/585 (85%), Gaps = 58/585 (9%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLG--------MAVGRDLKGRKNNV 52
           M TMRQT+GLSGFTKR ESE+DCFGTGHSST+ISAGLG        MAVGRDLKG+ NNV
Sbjct: 147 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGNTINHSFGMAVGRDLKGKNNNV 206

Query: 53  VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALS 112
           VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP PPVGALSSALS
Sbjct: 207 VAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALS 266

Query: 113 RLQSNRPLRELREVAK----------GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFE 162
           RLQSN  LRELREVAK          G+TKQIGGPMH+LAAKVDEYARGMISG+GS+LFE
Sbjct: 267 RLQSNPALRELREVAKASLLHFFSRMGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLFE 326

Query: 163 ELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHG-- 220
           ELGLYYIGPVDGHN+DDLVAIL+EVK+T+TTGPVLIHVVTEKGRGYPYAE+A DKYHG  
Sbjct: 327 ELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGKT 386

Query: 221 -VAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRF 279
            V KFDPATG+QFK++ +TQSYTTYFAEAL+AEAEVDKDVVAIHAAMGGGTGLNLF RRF
Sbjct: 387 SVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRF 446

Query: 280 PTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMD 339
           PTRCFDVGIAEQHA                             VVHDVDLQKLPVRFAMD
Sbjct: 447 PTRCFDVGIAEQHA-----------------------------VVHDVDLQKLPVRFAMD 477

Query: 340 RAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRG 399
           RAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEA+LF+MVATA AIDDRPSCFRYPRG
Sbjct: 478 RAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRG 537

Query: 400 NGIGVELPPGNKGIPLE--------VGKGRILIEGERVALLGYGTAVQSCLAASALLESN 451
           NGIGV LPPGNKG+P+E        +GKGRIL EGERVALLGYG+AVQSCL A+ +LE  
Sbjct: 538 NGIGVALPPGNKGVPIEKISLGVFQIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEER 597

Query: 452 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 598 GLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 657

Query: 512 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 556
           WRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++G  REAL
Sbjct: 658 WRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 702


>gi|215478266|gb|ACJ67020.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Pinus taeda]
          Length = 740

 Score =  919 bits (2374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/558 (77%), Positives = 495/558 (88%), Gaps = 2/558 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT G++GF +R ESE+D FG GHSSTSISA +GMAVGRDL G+ N+V+ VIGDGA
Sbjct: 179 MSTLRQTSGIAGFPRRVESEHDAFGAGHSSTSISAAVGMAVGRDLLGKHNHVIGVIGDGA 238

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS+MI+ILNDNKQVSLPTA LDGPIPPVGALSSALS+LQS++PL
Sbjct: 239 MTAGQAYEAMNNAGFLDSNMIIILNDNKQVSLPTANLDGPIPPVGALSSALSKLQSSKPL 298

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQ+G PMHELAAKVDEYARGMISGS S+LF+ELGLYYIGPVDGHN++D+
Sbjct: 299 RELREVAKGVTKQLGAPMHELAAKVDEYARGMISGSRSSLFDELGLYYIGPVDGHNIEDM 358

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE++K+   TGPVLIH+VTEKG+GYP AE+AADK HGV KFDP TGKQFKS +   S
Sbjct: 359 VTILEKIKSMPATGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPVTGKQFKSKSSVLS 418

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAEVD  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 419 YTQYFAEALIAEAEVDSKIVAIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGL 478

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +M
Sbjct: 479 ATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYM 538

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGK 419
           ACLPNM+VMAPSDE EL H+VATAAAIDDRPSCFR+PRGNG+G+  LP  NKG+PLE+GK
Sbjct: 539 ACLPNMIVMAPSDEVELMHIVATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGVPLEIGK 598

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           GRIL+EG RVA+LG+GT +Q+CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK H
Sbjct: 599 GRILVEGTRVAILGFGTIIQNCLAAGKILNEQAGISVTIADARFCKPLDGDLIKRLAKEH 658

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           E+L+TVEEGSIGGFGSHV  FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGLTP
Sbjct: 659 EILLTVEEGSIGGFGSHVSHFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLTP 718

Query: 539 SHIAATVFNILGQTREAL 556
            HIAAT+ ++LG+  +AL
Sbjct: 719 EHIAATIMSLLGKPHDAL 736


>gi|153799538|gb|ABS50520.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
          Length = 746

 Score =  907 bits (2345), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/557 (76%), Positives = 484/557 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT GL+GF +R ESE+D FG GHSSTSISA +GMAVGRDL G+ N+V+AVIGDGA
Sbjct: 180 MGTMRQTSGLAGFPRRVESEHDAFGVGHSSTSISAAIGMAVGRDLLGKHNHVIAVIGDGA 239

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEA+NNAG+LDS+MI+ILNDNKQVSLPTAT+DGP PPVGALSSAL RLQ+++  
Sbjct: 240 MTAGQAYEALNNAGFLDSNMIIILNDNKQVSLPTATIDGPAPPVGALSSALCRLQASKKF 299

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LREVAK +T QIGG  H+LAAKVD+YARGM S  GS LFEELGLYYIGPVDGHN+ DL
Sbjct: 300 RQLREVAKDITHQIGGATHQLAAKVDDYARGMFSAPGSALFEELGLYYIGPVDGHNIQDL 359

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAILE VK+  T GPVLIHVVTEKG+GYP AEKAADK HGV KFDPATGKQFK  + T S
Sbjct: 360 VAILENVKSMPTPGPVLIHVVTEKGKGYPPAEKAADKLHGVVKFDPATGKQFKPKSSTLS 419

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE L+AEAE D+ +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 420 YTQYFAEGLMAEAERDEKIVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 479

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FDVT+M
Sbjct: 480 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDVTYM 539

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVAT+AAIDDRPSCFR+PRGNG+GV LPP NKG PL++GKG
Sbjct: 540 ACLPNMVVMAPSDEAELMHMVATSAAIDDRPSCFRFPRGNGVGVPLPPNNKGTPLKIGKG 599

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG R+A+LGYG+ VQ+CLAA  +L   G+ +TVADARFCKPLD  LIR L K HE+
Sbjct: 600 RILAEGTRIAILGYGSIVQNCLAAREMLAQQGISVTVADARFCKPLDGDLIRRLVKEHEI 659

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FLA  GL DG +KWRP+VLPDRYIDHGSP DQ+ +AGL+  H
Sbjct: 660 LVTVEEGSIGGFGSHVSHFLALHGLFDGKLKWRPMVLPDRYIDHGSPKDQIEEAGLSSRH 719

Query: 541 IAATVFNILGQTREALE 557
           IAATV +++G+ + AL+
Sbjct: 720 IAATVMSLIGKPQNALQ 736


>gi|113473649|gb|ABI35993.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Catharanthus roseus]
          Length = 740

 Score =  907 bits (2343), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/561 (75%), Positives = 485/561 (86%), Gaps = 1/561 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQT GL+GF KR ES +D FG GHSSTSISAGLGMA+GRDL G+KN+V+ VIGDGA
Sbjct: 181 MHTMRQTCGLAGFPKRDESAHDAFGVGHSSTSISAGLGMAIGRDLLGKKNHVITVIGDGA 240

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDNKQVSLPTAT+DGP PP GALS+AL+RLQS+R  
Sbjct: 241 MTAGQAYEAMNNAGYLDSNLIIILNDNKQVSLPTATIDGPAPPTGALSNALTRLQSSRKF 300

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AKGVTKQ+GG +HE+AAKVD Y RGM S   S LFE+LG+YYIGP+DGHN++DL
Sbjct: 301 RLLREAAKGVTKQLGGQVHEMAAKVDTYMRGMNSQRAS-LFEDLGMYYIGPLDGHNMEDL 359

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE+VK+   TGPVLIH++TEKG+GYP AE AADK HGV KF+P TGKQFKS ++T+S
Sbjct: 360 VDILEKVKSVPATGPVLIHIITEKGKGYPPAEAAADKMHGVVKFEPMTGKQFKSRSKTKS 419

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI+EA  D  ++AIHAAMGGGTGLNLF + FP RCFDVGIAEQHAVTFAAGL
Sbjct: 420 YTNYFAESLISEAREDDKIIAIHAAMGGGTGLNLFQKHFPERCFDVGIAEQHAVTFAAGL 479

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQK+PVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 480 ASEGLKPFCAIYSSFLQRGYDQVVHDVDLQKIPVRFAMDRAGLVGADGPTHCGTFDTTFM 539

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDE EL HMVATAAAIDDRPSCFRYPRGNGIG  LPP NKG PL++GKG
Sbjct: 540 ACLPNMVVMAPSDETELMHMVATAAAIDDRPSCFRYPRGNGIGAILPPNNKGAPLQIGKG 599

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG  VQ+CL A+ LLE NG+  TV DARFCKPLD  LIR LA+ HEV
Sbjct: 600 RILLEGTRVAILGYGAMVQNCLMAAQLLEINGISATVVDARFCKPLDGDLIRKLAQQHEV 659

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFLA +GLLDG +KWR ++LPDRYIDHG+  DQ+ +AGLTP H
Sbjct: 660 LITVEEGSIGGFGSHVAQFLALNGLLDGNLKWRAMMLPDRYIDHGAQNDQIEEAGLTPKH 719

Query: 541 IAATVFNILGQTREALEIMSF 561
           IA TVF++L + +  L+++ F
Sbjct: 720 IAGTVFSLLSKNKNTLQVLQF 740


>gi|255586041|ref|XP_002533688.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223526414|gb|EEF28696.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 728

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/561 (75%), Positives = 488/561 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQT GL+GF KR ESE+D FG GHSSTSISAGLGMAVGRDL G+ N+V+AVIGDGA
Sbjct: 168 MSSIRQTFGLAGFPKRDESEHDAFGAGHSSTSISAGLGMAVGRDLVGKNNHVIAVIGDGA 227

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDNKQVSLPTAT+DGP PPVGALS AL++LQS+R +
Sbjct: 228 MTAGQAYEAMNNAGYLDSNLIIILNDNKQVSLPTATVDGPAPPVGALSKALTKLQSSRKI 287

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG+TKQIGG  HE+AAKVD Y RGM +GSG++LFEELGLYYIGPVDGH+V+DL
Sbjct: 288 RQLREAAKGITKQIGGQTHEIAAKVDTYVRGMAAGSGASLFEELGLYYIGPVDGHSVEDL 347

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL++VK+    GPVLIHV+TEKG+GY  AE AADK HGV KFDP +GKQ KS + T+S
Sbjct: 348 VTILKKVKSLPAPGPVLIHVITEKGKGYSPAEVAADKMHGVVKFDPTSGKQLKSKSNTKS 407

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D  +VAIHAAMGGGTGLNLF ++FP +CFDVGIAEQHAVTFAAGL
Sbjct: 408 YTQYFAESLIAEAEQDDKIVAIHAAMGGGTGLNLFQKQFPEKCFDVGIAEQHAVTFAAGL 467

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FDVT+M
Sbjct: 468 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDVTYM 527

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDE EL HMVATAAAIDDRPSCFRYPRGNGIG  LPP NKG PLE+GKG
Sbjct: 528 ACLPNMVVMAPSDETELMHMVATAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPLEIGKG 587

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVALLGYGT VQSCLAA+ LL+   +  TVADARFCKPLD  L+R LA+ HE+
Sbjct: 588 RILREGSRVALLGYGTMVQSCLAAADLLKKFNITATVADARFCKPLDGQLVRQLAQEHEI 647

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL  +GLLDG +KWRP++LPDRYIDHGS  DQ+ +AGL+  H
Sbjct: 648 LITVEEGSIGGFGSHVANFLCLNGLLDGNLKWRPMMLPDRYIDHGSQTDQIEEAGLSSKH 707

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATV +++G  +++L +++ 
Sbjct: 708 IAATVVSLIGGQKDSLHLLNL 728


>gi|40849969|gb|AAR95699.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Ginkgo biloba]
          Length = 738

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/558 (76%), Positives = 492/558 (88%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ESE+D FG GHSSTSISAGLGMAVGRDL G++N+VVAVIGDGA
Sbjct: 179 MHTIRQTSGLAGFPKRDESEHDAFGAGHSSTSISAGLGMAVGRDLLGKRNHVVAVIGDGA 238

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYLDS+MI+ILNDNKQVSLPTATLDG  PPVGALSSAL++ QS++ L
Sbjct: 239 MTAGQAYEAMNNSGYLDSNMIIILNDNKQVSLPTATLDGAAPPVGALSSALTKPQSSKKL 298

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  HE+A+KVDEYARGMIS +GS+LFEELGLYYIGPVDGHN++D+
Sbjct: 299 RKLREAAKSLTKQIGGQTHEIASKVDEYARGMISPAGSSLFEELGLYYIGPVDGHNMEDM 358

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL++VK+    GPVLIH+VT+KG+GYP AEKAADK HGV  FDPATGKQFKS + T S
Sbjct: 359 VTILDKVKSMPAPGPVLIHLVTDKGKGYPPAEKAADKLHGVVNFDPATGKQFKSKSSTLS 418

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA+ALIAEAE D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAG+
Sbjct: 419 YTQYFADALIAEAEEDSKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGM 478

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 479 ATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 538

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HM+ATAAAIDDRPSCFR+PRGNG+GV LPPGN+GIPLE+GKG
Sbjct: 539 ACLPNMVVMAPSDEAELMHMIATAAAIDDRPSCFRFPRGNGVGVPLPPGNRGIPLEIGKG 598

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            IL EG RVA+LG G  VQ+C+AA  LL+ + + +T+ADARFCKPLD  LIR LAK HE+
Sbjct: 599 CILQEGSRVAILGCGAIVQNCVAARMLLKEHDISITIADARFCKPLDGDLIRQLAKEHEI 658

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG+IGGFGSHV  FLA +GLLDG +KWR +VLPDRYI+HGSP DQ+ +AGL+  H
Sbjct: 659 LVTVEEGAIGGFGSHVPHFLALNGLLDGNLKWRAMVLPDRYIEHGSPKDQIEEAGLSSRH 718

Query: 541 IAATVFNILGQTREALEI 558
           IA+TV + LG+  +AL++
Sbjct: 719 IASTVMSPLGRPHDALQL 736


>gi|183206723|gb|ACC54554.1| putative 1-D-deoxyxylulose 5-phosphate synthase type 2 [Pinus
           densiflora]
          Length = 740

 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/558 (75%), Positives = 491/558 (87%), Gaps = 2/558 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES+YD FG GHSSTSISAGLGMAVGRDL  +KN+VVAVIGDGA
Sbjct: 179 MHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLGMAVGRDLLKKKNHVVAVIGDGA 238

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYL+S++I+ILNDNKQVSLPTATLDG  PPVGAL+ AL++LQS++ L
Sbjct: 239 MTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAAPPVGALTRALTKLQSSKKL 298

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG+TKQIGGP HE+A+KVD+YARG+IS +GS+LF+ELGLYYIGPVDGHN++D+
Sbjct: 299 RKLREAAKGLTKQIGGPTHEVASKVDKYARGLISPAGSSLFDELGLYYIGPVDGHNIEDM 358

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE++K+   TGPVLIH+VTEKG+GYP AE+AADK HGV KFDP TGKQFKS +   S
Sbjct: 359 VTILEKIKSMPATGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPVTGKQFKSKSSVLS 418

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAEVD  +V IHAAMGGGTGLN F ++FP RC DVGIAEQHAVTFAAGL
Sbjct: 419 YTQYFAEALIAEAEVDSKIVGIHAAMGGGTGLNFFQKKFPERCLDVGIAEQHAVTFAAGL 478

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +M
Sbjct: 479 ATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYM 538

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGK 419
           ACLPNM+VMAPSDE EL H+VATAAAIDDRP CFR+PRGNG+G+  LP  NKG+PLE+GK
Sbjct: 539 ACLPNMIVMAPSDEVELMHIVATAAAIDDRPCCFRFPRGNGVGLSNLPLNNKGVPLEIGK 598

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           GRIL+EG RVA+LG+GT +Q+CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK H
Sbjct: 599 GRILVEGTRVAILGFGTIIQNCLAAGKILNEQAGISVTIADARFCKPLDGDLIKRLAKEH 658

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           E+L+TVEEGSIGGFGSHV  FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGLTP
Sbjct: 659 EILLTVEEGSIGGFGSHVSHFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLTP 718

Query: 539 SHIAATVFNILGQTREAL 556
            HIAAT+ ++LG+  +AL
Sbjct: 719 EHIAATIMSLLGKPHDAL 736


>gi|11994386|dbj|BAB02345.1| 1-deoxyxylulose-5-phosphate synthase; transketolase [Arabidopsis
           thaliana]
          Length = 604

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/556 (78%), Positives = 479/556 (86%), Gaps = 32/556 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGA
Sbjct: 78  MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 137

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN   
Sbjct: 138 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC-- 195

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                         GMI  + STLFEELG +Y+GPVDGHN+DDL
Sbjct: 196 ------------------------------GMIRETSSTLFEELGFHYVGPVDGHNIDDL 225

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQS
Sbjct: 226 VSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQS 285

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 286 YTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 345

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFM
Sbjct: 346 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFM 405

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+G
Sbjct: 406 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRG 465

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 466 RILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEV 525

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYI+HGSP DQLA+AGLT SH
Sbjct: 526 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIEHGSPMDQLAEAGLTASH 585

Query: 541 IAATVFNILGQTREAL 556
           IAAT  N++G  REAL
Sbjct: 586 IAATALNLMGTPREAL 601


>gi|218199226|gb|EEC81653.1| hypothetical protein OsI_25196 [Oryza sativa Indica Group]
          Length = 713

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/558 (76%), Positives = 479/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL G+KN+V++VIGDGA
Sbjct: 155 MHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGA 214

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYLDS+MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+  L
Sbjct: 215 MTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKL 274

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK VTKQIGG  HE+AAKVDEYARGM+S SGSTLFEELGLYYIGPVDGH+VDDL
Sbjct: 275 RRLREAAKTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDL 334

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAI  +VK+    GPVL+H+VTEKG+GYP AE AAD+ HGV KFDP TG+QFKS   T S
Sbjct: 335 VAIFNKVKSMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLS 394

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAE D  VV IHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 395 YTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGL 454

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 455 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYM 514

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP +KG PLEVGKG
Sbjct: 515 ACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKG 574

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+ G RVALLGYGT VQ+C+ A+  L+ +G+ +TVADARFCKPLD  LIR LA  HEV
Sbjct: 575 RVLVGGNRVALLGYGTMVQACMKAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEV 634

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  +L+  GLLDG +K R + LPDRYIDHG+P DQL +AGLTP H
Sbjct: 635 LVTVEEGSIGGFGSHVAHYLSLSGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRH 694

Query: 541 IAATVFNILGQTREALEI 558
           IAATV ++LG+  EAL++
Sbjct: 695 IAATVLSLLGRPMEALQL 712


>gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa Japonica Group]
 gi|75225072|sp|Q6YU51.1|DXS2_ORYSJ RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic; Short=1-deoxyxylulose-5-phosphate
           synthase; Short=DXP synthase; Short=DXPS; Flags:
           Precursor
 gi|34394179|dbj|BAC84616.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|50509413|dbj|BAD31023.1| putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
 gi|113610622|dbj|BAF21000.1| Os07g0190000 [Oryza sativa Japonica Group]
 gi|215704796|dbj|BAG94824.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222636586|gb|EEE66718.1| hypothetical protein OsJ_23394 [Oryza sativa Japonica Group]
          Length = 713

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/558 (76%), Positives = 479/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL G+KN+V++VIGDGA
Sbjct: 155 MHTIRQTSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGA 214

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYLDS+MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+  L
Sbjct: 215 MTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKL 274

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK VTKQIGG  HE+AAKVDEYARGM+S SGSTLFEELGLYYIGPVDGH+VDDL
Sbjct: 275 RRLREAAKTVTKQIGGQAHEVAAKVDEYARGMVSASGSTLFEELGLYYIGPVDGHSVDDL 334

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAI  +VK+    GPVL+H+VTEKG+GYP AE AAD+ HGV KFDP TG+QFKS   T S
Sbjct: 335 VAIFNKVKSMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPTTGRQFKSKCSTLS 394

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAE D  VV IHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 395 YTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGL 454

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 455 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVAYM 514

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP +KG PLEVGKG
Sbjct: 515 ACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGIGAVLPPNHKGTPLEVGKG 574

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+ G RVALLGYGT VQ+C+ A+  L+ +G+ +TVADARFCKPLD  LIR LA  HEV
Sbjct: 575 RVLVGGNRVALLGYGTMVQACMKAAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEV 634

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  +L+  GLLDG +K R + LPDRYIDHG+P DQL +AGLTP H
Sbjct: 635 LVTVEEGSIGGFGSHVAHYLSLSGLLDGPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRH 694

Query: 541 IAATVFNILGQTREALEI 558
           IAATV ++LG+  EAL++
Sbjct: 695 IAATVLSLLGRPLEALQL 712


>gi|224284202|gb|ACN39837.1| unknown [Picea sitchensis]
          Length = 740

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/558 (75%), Positives = 491/558 (87%), Gaps = 2/558 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES+YD FG GHSSTSISAGLGMAVGRDL  + N+VVAVIGDGA
Sbjct: 179 MHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLGMAVGRDLLRKSNHVVAVIGDGA 238

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYL+S++I+ILNDNKQVSLPTATLDG  PPVGAL+ AL++LQS++ L
Sbjct: 239 MTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAAPPVGALTRALTKLQSSKKL 298

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG+TKQIGG  HE+A+KVD+Y RG+I+ + S+LFEELGLYYIGPVDGHN++D+
Sbjct: 299 RKLREAAKGLTKQIGGQTHEMASKVDKYTRGIINPAASSLFEELGLYYIGPVDGHNIEDM 358

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE++K+   +GPVLIH+VTEKG+GYP AE+AADK HGV KFDPATGKQFKS +   S
Sbjct: 359 VTILEKIKSMPDSGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPATGKQFKSKSSVLS 418

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAEVD  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 419 YTQYFAESLIAEAEVDSKIVAIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGL 478

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +M
Sbjct: 479 ATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYM 538

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGK 419
           ACLPNMVVMAPSDE EL HMVATAAAIDDRPSCFR+PRGNG+G+  LP  NKG+PLE+G+
Sbjct: 539 ACLPNMVVMAPSDEVELMHMVATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGLPLEIGR 598

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           GRIL+EG RVA+LG+GT +Q+CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK H
Sbjct: 599 GRILVEGTRVAILGFGTIIQNCLAAGKMLNEQAGISVTIADARFCKPLDGDLIKRLAKEH 658

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           E+L+TVEEGSIGGFGSHV  FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGL+P
Sbjct: 659 EILLTVEEGSIGGFGSHVSHFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLSP 718

Query: 539 SHIAATVFNILGQTREAL 556
            HIAAT+ ++LG+  +AL
Sbjct: 719 KHIAATIMSLLGKPHDAL 736


>gi|255583239|ref|XP_002532384.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223527908|gb|EEF29996.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 714

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/558 (75%), Positives = 481/558 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMR+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N+V++VIGDGA
Sbjct: 156 MHTMRKTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGKNNHVISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++IVILNDNKQVSLPTATLDGP  PVGALSSAL+++Q++   
Sbjct: 216 MTAGQAYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALTKIQASTKF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGH+++DL
Sbjct: 276 RKLREAAKSITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHSIEDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH+VTEKG+GYP AE AADK HGV KFD  TGKQFK  + T S
Sbjct: 336 VTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDVETGKQFKQKSSTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAEVD  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTQYFAEALIKEAEVDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 456 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIGV LPP NKG  LE+GKG
Sbjct: 516 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGVALPPNNKGTTLEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ C+ A+ +L +  + +TVADARFCKPLD  LIR LAK HE 
Sbjct: 576 RILMEGNRVAILGYGSIVQQCVEAAGMLRTRDIYVTVADARFCKPLDTDLIRRLAKEHEF 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL+ +G+LDG +K R +VLPDRYIDHGSP DQ+ +AGL+ +H
Sbjct: 636 LITVEEGSIGGFCSHVSHFLSLNGILDGPLKLRSMVLPDRYIDHGSPLDQIQEAGLSSNH 695

Query: 541 IAATVFNILGQTREALEI 558
           IAATV ++LG+ +EAL+ 
Sbjct: 696 IAATVLSLLGKPKEALQF 713


>gi|153799536|gb|ABS50519.1| 1-deoxy-D-xylulose 5-phosphate synthase type II [Picea abies]
          Length = 740

 Score =  894 bits (2309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/558 (74%), Positives = 491/558 (87%), Gaps = 2/558 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES+YD FG GHSSTSISAGLGMAVGRDL  + N+VVAVIGDGA
Sbjct: 179 MHTIRQTSGLAGFPKRDESKYDAFGAGHSSTSISAGLGMAVGRDLLRKSNHVVAVIGDGA 238

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYL+S++I+ILNDNKQVSLPTATLDG  PPVGAL+ AL++LQS++ +
Sbjct: 239 MTAGQAYEAMNNSGYLESNLIIILNDNKQVSLPTATLDGAAPPVGALTRALTKLQSSKKI 298

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG+TKQIGG  HE+A+KVD+Y RG+I+ + S+LFEELGLYYIGPVDGHN++D+
Sbjct: 299 RKLREAAKGLTKQIGGQTHEMASKVDKYTRGIINPAASSLFEELGLYYIGPVDGHNIEDM 358

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE++K+   +GPVLIH+VTEKG+GYP AE+AADK HGV KFDPATGKQFKS +   S
Sbjct: 359 VTILEKIKSMPDSGPVLIHLVTEKGKGYPPAEEAADKLHGVVKFDPATGKQFKSKSSVLS 418

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAEVD  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 419 YTQYFAESLIAEAEVDSKIVAIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGL 478

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV +M
Sbjct: 479 ATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVAYM 538

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-ELPPGNKGIPLEVGK 419
           ACLPNMVVMAPSDE EL HMVATAAAIDDRPSCFR+PRGNG+G+  LP  NKG+PLE+G+
Sbjct: 539 ACLPNMVVMAPSDEVELMHMVATAAAIDDRPSCFRFPRGNGVGLSNLPLNNKGLPLEIGR 598

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           GRIL+EG RVA+LG+GT +Q+CLAA  +L E  G+ +T+ADARFCKPLD  LI+ LAK H
Sbjct: 599 GRILVEGTRVAILGFGTIIQNCLAAGKMLNEQAGISVTIADARFCKPLDGDLIKRLAKEH 658

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           E+L+TVEEGSIGGFGSHV  FLA +GLLDG +KWR +VLPDRYIDHG+P DQ+ +AGL+P
Sbjct: 659 EILLTVEEGSIGGFGSHVSHFLALNGLLDGKLKWRAMVLPDRYIDHGAPKDQIEEAGLSP 718

Query: 539 SHIAATVFNILGQTREAL 556
            HIAAT+ ++LG+  +AL
Sbjct: 719 KHIAATIMSLLGKPHDAL 736


>gi|297835124|ref|XP_002885444.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331284|gb|EFH61703.1| 1-deoxyxylulose-5-phosphate synthase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 655

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/556 (78%), Positives = 474/556 (85%), Gaps = 41/556 (7%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+T R ESE+D FGTGHSST+ISAGLGMAVGRDLKG  N+VVAVIGDGA
Sbjct: 138 MKTIRQTNGLSGYTNRRESEHDSFGTGHSSTTISAGLGMAVGRDLKGMNNSVVAVIGDGA 197

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTA LDGP PPVGALS ALS        
Sbjct: 198 MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTANLDGPTPPVGALSCALS-------- 249

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                            SG+GSTLFEELG +Y+GPVDGHN+DDL
Sbjct: 250 ---------------------------------SGTGSTLFEELGFHYVGPVDGHNIDDL 276

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE+VK+TK  GPVLIHVVTEKGRGYPYAE+A DKYHGV KFDPATGKQFK+ ++TQS
Sbjct: 277 VSILEKVKSTKPIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPATGKQFKNISKTQS 336

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EAL AEAE DK++VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 337 YTSCFVEALTAEAEADKNIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 396

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFM
Sbjct: 397 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFM 456

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++GKG
Sbjct: 457 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGKG 516

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSL KSHEV
Sbjct: 517 RILREGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLVKSHEV 576

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHVVQFLA DGLLDG +KWRP+VLPDRYI+HGSP DQLA+AGLT SH
Sbjct: 577 LITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIEHGSPMDQLAEAGLTASH 636

Query: 541 IAATVFNILGQTREAL 556
           IAAT  N++G  REAL
Sbjct: 637 IAATALNLMGTPREAL 652


>gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Hevea
           brasiliensis]
          Length = 711

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/558 (75%), Positives = 479/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES YD FG GHSSTSISAGLGMAV RDL G+ NNV++VIGDGA
Sbjct: 153 MHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDLLGKNNNVISVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LD+++IVILNDNKQVSLPTATLDGP  PVGALSSAL+++Q++   
Sbjct: 213 MTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTATLDGPATPVGALSSALAKIQASTQF 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 273 RKLREAAKSITKQIGGKTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNIEDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH+VTEKG+GYP AE AADK HGV KFD  TGKQFK  + T S
Sbjct: 333 VTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDVQTGKQFKPKSPTLS 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAE D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFAEALIKEAETDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+ +M
Sbjct: 453 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP NKG PLE+GKG
Sbjct: 513 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ C+ A+++L + G+ +TVADARFCKPLD  LIR LAK HE 
Sbjct: 573 RILMEGNRVAILGYGSIVQQCVEAASMLRTQGISVTVADARFCKPLDTDLIRQLAKEHEF 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL+  G+LDG +K R +VLPDRYIDHGSP DQ+ +AG++ +H
Sbjct: 633 LITVEEGSIGGFSSHVSHFLSLSGILDGPLKLRAMVLPDRYIDHGSPQDQIQEAGISSNH 692

Query: 541 IAATVFNILGQTREALEI 558
           I ATV ++LG+ +EAL+ 
Sbjct: 693 ITATVLSLLGKPKEALQF 710


>gi|46361693|gb|AAS89342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Taxus x media]
          Length = 742

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/558 (74%), Positives = 481/558 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQT G++GF KR+ESE+D FG GHSSTSISA LGMA GRDL G  N+ +AVIGDGA
Sbjct: 184 MSSIRQTSGIAGFPKRAESEHDAFGAGHSSTSISAALGMAAGRDLLGLPNHCIAVIGDGA 243

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++I+ILNDNKQVSLPTAT+DGP PPVGALS ALS++Q+++  
Sbjct: 244 MTAGQAYEAMNNAGFLDSNLIIILNDNKQVSLPTATVDGPAPPVGALSKALSKIQASKKF 303

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK +T+QIGGP HE+AAKVDEYARGMIS   STL EELGLYYIGPVDGH++ DL
Sbjct: 304 RLLREAAKDITQQIGGPTHEIAAKVDEYARGMISAPRSTLLEELGLYYIGPVDGHSIQDL 363

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAILE VK     GPVLIHVVTEKG+GYP AEKAAD+ HGV KFDP+TGKQFK+ + T S
Sbjct: 364 VAILENVKAMPAPGPVLIHVVTEKGKGYPPAEKAADRLHGVVKFDPSTGKQFKAKSPTLS 423

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE LIAEAE D  +V IHAAMGGGTGLN+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 424 YTQYFAEGLIAEAEKDDKIVGIHAAMGGGTGLNIFQKRFPERCFDVGIAEQHAVTFAAGL 483

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 484 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 543

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAP DEAEL HMVATAAAIDDRPSCFR+PRGNGIGV LPP NKG P+E+GKG
Sbjct: 544 ACLPNMIVMAPCDEAELIHMVATAAAIDDRPSCFRFPRGNGIGVPLPPNNKGTPVEIGKG 603

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA+LG+G+ +Q+CL A  +LE  G+ +TVADARFCKPLD  L+R L K HE+
Sbjct: 604 RILAEGTRVAILGFGSIIQNCLGAREMLEKQGISVTVADARFCKPLDGDLLRRLVKEHEI 663

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGSHV  FLA +GLLDG +KWRP+VLPDRYI+HG+P DQ+ +AGL+  H
Sbjct: 664 LITVEEGSVGGFGSHVSHFLALNGLLDGKLKWRPMVLPDRYIEHGAPKDQMDEAGLSSRH 723

Query: 541 IAATVFNILGQTREALEI 558
           IAATV +++G+ + A ++
Sbjct: 724 IAATVMSLMGKPQAAFDL 741


>gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 717

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/558 (75%), Positives = 482/558 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES++D FG GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGA
Sbjct: 155 MHTIRQTSGLAGFPKRDESDHDAFGAGHSSTSISAGLGMAVGRDLLGKSNHVISVIGDGA 214

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++IV+LNDNKQVSLPTATLDGP  PVGALSSALS+LQ++   
Sbjct: 215 MTAGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASSKF 274

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK VTKQIGG   E+AAKVDEYARGM+S  GSTLFEELGLYYIGPVDGHNV+DL
Sbjct: 275 RKLREAAKKVTKQIGGQTQEIAAKVDEYARGMMSAQGSTLFEELGLYYIGPVDGHNVEDL 334

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK     GPVL+H+VTEKG+GYP AE AAD+ HGV KFDP TGKQFKS A T S
Sbjct: 335 VTIFEKVKALPAPGPVLVHIVTEKGKGYPPAEAAADRMHGVVKFDPETGKQFKSKAPTLS 394

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAEVD  +VAIHAAMGGGTGLN F ++FP R FDVGIAEQHAVTFAAGL
Sbjct: 395 YTQYFAEALIKEAEVDSKIVAIHAAMGGGTGLNFFQKKFPERTFDVGIAEQHAVTFAAGL 454

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD+T+M
Sbjct: 455 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAVDRAGLVGADGPTHCGAFDITYM 514

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDE+EL HMVATAAAIDDRPSCFR+PRGNGIGVELP   KG P+E+GKG
Sbjct: 515 ACLPNMIVMAPSDESELIHMVATAAAIDDRPSCFRFPRGNGIGVELPLNLKGTPVEIGKG 574

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ C+ A+ +L+S  + +TVADARFCKPLD  LIR LAK HE 
Sbjct: 575 RILMEGTRVAILGYGSIVQQCVDAAHMLKSRDIAVTVADARFCKPLDTELIRRLAKEHEY 634

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV  FL+  GLLDG +K R + LPDRYIDHG+P DQ+ +AGL+  H
Sbjct: 635 LITIEEGSIGGFGSHVAHFLSLSGLLDGNLKLRAMALPDRYIDHGAPQDQIEEAGLSSWH 694

Query: 541 IAATVFNILGQTREALEI 558
           I+ATV ++LG+++EALE 
Sbjct: 695 ISATVLSLLGRSKEALEF 712


>gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase [Catharanthus roseus]
          Length = 716

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/558 (74%), Positives = 481/558 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES YD FG GHSSTSISAGLGMAV RD+ G+ NNV++VIGDGA
Sbjct: 158 MHTIRQTSGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVARDILGKNNNVISVIGDGA 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LD+++IV+LNDNKQVSLPTATLDGP  PVGALSSALS+LQ++   
Sbjct: 218 MTAGQAYEAMNNAGFLDANLIVVLNDNKQVSLPTATLDGPATPVGALSSALSKLQASPKF 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGM+S +GSTLFEELGLYYIGPVDGH+++DL
Sbjct: 278 RQLREAAKSITKQIGPQAHEVAAKVDEYARGMLSATGSTLFEELGLYYIGPVDGHSIEDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH+VTEKG+GYP AE AADK HGV KFDP TGKQFKS + T S
Sbjct: 338 VTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEVAADKMHGVVKFDPKTGKQFKSKSPTLS 397

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE+D  ++AIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 398 YTQYFAESLIKEAEIDNKIIAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 457

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 458 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 517

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAEL HMVATAA IDDRP CFR+PRGNGIGV LPP NKG PLE+GKG
Sbjct: 518 ACLPNMIVMAPSDEAELMHMVATAAKIDDRPCCFRFPRGNGIGVALPPNNKGTPLEIGKG 577

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ CL A+ +L+S+ +  TVADA+FCKPLD  LI++LAK HE+
Sbjct: 578 RILVEGSRVAILGYGSIVQQCLGAAEMLKSHNVSPTVADAKFCKPLDGDLIKTLAKEHEI 637

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL+  G+LDG +K R L LPDRYIDHG+P DQ+ +AGL+  H
Sbjct: 638 LITVEEGSIGGFGSHVTHFLSLTGILDGPIKVRSLFLPDRYIDHGAPVDQIEEAGLSSRH 697

Query: 541 IAATVFNILGQTREALEI 558
           I AT+ ++LG+ +EAL++
Sbjct: 698 ICATILSLLGKPKEALKL 715


>gi|242043226|ref|XP_002459484.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
 gi|241922861|gb|EER96005.1| hypothetical protein SORBIDRAFT_02g005380 [Sorghum bicolor]
          Length = 730

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/558 (75%), Positives = 479/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL GRKN+VV+VIGDGA
Sbjct: 172 MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAALGMAVARDLLGRKNHVVSVIGDGA 231

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+G+LD++MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+   
Sbjct: 232 MTAGQAYEAMNNSGFLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKF 291

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK VTKQIGGP HE+AAKVDEYARGM+S SGS+LFEELGLYYIGPVDGH+V+DL
Sbjct: 292 RRLREAAKSVTKQIGGPTHEVAAKVDEYARGMMSASGSSLFEELGLYYIGPVDGHSVEDL 351

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIHVVTEKG+GYP AE AAD+ HGV KF+P+TGKQ KS + T S
Sbjct: 352 VTIFEKVKSMPAPGPVLIHVVTEKGKGYPPAEAAADRMHGVVKFEPSTGKQLKSKSSTLS 411

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EA+ D  VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 412 YTQYFAESLIREADADDKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 471

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDVT+M
Sbjct: 472 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVTYM 531

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PRGNG+G  LP GNKG P+EVG+G
Sbjct: 532 ACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGVGAVLPAGNKGTPMEVGRG 591

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+ G RVALLGYGT VQ+CL A+  L+   + +TVADARFCKPLD  LIR LA  HEV
Sbjct: 592 RVLVGGNRVALLGYGTMVQACLKAAEALKEQDVYVTVADARFCKPLDTGLIRELAAEHEV 651

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT EEGSIGGFGSHV  +L+  GLLDG +K R + LPDRYIDHG+P DQ+ +AGLTP H
Sbjct: 652 LITAEEGSIGGFGSHVAHYLSLTGLLDGPLKLRSMFLPDRYIDHGAPQDQMEEAGLTPRH 711

Query: 541 IAATVFNILGQTREALEI 558
           IAATV ++LG+  EA+++
Sbjct: 712 IAATVLSLLGRPMEAMQL 729


>gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synthase [Chrysanthemum x morifolium]
          Length = 669

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/561 (75%), Positives = 484/561 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+TMR+T GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGA
Sbjct: 108 MNTMRKTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVGRDLLGKNNNVISVIGDGA 167

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++IV+LNDNKQVSLPTATLDGP  PVGALSS L++LQ++   
Sbjct: 168 MTAGQAYEAMNNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSSTLAKLQASPKF 227

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DL
Sbjct: 228 RKLREAAKSITKQIGPQAHEVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNVEDL 287

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIH+VTEKG+G+P AE AAD+ HGV KFD  TGKQFK+ + T S
Sbjct: 288 VTIFEKVKSMPAPGPVLIHIVTEKGKGHPPAEAAADRMHGVVKFDVGTGKQFKTKSPTLS 347

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAEVD  VVAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 348 YTQYFAEALIKEAEVDNKVVAIHAAMGGGTGLNYFQKKFPDRCFDVGIAEQHAVTFAAGL 407

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 408 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 467

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL +MVATAAAIDDRPSCFR+PRGNGIGV LP  NKG+P+EVGKG
Sbjct: 468 ACLPNMVVMAPSDEAELINMVATAAAIDDRPSCFRFPRGNGIGVPLPLNNKGVPIEVGKG 527

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ CL A++LL+++ +  TVADARFCKPLD  LI+ LA  HEV
Sbjct: 528 RILLEGTRVAILGYGSIVQQCLGAASLLQAHNISATVADARFCKPLDAELIKRLANEHEV 587

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FL+ +GLLDG +K R + LPDRYIDHG+P DQL +AGL+  H
Sbjct: 588 LLTVEEGSIGGFGSHVAHFLSLNGLLDGKLKLRAMTLPDRYIDHGAPQDQLEEAGLSSKH 647

Query: 541 IAATVFNILGQTREALEIMSF 561
           I +T+ ++LG+ +EAL+  S 
Sbjct: 648 ICSTLLSLLGKPKEALQYKSI 668


>gi|356529695|ref|XP_003533424.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 712

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/556 (75%), Positives = 478/556 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES YD FGTGHSSTSISAGLGMAV RDL G+KN++V+VIGDGA
Sbjct: 154 MHTIRKTSGLAGFPKREESVYDVFGTGHSSTSISAGLGMAVARDLLGKKNSIVSVIGDGA 213

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS+MI+ILNDNKQVSLPTAT+DGP  PVGALSSALS++Q++   
Sbjct: 214 MTAGQAYEAMNNAGFLDSNMIIILNDNKQVSLPTATIDGPATPVGALSSALSKIQASTKF 273

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG+TKQIGG  H+LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 274 RKLREAAKGITKQIGGTTHQLAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIEDL 333

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE+VK     GP LIHVVTEKG+GYP AE AADK HGV KF P +G Q K  + T +
Sbjct: 334 VTILEKVKEMPAPGPTLIHVVTEKGKGYPPAEVAADKMHGVVKFVPTSGHQLKPKSSTLT 393

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE+D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 394 YTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPDRCFDVGIAEQHAVTFAAGL 453

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 454 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 513

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKG
Sbjct: 514 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGASLPLNNKGTPLEIGKG 573

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +G RVA+LGYG+ VQ CL A+ +L+   + +TVADARFCKPLD  LI+ L K HE 
Sbjct: 574 RILRQGSRVAILGYGSVVQQCLQAAQMLKPLDISVTVADARFCKPLDTDLIKLLGKEHEF 633

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FL+  GLLDG +KWRP++LPDRYI+HGSP DQ  +AGL+  +
Sbjct: 634 LLTVEEGSIGGFGSHVSHFLSIVGLLDGPLKWRPMMLPDRYIEHGSPQDQTEEAGLSSKN 693

Query: 541 IAATVFNILGQTREAL 556
           IAATV ++L + +EAL
Sbjct: 694 IAATVLSLLERPKEAL 709


>gi|164604986|dbj|BAF98289.1| 1-deoxy-D-xylulose 5-phosphate synthase [Hevea brasiliensis]
          Length = 711

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/558 (75%), Positives = 478/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES YD FG GHSSTSISAGLGMAV RDL G+ NNV++VIGDGA
Sbjct: 153 MHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDLLGKNNNVISVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EAMNNAG+LD+++IVILNDNKQVSLPTATLDGP  PVGALSSAL+++Q++   
Sbjct: 213 MTAGQAHEAMNNAGFLDANLIVILNDNKQVSLPTATLDGPATPVGALSSALAKIQASTQF 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 273 RKLREAAKSITKQIGGKTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNIEDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH+VTEKG+GYP AE AADK HGV KFD  TGKQFK  + T S
Sbjct: 333 VTIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDVQTGKQFKPKSPTLS 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAE D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFAEALIKEAETDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+ +M
Sbjct: 453 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP NKG PLE+GKG
Sbjct: 513 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGAALPPNNKGTPLEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ C+ A+++L + G+ +TVADARFCKPLD  LIR LAK HE 
Sbjct: 573 RILMEGNRVAILGYGSIVQQCVEAASMLRTQGISVTVADARFCKPLDTDLIRQLAKEHEF 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL+  G+L G +K R +VLPDRYIDHGSP DQ+ +AG++ +H
Sbjct: 633 LITVEEGSIGGFSSHVSHFLSLSGILAGPLKLRAMVLPDRYIDHGSPQDQIQEAGISSNH 692

Query: 541 IAATVFNILGQTREALEI 558
           I ATV ++LG+ +EAL+ 
Sbjct: 693 ITATVLSLLGKPKEALQF 710


>gi|225446170|ref|XP_002271585.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|297735326|emb|CBI17766.3| unnamed protein product [Vitis vinifera]
          Length = 735

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/561 (74%), Positives = 481/561 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES YD FG GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGA
Sbjct: 175 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVGRDLLGKNNHVISVIGDGA 234

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDN QVSLPTAT+DGP PPVGALS AL+ LQS+R  
Sbjct: 235 MTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKF 294

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG TKQ+GG  HE+AAKVDEY RGM+ GS + LFEELGLYYIGPVDGHNV+DL
Sbjct: 295 RQLREAAKGFTKQVGGQAHEIAAKVDEYMRGMVGGSNACLFEELGLYYIGPVDGHNVEDL 354

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL++V+     GPVL+HV+TEKG+GY  AE AADK HGV KFD  +GKQ K+ ++T+S
Sbjct: 355 VHILKKVRAMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTRS 414

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D++++AIHAAMGGGTGLNLF + FP RCFDVGIAEQHAVTFAAGL
Sbjct: 415 YTQYFAESLIAEAERDENIIAIHAAMGGGTGLNLFQKHFPDRCFDVGIAEQHAVTFAAGL 474

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 475 ATEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFM 534

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS E+EL HMVATAAAIDDRPSCFRYPRGNGIG  LP  NKG PLE+GKG
Sbjct: 535 ACLPNMVVMAPSCESELMHMVATAAAIDDRPSCFRYPRGNGIGSILPQNNKGTPLEIGKG 594

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQ+CLAAS LL+  G+  TVADARFCKPLD  LIR LA+ HEV
Sbjct: 595 RVLKEGSRVAILGYGTVVQNCLAASKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEV 654

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL  +GLLDGT+KWRP++LPDRYI+HGS  +Q+ +AGL+  H
Sbjct: 655 LITVEEGSIGGFSSHVSHFLGLNGLLDGTLKWRPMMLPDRYINHGSQTEQVEEAGLSSRH 714

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATV +++G+ +++L ++  
Sbjct: 715 IAATVLSLIGENKDSLHLLKL 735


>gi|449432964|ref|XP_004134268.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 721

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/557 (75%), Positives = 482/557 (86%), Gaps = 1/557 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+KN+V++VIGDGA
Sbjct: 153 MHTLRQTSGLAGFPKRDESIHDAFGAGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD++MIVILNDNKQVSLPTATLDGP  PVGALSSAL++LQ++   
Sbjct: 213 MTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSALTKLQASTQF 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   H +AAKVDEYARGMISGSGST FEELGLYYIGPVDGHNV DL
Sbjct: 273 RKLREAAKTITKQIGKQTHGVAAKVDEYARGMISGSGSTFFEELGLYYIGPVDGHNVGDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE+VK+    GPVLIH++TEKG+GYP AE AADK HGV KFDP TGKQFK+ + T S
Sbjct: 333 VTILEKVKSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGVVKFDPKTGKQFKTKSPTLS 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE+D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFAESLIKEAELDDKIVAIHAAMGGGTGLNYFQKKFPQRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCAIYSSF+QR +DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 453 ATEGIKPFCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAP+DEAEL HMVATAA IDDRPSCFR+PRGNGIGV +PP  KG P+E+GKG
Sbjct: 513 ACLPNMIVMAPADEAELIHMVATAAEIDDRPSCFRFPRGNGIGVVVPPNFKGTPIEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI++EG RVA+LGYG+ VQ C+ AS LL++ G+  TVADARFCKPLD  LIR LAK HE+
Sbjct: 573 RIVMEGTRVAILGYGSIVQQCVEASELLKTRGITPTVADARFCKPLDTQLIRQLAKEHEI 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDG-TVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LITVEEGSIGGFGSHV  FL+  G+LD   +K R +VLPDRYIDHGSP DQ+ +AGL+  
Sbjct: 633 LITVEEGSIGGFGSHVSYFLSVTGILDQHHLKLRSMVLPDRYIDHGSPGDQMEEAGLSSE 692

Query: 540 HIAATVFNILGQTREAL 556
           HIAATV  ++G+++EAL
Sbjct: 693 HIAATVLTLMGRSKEAL 709


>gi|209360747|gb|ACI43010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
          Length = 715

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/561 (74%), Positives = 482/561 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGA
Sbjct: 154 MHTIRKTSGLAGFPKRDESAHDAFGAGHSSTSISAGLGMAVGRDLLGKTNNVISVIGDGA 213

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG+AYEA+NNAG+LDS++IV+LNDNKQVSLPTATLDGP  PVGALS ALS+LQ++   
Sbjct: 214 MTAGRAYEAINNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSGALSKLQASTKF 273

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DL
Sbjct: 274 RKLREAAKSITKQIGPQAHEVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNVEDL 333

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIH+VTEKG+GYP AE AAD+ HGV KFD  TGKQFK+ + T S
Sbjct: 334 VNIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDVPTGKQFKTKSPTLS 393

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D  +VAIHAAMGGGTGLN F ++ P RCFDVGIAEQHAVTFAAGL
Sbjct: 394 YTQYFAESLIKEAEADNKIVAIHAAMGGGTGLNYFQKKCPERCFDVGIAEQHAVTFAAGL 453

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 454 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 513

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP NKGIP+EVGKG
Sbjct: 514 ACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGIGAPLPPNNKGIPIEVGKG 573

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ CL A++LL+++ +  TVADARFCKPLD  LIR LA  HEV
Sbjct: 574 RILLEGTRVAILGYGSIVQECLGAASLLQAHNVSATVADARFCKPLDTGLIRRLANEHEV 633

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FL+ +GLLDG +K R + LPD+YIDHG+P DQL +AGL+  H
Sbjct: 634 LLTVEEGSIGGFGSHVAHFLSLNGLLDGKLKLRAMTLPDKYIDHGAPQDQLEEAGLSSKH 693

Query: 541 IAATVFNILGQTREALEIMSF 561
           I +++ ++LG+ +EAL+  S 
Sbjct: 694 ICSSLLSLLGKPKEALQYKSI 714


>gi|51234083|gb|AAT97962.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 2 [Solanum
           habrochaites]
          Length = 714

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/558 (75%), Positives = 480/558 (86%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMR+T GL+ F KR ES +D FG GHSSTSISAGLGMAV RDL G  N+V++VIGDGA
Sbjct: 156 MHTMRKTSGLAPFPKRDESAHDAFGAGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++IVILNDNKQVSLPTATLDGP  PVGALSSALS+LQ++   
Sbjct: 216 MTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASLKF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGM+S SGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 276 RQLREAAKTITKQIGPQAHEVAAKVDEYARGMLSASGSTLFEELGLYYIGPVDGHNIEDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + ILE+VK     GPVLIH+VTEKG+GY  AE A DK HGVA+FDP TGKQFK+ + T S
Sbjct: 336 ITILEKVKEMPAPGPVLIHIVTEKGKGYLPAEAADDKMHGVAQFDPKTGKQFKAKSPTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTRYFAESLIKEAENDNKIVAIHAAMGGGTGLNYFQKQFPERCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 456 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LP  NKGIP+EVGKG
Sbjct: 516 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGAILPLNNKGIPIEVGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVA+LGYG+ +Q CL A+ +L S+ +R+TVADARFCKPLD  LIRSLAK HE+
Sbjct: 576 RILREGERVAILGYGSIIQQCLGAADILNSHNVRVTVADARFCKPLDADLIRSLAKEHEI 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL+ + +LDG +K R ++LPDRYIDHGSP DQ+  AGL+  H
Sbjct: 636 LITVEEGSIGGFGSHVSHFLSLNSILDGPLKLRSMLLPDRYIDHGSPVDQIEAAGLSSRH 695

Query: 541 IAATVFNILGQTREALEI 558
           I++TV  +LG+ +EA+ +
Sbjct: 696 ISSTVLTLLGRPKEAMVV 713


>gi|225469658|ref|XP_002266925.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic [Vitis vinifera]
 gi|296090521|emb|CBI40852.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/558 (75%), Positives = 479/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+ N+VVAVIGDGA
Sbjct: 156 MHTIRKTSGLAGFPKREESVHDAFGVGHSSTSISAGLGMAVGRDLLGKTNSVVAVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD++MI+ILNDNKQVSLPTATLDGP  PVGALS  L++LQS+   
Sbjct: 216 MTAGQAYEAMNNAGYLDTNMIIILNDNKQVSLPTATLDGPAIPVGALSRTLTKLQSSTKF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQ+GG   E+AAKVDEYARG++S SGSTLFEELGLYYIGPVDGHNVDDL
Sbjct: 276 RKLREAAKSITKQLGGQTFEVAAKVDEYARGLLSASGSTLFEELGLYYIGPVDGHNVDDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH+VTEKG+GYP AE AAD+ HGV KFDP +G+QFKS + T  
Sbjct: 336 VGIFQKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDPKSGQQFKSKSPTLP 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EA+VD  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTRYFAESLIGEAKVDDKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQV+HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 456 ATEGLKPFCAIYSSFLQRGYDQVIHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP NKG PLE+GKG
Sbjct: 516 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGAVLPPDNKGTPLEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVALLGYG+ VQ C+ A+++L S  + +TV DARFCKPLD  LIR LAK HE+
Sbjct: 576 RILAEGHRVALLGYGSIVQQCVEAASILRSQNIFVTVVDARFCKPLDGDLIRRLAKEHEI 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL  +G++DG +K R +VLPDRYIDHGSP DQ+ +AGL+  H
Sbjct: 636 LITVEEGSIGGFGSHVSHFLCLNGIMDGPLKLRAMVLPDRYIDHGSPEDQIQEAGLSSKH 695

Query: 541 IAATVFNILGQTREALEI 558
           I+ATV ++LG+ +EAL +
Sbjct: 696 ISATVLSLLGRQKEALTL 713


>gi|224071349|ref|XP_002303416.1| predicted protein [Populus trichocarpa]
 gi|222840848|gb|EEE78395.1| predicted protein [Populus trichocarpa]
          Length = 692

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/556 (75%), Positives = 477/556 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES YD FG GHSSTSISAGLGMAV RDL G+ N+V++VIGDGA
Sbjct: 133 MHTIRKTSGLAGFPKRDESVYDAFGAGHSSTSISAGLGMAVARDLLGKSNHVISVIGDGA 192

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++IVILNDNKQVSLPTATLDGP  PVGALSS L++LQ++   
Sbjct: 193 MTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLTKLQASAKF 252

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+L E AKG+TKQI G  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGH+++DL
Sbjct: 253 RKLHEAAKGITKQIDGQTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHSIEDL 312

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I + VK     GPVLIH++TEKG+GYP AE AADK HGV KFD  +G+QFK  + T S
Sbjct: 313 VTIFQNVKAMPAPGPVLIHIITEKGKGYPPAEAAADKMHGVVKFDVKSGQQFKLKSSTLS 372

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAEVD  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 373 YTRYFAESLIKEAEVDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 432

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 433 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 492

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP NKGI LE+GKG
Sbjct: 493 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGTVLPPNNKGIALEIGKG 552

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA++GYG+ VQ C  A+++L +  + +TVADARFCKPLD  LIR LAK HE+
Sbjct: 553 RILMEGNRVAIMGYGSIVQQCAEAASMLRTQDISVTVADARFCKPLDTNLIRQLAKEHEI 612

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL+  G+LDG +K R +VLPDRYIDHGSP DQ+ +AGL+ +H
Sbjct: 613 LITVEEGSIGGFGSHVSHFLSSTGILDGPLKLRAMVLPDRYIDHGSPQDQIQEAGLSSNH 672

Query: 541 IAATVFNILGQTREAL 556
           I ATV ++LG+ +EAL
Sbjct: 673 ITATVLSMLGKPKEAL 688


>gi|356523941|ref|XP_003530592.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/556 (75%), Positives = 477/556 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R++ GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N++++VIGDGA
Sbjct: 156 MHTIRKSSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAGQAYEAMNNAG+LDS+MIV+LNDNKQVSLPTATLDGP  PVGALSSALS++Q++   
Sbjct: 216 LTAGQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSSALSKIQASSEF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 276 RKLREAAKTITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNIEDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK     GPVLIHVVTEKG+GYP AEKAAD+ HGV KFDP TG+QFK+   T S
Sbjct: 336 VTIFEKVKAMPAPGPVLIHVVTEKGKGYPPAEKAADRMHGVVKFDPKTGQQFKAKTSTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE DK +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTQYFAESLIKEAENDKKIVAIHAAMGGGTGLNYFHKRFPKRCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+ +M
Sbjct: 456 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LP  NKG  LE+GKG
Sbjct: 516 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGATLPLNNKGTSLEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ C  AS +L+  G+ +TVADARFCKPLD  LIR LAK HE+
Sbjct: 576 RILVEGSRVAILGYGSVVQQCRQASEMLKELGIDVTVADARFCKPLDTGLIRLLAKEHEI 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFL+  G+LDG +KWR ++LPDRYI+HGSP  Q+ +AGL+   
Sbjct: 636 LITVEEGSIGGFGSHVSQFLSLSGILDGPLKWRAMMLPDRYIEHGSPQVQIEEAGLSSKQ 695

Query: 541 IAATVFNILGQTREAL 556
           IAATV +++ +  EAL
Sbjct: 696 IAATVLSLMERPNEAL 711


>gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synthase [Stevia rebaudiana]
          Length = 715

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/561 (74%), Positives = 481/561 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGA
Sbjct: 154 MHTIRKTSGLAGFPKRDESAHDAFGAGHSSTSISAGLGMAVGRDLLGKTNNVISVIGDGA 213

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG+AYEA+NNAG+LDS++IV+LNDNKQVSLPTATLDGP  PVGALS ALS+LQ++   
Sbjct: 214 MTAGRAYEAINNAGFLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSGALSKLQASTKF 273

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DL
Sbjct: 274 RKLREAAKSITKQIGPQAHEVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNVEDL 333

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIH+VTEKG+GYP AE AAD+ HGV KFD  TGKQFK+ + T S
Sbjct: 334 VNIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDVPTGKQFKTKSPTLS 393

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D  +VAIHAAMGGGTGLN F ++ P RCFDVGIAEQHAVTFAAGL
Sbjct: 394 YTQYFAESLIKEAEADNKIVAIHAAMGGGTGLNYFQKKCPERCFDVGIAEQHAVTFAAGL 453

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 454 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 513

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LPP NKGIP+EVGKG
Sbjct: 514 ACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGIGAPLPPNNKGIPIEVGKG 573

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ CL A++LL+++ +  TVADARFCKPLD  LIR LA  HEV
Sbjct: 574 RILLEGTRVAILGYGSIVQECLGAASLLQAHNVSATVADARFCKPLDTGLIRRLANEHEV 633

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FL+ +GLLDG +K R + LPD+YIDHG+P DQL + GL+  H
Sbjct: 634 LLTVEEGSIGGFGSHVAHFLSINGLLDGKLKLRAMTLPDKYIDHGAPQDQLEETGLSSKH 693

Query: 541 IAATVFNILGQTREALEIMSF 561
           I +++ ++LG+ +EAL+  S 
Sbjct: 694 ICSSLLSLLGKPKEALQYKSI 714


>gi|356523939|ref|XP_003530591.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  882 bits (2280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/556 (74%), Positives = 478/556 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N++++VIGDGA
Sbjct: 156 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAGQAYEAMNNAG+LDS+MIV+LNDNKQVSLPTATLDGP  PVGALSSALS++Q++   
Sbjct: 216 LTAGQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSSALSKIQASSEF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  H++AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 276 RKLREAAKTITKQIGGQTHQVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHNIEDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK     GPVLIHVVTEKG+GYP AEKAAD+ HGV KFDP TG Q K+ + T S
Sbjct: 336 VTIFEKVKAMPAPGPVLIHVVTEKGKGYPPAEKAADRMHGVVKFDPKTGHQLKAKSSTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE+D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFQKKFPERCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD+T+M
Sbjct: 456 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           +CLPNMVVMAPSDE EL HMVATAAAIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKG
Sbjct: 516 SCLPNMVVMAPSDETELMHMVATAAAIDDRPSCFRFPRGNGIGATLPLNNKGTPLEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG+ VQ C  AS +L+  G+ +TVADARFCKPLD  LIR LAK HE+
Sbjct: 576 RILVEGSRVAILGYGSVVQQCRQASEMLKELGIDVTVADARFCKPLDTGLIRLLAKEHEI 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFL+  G+LDG +KWR ++LPDRYI+HGSP  Q+ +AGL+   
Sbjct: 636 LITVEEGSIGGFGSHVSQFLSLSGILDGPLKWRAMMLPDRYIEHGSPQVQIEEAGLSSKQ 695

Query: 541 IAATVFNILGQTREAL 556
           IAATV +++ + ++AL
Sbjct: 696 IAATVLSLMERPKQAL 711


>gi|224117606|ref|XP_002331678.1| predicted protein [Populus trichocarpa]
 gi|222874097|gb|EEF11228.1| predicted protein [Populus trichocarpa]
          Length = 646

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/550 (76%), Positives = 469/550 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ESE+D FG GHSSTSISA LGMAVGRDL G+ N+V+AVIGDGA
Sbjct: 97  MHTIRQTFGLAGFPKREESEHDAFGAGHSSTSISAALGMAVGRDLLGKDNHVIAVIGDGA 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDN+QVSLPTAT+DGP PPVGALS AL+RL S+R  
Sbjct: 157 MTAGQAYEAMNNAGYLDSNLIIILNDNRQVSLPTATVDGPAPPVGALSRALTRLHSSRKF 216

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG+TKQIGG   E+AAKVD Y RGM   SG+ LFEELGLYYIGPVDGHNV+DL
Sbjct: 217 RQLREAAKGITKQIGGQTQEIAAKVDSYMRGMTGASGACLFEELGLYYIGPVDGHNVEDL 276

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L++VK     GPVLIHV+TEKG+GY  AE AADK HGV KFD  TGKQ KS + T S
Sbjct: 277 VDLLKKVKAMPAPGPVLIHVITEKGKGYTPAEVAADKMHGVVKFDTKTGKQLKSKSNTLS 336

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D  +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 337 YTQYFAESLIAEAEKDDKIVAIHAAMGGGTGLNLFQKRFPYRCFDVGIAEQHAVTFAAGL 396

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFM
Sbjct: 397 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDTTFM 456

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMAPSDE EL HMVATAAAIDDRPSC RYPRGNGIG  +PP NKG PLEVGKG
Sbjct: 457 ASLPNMVVMAPSDETELIHMVATAAAIDDRPSCLRYPRGNGIGSIIPPNNKGTPLEVGKG 516

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQSC+ A+ LLE  G+  TVADARFCKPLD  LIR LA+ HEV
Sbjct: 517 RVLREGSRVAILGYGTIVQSCMQAAKLLEETGISATVADARFCKPLDGELIRQLAQEHEV 576

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL+ +GLLDG +KWRP++LPDRYIDHGS  DQ+ +AGL+P H
Sbjct: 577 LITVEEGSIGGFSSHVSHFLSLNGLLDGNIKWRPMMLPDRYIDHGSQTDQIEEAGLSPKH 636

Query: 541 IAATVFNILG 550
           IA+T  +++G
Sbjct: 637 IASTAMSLVG 646


>gi|61656097|gb|AAX49359.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Zea mays]
          Length = 481

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/477 (87%), Positives = 451/477 (94%)

Query: 84  LNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAA 143
           LNDNKQVSLPTATLDGP+PPVGALSSALS+LQS+RPLRELREVAKGVTKQIGG +HELAA
Sbjct: 1   LNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELAA 60

Query: 144 KVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTE 203
           KVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPVLIHVVTE
Sbjct: 61  KVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTE 120

Query: 204 KGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIH 263
           KGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D  +VAIH
Sbjct: 121 KGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIH 180

Query: 264 AAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQV 323
           AAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQV
Sbjct: 181 AAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQV 240

Query: 324 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVAT 383
           VHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAEL HMVAT
Sbjct: 241 VHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVAT 300

Query: 384 AAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLA 443
           AAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+AVQ CL 
Sbjct: 301 AAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLT 360

Query: 444 ASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQD 503
           A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH+ QF+A D
Sbjct: 361 AASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHIAQFMALD 420

Query: 504 GLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 560
           GLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL IM+
Sbjct: 421 GLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 477


>gi|399966672|gb|AFP65821.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Eriobotrya
           japonica]
          Length = 483

 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/483 (91%), Positives = 465/483 (96%)

Query: 78  SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGP 137
           SDMI+ILNDNKQVSLPTA+LDGPIPPVGALSSALSRL SNRPLRELREVAKGVTKQIGG 
Sbjct: 1   SDMIIILNDNKQVSLPTASLDGPIPPVGALSSALSRLLSNRPLRELREVAKGVTKQIGGS 60

Query: 138 MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVL 197
           +H LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDL++IL+EVK TKTTGPVL
Sbjct: 61  VHNLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLISILKEVKITKTTGPVL 120

Query: 198 IHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDK 257
           I +VTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK+SA TQSYTTYFAEALIAEAE DK
Sbjct: 121 IRLVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKASASTQSYTTYFAEALIAEAEADK 180

Query: 258 DVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQ 317
           D+VAIHAAMGGGTG+NLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+Q
Sbjct: 181 DIVAIHAAMGGGTGMNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQ 240

Query: 318 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 377
           RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH GSFDVTFMACLPNMVVMAPSDEAEL
Sbjct: 241 RAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHSGSFDVTFMACLPNMVVMAPSDEAEL 300

Query: 378 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 437
           F MVATAAAIDDRPSCFRYPRGNG+GVELP GNKG PLEVGKGRILIEGERVALLGYG A
Sbjct: 301 FDMVATAAAIDDRPSCFRYPRGNGVGVELPLGNKGTPLEVGKGRILIEGERVALLGYGAA 360

Query: 438 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 497
           VQSCLAAS+L+ES+GLRLTVADARFCKPLD ALIRSLAKSHE LITVEEGS+GGFGSHV 
Sbjct: 361 VQSCLAASSLVESHGLRLTVADARFCKPLDRALIRSLAKSHEFLITVEEGSVGGFGSHVA 420

Query: 498 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 557
            FLA DGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQTREALE
Sbjct: 421 HFLALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNMLGQTREALE 480

Query: 558 IMS 560
           IMS
Sbjct: 481 IMS 483


>gi|291170708|gb|ADD82535.1| 1-deoxyxylulose-5-phosphate synthase [Narcissus tazetta var.
           chinensis]
          Length = 634

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/558 (74%), Positives = 475/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N+V++VIGDGA
Sbjct: 76  MHTLRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGKGNHVISVIGDGA 135

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++IV+LNDNKQVSLPTATLDGP  PVGALS AL++LQ++   
Sbjct: 136 MTAGQAYEAMNNAGYLDSNLIVVLNDNKQVSLPTATLDGPATPVGALSGALAKLQASTKF 195

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  HE+AAKVDEYARGMIS SG+ LFEELGLYYIGPVDGHNV+DL
Sbjct: 196 RQLREAAKSITKQIGGQAHEVAAKVDEYARGMISASGACLFEELGLYYIGPVDGHNVEDL 255

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAI ++VK   + GPVLIH+VTEKG+GYP AE AADK HGV KFDP TGKQFK+   T S
Sbjct: 256 VAIFKKVKAMPSRGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPKTGKQFKTKFPTLS 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+L+ EAEVD  ++AIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 316 YTQYFAESLVKEAEVDDKIIAIHAAMGGGTGLNFFQKKFPDRCFDVGIAEQHAVTFAAGL 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FDVT+M
Sbjct: 376 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDVTYM 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNG+GV LP   KG PLE+GKG
Sbjct: 436 ACLPNMIVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGVGVALPSDYKGTPLEIGKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVA+LGYG+ VQSCL A+ LL  +G+  TVAD RFCKPLD  LIR L   HE+
Sbjct: 496 RILREGERVAILGYGSIVQSCLKAADLLREHGISATVADGRFCKPLDSELIRRLVNEHEI 555

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT EEGSIGGF SHV  FL+ +GLLDG +K R +VLPDRYIDHG+  DQ+ +AGL+  H
Sbjct: 556 LITAEEGSIGGFASHVSHFLSLNGLLDGHLKLRSMVLPDRYIDHGALKDQIEEAGLSSKH 615

Query: 541 IAATVFNILGQTREALEI 558
           IA TV ++LG+  EA ++
Sbjct: 616 IAGTVLSLLGRPMEAFQL 633


>gi|408833346|gb|AFU93069.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Eucommia
           ulmoides]
          Length = 713

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/558 (73%), Positives = 475/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES YD FG GHSSTSISAGLGMA+ RDL G+ NNV++VIGDGA
Sbjct: 155 MHTIRKTSGLAGFPKRDESTYDAFGAGHSSTSISAGLGMAIARDLLGKNNNVISVIGDGA 214

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEA+NNAG+LDS++IV+LNDNKQVSLPTAT+DGP  PVGALSSALS+LQ++   
Sbjct: 215 MTAGQAYEALNNAGFLDSNLIVVLNDNKQVSLPTATIDGPATPVGALSSALSKLQASPKF 274

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGM S +GSTLFEELGLYYIGPVDGHN++DL
Sbjct: 275 RQLREAAKTITKQIGPQAHEVAAKVDEYARGMFSATGSTLFEELGLYYIGPVDGHNIEDL 334

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH+VTEKG+GYP AE A DK HGV KFDPATGKQFK  A T S
Sbjct: 335 VTIFQKVKEMPAPGPVLIHIVTEKGKGYPPAESAPDKMHGVVKFDPATGKQFKVKAPTLS 394

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 395 YTQYFAESLIKEAEADSKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 454

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+ +M
Sbjct: 455 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDIAYM 514

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAA IDDRPSCFR+PRGNG+G  LP  NKG P+E+GKG
Sbjct: 515 ACLPNMVVMAPADEAELMHMVATAAVIDDRPSCFRFPRGNGVGAVLPLNNKGTPMEIGKG 574

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RILIEG RVA+LGYG+ VQ CL A+ALL+   + +TVADARFCKPLD  LI+ L   HE+
Sbjct: 575 RILIEGSRVAILGYGSIVQQCLGAAALLKDRNVSVTVADARFCKPLDADLIKRLTHEHEI 634

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGS+GGFGSHV  FL+ +G+LDG +K R +VLPDRYIDHGSP DQ+ +AGL+  H
Sbjct: 635 LLTVEEGSVGGFGSHVSHFLSLNGILDGPLKLRAMVLPDRYIDHGSPQDQIEEAGLSSRH 694

Query: 541 IAATVFNILGQTREALEI 558
           I  T+ ++LG+ +EAL++
Sbjct: 695 ICGTILSLLGRPKEALQL 712


>gi|256619606|emb|CAZ66649.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 precursor [Solanum
           lycopersicum]
          Length = 714

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/558 (75%), Positives = 478/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMR+T GL+ F KR ES +D FG GHSSTSISAGLGMAV RDL G  N+V++VIGDGA
Sbjct: 156 MHTMRKTSGLAPFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++IVILNDNKQVSLPTATLDGP  PVGALSSALS+LQ++   
Sbjct: 216 MTAGQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASLKF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGM+S SGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 276 RQLREAAKTITKQIGPQAHEVAAKVDEYARGMLSASGSTLFEELGLYYIGPVDGHNIEDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + ILE+VK     GPVLIH+VTEKG+GY  AE A DK HGVA+FDP TGKQFK+ + T +
Sbjct: 336 ITILEKVKALPAPGPVLIHIVTEKGKGYLPAEAADDKMHGVAQFDPKTGKQFKAKSPTLT 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTQYFAESLIKEAENDNKIVAIHAAMGGGTGLNYFQKQFPERCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 456 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  L   NKGIP+EVGKG
Sbjct: 516 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGAILSLNNKGIPIEVGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EGERVA+LGYG+ +Q CL A+ +L S+ +R+ VADARFCKPLD  LIRSLAK HE+
Sbjct: 576 RILREGERVAILGYGSIIQQCLGAADILNSHDIRVAVADARFCKPLDADLIRSLAKEHEI 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL+ + +LDG +K R ++LPDRYIDHGSP DQ+  AGL+  H
Sbjct: 636 LITVEEGSIGGFGSHVSHFLSLNSILDGPLKLRSMLLPDRYIDHGSPVDQIEAAGLSSRH 695

Query: 541 IAATVFNILGQTREALEI 558
           I++TV  +LG+ +EA+ +
Sbjct: 696 ISSTVLTLLGRPKEAMVV 713


>gi|356567757|ref|XP_003552082.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 714

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/556 (74%), Positives = 476/556 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N++++VIGDGA
Sbjct: 156 MHTIRKTSGLAGFPKRDESIHDAFGVGHSSTSISAGLGMAVARDLLGKNNSIISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAGQAYEAMNNAG+LDS+MIV+LNDNKQVSLPTATLDGP  PVGALSSALS++Q++   
Sbjct: 216 LTAGQAYEAMNNAGFLDSNMIVVLNDNKQVSLPTATLDGPASPVGALSSALSKIQASAEF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   H++AAKVDEYARG+ISGS  T FEELGLYYIGPVDGH ++DL
Sbjct: 276 RKLREAAKSITKQIGKQTHQVAAKVDEYARGIISGSACTFFEELGLYYIGPVDGHKIEDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK     GPVLIH VTEKG+GYP AEKA+DK HGV KFDP TG+QFK+ + T S
Sbjct: 336 VTIFEKVKAMPAPGPVLIHCVTEKGKGYPPAEKASDKMHGVVKFDPKTGEQFKAKSSTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE DK +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTQYFAESLIKEAENDKKIVAIHAAMGGGTGLNYFHKRFPERCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD+T+M
Sbjct: 456 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDITYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKG
Sbjct: 516 ACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGIGATLPLNNKGTPLEIGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG R+A+LGYG+ VQ C  AS +L+  G+ +TVADARFCKPLD  LIR LAK HE+
Sbjct: 576 RILVEGSRIAILGYGSVVQQCRQASEMLKELGVDVTVADARFCKPLDTGLIRLLAKEHEI 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFL+  G+LDG +KWR ++LPDRYI+HGSP  Q+  AGL+  H
Sbjct: 636 LITVEEGSIGGFGSHVSQFLSLSGILDGPLKWRAMMLPDRYIEHGSPQAQVEDAGLSSKH 695

Query: 541 IAATVFNILGQTREAL 556
           IAATV +++ + ++AL
Sbjct: 696 IAATVLSLMERPKQAL 711


>gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate synthase (DXS) [Narcissus
           pseudonarcissus]
          Length = 709

 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/558 (74%), Positives = 476/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N+V++VIGDG 
Sbjct: 151 MHTLRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGKSNHVISVIGDGV 210

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN GYLDS++IV+LNDNKQVSLPTATL+GP  PVGALS AL++LQ++   
Sbjct: 211 MTAGQAYEAMNNVGYLDSNLIVVLNDNKQVSLPTATLNGPATPVGALSGALAKLQASAKF 270

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  HE+AAKVDEYARGMIS SG++LFEELGLYYIGPVDGHNV+DL
Sbjct: 271 RQLREAAKCITKQIGGQAHEVAAKVDEYARGMISASGASLFEELGLYYIGPVDGHNVEDL 330

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAI ++VK   + GPVL+H+VTEKG+GYP AE AADK HGV KFDP TGKQFK+   T S
Sbjct: 331 VAIFKKVKAMPSPGPVLVHIVTEKGKGYPPAEAAADKMHGVVKFDPKTGKQFKTKFPTLS 390

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+L+ EAEVD+ +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 391 YTQYFAESLVKEAEVDEKIVAIHAAMGGGTGLNFFQKKFPDRCFDVGIAEQHAVTFAAGL 450

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFA+DRAGLVGADGPTHCG+FDVT+M
Sbjct: 451 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDVTYM 510

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNG+GV LP   KG PLE+GKG
Sbjct: 511 ACLPNMIVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNGVGVALPSDYKGTPLEIGKG 570

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG++VA+LGYG+ VQSCL A+  L   G+  TVAD RFCKPLD  LIR L   HE+
Sbjct: 571 RILMEGDKVAILGYGSIVQSCLKAAGSLRERGISATVADGRFCKPLDSELIRRLVNEHEI 630

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL+ +GLLDG +K R +VLPDRYIDHG+P DQ+ +AGL+  H
Sbjct: 631 LITVEEGSIGGFASHVSHFLSLNGLLDGHLKLRSMVLPDRYIDHGAPKDQIEEAGLSSKH 690

Query: 541 IAATVFNILGQTREALEI 558
           IA TV ++LG+  EA ++
Sbjct: 691 IAGTVLSLLGRPMEAFQL 708


>gi|357111282|ref|XP_003557443.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Brachypodium distachyon]
          Length = 713

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/558 (73%), Positives = 479/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISA LGMAV RDL+G+KN+V++VIGDGA
Sbjct: 155 MHTIRKTSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDLQGKKNHVISVIGDGA 214

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYLDS+MIV+LNDNKQVSLPTAT+DGP  PVGALS AL++LQS+   
Sbjct: 215 MTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATMDGPAKPVGALSKALTKLQSSTKF 274

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIGG  HE+AAKVDEYARGMIS +GS+LFEELGLYYIGPVDGH+++DL
Sbjct: 275 RKLREAAKTITKQIGGSTHEVAAKVDEYARGMISATGSSLFEELGLYYIGPVDGHSLEDL 334

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK+    GPVLIH+VTEKG+GYP AE AADK HGV KFDP TGKQFK+ + T S
Sbjct: 335 VTIFQKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPVTGKQFKTKSPTLS 394

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D+ VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAG+
Sbjct: 395 YTQYFAESLIREAEADEKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGM 454

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 455 AAEGMKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDVTYM 514

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATA AIDDRPSCFR+PRGNG+G  LP  NKGI +++GKG
Sbjct: 515 ACLPNMVVMAPADEAELMHMVATANAIDDRPSCFRFPRGNGVGAVLPANNKGIAVQIGKG 574

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+ G RVALLGYGT VQ+C+ A+ +L+ + + +TVADARFCKPLD  LIR LA  HE+
Sbjct: 575 RVLVGGNRVALLGYGTMVQACVKAAEMLKEHDVFVTVADARFCKPLDTQLIRDLAAEHEI 634

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT EEGSIGGFGSHV  +L   GLLDG +K R + LPDRYIDHG+  DQ+ +AGLTP H
Sbjct: 635 LITAEEGSIGGFGSHVAHYLGLSGLLDGHLKLRSMFLPDRYIDHGAAEDQMEEAGLTPRH 694

Query: 541 IAATVFNILGQTREALEI 558
           IAATV ++LG+  EAL++
Sbjct: 695 IAATVLSLLGRPLEALQL 712


>gi|326501314|dbj|BAJ98888.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 714

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/558 (74%), Positives = 475/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISA LGMAV RDL+G+KN+V++VIGDGA
Sbjct: 156 MHTIRKTSGLAGFPKRDESAHDAFGVGHSSTSISAALGMAVARDLQGKKNHVISVIGDGA 215

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+G+LDS+MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+   
Sbjct: 216 MTAGQAYEAMNNSGFLDSNMIVVLNDNKQVSLPTATLDGPSKPVGALSKALTKLQSSTKF 275

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK +TKQIGG  HE+AAKVDEYARGMIS SGSTLFEELGLYYIGPVDGH+++DL
Sbjct: 276 RRLREAAKTITKQIGGSTHEVAAKVDEYARGMISASGSTLFEELGLYYIGPVDGHSLEDL 335

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIH+VTEKG+GYP AE AADK HGV KFDP TGKQFK+ + T S
Sbjct: 336 VTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPTTGKQFKTKSPTLS 395

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D  VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 396 YTQYFAESLIREAEGDDKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 455

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDVT+M
Sbjct: 456 AAEGMKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVTYM 515

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATA AIDDRPSCFR+PRGNG+G  LP  N+G P+EVGKG
Sbjct: 516 ACLPNMVVMAPADEAELMHMVATANAIDDRPSCFRFPRGNGVGAVLPLNNRGTPIEVGKG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+ G RVAL+GYGT VQ+CL A+  L+ + L +TV DARFCKPLD  LIR LA  HE+
Sbjct: 576 RVLVRGNRVALVGYGTMVQACLKAAEALKEHDLSITVVDARFCKPLDTELIRELAAEHEI 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT EEGSIGGFGSHV  +L+ +GLLDG +K R + LPDRYIDHG+  DQ+  AGLTP H
Sbjct: 636 LITAEEGSIGGFGSHVAHYLSLNGLLDGPLKLRSMFLPDRYIDHGAADDQMEAAGLTPRH 695

Query: 541 IAATVFNILGQTREALEI 558
           IAATV +++G+  EAL +
Sbjct: 696 IAATVLSLVGRPLEALHL 713


>gi|374639395|gb|AEZ55686.1| putative 1-deoxy-D-xylulose 5-phosphate synthase of [Salvia
           miltiorrhiza]
          Length = 713

 Score =  872 bits (2253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/558 (74%), Positives = 475/558 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+ N+VV+VIGDGA
Sbjct: 155 MHTIRQTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKDNSVVSVIGDGA 214

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++I++LNDNKQVSLPTATLDGP  PVGALSSAL++LQ++   
Sbjct: 215 MTAGQAYEAMNNAGFLDSNLIIVLNDNKQVSLPTATLDGPATPVGALSSALTKLQASPKF 274

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARGM+S SGST FEELGLYYIGPVDGHN+DDL
Sbjct: 275 RQLREAAKSITKQIGPQAHEVAAKVDEYARGMLSASGSTFFEELGLYYIGPVDGHNIDDL 334

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK+    GPVLIH+VTEKG+GYP AE AAD+ HGV KFDP TGKQ K+ + T S
Sbjct: 335 VTIFQKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDPCTGKQNKAKSSTLS 394

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 395 YTQYFAESLIREAEADSKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 454

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFC IYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT+M
Sbjct: 455 ATEGLKPFCTIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTYM 514

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFR+PRGNG+G  LP  NKG P+E+GKG
Sbjct: 515 ACLPNMVVMAPSDEAELIHMVATAAAIDDRPSCFRFPRGNGVGAPLPYNNKGTPIEIGKG 574

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI++EG RVA+LGYG AVQ C+ A+ +L+S  +  T+ DARFCKPLD  LI  LAK HE+
Sbjct: 575 RIVMEGSRVAILGYGAAVQQCIGAAEMLKSYDIAPTLVDARFCKPLDTHLITRLAKEHEI 634

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL+ +GLLDG +K R ++LPDRYI+HG+P DQ+ +AGLT  H
Sbjct: 635 LITVEEGSIGGFGSHVSHFLSLNGLLDGHLKLRSMMLPDRYIEHGAPQDQIEEAGLTSRH 694

Query: 541 IAATVFNILGQTREALEI 558
           I  TV +++G+  EAL++
Sbjct: 695 ICGTVLSLVGRPMEALKL 712


>gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphate synthase [Morinda citrifolia]
          Length = 722

 Score =  870 bits (2247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/558 (73%), Positives = 474/558 (84%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT G++GF KR ES YD FG GHSSTSISAGLGMAVGRDL G+ NNV++VIGDGA
Sbjct: 164 MQTIRQTYGIAGFPKRDESVYDAFGAGHSSTSISAGLGMAVGRDLLGKNNNVISVIGDGA 223

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LD+++IVILNDNKQVSLPT TLDGP  PVGALSSAL++LQ++   
Sbjct: 224 MTAGQAYEAMNNAGFLDANLIVILNDNKQVSLPTGTLDGPATPVGALSSALTKLQASPKF 283

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   HE+AAKVDEYARG+IS SGST FEELGLYYIGPVDGHN++DL
Sbjct: 284 RQLREAAKSITKQIGPQAHEVAAKVDEYARGLISASGSTFFEELGLYYIGPVDGHNIEDL 343

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + I ++VK     GPVLIH+VTEKG+GYP AE AAD+ HGV KFD A+GKQFKS + T S
Sbjct: 344 ITIFDKVKTMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFDVASGKQFKSKSPTLS 403

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALI EAE+D  +VAIHAAMGGGTGLN F + FP RCFDVGIAEQHAVTFAAGL
Sbjct: 404 YTQYFAEALIKEAEIDNKIVAIHAAMGGGTGLNYFQKIFPERCFDVGIAEQHAVTFAAGL 463

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +M
Sbjct: 464 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYM 523

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACL NM+VMAP+DEAEL HMVATAA IDDRP CFR+PRGNGIG +LPP NKG  + +GKG
Sbjct: 524 ACLSNMIVMAPADEAELMHMVATAATIDDRPCCFRFPRGNGIGAKLPPDNKGNLIGIGKG 583

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA++GYG  VQ CL A+ +L+ + ++ T+ADARFCKPLD  LI+ LAK HE+
Sbjct: 584 RILTEGSRVAIIGYGAIVQQCLGAAEMLKLHNIKPTIADARFCKPLDGELIKRLAKEHEI 643

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL+  GLLDG +K R +VLPDRYIDHGSPADQ+ QAGL+  H
Sbjct: 644 LITVEEGSIGGFGSHVSHFLSLSGLLDGPIKLRSMVLPDRYIDHGSPADQIEQAGLSSRH 703

Query: 541 IAATVFNILGQTREALEI 558
           I ATV ++LG+ +EAL++
Sbjct: 704 ICATVLSLLGKPKEALQL 721


>gi|414883878|tpg|DAA59892.1| TPA: 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 727

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/559 (75%), Positives = 480/559 (85%), Gaps = 1/559 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL GRKN+V++VIGDGA
Sbjct: 168 MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAALGMAVARDLLGRKNHVISVIGDGA 227

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYLD++MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+   
Sbjct: 228 MTAGQAYEAMNNSGYLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKF 287

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK VTKQIGGP HE+AAKVDEYARGMIS SGS+LFEELGLYYIGPVDGH V+DL
Sbjct: 288 RRLREAAKSVTKQIGGPTHEVAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDL 347

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIH+VTEKG+GYP AE AAD+ HGV KF+PATG+Q KS + T S
Sbjct: 348 VTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLS 407

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D+ VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 408 YTQYFAESLIREAESDEKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 467

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDV +M
Sbjct: 468 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYM 527

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PRGNG+G  LPPGNKG+ LEVG+G
Sbjct: 528 ACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRG 587

Query: 421 RILIEGE-RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           R+L+ G  RVALLGYG  VQ+CL A+  L+ + + +TVADARFCKPLD ALIR LA  HE
Sbjct: 588 RVLVGGGTRVALLGYGAMVQACLKAAEALKEHDVYVTVADARFCKPLDTALIRELAAEHE 647

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT EEGSIGGFGSHV  +L+  GLLDG +K R + LPDRYIDHG+P DQ+ +AGLTP 
Sbjct: 648 VLITAEEGSIGGFGSHVAHYLSLTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPR 707

Query: 540 HIAATVFNILGQTREALEI 558
           HIAATV ++LG+  EA+++
Sbjct: 708 HIAATVLSLLGRPLEAMQL 726


>gi|359485061|ref|XP_002271782.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 815

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/561 (73%), Positives = 472/561 (84%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES YD FG GHSSTSISAGLGMA GRDL G+ NNV++VIGDGA
Sbjct: 255 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAAGRDLLGKNNNVISVIGDGA 314

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDN QVSLPTAT+DGP PPVGALS AL+ LQS+R  
Sbjct: 315 MTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKF 374

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG TK +GG  HE+AAKVDEY RG++ GS + LFEELGL YIGPVDGHNV+DL
Sbjct: 375 RQLREAAKGFTKHVGGQAHEIAAKVDEYMRGIVGGSHACLFEELGLSYIGPVDGHNVEDL 434

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL +V+     GPVL+HV+TEKG+GY  AE AADK HGV KFD  +GKQ K+ ++T S
Sbjct: 435 VHILTKVRVMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTLS 494

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T YFAE+LIAEAE D+++VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 495 HTQYFAESLIAEAERDENIVAIHAAMGGGTGLNLFQKRFPDRCFDVGIAEQHAVTFAAGL 554

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
             EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 555 DTEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFM 614

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS E+EL HMVATAAAIDDRPSCFRYP GNGIG  LP  NKG PLE+GKG
Sbjct: 615 ACLPNMVVMAPSCESELMHMVATAAAIDDRPSCFRYPGGNGIGSILPQNNKGTPLEIGKG 674

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQ+CLAA  LL+  G+  TVADARFCKPLD  LIR LA+ HEV
Sbjct: 675 RVLKEGSRVAILGYGTIVQNCLAAGKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEV 734

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL  +GLLDG +KWRP++LPDRYI+HGS  +Q  +AGL+  H
Sbjct: 735 LITVEEGSIGGFSSHVSHFLGLNGLLDGKLKWRPMMLPDRYINHGSQTEQFEEAGLSSRH 794

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATV +++G+ +++L ++  
Sbjct: 795 IAATVLSVMGENKDSLHLLKL 815


>gi|56785668|gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate synthase [Antirrhinum majus]
          Length = 733

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/561 (72%), Positives = 474/561 (84%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMR+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G  N+V++VIGDGA
Sbjct: 173 MHTMRKTFGLAGFPKREESVHDAFGAGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGA 232

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDNKQVSLPTAT+DGP PPVGAL+ AL+RLQ++R  
Sbjct: 233 MTAGQAYEAMNNAGYLDSNLIIILNDNKQVSLPTATVDGPAPPVGALTKALTRLQTSRKF 292

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LREVAK +TKQIG   HE+AAKVD + RG+    G+ LFEELG+YYIGPVDGH+++DL
Sbjct: 293 RQLREVAKELTKQIGTEAHEVAAKVDSFVRGVAGSPGACLFEELGIYYIGPVDGHSIEDL 352

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I +++K     GPV+IH++TEKG+GYP AE AADK HGV KFDP TG+Q KS + T S
Sbjct: 353 VFIFKKIKEMPAPGPVMIHIITEKGKGYPPAEVAADKMHGVVKFDPRTGQQKKSKSETLS 412

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D  VVAIHAAMGGGTGLN+F +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 413 YTQYFAESLIAEAEQDDKVVAIHAAMGGGTGLNIFQKRFPGRTFDVGIAEQHAVTFAAGL 472

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQV HDVDLQKLPVRF MDRAGLVGADGPTHCG+FD T+M
Sbjct: 473 ATEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFIMDRAGLVGADGPTHCGAFDTTYM 532

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HM+ATAA IDDRPSC RYPRGNGIG  LPP NKG P+E+GKG
Sbjct: 533 ACLPNMVVMAPSDEAELMHMIATAAIIDDRPSCLRYPRGNGIGAVLPPNNKGTPMEIGKG 592

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA+LG+GT +Q+CLAA+ LL+ + + +TVADARFCKPLD  LIR L K HEV
Sbjct: 593 RILREGSRVAILGFGTIIQNCLAAADLLQEHRVSITVADARFCKPLDGDLIRQLVKEHEV 652

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGF SHV  FL  +GLLDG +KWR +VLPDRYIDHG+ +DQ+ +AGL+P H
Sbjct: 653 LITIEEGSIGGFSSHVSHFLCLNGLLDGNLKWRAMVLPDRYIDHGAQSDQIEEAGLSPRH 712

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATV +++G+ +++L +M  
Sbjct: 713 IAATVLSLIGEGKDSLHLMDL 733


>gi|147803271|emb|CAN71054.1| hypothetical protein VITISV_003721 [Vitis vinifera]
          Length = 1638

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/551 (74%), Positives = 470/551 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES YD FG GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGA
Sbjct: 175 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAVGRDLLGKNNHVISVIGDGA 234

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDN QVSLPTAT+DGP PPVGALS AL+ LQS+R  
Sbjct: 235 MTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKF 294

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG TKQ+GG  HE+AAKVDEY RGM+ GS + LFEELGLYYIGPVDGHNV+DL
Sbjct: 295 RQLREAAKGFTKQVGGQAHEIAAKVDEYMRGMVGGSNACLFEELGLYYIGPVDGHNVEDL 354

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL++V+     GPVL+HV+TEKG+GY  AE AADK HGV KFD  +GKQ K+ ++T+S
Sbjct: 355 VHILKKVRAMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTRS 414

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D++++AIHAAMGGGTGLNLF + FP RCFDVGIAEQHAVTFAAGL
Sbjct: 415 YTQYFAESLIAEAERDENIIAIHAAMGGGTGLNLFQKHFPDRCFDVGIAEQHAVTFAAGL 474

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFM
Sbjct: 475 ATEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAVDRAGLVGADGPTHCGAFDTTFM 534

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS E+EL HMVATAAAIDDRPSCFRYPRGNGIG  LP  NKG PLE+GKG
Sbjct: 535 ACLPNMVVMAPSCESELMHMVATAAAIDDRPSCFRYPRGNGIGSILPQNNKGTPLEIGKG 594

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQ+CLAAS LL+  G+  TVADARFCKPLD  LIR LA+ HEV
Sbjct: 595 RVLKEGSRVAILGYGTVVQNCLAASKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEV 654

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL  +GLLDG +KWRP++LPDRYI+HGS  +Q+ +AGL+  H
Sbjct: 655 LITVEEGSIGGFSSHVSHFLGLNGLLDGKLKWRPMMLPDRYINHGSQTEQVEEAGLSSRH 714

Query: 541 IAATVFNILGQ 551
           IAAT   +  Q
Sbjct: 715 IAATCCRLAYQ 725


>gi|297735368|emb|CBI17808.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/562 (73%), Positives = 472/562 (83%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL  + N+V+AVIGDGA
Sbjct: 247 MHTIRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGA 306

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDN QVSLPTAT DGP PPVGALS AL RLQS+R  
Sbjct: 307 MTAGQAYEAMNNAGYLDSNLIIILNDNNQVSLPTATADGPAPPVGALSKALKRLQSSRKF 366

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++L + AK +T+++GG  HE+AAKVD Y RGMI+G G+  FEELGL+YIGPVDGHN+++L
Sbjct: 367 QQLHQTAKAITERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLHYIGPVDGHNMEEL 426

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+ VK     G VLIH+VTEKG+GY  AE A DK HGV KFDP +GKQ KS + T S
Sbjct: 427 VHILKVVKAIPGQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLS 486

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D  +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 487 YTQYFAESLIAEAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGL 546

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QRA+DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 547 ATEGLKPFCAIYSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFM 606

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS E EL +MVATAAAIDDRPSCFRYPRGNGIG  +PP NKG PLEVGKG
Sbjct: 607 ACLPNMVVMAPSCERELMNMVATAAAIDDRPSCFRYPRGNGIGSIIPPFNKGTPLEVGKG 666

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQSC+AAS LL+  G+  TV DARFCKPLD  LIR LA+ HEV
Sbjct: 667 RVLEEGTRVAILGYGTIVQSCVAASHLLQRFGISATVVDARFCKPLDGDLIRQLAREHEV 726

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FLA +GLLDGT+KWR ++LPDRYIDHGS  +Q+ +AGLT  H
Sbjct: 727 LLTVEEGSIGGFGSHVSHFLALNGLLDGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKH 786

Query: 541 IAATVFNILGQTREALEIMSFK 562
           IAATV  ++G+ ++AL  +  K
Sbjct: 787 IAATVLALIGENKDALHQLKLK 808


>gi|449532138|ref|XP_004173040.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 694

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/542 (76%), Positives = 469/542 (86%), Gaps = 1/542 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+KN+V++VIGDGA
Sbjct: 153 MHTLRQTSGLAGFPKRDESIHDAFGAGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLD++MIVILNDNKQVSLPTATLDGP  PVGALSSAL++LQ++   
Sbjct: 213 MTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSALTKLQASTQF 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQIG   H +AAKVDEYARGMISGSGST FEELGLYYIGPVDGHNV DL
Sbjct: 273 RKLREAAKTITKQIGKQTHGVAAKVDEYARGMISGSGSTFFEELGLYYIGPVDGHNVGDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE+VK+    GPVLIH++TEKG+GYP AE AADK HGV KFDP TGKQFK+ + T S
Sbjct: 333 VTILEKVKSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGVVKFDPKTGKQFKTKSPTLS 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE+D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFAESLIKEAELDDKIVAIHAAMGGGTGLNYFQKKFPQRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCAIYSSF+QR +DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+T+M
Sbjct: 453 ATEGIKPFCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAP+DEAEL HMVATAA IDDRPSCFR+PRGNGIGV +PP  KG P+E+GKG
Sbjct: 513 ACLPNMIVMAPADEAELIHMVATAAEIDDRPSCFRFPRGNGIGVVVPPNFKGTPIEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI++EG RVA+LGYG+ VQ C+ AS LL++ G+  TVADARFCKPLD  LIR LAK HE+
Sbjct: 573 RIVMEGTRVAILGYGSIVQQCVEASELLKTRGITPTVADARFCKPLDTQLIRQLAKEHEI 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDG-TVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LITVEEGSIGGFGSHV  FL+  G+LD   +K R +VLPDRYIDHGSP DQ+ +AGL+  
Sbjct: 633 LITVEEGSIGGFGSHVSYFLSVTGILDQHHLKLRSMVLPDRYIDHGSPGDQMEEAGLSSE 692

Query: 540 HI 541
           HI
Sbjct: 693 HI 694


>gi|225446107|ref|XP_002270336.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 731

 Score =  866 bits (2238), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/562 (73%), Positives = 472/562 (83%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL  + N+V+AVIGDGA
Sbjct: 170 MHTIRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGA 229

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDN QVSLPTAT DGP PPVGALS AL RLQS+R  
Sbjct: 230 MTAGQAYEAMNNAGYLDSNLIIILNDNNQVSLPTATADGPAPPVGALSKALKRLQSSRKF 289

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++L + AK +T+++GG  HE+AAKVD Y RGMI+G G+  FEELGL+YIGPVDGHN+++L
Sbjct: 290 QQLHQTAKAITERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLHYIGPVDGHNMEEL 349

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+ VK     G VLIH+VTEKG+GY  AE A DK HGV KFDP +GKQ KS + T S
Sbjct: 350 VHILKVVKAIPGQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLS 409

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D  +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 410 YTQYFAESLIAEAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGL 469

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QRA+DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 470 ATEGLKPFCAIYSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFM 529

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS E EL +MVATAAAIDDRPSCFRYPRGNGIG  +PP NKG PLEVGKG
Sbjct: 530 ACLPNMVVMAPSCERELMNMVATAAAIDDRPSCFRYPRGNGIGSIIPPFNKGTPLEVGKG 589

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQSC+AAS LL+  G+  TV DARFCKPLD  LIR LA+ HEV
Sbjct: 590 RVLEEGTRVAILGYGTIVQSCVAASHLLQRFGISATVVDARFCKPLDGDLIRQLAREHEV 649

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FLA +GLLDGT+KWR ++LPDRYIDHGS  +Q+ +AGLT  H
Sbjct: 650 LLTVEEGSIGGFGSHVSHFLALNGLLDGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKH 709

Query: 541 IAATVFNILGQTREALEIMSFK 562
           IAATV  ++G+ ++AL  +  K
Sbjct: 710 IAATVLALIGENKDALHQLKLK 731


>gi|145652154|gb|ABP88135.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 705

 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/559 (75%), Positives = 480/559 (85%), Gaps = 1/559 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL GRKN+V++VIGDGA
Sbjct: 146 MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAALGMAVARDLLGRKNHVISVIGDGA 205

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYLD++MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+   
Sbjct: 206 MTAGQAYEAMNNSGYLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKF 265

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK VTKQIGGP HE+AAKVDEYARGMIS SGS+LFEELGLYYIGPVDGH V+DL
Sbjct: 266 RRLREAAKSVTKQIGGPTHEVAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDL 325

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIH+VTEKG+GYP AE AAD+ HGV KF+PATG+Q KS + T S
Sbjct: 326 VTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLS 385

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LI EAE D+ VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 386 YTQYFAESLIREAESDEKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGL 445

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDV +M
Sbjct: 446 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYM 505

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PRGNG+G  LPPGNKG+ LEVG+G
Sbjct: 506 ACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRG 565

Query: 421 RILIEGE-RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           R+L+ G  RVALLGYG  VQ+CL A+  L+ + + +TVADARFCKPLD ALIR LA  HE
Sbjct: 566 RVLVGGGTRVALLGYGAMVQACLKAAEALKEHDVYVTVADARFCKPLDTALIRELAAEHE 625

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT EEGSIGGFGSHV  +L+  GLLDG +K R + LPDRYIDHG+P DQ+ +AGLTP 
Sbjct: 626 VLITAEEGSIGGFGSHVAHYLSLTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPR 685

Query: 540 HIAATVFNILGQTREALEI 558
           HIAATV ++LG+  EA+++
Sbjct: 686 HIAATVLSLLGRPLEAMQL 704


>gi|297735323|emb|CBI17763.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score =  865 bits (2236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/561 (73%), Positives = 472/561 (84%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES YD FG GHSSTSISAGLGMA GRDL G+ NNV++VIGDGA
Sbjct: 130 MHTIRQTCGLAGFPKRDESIYDAFGAGHSSTSISAGLGMAAGRDLLGKNNNVISVIGDGA 189

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I+ILNDN QVSLPTAT+DGP PPVGALS AL+ LQS+R  
Sbjct: 190 MTAGQAYEAMNNAGYLDSNLIIILNDNGQVSLPTATVDGPAPPVGALSKALTNLQSSRKF 249

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG TK +GG  HE+AAKVDEY RG++ GS + LFEELGL YIGPVDGHNV+DL
Sbjct: 250 RQLREAAKGFTKHVGGQAHEIAAKVDEYMRGIVGGSHACLFEELGLSYIGPVDGHNVEDL 309

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL +V+     GPVL+HV+TEKG+GY  AE AADK HGV KFD  +GKQ K+ ++T S
Sbjct: 310 VHILTKVRVMPAPGPVLVHVITEKGKGYAPAEVAADKMHGVVKFDAMSGKQLKTKSKTLS 369

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T YFAE+LIAEAE D+++VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 370 HTQYFAESLIAEAERDENIVAIHAAMGGGTGLNLFQKRFPDRCFDVGIAEQHAVTFAAGL 429

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
             EGLKPFCAIYSSF+QR +DQV HDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 430 DTEGLKPFCAIYSSFLQRGFDQVAHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFM 489

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS E+EL HMVATAAAIDDRPSCFRYP GNGIG  LP  NKG PLE+GKG
Sbjct: 490 ACLPNMVVMAPSCESELMHMVATAAAIDDRPSCFRYPGGNGIGSILPQNNKGTPLEIGKG 549

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQ+CLAA  LL+  G+  TVADARFCKPLD  LIR LA+ HEV
Sbjct: 550 RVLKEGSRVAILGYGTIVQNCLAAGKLLQVLGVSTTVADARFCKPLDGDLIRQLAQEHEV 609

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FL  +GLLDG +KWRP++LPDRYI+HGS  +Q  +AGL+  H
Sbjct: 610 LITVEEGSIGGFSSHVSHFLGLNGLLDGKLKWRPMMLPDRYINHGSQTEQFEEAGLSSRH 669

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATV +++G+ +++L ++  
Sbjct: 670 IAATVLSVMGENKDSLHLLKL 690


>gi|21322715|emb|CAD22531.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Medicago truncatula]
 gi|154815950|emb|CAN89180.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
           truncatula]
          Length = 711

 Score =  864 bits (2233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/556 (73%), Positives = 473/556 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL G+KN+V++VIGDGA
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKKNSVISVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG++DS++IVILNDNKQVSLPTATLDGP  PVGALSS LS++Q++R  
Sbjct: 213 MTAGQAYEAMNNAGFIDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLSKIQASRKF 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE  K +TKQIGG  H +A+KVD+YAR  ISGSGS+LFEELG+YYIGP+DGHN++DL
Sbjct: 273 RKLREATKNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK     GPVLIH+VTEKG+GYP A  AAD+ HGV KFDP TG QFK    T +
Sbjct: 333 VNIFEKVKAMPAPGPVLIHIVTEKGKGYPPALAAADRMHGVVKFDPKTGHQFKPKPSTLA 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA++LI EAE+D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+TFM
Sbjct: 453 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAEL +MVATAAAIDDRPSCFR+PRGNGIG  LP  NKG PLE+GKG
Sbjct: 513 ACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPRGNGIGANLPLNNKGTPLEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG  VQ C+ A+ +L + G+ +TVADARFCKPLD  LIR LA+ HE+
Sbjct: 573 RILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVADARFCKPLDTDLIRLLAREHEI 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFL+  GLLDG +K R ++LPDRYIDHG+P DQ+ +AGL+  H
Sbjct: 633 LITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKH 692

Query: 541 IAATVFNILGQTREAL 556
           I ATV ++L   +EAL
Sbjct: 693 ILATVLSLLDMPKEAL 708


>gi|154815951|emb|CAN89181.1| 1-Deoxy-D-xylulose 5-phosphate synthase 2 precursor [Medicago
           truncatula]
          Length = 710

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/556 (73%), Positives = 476/556 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMA+ RDL G+KN+V++VIGDGA
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAIARDLLGKKNSVISVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEA+NNAG+LDS++IVILNDNKQVSLPTATLDGP  PVGALSS LS++Q++R  
Sbjct: 213 MTAGQAYEALNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLSKIQASRKF 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE  K +TKQIGG  H +A+KVD+YAR  ISGSGS+LFEELG+YYIGP+DGHN++DL
Sbjct: 273 RKLREATKNITKQIGGQTHLVASKVDKYARDFISGSGSSLFEELGMYYIGPMDGHNIEDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK T  +GPVLIH+VTEKG+GYP A  AAD+ HGV KFDP TG QFK    T +
Sbjct: 333 VNIFEKVKATPASGPVLIHIVTEKGKGYPPAVAAADRMHGVVKFDPKTGHQFKPKPSTLA 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA++LI EAE+D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD+TFM
Sbjct: 453 ATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITFM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAEL +MVATAAAIDDRPSCFR+PRGNGIG +LP  NKG PLE+GKG
Sbjct: 513 ACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPRGNGIGADLPLHNKGTPLEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EG RVA+LGYG  VQ C+ A+ +L + G+ +TV+DARFCKPLD  LIR LA+ HE+
Sbjct: 573 RILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVSDARFCKPLDTDLIRLLAREHEI 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV QFL+  GLLDG +K R ++LPDRYIDHG+P DQ+ +AGL+  H
Sbjct: 633 LITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLPDRYIDHGAPNDQIDEAGLSSKH 692

Query: 541 IAATVFNILGQTREAL 556
           I ATV ++L   +EAL
Sbjct: 693 ILATVLSLLEMPKEAL 708


>gi|3114573|gb|AAC33513.1| 1-deoxyxylulose-5-phosphate synthase [Mentha x piperita]
          Length = 724

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/560 (70%), Positives = 480/560 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL  + N+V++VIGDGA
Sbjct: 163 MHTIRQTFGLAGFPKRDESAHDAFGAGHSSTSISAGLGMAVARDLLQKNNHVISVIGDGA 222

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEA+NNAG+LDS++I++LNDNKQVSLPTAT+DGP PPVGALS AL++LQ++R  
Sbjct: 223 MTAGQAYEALNNAGFLDSNLIIVLNDNKQVSLPTATVDGPAPPVGALSKALTKLQASRKF 282

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK +TKQ+G P HE+A+K+ +Y +GM+   G++LFEELG+YYIGPVDGHNV+DL
Sbjct: 283 RQLREAAKSMTKQMGAPAHEIASKLTQYVKGMMGKPGASLFEELGIYYIGPVDGHNVEDL 342

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH++TEKG+GYP AE AADK HGV KFD  TGKQ K+  +T+S
Sbjct: 343 VYIFKKVKEMPAPGPVLIHIITEKGKGYPPAEIAADKMHGVVKFDAKTGKQMKTKNKTKS 402

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+L+AEAE D  +VAIHAAMGGGTGLN+F ++FP RCFDVGIAEQHAVTFAAG+
Sbjct: 403 YTQYFAESLVAEAEHDDKIVAIHAAMGGGTGLNIFQKQFPDRCFDVGIAEQHAVTFAAGM 462

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRF MDRAG+VGADGPTHCG+FD T+M
Sbjct: 463 AAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFMMDRAGVVGADGPTHCGAFDTTYM 522

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL +M+ATAA IDDRPSC RYPRGNGIGV LP  NKG PLE+GKG
Sbjct: 523 ACLPNMVVMAPSDEAELMNMIATAAIIDDRPSCVRYPRGNGIGVALPSNNKGTPLEIGKG 582

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VA+LG+GT VQ+C+AA+ LLE +G+ +TVADARFCKPLD  LI+ L + HEV
Sbjct: 583 RILKEGSKVAILGFGTIVQNCMAAANLLEQHGISVTVADARFCKPLDGDLIKKLVQEHEV 642

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF +H+  FL+ +GLLDG +KWRP+VLPDRYIDHG+ +DQ+ +AGL+P H
Sbjct: 643 LITVEEGSIGGFSAHISHFLSLNGLLDGNLKWRPMVLPDRYIDHGAQSDQIEEAGLSPKH 702

Query: 541 IAATVFNILGQTREALEIMS 560
           IA TV +++G  +++L +++
Sbjct: 703 IAGTVVSLIGGGKDSLHLIN 722


>gi|449500270|ref|XP_004161053.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 724

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/561 (72%), Positives = 476/561 (84%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAVGRD+ G+ N+VV+VIGDGA
Sbjct: 164 MHTIRQTFGLAGFPKREESVHDAFGVGHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGA 223

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G AYEA+NNAGYLDS++IVILNDN+QVSLPTAT+DGP  PVGAL+ AL++LQ+++ L
Sbjct: 224 MTGGMAYEALNNAGYLDSNLIVILNDNRQVSLPTATIDGPATPVGALNKALTKLQASKKL 283

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK V+KQ+GG  H +AAKV+   RGM+ G+G++LFEELG+YYIGPVDGHNV+DL
Sbjct: 284 RQLREAAKAVSKQMGGETHGIAAKVEHCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDL 343

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL++VK    +GPVLIHV+TEKG+GYP AE AADK HGV  FDP +GKQ K    T S
Sbjct: 344 VYILKQVKAMPASGPVLIHVITEKGKGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLS 403

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA++LIAEAE D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 404 YTQYFADSLIAEAERDDKIVAIHAAMGGGTGLNYFQKQFPNRCFDVGIAEQHAVTFAAGL 463

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QRAYDQV HDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFM
Sbjct: 464 ATEGLKPFCAIYSSFLQRAYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 523

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS+EAEL +MVATAAAIDDRPSCFRYPRGNGIG  LP  NKG PLEVGKG
Sbjct: 524 ACLPNMVVMAPSNEAELMNMVATAAAIDDRPSCFRYPRGNGIGCVLPLNNKGTPLEVGKG 583

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA+LGYGT VQSCLAA+ +L+  G+++TVADARFCKPLD  L++ LA+ HE+
Sbjct: 584 RILREGNRVAILGYGTIVQSCLAAANVLQEYGIQITVADARFCKPLDGELVKQLARQHEI 643

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGF SHV  FL  +GLLDG +KWR LVLPDRYIDHGS  DQ  +AGL+   
Sbjct: 644 LLTVEEGSIGGFSSHVSHFLGLNGLLDGNLKWRALVLPDRYIDHGSQKDQTQEAGLSWKD 703

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATV +++G+ ++  ++++ 
Sbjct: 704 IAATVLSLIGKGKDCFQLVNL 724


>gi|449457233|ref|XP_004146353.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 721

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/561 (72%), Positives = 476/561 (84%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAVGRD+ G+ N+VV+VIGDGA
Sbjct: 161 MHTIRQTFGLAGFPKREESVHDAFGVGHSSTSISAGLGMAVGRDILGKNNHVVSVIGDGA 220

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G AYEA+NNAGYLDS++IVILNDN+QVSLPTAT+DGP  PVGAL+ AL++LQ+++ L
Sbjct: 221 MTGGMAYEALNNAGYLDSNLIVILNDNRQVSLPTATIDGPATPVGALNKALTKLQASKKL 280

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK V+KQ+GG  H +AAKV+   RGM+ G+G++LFEELG+YYIGPVDGHNV+DL
Sbjct: 281 RQLREAAKAVSKQMGGETHGIAAKVEHCVRGMVGGTGASLFEELGIYYIGPVDGHNVEDL 340

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL++VK    +GPVLIHV+TEKG+GYP AE AADK HGV  FDP +GKQ K    T S
Sbjct: 341 VYILKQVKAMPASGPVLIHVITEKGKGYPPAEIAADKMHGVVNFDPKSGKQMKKKTETLS 400

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA++LIAEAE D  +VAIHAAMGGGTGLN F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 401 YTQYFADSLIAEAERDDKIVAIHAAMGGGTGLNYFQKQFPNRCFDVGIAEQHAVTFAAGL 460

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QRAYDQV HDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFM
Sbjct: 461 ATEGLKPFCAIYSSFLQRAYDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFM 520

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS+EAEL +MVATAAAIDDRPSCFRYPRGNGIG  LP  NKG PLEVGKG
Sbjct: 521 ACLPNMVVMAPSNEAELMNMVATAAAIDDRPSCFRYPRGNGIGCVLPLNNKGTPLEVGKG 580

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA+LGYGT VQSCLAA+ +L+  G+++TVADARFCKPLD  L++ LA+ HE+
Sbjct: 581 RILREGNRVAILGYGTIVQSCLAAANVLQEYGIQITVADARFCKPLDGELVKQLARQHEI 640

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGF SHV  FL  +GLLDG +KWR LVLPDRYIDHGS  DQ  +AGL+   
Sbjct: 641 LLTVEEGSIGGFSSHVSHFLGLNGLLDGNLKWRALVLPDRYIDHGSQKDQTQEAGLSWKD 700

Query: 541 IAATVFNILGQTREALEIMSF 561
           IAATV +++G+ ++  ++++ 
Sbjct: 701 IAATVLSLIGKGKDCFQLVNL 721


>gi|356564868|ref|XP_003550669.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 728

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/562 (71%), Positives = 469/562 (83%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL G+ N+V++VIGDGA
Sbjct: 166 MHTIRQTGGLAGFPKRDESLHDAFGVGHSSTSISASLGMAVARDLIGKDNHVISVIGDGA 225

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT GQAYEAMNNAG+LD+++I+ILNDN+QVSLPTAT+DGP PPVGALS AL+RL ++   
Sbjct: 226 MTGGQAYEAMNNAGFLDTNLIIILNDNEQVSLPTATIDGPAPPVGALSRALARLNTSSKF 285

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            +LR++AKG+TKQIG   +E  +K+D Y RGM+ G+G+ LFEELGL+YIGPVDGH+++DL
Sbjct: 286 HQLRDLAKGITKQIGSRAYEFTSKLDSYLRGMVGGAGACLFEELGLFYIGPVDGHDIEDL 345

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+ VK   T GPVLIHV+TEKG+GY  AE A DK HGV KFDP +GKQ KS A T+S
Sbjct: 346 VHILKSVKGMPTLGPVLIHVITEKGKGYHPAEVAPDKMHGVVKFDPKSGKQLKSKASTRS 405

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+L AEAEVD+ +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 406 YTQYFAESLTAEAEVDEKIVAIHAAMGGGTGLNLFQKRFPERCFDVGIAEQHAVTFAAGL 465

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQV HDVDLQKLPVRFA+DRAGLVGADGPTHCG+FD TFM
Sbjct: 466 AAEGLKPFCAIYSSFLQRGYDQVAHDVDLQKLPVRFALDRAGLVGADGPTHCGAFDTTFM 525

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDE EL HM+ATAAAIDDRPSCFRYPRGNGIG  LPP NKG PLEVGKG
Sbjct: 526 ACLPNMVVMAPSDETELMHMIATAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPLEVGKG 585

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVAL+GYGT VQSC+ A+ +LE++G+  TV DARFCKPLD  L+R LA+ HE+
Sbjct: 586 RVLKEGSRVALVGYGTMVQSCMEAAKVLEAHGISTTVVDARFCKPLDGDLMRRLAREHEI 645

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV  FL  +GLLDG +KWR L LPDRYI+HGS  DQ+  AGL+ +H
Sbjct: 646 LITVEEGSIGGFGSHVSHFLGLNGLLDGNLKWRALTLPDRYINHGSQTDQIQMAGLSSNH 705

Query: 541 IAATVFNILGQTREALEIMSFK 562
           IA T  ++     ++  ++S +
Sbjct: 706 IAVTALSLTNVHWDSRLLLSLQ 727


>gi|9971824|gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Tagetes erecta]
          Length = 725

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/560 (71%), Positives = 472/560 (84%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+ N+V+AVIGDGA
Sbjct: 165 MRTIRQTFGLAGFPKRDESNHDAFGAGHSSTSISAGLGMAVGRDLLGKNNHVIAVIGDGA 224

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++I++LNDN+QVSLPTAT+DGP PPVGALS +L+RLQ+++  
Sbjct: 225 MTAGQAYEAMNNAGYLDSNLIIVLNDNRQVSLPTATIDGPAPPVGALSRSLTRLQTSQKF 284

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AK VTKQ+G   HE+AAK+D   +GM+ G G+++FEELGLYY+GPVDGHN++DL
Sbjct: 285 RQLREAAKEVTKQLGDKTHEVAAKMDSLVKGMVGGQGASMFEELGLYYVGPVDGHNLEDL 344

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V + +++K+    GPVL+H+VTEKG+GYP AE AADK HGV KFD  TGKQ K+  +T S
Sbjct: 345 VYVFDKIKSMTAPGPVLVHIVTEKGKGYPPAEVAADKMHGVVKFDTQTGKQKKNKTKTLS 404

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YF ++L+AEA+ D  +VAIHAAMGGGTGLN F + FP RCFDVGIAEQHA+TFAAGL
Sbjct: 405 YTQYFVDSLVAEAKEDDKIVAIHAAMGGGTGLNTFQKEFPARCFDVGIAEQHAITFAAGL 464

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 465 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFM 524

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS EAEL +MVATA AIDDRPSCFRYPRGNGIG  LP  NKG  +EVG G
Sbjct: 525 ACLPNMVVMAPSCEAELMNMVATAVAIDDRPSCFRYPRGNGIGSILPANNKGTLIEVGTG 584

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG RVALLGYGT VQSCLAAS +L+  G+ +TVADARFCKPLD  LI+ LA  HEV
Sbjct: 585 RVIKEGNRVALLGYGTIVQSCLAASEVLKKIGISVTVADARFCKPLDGNLIKQLANEHEV 644

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF SHV  FLA +GLLDG +KWR ++LPDRYI+HG+ +DQ+ +AGL+  H
Sbjct: 645 LITVEEGSIGGFSSHVSHFLALNGLLDGHLKWRAMMLPDRYIEHGAQSDQIEEAGLSSKH 704

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATV +++G ++E L  ++
Sbjct: 705 IAATVLSLIGGSKETLHALN 724


>gi|357517205|ref|XP_003628891.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355522913|gb|AET03367.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 736

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/582 (69%), Positives = 476/582 (81%), Gaps = 26/582 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+T GL+GF KR ES +D FG GHSSTSISAGLGMA+ RDL G+KN+V++VIGDGA
Sbjct: 153 MHTIRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAIARDLLGKKNSVISVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEA+NNAG+LDS++IVILNDNKQVSLPTATLDGP  PVGALSS LS++Q++R  
Sbjct: 213 MTAGQAYEALNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSTLSKIQASRKF 272

Query: 121 RELREVAK--------------------------GVTKQIGGPMHELAAKVDEYARGMIS 154
           R+LRE  K                           +TKQIGG  H +A+KVD+YAR  IS
Sbjct: 273 RKLREATKVSPFRPLYYSKTSIPFWNLTLIYLLQNITKQIGGQTHLVASKVDKYARDFIS 332

Query: 155 GSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA 214
           GSGS+LFEELG+YYIGP+DGHN++DLV I E+VK T  +GPVLIH+VTEKG+GYP A  A
Sbjct: 333 GSGSSLFEELGMYYIGPMDGHNIEDLVNIFEKVKATPASGPVLIHIVTEKGKGYPPAVAA 392

Query: 215 ADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNL 274
           AD+ HGV KFDP TG QFK    T +YT YFA++LI EAE+D  +VAIHAAMGGGTGLN 
Sbjct: 393 ADRMHGVVKFDPKTGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNY 452

Query: 275 FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPV 334
           F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYS+F+QR YDQVVHDVDLQKLPV
Sbjct: 453 FQKRFPDRCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSTFLQRGYDQVVHDVDLQKLPV 512

Query: 335 RFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCF 394
           RFAMDRAGLVGADGPTHCG+FD+TFMACLPNM+VMAPSDEAEL +MVATAAAIDDRPSCF
Sbjct: 513 RFAMDRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCF 572

Query: 395 RYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLR 454
           R+PRGNGIG +LP  NKG PLE+GKGRIL+EG RVA+LGYG  VQ C+ A+ +L + G+ 
Sbjct: 573 RFPRGNGIGADLPLHNKGTPLEIGKGRILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVY 632

Query: 455 LTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRP 514
           +TV+DARFCKPLD  LIR LA+ HE+LITVEEGSIGGFGSHV QFL+  GLLDG +K R 
Sbjct: 633 VTVSDARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRS 692

Query: 515 LVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 556
           ++LPDRYIDHG+P DQ+ +AGL+  HI ATV ++L   +EAL
Sbjct: 693 MMLPDRYIDHGAPNDQIDEAGLSSKHILATVLSLLEMPKEAL 734


>gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate synthase [Andrographis paniculata]
          Length = 585

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/565 (71%), Positives = 472/565 (83%), Gaps = 4/565 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  GL+GF KR ES YD FG GHSSTSISA LGMAVGRDL G+ N+V++VIGDGA
Sbjct: 21  MHTIRQGFGLAGFPKRDESPYDAFGAGHSSTSISAALGMAVGRDLLGKSNHVISVIGDGA 80

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++I++LNDN QVSLPTAT+DGP PPVGALS AL+RLQ++R  
Sbjct: 81  MTAGQAYEAMNNAGFLDSNLIIVLNDNNQVSLPTATVDGPAPPVGALSEALTRLQASRKF 140

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK +TKQ+G  +HE AAKVD Y RGM     +TLFEELGLYYIGPVDGH+++DL
Sbjct: 141 RLLREAAKSMTKQMGEHVHETAAKVDTYVRGMAGPPRATLFEELGLYYIGPVDGHSIEDL 200

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL++VK     GPVLIH++TEKG+GY  AE AADK HGV KFD  TGKQ KS ++T+S
Sbjct: 201 VHILKKVKEMPAPGPVLIHILTEKGKGYSPAEAAADKMHGVVKFDVRTGKQAKSKSKTKS 260

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+L+AEA+ D  +VAIHAAMGGGTGLN+F ++FP RCFDVGIAEQHAVTFAAGL
Sbjct: 261 YTQYFAESLVAEAKQDDKIVAIHAAMGGGTGLNIFQKQFPDRCFDVGIAEQHAVTFAAGL 320

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRF MDRAGLVGADGPTHCG+FD T+M
Sbjct: 321 ATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFIMDRAGLVGADGPTHCGAFDTTYM 380

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HM+ATAA IDD+PS  RYPRGNGIG +LP  NKG PL++GKG
Sbjct: 381 ACLPNMVVMAPSDEAELMHMIATAATIDDQPSSIRYPRGNGIGADLPADNKGTPLQIGKG 440

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA++G+G  VQ+C+AA+A+L+ +G+ +TVADARFCKPLD  LIR LAK HEV
Sbjct: 441 RILREGSRVAIMGFGAVVQNCMAAAAILDQHGVHVTVADARFCKPLDGGLIRQLAKEHEV 500

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGS+GGF SHV QFL+ +G LDG +KWRP+VLPDRYIDHG+  DQ+ +AGL+P H
Sbjct: 501 LVTVEEGSVGGFSSHVAQFLSLNGFLDGKLKWRPMVLPDRYIDHGAQVDQIEEAGLSPKH 560

Query: 541 IAATVFNIL----GQTREALEIMSF 561
           IA TV  ++    G+ R  L  + F
Sbjct: 561 IACTVMAMVSGDGGKDRLKLIQLEF 585


>gi|147855372|emb|CAN83878.1| hypothetical protein VITISV_003880 [Vitis vinifera]
          Length = 713

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/562 (74%), Positives = 471/562 (83%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAV RDL  + N+V+AVIGDGA
Sbjct: 152 MHTIRQTSGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGA 211

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS+ I+ILNDN QVSLPTAT DGP PPVGALS AL RLQS+R  
Sbjct: 212 MTAGQAYEAMNNAGYLDSNXIIILNDNNQVSLPTATADGPAPPVGALSKALKRLQSSRKF 271

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++L + AK +T+++GG  HE+AAKVD Y RGMI+G G+  FEELGL+YIGPVDGHN+++L
Sbjct: 272 QQLHQTAKAITERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLHYIGPVDGHNMEEL 331

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+ VK     G VLIH+VTEKG+GY  AE A DK HGV KFDP +GKQ KS + T S
Sbjct: 332 VHILKVVKAIPGQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLS 391

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+LIAEAE D  +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 392 YTQYFAESLIAEAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGL 451

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYSSF+QRA+DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FD TFM
Sbjct: 452 ATEGLKPFCAIYSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFM 511

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPS E EL +MVATAAAIDDRPSCFRYPRGNGIG  +PP NKGIPLEVGKG
Sbjct: 512 ACLPNMVVMAPSCERELMNMVATAAAIDDRPSCFRYPRGNGIGSIIPPFNKGIPLEVGKG 571

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG RVA+LGYGT VQSC+AAS LL+  G+  TV DARFCKPLD  LIR LA  HEV
Sbjct: 572 RVLEEGTRVAILGYGTIVQSCVAASHLLQRFGISATVVDARFCKPLDGDLIRQLALEHEV 631

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV  FLA +GLLDGT+KWR ++LPDRYIDHGS  +Q+ +AGLT  H
Sbjct: 632 LLTVEEGSIGGFGSHVSHFLALNGLLDGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKH 691

Query: 541 IAATVFNILGQTREALEIMSFK 562
           IAATV  ++G+ ++AL  +  K
Sbjct: 692 IAATVLALIGENKDALHQLKLK 713


>gi|224177807|gb|ACN38875.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase [Linum
           usitatissimum]
          Length = 443

 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/443 (93%), Positives = 433/443 (97%)

Query: 71  NNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGV 130
           NNAGYLDSDMIVILNDNKQVSLPTA LDGPIPPVGALSSALSRLQSNRPLRELREVAKGV
Sbjct: 1   NNAGYLDSDMIVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGV 60

Query: 131 TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT 190
           TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH++DD+VAIL+EVK+T
Sbjct: 61  TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHSIDDIVAILKEVKST 120

Query: 191 KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALI 250
           K TGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG+QFKSSA TQSYTTYFAEALI
Sbjct: 121 KATGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGQQFKSSAPTQSYTTYFAEALI 180

Query: 251 AEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA 310
           AEAE DKDVVAIHAAMGGGTGLN FLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA
Sbjct: 181 AEAEADKDVVAIHAAMGGGTGLNQFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCA 240

Query: 311 IYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMA 370
           IYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNMVVMA
Sbjct: 241 IYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMA 300

Query: 371 PSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVA 430
           PSDEAELFHMVATAAAIDDRPSCFRYPRGNG+GVELPPGNKG+PLEVG+GRILIEGERVA
Sbjct: 301 PSDEAELFHMVATAAAIDDRPSCFRYPRGNGLGVELPPGNKGVPLEVGQGRILIEGERVA 360

Query: 431 LLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIG 490
           LLGYG AVQSCLAA++L+E +GL++TVADARFCKPLD ALIRSLAK+HEVLITVEEGSIG
Sbjct: 361 LLGYGAAVQSCLAAASLVEPHGLKVTVADARFCKPLDQALIRSLAKTHEVLITVEEGSIG 420

Query: 491 GFGSHVVQFLAQDGLLDGTVKWR 513
           GFGSHVVQFLA DGLLDG +KWR
Sbjct: 421 GFGSHVVQFLALDGLLDGKLKWR 443


>gi|340764675|gb|AEK69519.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Alpinia officinarum]
          Length = 711

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/558 (72%), Positives = 461/558 (82%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+TDGL+GF KR ESE+D FG GHSSTSISAGLGMAV RDL+G+K++V+AVIGDGA
Sbjct: 153 MHTIRRTDGLAGFPKREESEHDAFGVGHSSTSISAGLGMAVARDLQGKKSHVIAVIGDGA 212

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDS++IV+LNDN+  SLPTA LD P  PVGALS AL+ LQS+  L
Sbjct: 213 MTAGQAYEAMNNAGYLDSNLIVVLNDNRHGSLPTAALDEPATPVGALSKALTTLQSSPKL 272

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK +TKQIGG  +ELA+KVDEYARGMIS SGSTLFEELGLYYIGPVDGHNV+DL
Sbjct: 273 RMLREAAKSLTKQIGGQTYELASKVDEYARGMISASGSTLFEELGLYYIGPVDGHNVEDL 332

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH+VTEK + YP  E AADK HGV K DP TGKQFK+ + + S
Sbjct: 333 VTIFDKVKALPAPGPVLIHIVTEKEKEYPPIEAAADKMHGVMKIDPKTGKQFKTKSPSLS 392

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI EAEVD  +VA+HAAMG G GL+ F  +FP +CFDVGIAEQHAVTFAAGL
Sbjct: 393 YTQCFAESLIKEAEVDDRIVAVHAAMGSGIGLDYFQNKFPEKCFDVGIAEQHAVTFAAGL 452

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAI+SSF+QR YDQVV DVDLQKLPVRFA+D AGLVG DGPTH G FD+ +M
Sbjct: 453 ATEGLKPFCAIHSSFLQRGYDQVVRDVDLQKLPVRFALDWAGLVGGDGPTHSGVFDIAYM 512

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATA AIDDRP CFR+P+G G+GV LPP +KG PLE+GKG
Sbjct: 513 ACLPNMVVMAPSDEAELMHMVATAVAIDDRPCCFRFPKGTGVGVPLPPNHKGTPLEIGKG 572

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           ++L+EG RVA+LGYG+ VQ+CL A+  L + G+  TVADARFCKPLD  LIR LA  HE+
Sbjct: 573 KVLMEGNRVAILGYGSIVQTCLKAADSLTACGIFATVADARFCKPLDAVLIRKLANEHEI 632

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV+QFL+  G LDG VK R LVLPDRYIDHGSP DQ   AGLT  H
Sbjct: 633 LITVEEGSIGGFGSHVMQFLSLRGFLDGRVKMRSLVLPDRYIDHGSPEDQFESAGLTFKH 692

Query: 541 IAATVFNILGQTREALEI 558
           IA TV  +LG+ +EAL+ 
Sbjct: 693 IAGTVLQMLGRPKEALQF 710


>gi|229463110|gb|ACQ66107.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Salvia miltiorrhiza]
          Length = 724

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/560 (69%), Positives = 467/560 (83%), Gaps = 1/560 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL  + N+V++VIGDGA
Sbjct: 164 MHTIRQTFGLAGFPKRDESAHDAFGAGHSSTSISAGLGMAVGRDLLHKNNHVISVIGDGA 223

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEA+NNAG+LDS++I++LNDNKQVSLPTAT+DGP PPVGALS AL+RLQ++R  
Sbjct: 224 MTAGQAYEALNNAGFLDSNLIIVLNDNKQVSLPTATIDGPAPPVGALSKALTRLQASRKF 283

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKG+T+Q+G   HE+A+KVD Y +GM+   G++LFEELG+YYIGPVDGHNV+D 
Sbjct: 284 RQLREAAKGMTRQMGEQAHEIASKVDTYMKGMMGKPGASLFEELGIYYIGPVDGHNVEDP 343

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK     GPVLIH++TEKG+GY  AE AADK HGV KFDP TGKQ KS   T+S
Sbjct: 344 VYIFKKVKEMPAPGPVLIHIITEKGKGYSPAEVAADKMHGVVKFDPTTGKQLKSKTNTKS 403

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAE+L+AEAE D  +VAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 404 YTQYFAESLVAEAEHDDRIVAIHAAMGGGTGLNYFQKRFPDRCFDVGIAEQHAVTFAAGL 463

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFC IYSSF+QR YDQVVHDVDLQKLPVRF MDRAG+VGADGPTHCG+FD T+M
Sbjct: 464 ATEGLKPFCTIYSSFLQRGYDQVVHDVDLQKLPVRFMMDRAGVVGADGPTHCGAFDTTYM 523

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM VMA SD+ +L HM+ATAAAIDDR SC  YP G      LPP NKG PLE+GKG
Sbjct: 524 ACLPNMFVMASSDKLDLMHMIATAAAIDDRLSCVIYPEGTR-RAPLPPNNKGTPLEIGKG 582

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA+LG+GT VQ+CLAA+ LL+ +G+ +TVADARFCKPLD  LI+ L + HEV
Sbjct: 583 RILKEGSRVAILGFGTIVQNCLAAAQLLQEHGISVTVADARFCKPLDGDLIKKLVQEHEV 642

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF +H+  FL+ +GLLDG +KWRP+VLPDRYIDHG+  DQ+ +AGL+P H
Sbjct: 643 LITVEEGSIGGFSAHISHFLSLNGLLDGNLKWRPMVLPDRYIDHGAQTDQIEEAGLSPKH 702

Query: 541 IAATVFNILGQTREALEIMS 560
           IA TV +++G  +++L +++
Sbjct: 703 IAGTVVSLIGGGKDSLHLIN 722


>gi|186510290|ref|NP_850620.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
 gi|332642995|gb|AEE76516.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
          Length = 641

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/511 (78%), Positives = 440/511 (86%), Gaps = 32/511 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGA
Sbjct: 151 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 210

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN   
Sbjct: 211 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC-- 268

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                         GMI  + STLFEELG +Y+GPVDGHN+DDL
Sbjct: 269 ------------------------------GMIRETSSTLFEELGFHYVGPVDGHNIDDL 298

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQS
Sbjct: 299 VSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQS 358

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 359 YTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 418

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFM
Sbjct: 419 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFM 478

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+G
Sbjct: 479 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRG 538

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 539 RILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEV 598

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           LITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 599 LITVEEGSIGGFGSHVVQFLALDGLLDGKLK 629


>gi|209529759|gb|ACI49774.1| At3g21500 [Arabidopsis thaliana]
          Length = 629

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/511 (78%), Positives = 440/511 (86%), Gaps = 32/511 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGA
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 198

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN   
Sbjct: 199 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC-- 256

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                         GMI  + STLFEELG +Y+GPVDGHN+DDL
Sbjct: 257 ------------------------------GMIRETSSTLFEELGFHYVGPVDGHNIDDL 286

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQS
Sbjct: 287 VSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQS 346

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 347 YTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 406

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFM
Sbjct: 407 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFM 466

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+G
Sbjct: 467 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRG 526

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 527 RILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEV 586

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           LITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 587 LITVEEGSIGGFGSHVVQFLALDGLLDGKLK 617


>gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
           thaliana]
          Length = 629

 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/511 (78%), Positives = 440/511 (86%), Gaps = 32/511 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGA
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 198

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN   
Sbjct: 199 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC-- 256

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                         GMI  + STLFEELG +Y+GPVDGHN+DDL
Sbjct: 257 ------------------------------GMIRETSSTLFEELGFHYVGPVDGHNIDDL 286

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQS
Sbjct: 287 VSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQS 346

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 347 YTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 406

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FD+TFM
Sbjct: 407 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDMTFM 466

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+G
Sbjct: 467 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRG 526

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 527 RILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEV 586

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           LITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 587 LITVEEGSIGGFGSHVVQFLALDGLLDGKLK 617


>gi|51969370|dbj|BAD43377.1| putative 1-D-deoxyxylulose 5-phosphate synthase [Arabidopsis
           thaliana]
          Length = 629

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/511 (78%), Positives = 440/511 (86%), Gaps = 32/511 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGA
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 198

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN   
Sbjct: 199 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC-- 256

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                         GMI  + STLFEELG +Y+GPVDGHN+DDL
Sbjct: 257 ------------------------------GMIRETSSTLFEELGFHYVGPVDGHNIDDL 286

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYHGV KFDP TGKQFK+ ++TQS
Sbjct: 287 VSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYHGVLKFDPETGKQFKNISKTQS 346

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 347 YTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 406

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQ+LPVRFA+DRAGL+GADGPTHCG+FDVTFM
Sbjct: 407 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQELPVRFAIDRAGLMGADGPTHCGAFDVTFM 466

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+G
Sbjct: 467 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRG 526

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 527 RILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEV 586

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           LITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 587 LITVEEGSIGGFGSHVVQFLALDGLLDGKLK 617


>gi|412990479|emb|CCO19797.1| 1-deoxy-D-xylulose-5-phosphate (DXP) synthase, plastid precursor
           [Bathycoccus prasinos]
          Length = 727

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/568 (69%), Positives = 468/568 (82%), Gaps = 8/568 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+T+RQTDGLS FTKRSES +DCFG GHSSTSISAGLGMAV RD++G+ N V+AVIGDGA
Sbjct: 159 MNTIRQTDGLSPFTKRSESPFDCFGAGHSSTSISAGLGMAVARDMQGKSNQVIAVIGDGA 218

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMNNAGYLD++MI+ILNDN+QVSLPT        PVGALSS  +RLQS++PL
Sbjct: 219 ITGGMAYEAMNNAGYLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSSTFARLQSSKPL 278

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE AK +TKQ+  P+ E+ AKVDEYARGMISGSG+TLFEELGLYYIG VDGHN++DL
Sbjct: 279 RELRESAKAITKQMPTPVQEVTAKVDEYARGMISGSGATLFEELGLYYIGTVDGHNLNDL 338

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK TK+ GPVLIHVVTEKGRGY +AE A DKYHGV+KFD A+G+Q K+S    +
Sbjct: 339 VAILQEVKETKSVGPVLIHVVTEKGRGYSFAESAQDKYHGVSKFDLASGEQKKASTTIPT 398

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+A++ EA +D  +VA+HAAMGGGTG+N F + F  R FDVGIAEQHAVTFAAGL
Sbjct: 399 YTQVFADAMVGEAMLDDSIVAVHAAMGGGTGINHFEKYFAERTFDVGIAEQHAVTFAAGL 458

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKP C IYS+F+QR +DQVVHDV LQKLPVRFAMDRAGLVGADGPTH G++D+TFM
Sbjct: 459 AAEGLKPMCTIYSTFLQRGFDQVVHDVALQKLPVRFAMDRAGLVGADGPTHAGAYDITFM 518

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP--------PGNKG 412
           ACLP+MVVMAP +EAEL HM+AT+ AIDD PSCFRYPRG GIG++L         PG KG
Sbjct: 519 ACLPDMVVMAPRNEAELCHMIATSFAIDDCPSCFRYPRGPGIGLDLELEGVKVGNPGYKG 578

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           +PLEVGKG++L EG    LLGYGT   +CL A+ LLE  G+ +TVADARFCKPLD  LIR
Sbjct: 579 VPLEVGKGQVLREGTHACLLGYGTPTNNCLKAAKLLEEYGISVTVADARFCKPLDEKLIR 638

Query: 473 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
            LAK H +L+TVEEGS+GGF SHV+QFLA DGLLDG +K RPL+LPD  I+HGS   QL 
Sbjct: 639 RLAKEHPILVTVEEGSVGGFASHVLQFLALDGLLDGNLKVRPLLLPDVPIEHGSDQFQLE 698

Query: 533 QAGLTPSHIAATVFNILGQTREALEIMS 560
           QAGLTP+HIA+TV ++ G+T E+L+I++
Sbjct: 699 QAGLTPAHIASTVLSLQGKTAESLQILA 726


>gi|21593831|gb|AAM65798.1| 1-D-deoxyxylulose 5-phosphate synthase, putative [Arabidopsis
           thaliana]
          Length = 628

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/511 (78%), Positives = 440/511 (86%), Gaps = 33/511 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGA
Sbjct: 139 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 198

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSNR  
Sbjct: 199 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNR-- 256

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                         GMI  + STLFEELG +Y+GPVDGHN+DDL
Sbjct: 257 ------------------------------GMIRETSSTLFEELGFHYVGPVDGHNIDDL 286

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYH V KFDP TGKQFK+ ++TQS
Sbjct: 287 VSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYH-VLKFDPETGKQFKNISKTQS 345

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 346 YTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 405

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFM
Sbjct: 406 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFM 465

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+G
Sbjct: 466 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRG 525

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 526 RILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEV 585

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           LITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 586 LITVEEGSIGGFGSHVVQFLALDGLLDGKLK 616


>gi|145342439|ref|XP_001416190.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
           [Ostreococcus lucimarinus CCE9901]
 gi|144576415|gb|ABO94483.1| 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor
           [Ostreococcus lucimarinus CCE9901]
          Length = 746

 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/568 (70%), Positives = 466/568 (82%), Gaps = 8/568 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+TMRQT GLS FTKRSES YDCFG GHSSTSISAGLGMAV RD++G  N+V+++IGDGA
Sbjct: 177 MNTMRQTGGLSPFTKRSESPYDCFGAGHSSTSISAGLGMAVARDMQGGDNHVISIIGDGA 236

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMNNAG+LD++MI+ILNDN+QVSLPT        PVGALSS  +RLQS+RPL
Sbjct: 237 ITGGMAYEAMNNAGFLDTNMIIILNDNQQVSLPTQYNSMNQDPVGALSSTFARLQSSRPL 296

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE AK +TKQ+  P+ E+ AKVDEYARGMISGSGSTLFEELGLYYIG VDGHN++DL
Sbjct: 297 RELRESAKAITKQMPTPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIGTVDGHNLEDL 356

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK TK+ GPVLIH+VTEKGRGY YAE A DKYHGV+KFD A+G+Q KS+    +
Sbjct: 357 VAILQEVKETKSVGPVLIHIVTEKGRGYSYAEDAQDKYHGVSKFDLASGEQSKSTDTIPT 416

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALI EA  D+ VVA+HAAMGGGTGLN F + F  R +DVGIAEQHAVTFAAGL
Sbjct: 417 YTKVFADALIGEAMADEKVVAVHAAMGGGTGLNHFEKYFADRTYDVGIAEQHAVTFAAGL 476

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP C IYS+F+QR +DQVVHDV LQKLPVRFAMDRAGLVGADGPTH G++DVTFM
Sbjct: 477 ACEGLKPMCTIYSTFLQRGWDQVVHDVALQKLPVRFAMDRAGLVGADGPTHAGAYDVTFM 536

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--------LPPGNKG 412
           ACLP+MVVMAP DEAEL HMVAT+ AIDDRPSCFRYPRG G+GV         L PG KG
Sbjct: 537 ACLPDMVVMAPMDEAELCHMVATSLAIDDRPSCFRYPRGAGVGVNMENESVKVLNPGYKG 596

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           + L++GKGR+L EG  V LLGYGT   +CL A+ +L+  G+  TVADARFCKPLD  LIR
Sbjct: 597 MVLDIGKGRVLREGTDVVLLGYGTPTNNCLLAAQMLQEFGVSATVADARFCKPLDVELIR 656

Query: 473 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
            LAKSH V ITVEEGSIGGF SHV+ FLA DGLLDG +K RP+VLPDR IDHGS A QL 
Sbjct: 657 RLAKSHPVFITVEEGSIGGFASHVLHFLATDGLLDGGLKVRPMVLPDRPIDHGSYAFQLN 716

Query: 533 QAGLTPSHIAATVFNILGQTREALEIMS 560
           +AGL+ SHIA+T  +++G+  E+LE+++
Sbjct: 717 EAGLSVSHIASTALSLVGKQNESLEVLA 744


>gi|186510292|ref|NP_566686.2| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
 gi|332642996|gb|AEE76517.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Arabidopsis thaliana]
          Length = 640

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/511 (78%), Positives = 439/511 (85%), Gaps = 33/511 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSG+TKR ESE+D FGTGHSST++SAGLGMAVGRDLKG  N+VV+VIGDGA
Sbjct: 151 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGLGMAVGRDLKGMNNSVVSVIGDGA 210

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYL S+MIVILNDNKQVSLPTA LDGP  PVGALS ALSRLQSN   
Sbjct: 211 MTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCALSRLQSNC-- 268

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                         GMI  + STLFEELG +Y+GPVDGHN+DDL
Sbjct: 269 ------------------------------GMIRETSSTLFEELGFHYVGPVDGHNIDDL 298

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V+ILE +K+TKT GPVLIHVVTEKGRGYPYAE+A DKYH V KFDP TGKQFK+ ++TQS
Sbjct: 299 VSILETLKSTKTIGPVLIHVVTEKGRGYPYAERADDKYH-VLKFDPETGKQFKNISKTQS 357

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EALIAEAE DKD+VAIHAAMGGGT LNLF  RFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 358 YTSCFVEALIAEAEADKDIVAIHAAMGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGL 417

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYSSFMQRAYDQVVHDVDLQKLPVRFA+DRAGL+GADGPTHCG+FDVTFM
Sbjct: 418 ACEGLKPFCTIYSSFMQRAYDQVVHDVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFM 477

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNM+VMAPSDEAELF+MVATAAAIDDRPSCFRY RGNGIGV LPPGNKG+PL++G+G
Sbjct: 478 ACLPNMIVMAPSDEAELFNMVATAAAIDDRPSCFRYHRGNGIGVSLPPGNKGVPLQIGRG 537

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +GERVALLGYG+AVQ CL A+++L   GL++TVADARFCKPLD ALIRSLAKSHEV
Sbjct: 538 RILRDGERVALLGYGSAVQRCLEAASMLSERGLKITVADARFCKPLDVALIRSLAKSHEV 597

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           LITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 598 LITVEEGSIGGFGSHVVQFLALDGLLDGKLK 628


>gi|255070459|ref|XP_002507311.1| predicted protein [Micromonas sp. RCC299]
 gi|226522586|gb|ACO68569.1| predicted protein [Micromonas sp. RCC299]
          Length = 738

 Score =  817 bits (2110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/568 (69%), Positives = 469/568 (82%), Gaps = 8/568 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQT+GLS FTKRSES +DCFG GHSSTSISAGLGMAV RD++GR N+V+AVIGDGA
Sbjct: 170 MSTMRQTNGLSPFTKRSESPFDCFGAGHSSTSISAGLGMAVARDMQGRSNHVIAVIGDGA 229

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMNNAGYLD++MI+ILNDN+QVSLPT        PVGALSS  +RLQS++PL
Sbjct: 230 ITGGMAYEAMNNAGYLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSSTFARLQSSKPL 289

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE AK +TKQ+  P+ E+ AKVDEYARGMISGSGSTLFEELGLYYIG VDGHN+ DL
Sbjct: 290 RELRESAKAITKQMPVPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIGTVDGHNLQDL 349

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAILEEVK+T++ GPVLIH+VTEKGRGY YAE A DKYHGV+ FD A+GKQ KS++   +
Sbjct: 350 VAILEEVKSTRSVGPVLIHIVTEKGRGYSYAEAAQDKYHGVSTFDVASGKQKKSASGIPT 409

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT +FA+AL+ EA +D++VVA+HAAMGGGTGLN F + F  R FDVGIAEQHAVTF+AGL
Sbjct: 410 YTQFFADALVGEAGLDENVVAVHAAMGGGTGLNHFEKFFADRTFDVGIAEQHAVTFSAGL 469

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKP CA+YS+F+QR +DQVVHDV LQKLPVRFAMDRAGLVG DGPTH G++DVTFM
Sbjct: 470 AVEGLKPVCAVYSTFLQRGFDQVVHDVALQKLPVRFAMDRAGLVGEDGPTHAGAYDVTFM 529

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--------LPPGNKG 412
           ACLP+MVVMAP +EAEL HMVAT+ ++DDRPSCFRYPRG G+G++        L PG KG
Sbjct: 530 ACLPDMVVMAPMNEAELCHMVATSISVDDRPSCFRYPRGTGVGLDLIGEGVEMLRPGYKG 589

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
             LE+GKGRI+ EG  V LLGYGT    C+ A+ +L   G+ +TVADARFCKPLD  +IR
Sbjct: 590 GILEIGKGRIIREGIDVCLLGYGTCTNRCIEAAEVLREFGISVTVADARFCKPLDTKMIR 649

Query: 473 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
            LAKSH  +ITVE+GSIGGF SHV+QFLA DGLLDG +K RPL LPDR I+HGS +DQL 
Sbjct: 650 QLAKSHAAIITVEDGSIGGFASHVLQFLALDGLLDGNLKVRPLTLPDRPIEHGSLSDQLQ 709

Query: 533 QAGLTPSHIAATVFNILGQTREALEIMS 560
            AGL+ SHIA+T  ++LGQ ++ALE++S
Sbjct: 710 DAGLSSSHIASTALSVLGQKQQALEVLS 737


>gi|159488107|ref|XP_001702062.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
 gi|158271436|gb|EDO97255.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chlamydomonas reinhardtii]
          Length = 708

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/560 (69%), Positives = 460/560 (82%), Gaps = 5/560 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKR ESEYD FG GHSSTSISA LGMAVGRD+KG+KN+V+AVIGDGA
Sbjct: 139 MATIRQTNGLSGFTKRDESEYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGA 198

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMN+AG+LD +MIVILNDN+QVSLPT   +    PVGALSSAL+RLQ+NRPL
Sbjct: 199 ITGGMAYEAMNHAGFLDKNMIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPL 258

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE+AKGVTKQ+   + +  AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 259 RELREIAKGVTKQLPDVVQKATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDL 318

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A+L EV++ +T GPVL+HVVTEKGRGY  AE A DK HGV KFDP TGKQ ++  +  S
Sbjct: 319 IAVLSEVRSAETVGPVLVHVVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQVQAKTKAMS 378

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA+AL AEAE D  +VA+HAAM GGTGL  F ++FP R FDVGIAEQHAVTFAAGL
Sbjct: 379 YTNYFADALTAEAERDSRIVAVHAAMAGGTGLYRFEKKFPDRTFDVGIAEQHAVTFAAGL 438

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL PFC IYS+FMQR YDQ+VHDV LQKLPVRFAMDRAGLVGADG THCG+FDVTFM
Sbjct: 439 ACEGLVPFCTIYSTFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFM 498

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN-----KGIPL 415
           A LP+M+ MAPS+EAEL +MVAT AAIDD PSCFR+PRGNG+G++L         KG+PL
Sbjct: 499 ASLPHMITMAPSNEAELINMVATCAAIDDAPSCFRFPRGNGLGLDLAAYGISKDLKGVPL 558

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           EVGKG +  +G+ V L+ YG++V   LAA+ +LE +G+  TV DARFCKPLD  LIRS A
Sbjct: 559 EVGKGVVRRQGKDVCLVAYGSSVNEALAAADMLERDGVSTTVIDARFCKPLDTKLIRSAA 618

Query: 476 KSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           K H V+IT+EEGS+GGF +HV+QFLA +GLLDG +K+RP+ LPDRYIDHG   DQLA AG
Sbjct: 619 KEHPVMITIEEGSVGGFAAHVMQFLALEGLLDGGLKFRPMTLPDRYIDHGDYRDQLAMAG 678

Query: 536 LTPSHIAATVFNILGQTREA 555
           LT  HIA+T    LG+ ++A
Sbjct: 679 LTSQHIASTALTTLGRAKDA 698


>gi|4185881|emb|CAA07554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chlamydomonas reinhardtii]
          Length = 735

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/560 (69%), Positives = 460/560 (82%), Gaps = 5/560 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKR ESEYD FG GHSSTSISA LGMAVGRD+KG+KN+V+AVIGDGA
Sbjct: 166 MATIRQTNGLSGFTKRDESEYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGA 225

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMN+AG+LD +MIVILNDN+QVSLPT   +    PVGALSSAL+RLQ+NRPL
Sbjct: 226 ITGGMAYEAMNHAGFLDKNMIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPL 285

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE+AKGVTKQ+   + +  AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 286 RELREIAKGVTKQLPDVVQKATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDL 345

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A+L EV++ +T GPVL+HVVTEKGRGY  AE A DK HGV KFDP TGKQ ++  +  S
Sbjct: 346 IAVLSEVRSAETVGPVLVHVVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQVQAKTKAMS 405

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA+AL AEAE D  +VA+HAAM GGTGL  F ++FP R FDVGIAEQHAVTFAAGL
Sbjct: 406 YTNYFADALTAEAERDSRIVAVHAAMAGGTGLYRFEKKFPDRTFDVGIAEQHAVTFAAGL 465

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL PFC IYS+FMQR YDQ+VHDV LQKLPVRFAMDRAGLVGADG THCG+FDVTFM
Sbjct: 466 ACEGLVPFCTIYSTFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFM 525

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN-----KGIPL 415
           A LP+M+ MAPS+EAEL +MVAT AAIDD PSCFR+PRGNG+G++L         KG+PL
Sbjct: 526 ASLPHMITMAPSNEAELINMVATCAAIDDAPSCFRFPRGNGLGLDLAAYGISKDLKGVPL 585

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           EVGKG +  +G+ V L+ YG++V   LAA+ +LE +G+  TV DARFCKPLD  LIRS A
Sbjct: 586 EVGKGVVRRQGKDVCLVAYGSSVNEALAAADMLERDGVSTTVIDARFCKPLDTKLIRSAA 645

Query: 476 KSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           K H V+IT+EEGS+GGF +HV+QFLA +GLLDG +K+RP+ LPDRYIDHG   DQLA AG
Sbjct: 646 KEHPVMITIEEGSVGGFAAHVMQFLALEGLLDGGLKFRPMTLPDRYIDHGDYRDQLAMAG 705

Query: 536 LTPSHIAATVFNILGQTREA 555
           LT  HIA+T    LG+ ++A
Sbjct: 706 LTSQHIASTALTTLGRAKDA 725


>gi|357517201|ref|XP_003628889.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
 gi|355522911|gb|AET03365.1| 1-Deoxy-D-xylulose 5-phosphate synthase [Medicago truncatula]
          Length = 521

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/518 (73%), Positives = 441/518 (85%)

Query: 39  MAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD 98
           MAV RDL G+KN+V++VIGDGAMTAGQAYEAMNNAG++DS++IVILNDNKQVSLPTATLD
Sbjct: 1   MAVARDLLGKKNSVISVIGDGAMTAGQAYEAMNNAGFIDSNLIVILNDNKQVSLPTATLD 60

Query: 99  GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGS 158
           GP  PVGALSS LS++Q++R  R+LRE  K +TKQIGG  H +A+KVD+YAR  ISGSGS
Sbjct: 61  GPATPVGALSSTLSKIQASRKFRKLREATKNITKQIGGQTHLVASKVDKYARDFISGSGS 120

Query: 159 TLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKY 218
           +LFEELG+YYIGP+DGHN++DLV I E+VK     GPVLIH+VTEKG+GYP A  AAD+ 
Sbjct: 121 SLFEELGMYYIGPMDGHNIEDLVNIFEKVKAMPAPGPVLIHIVTEKGKGYPPALAAADRM 180

Query: 219 HGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRR 278
           HGV KFDP TG QFK    T +YT YFA++LI EAE+D  +VAIHAAMGGGTGLN F +R
Sbjct: 181 HGVVKFDPKTGHQFKPKPSTLAYTQYFADSLIKEAEMDNKIVAIHAAMGGGTGLNYFQKR 240

Query: 279 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAM 338
           FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAM
Sbjct: 241 FPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAM 300

Query: 339 DRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 398
           DRAGLVGADGPTHCG+FD+TFMACLPNM+VMAPSDEAEL +MVATAAAIDDRPSCFR+PR
Sbjct: 301 DRAGLVGADGPTHCGAFDITFMACLPNMIVMAPSDEAELMNMVATAAAIDDRPSCFRFPR 360

Query: 399 GNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVA 458
           GNGIG  LP  NKG PLE+GKGRIL+EG RVA+LGYG  VQ C+ A+ +L + G+ +TVA
Sbjct: 361 GNGIGANLPLNNKGTPLEIGKGRILLEGSRVAILGYGCMVQQCMKAAEMLRAVGVYVTVA 420

Query: 459 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLP 518
           DARFCKPLD  LIR LA+ HE+LITVEEGSIGGFGSHV QFL+  GLLDG +K R ++LP
Sbjct: 421 DARFCKPLDTDLIRLLAREHEILITVEEGSIGGFGSHVSQFLSLAGLLDGPLKLRSMMLP 480

Query: 519 DRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 556
           DRYIDHG+P DQ+ +AGL+  HI ATV ++L   +EAL
Sbjct: 481 DRYIDHGAPNDQIDEAGLSSKHILATVLSLLDMPKEAL 518


>gi|55733939|gb|AAV59446.1| putative 1-deoxy-D-xylulose 5-phosphate synthase [Oryza sativa
           Japonica Group]
          Length = 885

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/440 (86%), Positives = 408/440 (92%)

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R L  +  GVTKQIGG +HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN+DDL
Sbjct: 442 RVLHRLRHGVTKQIGGSVHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDL 501

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL EVK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T S
Sbjct: 502 ITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLS 561

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFAEALIAEAE D  VVAIHAAMGGGTGLN FLRRFP RCFDVGIAEQHAVTFAAGL
Sbjct: 562 YTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPNRCFDVGIAEQHAVTFAAGL 621

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVT+M
Sbjct: 622 ACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYM 681

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNGIGV LPP  KG+PLEVGKG
Sbjct: 682 ACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKG 741

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+EGERVALLGYG+AVQ CLAA++L+E +GL++TVADARFCKPLD  LIR LA SHEV
Sbjct: 742 RVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEV 801

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSH
Sbjct: 802 LLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSH 861

Query: 541 IAATVFNILGQTREALEIMS 560
           IAATVFN+LGQ REAL IM+
Sbjct: 862 IAATVFNVLGQAREALAIMT 881



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 123/149 (82%), Gaps = 21/149 (14%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLG---------------------M 39
           M TMRQT+GLSGFTKRSESEYD FGTGHSST+ISA LG                     M
Sbjct: 157 MPTMRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGNLLFFLQSLCIELPAYVRLAGM 216

Query: 40  AVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDG 99
           AVGRDLKG KNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDG
Sbjct: 217 AVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDG 276

Query: 100 PIPPVGALSSALSRLQSNRPLRELREVAK 128
           P PPVGALSSALS+LQS+RPLRELREVAK
Sbjct: 277 PAPPVGALSSALSKLQSSRPLRELREVAK 305


>gi|308800422|ref|XP_003074992.1| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
           [Ostreococcus tauri]
 gi|119358853|emb|CAL52263.2| Dxs 1-deoxy-D-xylulose-5-phosphate synthase plastid precursor (IC)
           [Ostreococcus tauri]
          Length = 741

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/568 (68%), Positives = 464/568 (81%), Gaps = 8/568 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+TMRQT GLS FTKRSES YDCFG GHSSTSISAGLGMAV RD++G   +V+++IGDGA
Sbjct: 172 MNTMRQTGGLSPFTKRSESPYDCFGAGHSSTSISAGLGMAVARDMQGEDFHVISIIGDGA 231

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMNNAG+LD++MI+ILNDN+QVSLPT        PVGALSS  +RLQS+RPL
Sbjct: 232 ITGGMAYEAMNNAGFLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSSTFARLQSSRPL 291

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE AK +TKQ+  P+ E+ AKVDEYARGMISGSGSTLFEELGLYYIG VDGHN++DL
Sbjct: 292 RELRESAKAITKQMPTPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIGTVDGHNLEDL 351

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK T++ GPVLIH+VTEKGRGY YAE A DKYHGV+KFD A+G+Q +      S
Sbjct: 352 VAILQEVKETRSVGPVLIHIVTEKGRGYSYAEDAQDKYHGVSKFDLASGRQSQLKENAPS 411

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALI EA +D  VVA+HAAMGGGTGLN F + F  R +DVGIAEQHAVTFAAGL
Sbjct: 412 YTKVFADALIGEAMMDDKVVAVHAAMGGGTGLNHFEKYFADRTYDVGIAEQHAVTFAAGL 471

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP C IYS+F+QR +DQVVHDV LQKLPVRFAMDRAGLVGADGPTH G++DVTFM
Sbjct: 472 ACEGLKPMCTIYSTFLQRGWDQVVHDVALQKLPVRFAMDRAGLVGADGPTHAGAYDVTFM 531

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP--------PGNKG 412
           ACLP+MVVMAP +EAEL HMVAT+ AIDDRPSCFRYPRG G+G+ +         PG KG
Sbjct: 532 ACLPDMVVMAPMNEAELCHMVATSLAIDDRPSCFRYPRGAGVGLNMEDESVKLVNPGYKG 591

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           + L++GKGR+L EG  V LLGYGT   +CL A+ +L+  G+ +TVADARFCKPLD  LIR
Sbjct: 592 MVLDIGKGRVLQEGTDVVLLGYGTPTNNCLQAAQMLQKFGVSVTVADARFCKPLDGELIR 651

Query: 473 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
            LAKSH + ITVEEG+IGGF SHV+ FLA DGLLD  +K+RP++LPDR IDHGS + Q+ 
Sbjct: 652 RLAKSHPIFITVEEGAIGGFASHVMHFLATDGLLDSGLKFRPMILPDRPIDHGSYSFQVN 711

Query: 533 QAGLTPSHIAATVFNILGQTREALEIMS 560
           +AGL+ SHIA+T  +++G+  E+LE+++
Sbjct: 712 EAGLSASHIASTALSLVGKQHESLEVLA 739


>gi|242043234|ref|XP_002459488.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
 gi|241922865|gb|EER96009.1| hypothetical protein SORBIDRAFT_02g005410 [Sorghum bicolor]
          Length = 517

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/520 (74%), Positives = 442/520 (85%), Gaps = 4/520 (0%)

Query: 39  MAVGRDLKGRKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD 98
           MAV RDL GRKN+V++VIGDGAMTAGQAYEAMNN+G+LD++MIV+LNDNKQVSLPTATLD
Sbjct: 1   MAVARDLLGRKNHVISVIGDGAMTAGQAYEAMNNSGFLDANMIVVLNDNKQVSLPTATLD 60

Query: 99  GPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGS 158
           GP  PVGALS AL++LQS+   R LRE AK VTKQIGGP HE+AAKVDEYARGMIS  GS
Sbjct: 61  GPSKPVGALSRALTKLQSSTKFRRLREAAKSVTKQIGGPTHEVAAKVDEYARGMISAWGS 120

Query: 159 TLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKY 218
           +LFEELGLYYIGPVDGH+V+DLV I E+VK     GPVLIH+VTEKG+GY  AE AAD+ 
Sbjct: 121 SLFEELGLYYIGPVDGHSVEDLVTIFEKVKAMPAPGPVLIHIVTEKGKGYLPAEAAADRM 180

Query: 219 HGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRR 278
           HGV KF+P+TGKQ KS + T SYT YFAE+L+     DK VVAIHAAMGGGTGLN F +R
Sbjct: 181 HGVVKFEPSTGKQLKSKSSTLSYTQYFAESLMGG---DK-VVAIHAAMGGGTGLNYFQKR 236

Query: 279 FPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAM 338
           FP RCFDVGI EQHAVTFAAGLA EGLKPFCAIYSSF+QR YDQVVHDVDLQ+LPVRFA+
Sbjct: 237 FPERCFDVGITEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAL 296

Query: 339 DRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPR 398
           D AGLVGADGPTHCG+FDVT+MACLPNMVVMAP+DEAEL HMVATAAAIDDRPSCFR+PR
Sbjct: 297 DHAGLVGADGPTHCGAFDVTYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPR 356

Query: 399 GNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVA 458
           GNG+G  LP GNKG PLEVG+GR+L+ G RVALLGYGT VQ+CL A+  L+ + + +TVA
Sbjct: 357 GNGVGAVLPAGNKGTPLEVGRGRVLVGGNRVALLGYGTMVQACLKAAEALKEHDVYVTVA 416

Query: 459 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLP 518
           DARFCKPLD  LIR LA  HEVLIT EEGSIGGFGSHV  +L+  GLLDG +K R + LP
Sbjct: 417 DARFCKPLDTGLIRELAAEHEVLITAEEGSIGGFGSHVGHYLSLTGLLDGPLKLRSMFLP 476

Query: 519 DRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEI 558
           DRYIDHG+P DQ+ +AGLTP HIAATV ++LG+  EA+++
Sbjct: 477 DRYIDHGAPQDQMEEAGLTPRHIAATVLSLLGRPLEAMQL 516


>gi|307103505|gb|EFN51764.1| hypothetical protein CHLNCDRAFT_59788 [Chlorella variabilis]
          Length = 720

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/555 (69%), Positives = 454/555 (81%), Gaps = 5/555 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  GLSGFTKRSES YD FG GHSSTSISA LGMAVGRD+KGRKNNVVAVIGDGA
Sbjct: 159 MHTIRQQGGLSGFTKRSESPYDPFGAGHSSTSISAALGMAVGRDVKGRKNNVVAVIGDGA 218

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMN+AG+LD++MIVILNDN+QVSLPT        PVGALSS L+RLQ+NR L
Sbjct: 219 ITGGMAYEAMNHAGFLDTNMIVILNDNQQVSLPTQYNGKNQEPVGALSSTLARLQANRQL 278

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE+AKGVTKQ+ G +    AK+DEYARGMISG+GSTLFEELG YYIGPVDGHN+ DL
Sbjct: 279 RELREIAKGVTKQLPGVIQNATAKIDEYARGMISGTGSTLFEELGFYYIGPVDGHNLQDL 338

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L E+K T+T GPVL+HVVTEKGRGY  AE A+DK HGV ++D  TGKQ K+ ++ QS
Sbjct: 339 IDVLSEIKTTETVGPVLLHVVTEKGRGYLPAESASDKMHGVVQYDTVTGKQVKAKSQAQS 398

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T YFA+AL+AEA+ D  +V IHAAMGGGTG+N F + FP R +DVGIAEQHAVTFAAGL
Sbjct: 399 FTNYFADALVAEAKKDSRIVGIHAAMGGGTGMNRFEKVFPERVYDVGIAEQHAVTFAAGL 458

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL PF AIYSSF+QR YDQVVHDV LQ LPVRFAMDRAGLVGADG THCG+FDV +M
Sbjct: 459 ACEGLAPFVAIYSSFLQRGYDQVVHDVSLQNLPVRFAMDRAGLVGADGATHCGAFDVAYM 518

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP-----PGNKGIPL 415
           ACLPNMVVMAPS+EAEL +MVAT AAIDDRPSCFR+PRG+G+G++L      P  KG P+
Sbjct: 519 ACLPNMVVMAPSNEAELINMVATCAAIDDRPSCFRFPRGSGVGIDLASEGITPDLKGTPM 578

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            +GK R+   G  +AL+GYG  V  CLAA+ LL+  G+  TV DARFCKPLD  ++R LA
Sbjct: 579 PIGKMRLRRSGADIALVGYGNPVNDCLAAAELLQQAGVSATVVDARFCKPLDTDMLRKLA 638

Query: 476 KSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           K H +++TVEEGSIGGF +HV+QFL  +GL+DG  K+RP+ LPDRYI+HG+ A+QLA+AG
Sbjct: 639 KEHPLMVTVEEGSIGGFAAHVMQFLCLEGLMDGNFKFRPMTLPDRYIEHGTQAEQLAEAG 698

Query: 536 LTPSHIAATVFNILG 550
           L+ SHIAAT   +LG
Sbjct: 699 LSASHIAATALAVLG 713


>gi|16226685|gb|AAL16232.1|AF428463_1 AT4g15560/dl3821w [Arabidopsis thaliana]
          Length = 428

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/427 (88%), Positives = 407/427 (95%)

Query: 130 VTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKN 189
           +TKQIGGPMH+LAAKVDEYARGMISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+
Sbjct: 1   MTKQIGGPMHQLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKS 60

Query: 190 TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEAL 249
           T+TTGPVLIHVVTEKGRGYPYAE+A DKYHGV KFDPATG+QFK++ +TQSYTTYFAEAL
Sbjct: 61  TRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEAL 120

Query: 250 IAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 309
           +AEAEVDKDVVAIHAAMGGGTGLNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC
Sbjct: 121 VAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFC 180

Query: 310 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVM 369
           AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VM
Sbjct: 181 AIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVM 240

Query: 370 APSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERV 429
           APSDEA+LF+MVATA AIDDRPSCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERV
Sbjct: 241 APSDEADLFNMVATAVAIDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERV 300

Query: 430 ALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI 489
           ALLGYG+AVQSCL A+ +LE  GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSI
Sbjct: 301 ALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSI 360

Query: 490 GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNIL 549
           GGFGSHVVQFLA DGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++
Sbjct: 361 GGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLI 420

Query: 550 GQTREAL 556
           G  REAL
Sbjct: 421 GAPREAL 427


>gi|303274126|ref|XP_003056386.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462470|gb|EEH59762.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 739

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/570 (69%), Positives = 456/570 (80%), Gaps = 8/570 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+TMR+T GLS FTKRSES +DCFG GHSSTSISAGLGMAV RD++GR N+V+AVIGDGA
Sbjct: 163 MNTMRRTRGLSPFTKRSESPFDCFGAGHSSTSISAGLGMAVARDMQGRSNHVIAVIGDGA 222

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMNNAGYLD++MI+ILNDN+QVSLPT        PVGALSS  +RLQS++PL
Sbjct: 223 ITGGMAYEAMNNAGYLDTNMIIILNDNQQVSLPTQYNSLNQDPVGALSSTFARLQSSKPL 282

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE AK +TKQ+  P+ E+ AKVDEYARGMISGSGSTLFEELGLYYIG VDGHN+ DL
Sbjct: 283 RELRESAKAITKQMPVPVQEVTAKVDEYARGMISGSGSTLFEELGLYYIGTVDGHNLQDL 342

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAILEEVK+T++ GPVLIH VTEKGRGY YAE A DKYHGV+ FD A+GKQ KSS    S
Sbjct: 343 VAILEEVKSTRSVGPVLIHTVTEKGRGYSYAEAAQDKYHGVSTFDVASGKQKKSSGGIPS 402

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALI EA  D+ VVA+HAAMGGGTGLN F R F  R FDVGIAEQHAVTFAAGL
Sbjct: 403 YTQVFADALIGEASRDESVVAVHAAMGGGTGLNHFERFFADRTFDVGIAEQHAVTFAAGL 462

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKP C IYS+F+QR +DQVVHDV LQKLPVRFAMDRAGLVG DGPTH G++DV FM
Sbjct: 463 AVEGLKPVCTIYSTFLQRGFDQVVHDVALQKLPVRFAMDRAGLVGEDGPTHAGAYDVAFM 522

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP--------PGNKG 412
           ACLP+MVVMAP +EAEL HMVAT+ AIDDRPSCFRYPRG G+G++L         PG +G
Sbjct: 523 ACLPDMVVMAPMNEAELCHMVATSIAIDDRPSCFRYPRGAGVGIDLEEEGVTMGNPGYRG 582

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
             +EVGKG+IL EG  + LLGYGT    CL A+ +LE   + +TVADARFCKPLD +LIR
Sbjct: 583 KVIEVGKGQILQEGTDLCLLGYGTCTNRCLEAAKMLEELDISVTVADARFCKPLDTSLIR 642

Query: 473 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
            LAK+H  +ITVEEGSIGGF SHV+QFLA DGLLDG +K RPL LPDR I+HG+   QL 
Sbjct: 643 QLAKNHAAMITVEEGSIGGFASHVLQFLALDGLLDGNLKVRPLTLPDRPIEHGAFEMQLL 702

Query: 533 QAGLTPSHIAATVFNILGQTREALEIMSFK 562
           +AGL+ S IA++  ++LG   E+  I  F 
Sbjct: 703 EAGLSSSQIASSALSLLGHELESGTIPRFN 732


>gi|413945325|gb|AFW77974.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
          Length = 442

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/434 (86%), Positives = 408/434 (94%)

Query: 127 AKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEE 186
           ++GVTKQIGG +HELAAKVDEYARGMISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +
Sbjct: 5   SQGVTKQIGGSVHELAAKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILND 64

Query: 187 VKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFA 246
           VK+TKTTGPVLIHVVTEKGRGYPYAE+AADKYHGVAKFDPATGKQFKS A+T SYT YFA
Sbjct: 65  VKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFA 124

Query: 247 EALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLK 306
           EALIAEAE D  +VAIHAAMGGGTGLN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLK
Sbjct: 125 EALIAEAEQDSKIVAIHAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLK 184

Query: 307 PFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNM 366
           PFCAIYSSF+QR YDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNM
Sbjct: 185 PFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNM 244

Query: 367 VVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEG 426
           VVMAPSDEAEL HMVATAAAIDDRPSCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG
Sbjct: 245 VVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEG 304

Query: 427 ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEE 486
           +RVALLGYG+AVQ CL A++L++ +GL++TVADARFCKPLDHALIRSLAKSHEVLITVEE
Sbjct: 305 DRVALLGYGSAVQYCLTAASLVQRHGLKVTVADARFCKPLDHALIRSLAKSHEVLITVEE 364

Query: 487 GSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVF 546
           GSIGGFGSHV QF+A DGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VF
Sbjct: 365 GSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVF 424

Query: 547 NILGQTREALEIMS 560
           NILGQ REAL IM+
Sbjct: 425 NILGQNREALAIMA 438


>gi|171850410|gb|ACB55417.1| 1-deoxy-D-xylulose 5-phosphate synthase [Picrorhiza kurrooa]
          Length = 687

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/565 (67%), Positives = 456/565 (80%), Gaps = 10/565 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLG-MAVGRDLKGRKNNVVAVIGDG 59
           M T+RQT GL+GF KR ES +D FG GHSSTSISA LG MAVGRDL G+ N+V++VIGDG
Sbjct: 129 MSTIRQTFGLAGFPKREESAHDAFGVGHSSTSISAALGGMAVGRDLLGKDNHVISVIGDG 188

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDN-KQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           AMTAGQAYEAMNNAG+LDS++I++LN+  KQVSLPTAT+DGP PPVGAL+ AL++LQ   
Sbjct: 189 AMTAGQAYEAMNNAGFLDSNLIIVLNEQTKQVSLPTATIDGPAPPVGALTKALTKLQLGT 248

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
             R+L E AKG+ KQ+GG   E AAK+D +A G++   G++LFEELG+YYIGP DGH+++
Sbjct: 249 SFRQLPEAAKGIAKQVGG---EGAAKLDTFASGLMGSPGASLFEELGIYYIGPGDGHSIN 305

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
             V   +++K     GPV++H+VTEKG+G P AE AA+K  GV KF+P+TGKQ KS  +T
Sbjct: 306 YFVYFFKQIKEMPAPGPVMVHIVTEKGKGSPPAEAAANKMRGVVKFEPSTGKQIKSKPKT 365

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT YFAE+LIA+A V+K +VA+HAAMGGGTGLN F + FP RCFDVGIA+QHAVTFAA
Sbjct: 366 LSYTQYFAESLIAKAAVNKKIVAVHAAMGGGTGLNFFQKHFPERCFDVGIAKQHAVTFAA 425

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA EGLKPFCAIYSSF+QR YDQVVHDVDLQKLPVRF MDRAGLVGADGPTHCG+FD T
Sbjct: 426 GLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFLMDRAGLVGADGPTHCGAFDTT 485

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FMACLPNMVVMAPSDEAEL HM+ATAA IDDRPSC RYPRGNG+G  LP  NKG PLEVG
Sbjct: 486 FMACLPNMVVMAPSDEAELMHMIATAAKIDDRPSCIRYPRGNGVGAILPKNNKGTPLEVG 545

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRIL EG RVA+LG+GT VQ+CLAAS LL+  G+ +TVADARFCKPLD  LIR LAK H
Sbjct: 546 KGRILREGSRVAILGFGTIVQTCLAASQLLQDQGVDVTVADARFCKPLDGELIRQLAKEH 605

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDG--TVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           EVLIT+E+G  GGF SHV  FL    L D    +KWR + LPDRYI+HGS  DQ+ +AGL
Sbjct: 606 EVLITIEDGQFGGFSSHVGHFLC---LTDTRRNLKWRAMGLPDRYIEHGSQDDQIEEAGL 662

Query: 537 TPSHIAATVFNILGQTREALEIMSF 561
           +  HIAATV +++G  +++L +M+ 
Sbjct: 663 SSRHIAATVLSLIGDGKDSLHLMNL 687


>gi|302850873|ref|XP_002956962.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
           nagariensis]
 gi|300257680|gb|EFJ41925.1| hypothetical protein VOLCADRAFT_107482 [Volvox carteri f.
           nagariensis]
          Length = 728

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/560 (68%), Positives = 451/560 (80%), Gaps = 13/560 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+GLSGFTKR ESEYD FG GHSSTSISA LGMAVGRD+K +KNNV+AVIGDGA
Sbjct: 165 MGTIRQTNGLSGFTKREESEYDPFGAGHSSTSISAALGMAVGRDVKSKKNNVIAVIGDGA 224

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMN+AG+LD +MIV        SLPT   +    PVGALSSAL+RLQ+NRPL
Sbjct: 225 ITGGMAYEAMNHAGFLDKNMIV--------SLPTQYNNKNQDPVGALSSALARLQANRPL 276

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELRE+AKGVTKQ+   + +  AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHNVDDL
Sbjct: 277 RELREIAKGVTKQLPDVVQKATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNVDDL 336

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA+L EVK+ +T GPVL+HVVTEKGRGY  AE A DK HGV KFDP TGKQ ++  +  S
Sbjct: 337 VAVLNEVKSAETVGPVLVHVVTEKGRGYLPAETAQDKMHGVVKFDPRTGKQQQAKTKAMS 396

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA+AL AEAE D  +VA+HAAM GGTGL  F +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 397 YTNYFADALTAEAERDSRIVAVHAAMAGGTGLYRFEKRFPERVFDVGIAEQHAVTFAAGL 456

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL PFC IYS+FMQR YDQ+VHDV LQKLPVRFAMDRAGLVGADG THCG+FDVTFM
Sbjct: 457 ACEGLVPFCTIYSTFMQRGYDQIVHDVSLQKLPVRFAMDRAGLVGADGSTHCGAFDVTFM 516

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN-----KGIPL 415
           A LP+M+ MAPS+EAEL +MVATAAAIDD PSCFR+PRGNG+G++L         KG PL
Sbjct: 517 ASLPHMITMAPSNEAELVNMVATAAAIDDAPSCFRFPRGNGLGLDLSQYGITKDLKGTPL 576

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+GKG +  +G+ V LL YG++V   LAA+ +LE +G+  TV DARFCKPLD AL+R  A
Sbjct: 577 EIGKGVVRRQGKDVCLLAYGSSVNEALAAAEMLERDGVSATVIDARFCKPLDTALVRMAA 636

Query: 476 KSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           + H V+I++EEGSIGGF +HV+QFLA +GLLDG +K+RP+ LPDRYI+HG   DQLA AG
Sbjct: 637 REHPVMISIEEGSIGGFAAHVMQFLALEGLLDGGLKFRPMTLPDRYIEHGDYRDQLAMAG 696

Query: 536 LTPSHIAATVFNILGQTREA 555
           LT  HIA+T    LG+ ++A
Sbjct: 697 LTAQHIASTALTTLGRAKDA 716


>gi|251826344|gb|ACT21080.1| 1-deoxy-D-xylulose 5-phosphate synthase [Dunaliella salina]
          Length = 753

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/555 (67%), Positives = 444/555 (80%), Gaps = 4/555 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+R+T GLSGFTKR+ESEYD FG GHSSTSISAGLGMAVGRD K R N VVAVIGDGA
Sbjct: 182 MQTIRKTGGLSGFTKRAESEYDPFGAGHSSTSISAGLGMAVGRDTKNRNNQVVAVIGDGA 241

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEAMN+AG+LD +MIVILNDN+QVSLPT        PVGA++  L+R+Q+NRPL
Sbjct: 242 ITGGMAYEAMNHAGFLDKNMIVILNDNQQVSLPTQYNSKNQAPVGAMAGTLARIQANRPL 301

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKG+TKQ+   +    AK+DEYARGMISG+GSTLFEELGLYYIGP+DGHN+DDL
Sbjct: 302 RELREVAKGMTKQLPTAVQNATAKIDEYARGMISGTGSTLFEELGLYYIGPLDGHNLDDL 361

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L EV++ +T GPVLIHV+TEKG GY  AE + DK HGV KFDP TGKQF S  +T S
Sbjct: 362 ISVLSEVRSAETIGPVLIHVITEKGHGYEPAEASQDKMHGVVKFDPKTGKQFASKPKTMS 421

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT YFA++LIAEA+ D  ++AIHAAM GGTGL  F    P R FDVGIAEQHAVTF+AGL
Sbjct: 422 YTNYFADSLIAEAKRDSRIMAIHAAMAGGTGLTRFENALPDRVFDVGIAEQHAVTFSAGL 481

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL PFC IYS+F+QR YDQVVHDV LQ LPVRFAMDRAG+VGADG THCG+FD+T+M
Sbjct: 482 ACEGLVPFCTIYSTFLQRGYDQVVHDVALQNLPVRFAMDRAGMVGADGATHCGAFDITYM 541

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN----KGIPLE 416
           A LPNMV MAPS+EAEL +MVATAAAIDDRPSCFR+PRGNGIGV+L        KG PLE
Sbjct: 542 ASLPNMVCMAPSNEAELINMVATAAAIDDRPSCFRFPRGNGIGVDLEAAGIKDMKGTPLE 601

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKG +  +G  V LL YG++V   +AA+  L+ +G+  TV DARFCKPLD  LIR  A+
Sbjct: 602 IGKGVVRRQGTDVCLLAYGSSVNEAMAAAEALQLDGVSATVIDARFCKPLDTDLIRKAAQ 661

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            H V++++EEG+IGGF +HV+QFL  +GLLDG +K+RP+ +PDR+I+HG   DQL  AGL
Sbjct: 662 EHPVMVSIEEGAIGGFAAHVMQFLTLEGLLDGGLKFRPMCMPDRFIEHGDYRDQLNLAGL 721

Query: 537 TPSHIAATVFNILGQ 551
           TP HIA T   ILG+
Sbjct: 722 TPGHIAGTALQILGR 736


>gi|384248886|gb|EIE22369.1| 1-deoxy-D-xylulose 5-phosphate synthase [Coccomyxa subellipsoidea
           C-169]
          Length = 732

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/577 (65%), Positives = 454/577 (78%), Gaps = 18/577 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLK-------------G 47
           M T+RQT GLSGFT R+ESEYD FG GHSSTSISA LGMAV RD K             G
Sbjct: 148 MPTIRQTGGLSGFTNRAESEYDPFGAGHSSTSISAALGMAVARDFKASTTSHDSNKYLCG 207

Query: 48  RKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGAL 107
           RKN+ VAVIGDGA+T G AYEAMN+AG+LD +MIV+LNDN+QVSLPT        PVGAL
Sbjct: 208 RKNHCVAVIGDGAITGGMAYEAMNHAGFLDKNMIVVLNDNQQVSLPTQYNGKNQDPVGAL 267

Query: 108 SSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLY 167
           S AL+RLQ+NRPLRELRE+AKGVTKQ+  P+ E  AK+DEYARGMISGSGSTLFEELGLY
Sbjct: 268 SGALARLQANRPLRELREIAKGVTKQLPEPIQEATAKIDEYARGMISGSGSTLFEELGLY 327

Query: 168 YIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA 227
           YIGP+DGHN++ L+ +L+EVK+T+T GPVLIH++TEKG GY  A  A+DK HGVAK+D A
Sbjct: 328 YIGPIDGHNLELLITMLQEVKSTETVGPVLIHIITEKGHGYEPAVLASDKMHGVAKYDIA 387

Query: 228 TGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVG 287
           TGKQ K  A++ SYT YFA+ALIAEAE+D  VV IHAAMGGGTG+N F +R+P R FDVG
Sbjct: 388 TGKQSKPKAKSGSYTNYFADALIAEAELDSRVVGIHAAMGGGTGMNRFEQRYPERTFDVG 447

Query: 288 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 347
           IAEQHAVTFAAGLA EG+ P CAIYSSF+QR YDQ+VHDV LQKLPVRFAMDRAGLVGAD
Sbjct: 448 IAEQHAVTFAAGLAAEGMIPMCAIYSSFLQRGYDQIVHDVALQKLPVRFAMDRAGLVGAD 507

Query: 348 GPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP 407
           G TH G  DVT+M  LPNM++MAPS+EAEL + VAT+ AIDD+PSC R+PRGNG+GV+  
Sbjct: 508 GATHSGFADVTYMGVLPNMIIMAPSNEAELCNAVATSVAIDDQPSCLRFPRGNGLGVDFA 567

Query: 408 PGN-----KGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARF 462
                   KG P ++GKG +   G+ VAL+ YGT   + LAA+ +LE +G+  TVAD RF
Sbjct: 568 AYGVSEKLKGTPWQIGKGVVRKGGKDVALVCYGTMTNNGLAAAEMLEKSGVTATVADMRF 627

Query: 463 CKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYI 522
           CKPLD  L+R +A+ H V+ITVEE  IGGFGSHV+  LA +GLLDG +K+RP+ LPDR+I
Sbjct: 628 CKPLDMPLLRQMAREHPVMITVEENGIGGFGSHVMHNLALEGLLDGNLKFRPMTLPDRFI 687

Query: 523 DHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIM 559
           +HGS  DQLA+AGL+ SHIAAT   +LG+ ++++ ++
Sbjct: 688 EHGSQTDQLAEAGLSASHIAATALTLLGRKKDSVALL 724


>gi|14334452|gb|AAK59424.1| putative DEF (CLA1) protein [Arabidopsis thaliana]
          Length = 406

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/405 (87%), Positives = 385/405 (95%)

Query: 152 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 211
           MISG+GS+LFEELGLYYIGPVDGHN+DDLVAIL+EVK+T+TTGPVLIHVVTEKGRGYPYA
Sbjct: 1   MISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYA 60

Query: 212 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 271
           E+A DKYHGV KFDPATG+QFK++ +TQSYTTYFAEAL+AEAEVDKDVVAIHAAMGGGTG
Sbjct: 61  ERADDKYHGVVKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTG 120

Query: 272 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 331
           LNLF RRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK
Sbjct: 121 LNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 180

Query: 332 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 391
           LPVRFAMDRAGLVGADGPTHCG+FDVTFMACLPNM+VMAPSDEA+LF+MVATA AIDDRP
Sbjct: 181 LPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRP 240

Query: 392 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 451
           SCFRYPRGNGIGV LPPGNKG+P+E+GKGRIL EGERVALLGYG+AVQSCL A+ +LE  
Sbjct: 241 SCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEER 300

Query: 452 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           GL +TVADARFCKPLD ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLA DGLLDG +K
Sbjct: 301 GLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLK 360

Query: 512 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 556
           WRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT  N++G  REAL
Sbjct: 361 WRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 405


>gi|223943853|gb|ACN26010.1| unknown [Zea mays]
 gi|413945324|gb|AFW77973.1| hypothetical protein ZEAMMB73_720473 [Zea mays]
          Length = 413

 Score =  753 bits (1945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/409 (87%), Positives = 384/409 (93%)

Query: 152 MISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYA 211
           MISG GS+LFEELGLYYIGPVDGHN+DDL+ IL +VK+TKTTGPVLIHVVTEKGRGYPYA
Sbjct: 1   MISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVTEKGRGYPYA 60

Query: 212 EKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTG 271
           E+AADKYHGVAKFDPATGKQFKS A+T SYT YFAEALIAEAE D  +VAIHAAMGGGTG
Sbjct: 61  ERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDSKIVAIHAAMGGGTG 120

Query: 272 LNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQK 331
           LN FLRRFP+RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSF+QR YDQVVHDVDLQK
Sbjct: 121 LNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQK 180

Query: 332 LPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRP 391
           LPVRFAMDRAGLVGADGPTHCG+FDV +MACLPNMVVMAPSDEAEL HMVATAAAIDDRP
Sbjct: 181 LPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVATAAAIDDRP 240

Query: 392 SCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESN 451
           SCFRYPRGNG+GV LPP  KG PLEVGKGRIL+EG+RVALLGYG+AVQ CL A++L++ +
Sbjct: 241 SCFRYPRGNGVGVPLPPNYKGTPLEVGKGRILLEGDRVALLGYGSAVQYCLTAASLVQRH 300

Query: 452 GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           GL++TVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV QF+A DGLLDG +K
Sbjct: 301 GLKVTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLDGKLK 360

Query: 512 WRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 560
           WRPLVLPDRYIDHGSPADQLA+AGLTPSHIAA+VFNILGQ REAL IM+
Sbjct: 361 WRPLVLPDRYIDHGSPADQLAEAGLTPSHIAASVFNILGQNREALAIMA 409


>gi|356557843|ref|XP_003547220.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 487

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/413 (84%), Positives = 380/413 (92%)

Query: 148 YARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRG 207
           +A GMIS SGSTLFEELGLYYIGPVDGHN++DLVAIL EVKNT+TTGP +IHVVTEKG G
Sbjct: 56  HAHGMISSSGSTLFEELGLYYIGPVDGHNMNDLVAILNEVKNTETTGPCVIHVVTEKGHG 115

Query: 208 YPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMG 267
           YPYAE+AA KYH V+KFDPATG+QFK+ A T+SY+TYFAEALIAEAE DKD++ IHAAMG
Sbjct: 116 YPYAERAAAKYHVVSKFDPATGEQFKAKATTKSYSTYFAEALIAEAEADKDIIGIHAAMG 175

Query: 268 GGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDV 327
           GGTG+N FLRRFPTRCFDVGIAEQHAVTFAAGLACEG KPFCAI SSFMQRAYDQVVHDV
Sbjct: 176 GGTGMNHFLRRFPTRCFDVGIAEQHAVTFAAGLACEGFKPFCAINSSFMQRAYDQVVHDV 235

Query: 328 DLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 387
           DLQKLPVRF +DRAGLVG DG THCG+FDVTFMACLPNMVVMAPSDEAELFHMVATAAAI
Sbjct: 236 DLQKLPVRFGIDRAGLVGPDGCTHCGAFDVTFMACLPNMVVMAPSDEAELFHMVATAAAI 295

Query: 388 DDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASAL 447
           DDRPSCFRYPRGNG+GVELPPGNKGIPLE+GKGRILIEGERVALLGYG+ VQSC+AA+ L
Sbjct: 296 DDRPSCFRYPRGNGVGVELPPGNKGIPLEIGKGRILIEGERVALLGYGSTVQSCVAAATL 355

Query: 448 LESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD 507
           L   GL  TV +ARFCKPLDH+LIRSLAKSHEVLITVEEGSIGGFGSHV QF+A DGLLD
Sbjct: 356 LGDLGLHATVVNARFCKPLDHSLIRSLAKSHEVLITVEEGSIGGFGSHVAQFMALDGLLD 415

Query: 508 GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 560
           G +KWRP+VLPD YIDHGSPADQL +A LTPSHIAATVFN+LGQ RE LE+M+
Sbjct: 416 GKLKWRPMVLPDCYIDHGSPADQLNEARLTPSHIAATVFNLLGQAREELEVMT 468


>gi|357466311|ref|XP_003603440.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
 gi|355492488|gb|AES73691.1| hypothetical protein MTR_3g107740 [Medicago truncatula]
          Length = 708

 Score =  712 bits (1838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/563 (61%), Positives = 427/563 (75%), Gaps = 8/563 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+R+ +GLSGFT R ESEYD FG GH   SISAGLGMAV RD+KGR+  VVAVI +  
Sbjct: 152 MKTIRKKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRRERVVAVISNWT 211

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             +GQ YEAM+NAGYLDS+++VILND++   LP    DG    V ALSS LSRLQS++  
Sbjct: 212 TMSGQVYEAMSNAGYLDSNLVVILNDSRHSLLPKIE-DGSKTSVNALSSTLSRLQSSKSF 270

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKGVTK+IG  MHELAAKVDEYARGM+   GSTLFEELGLYYIGPVDGHN++DL
Sbjct: 271 RKFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPPGSTLFEELGLYYIGPVDGHNIEDL 330

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA--ADKYHGVAKFDPATGKQFKSSART 238
           +++L+EV +  + GPVLIHV+T + +   + +K+   DK       +  +     ++ R 
Sbjct: 331 ISVLQEVASLDSMGPVLIHVITNENQVEEHNKKSYMTDKQQD----ESVSFDLLDNAGRL 386

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
           Q+Y   F E+L+AEAE DKD+V +HA +     L LF+ +FP R F+VGIAEQHAVTFA+
Sbjct: 387 QTYGDCFVESLVAEAEKDKDIVVVHAGITTEPSLKLFMEKFPDRIFNVGIAEQHAVTFAS 446

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GL+C GLKPFC I SSF+QRAYDQVVHDVD QK+PVRF +  AGLVG+DGP  CG+FD+T
Sbjct: 447 GLSCGGLKPFCIIPSSFLQRAYDQVVHDVDQQKVPVRFVITSAGLVGSDGPLQCGAFDIT 506

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM+CLPNM+VMAPSDEAEL HMVATAA I+D+P CFRYPRG  +G +    + GIP+E+G
Sbjct: 507 FMSCLPNMIVMAPSDEAELVHMVATAAHINDQPVCFRYPRGALVGKDEAILD-GIPIEIG 565

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRIL+EG+ VALLGYG+ VQ+CL A +LL + G+ +TVADARFCKPLD  L+R L K H
Sbjct: 566 KGRILVEGKDVALLGYGSMVQNCLKAYSLLANLGIEVTVADARFCKPLDIELLRQLCKHH 625

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
             LITVEEGSIGGFGSHV QF+A DGLLD  +KWRP+VLPD YI+H SP  QL QAGLT 
Sbjct: 626 SFLITVEEGSIGGFGSHVAQFIALDGLLDRRIKWRPIVLPDSYIEHASPNQQLNQAGLTG 685

Query: 539 SHIAATVFNILGQTREALEIMSF 561
            HIAAT  ++LG+TREAL  M  
Sbjct: 686 HHIAATALSLLGRTREALSFMCL 708


>gi|374341518|gb|AEZ35187.1| 1-deoxy-D-xylulose 5-phosphate synthase-III [Botryococcus braunii]
          Length = 730

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/566 (61%), Positives = 430/566 (75%), Gaps = 6/566 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+T+RQ+ GLSGFT RSES+YD FG GHSSTSISA +GMA+G D+KG +N+ +AVIGDGA
Sbjct: 162 MNTIRQSGGLSGFTNRSESDYDAFGAGHSSTSISAAVGMAIGLDIKGMRNHSIAVIGDGA 221

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G AYEAMN+AG+ +  ++I+ILNDN+QVSLPT        PVGALS+ L++LQ+N+ 
Sbjct: 222 ITGGMAYEAMNHAGFENVKNLIIILNDNQQVSLPTHYNGQQQSPVGALSATLAKLQTNKG 281

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           L ELRE  K  TK +  P+ +  AK+DEYARGMISG  STLFEELG +Y+GP+DGH+V  
Sbjct: 282 LLELRERVKAFTKTLPAPLQDATAKMDEYARGMISGVASTLFEELGCFYVGPIDGHDVSQ 341

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV IL ++K T   GPVL+HV T+KG+GY +AE+A+D+ HGV K+DP TG+QFK + +T 
Sbjct: 342 LVDILRDLKETPVQGPVLLHVRTQKGQGYKFAEEASDRMHGVGKYDPETGEQFKGAEKTP 401

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT +FA+ALIAEAE+D  V  IHAAMGGGTG+N F +RF +R +DVGIAEQHAVTFAAG
Sbjct: 402 SYTHFFADALIAEAELDSRVQGIHAAMGGGTGMNRFAKRFQSRTYDVGIAEQHAVTFAAG 461

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEGL P  AIYSSF+QR YDQV+HDV LQ LPVRFAMDRAGLVGADG TH G  DVTF
Sbjct: 462 LACEGLVPVVAIYSSFLQRGYDQVIHDVALQSLPVRFAMDRAGLVGADGATHSGFADVTF 521

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-----PPGNKGIP 414
           M CLPNMVVMAPS+EAEL + +ATA A D+ PSCFR+PRGNGIGV+L      P  KG P
Sbjct: 522 MGCLPNMVVMAPSNEAELCNALATAIAYDEGPSCFRFPRGNGIGVDLAEFGVAPNYKGRP 581

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GK  I   G+ VA L YGT V  CLAA+ +L +NG+  TV D RFCKPLD  +++  
Sbjct: 582 WVLGKASIRRSGKDVAFLAYGTVVNDCLAAAEMLAANGVSATVVDMRFCKPLDKEIVKRC 641

Query: 475 AKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           AK H V+ITVEE +IGGFGSHV+  LA +GLLD  VK RP+VLPDR+I+H +  +QLA A
Sbjct: 642 AKEHPVVITVEENAIGGFGSHVLHCLALEGLLDTNVKVRPMVLPDRFIEHATQQEQLATA 701

Query: 535 GLTPSHIAATVFNILGQTREALEIMS 560
           GL  +HI AT    LG    A  +++
Sbjct: 702 GLDAAHIFATAIKTLGLPYNAPAVLA 727


>gi|359476100|ref|XP_002282428.2| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Vitis vinifera]
 gi|296081990|emb|CBI20995.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/559 (61%), Positives = 427/559 (76%), Gaps = 5/559 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+  GLSGFT RSESEYD FG GH  +SISAGLGMAV RDLKG++  +V VIG+G 
Sbjct: 165 MHTLRERGGLSGFTSRSESEYDPFGAGHGCSSISAGLGMAVARDLKGKRERIVTVIGNGT 224

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM NAGYLD++M+VILND++  SL     DG   P+ ALSS L++LQS++  
Sbjct: 225 TMAGQVYEAMGNAGYLDTNMVVILNDSRH-SLHPKLEDGQATPINALSSTLTKLQSSKSF 283

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKGVTK+IG  MHELAAKVDEYARGM+   G+TLFEELGLYYIGPVDGHN++DL
Sbjct: 284 RKFREAAKGVTKRIGKGMHELAAKVDEYARGMVGPLGATLFEELGLYYIGPVDGHNIEDL 343

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L+ V +   TGPVL+HV+T++ +G   ++K+      +  F  +   +       + 
Sbjct: 344 ISVLQGVASLDPTGPVLVHVITKEYQGVEASQKSMISNGHLKGFYTS---ELSPYPLPRM 400

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F EAL+ EAE DKD+V +HA MG    L LF  +FP + FDVG+AEQHAVTF+AGL
Sbjct: 401 YSDCFVEALVNEAEKDKDIVVVHAGMGMEPPLQLFQEKFPYKFFDVGMAEQHAVTFSAGL 460

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC GLKPFC I S+F+QRAYDQVVHDVD Q++PVRFA+  AGLVG+DGPT CG+FD+TFM
Sbjct: 461 ACGGLKPFCIIPSTFLQRAYDQVVHDVDRQRIPVRFAITSAGLVGSDGPTRCGAFDITFM 520

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           +CLPNM+VMAPSDE EL HMVATAA +DDRP CFRYPRG   G+     N GIP+E+GKG
Sbjct: 521 SCLPNMIVMAPSDENELMHMVATAAHVDDRPICFRYPRGATAGMSNSIWN-GIPIEIGKG 579

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           ++LIEG+ VALLGYG  VQ+CL A +LL   G+R+TVADARFCKPLD  L+R L ++H  
Sbjct: 580 KVLIEGKDVALLGYGVMVQNCLKAWSLLSELGIRVTVADARFCKPLDIQLVRELCENHAF 639

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGSHV QF+A DG LDG +KWRP+ LPD YI+  SP +QLA AGLT  H
Sbjct: 640 LITVEEGSVGGFGSHVAQFIALDGKLDGRIKWRPIALPDNYIEQASPEEQLAIAGLTGHH 699

Query: 541 IAATVFNILGQTREALEIM 559
           IAATV ++LG+ REAL +M
Sbjct: 700 IAATVLSLLGRNREALLLM 718


>gi|255546609|ref|XP_002514364.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
 gi|223546820|gb|EEF48318.1| 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
          Length = 717

 Score =  706 bits (1823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/562 (62%), Positives = 420/562 (74%), Gaps = 10/562 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ +GLSGFT +SESEYD FG GH   S+SAGLGMAV RD+KG++  VV VI +G 
Sbjct: 162 MHTLRQKNGLSGFTSQSESEYDPFGAGHGCNSVSAGLGMAVARDMKGKRERVVTVISNGT 221

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM+NAGY+DS+MIVILND++  SL     +GP   + ALSS LSRLQS++  
Sbjct: 222 TMAGQVYEAMSNAGYIDSNMIVILNDSRH-SLHPKIEEGPKTSLNALSSTLSRLQSSKSF 280

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKGVTK+IG  MHELAAKVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DL
Sbjct: 281 RKFREAAKGVTKRIGRGMHELAAKVDEYARGMIGPLGSTLFEELGLYYIGPVDGHNIEDL 340

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA---ADKYHGVAKFDPATGKQFKSSAR 237
           V +L+EV +  + GPVLIHVVTE+ R     +K     +   G +  DP     F  S  
Sbjct: 341 VCVLQEVASLDSMGPVLIHVVTEENRRRDNKQKIDTLENLQEGSSNSDP-----FLYSIH 395

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
           T++Y+  F EALI EAE DKD+V +HA M   T   L   R+P R FDVG+AEQHAVTF+
Sbjct: 396 TRTYSDCFVEALIMEAEKDKDIVIVHAGMEMETAFQLIQERYPDRFFDVGMAEQHAVTFS 455

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGL+C GLKPFC I S+F+QRAYDQVVHDVD Q++PVRF +  AGLVG+DGP  CG+FD+
Sbjct: 456 AGLSCGGLKPFCIIPSTFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPMQCGAFDI 515

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           TFM+CLPNM+VMAPSDE EL  MVATA  IDD P CFRYPRG  +G +      GIP+E+
Sbjct: 516 TFMSCLPNMIVMAPSDEDELVDMVATAVQIDDHPVCFRYPRGAIVGTD-HYMRIGIPIEI 574

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG++LIEG+ VALLGYG  VQ+CL A  LL   G+ +TVADARFCKPLD  L+R L ++
Sbjct: 575 GKGKVLIEGKDVALLGYGAMVQNCLKARHLLSKLGIEVTVADARFCKPLDMKLLRQLCEN 634

Query: 478 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           H  L+TVEEGS+GGFGSHV QFL+ DG LDG VKWRP+VLPD YI+H  P +QL  AGLT
Sbjct: 635 HAFLVTVEEGSVGGFGSHVAQFLSLDGQLDGKVKWRPIVLPDTYIEHALPKEQLNLAGLT 694

Query: 538 PSHIAATVFNILGQTREALEIM 559
             HIAATV  +LG+TREAL +M
Sbjct: 695 GHHIAATVLRLLGRTREALLLM 716


>gi|224089136|ref|XP_002308644.1| predicted protein [Populus trichocarpa]
 gi|222854620|gb|EEE92167.1| predicted protein [Populus trichocarpa]
          Length = 657

 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/563 (62%), Positives = 423/563 (75%), Gaps = 11/563 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGLSGFT RSESEYD FG GH   SISAG+GMA+ RD+KG++  +V VIG+G 
Sbjct: 102 MHTLRQKDGLSGFTSRSESEYDPFGAGHGCNSISAGIGMAIARDIKGKRERIVTVIGNGT 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM NAGYLD++MIVILND++  SL     +G    + ALSS LS+LQS++  
Sbjct: 162 TMAGQVYEAMGNAGYLDTNMIVILNDSRH-SLHPKIEEGSKTSITALSSTLSKLQSSKSF 220

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LREVAKGVTK+IG  MHELAAKVDEYARGM+   GSTLFEELGLYYIGPVDGHN+ +L
Sbjct: 221 RRLREVAKGVTKRIG--MHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIGEL 278

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPY---AEKAADKYHGV-AKFDPATGKQFKSSA 236
           V +L+EV +  + GPVLIHV+TE+ +   Y   +E   ++  G+ + FD     +   S 
Sbjct: 279 VCVLQEVSSLDSMGPVLIHVITEENQCTEYKQPSEAMENQQEGILSSFD---SNELLYSM 335

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
             ++Y+  F EALI EAE DKD+V +HA M       LF  RFP R FD+G+AEQHAVTF
Sbjct: 336 HARTYSDCFVEALIMEAEKDKDIVIVHAGMEMDPSFQLFRERFPDRFFDLGMAEQHAVTF 395

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGL+C GLKPFC I S+FMQRAYDQVVHDVD Q++PVRF +  AGLVG+DGPT CG+FD
Sbjct: 396 SAGLSCGGLKPFCIIPSAFMQRAYDQVVHDVDRQRIPVRFVITSAGLVGSDGPTMCGAFD 455

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           +TFM+CLPNM+VMAPSDE EL  MVATA   DD P CFRYPRG  +G +      GIP+E
Sbjct: 456 ITFMSCLPNMIVMAPSDEDELVDMVATAVHSDDHPICFRYPRGAIVGTD-HYTRSGIPIE 514

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKG+ILIEG+ VALLGYG  VQ+CL A ALL   G+ +TVADARFCKPLD  L+R L +
Sbjct: 515 IGKGKILIEGKDVALLGYGEMVQNCLRARALLSKLGIEVTVADARFCKPLDMKLLRQLCE 574

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +H  L+TVEEGSIGGFGSHV QF+A DG LDG  KWRP+VLPD+YI+H  P +QLA AGL
Sbjct: 575 NHAFLVTVEEGSIGGFGSHVSQFIALDGQLDGRTKWRPIVLPDKYIEHALPKEQLALAGL 634

Query: 537 TPSHIAATVFNILGQTREALEIM 559
           T  HIAATV  +LG+TREAL +M
Sbjct: 635 TGHHIAATVLRLLGRTREALLLM 657


>gi|356518258|ref|XP_003527796.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 716

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/563 (60%), Positives = 422/563 (74%), Gaps = 11/563 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMR+ +GLSGFT R ESEYD FG GH   SISAGLGMAV RD+KGR+  VVAVI +  
Sbjct: 159 MTTMRRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWT 218

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQAYEAM+NAGYLDS+M+VILND++   LP    +GP   V ALSS LS+LQS++  
Sbjct: 219 TMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIE-EGPKTSVNALSSTLSKLQSSKSF 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R  RE AKGVTK+IG  MHELAAKVDEYARGM+   GSTLFEELGLYYIGPVDGHN++DL
Sbjct: 278 RRFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKA----ADKYHGVAKFDPATGKQFKSSA 236
           + +L+EV +  + GPVL+HV+T++ +G   ++K+      K  G  K D        +  
Sbjct: 338 ICVLQEVASLDSMGPVLVHVITDENQGDDNSQKSDMSDEQKNEGFVKSD-----LLDNPV 392

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
             Q+Y   F   L+AEAE DKD++ +HA +     L LF  +FP R FDVG+AEQHAVTF
Sbjct: 393 WPQTYGNCFVATLVAEAEKDKDIIVVHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTF 452

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           A+GLAC GLKPFC I SSF+QRAYDQVVHDVD Q++PVRF +  AGLVG+DGP  CG+FD
Sbjct: 453 ASGLACGGLKPFCVIPSSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLRCGAFD 512

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + FM+CLPNM+VMAPSDE EL HMVATA  I+++P CFRYPRG  +G     G+ GIP++
Sbjct: 513 INFMSCLPNMIVMAPSDELELMHMVATATRINNQPICFRYPRGALVGEGYTIGD-GIPIK 571

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G+GR+L+EG+ VA LGYG+ VQ+CL A +LL   G+ +TVADARFCKPLD  L+R L K
Sbjct: 572 IGRGRVLVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIMLLRQLCK 631

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            H  L+TVEEGSIGGFGSHV QF+A +GLLDG +KWRP+VLPDRYI+H SP +QL QAGL
Sbjct: 632 HHSFLVTVEEGSIGGFGSHVAQFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGL 691

Query: 537 TPSHIAATVFNILGQTREALEIM 559
           +  HIAAT  ++LG+TREAL  M
Sbjct: 692 SGHHIAATALSLLGRTREALLFM 714


>gi|224141855|ref|XP_002324277.1| predicted protein [Populus trichocarpa]
 gi|222865711|gb|EEF02842.1| predicted protein [Populus trichocarpa]
          Length = 612

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/562 (62%), Positives = 421/562 (74%), Gaps = 9/562 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGLSGFT RSESEYD FG GH   SISAGLGMAV RD+KG++ ++V VIG+G 
Sbjct: 56  MHTLRQKDGLSGFTSRSESEYDPFGAGHGCNSISAGLGMAVARDIKGKREHIVTVIGNGT 115

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM NAGYLDS+MIVILND++  SL     +G    + ALSS LS+LQS++  
Sbjct: 116 TMAGQVYEAMGNAGYLDSNMIVILNDSRH-SLHPKIEEGSKTSINALSSTLSKLQSSKSF 174

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LREVAKGVTK+IG  M+ELAAKVDEYARGM+   GSTLFEELGLYYIGPVDGHN++DL
Sbjct: 175 RRLREVAKGVTKRIG--MYELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDL 232

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPY---AEKAADKYHGVAKFDPATGKQFKSSAR 237
           V +L+EV   ++ GPVLIHV+TE+ +   +    E   ++  G+  F  + G    S+  
Sbjct: 233 VCVLQEVSTLESMGPVLIHVITEENQCAEHKQQTEAMGNQQEGM--FSVSAGYAVLSNMH 290

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
           TQ+Y+  F EALI EAE DKD+V +HA         LF  RFP R F VG+AEQHAVTF+
Sbjct: 291 TQTYSDCFVEALIMEAEKDKDIVVVHAGKEMEPSFQLFQERFPHRFFYVGMAEQHAVTFS 350

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGL+C GLKPFC I S+F+QRAYDQVVHDVD Q++PVRF +  AGLVG DGPT CG+FD+
Sbjct: 351 AGLSCGGLKPFCIIPSAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGPDGPTMCGAFDI 410

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           TFM+CLPNM+VMAPSDE +L  MVATAA I+DRP CFRYPRG   G +      GIP+E+
Sbjct: 411 TFMSCLPNMIVMAPSDEDQLVDMVATAAHINDRPVCFRYPRGAIAGTD-HYTRSGIPVEI 469

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG  L+EG+ VALLGYGT VQ+CL A  LL   G+ +TVADARFCKPLD  L+R L ++
Sbjct: 470 GKGLTLVEGKDVALLGYGTMVQNCLRAQTLLSKLGIEVTVADARFCKPLDMKLLRQLCEN 529

Query: 478 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           H  L+TVEEGSIGGFGSHV QF+A DG LDG  KWRP+VLPD YI+H  P +QLA AGLT
Sbjct: 530 HAFLVTVEEGSIGGFGSHVSQFIALDGQLDGRTKWRPIVLPDNYIEHALPNEQLALAGLT 589

Query: 538 PSHIAATVFNILGQTREALEIM 559
             HIAATV  +LG++REAL +M
Sbjct: 590 GHHIAATVLRLLGRSREALLLM 611


>gi|209402473|gb|ACI45959.1| putative plastid 1-deoxy-D-xylulose 5-phosphate synthase precursor
           [Pyropia yezoensis]
          Length = 660

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/576 (62%), Positives = 426/576 (73%), Gaps = 22/576 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQ+ GLSGFTKR+ESEYD FG GHSSTSISA LGMAV RDL G+ N  +AVIGDGA
Sbjct: 81  MGTMRQSGGLSGFTKRTESEYDPFGAGHSSTSISAALGMAVARDLAGKNNECIAVIGDGA 140

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP-IPPVGALSSALSRLQSNRP 119
           +T G AYEAMNNAGYL + +IV+LNDN QVSLPT T     + P GALS+  SRL S++P
Sbjct: 141 ITGGMAYEAMNNAGYLKNRVIVVLNDNGQVSLPTGTQTAAGVVPSGALSNYTSRLLSSKP 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS-GSGSTLFEELGLYYIGPVDGHNVD 178
             ++R  AK  ++     +  +AAKVDEYARG++S G G TLFEELG YYIGP+DGHN+D
Sbjct: 201 FSDVRSAAKDFSRLFPEEVQGIAAKVDEYARGIVSPGGGGTLFEELGFYYIGPIDGHNLD 260

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+ ILE V++     PV++HV TEKGRGY  AE A D+YHGVAKFD ATGKQ KS A T
Sbjct: 261 TLIPILENVRDLPGNKPVMLHVKTEKGRGYAPAEGAFDRYHGVAKFDVATGKQAKSVAPT 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  FA ALIAEAE D+ VVAI AAM GGTGLNLF  RFP RC+DVGIAEQHAVT AA
Sbjct: 321 PSYTGVFARALIAEAERDRKVVAITAAMPGGTGLNLFGERFPNRCYDVGIAEQHAVTLAA 380

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EG KP C IYS+F+QR YDQVVHDV LQ+LPVRF +DRAGLVG DG TH GSFD+ 
Sbjct: 381 GMATEGAKPVCCIYSTFLQRGYDQVVHDVALQRLPVRFILDRAGLVGNDGATHAGSFDLA 440

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV------------EL 406
           ++ CLPNM +MAPSDE EL HM+ATA A DD P+  RYPRGNG+G+            E+
Sbjct: 441 YLGCLPNMTIMAPSDEVELQHMIATAIAFDDGPTVVRYPRGNGLGLETLRSKLGYRGAEM 500

Query: 407 PPGNKGIPLEVGKGRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADAR 461
           P   + +P  +GKGRIL       G +VALL  GT +  C+ A+  LE+ G+ +TVADAR
Sbjct: 501 PARGRALP--IGKGRILRHASGNGGRKVALLSIGTRLLECVNAADALEAAGVAVTVADAR 558

Query: 462 FCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDR 520
           F KPLD  L+RSLA  HEVL+TVEEGSIGGFG HV+ FLA +GLLD G ++ RP+VLPDR
Sbjct: 559 FMKPLDTELVRSLAADHEVLVTVEEGSIGGFGDHVLHFLALEGLLDGGDLRVRPMVLPDR 618

Query: 521 YIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 556
           YIDHGS ++Q  +AGL  SHI AT   +LG++ E L
Sbjct: 619 YIDHGSQSEQYEEAGLNASHIEATALRLLGRSAEVL 654


>gi|356509936|ref|XP_003523698.1| PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Glycine max]
          Length = 716

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/559 (60%), Positives = 418/559 (74%), Gaps = 3/559 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMR+ +GLSG T R ESEYD FG GH  +SISAGLGMAV RD+KGR+  V+AVI +  
Sbjct: 159 MTTMRRKNGLSGVTSRFESEYDAFGAGHGCSSISAGLGMAVARDIKGRRERVIAVISNWT 218

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQAYEAM+NAGYLDS+M+VILND++   LP    +GP   V ALSS LS+LQS++  
Sbjct: 219 TMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIE-EGPKTFVNALSSTLSKLQSSKSF 277

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R  RE AKGVTK+IG  MHELAAKVDEYARGM+   GSTLFEELGLYYIGPVDGHN++DL
Sbjct: 278 RRFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDL 337

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+EV +  + GPVL+HV+T++ +G   ++K+ D   G             +  R Q+
Sbjct: 338 ICVLQEVASLDSMGPVLVHVITDENQGDENSQKS-DISDGQQDEGSVKSDSLDNPVRPQT 396

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L+ EAE DKD+V +HA +     L LF  +FP R FDVG+AEQHAVTFA+GL
Sbjct: 397 YGNCFVETLVVEAEKDKDIVVVHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGL 456

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC GLKPFC I SSF+QRAYDQVVHDVD Q++PVRF +  AGLVG+DGP  CG+FD+ FM
Sbjct: 457 ACGGLKPFCVIASSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDINFM 516

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           +CLPNM+VMAPSDE EL HMVATA  I+ +P CFRYPRG  +G      + GIP+++G+G
Sbjct: 517 SCLPNMIVMAPSDEVELMHMVATATRINSQPICFRYPRGALVGRGYTISD-GIPIKIGRG 575

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L+EG+ VA LGYG+ VQ+CL A +LL   G+ +TVADARFCKPLD  L+R L K H  
Sbjct: 576 RVLVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIKLLRQLCKHHSF 635

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGS V QF+A +GLLDG ++WRP+VLPDRYI+H SP +QL QAGL+  H
Sbjct: 636 LVTVEEGSIGGFGSQVAQFIAVNGLLDGRIQWRPIVLPDRYIEHASPNEQLDQAGLSGHH 695

Query: 541 IAATVFNILGQTREALEIM 559
           IAAT  ++LG+TREAL  M
Sbjct: 696 IAATALSLLGRTREALLFM 714


>gi|163797802|ref|ZP_02191748.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
 gi|159176924|gb|EDP61490.1| deoxyxylulose-5-phosphate synthase [alpha proteobacterium BAL199]
          Length = 638

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/555 (63%), Positives = 419/555 (75%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV RDLKG + NVVAVIGDGA
Sbjct: 93  IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVARDLKGERFNVVAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN  +S+         PPVGA+S+ LS++ S+R  
Sbjct: 153 MSAGMAYEAMNNAGSMDSRLIVILNDN-DMSIA--------PPVGAMSAYLSQIVSSRSY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR +AK V + +   +   A + +E+ARGM++G   TLFEELG  Y+GPVDGHN+D L
Sbjct: 204 RSLRHMAKQVAQHLPKAIERTAKRAEEFARGMVTGG--TLFEELGFLYVGPVDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ +++T   GPVL+HVVTEKGRG+P+AE +ADKYH VAKFD  TG Q K  A   S
Sbjct: 262 LPVLKNLRDTPGHGPVLLHVVTEKGRGHPFAETSADKYHAVAKFDVVTGTQAKPKANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LIAEAE D  VVAI AAM  GTGL+ F +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTNVFADSLIAEAEADDRVVAITAAMPTGTGLDRFEKRFPERLFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF AIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ ++
Sbjct: 382 AAEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDLAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP  V+MAPSDEAEL HMVATAAAIDDRPS  RYPRG G+GVELP   +G PLE+G+G
Sbjct: 442 GCLPGFVIMAPSDEAELVHMVATAAAIDDRPSAVRYPRGEGVGVELPA--RGQPLEIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VALL  G  +Q CL+A+  L + GL  TVADARF KP+D AL+R LA  H V
Sbjct: 500 RVVREGTSVALLSLGGRLQECLSAADDLAARGLSTTVADARFAKPIDTALLRRLAAEHAV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGF S V+ +LA +GLLD  +  RPLVLPDR+IDH  P  Q AQAGL  + 
Sbjct: 560 LITVEEGSIGGFSSQVLHYLATEGLLDRGLVVRPLVLPDRFIDHDKPEVQYAQAGLDAAG 619

Query: 541 IAATVFNILGQTREA 555
           I AT    LG+  EA
Sbjct: 620 IVATALAALGKDAEA 634


>gi|374341514|gb|AEZ35185.1| 1-deoxy-D-xylulose 5-phosphate synthase-I [Botryococcus braunii]
          Length = 770

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/572 (60%), Positives = 426/572 (74%), Gaps = 28/572 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGLSGFT RSESEYD FG GHSSTSISA LGMAVGRDL G+ N+ +AVIGDGA
Sbjct: 170 MHTIRQRDGLSGFTNRSESEYDAFGAGHSSTSISAALGMAVGRDLLGKDNHCIAVIGDGA 229

Query: 61  MTAGQAYEAMNNAGYLDSD-----------MIVILNDNKQVSLPTATLDGPIPPVGALSS 109
           +T G AYEA+N+AG+L S+            IVILNDN+QVSLPT        PVGAL+ 
Sbjct: 230 ITGGMAYEALNHAGFLGSEKIQGKGNNIGRTIVILNDNQQVSLPTQFNGEKQKPVGALAD 289

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
           ALS++ S    ++L   AK + KQ+  P+  +  ++++    +  G  +T F+ELG+ ++
Sbjct: 290 ALSQVAS----KQLSNSAKEIVKQLPEPLQAVGGQLEKVVSTI--GGNNTFFDELGVAHV 343

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GP+DGHNV+DLV +LE +K+ K  GPV++H++TEKG GY +AEKA+D+ HGVAK+D  +G
Sbjct: 344 GPIDGHNVEDLVNVLEWIKSQKDGGPVIVHILTEKGYGYEFAEKASDRMHGVAKYDVTSG 403

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
           KQ KSS++  SYTTYFA++LIAEAE D  V+ IHAAMGGGTG+N F +RFP R FDVGIA
Sbjct: 404 KQVKSSSKVASYTTYFADSLIAEAERDGRVIGIHAAMGGGTGMNRFAKRFPKRTFDVGIA 463

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFAAGLACEGL P CAIYSSF+QRAYDQV+HDV LQ LPVRFAMDRAGLVGADG 
Sbjct: 464 EQHAVTFAAGLACEGLIPMCAIYSSFLQRAYDQVIHDVALQNLPVRFAMDRAGLVGADGA 523

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP-- 407
           TH G  DVT+MAC+PNM+VMAPS+EAEL + VAT+ AID  PSCFR+PRGNGIGV+L   
Sbjct: 524 THSGFADVTYMACVPNMIVMAPSNEAELCNAVATSIAIDFAPSCFRFPRGNGIGVDLAEY 583

Query: 408 ---PGNKGIPLEVGKGRILIEGER------VALLGYGTAVQSCLAASALLESNGLRLTVA 458
              P  KG P E+GKG+I   G        VALLGYGT V  CLAA+ +LE+ G++ TVA
Sbjct: 584 GVQPNFKGTPWEIGKGKIRRNGSNNKPEGDVALLGYGTVVNDCLAAAEMLEAQGIKTTVA 643

Query: 459 DARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLP 518
           D RFCKPLD  LI  LAK+H V+ITVEE ++GGF SHV+ F+ + G LDG +K R L+LP
Sbjct: 644 DMRFCKPLDEELIVQLAKNHPVVITVEENTVGGFASHVLHFMTEQGFLDGKMKLRTLLLP 703

Query: 519 DRYIDHGSPADQLAQAGLTPSHIAATVFNILG 550
           DR+I+HG+   QL +A LT + I  T  N LG
Sbjct: 704 DRFIEHGTQQQQLEEALLTANDIVETAVNALG 735


>gi|414163144|ref|ZP_11419391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
 gi|410880924|gb|EKS28764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
          Length = 638

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/554 (61%), Positives = 424/554 (76%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYDCFGT HSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSISAGLGMAVARDLSGGNNNVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN ++S+         PPVGA+SS LSRL S+   
Sbjct: 152 MSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA--------PPVGAMSSYLSRLTSSNTY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K V K++   + + A + +EYARGM+SG   TLFEELG YY+GP+DGHN+D L
Sbjct: 203 RSLREIGKQVAKRLPKFVEKGAQRAEEYARGMLSGG--TLFEELGFYYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++K  GP LIHVVTEKG+GY +AE A DKYHGV KFD ATGKQ K+ A   S
Sbjct: 261 LPVLKNVRDSKV-GPTLIHVVTEKGKGYSHAETAKDKYHGVVKFDVATGKQDKAKANAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F  AL+  AE D+ ++ I AAM  GTG+++F + +P R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTSVFGNALVKLAEKDEKIIGITAAMPSGTGVDIFQKVYPERTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAGLVGADGPTH GSFD+ ++
Sbjct: 380 ATEGMKPFVAIYSTFLQRAYDQVVHDVAIQKLPVRFVIDRAGLVGADGPTHAGSFDLAYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP+MV+MA SDEAEL HMVATAAAI+DRPS FR+PRG+G+GV+LP   +G+PLE+GKG
Sbjct: 440 GCLPDMVIMAASDEAELVHMVATAAAINDRPSAFRFPRGDGVGVDLPA--EGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L  GT +   L A+ +L+S+GL  TVADARF KP+D  L+  LA+ H+V
Sbjct: 498 RIVREGSSVAILSLGTRLNESLKAADILKSHGLTTTVADARFAKPIDTDLVLQLARDHDV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFG+ V+  LA+ G LD  +K R +VLPD +ID  SPA   A+AGL    
Sbjct: 558 LITIEEGAIGGFGAQVLHTLAEAGALDKGLKVRSMVLPDVFIDQDSPAAMYAKAGLDAKG 617

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  E
Sbjct: 618 IVKRVFEALGRENE 631


>gi|299133455|ref|ZP_07026649.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
 gi|298591291|gb|EFI51492.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
          Length = 638

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/554 (61%), Positives = 424/554 (76%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYDCFGT HSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSISAGLGMAVARDLSGANNNVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN ++S+         PPVGA+SS LSRL S+   
Sbjct: 152 MSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA--------PPVGAMSSYLSRLTSSNTY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K V K++   + + A + +EYARGM+SG   TLFEELG YY+GP+DGHN+D L
Sbjct: 203 RSLREIGKQVAKRLPKFVEKGAQRAEEYARGMLSGG--TLFEELGFYYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++K  GP LIHVVT+KG+GY +AE A DKYHGV KFD ATGKQ K+ A   S
Sbjct: 261 LPVLKNVRDSKV-GPTLIHVVTQKGKGYSHAETAKDKYHGVVKFDVATGKQNKAKANAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F  AL+  AE D+ ++ I AAM  GTG+++F + +P R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTSVFGNALVKLAEKDEKIIGITAAMPSGTGIDIFQKVYPERTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAGLVGADGPTH GSFD+ ++
Sbjct: 380 ATEGMKPFVAIYSTFLQRAYDQVVHDVAIQKLPVRFVIDRAGLVGADGPTHAGSFDLAYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP+MV+MA SDEAEL HMVATAA I+DRPS FR+PRG+G+GV+LP  ++G+PLE+GKG
Sbjct: 440 GCLPDMVIMAASDEAELVHMVATAAGINDRPSAFRFPRGDGVGVDLP--SEGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L  GT +   L A+ +L+S+GL  TVADARF KP+D  L+  LA+ H+V
Sbjct: 498 RIVREGSSVAILSLGTRLNESLKAADILKSHGLTTTVADARFAKPIDTDLVLQLARDHDV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFG+ V+  LA+ G LD  +K R +VLPD +ID  SPA   A+AGL    
Sbjct: 558 LITIEEGAIGGFGAQVLHTLAEAGALDKGLKVRSMVLPDVFIDQDSPAAMYAKAGLDAKG 617

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  E
Sbjct: 618 IVKRVFEALGRENE 631


>gi|338973838|ref|ZP_08629200.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|338232565|gb|EGP07693.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
          Length = 638

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/554 (62%), Positives = 422/554 (76%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYDCFG  HSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSISAGLGMAVARDLSGGNNNVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN ++S+         PPVGA+SS LSRL S+   
Sbjct: 152 MSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA--------PPVGAMSSYLSRLTSSNTY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K V K++   + + A + +EYARGM+SG   TLFEELG YY+GP+DGHN+D L
Sbjct: 203 RSLREIGKQVAKRLPKFVEKGAQRAEEYARGMLSGG--TLFEELGFYYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++K  GP LIHVVTEKG+GY  AE +ADKYHGV KFD ATGKQ K+ A   +
Sbjct: 261 LPVLKNVRDSKV-GPTLIHVVTEKGKGYTPAEASADKYHGVVKFDVATGKQAKAQANAPA 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFGNSLVQEAEKDNKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPF AIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD+T++
Sbjct: 380 ASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLPVRFIIDRAGLVGADGPTHAGSFDITYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP MV+MA +DEAEL HMVATAAAIDDRPS  R+PRG+G+GV+LP  + G+PLE+GKG
Sbjct: 440 GCLPGMVLMAAADEAELVHMVATAAAIDDRPSAIRFPRGDGVGVDLP--SVGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VALL  GT +   L A+ +L+++GL  TVADARF KP+D  L+  LA+ H+V
Sbjct: 498 RIVREGSSVALLSLGTRLGEALKAADILKTHGLTATVADARFAKPIDTDLVLRLARDHDV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGSIGGFG+ V+  LA++G LD  +K R +VLPD +ID  SPA   A+AGL    
Sbjct: 558 LVTIEEGSIGGFGAQVLHTLAENGALDKGLKVRSMVLPDTFIDQDSPAAMYAKAGLDAKG 617

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  E
Sbjct: 618 IVTRVFEALGREGE 631


>gi|414166173|ref|ZP_11422407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
 gi|410894933|gb|EKS42719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
          Length = 638

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/554 (62%), Positives = 422/554 (76%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYDCFG  HSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSISAGLGMAVARDLSGGNNNVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN ++S+         PPVGA+SS LSRL S+   
Sbjct: 152 MSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA--------PPVGAMSSYLSRLTSSNTY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K V K++   + + A + +EYARGM+SG   TLFEELG YY+GP+DGHN+D L
Sbjct: 203 RSLREIGKQVAKRLPKFVEKGAQRAEEYARGMLSGG--TLFEELGFYYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++K  GP LIHVVTEKG+GY  AE +ADKYHGV KFD ATGKQ K+ A   +
Sbjct: 261 LPVLKNVRDSKV-GPTLIHVVTEKGKGYTPAEASADKYHGVVKFDVATGKQAKAQANAPA 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFGNSLVHEAEKDNKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPF AIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD+T++
Sbjct: 380 ASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLPVRFIIDRAGLVGADGPTHAGSFDITYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP MV+MA +DEAEL HMVATAAAIDDRPS  R+PRG+G+GV+LP  + G+PLE+GKG
Sbjct: 440 GCLPGMVLMAAADEAELVHMVATAAAIDDRPSAIRFPRGDGVGVDLP--SVGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VALL  GT +   L A+ +L+++GL  TVADARF KP+D  L+  LA+ H+V
Sbjct: 498 RIVREGSSVALLSLGTRLGEALKAADILKTHGLTATVADARFAKPIDTDLVLRLARDHDV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFG+ V+  LA++G LD  +K R +VLPD +ID  SPA   A+AGL    
Sbjct: 558 LITIEEGSIGGFGAQVLHTLAENGALDKGLKVRSMVLPDTFIDQDSPAAMYAKAGLDAKG 617

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  E
Sbjct: 618 IVTRVFEALGREGE 631


>gi|449441938|ref|XP_004138739.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
 gi|449499272|ref|XP_004160772.1| PREDICTED: 1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like [Cucumis sativus]
          Length = 717

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/564 (60%), Positives = 416/564 (73%), Gaps = 17/564 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+ + +GLSG T R ESE+D FG  H   S+SAGLGMAV RD+KG++  +V +I + +
Sbjct: 165 MSTLYKKNGLSGSTSRLESEFDPFGAAHGCNSVSAGLGMAVARDIKGKRERIVTIINNLS 224

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
              GQ YEAM+N GYLDS+MIVILND++  SL     DG    V ALSS LSRLQS++  
Sbjct: 225 TMTGQIYEAMSNVGYLDSNMIVILNDSRH-SLHPKLDDGSKTSVSALSSTLSRLQSSKSF 283

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKGVTK+IG  MHELAAKVD+YARGM+  SGSTLFEELGLYYIGPVDGHN++DL
Sbjct: 284 RKFREAAKGVTKRIGKGMHELAAKVDQYARGMMGPSGSTLFEELGLYYIGPVDGHNMEDL 343

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+EV +  + GPVL+HVVTE+     Y   A  +  G+   DP     +   +RT  
Sbjct: 344 ICVLQEVASLDSMGPVLVHVVTEENYSEGYKRVAGRQLDGLYNIDPLL---YGIDSRT-- 398

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   FAEAL+ EAE DK +V +HA M     + LF  RFP + FDVG+AEQHAVTFAAGL
Sbjct: 399 YGDCFAEALVVEAEKDKSIVTVHAGMQMEPSIQLFRERFPDKFFDVGMAEQHAVTFAAGL 458

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           +C GLKPFC I S+F+QRAYDQVVHDVD Q++PVRF +  AGLVG+DGPT CG+FD+T+M
Sbjct: 459 SCGGLKPFCVIPSAFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPTQCGAFDITYM 518

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRG-----NGIGVELPPGNKGIPL 415
           +CLPNM+VMAPSDE EL HMVATAA IDD+P CFRYPRG     N + +E      G+P+
Sbjct: 519 SCLPNMIVMAPSDENELVHMVATAARIDDQPVCFRYPRGSIVTTNNLALE------GVPI 572

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+GKGR+L EG+ +ALLGYG  VQ+CL A ALL   G+ +TVADARFCKPLD AL+R L 
Sbjct: 573 EIGKGRVLAEGKDIALLGYGAMVQNCLNARALLSKFGVEVTVADARFCKPLDIALLRQLC 632

Query: 476 KSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
            +H  LITVEEGS+GGFGSHV QF+A DG LDG VKWRP+VLPD YI+  SP  QL+ AG
Sbjct: 633 DNHAFLITVEEGSVGGFGSHVAQFIALDGRLDGRVKWRPIVLPDNYIEQASPQQQLSLAG 692

Query: 536 LTPSHIAATVFNILGQTREALEIM 559
           LT +HIAAT  ++LG+ REAL +M
Sbjct: 693 LTGNHIAATALSLLGRPREALLMM 716


>gi|407782057|ref|ZP_11129272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
 gi|407206530|gb|EKE76481.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
          Length = 639

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/552 (61%), Positives = 413/552 (74%), Gaps = 13/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV RDL+G  NNV+AVIGDG+
Sbjct: 93  IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVARDLQGGDNNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN  +S+         PP GA+S+ LSRL +++  
Sbjct: 153 MSAGMAYEAMNNAGSMDSRLIVILNDN-DMSI--------APPTGAMSNYLSRLIASKSY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE  K +  +   P+   A + +EYARGM++G   TLFEE+G  YIGPVDGH++  L
Sbjct: 204 RGLREAMKQMASRFPKPLENAARRAEEYARGMVTGG--TLFEEMGFLYIGPVDGHDISHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+ +++    GPVL+HVVTEKGRG+P+++ + +KYH V KFD  TG Q K+ A   S
Sbjct: 262 VPILKSLRDRPEAGPVLLHVVTEKGRGHPFSKDSPEKYHAVQKFDLVTGAQVKAKANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALI EAE D+ +VAI AAM GGTGL+ F  RFP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTNVFAQALIQEAEADERIVAITAAMPGGTGLDKFAERFPDRSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF AIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV ++
Sbjct: 382 ATEGMKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP+ V+MA +DEAEL HMVATAAAIDDRPS  RYPRG G GVELP   +G PLE+GKG
Sbjct: 442 GCLPDFVLMAAADEAELVHMVATAAAIDDRPSAVRYPRGEGTGVELP--ARGQPLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L YG  +Q CLAA+  L   GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 500 RVMREGTAVAILSYGARLQECLAAAEELAGYGLSATVADARFAKPLDTGLVERLARGHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGS V+Q LA  G+LD  ++ RP+VLPDR+IDH SP  Q A+AGL    
Sbjct: 560 LITIEEGSVGGFGSFVLQHLATSGMLDAGLRVRPMVLPDRFIDHDSPEKQYAEAGLNADG 619

Query: 541 IAATVFNILGQT 552
           I  T    LG++
Sbjct: 620 IVRTALAALGRS 631


>gi|209885785|ref|YP_002289642.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|337740631|ref|YP_004632359.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
 gi|386029648|ref|YP_005950423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM4]
 gi|209873981|gb|ACI93777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|336094716|gb|AEI02542.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM4]
 gi|336098295|gb|AEI06118.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
          Length = 638

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/554 (61%), Positives = 418/554 (75%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYDCFGT HSSTSISAGLGMAV RDL G   +VVAVIGDGA
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDCFGTAHSSTSISAGLGMAVARDLAGENRSVVAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN ++S+         PPVGA+SS L+RL S+   
Sbjct: 152 MSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA--------PPVGAMSSYLTRLTSSNAY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K V +++   M + A + +EYARGMISG   TLFEELG YY+GP+DGHN+D L
Sbjct: 203 RSLREIGKQVARRLPKFMEKGAQRAEEYARGMISGG--TLFEELGFYYVGPIDGHNLDQL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++K  GP L+HVVT+KG+GY +AE A DKYHGV KFD ATGKQ K+ A   S
Sbjct: 261 LPVLKNVRDSKV-GPTLVHVVTQKGKGYSHAETAKDKYHGVVKFDVATGKQNKAKANAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F   L   AE D  +V I AAM  GTG++LF +  P R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTSVFGSTLARLAETDDKIVGITAAMPSGTGIDLFQKVHPERTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF A+YS+F+QRAYDQVVHDV +Q+LPVRF +DRAGLVGADGPTH GSFD+ ++
Sbjct: 380 ATEGMKPFVALYSTFLQRAYDQVVHDVAIQRLPVRFVIDRAGLVGADGPTHAGSFDIAYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP+MV+MA +DEAEL HMVATAAAI+DRPS FR+PRG+G+G++LP   +  PLE+GKG
Sbjct: 440 GCLPDMVIMAAADEAELVHMVATAAAINDRPSAFRFPRGDGVGIDLP--TEPTPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L  GT +   L A+ +L+S+GL  TVADARF KPLD  L+  LA  HEV
Sbjct: 498 RIVREGSSVAILSLGTRLAESLKAADILKSHGLTTTVADARFAKPLDTDLVLKLAHEHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFG+HV+  LA+ G+LD  +K R +VLPD +ID  SPA   A+AGL    
Sbjct: 558 LITIEEGSIGGFGAHVLHLLAEHGVLDKGLKVRSMVLPDVFIDQDSPAAMYAKAGLDAKG 617

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  E
Sbjct: 618 IVTRVFEALGRENE 631


>gi|402850980|ref|ZP_10899163.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
 gi|402498749|gb|EJW10478.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodovulum sp. PH10]
          Length = 641

 Score =  680 bits (1754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/551 (62%), Positives = 416/551 (75%), Gaps = 12/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISAGLGMA+ RDL  + NNVV VIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGLGMAIARDLDEKANNVVCVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG +DS++IV+LNDN  +S+         PPVGALS+ L+RL + RP 
Sbjct: 154 MSAGMAYEALNNAGAMDSNLIVVLNDN-DMSIA--------PPVGALSAYLARLMTGRPY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE+ K   +++   +HE A + +E+AR MI+  G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LSLREIGKQFAQRLPRRIHEQAVRAEEFARNMIT-HGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ K  GP+L+HVVT+KG+GY  AE +ADKYHGV KFD ATG Q KS+A+  S
Sbjct: 264 LPVLKNVRDAKRRGPILVHVVTQKGKGYAPAEVSADKYHGVVKFDVATGAQVKSNAKAPS 323

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F+EAL+ EA+ D  VVAI AAM  GTG++LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 324 YTKVFSEALVQEAKKDSKVVAITAAMPAGTGVDLFGELFPDRFFDVGIAEQHAVTFAAGL 383

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV LQKLPVRF MDRAGLVGADGPTH GSFD+ F+
Sbjct: 384 ATEGYKPFVAIYSTFLQRAYDQVVHDVALQKLPVRFCMDRAGLVGADGPTHAGSFDIAFL 443

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MA +DEA+L HMVAT AA DD P+  RYPRG G GV +P   +G+PLE+GKG
Sbjct: 444 GCIPNMVLMAAADEADLVHMVATQAATDDAPTALRYPRGEGTGVTVP--LEGVPLEIGKG 501

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VAL  YGT +  CLAA+  L ++GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 502 RILREGHKVALFSYGTRLGECLAAADELAAHGLATTVADARFAKPLDIDLLTRLAREHEV 561

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGS  +Q LA+ GLLD  +K RPLVLPD YIDH +     A+AGL    
Sbjct: 562 LITVEEGSVGGFGSFCLQALAEAGLLDRGLKVRPLVLPDCYIDHDTQPAMYAKAGLDRRG 621

Query: 541 IAATVFNILGQ 551
           I A VF  LG+
Sbjct: 622 IVAKVFEALGK 632


>gi|144900827|emb|CAM77691.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 637

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/552 (61%), Positives = 410/552 (74%), Gaps = 12/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAVGRDLKG   NV+AVIGDGA
Sbjct: 92  IRTLRQGGGLSGFTKRSESAYDPFGAGHSSTSISAGLGMAVGRDLKGEDFNVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG  YEAMNNAG +DS ++VILNDN              PPVGA+S+ LSRL S+RP 
Sbjct: 152 MSAGMVYEAMNNAGSMDSRLVVILNDNDM---------SIAPPVGAMSAYLSRLLSSRPY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R  AK +   +  P+   A + +EYARG +SG G TLFEELG YY+GP+DGHN D L
Sbjct: 203 LSIRHFAKDLAAMLPPPLERAAKRAEEYARGFVSGGG-TLFEELGFYYVGPIDGHNFDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++++   PVLIHVVT+KGRGYP AE+AADKYHGV KFD  TG   K  A   S
Sbjct: 262 LPVLKNVRDSEDNKPVLIHVVTKKGRGYPPAEQAADKYHGVGKFDVVTGALAKPKANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+AEAE D  VVAI AAM  GTGL+ F  RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAQALLAEAENDDRVVAITAAMPAGTGLDKFAERFPNRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KPFCA+YS+F+QR YDQ+VHDV +QKLPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 382 ACEGFKPFCALYSTFLQRGYDQLVHDVVIQKLPVRFAIDRAGLVGADGATHAGAFDLAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP++V+M+P+DE EL H VATA A+DDRPS FRYPRG G+G++LP   +G  L +GKG
Sbjct: 442 GCLPDIVLMSPADELELMHAVATAKALDDRPSAFRYPRGEGVGLDLP--VRGEVLPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG RVALL  GT +   + A+  L + GL  TVADARF KPLD  +I  LA+ HEV
Sbjct: 500 RIIREGSRVALLSLGTRLGEAMKAADELAARGLSTTVADARFMKPLDQDMILRLAREHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGSIGGFG+ V+ FLA  G LD  +K RPLVLPD +++H +P  Q   AGL   H
Sbjct: 560 LVTIEEGSIGGFGAQVLHFLAHSGALDRGLKVRPLVLPDVFLEHEAPLKQYDLAGLNAPH 619

Query: 541 IAATVFNILGQT 552
           I A V   LGQ+
Sbjct: 620 IVACVLAALGQS 631


>gi|414172488|ref|ZP_11427399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
 gi|410894163|gb|EKS41953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
          Length = 638

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/554 (61%), Positives = 422/554 (76%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYDCFG  HSSTSISAGLGMAV RDL G + N+VAVIGDGA
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDCFGAAHSSTSISAGLGMAVARDLAGEERNIVAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN ++S+         PPVGA+S+ LSRL S+   
Sbjct: 152 MSAGMAYEAMNNAGAMDSRLIVILNDN-EMSIA--------PPVGAMSAYLSRLTSSNTY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K V K++   + + A + +EYARG +SG   TLFEELG +Y+GP+DGHN+D L
Sbjct: 203 RSLREIGKQVAKRLPKFIEKGAQRAEEYARGFLSGG--TLFEELGFFYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++K  GP LIHVVTEKG+GY  AE +ADKYHGV KFD ATGKQ K+ A   +
Sbjct: 261 LPVLKNVRDSKV-GPTLIHVVTEKGKGYTPAETSADKYHGVVKFDVATGKQAKAQANAPA 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F ++L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQH VTFAAGL
Sbjct: 320 YTKVFGQSLVQEAEKDDKIVAITAAMPSGTGVDIFGKAFPERTFDVGIAEQHGVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPF AIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD+ ++
Sbjct: 380 ASEGLKPFVAIYSTFLQRAYDQVVHDVAIQGLPVRFIIDRAGLVGADGPTHAGSFDLAYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP MV+MA +DEAEL HMVATAAAI+DRPS  R+PRG+G+GV+LP  + G+PLE+GKG
Sbjct: 440 GCLPGMVLMAAADEAELVHMVATAAAINDRPSAIRFPRGDGVGVDLP--SVGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VAL+  GT +Q CL A+ +L+++GL  TVADARF KP+D  LI  LA+ H+V
Sbjct: 498 RIVREGSSVALVSLGTRLQECLKAADILKTHGLTTTVADARFAKPIDTDLILRLARDHDV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGSIGGFG+ V+  LA++G LD  +K R +VLPD +ID  SPA   A+AGL    
Sbjct: 558 LVTIEEGSIGGFGAQVLHTLAENGALDKGLKVRSMVLPDTFIDQDSPAAMYAKAGLDAKG 617

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  E
Sbjct: 618 IVTRVFEALGREGE 631


>gi|392378578|ref|YP_004985738.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
 gi|356880060|emb|CCD01007.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
          Length = 638

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/550 (62%), Positives = 413/550 (75%), Gaps = 13/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFT RSES YD FG GHSSTSISAGLGMAV RD  GR N+V+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTNRSESAYDPFGAGHSSTSISAGLGMAVARDQLGRDNHVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG  +S +IVILNDN  +S+         PPVGA+S+ LSRL S++P 
Sbjct: 154 MSAGMAYEAMNNAGSANSKLIVILNDN-DMSIA--------PPVGAMSAYLSRLISSKPY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +AK + +Q+  P+   A + +EYARGM++G   TLFEE+G YYIGP+DGHN+D L
Sbjct: 205 LSLRHLAKDIAEQLPRPLRTAARRAEEYARGMVTGG--TLFEEMGFYYIGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++     PVLIHVVT+KG+GY  AE +ADK H VAKFD  TG Q K  +   +
Sbjct: 263 LPVLQNVRDAGDDKPVLIHVVTKKGKGYGPAEASADKLHAVAKFDVVTGAQSKPKSNAPT 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA ALIAEAE D  V+AI AAM  GTGL+LF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 323 YTRVFANALIAEAERDPGVLAITAAMPSGTGLDLFGQRFPDRCFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQVVHDV LQ+LPVRFA+DRAGLVGADG TH G+FDV ++
Sbjct: 383 ATEGFKPFCAIYSTFLQRAYDQVVHDVVLQRLPVRFALDRAGLVGADGATHAGAFDVAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP++V+MA +DE EL HMVAT+AAIDDR S  RYPRG G+G+ELP   +G  L +GKG
Sbjct: 443 GCLPDIVLMAAADELELMHMVATSAAIDDRASALRYPRGEGVGLELP--ERGEVLPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VA+L YGT +     A+A L + GL  TVADARF KPLD  L+R LA  HEV
Sbjct: 501 RILQEGTKVAILSYGTRLAEARKAAAELGARGLSTTVADARFAKPLDEELVRRLALEHEV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGS V+Q LA  GLLDG +K RP+VLPDR++DH SPA Q  +AGL   H
Sbjct: 561 LITIEEGSVGGFGSFVLQHLAMAGLLDGGLKIRPMVLPDRFLDHDSPARQYEEAGLAARH 620

Query: 541 IAATVFNILG 550
           I AT    LG
Sbjct: 621 IVATALQALG 630


>gi|389697003|ref|ZP_10184645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
 gi|388585809|gb|EIM26104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microvirga sp. WSM3557]
          Length = 635

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/552 (62%), Positives = 414/552 (75%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSESEYD FG  HSSTSISAGLGMAV RDL+G++NNV+AVIGDGA
Sbjct: 90  IRTLRQADGLSGFTKRSESEYDPFGAAHSSTSISAGLGMAVARDLEGKRNNVIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG + S +IVILNDN  +S+         PP GA+SS L+RL S    
Sbjct: 150 MSAGMAYEAMNNAGAMHSRLIVILNDN-DMSIA--------PPTGAMSSYLARLVSGGTY 200

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK + K++   +++ AAK +E+ARG  +G   T+FEELG YY+GP+DGHN+D L
Sbjct: 201 RGIRETAKQLAKKLPKFIYDKAAKAEEFARGFWTGG--TMFEELGFYYVGPIDGHNLDHL 258

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++T T GP+L+HVVT+KG+GY  AE AADKYHGV  FD  TG Q K+ A   S
Sbjct: 259 LPILKNVRDTGT-GPILVHVVTKKGKGYAPAEAAADKYHGVVTFDVVTGAQTKAKANAPS 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F E+LI EA+ D  +VA+ AAM  GTG++LF + FP R FDVGIAEQHAVTFAAG+
Sbjct: 318 YTKVFGESLIKEAQADDKIVAVTAAMPSGTGIDLFGKEFPARTFDVGIAEQHAVTFAAGM 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDV ++
Sbjct: 378 ATEGYKPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFALDRAGLVGADGATHAGSFDVAYL 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMVVMA +DEAEL HMVATAAA D  P  FRYPRG G+GV++P   KGIPL +GKG
Sbjct: 438 GCLPNMVVMAAADEAELVHMVATAAAHDSGPIAFRYPRGEGVGVDMP--EKGIPLAIGKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG R+ALL  GT +   L A+  LE+ GL  TVADARF KPLD  LI +LA+ HEV
Sbjct: 496 RVVKEGSRIALLSLGTRLAESLKAAEELEARGLSTTVADARFAKPLDEELILALARDHEV 555

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEEGSIGGFGS+V+Q LA  G LD G++K R +VLPD Y D   P    A+AGL  +
Sbjct: 556 LVTVEEGSIGGFGSYVLQLLADKGALDRGSLKVRSMVLPDIYQDQDKPERMYAKAGLDAA 615

Query: 540 HIAATVFNILGQ 551
            I   VF  LGQ
Sbjct: 616 GIVTKVFEALGQ 627


>gi|154251237|ref|YP_001412061.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvibaculum
           lavamentivorans DS-1]
 gi|154155187|gb|ABS62404.1| deoxyxylulose-5-phosphate synthase [Parvibaculum lavamentivorans
           DS-1]
          Length = 650

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/554 (61%), Positives = 411/554 (74%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR+ESEYD FG  HSSTSIS+GLGMAV RDLKG  NNVVAVIGDGA
Sbjct: 95  IRTLRQGDGLSGFTKRAESEYDPFGAAHSSTSISSGLGMAVARDLKGGTNNVVAVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +I+ILNDN  +S+         PPVGA+S+ L+RL S    
Sbjct: 155 MSAGMAYEAMNNAGSMNSRLIIILNDN-DMSIA--------PPVGAMSAYLARLLSGGAY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +R +AK + + +   + E A + +EYARGM   +G TLFEELGLYY+GP+DGHN D L
Sbjct: 206 RSMRHLAKQLAQLLPKRLEESARRAEEYARGM--ATGGTLFEELGLYYVGPIDGHNFDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++    GP+L+HVVT+KG+GY  AE A DKYHGV+KFD  TG Q K+ A   S
Sbjct: 264 LPVLKNVRDAGE-GPILVHVVTQKGKGYAPAEAAEDKYHGVSKFDVVTGTQAKAQANAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LIA AE D  +VAI AAM GGTGL+LF +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YTKVFAESLIAHAEEDDKIVAITAAMPGGTGLDLFAQRFPGRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF  IYS+F+QRAYDQVVHDV +Q+LPVRFA+DRAGLVGADGPTH GSFDVT++
Sbjct: 383 ATEGFKPFATIYSTFLQRAYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGSFDVTYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLP  VVMA +DE EL HMVATA AIDDRPS  RYPRG G+G+E+P    G PLE+GKG
Sbjct: 443 ACLPGFVVMAAADEVELKHMVATAVAIDDRPSSLRYPRGEGVGIEMP--AIGTPLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL +G +VA+L  GT +   L A+  L + GL  TV DARF KPLD  LI  LA+ HE+
Sbjct: 501 RILRQGTKVAILSLGTRLAEALKAAEQLGALGLSTTVVDARFAKPLDEDLIARLAREHEL 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV+ FLA  G LD  +K RP+ LPD +ID   P      AGL  + 
Sbjct: 561 LITVEEGSIGGFGSHVLDFLAHSGALDRGLKVRPMALPDIFIDQDKPEKMYDIAGLNAAQ 620

Query: 541 IAATVFNILGQTRE 554
           I  T  ++LGQ R+
Sbjct: 621 IVETALSVLGQERQ 634


>gi|356550766|ref|XP_003543755.1| PREDICTED: LOW QUALITY PROTEIN: probable
           1-deoxy-D-xylulose-5-phosphate synthase,
           chloroplastic-like, partial [Glycine max]
          Length = 478

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/485 (67%), Positives = 379/485 (78%), Gaps = 14/485 (2%)

Query: 79  DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPM 138
           D+I+ILNDN+QVSLPTAT+DGP PPVGALS AL+ L +N     LREVAKG+TKQIG   
Sbjct: 6   DLILILNDNEQVSLPTATIDGPAPPVGALSRALAXLNTNSKFHXLREVAKGITKQIGSRA 65

Query: 139 HELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPVLI 198
           HE A+K+D Y RGM  G+G+ LFEELGL+YIGPVD H++          K   T GP+LI
Sbjct: 66  HEFASKLDSYIRGMAGGAGACLFEELGLFYIGPVDSHDI---------XKGMPTLGPILI 116

Query: 199 HVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVDKD 258
           HV+TEKG+ Y  AE A DK HG  KFDP + KQ KS A TQ    YFAE+L AEAEVD+ 
Sbjct: 117 HVITEKGKRYHPAEVAPDKMHGAVKFDPKSRKQLKSKASTQ----YFAESLTAEAEVDEK 172

Query: 259 VVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQR 318
           +VAIHAAMGGGTGLNLF +RFP RCFDVGIAEQHAVTFAAGLA EGL  F AIYSSF+QR
Sbjct: 173 IVAIHAAMGGGTGLNLFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLNLFRAIYSSFLQR 232

Query: 319 AYDQV-VHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAEL 377
            YDQV  HDVDLQKLPVRFA+D AGLVGADGPTHCG+FD TFMACLPNMVVMAPSDE EL
Sbjct: 233 NYDQVRTHDVDLQKLPVRFALDAAGLVGADGPTHCGAFDTTFMACLPNMVVMAPSDETEL 292

Query: 378 FHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTA 437
            HM+ATAAAIDDRPSCFRYPRGNGIG  LPP NKG P+++GKGRIL EG RVAL+GYGT 
Sbjct: 293 MHMIATAAAIDDRPSCFRYPRGNGIGTILPPNNKGTPMQIGKGRILKEGSRVALVGYGTM 352

Query: 438 VQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVV 497
           +QSC+  + +LE++G+  TVADARFCKPLD  L+  LA+ HE+LITVEEGSIGGFGSHV 
Sbjct: 353 IQSCMEVAKVLEAHGISTTVADARFCKPLDGDLMTRLAREHEILITVEEGSIGGFGSHVS 412

Query: 498 QFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALE 557
            FL  +GLLDG +KW  L LPDRYI+HGS  DQ+  AGL+ +HIA T  ++     ++  
Sbjct: 413 HFLGLNGLLDGNLKWLALTLPDRYINHGSQTDQIEMAGLSSNHIAVTALSLTNVHWDSRL 472

Query: 558 IMSFK 562
           ++S +
Sbjct: 473 LLSLQ 477


>gi|374341516|gb|AEZ35186.1| 1-deoxy-D-xylulose 5-phosphate synthase-II [Botryococcus braunii]
          Length = 771

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/557 (59%), Positives = 418/557 (75%), Gaps = 8/557 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSESEYD FG GHSSTSISA LGMAVGRD K + N+ +AVIGDGA
Sbjct: 192 MPTIRQYKGLSGFTKRSESEYDAFGAGHSSTSISAALGMAVGRDFKNQNNHAIAVIGDGA 251

Query: 61  MTAGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G AYEA+N+AG++ +D MIVILNDNKQVSLPT    G   PVGAL++ L+ +Q++  
Sbjct: 252 ITGGMAYEALNHAGFMKTDKMIVILNDNKQVSLPTQYNAGDQKPVGALAATLAEIQADPN 311

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS-GSGSTLFEELGLYYIGPVDGHNVD 178
           LRE+RE  K   +Q+  P+ + A  VD+    ++S  SG+ LF++L L+YIGPVDGH+V 
Sbjct: 312 LREIRETIKNFAEQMPAPIRDFAKAVDDVGHDILSQNSGAKLFKDLKLWYIGPVDGHDVG 371

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            LV +L++VK     GPVLIH++TEKGRGY  AE + D+ HGV K+D  TGK   S++++
Sbjct: 372 LLVKVLQDVKKRPDMGPVLIHILTEKGRGYEPAETSMDRMHGVGKYDTKTGKALPSTSKS 431

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
           +SYT  +A++L AEA +D  ++A+HAAMGGGTG+N F +RF +R FDVGIAEQHAVTFAA
Sbjct: 432 KSYTNVYADSLAAEAALDPKILAVHAAMGGGTGMNRFEKRFASRTFDVGIAEQHAVTFAA 491

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA EGLKPFCAIYS+F+QRA+DQ++HDV LQ LPVRFA+DR GLVGADG TH G  DVT
Sbjct: 492 GLASEGLKPFCAIYSTFLQRAFDQIIHDVALQNLPVRFAIDRGGLVGADGATHGGFADVT 551

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL------PPGNKG 412
           +MAC+PNMVVMAPS+EAEL H VATAAA +D PSCFR+PRG+GIGV++      P   KG
Sbjct: 552 YMACVPNMVVMAPSNEAELCHAVATAAAYNDGPSCFRFPRGDGIGVDMEAEGVDPKSFKG 611

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
            P E+GKG I   G+  ALLGYGT V  CLAA+  L   G+ + V D RFCKPLD  L+ 
Sbjct: 612 QPWEIGKGVIRRLGKHAALLGYGTMVNDCLAAAEELAKKGIDVAVMDMRFCKPLDTQLVE 671

Query: 473 SLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
             AK++ ++ITVEE +IGGFGSHV   L + GLLD  VK+R ++LPDRYIDHG+ A Q  
Sbjct: 672 QAAKNYPIVITVEENAIGGFGSHVANHLVKTGLLDTAVKFRSMILPDRYIDHGTQAQQRE 731

Query: 533 QAGLTPSHIAATVFNIL 549
           +AGL  + I A V +++
Sbjct: 732 EAGLNTTTIVAKVESLM 748


>gi|357385547|ref|YP_004900271.1| 1-deoxy-d-xylulose-5-phosphate synthase [Pelagibacterium
           halotolerans B2]
 gi|351594184|gb|AEQ52521.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pelagibacterium
           halotolerans B2]
          Length = 647

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/560 (61%), Positives = 417/560 (74%), Gaps = 15/560 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR ESEYD FG GHSSTSISAGLGMAVG DLKG K NVVAVIGDGA
Sbjct: 94  IRTLRQKDGLSGFTKRGESEYDPFGAGHSSTSISAGLGMAVGSDLKGEKRNVVAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG +D+ +IVILNDN  +S+         PP GA+S+ L++L S    
Sbjct: 154 ISAGMAYEAMNNAGAMDARLIVILNDN-DMSIA--------PPTGAMSAYLAKLVSGPAY 204

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           R LR+ AK     +  P + + A K +EYARG  +G   TLFEELG YY+GP+DGHN+D 
Sbjct: 205 RGLRDAAKQFVDSVMPPFIKDKARKTEEYARGFWTGG--TLFEELGFYYVGPIDGHNLDH 262

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L  V++ +T GP+LIHVVT+KG+GY  AE++ADKYHGV+KF+  TG Q K+ +   
Sbjct: 263 LLPVLRNVRDAET-GPILIHVVTQKGKGYAPAEESADKYHGVSKFNVITGAQAKAPSNAP 321

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT+ FA++LIAEA+ D+ +VAI AAM GGTG++ F + FP R FDVGIAEQHAVTFAAG
Sbjct: 322 SYTSVFADSLIAEAQKDEAIVAITAAMPGGTGIDKFSKHFPERSFDVGIAEQHAVTFAAG 381

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKPFC IYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADGPTH GSFD+T+
Sbjct: 382 LATEGLKPFCTIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGYVGADGPTHAGSFDITY 441

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP+MVVMA  DEAEL HMVATAAA DD P  FRYPRG G+GVE+P    G+PL +GK
Sbjct: 442 LATLPSMVVMAAGDEAELRHMVATAAAYDDGPIAFRYPRGEGVGVEMP--EAGVPLTIGK 499

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG  +ALL  GT +  C+AA+  L + G   TVADARF KPLD  L+  LA+ H 
Sbjct: 500 GRVLKEGTTIALLSLGTRLAECMAAAETLGTYGFSTTVADARFAKPLDEELLARLAREHA 559

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLITVEEG+IGGFGSHV   +AQ GLLD  +K+RPL++PDRYI+     D  AQAGL  S
Sbjct: 560 VLITVEEGAIGGFGSHVATRMAQLGLLDNGLKFRPLLMPDRYIEQAGQGDMYAQAGLDRS 619

Query: 540 HIAATVFNILGQTREALEIM 559
            I AT    LG    A +++
Sbjct: 620 GIVATALTALGDETNAAQVL 639


>gi|209963899|ref|YP_002296814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
           SW]
 gi|226801550|sp|B6IRB5.1|DXS_RHOCS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|209957365|gb|ACI98001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum centenum
           SW]
          Length = 642

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/550 (61%), Positives = 415/550 (75%), Gaps = 13/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ESEYD FG GHSSTSISA LGMAVGRD  G KN+V+ VIGDG+
Sbjct: 94  IRTLRMGGGLSGFTKRAESEYDPFGAGHSSTSISAALGMAVGRDQLGHKNHVICVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG ++S MIVILNDN  +S+         PPVGA+S  LSRL S+R  
Sbjct: 154 ISAGMAYEAMNNAGAMNSRMIVILNDN-DMSIA--------PPVGAMSGYLSRLISSRQY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K V +++  P+ E A + +EYARG ++G   TLFEE+G YY+GP+DGHN+D L
Sbjct: 205 RGLRELGKQVAERLPRPLQEAARRAEEYARGFVTGG--TLFEEMGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE +++ + TGPVLIH VT+KGRGY  AE++ADK H V+KFD  TG Q K+ A   S
Sbjct: 263 LPVLENIRDDQGTGPVLIHAVTQKGRGYGPAERSADKLHAVSKFDVITGAQAKAKANAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EAE D  VVAI AAM  GTGL+LF +RFP R +DVGIAEQHAVTFAAGL
Sbjct: 323 YTRVFADSLIQEAEADSRVVAITAAMPSGTGLDLFEKRFPDRTYDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVG+DG TH GSFDV ++
Sbjct: 383 AAEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGSDGCTHAGSFDVAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+MA +DEAEL HMVATAAA D  P   RYPRG G+G+E+P   +G  LE+GKG
Sbjct: 443 GCVPNIVIMAAADEAELKHMVATAAAYDHGPIAVRYPRGEGVGLEMP--ERGQVLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  GT ++  L A+  L + GL  TVADARF KP+D ALIR LA+ HEV
Sbjct: 501 RIVKEGTKVAILSLGTRLKEALLAAEDLNARGLSTTVADARFAKPIDEALIRRLAQDHEV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGS+V+ FLAQ GLLD  +K RP+VLPD + D  +PA Q  +AGL   H
Sbjct: 561 LITVEEGSIGGFGSYVLHFLAQSGLLDQGLKVRPMVLPDIFQDQDAPAKQYDEAGLNARH 620

Query: 541 IAATVFNILG 550
           I  T    LG
Sbjct: 621 IVETALKALG 630


>gi|408537469|gb|AFU75320.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Aquilaria sinensis]
          Length = 712

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/561 (59%), Positives = 414/561 (73%), Gaps = 9/561 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           ++++ +T  L  F  +SE+EYD FG GH  +SISAGLGMA  RD+KG++  VV VI +  
Sbjct: 158 LNSLTKTSNLPSFASQSENEYDPFGAGHGCSSISAGLGMAAARDIKGKRERVVTVINNDT 217

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM+NAGYLD +M+VILND++  SL     +GP   +  LSS LS++QS++  
Sbjct: 218 TMAGQVYEAMSNAGYLDCNMVVILNDSRH-SLHPKIEEGPKTSINMLSSTLSKIQSSKSF 276

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R  REVAKGVTK+IG  MHE AAKVDEYARGMI   GSTLFEELGLYYIGPVDGHN++DL
Sbjct: 277 RTFREVAKGVTKRIGRGMHEWAAKVDEYARGMIGPQGSTLFEELGLYYIGPVDGHNIEDL 336

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L+EV +  +TGPVL+HV+TE+       +K   K  G+ +    +   F S+   ++
Sbjct: 337 VGVLQEVASLDSTGPVLVHVITEENEASNIDQK---KTQGMQQEGSTSSCSFLSTDHCRT 393

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F EAL+ EA  DKD+V +HA MG    L+L+  RFP + FDVG+AEQHAVTFAAGL
Sbjct: 394 YSDCFVEALLMEAVRDKDIVVVHAGMGLEPSLHLYQERFPDKFFDVGMAEQHAVTFAAGL 453

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           +  GLKPFC I S+F+QRAYDQVVHDVD Q +PVRF +  AGLVG+DGP   G+FD+TFM
Sbjct: 454 SRGGLKPFCIIPSTFLQRAYDQVVHDVDRQMIPVRFVVTGAGLVGSDGPLQSGAFDITFM 513

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPGNKGIPLEVG 418
           +CLPNM+VMAPS E EL  MVATAA IDD+P CFRYPRG  +G E   P    GIPL++G
Sbjct: 514 SCLPNMIVMAPSSEEELARMVATAAQIDDQPICFRYPRGAVVGTECYFP---SGIPLQIG 570

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           +G++LIEG+ VALLGYG  VQ+CL A  LL   G+ +TVADARFCKPLD  L+R L ++H
Sbjct: 571 EGKLLIEGKDVALLGYGAMVQNCLKAQILLSKLGVDVTVADARFCKPLDIELLRKLCENH 630

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           ++LITVEEGSIGGFGSHV QFLA DGLLDG +KWRP+VLPD+YI+   P +QL  AGLT 
Sbjct: 631 DILITVEEGSIGGFGSHVAQFLALDGLLDGRLKWRPIVLPDKYIEQALPGEQLEDAGLTG 690

Query: 539 SHIAATVFNILGQTREALEIM 559
            HIAAT   +LG+ REAL++M
Sbjct: 691 HHIAATALTLLGRNREALQLM 711


>gi|239831304|ref|ZP_04679633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           LMG 3301]
 gi|444308786|ref|ZP_21144428.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           M86]
 gi|239823571|gb|EEQ95139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           LMG 3301]
 gi|443487834|gb|ELT50594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum intermedium
           M86]
          Length = 638

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/556 (62%), Positives = 410/556 (73%), Gaps = 16/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQT GLSGFTKRSESEYD FG  HSSTSISAGLGMAV  DL G K NV+AVIGDG+
Sbjct: 93  IRTLRQTGGLSGFTKRSESEYDPFGAAHSSTSISAGLGMAVASDLSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGKTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V K++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAKKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++T+  GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG+Q K  A   S
Sbjct: 262 LPILKNVRDTQE-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGQQSKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VAI AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAITAAMPSGTGLDLFGEVFPQRTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGFKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP  VVMA SDEAEL HMV TAA  ++ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 SALPGFVVMAASDEAELRHMVRTAAEYNEGPISFRYPRGDGVGVDLP--ERGQLLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAADELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGF SHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFASHVLQFLATDGLLDRGLKVRALTLPDSYQDHGKPDAMYAEAGLDRAG 618

Query: 541 IAATVFNILGQTREAL 556
           I   VF  LG  REA+
Sbjct: 619 IVQAVFAALG--REAI 632


>gi|153007892|ref|YP_001369107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
           49188]
 gi|166198634|sp|A6WWC4.1|DXS_OCHA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|151559780|gb|ABS13278.1| deoxyxylulose-5-phosphate synthase [Ochrobactrum anthropi ATCC
           49188]
          Length = 638

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/556 (62%), Positives = 409/556 (73%), Gaps = 16/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQT GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  DL G K NV+AVIGDG+
Sbjct: 93  IRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSISAGLGMAVASDLSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGKTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V K++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAKKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPILKNVRDTQE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQSKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VAI AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDRIVAITAAMPSGTGLDLFGEVFPQRTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGQLLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAADELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGF SHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFASHVLQFLATDGLLDRGLKVRALTLPDTYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNILGQTREAL 556
           I   VF  LG  REA+
Sbjct: 619 IVHAVFAALG--REAV 632


>gi|209886012|ref|YP_002289869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|337740417|ref|YP_004632145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|386029434|ref|YP_005950209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM4]
 gi|209874208|gb|ACI94004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oligotropha
           carboxidovorans OM5]
 gi|336094502|gb|AEI02328.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM4]
 gi|336098081|gb|AEI05904.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Oligotropha
           carboxidovorans OM5]
          Length = 636

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/551 (60%), Positives = 413/551 (74%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGF KR+ESEYD FGT HSSTSISAGLGMAV RDL+G  NNV+AVIGDG+
Sbjct: 92  IRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSISAGLGMAVARDLQGGNNNVIAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG L+S +IVILNDN  +S+         PPVGA+S+ L+RL S++  
Sbjct: 152 MSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA--------PPVGAMSAYLARLISSQTY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE+ K + +++    H+   + +EYARGM++G    LFEELGL+Y+GP+DGHN+D L
Sbjct: 203 GTAREILKTIAQRMPKFFHDRTLRAEEYARGMVAGG--MLFEELGLFYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V+++ T GPVLIHVVT+KG+GY  AE++ D+YHGV KFD ATGKQFK+ + T S
Sbjct: 261 LPVLTNVRDSGT-GPVLIHVVTKKGKGYAPAEESDDRYHGVVKFDVATGKQFKAKSNTPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F  +L+ EA+ D  +VAI  AM GGTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTSVFGNSLVKEAQKDDKIVAITGAMPGGTGIDIFGKAFPDRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADGPTH GSFD T++
Sbjct: 380 AAEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGSFDNTYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN ++MA  DEA+L HM+AT   ID+ PS  RYPRG G+GVELP  + G+PLE+GKG
Sbjct: 440 GCLPNFIIMAAGDEADLVHMIATQTGIDNAPSALRYPRGEGLGVELP--DVGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG +VAL  +GT +  CL A+  LES GL  TVADARF KPLD  L+  LA+SHEV
Sbjct: 498 RVLREGSKVALFSFGTRLGECLKAADDLESRGLSTTVADARFLKPLDTDLLLKLARSHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFG+HV+Q LA  G LD  +K R +VLPD +ID  SPA    QAGL    
Sbjct: 558 LITIEEGSVGGFGTHVIQALADHGALDKGLKIRSMVLPDIFIDQDSPAKMYEQAGLDAKA 617

Query: 541 IAATVFNILGQ 551
           I A V   LG 
Sbjct: 618 IVAKVLETLGN 628


>gi|316932492|ref|YP_004107474.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           DX-1]
 gi|315600206|gb|ADU42741.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           DX-1]
          Length = 641

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/555 (60%), Positives = 414/555 (74%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES++D FG GHSSTSISAGLGMAV  +L G+KNNV+AVIGDG+
Sbjct: 94  IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASELAGKKNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 ISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE  K + K +   + + AA+ +EY+RG + G G TLFEELG YY+GPVDGHN+D L
Sbjct: 205 RSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGGG-TLFEELGFYYVGPVDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++  T GP LIHVVT+KG+GY  AE AADKYH V KFD ATG Q K+ +   S
Sbjct: 264 LPILQNVRDADT-GPFLIHVVTQKGKGYGPAEAAADKYHAVVKFDIATGAQSKAKSNAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQ+VHDV +QKLPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AIDDRPS  RYPRG G GVE+P  + G+PLE+GKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRGVEMP--DVGVPLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G +VALL +GT +     A+  L + GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 501 RVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDIELVLKLARDHEV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV+Q LA+ G+LDG VK R LVLPD ++DH +P    A+AGL    
Sbjct: 561 LITVEEGSIGGFGSHVMQALAEHGMLDGQVKMRSLVLPDVFMDHDNPTAMYARAGLDAKA 620

Query: 541 IAATVFNILGQTREA 555
           I   VF++LG   +A
Sbjct: 621 IVKKVFDVLGNDAKA 635


>gi|404317422|ref|ZP_10965355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ochrobactrum anthropi
           CTS-325]
          Length = 638

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/556 (62%), Positives = 409/556 (73%), Gaps = 16/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQT GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  DL G K NV+AVIGDG+
Sbjct: 93  IRTLRQTGGLSGFTKRTESEYDPFGAAHSSTSISAGLGMAVASDLSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGKTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V K++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAKKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPILKNVRDTQE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQSKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VAI AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDRIVAITAAMPSGTGLDLFGEVFPQRTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  ++ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYNEGPISFRYPRGDGVGVDLP--ERGQLLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAADELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGF SHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFASHVLQFLATDGLLDRGLKVRALTLPDTYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNILGQTREAL 556
           I   VF  LG  REA+
Sbjct: 619 IVHAVFAALG--REAV 632


>gi|392377749|ref|YP_004984908.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
 gi|356879230|emb|CCD00134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum brasilense
           Sp245]
          Length = 643

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/551 (61%), Positives = 407/551 (73%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFT+R+ES YD FG  HSST++SAGLGMAV RD  GR+N+VVAV+GDGA
Sbjct: 97  IRTLRTGGGLSGFTRRTESVYDPFGAAHSSTAMSAGLGMAVARDRLGRRNHVVAVVGDGA 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNN G  DS +IV+LNDN              PPVGALS+ LSRL S++P 
Sbjct: 157 MSAGMAYEAMNNIGSGDSRVIVVLNDNNM---------SIAPPVGALSAYLSRLISSKPF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR  A+ +   +  P+   A + +EYARGM++G   TLFEE+G YYIGP+DGHN+D L
Sbjct: 208 LTLRHFAEDLAGHMPRPLRTAARRAEEYARGMVTGG--TLFEEMGFYYIGPIDGHNLDHL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++     PVLIHVVT+KG+GY  AE +ADK H VAKFD  TG Q K  +   +
Sbjct: 266 LPVLQNVRDAGDDKPVLIHVVTKKGKGYGPAEASADKLHAVAKFDVVTGAQSKPKSNAPT 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA ALIAEAE D  V+AI AAM  GTGL+LF +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 326 YTRVFANALIAEAERDPGVLAITAAMPSGTGLDLFGQRFPDRCFDVGIAEQHAVTFAAGL 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQVVHDV LQ+LPVRFA+DRAGLVGADG TH G+FDV ++
Sbjct: 386 ATEGFKPFCAIYSTFLQRAYDQVVHDVVLQRLPVRFALDRAGLVGADGATHAGAFDVAYL 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP++V+MA +DE EL HMVAT+AAIDDR S  RYPRG G+G+ELP   +G  L +GKG
Sbjct: 446 GCLPDIVLMAAADELELMHMVATSAAIDDRVSALRYPRGEGVGLELP--ERGEVLPIGKG 503

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VA+L YGT +     A+A L + GL  TVADARF KPLD  L+R LA  HEV
Sbjct: 504 RILQEGTKVAILSYGTRLAEARKAAAELGARGLSTTVADARFAKPLDEDLVRRLALEHEV 563

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGS V+Q LA  GLLDG +K RP+VLPDR++DH SPA Q  +AGL   H
Sbjct: 564 LITIEEGSVGGFGSFVLQHLAMAGLLDGGLKIRPMVLPDRFLDHDSPARQYEEAGLAARH 623

Query: 541 IAATVFNILGQ 551
           I AT    LG 
Sbjct: 624 IVATALQALGN 634


>gi|307941538|ref|ZP_07656893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
 gi|307775146|gb|EFO34352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseibium sp. TrichSKD4]
          Length = 639

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/551 (62%), Positives = 401/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR ESEYD FG  HSSTSISAGLGMAV RDLKG  NNV+AVIGDGA
Sbjct: 94  IRTLRQKDGLSGFTKRDESEYDPFGAAHSSTSISAGLGMAVARDLKGGDNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LDS +IVILNDN  +S+         PPVGA+S+ L++L S    
Sbjct: 154 MSAGMAYEAMNNAGSLDSRLIVILNDN-DMSIA--------PPVGAMSAYLAKLVSGPTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + LR  AK   K    P+ E AAK +EYARG  +G   TLFEE+G YY+GPVDGHN++ L
Sbjct: 205 QSLRGAAKNFAKNFPKPLQEKAAKAEEYARGFWTGG--TLFEEMGFYYVGPVDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++T   GPVLIH VT+KG+GY  AE A DKYHGVAKFD  TGKQ K  A   S
Sbjct: 263 LPILKNVRDTHN-GPVLIHAVTQKGKGYAPAEGAKDKYHGVAKFDVITGKQAKPKANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA +LI EAE D  +V + AAM  GTGLNLF   FP R FDVGIAEQH VTFAAGL
Sbjct: 322 YTNVFATSLIKEAEHDDKIVTVTAAMPDGTGLNLFQDAFPDRTFDVGIAEQHGVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  ++
Sbjct: 382 ATEGYKPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFPIDRAGLVGADGPTHAGSFDTAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPN VVMA +DE EL HMVATAAA DD P  FRYPRG G+G+++P   +G  LE+GKG
Sbjct: 442 ACLPNFVVMAAADEVELRHMVATAAAYDDGPISFRYPRGEGVGLDMP--ERGSVLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG +VAL  +GT +  CL A+  L+  GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 500 VVRKEGSKVALFSFGTRMAECLKAAEELDIAGLSTTVADARFAKPLDVDLLLRLAREHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGS+GGFGSHV+  LAQ G LD  +K R L LPDRYID G P     +AGL+ + 
Sbjct: 560 LVTVEEGSVGGFGSHVLGMLAQHGALDKGLKIRTLCLPDRYIDQGKPDGMYEEAGLSAAG 619

Query: 541 IAATVFNILGQ 551
           I  TVF  LG+
Sbjct: 620 IMKTVFEALGR 630


>gi|83312003|ref|YP_422267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetospirillum
           magneticum AMB-1]
 gi|118595587|sp|Q2W367.1|DXS_MAGMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82946844|dbj|BAE51708.1| Deoxyxylulose-5-phosphate synthase [Magnetospirillum magneticum
           AMB-1]
          Length = 644

 Score =  664 bits (1713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/551 (61%), Positives = 405/551 (73%), Gaps = 12/551 (2%)

Query: 6   QTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQ 65
           Q  GLSGFT+RSESEYD FG GHSSTSISA LGMAV RDLKG  NNV+AVIGDGAM+AGQ
Sbjct: 104 QGGGLSGFTRRSESEYDPFGAGHSSTSISAALGMAVARDLKGATNNVIAVIGDGAMSAGQ 163

Query: 66  AYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELRE 125
           AYEAMNNAG   S +IVILNDN  +S+         PPVGALS+ LSRL S+     LR 
Sbjct: 164 AYEAMNNAGAAGSRLIVILNDN-DMSI--------APPVGALSAHLSRLLSSPSYHSLRH 214

Query: 126 VAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILE 185
           + K +   +   +     + +EYARGM+SG G TLFEELG YY+GP+DGHN + L+ +L+
Sbjct: 215 LVKDLAHLLPPSLERAVGRAEEYARGMVSGGG-TLFEELGFYYVGPIDGHNFEHLLPVLK 273

Query: 186 EVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYF 245
            ++++  T PV++HVVT+KGRGYP AE AADKYHGV +FD  TG+  K  A   SYT+ F
Sbjct: 274 NLRDSDDTKPVMLHVVTKKGRGYPPAEAAADKYHGVGRFDVLTGQLEKPKANAPSYTSVF 333

Query: 246 AEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGL 305
           A+ALIAEAEVD  VVAI AAM GGTGL+ F  RFP R FDVGIAEQHAVTFA GLA EG 
Sbjct: 334 AKALIAEAEVDDRVVAITAAMPGGTGLDKFGDRFPARTFDVGIAEQHAVTFAGGLATEGF 393

Query: 306 KPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPN 365
           KPFCAIYSSF+QRAYDQV HDV LQKLPVRFA+DRAGLVGADG TH GS+D+ F+ CLP+
Sbjct: 394 KPFCAIYSSFLQRAYDQVQHDVVLQKLPVRFAIDRAGLVGADGATHAGSYDMAFLGCLPD 453

Query: 366 MVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIE 425
           +V+M PSDEA+L H VATA +IDDRPS FRYPRG G+G+EL    +G  + +GKGR++ E
Sbjct: 454 IVIMCPSDEADLMHAVATAVSIDDRPSAFRYPRGEGVGIEL--SERGSVMPIGKGRVVRE 511

Query: 426 GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVE 485
           G RVA+L  GT +   L A+  L + GL  TV DARF KPLD  LI  LA+ HEVLITVE
Sbjct: 512 GNRVAILSLGTRLAEALKAADELAARGLAPTVVDARFMKPLDEELILRLAREHEVLITVE 571

Query: 486 EGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 545
           EGS+GGFGSHV+  LA  G LD  +K RPL LPD +++H +PA Q  + GL  S I ATV
Sbjct: 572 EGSVGGFGSHVLHLLASKGALDNGLKVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATV 631

Query: 546 FNILGQTREAL 556
              LG+ R  +
Sbjct: 632 LATLGEARSVV 642


>gi|163842716|ref|YP_001627120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
 gi|189027769|sp|B0CKC0.1|DXS_BRUSI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|163673439|gb|ABY37550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis ATCC 23445]
          Length = 643

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGATGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|39934029|ref|NP_946305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           CGA009]
 gi|192289449|ref|YP_001990054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           TIE-1]
 gi|81563891|sp|Q6NB76.1|DXS_RHOPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229836076|sp|B3QFY7.1|DXS_RHOPT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|39647877|emb|CAE26396.1| 1-D-deoxyxylulose 5-phosphate synthase [Rhodopseudomonas palustris
           CGA009]
 gi|192283198|gb|ACE99578.1| deoxyxylulose-5-phosphate synthase [Rhodopseudomonas palustris
           TIE-1]
          Length = 641

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/551 (60%), Positives = 412/551 (74%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES++D FG GHSSTSISAGLGMAV  +L G+KNNV+AVIGDG+
Sbjct: 94  IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASELAGKKNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 ISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE  K + K +   + + AA+ +EY+RG + G G TLFEELG YY+GPVDGHN+D L
Sbjct: 205 RSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGGG-TLFEELGFYYVGPVDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++  T GP LIHVVT+KG+GY  AE AADKYH V KFD ATG Q K+ +   S
Sbjct: 264 LPILQNVRDADT-GPFLIHVVTQKGKGYGPAEAAADKYHAVVKFDIATGAQAKAKSNAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EA+ D  +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQ+VHDV +QKLPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ATEGYKPFCAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AIDDRPS  RYPRG G GVE+P    GIPLE+GKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAIDDRPSAVRYPRGEGRGVEMP--EVGIPLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G +VALL +GT +     A+  L + GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 501 RVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGSIGGFGSHV+Q LA+ G+LDG VK R LVLPD ++DH +P    A+AGL    
Sbjct: 561 LLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKA 620

Query: 541 IAATVFNILGQ 551
           I   VF++LG+
Sbjct: 621 IVKKVFDVLGK 631


>gi|90422661|ref|YP_531031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB18]
 gi|118595613|sp|Q21A74.1|DXS_RHOPB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|90104675|gb|ABD86712.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB18]
          Length = 641

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/551 (60%), Positives = 408/551 (74%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDG+
Sbjct: 94  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGKNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 ISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE  K + K +   + + AA+ +EY+RG + G G TLFEELG YY+GPVDGHN+D L
Sbjct: 205 RTLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGGG-TLFEELGFYYVGPVDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++  T GP LIHVVT+KG+GY  AE A+DKYH V KFD ATG Q K+ +   S
Sbjct: 264 LPILQNVRDADT-GPFLIHVVTQKGKGYGPAEAASDKYHAVVKFDIATGAQAKAKSNAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EA+ D  +V I AAM  GTG+++F + FPTR FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPTRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD  F+
Sbjct: 383 AAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT  AI+DRPS  RYPRG G GVE+P    GI LE+GKG
Sbjct: 443 GCLPNMVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGIALEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG ++ALL +GT +  C  A+  L + GL  T+ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RIVREGNKIALLSFGTRLAECEKAADELATLGLSTTIADARFMKPLDVELVLKLARDHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGSIGGFGSHV+Q LA+ G+LDG V+ R LVLPD ++DH +P    A+AGL    
Sbjct: 561 LLTIEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPTAMYARAGLDAKG 620

Query: 541 IAATVFNILGQ 551
           I   VF  LG+
Sbjct: 621 IVKKVFEALGK 631


>gi|414163311|ref|ZP_11419558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
 gi|410881091|gb|EKS28931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia felis ATCC 53690]
          Length = 638

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/551 (60%), Positives = 409/551 (74%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGF KR+ESEYD FGT HSSTSISAGLGMAV RDL+   NNV+AVIGDG+
Sbjct: 94  IRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSISAGLGMAVARDLQQGNNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG L+S +IVILNDN  +S+         PPVGA+S+ L+RL S+   
Sbjct: 154 MSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA--------PPVGAMSAYLARLISSETY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE+ K +  ++     +   + +EYARGM++G    LFEELG++Y+GP+DGHN+D L
Sbjct: 205 GTAREILKNIAHRMPKFFQDRTLRAEEYARGMVAGG--MLFEELGMFYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++  T GPVLIHVVT+KG+GY  AE++ DKYHGV KFD ATGKQFK+ +   S
Sbjct: 263 LPVLTNVRDNGT-GPVLIHVVTKKGKGYAPAEESDDKYHGVVKFDVATGKQFKTKSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F  +L  EA+ D  +VAI  AM GGTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFGNSLTKEAQKDDKIVAITGAMPGGTGVDIFAKSFPERTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADGPTH GSFD T++
Sbjct: 382 ATEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGSFDNTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN+++MA  DEA+L HMVAT  AID+ PS  RYPRG G+G+ELP  + G+PLE+GKG
Sbjct: 442 GCLPNLIIMAAGDEADLVHMVATQVAIDNAPSALRYPRGEGLGLELP--DVGVPLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L +G +VAL  +GT +  CL A+  LE+ GL  TVADARF KPLD  L   LA+SHEV
Sbjct: 500 RVLRQGTKVALFSFGTRLGECLKAADELEAQGLSTTVADARFLKPLDIELTLKLARSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFG+HV+Q LA  G LD  +K R +VLPD +ID  SPA    QAGL    
Sbjct: 560 LITVEEGSIGGFGTHVIQALADHGALDKGLKIRSMVLPDIFIDQDSPAKMYEQAGLDAKA 619

Query: 541 IAATVFNILGQ 551
           I A VF  LG+
Sbjct: 620 IVAKVFEALGK 630


>gi|389876824|ref|YP_006370389.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
 gi|388527608|gb|AFK52805.1| deoxyxylulose-5-phosphate synthase [Tistrella mobilis KA081020-065]
          Length = 645

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/553 (60%), Positives = 402/553 (72%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNN-VVAVIGDG 59
           + T+RQ DGLSGFTKR ESEYD FG  HSSTSISAGLGMAV   LKG +   V+AVIGDG
Sbjct: 94  IRTLRQKDGLSGFTKRDESEYDPFGAAHSSTSISAGLGMAVASRLKGEEERRVIAVIGDG 153

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG +   +IVILNDN              PP GA+S+ LSRL S+R 
Sbjct: 154 AMSAGMAYEAMNNAGAMPDRLIVILNDNDM---------SIAPPTGAMSAYLSRLISSRS 204

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LR++AK + +    P+ + A + +E+ARG+++G   TLFEELG YY+GP+DGHN+D 
Sbjct: 205 YRSLRDIAKQMARVFPKPLEQAARRAEEFARGLVTGG--TLFEELGFYYVGPIDGHNLDH 262

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L  V++    GPVLIH+VT+KG+GYP AEKAADKYHGVAKFD  TG Q K +A   
Sbjct: 263 LLPVLLNVRDADQDGPVLIHIVTQKGKGYPPAEKAADKYHGVAKFDVVTGAQVKPAAGAP 322

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  +A+ALIAEAE D  V+A+ AAM  GTGL+ F RRFP R FDVGIAEQHAVTFAAG
Sbjct: 323 SYTNVYADALIAEAEHDPRVLAVTAAMPTGTGLDRFGRRFPDRVFDVGIAEQHAVTFAAG 382

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KPF  IYS+F+QRAYDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD+T+
Sbjct: 383 LAAEGMKPFATIYSTFLQRAYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHMGSFDLTY 442

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + CLP+ VVMAP+DEAEL HMVATAA IDDRPS  RYPRG G+GV LP   +G PLE+G+
Sbjct: 443 LCCLPDFVVMAPADEAELMHMVATAAQIDDRPSAVRYPRGEGLGVPLP--ARGTPLEIGR 500

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG +VA+L  G+ V   L A   L + G   TVADARF KP+D  L+R LA  HE
Sbjct: 501 GRILREGTKVAILALGSRVADALKAGEELTARGYSTTVADARFAKPIDADLVRRLASEHE 560

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EE +IGGF S V Q L    L++  +K RP++LPD +IDH SP DQ+  AGL   
Sbjct: 561 VLITIEENAIGGFASQVTQLLCDGALIERGLKLRPMMLPDLFIDHASPRDQVEMAGLGVQ 620

Query: 540 HIAATVFNILGQT 552
            I A     LG  
Sbjct: 621 AIVAKALEALGHN 633


>gi|218197541|gb|EEC79968.1| hypothetical protein OsI_21592 [Oryza sativa Indica Group]
          Length = 611

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/570 (57%), Positives = 410/570 (71%), Gaps = 23/570 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT++Q  GLSGFT R ESEYD FG GH   S+SAGLGMAV RDL GRKN +V VI +  
Sbjct: 53  FHTIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWT 112

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM +AG+LDS+M+VILND++   LP A     +  + ALSSALS++QS++  
Sbjct: 113 TMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGF 171

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKG++K  G  MHE AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL
Sbjct: 172 RKFREAAKGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDL 231

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRG---------YPYAEKAADKYHGVAKFDPATGKQ 231
           + +L+EV    +TGPVL+HV+TE  +           P  E   D    + KF       
Sbjct: 232 ICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDILKF------- 284

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
              +  +++Y   F E+LIAEAE DK +V +H  MG    + LF  RFP R FD+GIAEQ
Sbjct: 285 -LENGLSRTYNDCFVESLIAEAENDKRIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQ 343

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTF+AGLAC GLKPFC I S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+
Sbjct: 344 HAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTN 403

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPG 409
            G FD+TFM+CLPNM+VM+PS+E EL  MVATAA ++DRP CFRYP+G  +G    L  G
Sbjct: 404 SGPFDITFMSCLPNMIVMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYG 463

Query: 410 NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHA 469
           N   PLE+GKG IL EG+ +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  
Sbjct: 464 N---PLEIGKGEILAEGKEIAFLGYGEVVQRCLIARSLLFNFGIQATVANARFCKPLDID 520

Query: 470 LIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           LIR L + H+ LITVEEG++GGFGSHV QF++ DGLLDG +KWRP+VLPDRYI+H S  +
Sbjct: 521 LIRMLCQQHDFLITVEEGTVGGFGSHVSQFISLDGLLDGKIKWRPIVLPDRYIEHASLTE 580

Query: 530 QLAQAGLTPSHIAATVFNILGQTREALEIM 559
           QL  AGLT  HIAAT   +LG+ R+AL +M
Sbjct: 581 QLDMAGLTAHHIAATALTLLGRHRDALLLM 610


>gi|407777509|ref|ZP_11124778.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
           pht-3B]
 gi|407300758|gb|EKF19881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor pacificus
           pht-3B]
          Length = 640

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/554 (60%), Positives = 411/554 (74%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GL GFTKR+ESEYD FGT HSSTSISAGLGMAV RDL+G K NV+AVIGDGA
Sbjct: 96  IRTLRQEGGLYGFTKRAESEYDPFGTAHSSTSISAGLGMAVARDLRGEKRNVIAVIGDGA 155

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 156 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPQGAMSAYLARLASGRTY 206

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + +RE+ K +T  +G  +     +  E+ARG ++G   TLFEE+G ++IGP+DGHN+  L
Sbjct: 207 QGVRELGKKLTSYLGKGVDRAVTRAVEHARGYVTGG--TLFEEMGFFHIGPIDGHNLKHL 264

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L+ V++    GPVLIHVVT+KG+GYP AE A DKYHGV KFD  TG Q K+ A   S
Sbjct: 265 VPVLKNVRDNGD-GPVLIHVVTKKGKGYPPAEAAEDKYHGVNKFDVITGAQAKAPANAPS 323

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++L+ EA  D+ +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAG+
Sbjct: 324 YTKVFAQSLVQEARADERIVAVTAAMPSGTGLDLFGTEFPERTFDVGIAEQHAVTFAAGM 383

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGL+PF AIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAG VGADGPTHCG+FD+T++
Sbjct: 384 ATEGLRPFAAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGFVGADGPTHCGAFDITYL 443

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNM VMA +DEAEL HMV TAA  D  P  FRYPRG+G+GV++P   +G  L +G+G
Sbjct: 444 ASLPNMAVMAAADEAELRHMVRTAAEYDAGPIAFRYPRGDGVGVDMP--ERGEVLAIGRG 501

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG +VALL  G  +Q CL A+  L++ GL  TVADARF KPLD ALIR LA+ HEV
Sbjct: 502 RVLREGSKVALLSLGGRLQDCLRAAEELDAAGLSTTVADARFAKPLDEALIRHLAREHEV 561

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+ FLA +GLL+  VK RP+ +PDR+I+H  P   +  AGL  + 
Sbjct: 562 LITIEEGSIGGFGSHVLNFLAHEGLLESGVKVRPMTMPDRFINHAKPERMIEDAGLDAAA 621

Query: 541 IAATVFNILGQTRE 554
           I  TVF  LGQ  E
Sbjct: 622 IVRTVFAALGQHAE 635


>gi|374330008|ref|YP_005080192.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
 gi|359342796|gb|AEV36170.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. FO-BEG1]
          Length = 633

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/554 (61%), Positives = 407/554 (73%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 88  IRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVARDLAGGDNNVIAVIGDGA 147

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG L+S +IVILNDN  +S+         PPVGALS++L+RL S +  
Sbjct: 148 MSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA--------PPVGALSASLARLVSGKTY 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE AK V   +  P+ E AA+ +E+AR   +G   TLFEELG YY+GPVDGHN+D L
Sbjct: 199 TGFREAAKQVASALPKPLQEKAAQAEEFARSFFTGG--TLFEELGFYYVGPVDGHNLDHL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ K  GP+L+HVVT+KG+GY  AE A++KYH VAKFD  TG+Q K      S
Sbjct: 257 LPVLKNVRDAKE-GPILVHVVTQKGKGYLPAENASNKYHAVAKFDVVTGEQSKPKPNAPS 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA ALI EA  D+ +V I AAM  GTGL++F +  PTR FDVGIAEQHAVTFAAG+
Sbjct: 316 YTRVFANALIEEANKDEKIVGITAAMPDGTGLDVFEKVHPTRMFDVGIAEQHAVTFAAGM 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +QKLPVRF +DRAGLVGADG TH GSFD  F+
Sbjct: 376 ASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFPIDRAGLVGADGATHAGSFDTAFL 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           +CLP MVVM+P DEAEL HMV+TAAA D+ P  FRYPRG GIG++LP    G PLE+GKG
Sbjct: 436 SCLPGMVVMSPGDEAELVHMVSTAAAYDEGPIAFRYPRGEGIGIDLP--EVGTPLEIGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG RVAL+  G  +Q  L A+  L++ GL  TVADARF KPLD  +I  LAK H+V
Sbjct: 494 RIVKEGSRVALVSLGGRLQEALKAADTLDAAGLSTTVADARFAKPLDTDMIGRLAKEHDV 553

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGS V+QFL+ +GLLDG++K R ++LPD + DH  P      AGL  S 
Sbjct: 554 LITIEEGSIGGFGSQVLQFLSDNGLLDGSLKVRSMILPDAFQDHAKPEAMYKDAGLDASG 613

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  +
Sbjct: 614 IVHRVFETLGKAED 627


>gi|91978764|ref|YP_571423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB5]
 gi|123748724|sp|Q130G7.1|DXS_RHOPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91685220|gb|ABE41522.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisB5]
          Length = 638

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/555 (59%), Positives = 408/555 (73%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G  NNV+AVIGDG+
Sbjct: 91  IRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGNNNVIAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 151 ISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA--------PPVGAMSAYLSRLYSGKTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE  K + K +   + + AA+ +EY+RG + G G TLFEELG YY+GP+DGHN+D L
Sbjct: 202 RSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGGG-TLFEELGFYYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++ +T GP LIHVVT+KG+GY  AE A+DKYH V KFD ATG Q K+ +   S
Sbjct: 261 LPILQNVRDAET-GPFLIHVVTQKGKGYAPAEAASDKYHAVVKFDIATGTQAKAKSNAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EA  D  +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YQNVFGQSLVKEAAKDDKIVGITAAMPSGTGIDIFEKAFPARTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 380 ATEGYKPFCAIYSTFLQRAYDQVVHDVALQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT  AI+DRPS  RYPRG G GVE+P  + G+PLE+GKG
Sbjct: 440 GCLPNMVIMAASDEAELVHMVATQVAINDRPSALRYPRGEGRGVEMP--DVGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G +VALL +GT +  C  A+  L + GL  TVADARF KPLD  L+  LA  HE+
Sbjct: 498 RVIRQGNKVALLSFGTRLAECEKAAEELAALGLSTTVADARFMKPLDVDLVLKLANEHEI 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFG+HV+Q LA+ G LDG VK R +VLPD ++DH +P    A AGL    
Sbjct: 558 LITIEEGSIGGFGTHVMQTLAEHGKLDGEVKMRAMVLPDVFLDHDTPTAMYANAGLDAKA 617

Query: 541 IAATVFNILGQTREA 555
           I   VF  LG+  +A
Sbjct: 618 IVKKVFEALGKEHKA 632


>gi|254471675|ref|ZP_05085076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
 gi|211958877|gb|EEA94076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudovibrio sp. JE062]
          Length = 633

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/554 (61%), Positives = 407/554 (73%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 88  IRTLRQDGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVARDLAGGDNNVIAVIGDGA 147

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG L+S +IVILNDN  +S+         PPVGALS++L+RL S +  
Sbjct: 148 MSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA--------PPVGALSASLARLVSGKTY 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE AK V   +  P+ E AA+ +E+AR   +G   TLFEELG YY+GPVDGHN+D L
Sbjct: 199 TGFREAAKQVASALPKPLQEKAAQAEEFARSFFTGG--TLFEELGFYYVGPVDGHNLDHL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ K  GP+L+HVVT+KG+GY  AE A++KYH VAKFD  TG+Q K      S
Sbjct: 257 LPVLKNVRDAKE-GPILVHVVTQKGKGYLPAENASNKYHAVAKFDVVTGEQSKPKPNAPS 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA ALI EA  D+ +V I AAM  GTGL++F +  PTR FDVGIAEQHAVTFAAG+
Sbjct: 316 YTRVFANALIEEANKDEKIVGITAAMPDGTGLDVFEKVHPTRMFDVGIAEQHAVTFAAGM 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +QKLPVRF +DRAGLVGADG TH GSFD  F+
Sbjct: 376 ASEGYKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFPIDRAGLVGADGATHAGSFDTAFL 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           +CLP MVVM+P DEAEL HMV+TAAA D+ P  FRYPRG GIG++LP    G PLE+GKG
Sbjct: 436 SCLPGMVVMSPGDEAELVHMVSTAAAYDEGPIAFRYPRGEGIGIDLP--EIGTPLEIGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG RVAL+  G  +Q  L A+  L++ GL  TVADARF KPLD  +I  LAK H+V
Sbjct: 494 RIVKEGSRVALVSLGGRLQEALKAADTLDAAGLSTTVADARFAKPLDTDMIGRLAKEHDV 553

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGS V+QFL+ +GLLDG++K R ++LPD + DH  P      AGL  S 
Sbjct: 554 LITIEEGSIGGFGSQVLQFLSDNGLLDGSLKVRSMILPDAFQDHAKPEAMYKDAGLDASG 613

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  +
Sbjct: 614 IVHRVFETLGKAED 627


>gi|365881074|ref|ZP_09420405.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 375]
 gi|365290782|emb|CCD92936.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 375]
          Length = 641

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/551 (59%), Positives = 411/551 (74%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + + +   +   A++V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE AADKYH VAKFD ATG Q K+     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAKAKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  VV I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKVVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 AAEGYKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT  AIDDRPS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 443 GCLPNMVIMAASDEAELVHMVATQVAIDDRPSSVRYPRGEGRGVEMP--EVGVPLPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G++VALL +GT +  C  A+  L ++GL  ++ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLAREHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R +VLPD + DH +PA   A+AGL    
Sbjct: 561 LITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRTMVLPDEFQDHDTPAAMYARAGLDAKG 620

Query: 541 IAATVFNILGQ 551
           I   VF  LG+
Sbjct: 621 IVRKVFEALGK 631


>gi|407975808|ref|ZP_11156711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
           C115]
 gi|407428669|gb|EKF41350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitratireductor indicus
           C115]
          Length = 638

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/554 (60%), Positives = 413/554 (74%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GL GFTKR+ESEYD FGT HSSTSISAGLGMAV RDLKG + NV+AVIGDGA
Sbjct: 94  IRTLRQEGGLYGFTKRTESEYDPFGTAHSSTSISAGLGMAVARDLKGERRNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 LSAGMAYEAMNNAGSLDARLIVILNDN-DMSIA--------PPQGAMSAYLARLASGRAY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + +RE+ K +T  +G  +     +  E+ARG ++G   TLFEE+G ++IGP+DGHN+  L
Sbjct: 205 QGVRELGKKLTAALGKGVDRAVTRAVEHARGYVTGG--TLFEEMGFFHIGPIDGHNLRHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L+ V++    GPVLIHVVT+KG+GY  AE A DKYHGV +FD  TG Q K+ A   S
Sbjct: 263 VPVLKNVRD-HGNGPVLIHVVTKKGKGYAPAEAAEDKYHGVNRFDVITGAQAKAPANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LIAEA  D+ VVA+ AAM  GTGL+LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTKVFAQSLIAEAREDERVVAVTAAMPSGTGLDLFGKEFPERTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPF AIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAG VGADGPTHCG+FDVT++
Sbjct: 382 ATEGLKPFVAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGYVGADGPTHCGAFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HMV TA   D  P  FRYPRG+G+GV++P   +G  L +G+G
Sbjct: 442 ASLPNMVVMAAADEAELRHMVRTACVHDAGPIAFRYPRGDGVGVDMP--ERGDVLPIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG +VALL +G+ +Q CL A+  LE+ GL  TVADARF KPLD  L+R LA+ HEV
Sbjct: 500 RVLREGGKVALLSFGSRLQDCLKAAEELEAAGLSTTVADARFAKPLDEELVRRLARDHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV+ FLA +GLL+  +K RPL +PDR++DH  P   +  AGL  + 
Sbjct: 560 LLTVEEGSIGGFGSHVLNFLAHEGLLETGLKVRPLAMPDRFVDHAKPERMVEDAGLDAAS 619

Query: 541 IAATVFNILGQTRE 554
           I  TVF  LGQ  E
Sbjct: 620 IVRTVFTALGQRSE 633


>gi|288961626|ref|YP_003451936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
 gi|288913906|dbj|BAI75392.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum sp. B510]
          Length = 637

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/555 (60%), Positives = 404/555 (72%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES++D FG GHSSTSISAGLGMAV   +KG + NV+AVIGDGA
Sbjct: 93  IRTLRMGGGLSGFTKRSESDHDPFGAGHSSTSISAGLGMAVASKMKGERRNVIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    S +IVILNDN              PPVGA+S+ LSRL S++P 
Sbjct: 153 MSAGMAYEAMNNAASTKSRLIVILNDNDM---------SIAPPVGAMSAYLSRLISSKPY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +AK +  Q+  P+   A + +EYARGM++G   TLFEELG YYIGP+DGHN+D L
Sbjct: 204 LSLRHLAKEIADQLPRPLRNAARRAEEYARGMVTGG--TLFEELGFYYIGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++     PVLIHVVT+KG+GY  AE++ADK H VAKFD  TG Q K  +   +
Sbjct: 262 LPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEESADKLHAVAKFDVVTGTQSKPKSNAPT 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LIAEA  D  +V I AAM  GTGL+LF  RFP RCFDVGIAEQHAVTFAAG+
Sbjct: 322 YTRVFAQSLIAEAAADPSIVGITAAMPSGTGLDLFGERFPDRCFDVGIAEQHAVTFAAGM 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQV+HDV LQ LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 382 ATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHLPVRFALDRAGLVGADGATHAGSFDTAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP++V+MA +DE EL HMVAT AAIDDR S  RYPRG G+G+ELP   +G  L +GKG
Sbjct: 442 GCLPDIVLMAAADELELMHMVATQAAIDDRASALRYPRGEGVGLELP--ERGGLLPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG ++A+L YGT +     A+A L + GL  T+ADARF KPLD  L+R LA  HEV
Sbjct: 500 RILQEGTKIAILSYGTRLGEARRAAAELAARGLSTTLADARFAKPLDEDLVRRLALEHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGS V+QFLA  GLLDG +K RP+VLPD Y+DH SPA Q   AGLT  H
Sbjct: 560 LITIEEGSVGGFGSFVLQFLAMAGLLDGGLKIRPMVLPDLYLDHDSPAKQYEAAGLTAQH 619

Query: 541 IAATVFNILGQTREA 555
           I  T    LG    A
Sbjct: 620 IVRTALQALGMESAA 634


>gi|367474105|ref|ZP_09473631.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 285]
 gi|365273603|emb|CCD86099.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 285]
          Length = 641

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 411/551 (74%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + + +   +   A++V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE AADKYH VAKFD ATG Q K+     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAKAKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ASEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT  AIDD+PS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 443 GCLPNMVIMAASDEAELVHMVATQVAIDDKPSAVRYPRGEGRGVEMP--EVGVPLPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G+++ALL +GT +  C  A+  L ++GL  ++ADARF KPLD  LI  LA+ H++
Sbjct: 501 RMIRQGKQIALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELIMKLAREHDI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+QFLA  G+LDG +K R +VLPD + DH +PA   A+AGL    
Sbjct: 561 LITIEEGSIGGFGSHVMQFLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKG 620

Query: 541 IAATVFNILGQ 551
           I   VF  LG+
Sbjct: 621 IVRKVFEALGK 631


>gi|398821070|ref|ZP_10579560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
 gi|398228267|gb|EJN14399.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. YR681]
          Length = 642

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/556 (59%), Positives = 414/556 (74%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLAGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + K++   +   A +V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQINKRLPKILANRANRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE +ADKYH V KFD ATG Q KS     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ATEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AI+DRPS  RYPRG G G+E+P  + G+PLEVGKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAINDRPSSLRYPRGEGRGIEMP--DVGVPLEVGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G ++ALL +GT +  C  A+  L ++GL  ++ADARF KPLD  L+  LA+ H+V
Sbjct: 501 RMIRQGNKIALLSFGTRLAECEKAADELAAHGLSTSIADARFMKPLDTELVLKLARDHDV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LITVEEGSIGGFGSHV Q+L   G+LD G VK+R +VLPD + DH +PA   A+AGL   
Sbjct: 561 LITVEEGSIGGFGSHVAQYLTDQGVLDTGMVKFRSMVLPDVFQDHDTPAAMYARAGLDAK 620

Query: 540 HIAATVFNILGQTREA 555
            I A VF  LG+  +A
Sbjct: 621 GIVAKVFEALGKDVKA 636


>gi|365899110|ref|ZP_09437031.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3843]
 gi|365420205|emb|CCE09573.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3843]
          Length = 618

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/555 (58%), Positives = 411/555 (74%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 71  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLSGGTNNVIAVIGDGA 130

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 131 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 181

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + + +   +   A++V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 182 RTLREAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 240

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GYP AE +ADKYH VAKFD ATG Q K+      
Sbjct: 241 LPVLKNVRDMET-GPILVHVVTQKGKGYPPAEASADKYHAVAKFDVATGTQAKAKPNAPQ 299

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ +AE D  ++ I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 300 YQNVFGQSLVKQAEKDDKIIGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFAAGL 359

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 360 AAEGYKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 419

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT   I+DRPS  RYPRG G GVE+P    G+PLEVGKG
Sbjct: 420 GCLPNMVIMAASDEAELVHMVATQVVINDRPSAVRYPRGEGRGVEMP--EVGVPLEVGKG 477

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G+++ALL +GT +  C  A+  L + GL  ++ADARF KPLD  L+  LA+ HE+
Sbjct: 478 RMIRQGKQIALLSFGTRLAECEKAADELAAQGLSTSIADARFMKPLDEELVLKLARDHEI 537

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGSHV+Q+LA  G+LDG +K R +VLPD ++DH +PA    +AGL    
Sbjct: 538 LITIEEGSVGGFGSHVMQYLADQGMLDGGLKMRAMVLPDEFLDHDTPAAMYGRAGLDAKG 597

Query: 541 IAATVFNILGQTREA 555
           I   VF  LG+  +A
Sbjct: 598 IVRKVFEALGKDYKA 612


>gi|337270073|ref|YP_004614128.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
           WSM2075]
 gi|336030383|gb|AEH90034.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium opportunistum
           WSM2075]
          Length = 637

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/555 (61%), Positives = 406/555 (73%), Gaps = 14/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMA  RDL G +NNV+AVIGDGA
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAAARDLSGGRNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 154 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGKAY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+  K +T  +G        +  E+ARG ++G   TLFEELG Y+IGP+DGHN++ L
Sbjct: 205 AGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGG--TLFEELGFYHIGPIDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+ A   +
Sbjct: 263 IPVLKNVRDNGE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQAKAPANAPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI EA  D  +VA+ AAM GGTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTKVFAESLIQEAREDDRIVAVTAAMPGGTGLDLFGEVFPARTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADG THCG+FD TF+
Sbjct: 382 ATEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAA+ DD P  FRYPRGNG+GV++P   +G  LE+GKG
Sbjct: 442 ASLPGFVVMAAADEAELRHMVRTAASYDDGPIAFRYPRGNGVGVDMP--ERGSVLELGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CL A+  L + GL  TVADARF KPLD  LIR LA+SHEV
Sbjct: 500 RIIREGTKVALLSFGTRLQDCLVAAEELGAAGLSTTVADARFAKPLDQDLIRRLARSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG++GGF SHV+QFLA +GLL+  +K RPLVLPD + DH  P    A AGL    
Sbjct: 560 LVTVEEGAVGGFASHVLQFLAHEGLLESGLKVRPLVLPDTFTDHAKPEKMYADAGLDADG 619

Query: 541 IAATVFNILGQTREA 555
           I  TVF  LG T  A
Sbjct: 620 IVRTVFTALGHTAHA 634


>gi|110633092|ref|YP_673300.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
 gi|118595588|sp|Q11KE0.1|DXS_MESSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|110284076|gb|ABG62135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chelativorans sp. BNC1]
          Length = 650

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/555 (60%), Positives = 411/555 (74%), Gaps = 14/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSESEYD FG  HSSTSISAGLGMAV R+L G + +V+AVIGDGA
Sbjct: 107 IRTLRQEDGLSGFTKRSESEYDPFGAAHSSTSISAGLGMAVARELSGGQRHVIAVIGDGA 166

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 167 LSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSTYLARLASGRAY 217

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +R+V K +T  +G        +  E+ARG ++G   TLFEE+G ++IGP+DGH+++ L
Sbjct: 218 RGIRDVGKKLTSHLGKSFDRAITRAVEHARGFVTGG--TLFEEMGFFHIGPIDGHDLEAL 275

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V++  T GPVLIHVVT+KG+GYP AE AADKYHGVAKFD  TG Q KS A   S
Sbjct: 276 VPVLRNVRDNGT-GPVLIHVVTQKGKGYPPAEAAADKYHGVAKFDVITGAQAKSPAGAPS 334

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+ EA  DK +VAI AAM  GTGL+LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 335 YTKVFAQALVQEAREDKRIVAITAAMPSGTGLDLFEKEFPDRSFDVGIAEQHAVTFAAGL 394

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG +PF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAG VGADG THCG+FDV ++
Sbjct: 395 ATEGYRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGFVGADGATHCGAFDVAYL 454

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HMV TAA  D+ P  FRYPRG G GV LP   +G  L++GKG
Sbjct: 455 ATLPNMVVMAAADEAELKHMVRTAADHDEGPIAFRYPRGEGTGVPLP--QRGEILKIGKG 512

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG ++ALL  GT +  C+ A+  LE+ GL  TVADARF KPLD  LIR LA+ HEV
Sbjct: 513 RIVREGSKIALLSLGTRLADCMIAAEELEAAGLSTTVADARFAKPLDADLIRRLAREHEV 572

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFG+HV+ FLA +GLL+  +K RPLV+PD ++D   P    A+AGL  + 
Sbjct: 573 LVTVEEGSIGGFGAHVLHFLAHEGLLENGLKVRPLVMPDIFMDQAKPEKMYAKAGLDAAG 632

Query: 541 IAATVFNILGQTREA 555
           I  TVF  LGQ  +A
Sbjct: 633 IVKTVFAALGQAEQA 647


>gi|148253965|ref|YP_001238550.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
 gi|259645379|sp|A5EEQ0.1|DXS_BRASB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|146406138|gb|ABQ34644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 641

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 411/551 (74%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + + +   +   A++V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GYP AE +ADKYH V KFD ATG Q K+     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYPPAEASADKYHAVVKFDVATGTQAKAKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  VV I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKVVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 AAEGFKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT  AI+DRPS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 443 GCLPNMVIMAASDEAELVHMVATQVAINDRPSSVRYPRGEGRGVEMP--EVGVPLPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G++VALL +GT +  C  A+  L ++GL  ++ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLAREHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R +VLPD + DH +PA   A+AGL    
Sbjct: 561 LITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKG 620

Query: 541 IAATVFNILGQ 551
           I   VF  LG+
Sbjct: 621 IVRKVFEALGK 631


>gi|146339201|ref|YP_001204249.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. ORS
           278]
 gi|259645380|sp|A4YQ36.1|DXS_BRASO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|146192007|emb|CAL76012.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. ORS 278]
          Length = 641

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 412/551 (74%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRAESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + + +   +   A++V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE AADKYH VAKFD ATG Q K+     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAKAKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D+ +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDEKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 AAEGYKPFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT  AIDDRPS  RYPRG G GVE+P    G+ L +GKG
Sbjct: 443 GCLPNMVIMAASDEAELVHMVATQVAIDDRPSSVRYPRGEGRGVEMP--EVGVALPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G++VALL +GT +  C  A+  L ++GL  ++ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLARDHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R +VLPD + DH +PA   A+AGL    
Sbjct: 561 LITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKG 620

Query: 541 IAATVFNILGQ 551
           I   VF +LG+
Sbjct: 621 IVRKVFEVLGK 631


>gi|374293689|ref|YP_005040712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azospirillum lipoferum 4B]
 gi|357427092|emb|CBS90030.1| 1-deoxy-D-xylulose 5-phosphate synthase [Azospirillum lipoferum 4B]
          Length = 637

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/550 (61%), Positives = 404/550 (73%), Gaps = 13/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSESEYD FG GHSSTSISAGLGMAV   +KG + NV+AVIGDG+
Sbjct: 93  IRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVASRIKGEQRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    S +IVILNDN              PPVGA+S+ LSRL S++P 
Sbjct: 153 MSAGMAYEAMNNAASTKSRLIVILNDNDM---------SIAPPVGAMSAYLSRLISSKPY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +AK +  Q+  P+   A + +EYARGM++G   TLFEELG YYIGP+DGHN+D L
Sbjct: 204 LSLRHLAKEIADQLPRPLRNAARRAEEYARGMVTGG--TLFEELGFYYIGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++     PVLIHVVT+KG+GY  AE++ADK H VAKFD  TG Q K  +   +
Sbjct: 262 LPVLQNVRDADDDKPVLIHVVTKKGKGYGPAEESADKLHAVAKFDVVTGTQSKPKSNAPT 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LIAEA  D  +V I AAM  GTGL+LF  RFP RCFDVGIAEQHAVTFAAG+
Sbjct: 322 YTRVFAQSLIAEAAADPSIVGITAAMPSGTGLDLFGERFPDRCFDVGIAEQHAVTFAAGM 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQV+HDV LQ LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 382 ATEGFKPFCAIYSTFLQRAYDQVIHDVVLQHLPVRFALDRAGLVGADGATHAGSFDTAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP++V+MA +DE EL HMVAT AAIDDR S  RYPRG G+G+ELP  ++G  L +GKG
Sbjct: 442 GCLPDIVLMAAADELELMHMVATQAAIDDRASALRYPRGEGVGLELP--DRGSILPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG ++A+L YGT +     A+A L + GL  T+ADARF KPLD  L+R LA  HEV
Sbjct: 500 RILQEGTKIAILSYGTRLGEGRRAAAELAARGLSTTLADARFAKPLDEDLVRRLALEHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGS V+QFLA  GLLDG +K RP+VLPD Y+DH SPA Q   AGLT  H
Sbjct: 560 LITIEEGSVGGFGSFVLQFLATAGLLDGGLKIRPMVLPDLYLDHDSPAKQYEAAGLTAQH 619

Query: 541 IAATVFNILG 550
           I  T    LG
Sbjct: 620 IVRTALQALG 629


>gi|27377762|ref|NP_769291.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 110]
 gi|41016964|sp|Q89RW1.1|DXS_BRAJA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|27350907|dbj|BAC47916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 110]
          Length = 661

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/552 (59%), Positives = 410/552 (74%), Gaps = 14/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 113 IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 172

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 173 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 223

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + K++   +   A +V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 224 RTLREAAKQINKRLPKIIANRANRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 282

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +  GP+L+HVVT+KG+GY  AE +ADKYH V KFD ATG Q K+     +
Sbjct: 283 LPVLKNVRDMEE-GPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKAKPNAPA 341

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EA+ D+ +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 342 YQNVFGQSLVKEAQKDEKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 401

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 402 ASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYL 461

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AIDDRPS  RYPRG G G+E+P    GIPLE+GKG
Sbjct: 462 GCLPNMVIMAAADEAELVHMVATQVAIDDRPSSLRYPRGEGRGIEMP--EVGIPLEIGKG 519

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G ++ALL +GT +  C  A+  L ++GL  T+ADARF KPLD  L+  LA+ HE+
Sbjct: 520 RMIRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHEI 579

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EEGS+GGFGSHV QFL   G LD G VK+R +VLPD + DH +PA   A+AGL   
Sbjct: 580 LITIEEGSVGGFGSHVAQFLTDQGALDSGMVKFRTMVLPDVFQDHDTPAAMYARAGLDAK 639

Query: 540 HIAATVFNILGQ 551
            I A VF  LG+
Sbjct: 640 GIVAKVFEALGK 651


>gi|297807177|ref|XP_002871472.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317309|gb|EFH47731.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 701

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/557 (58%), Positives = 411/557 (73%), Gaps = 23/557 (4%)

Query: 5   RQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAG 64
           RQ +G SG T + ESEYD FGTGH   S SAGLG+AV RD+KG+++ VVAVI +  +TAG
Sbjct: 167 RQKNGTSGVTSQLESEYDSFGTGHGCNSTSAGLGLAVARDIKGKRDRVVAVIDNATITAG 226

Query: 65  QAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELR 124
           QAYEAM+NAGYLDS+MIVILND++  SL     +G    + ALSS +S++QS++  R+ R
Sbjct: 227 QAYEAMSNAGYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKIFRKFR 285

Query: 125 EVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL 184
           E+AK +TK+IG  M+E AAKVDEYARGM+  +GSTLFEELGLYYIGPVDGHN++DLV +L
Sbjct: 286 ELAKSMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVL 345

Query: 185 EEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTY 244
            EV +  + GPVL+HV+TE+ R                  D  TGK      R ++Y+  
Sbjct: 346 REVSSLDSMGPVLVHVITEENR------------------DAETGKNIMVKDR-RTYSDC 386

Query: 245 FAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEG 304
           F EAL+ EAE D+D+V +HA M     L  F  RFP R F+VG+AEQHAVTF+AGL+  G
Sbjct: 387 FVEALVMEAEKDRDIVVVHAGMEMDASLITFQERFPDRFFNVGMAEQHAVTFSAGLSSGG 446

Query: 305 LKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLP 364
           LKPFC I S+F+QRAYDQVVHDVD Q+  VRF +  AGLVG+DGP  CG+FD+ FM+ LP
Sbjct: 447 LKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLP 506

Query: 365 NMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE-LPPGNKGIPLEVGKGRIL 423
           NM+ MAP+DE EL +MVATAA + DRP CFR+PRG+ +    L P   G+P+E+G+GR+L
Sbjct: 507 NMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNRNYLVP--TGLPIEIGRGRVL 564

Query: 424 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 483
           +EG+ VALLGYG  VQ+CL A +LL   GL +TVADARFCKPLD  L+R L ++H++LIT
Sbjct: 565 VEGQDVALLGYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKILIT 624

Query: 484 VEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 543
           VEEG +GGFGSHV QF+A DG LDG +KWRP+VLPD YI+  SP +QLA AGLT  HIAA
Sbjct: 625 VEEGCVGGFGSHVAQFIALDGQLDGNIKWRPIVLPDGYIEEASPREQLALAGLTGHHIAA 684

Query: 544 TVFNILGQTREALEIMS 560
           T  ++LG+TREAL +MS
Sbjct: 685 TALSLLGRTREALLLMS 701


>gi|242094640|ref|XP_002437810.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
 gi|241916033|gb|EER89177.1| hypothetical protein SORBIDRAFT_10g002960 [Sorghum bicolor]
          Length = 722

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/569 (58%), Positives = 411/569 (72%), Gaps = 21/569 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT++Q +GLSGFT R ESEYD FG GH   S+SAGLGMAV RD+ GRKN +V VI +  
Sbjct: 164 FHTIKQKNGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWT 223

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDG-PIPPVGALSSALSRLQSNRP 119
             AGQ YEAM +AG+LDS+M+VILND+    LP A  DG P   V A SSALS++QS++ 
Sbjct: 224 TMAGQVYEAMGHAGFLDSNMVVILNDSCHTLLPKA--DGRPKMSVNAFSSALSKIQSSKG 281

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R  RE AKG+ K  G  MHE AAKVDEYARGMI   G+TLFEELGLYYIGP+DG N+DD
Sbjct: 282 FRRFREAAKGLAKWFGKGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDD 341

Query: 180 LVAILEEVKNTKTTGPVLIHVVT---EKGRGYPYAEKAADKYHGVAKFDPATGK----QF 232
           L+ +L+EV +  +TGPVL+HV+T       G   +E  A +        P+       +F
Sbjct: 342 LICVLKEVASLDSTGPVLVHVITGTESDTDGNIRSEITASEE------GPSNSSNDLLKF 395

Query: 233 KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQH 292
             +  +++Y   F EAL AEAE DK +V +H  MG    L LF  RFP R FD+GIAEQH
Sbjct: 396 LETGLSRTYNDCFVEALTAEAENDKRIVVVHGGMGMDRSLRLFQSRFPDRFFDLGIAEQH 455

Query: 293 AVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHC 352
           AVTF+AGLAC GLKPFC I S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+ 
Sbjct: 456 AVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITNAGLVGSEGPTNS 515

Query: 353 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPGN 410
           G FD+TFM+CLPNM+VM+PS+E EL  MVATAA I+D+P CFRYPRG  +G    L  GN
Sbjct: 516 GPFDITFMSCLPNMIVMSPSNEDELIDMVATAAMIEDKPICFRYPRGAIVGTSGTLTYGN 575

Query: 411 KGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
              PLE+GKG IL+EG+ +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  L
Sbjct: 576 ---PLEIGKGEILVEGKEIAFLGYGEVVQRCLIARSLLSNFGIQATVANARFCKPLDIDL 632

Query: 471 IRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQ 530
           IR+L + H  LITVEEG++GGFGSHV QF++ DGLLDG +KWRP+VLPDRYI+H S A+Q
Sbjct: 633 IRTLCQQHSFLITVEEGTVGGFGSHVSQFISLDGLLDGRIKWRPIVLPDRYIEHASLAEQ 692

Query: 531 LAQAGLTPSHIAATVFNILGQTREALEIM 559
           L  AGLT  HIAAT   +LG+ R+AL +M
Sbjct: 693 LDLAGLTAHHIAATALTLLGRHRDALLLM 721


>gi|298294378|ref|YP_003696317.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
 gi|296930889|gb|ADH91698.1| deoxyxylulose-5-phosphate synthase [Starkeya novella DSM 506]
          Length = 640

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/554 (61%), Positives = 414/554 (74%), Gaps = 14/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT R+ESEYD FG GHSSTSISAGLGMAV RDL G + NVV VIGDGA
Sbjct: 93  IRTLRQGGGLSGFTNRAESEYDPFGAGHSSTSISAGLGMAVARDLAGAQRNVVCVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN  +S+         PPVGA+S+ L+RL S    
Sbjct: 153 MSAGMAYEAMNNAGAMDSRLIVILNDN-DMSIA--------PPVGAMSAYLARLISGPTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK +T+ +   + + AA+ +E+ARG  +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RTLRETAKQLTRGLPRFLGKKAAQAEEFARGFWTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++  T GPVL+HVVT+KG+GYP AE++ADKYHGV +FD ATG Q K+++   +
Sbjct: 262 LPVLRNVRDAPT-GPVLVHVVTQKGKGYPPAEESADKYHGVQRFDVATGAQKKAASNAPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAE+LI EA  D+ +VA+ AAM  GTGL+LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTSVFAESLIDEARRDERIVAVTAAMPAGTGLDLFGQAFPERTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH G+FD+  +
Sbjct: 381 ATEGFKPFCAIYSTFLQRAYDQIVHDVAIQRLPVRFALDRAGLVGADGATHVGAFDIPML 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMVATAAA D+ P  FRYPRG G+GVE P    G+PLE+G+G
Sbjct: 441 ATLPGMVVMAAADEAELVHMVATAAAYDEGPIAFRYPRGEGVGVERP--EHGVPLEIGRG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL  GT + +CLAAS  L   GL  TVADARF KP+D  L+  LA+ HEV
Sbjct: 499 RIVREGSKVALLSLGTRLAACLAASEQLAGFGLSTTVADARFAKPIDRELVLRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG+ GGFGSHV+  LA+ G LD  +K R L LPDR+I+  SPA QL +AGL    
Sbjct: 559 LVIVEEGATGGFGSHVLTLLAEAGALDRGLKVRCLALPDRFIEQDSPAAQLTEAGLDTDG 618

Query: 541 IAATVFNILGQTRE 554
           I   VF  LG+  E
Sbjct: 619 IVRGVFAALGRADE 632


>gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
 gi|8953400|emb|CAB96673.1| 1-D-deoxyxylulose 5-phosphate synthase-like protein [Arabidopsis
           thaliana]
 gi|332004286|gb|AED91669.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
          Length = 700

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/557 (58%), Positives = 410/557 (73%), Gaps = 23/557 (4%)

Query: 5   RQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAG 64
           RQ  G+SG T R ESEYD FGTGH   SISAGLG+AV RD+KG+++ VVAVI +  +TAG
Sbjct: 166 RQNSGISGVTSRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAG 225

Query: 65  QAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELR 124
           QAYEAM+NAGYLDS+MIVILND++  SL     +G    + ALSS +S++QS++  R+ R
Sbjct: 226 QAYEAMSNAGYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFR 284

Query: 125 EVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL 184
           E+AK +TK+IG  M+E AAKVDEYARGM+  +GSTLFEELGLYYIGPVDGHN++DLV +L
Sbjct: 285 ELAKAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVL 344

Query: 185 EEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTY 244
            EV +  + GPVL+HV+TE  R                  D  T K      R ++Y+  
Sbjct: 345 REVSSLDSMGPVLVHVITEGNR------------------DAETVKNIMVKDR-RTYSDC 385

Query: 245 FAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEG 304
           F EAL+ EAE D+D+V +HA M     L  F  RFP R F+VG+AEQHAVTF+AGL+  G
Sbjct: 386 FVEALVMEAEKDRDIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGG 445

Query: 305 LKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLP 364
           LKPFC I S+F+QRAYDQVVHDVD Q+  VRF +  AGLVG+DGP  CG+FD+ FM+ LP
Sbjct: 446 LKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLP 505

Query: 365 NMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE-LPPGNKGIPLEVGKGRIL 423
           NM+ MAP+DE EL +MVATAA + DRP CFR+PRG+ + +  L P   G+P+E+G+GR+L
Sbjct: 506 NMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNMNYLVP--TGLPIEIGRGRVL 563

Query: 424 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 483
           +EG+ VALLGYG  VQ+CL A +LL   GL +TVADARFCKPLD  L+R L ++H+ LIT
Sbjct: 564 VEGQDVALLGYGAMVQNCLHAHSLLSKLGLNVTVADARFCKPLDIKLVRDLCQNHKFLIT 623

Query: 484 VEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 543
           VEEG +GGFGSHV QF+A DG LDG +KWRP+VLPD YI+  SP +QLA AGLT  HIAA
Sbjct: 624 VEEGCVGGFGSHVAQFIALDGQLDGNIKWRPIVLPDGYIEEASPREQLALAGLTGHHIAA 683

Query: 544 TVFNILGQTREALEIMS 560
           T  ++LG+TREAL +MS
Sbjct: 684 TALSLLGRTREALLLMS 700


>gi|386397241|ref|ZP_10082019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
           WSM1253]
 gi|385737867|gb|EIG58063.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp.
           WSM1253]
          Length = 642

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/556 (59%), Positives = 412/556 (74%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+VAK + +++   +   A +V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDVAKQINQRLPKILANRANRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE +ADKYH V KFD ATG Q KS     +
Sbjct: 264 LPVLKNVRDMET-GPILLHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ATEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AI+DRPS  RYPRG G G+E+P    G+PLE+GKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAINDRPSSLRYPRGEGRGIEMP--EIGVPLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG ++ALL +GT +  C  A+  L ++GL  T+ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RIVREGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EEGS+GGFGSHV Q+L   G LD G V++R +VLPD + DH +PA    +AGL   
Sbjct: 561 LITIEEGSVGGFGSHVAQYLTDQGALDSGLVRFRTMVLPDVFQDHDTPAAMYGRAGLDAK 620

Query: 540 HIAATVFNILGQTREA 555
            I A VF  LG+  +A
Sbjct: 621 GIVAKVFEALGKDVKA 636


>gi|359793593|ref|ZP_09296338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
           CCNWXJ12-2]
 gi|359250198|gb|EHK53724.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium alhagi
           CCNWXJ12-2]
          Length = 637

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/555 (61%), Positives = 409/555 (73%), Gaps = 14/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR ESEYD FG  HSSTSISAGLGMA+ RDL GRKNNV++VIGDGA
Sbjct: 94  IRTLRAEGGLSGFTKRQESEYDPFGAAHSSTSISAGLGMAMARDLTGRKNNVISVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPSGAMSAYLARLASGRAY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEELG Y+IGP+DGHN++ L
Sbjct: 205 MGFRDFGKKLTSYLGKRVDRAVTRAVEHARGYVTGG--TMFEELGFYHIGPIDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V++    GPVLIH+VT+KG+GY  AE A+DKYHGV KFD  TG Q K+ A   S
Sbjct: 263 VPVLRNVRDNGD-GPVLIHIVTQKGKGYAPAEAASDKYHGVNKFDVITGAQAKAPANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI EA  D  +VAI AAM  GTGL+LF   FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTKVFAESLIQEARDDDRIVAITAAMPSGTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADGPTHCG+FD T++
Sbjct: 382 ATEGLKPFVAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGPTHCGAFDTTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAA  D+ P  FRYPRGNG+GV++P   +G+ LE+GKG
Sbjct: 442 ASLPGFVVMAAADEAELRHMVRTAAIYDEGPIAFRYPRGNGVGVDMP--ERGVALEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CL A+  L + GL  TVADARF KPLD  L+R LA+ HE+
Sbjct: 500 RIVREGTKVALLSFGTRLQDCLLAAEELAAAGLPTTVADARFAKPLDEDLVRRLARGHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG+IGGF SHV+QFLA+DGLLD  +K RPLVLPD + DH  P    A AGL  + 
Sbjct: 560 LVTVEEGAIGGFASHVLQFLARDGLLDSGLKVRPLVLPDAFTDHAKPEKMYADAGLDSAG 619

Query: 541 IAATVFNILGQTREA 555
           I  TVF  LG+T  A
Sbjct: 620 IVRTVFAALGRTAHA 634


>gi|299134745|ref|ZP_07027937.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
 gi|298590555|gb|EFI50758.1| deoxyxylulose-5-phosphate synthase [Afipia sp. 1NLS2]
          Length = 638

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/551 (59%), Positives = 410/551 (74%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGF KR+ESEYD FGT HSSTSISAGLGMAV RDL+   NNV+AVIGDG+
Sbjct: 94  IRTLRQGGGLSGFPKRAESEYDAFGTAHSSTSISAGLGMAVARDLQQGNNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG L+S +IVILNDN  +S+         PPVGA+S+ L+RL S++  
Sbjct: 154 MSAGMAYEAMNNAGALNSRLIVILNDN-DMSIA--------PPVGAMSAYLARLISSQTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE+ K +  ++     +   + +EYARGM++G    LFEELG++Y+GP+DGHN+D L
Sbjct: 205 GTAREILKNIAHRMPKFFEDRTLRAEEYARGMVAGG--MLFEELGMFYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++  T GPVLIHVVT+KG+GY  AE++ D+YHGV KFD ATGKQFK+ +   S
Sbjct: 263 LPVLTNVRDNGT-GPVLIHVVTKKGKGYAPAEESDDRYHGVVKFDVATGKQFKTKSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F  +L  EA+ D  +VAI  AM GGTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFGNSLTKEAQKDDKIVAITGAMPGGTGVDIFAKSFPERTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADGPTH G+FD T++
Sbjct: 382 ATEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGAFDNTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN+++MA  DEA+L HMVAT  AID+ PS  RYPRG G+G+ELP  + G+PLE+GKG
Sbjct: 442 GCLPNLIIMAAGDEADLVHMVATQVAIDNAPSALRYPRGEGLGLELP--DVGVPLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG +VAL  +GT +  CL A+  LES GL  TVADARF KPLD  L   LA+SH+V
Sbjct: 500 RVLREGAKVALFSFGTRLGECLKAADELESYGLSTTVADARFLKPLDIDLTLKLARSHDV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+IGGFG+HV+Q LA  G LD  V+ R +VLPD +ID  SPA    QAGL    
Sbjct: 560 LITVEEGAIGGFGTHVIQALADHGALDKGVRVRSMVLPDIFIDQDSPAKMYEQAGLDAKA 619

Query: 541 IAATVFNILGQ 551
           I A VF  LG+
Sbjct: 620 IVAKVFEALGK 630


>gi|433776340|ref|YP_007306807.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
           WSM2073]
 gi|433668355|gb|AGB47431.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium australicum
           WSM2073]
          Length = 645

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/555 (60%), Positives = 407/555 (73%), Gaps = 14/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMA  RDL G +NNV++VIGDGA
Sbjct: 102 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAAARDLSGGRNNVISVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 162 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGKAY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+  K +T  +G        +  E+ARG ++G   TLFEELG Y+IGP+DGHN++ L
Sbjct: 213 VGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGG--TLFEELGFYHIGPIDGHNLEHL 270

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+ A   +
Sbjct: 271 IPVLKNVRDNGK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPA 329

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI E   D  +VA+ AAM GGTGL+LF   FP+R FDVGIAEQHAVTFAAGL
Sbjct: 330 YTKVFAESLIQEGREDDRIVAVTAAMPGGTGLDLFGEVFPSRTFDVGIAEQHAVTFAAGL 389

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADG THCG+FD TF+
Sbjct: 390 ATEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFL 449

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAA+ DD P  FRYPRGNG+GV++P   +G  LE+GKG
Sbjct: 450 ASLPGFVVMAAADEAELRHMVRTAASYDDGPIAFRYPRGNGVGVDMP--ERGSVLEIGKG 507

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VALL +GT +Q CL A+  L + GL  TVADARF KPLD  LIR LA+SHEV
Sbjct: 508 RVVREGSKVALLSFGTRLQDCLIAAEELGAAGLSTTVADARFAKPLDQDLIRRLARSHEV 567

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG+IGGF SHV+QFLA +GLL+  +K RPLVLPD + DH  P    A AGL  + 
Sbjct: 568 LVTVEEGAIGGFASHVLQFLAHEGLLESGLKVRPLVLPDDFTDHAKPEKMYADAGLDVAG 627

Query: 541 IAATVFNILGQTREA 555
           I  TVF  LG T  A
Sbjct: 628 IVRTVFTALGHTVRA 642


>gi|413953253|gb|AFW85902.1| hypothetical protein ZEAMMB73_111194 [Zea mays]
          Length = 611

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/563 (58%), Positives = 405/563 (71%), Gaps = 9/563 (1%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+ Q +GLSGFT R ESEYD FG GH   S+SAGLGMAV RD+ GRKN +V VI +  
Sbjct: 53  FHTITQKNGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWT 112

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM +AG+LDS+M+VILND+    LP A   G    V A SSALS++QS++  
Sbjct: 113 TMAGQVYEAMGHAGFLDSNMVVILNDSCHTLLPKAD-GGAKMSVNAFSSALSKIQSSKGF 171

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R  RE AKG+ K  G  MHE AAKVDEYARGMI   G+TLFEELGLYYIGP+DG N+DDL
Sbjct: 172 RRFREAAKGLAKWFGKGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDL 231

Query: 181 VAILEEVKNTKTTGPVLIHVVT--EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           + +L+EV +  +TGPVL+HV+T  E   G     +      G +   P   K F  +  +
Sbjct: 232 ICVLKEVASLDSTGPVLVHVITGTENDTGGIIGSEINAVEEGPSNSSPDLLK-FLGTGLS 290

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
           ++Y   F EAL AEAE DK +V +H  MG    L LF  RFP R FD+GIAEQHAVTF+A
Sbjct: 291 RTYNDCFVEALTAEAENDKRIVVVHGGMGIDRSLRLFQSRFPDRFFDLGIAEQHAVTFSA 350

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLAC GLKPFC I S+F+QRAYDQ++ DVD+QK+PVRFA+  AGLVG++GPT+ G FD+T
Sbjct: 351 GLACGGLKPFCIIPSTFLQRAYDQIIEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDIT 410

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV--ELPPGNKGIPLE 416
           FM+CLPNM+VM+PS+E EL  MVATAA I+DRP CFRYPRG  +G    +  GN   P E
Sbjct: 411 FMSCLPNMIVMSPSNEDELIDMVATAAMIEDRPICFRYPRGAIVGTSGSVTYGN---PFE 467

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKG IL+EG+ +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR+L +
Sbjct: 468 IGKGEILVEGKEIAFLGYGEVVQRCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQ 527

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            H  LITVEEG++GGFGSHV QF++ DGLLDG  KWRP+VLPDRYI+H S A+QL  AGL
Sbjct: 528 QHSFLITVEEGTVGGFGSHVSQFISLDGLLDGRTKWRPIVLPDRYIEHASLAEQLDLAGL 587

Query: 537 TPSHIAATVFNILGQTREALEIM 559
           T  HIAAT   +LG+ R+AL +M
Sbjct: 588 TAHHIAATALTLLGRHRDALLLM 610


>gi|85717532|ref|ZP_01048477.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
 gi|85695649|gb|EAQ33562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter sp. Nb-311A]
          Length = 642

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/552 (59%), Positives = 411/552 (74%), Gaps = 14/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISA LGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + K +   + + A +V+EY+RG ++ SG TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RSLREAAKQLGKHLPKMIADRAERVEEYSRGFMTNSG-TLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +  GP+L+HVVT+KG+GYP AE AADKYH V KFD +TG Q KS     +
Sbjct: 264 LPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEAAADKYHAVVKFDVSTGAQSKSKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDRIVAITAAMPSGTGVDIFNKAFPERTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD  F+
Sbjct: 383 ATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DE+EL HMVAT  AI+DRPS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 443 GCLPNMVIMAAADESELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G ++ALL +GT +  C  A+  L ++GL  TVADARF KPLD  L+  LA+ H+V
Sbjct: 501 RIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTVADARFMKPLDEDLVLRLARDHDV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EEGSIGGFG+HV+Q L  +G LD G V+ R ++LPD ++DH +PA   A+AGL   
Sbjct: 561 LVTIEEGSIGGFGAHVLQTLTDNGALDTGLVRVRSMILPDEFLDHDTPAAMYARAGLDAK 620

Query: 540 HIAATVFNILGQ 551
            I A VF  LG+
Sbjct: 621 GIVAKVFEALGK 632


>gi|374573936|ref|ZP_09647032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
 gi|374422257|gb|EHR01790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. WSM471]
          Length = 642

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/556 (58%), Positives = 412/556 (74%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+VAK + +++   +   A +V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDVAKQINQRLPKILANRANRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE +ADKYH V KFD ATG Q KS     +
Sbjct: 264 LPVLKNVRDMET-GPILLHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ATEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AI+DRPS  RYPRG G G+E+P    G+PLE+GKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAINDRPSSLRYPRGEGRGIEMP--EVGVPLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G ++ALL +GT +  C  A+  L ++GL  T+ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EEGS+GGFGSHV Q+L   G LD G V++R +VLPD + DH +PA    +AGL   
Sbjct: 561 LITIEEGSVGGFGSHVAQYLTDQGALDSGLVRFRTMVLPDVFQDHDTPAAMYGRAGLDAK 620

Query: 540 HIAATVFNILGQTREA 555
            I A VF  LG+  +A
Sbjct: 621 GIVAKVFEALGKDVKA 636


>gi|407770454|ref|ZP_11117823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
           M-5 = DSM 17429]
 gi|407286477|gb|EKF11964.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira xiamenensis
           M-5 = DSM 17429]
          Length = 639

 Score =  656 bits (1693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/551 (59%), Positives = 403/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG-RKNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSESEYD FG GHSSTSISAGLGMAV   L   ++ NV+AVIGDG
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVANQLSDDKRKNVIAVIGDG 153

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +M+AG AYEAMNNA   D  MIVILNDN  +S+         PPVG++S  LSRL S + 
Sbjct: 154 SMSAGMAYEAMNNAAAADQRMIVILNDN-DMSIA--------PPVGSMSGYLSRLISGKG 204

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            + LR  AKG+TK +   + E A K++EY RGM++G   TLFEE+G +Y+GP+DGHN+D 
Sbjct: 205 YQGLRNAAKGLTKHLPRQIEEAARKIEEYTRGMVTGG--TLFEEMGFFYVGPIDGHNLDH 262

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V++    GP+L+HVVT+KG+GY  AE AADKYHGVAKFD  TGKQ K++    
Sbjct: 263 LLPVLKNVRDADVDGPILVHVVTQKGKGYGPAENAADKYHGVAKFDVVTGKQAKATPNAP 322

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  + E L   AE D  + AI AAM  GTG+N+F  RFP R FDVGIAEQHAVTFAAG
Sbjct: 323 SYTKVYGETLTKLAETDDKITAITAAMPSGTGVNIFAERFPDRAFDVGIAEQHAVTFAAG 382

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPFC +YS+F+QRAYDQVVHDV +Q LPVRFAMDRAGLVGADG TH G++D+ +
Sbjct: 383 MACEGYKPFCTLYSTFLQRAYDQVVHDVVIQNLPVRFAMDRAGLVGADGATHAGAYDIAY 442

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + CLPN+V+MA +DEAEL HM  TA AIDDRPS FRYPRG G+GVE+P   +G  LE+GK
Sbjct: 443 LGCLPNIVLMAAADEAELVHMTTTAWAIDDRPSAFRYPRGEGVGVEMPA--EGKVLEIGK 500

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG ++A+L YGT +   + A+  L + GL  TVADARF KPLDHALI  LA++HE
Sbjct: 501 GRILREGGKIAILSYGTRLAEAMLAAEDLAARGLPATVADARFAKPLDHALIADLARNHE 560

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EEGSIGGFG+ V+Q +A  GLLD  +K R + LPD  IDH  P  Q A+AGL   
Sbjct: 561 VLITIEEGSIGGFGAMVLQHMAGQGLLDHGLKVRTMALPDALIDHDKPDIQYAKAGLDAQ 620

Query: 540 HIAATVFNILG 550
            I  T    LG
Sbjct: 621 SIVKTALGALG 631


>gi|384220819|ref|YP_005611985.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 6]
 gi|354959718|dbj|BAL12397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium japonicum
           USDA 6]
          Length = 642

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/556 (58%), Positives = 411/556 (73%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + K++   +   A +V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQINKRLPKIIANRANRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE +ADKYH V KFD ATG Q K+     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKAKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EA+ D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAQKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ASEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AIDDRPS  RYPRG G G+E+P    G+PLEVGKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAIDDRPSSLRYPRGEGRGIEMP--EVGVPLEVGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G ++ALL +GT +  C  A+  L ++GL  ++ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RMIRQGSKIALLSFGTRLAECEKAADELAAHGLSTSIADARFMKPLDTELVLKLARDHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EEGS+GGFGSHV Q+L   G LD G VK+R +VLPD + DH +PA    +AGL   
Sbjct: 561 LITIEEGSVGGFGSHVAQYLTDQGALDSGMVKFRSMVLPDVFQDHDTPAAMYGRAGLDAK 620

Query: 540 HIAATVFNILGQTREA 555
            I A VF  LG+  +A
Sbjct: 621 GIVAKVFEALGKDVKA 636


>gi|13476214|ref|NP_107784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mesorhizobium loti
           MAFF303099]
 gi|21263539|sp|Q985Y3.1|DXS_RHILO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|14026974|dbj|BAB53570.1| 1-D-deoxyxylulose 5-phosphate synthase [Mesorhizobium loti
           MAFF303099]
          Length = 637

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/555 (60%), Positives = 406/555 (73%), Gaps = 14/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMA  RDL G +NNV+AVIGDGA
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAAARDLSGGRNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 154 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGKAY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+  K +T  +G        +  E+ARG ++G   TLFEELG Y+IGP+DGHN++ L
Sbjct: 205 AGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGG--TLFEELGFYHIGPIDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+ A   +
Sbjct: 263 IPVLKNVRDNGE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI EA  D  +VA+ AAM  GTGL+LF   FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTKVFAESLIREAREDDRIVAVTAAMPSGTGLDLFGEVFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADG THCG+FD TF+
Sbjct: 382 ATEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA DD P  FRYPRGNG+GV++P   +G  LE+GKG
Sbjct: 442 ASLPGFVVMAAADEAELRHMVRTAAAYDDGPIAFRYPRGNGVGVDMP--ERGEVLELGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VALL +GT +Q CL A+  L + GL  TVADARF KPLD  LIR LA+SHEV
Sbjct: 500 RVVREGSKVALLSFGTRLQDCLIAAEELGAAGLSTTVADARFAKPLDEDLIRRLARSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG+IGGF SHV+QFLA +GLL+  +K RPLVLPD + DH  P    A AGL  + 
Sbjct: 560 LVTVEEGAIGGFASHVLQFLAHEGLLESGLKVRPLVLPDVFTDHAKPEKMYADAGLDAAG 619

Query: 541 IAATVFNILGQTREA 555
           I  TVF  L  T  A
Sbjct: 620 IVRTVFTALDHTARA 634


>gi|307000604|gb|ADN22972.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 722

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/561 (58%), Positives = 403/561 (71%), Gaps = 5/561 (0%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+ Q +GLSGFT R ESEYD FG GH   S+SAGLGMAV RD+ GRKN +V VI +  
Sbjct: 164 FHTITQKNGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVCRDINGRKNRIVTVISNWT 223

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM +AG+LDS+M+VILND+    LP A   G    V A SSALS++QS++  
Sbjct: 224 TMAGQVYEAMGHAGFLDSNMVVILNDSCHTLLPKAD-GGAKMSVNAFSSALSKIQSSKGF 282

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R  RE AKG+ K  G  MHE AAKVDEYARGMI   G+TLFEELGLYYIGP+DG N+DDL
Sbjct: 283 RRFREAAKGLAKWFGKGMHEFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGRNIDDL 342

Query: 181 VAILEEVKNTKTTGPVLIHVVT--EKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           + +L+EV +  +TGPVL+HV+T  E   G     +      G +   P   K F  +  +
Sbjct: 343 ICVLKEVASLDSTGPVLVHVITGTENDTGGIIGSEINAVEEGPSNSSPDLLK-FLGTGLS 401

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
           ++Y   F EAL AEAE DK +V +H  MG    L LF  RFP R FD+GIAEQHAVTF+A
Sbjct: 402 RTYNDCFVEALTAEAENDKRIVVVHGGMGIDRSLRLFQSRFPDRFFDLGIAEQHAVTFSA 461

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLAC GLKPFC I S+F+QRAYDQ++ DVD+QK+PVRFA+  AGLVG++GPT+ G FD+T
Sbjct: 462 GLACGGLKPFCIIPSTFLQRAYDQIIEDVDMQKIPVRFAITNAGLVGSEGPTNSGPFDIT 521

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM+CLPNM+VM+PS+E EL  MVATAA I+DRP CFRYPRG  +G        G P E+G
Sbjct: 522 FMSCLPNMIVMSPSNEDELIDMVATAAMIEDRPICFRYPRGAIVGTS-GSVTYGNPFEIG 580

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG IL+EG+ +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  LIR+L + H
Sbjct: 581 KGEILVEGKEIAFLGYGEVVQRCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQH 640

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
             LITVEEG++GGFGSHV QF++ DGLLDG  KWRP+VLPDRYI+H S A+QL  AGLT 
Sbjct: 641 SFLITVEEGTVGGFGSHVSQFISLDGLLDGRTKWRPIVLPDRYIEHASLAEQLDLAGLTA 700

Query: 539 SHIAATVFNILGQTREALEIM 559
            HIAAT   +LG+ R+AL +M
Sbjct: 701 HHIAATALTLLGRHRDALLLM 721


>gi|115523090|ref|YP_780001.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisA53]
 gi|122297370|sp|Q07SR3.1|DXS_RHOP5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115517037|gb|ABJ05021.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           BisA53]
          Length = 640

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/553 (59%), Positives = 406/553 (73%), Gaps = 13/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES++D FG GHSSTSISAGLGMAV  DL G KNNV+AVIGDG+
Sbjct: 94  IRTLRTGGGLSGFTKRTESDHDPFGAGHSSTSISAGLGMAVASDLAGTKNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 ISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE  K + K +   + + AA+ +EY+RG + G G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGGG-TLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++    GP LIHVVT+KG+GY  AE AADKYH V KFD ATG Q K+ +   S
Sbjct: 264 LPILQNVRDADA-GPFLIHVVTQKGKGYAPAEAAADKYHAVVKFDIATGTQAKTKSNAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F  +L+ EA+ D  +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGASLVKEAQKDDKIVGITAAMPSGTGIDIFEKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ATEGFKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN V+MA SDEAEL HMVAT  AI+D PS  RYPRG G GVE+P    GIPLE+GKG
Sbjct: 443 GCLPNFVIMAASDEAELVHMVATQVAINDAPSAVRYPRGEGRGVEMP--EVGIPLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G ++ALL +GT +  C  A+  L + GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 501 RVVRQGNKIALLSFGTRLAECEKAADELATLGLSTTVADARFMKPLDVELVLKLAREHEV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV+Q LA+ G+LDG V+ R LVLPD ++DH +PA   A+AGL    
Sbjct: 561 LITVEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPAVMYARAGLDAKG 620

Query: 541 IAATVFNILGQTR 553
           I   VF  LG+ +
Sbjct: 621 IVKKVFEALGKDK 633


>gi|383773560|ref|YP_005452626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
 gi|381361684|dbj|BAL78514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bradyrhizobium sp. S23321]
          Length = 642

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/556 (58%), Positives = 411/556 (73%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES+YD FG  HSSTSISAGLGMAV RDL G  NNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVARDLAGGNNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + +++   +   A +V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLREAAKQINQRLPKVIANRANRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE +ADKYH V KFD ATG Q KS     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYGPAEASADKYHAVVKFDVATGTQAKSKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +VAI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVAITAAMPSGTGVDIFNKAFPDRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ATEGYKPFCAIYSTFLQRGYDQIVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AI+DRPS  RYPRG G G+E+P  + G+PLE+GKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAINDRPSSLRYPRGEGRGIEMP--DVGVPLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G ++ALL +GT +  C  A+  L ++GL  T+ADARF KPLD  L+  LA+ H+V
Sbjct: 501 RVIRQGNKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHDV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EEGS+GGFGSHV Q+L   G LD G V++R +VLPD + DH +PA    +AGL   
Sbjct: 561 LITIEEGSVGGFGSHVAQYLTDQGALDTGMVRFRSMVLPDVFQDHDTPAAMYGRAGLDAK 620

Query: 540 HIAATVFNILGQTREA 555
            I A VF  LG+  +A
Sbjct: 621 GIVAKVFEALGKDVKA 636


>gi|319784710|ref|YP_004144186.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170598|gb|ADV14136.1| deoxyxylulose-5-phosphate synthase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 637

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/555 (60%), Positives = 406/555 (73%), Gaps = 14/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMA  RDL G +NNV+AVIGDGA
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAAARDLSGGRNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 154 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGKAY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+  K +T  +G        +  E+ARG ++G   TLFEELG Y+IGP+DGHN++ L
Sbjct: 205 IGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGG--TLFEELGFYHIGPIDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+ A   +
Sbjct: 263 IPVLKNVRDNGE-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAPANAPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+L+ E   D  +VA+ AAM  GTGL+LF   FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTKVFAESLVQEGREDDRIVAVTAAMPSGTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADG THCG+FD TF+
Sbjct: 382 ATEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAA+ DD P  FRYPRGNG+GV++P   +G  LE+GKG
Sbjct: 442 ATLPGFVVMAAADEAELRHMVRTAASYDDGPIAFRYPRGNGVGVDMP--ERGSVLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CL A+  L + GL  TVADARF KPLD  LIR LA+SHEV
Sbjct: 500 RIVREGTKVALLSFGTRLQDCLIAAEELGAAGLSTTVADARFAKPLDEDLIRRLARSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG++GGF SHV+QFLA +GLL+  +K RPLVLPD + DH  P    A AGL  + 
Sbjct: 560 LVTVEEGAVGGFASHVLQFLAHEGLLESGLKVRPLVLPDAFTDHAKPEKMYADAGLDAAG 619

Query: 541 IAATVFNILGQTREA 555
           I  TVF  LG T  A
Sbjct: 620 IVRTVFVALGHTVRA 634


>gi|365886052|ref|ZP_09425024.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3809]
 gi|365338480|emb|CCD97555.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Bradyrhizobium sp. STM 3809]
          Length = 641

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/551 (58%), Positives = 410/551 (74%), Gaps = 13/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + + +   +   A++V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE AADKYH VAKFD ATG Q K+     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAKAKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG K FCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 AAEGYKAFCAIYSTFLQRGYDQIVHDVCIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AI+DRPS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 443 GCLPNMVIMAAADEAELVHMVATQVAINDRPSSVRYPRGEGRGVEMP--EVGVPLPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G+++ALL +GT +  C  A+  L ++GL  ++ADARF KPLD  L+  LA+ HE+
Sbjct: 501 RMIRQGKQIALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLARDHEI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+QFLA  G+LDG +K R +VLPD + DH +P    A+AGL    
Sbjct: 561 LITIEEGSIGGFGSHVMQFLADQGMLDGGLKMRSMVLPDEFQDHDTPTAMYARAGLDAKG 620

Query: 541 IAATVFNILGQ 551
           I   VF +LG+
Sbjct: 621 IVRKVFEVLGK 631


>gi|456356899|dbj|BAM91344.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agromonas oligotrophica
           S58]
          Length = 641

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/555 (58%), Positives = 412/555 (74%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK + + +   +   A++V+EY+RG +   G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 RTLRDAAKQLGQHLPKVIANRASRVEEYSRGFMM-DGGTLFEELGFYYVGPIDGHNLDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +T GP+L+HVVT+KG+GY  AE AADKYH VAKFD ATG Q K+     +
Sbjct: 264 LPVLKNVRDMET-GPILVHVVTQKGKGYSPAEAAADKYHAVAKFDIATGTQAKAKPNAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  +V I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YQNVFGQSLVKEAEKDDKIVGITAAMPSGTGIDIFAKAFPKRTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 383 ASEGYKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA SDEAEL HMVAT  AI+D+PS  RYPRG G GVE+P    G+ L +GKG
Sbjct: 443 GCLPNMVIMAASDEAELVHMVATQVAINDKPSAVRYPRGEGRGVEMP--EFGVALPIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G++VALL +GT +  C  A+  L ++GL  ++ADARF KPLD  L+  LA+ H++
Sbjct: 501 RMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVMKLAREHDI 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+Q+LA  G+LDG +K R +VLPD + DH +PA   A+AGL    
Sbjct: 561 LITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKG 620

Query: 541 IAATVFNILGQTREA 555
           I   VF  LG+  +A
Sbjct: 621 IVRKVFEALGKDYKA 635


>gi|86751558|ref|YP_488054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           HaA2]
 gi|118595612|sp|Q2IRL7.1|DXS_RHOP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|86574586|gb|ABD09143.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodopseudomonas palustris
           HaA2]
          Length = 638

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/555 (59%), Positives = 405/555 (72%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL G  NNV+AVIGDG+
Sbjct: 91  IRTLRTAGGLSGFTKRTESDYDPFGAAHSSTSISAGLGMAVARDLAGGTNNVIAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 151 ISAGMAYEAMNNAGAMNSRLIVILNDN-NMSIA--------PPVGAMSAYLSRLYSGKTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE  K + K +   + + AA+ +EY+RG + G G TLFEELG YY+GP+DGHN+D L
Sbjct: 202 RSLREAGKQIGKHLPKLIADRAARAEEYSRGFMMGGG-TLFEELGFYYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++ +T GP LIHVVT+KG+GY  AE A+DKYH V KFD ATG Q K+ +   S
Sbjct: 261 LPILQNVRDAET-GPFLIHVVTQKGKGYAPAEAASDKYHAVVKFDIATGTQAKAKSNAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EA  D  VV I AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YQNVFGQSLVKEAAKDDKVVGITAAMPSGTGIDIFEKAFPDRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 380 ATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN V+MA SDEAEL HMVAT  AI+DRPS  RYPRG G GVE+P  + G+PLE+GKG
Sbjct: 440 GCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--DVGVPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G +VALL +GT +  C  A+  L + GL  TVADARF KPLD  L+  LA  HE+
Sbjct: 498 RVIRQGNKVALLSFGTRLAECEKAAEELATLGLSTTVADARFMKPLDVDLVIKLANEHEI 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+Q L+  G LDG VK R +VLPD ++DH +PA   A AGL    
Sbjct: 558 LITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMRAMVLPDVFLDHDTPAAMYAAAGLDAKA 617

Query: 541 IAATVFNILGQTREA 555
           I   VF  LG+   A
Sbjct: 618 IVKKVFEALGKEHAA 632


>gi|338739777|ref|YP_004676739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
 gi|337760340|emb|CCB66171.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Hyphomicrobium sp. MC1]
          Length = 635

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/551 (60%), Positives = 402/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GL+GFT R ES YD FG GHSSTSISA LGMAV RDL G+ NNVVAVIGDGA
Sbjct: 91  IRTLRQPGGLAGFTNREESVYDPFGAGHSSTSISAALGMAVARDLTGKSNNVVAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG  +  +IV+LNDN  +S+         PP GALS+ L+R+ S+   
Sbjct: 151 MSAGMAYEAINNAGARNERLIVVLNDN-DMSIA--------PPTGALSAYLARVTSSGTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ AK + K +       AA+V+EY R +  G     FEELG YY+GP+DGHN + L
Sbjct: 202 VHLRDYAKQLAKMLPKAWERRAARVEEYTRHLWQGGA--WFEELGFYYVGPIDGHNFEQL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +  GP+L+HVVT+KG+GY  AE + DKYHGV KF+  TG Q K      S
Sbjct: 260 LPVLKNVRDLEQ-GPILVHVVTQKGKGYAPAEASPDKYHGVNKFNVVTGAQDKPKPNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LIAEA  DK VVAI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTKVFADSLIAEARKDKRVVAITAAMPSGTGLDYFGKEFPDRTFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRFA+DRAGLVGADG TH GSFDV ++
Sbjct: 379 AAEGYKPFTAIYSTFLQRAYDQVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDVAYL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLP+ V+MA +DEAEL HMVAT A IDDRPS  RYPRG G+GVELP   +GIPLE+GKG
Sbjct: 439 ACLPDFVIMAAADEAELVHMVATQAQIDDRPSALRYPRGEGVGVELPA--EGIPLEIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL  GT +  CL A+  L S GL  TVADARF KPLD ALIR LA +HEV
Sbjct: 497 RIVRQGSKVALLSLGTRLAECLKAADQLASFGLSTTVADARFAKPLDEALIRDLATNHEV 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGSIGGFGSHV+QFL+ +GLLD  ++ RP VLPD +IDHG P      A L  S 
Sbjct: 557 LVTVEEGSIGGFGSHVLQFLSNEGLLDRGLRVRPKVLPDVFIDHGKPEAMYEAARLNASG 616

Query: 541 IAATVFNILGQ 551
           I  TVF  LG+
Sbjct: 617 IVETVFAALGR 627


>gi|294851814|ref|ZP_06792487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
 gi|294820403|gb|EFG37402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NVSL 07-0026]
          Length = 643

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGLNLF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLNLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|338973399|ref|ZP_08628763.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|414170518|ref|ZP_11426072.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
 gi|338233442|gb|EGP08568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bradyrhizobiaceae
           bacterium SG-6C]
 gi|410884296|gb|EKS32124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia clevelandensis ATCC
           49720]
          Length = 640

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/551 (60%), Positives = 407/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV RDL G+KNNV+AVIGDG+
Sbjct: 94  IRTLRTGGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVARDLTGKKNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG + S +IVILNDN  +S+         PPVGA+S+ L+RL S++  
Sbjct: 154 MSAGMAYEAMNNAGAMHSRLIVILNDN-DMSIA--------PPVGAMSAYLARLLSSQTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE  K +  ++     + A + +EYARGM++G   TLFEELG +Y+GP+DGHN+D L
Sbjct: 205 GSAREALKNLAHKLPKFFEDRALRAEEYARGMVTGG--TLFEELGFFYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE +ADKYH VAKFD ATG Q K+ +   S
Sbjct: 263 LPVLTNVRDAGN-GPVLIHVVTQKGKGYAPAEASADKYHAVAKFDVATGAQAKAKSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F ++LI EA+ D  +VAI AAM GGTG++LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTAVFGQSLIKEAQKDDKIVAITAAMPGGTGVDLFEKVFPERTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVG DGPTH GSFD  ++
Sbjct: 382 ATEGFKPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGQDGPTHAGSFDNAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP  V+MA +DEA+L HMVAT  A+DD PS  RYPRG G GVE+P    G+ L +GKG
Sbjct: 442 GCLPGFVIMAAADEADLVHMVATQVALDDAPSALRYPRGEGRGVEMP--EVGVALPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +G  +  CL A+  LE++GL  TVADARF KPLD  +I  LA+ HEV
Sbjct: 500 RIMREGSKVALLSFGARLGECLKAADELETHGLSATVADARFMKPLDLDMILKLAREHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFG+HV+Q LA  G+LD  ++ R +VLPD +IDH SPA   AQAGL    
Sbjct: 560 LITIEEGSIGGFGTHVLQTLADHGVLDRGLRVRNMVLPDTFIDHDSPAAMYAQAGLDAKG 619

Query: 541 IAATVFNILGQ 551
           I A VF  LG+
Sbjct: 620 IVAKVFEALGK 630


>gi|296444536|ref|ZP_06886500.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
           OB3b]
 gi|296257804|gb|EFH04867.1| deoxyxylulose-5-phosphate synthase [Methylosinus trichosporium
           OB3b]
          Length = 643

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/562 (58%), Positives = 412/562 (73%), Gaps = 16/562 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + ++RQ  GLSGF+KR+ESEYD FG GHSSTSISAGLGMA+GRDL G  N+VVAVIGD A
Sbjct: 93  IRSLRQGGGLSGFSKRAESEYDAFGAGHSSTSISAGLGMAIGRDLSGGNNHVVAVIGDSA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG LDS +IVILNDN  +S+         PP GA+S+ L+RL S    
Sbjct: 153 LSAGMAYEAMNNAGALDSRLIVILNDN-DMSIA--------PPTGAMSAYLARLVSGGAY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + + +   +++ A K +E++R  I+G G T+FEELG YY+GP+DGHN++ L
Sbjct: 204 RTLRETAKQLARHLPHFLYDKARKAEEFSRSFITGGG-TMFEELGFYYVGPIDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ K  GPVL+HVVT+KG+GY  AE AAD+YHGV +FD  TG Q K  A   S
Sbjct: 263 LPVLTNVRD-KDDGPVLVHVVTQKGKGYGPAEAAADRYHGVNRFDVLTGAQDKPKANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA++L+AEAE D  +VAI AAM GGTGL+LF + FP R FDV IAEQHAVTFAAGL
Sbjct: 322 YTSVFAKSLVAEAERDDKIVAITAAMPGGTGLDLFEKAFPDRTFDVAIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KPFCA+YS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADGPTH G+FDV ++
Sbjct: 382 ACEGYKPFCALYSTFLQRAYDQVVHDVAIQHLPVRFAIDRAGLVGADGPTHAGAFDVAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P MV+MA +DEAEL HMVATA   D+ P  FRYPRG G+G++LP   +G PLE+G+G
Sbjct: 442 GCIPGMVIMAAADEAELVHMVATAVQYDEGPIAFRYPRGEGVGLDLP--QRGEPLEIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VALL  GT +   L A+  L + G+ +TVADARF KP+D  L+R LA  HEV
Sbjct: 500 RILREGSQVALLSLGTRLAEALTAAQELTARGVSVTVADARFAKPIDRDLLRRLAAEHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGT---VKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           LIT+EEGSIGGFG+   QFL+++G LDGT    K+R ++LPD YIDH      LA+A L 
Sbjct: 560 LITIEEGSIGGFGAQAFQFLSEEGALDGTRGAFKFRSMILPDIYIDHDKQDIMLAKASLD 619

Query: 538 PSHIAATVFNILGQTREALEIM 559
              I A     LG  R A   M
Sbjct: 620 ARAIVAKALETLGDERGAARAM 641


>gi|260566959|ref|ZP_05837429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
           40]
 gi|260156477|gb|EEW91557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 4 str.
           40]
          Length = 643

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANVPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|260754213|ref|ZP_05866561.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
           870]
 gi|260757433|ref|ZP_05869781.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
           292]
 gi|260883238|ref|ZP_05894852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
           str. C68]
 gi|297247834|ref|ZP_06931552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
           str. B3196]
 gi|260667751|gb|EEX54691.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 4 str.
           292]
 gi|260674321|gb|EEX61142.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 6 str.
           870]
 gi|260872766|gb|EEX79835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 9
           str. C68]
 gi|297175003|gb|EFH34350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 5
           str. B3196]
          Length = 643

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 406/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L+LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|306845065|ref|ZP_07477645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
 gi|306274480|gb|EFM56275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella inopinata BO1]
          Length = 643

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|23501337|ref|NP_697464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|161618408|ref|YP_001592295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
 gi|261754435|ref|ZP_05998144.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
           686]
 gi|376274806|ref|YP_005115245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
 gi|376280126|ref|YP_005154132.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
 gi|384224120|ref|YP_005615284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|30315829|sp|Q8G292.1|DXS_BRUSU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|189027768|sp|A9M8W0.1|DXS_BRUC2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|23347228|gb|AAN29379.1| deoxyxylulose-5-phosphate synthase [Brucella suis 1330]
 gi|161335219|gb|ABX61524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis ATCC 23365]
 gi|261744188|gb|EEY32114.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis bv. 3 str.
           686]
 gi|343382300|gb|AEM17792.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis 1330]
 gi|358257725|gb|AEU05460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella suis VBI22]
 gi|363403373|gb|AEW13668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella canis HSK A52141]
          Length = 643

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANVPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|225626944|ref|ZP_03784983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
 gi|256368891|ref|YP_003106397.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
 gi|261218447|ref|ZP_05932728.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
 gi|261221652|ref|ZP_05935933.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
 gi|261320703|ref|ZP_05959900.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
 gi|261751780|ref|ZP_05995489.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
 gi|261757668|ref|ZP_06001377.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
 gi|265983591|ref|ZP_06096326.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
 gi|306839868|ref|ZP_07472666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
 gi|306842279|ref|ZP_07474941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
 gi|225618601|gb|EEH15644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ceti str. Cudo]
 gi|255999049|gb|ACU47448.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella microti CCM 4915]
 gi|260920236|gb|EEX86889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti B1/94]
 gi|260923536|gb|EEX90104.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M13/05/1]
 gi|261293393|gb|EEX96889.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M644/93/1]
 gi|261737652|gb|EEY25648.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. F5/99]
 gi|261741533|gb|EEY29459.1| 1-deoxyxylulose-5-phosphate synthase [Brucella suis bv. 5 str. 513]
 gi|264662183|gb|EEZ32444.1| 1-deoxyxylulose-5-phosphate synthase [Brucella sp. 83/13]
 gi|306287587|gb|EFM59038.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. BO2]
 gi|306405054|gb|EFM61335.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella sp. NF 2653]
          Length = 643

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|323135714|ref|ZP_08070797.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
 gi|322398805|gb|EFY01324.1| deoxyxylulose-5-phosphate synthase [Methylocystis sp. ATCC 49242]
          Length = 642

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/562 (59%), Positives = 409/562 (72%), Gaps = 17/562 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ESEYD FG GHSSTSISAGLGMAV RDL G  N+VVAVIGD +
Sbjct: 93  IRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSISAGLGMAVARDLAGGNNHVVAVIGDSS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LDS +IVILNDN  +S+         PP GA+S+ L+RL S    
Sbjct: 153 MSAGMAYEALNNAGALDSRLIVILNDN-DMSIA--------PPTGAMSAYLARLVSGGAY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +R+ AK +   +   +++ A K +E++R  I+G   T+FEELG YY+GP+DGHN+D L
Sbjct: 204 RSIRDAAKQLASHLPRFIYDKARKAEEFSRSFITGG--TMFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ K  GPVL+HVVT+KG+GY  AE A DKYHGV KFD  TGKQFK  A   S
Sbjct: 262 LPVLMNVRD-KDDGPVLVHVVTQKGKGYAPAEAADDKYHGVVKFDVETGKQFKPKANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+AEAE D  +VAI AAM  GTGL++F + FP R FDV IAEQHAVTFAAGL
Sbjct: 321 YTGVFAKALVAEAEHDDRIVAITAAMPSGTGLDIFGKHFPQRTFDVAIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KPFCA+YS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADGPTH G+FD+ ++
Sbjct: 381 ACEGYKPFCALYSTFLQRGYDQVVHDVAIQHLPVRFAIDRAGLVGADGPTHAGAFDIAYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP MVVMAPSDEAEL HMVATAAA D+ P  FRYPRG G+GVELP   +G  LE+GKG
Sbjct: 441 GCLPGMVVMAPSDEAELMHMVATAAAYDEGPIAFRYPRGEGVGVELP--ERGDVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG +VAL+  GT +   + A+  LE+ G+  TVADARF KP+D  L+R LA +HEV
Sbjct: 499 RVLREGTKVALVALGTRLAEAMKAAEELENYGVSTTVADARFAKPIDRDLLRRLAANHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD---GTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           +IT+EEGSIGGFGS V Q L+ DGLLD   G  K+R + LPD YIDH      +A+A L 
Sbjct: 559 VITLEEGSIGGFGSQVFQALSDDGLLDGARGAFKFRSMTLPDAYIDHDKHEIMIARAMLD 618

Query: 538 PSHIAATVFNILGQTREALEIM 559
              I A    +LG  + A  +M
Sbjct: 619 SKAIVAKALELLGDEKGAARVM 640


>gi|265997614|ref|ZP_06110171.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
 gi|262552082|gb|EEZ08072.1| 1-deoxyxylulose-5-phosphate synthase [Brucella ceti M490/95/1]
          Length = 646

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|75674831|ref|YP_317252.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
           Nb-255]
 gi|118595594|sp|Q3SUZ1.1|DXS_NITWN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|74419701|gb|ABA03900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter winogradskyi
           Nb-255]
          Length = 666

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/552 (59%), Positives = 406/552 (73%), Gaps = 14/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISA LGMAV RDL G  NNV+AVIGDGA
Sbjct: 118 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASLGMAVARDLSGGNNNVIAVIGDGA 177

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 178 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 228

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + K +   + + A +V+EY+RG ++ SG TLFEELG YY+GP+DGHN+D L
Sbjct: 229 RSLREAAKQLGKHLPKMIADRAERVEEYSRGFMTNSG-TLFEELGFYYVGPIDGHNLDHL 287

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +  GP+L+HVVT+KG+GYP AE AADKYH V KFD +TG Q KS     S
Sbjct: 288 LPVLKNVRDMEN-GPILVHVVTQKGKGYPPAEAAADKYHAVVKFDISTGAQSKSKPNAPS 346

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F  +L+ EAE D  +VAI AAM  GTG+++F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 347 YQNVFGASLVKEAEKDDKIVAITAAMPSGTGVDIFNNAFPERTFDVGIAEQHAVTFAAGL 406

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD  F+
Sbjct: 407 ATEGFKPFCAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAFL 466

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA +DEAEL HMVAT  AI+DRPS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 467 GCLPNMVIMAAADEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKG 524

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G ++ALL +GT +  C  A+  L ++GL  T+ADARF KPLD  L   LA+ H+V
Sbjct: 525 RIVRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLALKLAREHDV 584

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EEGSIGGFGSHV+Q L  +G LD G V+ R ++LPD ++DH +P    A+AGL   
Sbjct: 585 LITIEEGSIGGFGSHVMQTLMDNGALDGGLVRVRSMILPDEFLDHDTPTAMYARAGLDAK 644

Query: 540 HIAATVFNILGQ 551
            I A VF  LG+
Sbjct: 645 GIVAKVFEALGK 656


>gi|261213460|ref|ZP_05927741.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915067|gb|EEX81928.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 643

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAVSDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|17987781|ref|NP_540415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|225851972|ref|YP_002732205.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
           23457]
 gi|256264520|ref|ZP_05467052.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
           str. 63/9]
 gi|260563510|ref|ZP_05833996.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|384210822|ref|YP_005599904.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
 gi|384407921|ref|YP_005596542.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
 gi|384444538|ref|YP_005603257.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
 gi|21263517|sp|Q8YFM2.1|DXS_BRUME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782063|sp|C0RHE3.1|DXS_BRUMB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|17983505|gb|AAL52679.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|225640337|gb|ACO00251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis ATCC
           23457]
 gi|260153526|gb|EEW88618.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. 16M]
 gi|263094853|gb|EEZ18591.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 2
           str. 63/9]
 gi|326408468|gb|ADZ65533.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M28]
 gi|326538185|gb|ADZ86400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis M5-90]
 gi|349742534|gb|AEQ08077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis NI]
          Length = 643

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/549 (62%), Positives = 404/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD   K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|374639397|gb|AEZ55687.1| putative 1-deoxy-D-xylulose 5-phosphate synthase precursor [Salvia
           miltiorrhiza]
          Length = 713

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/555 (58%), Positives = 410/555 (73%), Gaps = 8/555 (1%)

Query: 6   QTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQ 65
           Q D LS +  R+E  YD FG GH  +SIS+GLGMAV RD+KG+++ +V+VI +    AGQ
Sbjct: 165 QVDDLSSYACRNE--YDPFGAGHGCSSISSGLGMAVARDIKGKRDRIVSVISNETTMAGQ 222

Query: 66  AYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNRPLRELR 124
            YEAM+NAGYLDS+M+VILND    S P   LD  P   + A+SS LS+LQS++  R+ R
Sbjct: 223 VYEAMSNAGYLDSNMVVILNDRHHSSNPK--LDQAPKASINAVSSTLSKLQSSQFFRKFR 280

Query: 125 EVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL 184
           EVAK +TK+IG  MHE AAK+DEYARGM+   GSTLFEELGLYYIGPVDGHN++DL+ +L
Sbjct: 281 EVAKVLTKRIGRGMHEWAAKIDEYARGMVGPPGSTLFEELGLYYIGPVDGHNIEDLLCVL 340

Query: 185 EEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTY 244
            EV +  + GPVL+HVVT++   Y   +    K        P T +     +R Q+Y+ +
Sbjct: 341 HEVASLDSMGPVLVHVVTKEE--YAVEDNQMGKVSEECVEGPFTIEAAPIRSRPQTYSDH 398

Query: 245 FAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEG 304
           FA+ALI EAE+D+D+V +HA MG  T       +   R FDVG+AEQHAVTF+AGLAC G
Sbjct: 399 FAKALITEAEIDEDIVVVHAGMGMETSFRALKDKLRDRFFDVGMAEQHAVTFSAGLACGG 458

Query: 305 LKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLP 364
           LKPFC I +SF+QRAYDQVVHDVD QK+PVRF +  AGLVG+DG TH G+FD+TFM+CLP
Sbjct: 459 LKPFCIIPASFLQRAYDQVVHDVDRQKIPVRFVLTSAGLVGSDGATHSGAFDITFMSCLP 518

Query: 365 NMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILI 424
           NM+VMAPSDE EL  MV+TAA I+DRP CFRYPRG  I    P  +   P+EVG+GR+L+
Sbjct: 519 NMIVMAPSDEIELARMVSTAADIEDRPVCFRYPRG-AIASMDPNLHLREPIEVGRGRLLV 577

Query: 425 EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITV 484
           EG+ +ALLG+G+ VQ+CL A A+L + G+ +TVADARFCKPLD  L+R L K+H+ LITV
Sbjct: 578 EGKDIALLGFGSMVQNCLRAHAILSNMGIDVTVADARFCKPLDIKLVRMLCKNHKFLITV 637

Query: 485 EEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 544
           EEGSIGGFG+HV QF++ DGLLD  +KWRP+ LPD YI+   P DQLA AGLT +HIAAT
Sbjct: 638 EEGSIGGFGAHVAQFISLDGLLDAGIKWRPITLPDNYIEGAQPNDQLAAAGLTGNHIAAT 697

Query: 545 VFNILGQTREALEIM 559
             N+LG+TR+AL +M
Sbjct: 698 ALNLLGRTRDALLLM 712


>gi|398350482|ref|YP_006395946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii USDA
           257]
 gi|390125808|gb|AFL49189.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Sinorhizobium fredii
           USDA 257]
          Length = 645

 Score =  650 bits (1676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/553 (59%), Positives = 407/553 (73%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  DL G+  NVVAVIGDGA
Sbjct: 99  IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAADLDGKSRNVVAVIGDGA 158

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 159 LSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 209

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 210 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 268 LPVLRNVRDNRR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 326

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+ EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 327 YTSVFADALVQEASLDDKIVAITAAMPSGTGLDRFAAVHPSRCFDVGIAEQHAVTFAAGL 386

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 387 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 446

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA DD P  FRYPRG G+GVELP   +G  L++GKG
Sbjct: 447 ASLPGFVVMAAADEAELKHMVRTAAAYDDGPISFRYPRGEGVGVELP--ERGEILQIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLD  LIR LA+ HEV
Sbjct: 505 RIIKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDQELIRQLARHHEV 564

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGF SHV+ FLA++GLLDG +K RP+VLPD +++   P    A AGL  + 
Sbjct: 565 LITIEEGAIGGFASHVLHFLAEEGLLDGGLKVRPMVLPDIWMEQAKPESMYASAGLDRAG 624

Query: 541 IAATVFNILGQTR 553
           I +TVF  LGQ +
Sbjct: 625 IVSTVFKALGQKQ 637


>gi|118589273|ref|ZP_01546679.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stappia aggregata IAM
           12614]
 gi|118437973|gb|EAV44608.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia aggregata IAM
           12614]
          Length = 639

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/550 (60%), Positives = 401/550 (72%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR+ES +D FG  HSSTSISAGLGMA GRDLKG  NNV+AVIGDGA
Sbjct: 94  IRTLRQGDGLSGFTKRAESPFDPFGAAHSSTSISAGLGMAAGRDLKGGSNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG+L S +IVILNDN  +S+         PPVGA+S+ L++L S    
Sbjct: 154 MSAGMAYEAMNNAGHLGSRLIVILNDN-DMSI--------APPVGAMSAYLAKLVSGPTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +  R+ AK + K +  P+ E AA+ +EYARG  +G   TLFEELG YY+GPVDGHN++ L
Sbjct: 205 QTFRDAAKNLVKNLPKPVFEKAARAEEYARGFWTGG--TLFEELGFYYVGPVDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T   GP+LIH VT+KG+GY  AE A DKYHGVAKFD  TGKQ K  A   S
Sbjct: 263 LPVLKNVRDTHH-GPILIHAVTQKGKGYAPAEGAKDKYHGVAKFDVVTGKQAKPKANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA +LI EAE D  V+AI AAM  GTGL+LF   +P R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTNVFATSLIKEAETDDRVLAITAAMPDGTGLDLFGEAYPKRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD  F+
Sbjct: 382 ATEGFKPFCAIYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGLVGADGPTHAGAFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP  VVMA SDE EL HMVATA A D+ P  FRYPRG G+G+++P   +G  LE+GKG
Sbjct: 442 TCLPGFVVMAASDEVELRHMVATAVAYDEGPISFRYPRGEGVGLDMP--ERGSVLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  EG +VALL +G  +  CL A+  L++ GL  TVADARF KPLD  +IR LA+ HEV
Sbjct: 500 VIRREGTKVALLNFGGRMSECLKAADELDAAGLSTTVADARFAKPLDMDMIRRLAREHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ +EEGS GGFGSHV+  LA++GLLD  +K R L LPD Y+DH  P    A+AGL    
Sbjct: 560 LVMIEEGSAGGFGSHVLTRLAEEGLLDNGLKVRALALPDAYLDHDKPDAMYARAGLNSDG 619

Query: 541 IAATVFNILG 550
           I  TVF  LG
Sbjct: 620 ILKTVFTALG 629


>gi|148560626|ref|YP_001258456.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
 gi|166198603|sp|A5VP09.1|DXS_BRUO2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148371883|gb|ABQ61862.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella ovis ATCC 25840]
          Length = 643

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/549 (62%), Positives = 404/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TV DARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVVDARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|150395717|ref|YP_001326184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium medicae
           WSM419]
 gi|150027232|gb|ABR59349.1| deoxyxylulose-5-phosphate synthase [Sinorhizobium medicae WSM419]
          Length = 637

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/553 (59%), Positives = 408/553 (73%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L G+  NV+AVIGDGA
Sbjct: 91  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDGKSRNVIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 151 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 202 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 260 LPVLRNVRDN-AKGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL  EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 319 YTSVFADALTLEASLDDKIVAITAAMPSGTGLDRFASVHPSRCFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 379 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA DD P  FRYPRG G+GVELP   +G  LE+GKG
Sbjct: 439 ATLPGFVVMAAADEAELKHMVRTAAAYDDGPISFRYPRGEGVGVELP--ERGEILEIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 497 RVIKQGSKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEV 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGF SHV+QFLA++GL+DG +K RP+++PD +++   P     +AGL  + 
Sbjct: 557 LITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMIMPDVWMEQAKPEAMYTRAGLDRAG 616

Query: 541 IAATVFNILGQTR 553
           I +TVF  LGQ R
Sbjct: 617 IVSTVFKALGQKR 629


>gi|261317112|ref|ZP_05956309.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
 gi|265988149|ref|ZP_06100706.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
           M292/94/1]
 gi|340790077|ref|YP_004755541.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           B2/94]
 gi|261296335|gb|EEX99831.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis B2/94]
 gi|264660346|gb|EEZ30607.1| 1-deoxyxylulose-5-phosphate synthase [Brucella pinnipedialis
           M292/94/1]
 gi|340558535|gb|AEK53773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           B2/94]
          Length = 643

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV +FD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNEFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|148260827|ref|YP_001234954.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
 gi|338979876|ref|ZP_08631214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
 gi|146402508|gb|ABQ31035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium cryptum JF-5]
 gi|338209213|gb|EGO96994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium sp. PM]
          Length = 647

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/553 (59%), Positives = 406/553 (73%), Gaps = 15/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR--KNNVVAVIGD 58
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV RDLK    K +V+AVIGD
Sbjct: 92  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVARDLKDESPKRHVIAVIGD 151

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GAM+AG AYEAMNNAG   S MIVILNDN  +S+         PPVGA+S+ LSRL S+R
Sbjct: 152 GAMSAGMAYEAMNNAGASKSRMIVILNDN-DMSI--------APPVGAMSAYLSRLISSR 202

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               +R+ A  + K+    +   A + +EYARG+++G   TLFEELG YY+GP+DGHN+D
Sbjct: 203 SFLSIRDFAARMAKRFPRTLERTAKRAEEYARGILTGG--TLFEELGFYYVGPIDGHNLD 260

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+ +L  +++     P+L+HVVT+KG+GY  AE +ADKYHGV+KF+  TG+Q K+    
Sbjct: 261 HLLPVLRNLRDIDGDEPILLHVVTQKGKGYAPAEASADKYHGVSKFNVVTGEQTKAPPGP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  FA+ALIAEAE + +VVA+ AAM  GTGL+ F +RFP RCFDVGIAEQHAVTFAA
Sbjct: 321 PSYTKVFAQALIAEAEHNPNVVAVTAAMPSGTGLDAFAKRFPDRCFDVGIAEQHAVTFAA 380

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EG+ PFCAIYS+F+QRAYDQVVHDV +Q LPVRFAMDRAGLVGADG TH G++D+ 
Sbjct: 381 GMATEGMAPFCAIYSTFLQRAYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGAYDLA 440

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ CLP MV+MAPSDEAEL + VATAAAIDDRPS FRYPRG G GV+LP   +G P E+G
Sbjct: 441 YLGCLPGMVIMAPSDEAELMNCVATAAAIDDRPSAFRYPRGEGTGVQLP--ARGTPWEIG 498

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRI+ EG +VA+L  G  +   L A+  L + G   TVADARF KPLD AL+  LA+ H
Sbjct: 499 KGRIVREGSKVAVLALGPRLAEALKAADELAARGFPATVADARFMKPLDTALVDQLARHH 558

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EVLIT+E+GS GGFG+ V   LA  G  D  +++RP+ LPDR+IDH SPA QL  AGLT 
Sbjct: 559 EVLITIEDGSSGGFGAAVGHHLAWSGAFDSGLRFRPMTLPDRFIDHNSPAGQLIDAGLTA 618

Query: 539 SHIAATVFNILGQ 551
             I A     LG+
Sbjct: 619 KDIVAHALGALGR 631


>gi|265994395|ref|ZP_06106952.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
           str. Ether]
 gi|262765508|gb|EEZ11297.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 3
           str. Ether]
          Length = 643

 Score =  649 bits (1674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA S+EAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASNEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|420240106|ref|ZP_14744367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
 gi|398077668|gb|EJL68635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF080]
          Length = 639

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/553 (59%), Positives = 406/553 (73%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  DL G K NV+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAADLSGSKRNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R++ K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDLGKKLTAYLGKNVDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q KS     S
Sbjct: 263 LPVLRNVRD-NARGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKSKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F EAL+ EA +D+ +V + AAM  GTG++     FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFGEALVQEASLDEKIVGVTAAMPNGTGIDKLADVFPARTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD TF+
Sbjct: 382 AAEGYKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGLVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVELP   +G  LE+GKG
Sbjct: 442 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGQILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G +VALL +GT ++ CL A+  L++ GL  TVADARF KPLD  LIR LA+ HEV
Sbjct: 500 RVVKQGAKVALLSFGTRLKECLLAAEDLDAAGLSTTVADARFAKPLDQELIRQLARHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGFGSHV+QFLA +GLLD  +K R LVLPD ++   SP    A+AGL  + 
Sbjct: 560 LITIEEGAVGGFGSHVLQFLATEGLLDNGLKIRSLVLPDIWMQQASPDAMYAKAGLDRAG 619

Query: 541 IAATVFNILGQTR 553
           I +TVF  LGQT+
Sbjct: 620 IVSTVFKTLGQTQ 632


>gi|261324565|ref|ZP_05963762.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
 gi|261300545|gb|EEY04042.1| 1-deoxyxylulose-5-phosphate synthase [Brucella neotomae 5K33]
          Length = 643

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/549 (62%), Positives = 404/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I   VF  L
Sbjct: 619 IVRAVFAAL 627


>gi|62289421|ref|YP_221214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. 9-941]
 gi|189023672|ref|YP_001934440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
 gi|260545827|ref|ZP_05821568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
           8038]
 gi|260761258|ref|ZP_05873601.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|376273822|ref|YP_005152400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus A13334]
 gi|423167409|ref|ZP_17154112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI435a]
 gi|423170215|ref|ZP_17156890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI474]
 gi|423173705|ref|ZP_17160376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI486]
 gi|423177010|ref|ZP_17163656.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI488]
 gi|423179648|ref|ZP_17166289.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI010]
 gi|423182778|ref|ZP_17169415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI016]
 gi|423186279|ref|ZP_17172893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI021]
 gi|423189417|ref|ZP_17176027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI259]
 gi|75497245|sp|Q57ET1.1|DXS_BRUAB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229813263|sp|B2S9T6.1|DXS_BRUA1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|62195553|gb|AAX73853.1| Dxs, deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. 9-941]
 gi|189019244|gb|ACD71966.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus S19]
 gi|260097234|gb|EEW81109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus NCTC
           8038]
 gi|260671690|gb|EEX58511.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|363401428|gb|AEW18398.1| 1-deoxyxylulose-5-phosphate synthase [Brucella abortus A13334]
 gi|374540843|gb|EHR12342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI435a]
 gi|374541451|gb|EHR12946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI486]
 gi|374542451|gb|EHR13940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI474]
 gi|374551167|gb|EHR22602.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI010]
 gi|374551624|gb|EHR23058.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI016]
 gi|374552760|gb|EHR24183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI488]
 gi|374557336|gb|EHR28733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI259]
 gi|374557958|gb|EHR29352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus bv. 1
           str. NI021]
          Length = 643

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/549 (62%), Positives = 405/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGF SHV+QFLA DGLLD  +K R L+LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|398829536|ref|ZP_10587733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
 gi|398216463|gb|EJN03009.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phyllobacterium sp. YR531]
          Length = 639

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/551 (61%), Positives = 401/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES+YD FG  HSSTSISAGLGMAV  DL G K NVV+VIGDGA
Sbjct: 94  IRTLRQEGGLSGFTKRSESDYDPFGAAHSSTSISAGLGMAVASDLAGIKRNVVSVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 154 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLVSGKAY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R  RE AK + K++   + E A + +EYAR   +G   T+FEELG YY+GP+DGHN+D L
Sbjct: 205 RSFRETAKQLAKKLPKFLQEKARRSEEYARAFWTGG--TMFEELGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T   GPVLIHVVT+KG+GY  AE +ADKYHGV KFD  TG Q K  A   S
Sbjct: 263 LPVLKNVRDT-MDGPVLIHVVTQKGKGYAPAEASADKYHGVNKFDVITGAQAKPPANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA +LI EA  D  +VA+ AAM GGTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTKIFATSLIEEARHDDRIVAVTAAMPGGTGLDLFGEVFPDRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPF AIYS+F+QR YDQVVHDV LQ LPVRF +DRAGLVGADG TH GSFD  F+
Sbjct: 382 ASEGLKPFAAIYSTFLQRGYDQVVHDVSLQNLPVRFPIDRAGLVGADGATHAGSFDTGFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D  P  FRYPRG+GIG+ELP   +G  LE+GKG
Sbjct: 442 AALPGFVVMAASDEAELRHMVRTAAEYDAGPISFRYPRGDGIGIELP--ERGSILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R + EG +VALL +GT +  CL A+  L ++GL  TVADARF KPLD  LIR LA+ HEV
Sbjct: 500 RTVREGSKVALLSFGTRLAECLTAADELSASGLSTTVADARFAKPLDEDLIRRLAREHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG+IGGF SHV+ FL++DGLLD  ++ R LVLPD Y+DH  P    A+AGL  + 
Sbjct: 560 LVTVEEGAIGGFASHVLHFLSRDGLLDHGLRVRTLVLPDIYLDHAKPEVLYARAGLDSAG 619

Query: 541 IAATVFNILGQ 551
           I   VF  LG+
Sbjct: 620 IVQAVFGALGR 630


>gi|265990565|ref|ZP_06103122.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263001349|gb|EEZ13924.1| 1-deoxyxylulose-5-phosphate synthase [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 643

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/549 (62%), Positives = 404/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  +  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHNDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGFGSHV+QFLA DGLLD   K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFGSHVLQFLATDGLLDRGFKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|326404221|ref|YP_004284303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
           AIU301]
 gi|325051083|dbj|BAJ81421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidiphilium multivorum
           AIU301]
          Length = 647

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/553 (59%), Positives = 406/553 (73%), Gaps = 15/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR--KNNVVAVIGD 58
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV RDLK    K +V+AVIGD
Sbjct: 92  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVARDLKDESPKRHVIAVIGD 151

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GAM+AG AYEAMNNAG   S MIVILNDN  +S+         PPVGA+S+ LSRL S+R
Sbjct: 152 GAMSAGMAYEAMNNAGASKSRMIVILNDN-DMSI--------APPVGAMSAYLSRLISSR 202

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               +R+ A  + K+    +   A + +EYARG+++G   TLFEELG YY+GP+DGHN+D
Sbjct: 203 SFLSIRDFAARMAKRFPRTLERTAKRAEEYARGILTGG--TLFEELGFYYVGPIDGHNLD 260

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+ +L  +++     P+L+HVVT+KG+GY  AE +ADKYHGV+KF+  TG+Q K+    
Sbjct: 261 HLLPVLRNLRDIDGDEPILLHVVTQKGKGYAPAEASADKYHGVSKFNVVTGEQTKAPPGP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  FA+ALIAEAE + +VVA+ AAM  GTGL+ F +RFP RCFDVGIAEQHAVTFAA
Sbjct: 321 PSYTKVFAQALIAEAEHNPNVVAVTAAMPSGTGLDAFGKRFPDRCFDVGIAEQHAVTFAA 380

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EG+ PFCAIYS+F+QRAYDQVVHDV +Q LPVRFAMDRAGLVGADG TH G++D+ 
Sbjct: 381 GMATEGMAPFCAIYSTFLQRAYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGAYDLA 440

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ CLP MV+MAPSDEAEL + VATAAAIDDRPS FRYPRG G GV+LP   +G P E+G
Sbjct: 441 YLGCLPGMVIMAPSDEAELMNCVATAAAIDDRPSAFRYPRGEGTGVQLP--ARGTPWEIG 498

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRI+ EG +VA+L  G  +   L A+  L + G   TVADARF KPLD AL+  LA+ H
Sbjct: 499 KGRIVREGSKVAVLALGPRLAEALKAADELAARGFPATVADARFMKPLDTALVDQLARHH 558

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EVLIT+E+GS GGFG+ V   LA  G  D  +++RP+ LPDR+IDH SPA QL  AGLT 
Sbjct: 559 EVLITIEDGSSGGFGAAVGHHLAWSGAFDSGLRFRPMTLPDRFIDHNSPAGQLIDAGLTA 618

Query: 539 SHIAATVFNILGQ 551
             I A     LG+
Sbjct: 619 KDIVAHALGALGR 631


>gi|90420127|ref|ZP_01228035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335461|gb|EAS49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 638

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/550 (60%), Positives = 406/550 (73%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF KR+ESEYD FG GHSSTSISAGLGMAV RDL G KNNV+AVIGDGA
Sbjct: 94  MRTVRQEGGLSGFAKRTESEYDPFGAGHSSTSISAGLGMAVARDLSGGKNNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 154 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLVSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR+ AK +++ + G   E A + +EY RG  +G   T+FEELG YY+GP+DGH++D L
Sbjct: 205 RSLRDQAKSISQHLPGFFREGARRTEEYTRGFFTGG--TMFEELGFYYVGPIDGHDLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ KT GP+L+HVVT+KG+GY  AE +ADKYHGV+KFD  TG Q KS     S
Sbjct: 263 LPVLKNVRDAKT-GPILVHVVTKKGKGYGPAENSADKYHGVSKFDVITGAQAKSKGNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EA+ D  +VA++AAM  GTGL+ F   FP R FDVGIAEQHAVTF AGL
Sbjct: 322 YTGVFADSLIQEAQDDDRIVAVNAAMPNGTGLDKFAEIFPKRTFDVGIAEQHAVTFCAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPF AIYS+F+QRAYDQ+VHDV +QKLPVRFA+DRAG VGADGPTH GSFD  F+
Sbjct: 382 ASDGYKPFAAIYSTFLQRAYDQIVHDVAIQKLPVRFAIDRAGYVGADGPTHAGSFDTGFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP MVVMA +DEAEL HMV TAA  D+ P  FRYPRGNG GV++P   +G  LE+GKG
Sbjct: 442 CPLPGMVVMAAADEAELRHMVRTAAVYDEGPISFRYPRGNGTGVDMP--ERGQALEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L +GT +   +AA+  LE+ GL  TVADARF KPLD  LI  LA++HEV
Sbjct: 500 RIVREGTKVAILSFGTRLADSVAAAEELETFGLSTTVADARFAKPLDTELIGRLARNHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+ GGF S V++ LA  GLLD  +K RPL++PDR++DH +P   + QA L    
Sbjct: 560 LITVEEGASGGFASQVLEHLAARGLLDHGLKIRPLIMPDRFLDHAAPETMIRQAALDRQG 619

Query: 541 IAATVFNILG 550
           I  TVF  LG
Sbjct: 620 IVDTVFRALG 629


>gi|378825151|ref|YP_005187883.1| hypothetical protein SFHH103_00558 [Sinorhizobium fredii HH103]
 gi|365178203|emb|CCE95058.1| dxs [Sinorhizobium fredii HH103]
          Length = 871

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/551 (59%), Positives = 406/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  DL G+  NV+AVIGDGA
Sbjct: 325 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAADLDGKSRNVIAVIGDGA 384

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 385 LSAGMAYEALNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLASGRTY 435

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 436 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 493

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 494 LPVLRNVRDNRR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 552

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+ EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 553 YTSVFADALVQEASLDDKIVAITAAMPSGTGLDRFAAVHPSRCFDVGIAEQHAVTFAAGL 612

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 613 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 672

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA DD P  FRYPRG G+GVELP   +G  L +GKG
Sbjct: 673 ASLPGFVVMAAADEAELKHMVRTAAAYDDGPISFRYPRGEGVGVELP--ERGEILPIGKG 730

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 731 RIVKQGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHELIRQLARHHEV 790

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEG+IGGF SHV+ FLA++GLLDG +K RP+VLPD +++   P    A AGL  + 
Sbjct: 791 LVTIEEGAIGGFASHVLHFLAEEGLLDGGLKVRPMVLPDIWMEQAKPESMYAAAGLDRAG 850

Query: 541 IAATVFNILGQ 551
           I +TVF  LGQ
Sbjct: 851 IVSTVFKALGQ 861


>gi|254501985|ref|ZP_05114136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
 gi|222438056|gb|EEE44735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
          Length = 631

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/550 (61%), Positives = 398/550 (72%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YD FGT HSSTSISAGLGMA  RDLK   NNV+AVIGDGA
Sbjct: 86  IRTLRQPGGLSGFTKRSESIYDPFGTAHSSTSISAGLGMAAARDLKDGDNNVIAVIGDGA 145

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG+L S ++VILNDN  +S+         PPVGA+S+ L++L S    
Sbjct: 146 MSAGMAYEAMNNAGHLGSRLVVILNDN-DMSIA--------PPVGAMSAYLAKLVSGPTY 196

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + LR  AK + K     + E AA+ +EYARG  +G   TLFEELG YY+GPVDGHN++ L
Sbjct: 197 QSLRGAAKSIVKNFPKQLAEKAARAEEYARGFWTGG--TLFEELGFYYVGPVDGHNLEHL 254

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ V++T   GPVLIH VT+KG+GY  AE A DKYHGVAKFD  TGKQ K  A   S
Sbjct: 255 LPILKNVRDTHN-GPVLIHAVTQKGKGYAPAEGAKDKYHGVAKFDVVTGKQSKPKANAPS 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA +LI EAE D+ VVAI AAM  GTGLNLF   FP R +DVGIAEQHAVTFAAG+
Sbjct: 314 YTNVFATSLIREAEEDEKVVAITAAMPDGTGLNLFGEAFPERTYDVGIAEQHAVTFAAGM 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQV+HDV LQ LPVRF +DRAGLVGADG TH G+FD  ++
Sbjct: 374 ATEGYKPFAAIYSTFLQRAYDQVIHDVALQGLPVRFPIDRAGLVGADGATHAGAFDTAYL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           +CLP  VVMA SDEAEL HMVATA A D+ P  FRYPRG G+G+++P   +G  LE+GKG
Sbjct: 434 SCLPGFVVMAASDEAELRHMVATAVAYDEGPISFRYPRGEGVGLDMP--ERGTVLEIGKG 491

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG +VALL +G  +  CL A+  L++ GL  TVADARF KPLD  LIR LA+ HEV
Sbjct: 492 IVRREGTKVALLSFGGRMAECLKAADELDAAGLSTTVADARFAKPLDMDLIRRLAREHEV 551

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFGSHV+  LAQ+G LD  +K R L LPD Y DH  PA   A AGL    
Sbjct: 552 LVTIEEGSVGGFGSHVLSALAQEGALDAGLKIRTLTLPDTYQDHDKPASMYASAGLDKEG 611

Query: 541 IAATVFNILG 550
           I  TVF  LG
Sbjct: 612 ILTTVFTALG 621


>gi|227821074|ref|YP_002825044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium fredii
           NGR234]
 gi|227340073|gb|ACP24291.1| 1-deoxy-D-xylulose 5-phosphate synthase [Sinorhizobium fredii
           NGR234]
          Length = 645

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/551 (60%), Positives = 405/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  DL G+  NV+AVIGDGA
Sbjct: 99  IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAADLDGKSRNVIAVIGDGA 158

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 159 LSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 209

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 210 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 268 LPVLRNVRDNRR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 326

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL  EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 327 YTSVFADALTQEASLDDKIVAITAAMPHGTGLDRFAAVHPSRCFDVGIAEQHAVTFAAGL 386

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 387 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 446

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA DD P  FRYPRG G+GVELP   +G  LE+GKG
Sbjct: 447 ASLPGFVVMAAADEAELKHMVRTAAAYDDGPISFRYPRGEGVGVELP--ERGEILEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 505 RIIKQGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHELIRQLARHHEV 564

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGF SHV+ FLA++GLLDG +K RP+VLPD +++   P    A AGL    
Sbjct: 565 LITIEEGAIGGFASHVLHFLAEEGLLDGGLKVRPMVLPDIWMEQAKPESMYAAAGLDRVG 624

Query: 541 IAATVFNILGQ 551
           I +TVF  LGQ
Sbjct: 625 IVSTVFKALGQ 635


>gi|82699348|ref|YP_413922.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella melitensis biovar
           Abortus 2308]
 gi|237814909|ref|ZP_04593907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
           A]
 gi|118595496|sp|Q2YMF0.1|DXS_BRUA2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82615449|emb|CAJ10418.1| Transketolase, N terminal:Transketolase, central
           region:Transketolase, C
           terminal:Deoxyxylulose-5-phosphate synthase [Brucella
           melitensis biovar Abortus 2308]
 gi|237789746|gb|EEP63956.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella abortus str. 2308
           A]
          Length = 643

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/549 (62%), Positives = 404/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR L + HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLVREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGF SHV+QFLA DGLLD  +K R L+LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|61656095|gb|AAX49358.1| 1-deoxy-D-xylulose 5-phosphate synthase 2 [Zea mays]
          Length = 424

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/423 (74%), Positives = 361/423 (85%), Gaps = 1/423 (0%)

Query: 137 PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNTKTTGPV 196
           P HE+AAKVDEYARGMIS SGS+LFEELGLYYIGPVDGH V+DLV I E+VK+    GPV
Sbjct: 1   PTHEVAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDLVTIFEKVKSMPAPGPV 60

Query: 197 LIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEALIAEAEVD 256
           LIH+VTEKG+GYP AE AAD+ HGV KF+PATG+Q KS + T SYT YFAE+LI EAE D
Sbjct: 61  LIHIVTEKGKGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLSYTQYFAESLIREAESD 120

Query: 257 KDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFM 316
           + VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+
Sbjct: 121 EKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL 180

Query: 317 QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVVMAPSDEAE 376
           QR YDQVVHDVDLQ+LPVRFA+DRAGLVGADGPTHCG+FDV +MACLPNMVVMAP+DEAE
Sbjct: 181 QRGYDQVVHDVDLQRLPVRFALDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAE 240

Query: 377 LFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGE-RVALLGYG 435
           L HMVATAAAIDDRPSCFR+PRGNG+G  LPPGNKG+ LEVG+GR+L+ G  RVALLGYG
Sbjct: 241 LMHMVATAAAIDDRPSCFRFPRGNGVGAALPPGNKGVALEVGRGRVLVGGGTRVALLGYG 300

Query: 436 TAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSH 495
             VQ+CL A+  L+ + + +T ADARFCKPLD ALIR LA  HEVLIT EEGSIGGFGSH
Sbjct: 301 AMVQACLKAAEALKEHDVYVTAADARFCKPLDTALIRELAAEHEVLITAEEGSIGGFGSH 360

Query: 496 VVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 555
           V  +L+  GLLDG +K R + LPDRYIDHG+P DQ+ +AGLTP HIAATV ++LG+  EA
Sbjct: 361 VAHYLSLTGLLDGPLKLRSMFLPDRYIDHGAPQDQIEEAGLTPRHIAATVLSLLGRPLEA 420

Query: 556 LEI 558
           +++
Sbjct: 421 MQL 423


>gi|261315322|ref|ZP_05954519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           M163/99/10]
 gi|261304348|gb|EEY07845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brucella pinnipedialis
           M163/99/10]
          Length = 643

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/549 (62%), Positives = 404/549 (73%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L G K NV+AVIGDG+
Sbjct: 93  IRTLRQAGGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVASELSGEKRNVIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGALDARLIVILNDN-DMSI--------APPTGAMSAYLARLVSGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE AK V +++   + + A K +EYAR   +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSVREAAKQVAQKLPKFLQDKARKSEEYARAFFTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++T+  GPVLIHVVT+KG+GY  AE AADKYHGV +FD  TGKQ K  A   S
Sbjct: 262 LPVLKNVRDTQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNEFDVITGKQAKPPANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  +LI EA  D  +VA+ AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTKIFGTSLIEEARHDDKIVAVTAAMPTGTGLDLFGEAFPKRVFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAGLVGADGPTH GSFD  F+
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGLVGADGPTHAGSFDTGFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA SDEAEL HMV TAA  D+ P  FRYPRG+G+GV+LP   +G  LE+GKG
Sbjct: 441 AALPGFVVMAASDEAELRHMVRTAAEYDEGPISFRYPRGDGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +Q CLAA+  L + GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 499 RIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEG++GGF SHV+QFLA DGLLD  +K R L LPD Y DHG P    A+AGL  + 
Sbjct: 559 LVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTG 618

Query: 541 IAATVFNIL 549
           I  TVF  L
Sbjct: 619 IVRTVFAAL 627


>gi|433612645|ref|YP_007189443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           GR4]
 gi|429550835|gb|AGA05844.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           GR4]
          Length = 645

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/551 (59%), Positives = 407/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L G+  NV+AVIGDGA
Sbjct: 99  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDGKSRNVIAVIGDGA 158

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 159 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 209

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 210 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 268 LPVLRNVRDN-AKGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 326

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTT FA+AL  EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 327 YTTVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGL 386

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 387 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 446

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVELP   +G  L +GKG
Sbjct: 447 ATLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 505 RIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEV 564

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGF SHV+QFLA++GL+DG +K RP+V+PD +++   P    A+AGL  + 
Sbjct: 565 LITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAG 624

Query: 541 IAATVFNILGQ 551
           I +TVF  LGQ
Sbjct: 625 IVSTVFKALGQ 635


>gi|418404560|ref|ZP_12978014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           CCNWSX0020]
 gi|359501479|gb|EHK74087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           CCNWSX0020]
          Length = 658

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 407/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L G+  NV+AVIGDGA
Sbjct: 112 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDGKSRNVIAVIGDGA 171

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 172 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 222

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 223 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 280

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 281 LPVLRNVRDN-AKGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 339

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL  EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 340 YTSVFADALTQEASLDDKIVAITAAMPSGTGLDRFASVHPSRCFDVGIAEQHAVTFAAGL 399

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 400 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 459

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVELP   +G  L +GKG
Sbjct: 460 ATLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKG 517

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 518 RIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEV 577

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGF SHV+QFLA++GL+DG +K RP+V+PD +++   P    A+AGL  + 
Sbjct: 578 LITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAG 637

Query: 541 IAATVFNILGQ 551
           I +TVF  LGQ
Sbjct: 638 IVSTVFKALGQ 648


>gi|407775204|ref|ZP_11122499.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
           profundimaris WP0211]
 gi|407281629|gb|EKF07190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassospira
           profundimaris WP0211]
          Length = 639

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/553 (58%), Positives = 398/553 (71%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG-RKNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSESEYD FG GHSSTSISAGLGMAV   L   ++ NV+AVIGDG
Sbjct: 94  IRTIRQGGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVANQLSDDKRKNVIAVIGDG 153

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +M+AG AYEAMNNA   D  +IVILNDN  +S+         PPVG++S  LSRL S + 
Sbjct: 154 SMSAGMAYEAMNNAAATDQRLIVILNDN-DMSIA--------PPVGSMSGYLSRLISGKG 204

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            + LR  AKG+TK +   + E A K++EY RGM++G   TLFEE+G +Y+GP+DGHN+D 
Sbjct: 205 YQGLRNAAKGLTKHLPRQIEEAARKLEEYTRGMVTGG--TLFEEMGFFYVGPIDGHNMDH 262

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V++    GP+LIH VT+KG+GY  AE AADKYHGVAKFD  TGKQ K +    
Sbjct: 263 LLPVLKNVRDADVDGPILIHAVTQKGKGYGPAENAADKYHGVAKFDVVTGKQAKPTPNAP 322

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  + E L+  AE D+ V AI AAM  GTG+N+F   FP R FDVGIAEQHAVTFAAG
Sbjct: 323 SYTKVYGETLVKLAEKDEKVTAITAAMPSGTGVNIFADHFPDRAFDVGIAEQHAVTFAAG 382

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPFC +YS+F+QR YDQVVHDV +Q LPVRFAMDRAGLVGADG TH G++D+ +
Sbjct: 383 MACEGYKPFCTLYSTFLQRGYDQVVHDVAIQNLPVRFAMDRAGLVGADGATHAGAYDIAY 442

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + CLPN V+MA +DEAEL HM  TA AIDDRPS FRYPRG G+GVE+P   +G  LE+GK
Sbjct: 443 LGCLPNFVLMAAADEAELVHMTTTAWAIDDRPSAFRYPRGEGVGVEMPA--EGKVLEIGK 500

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG ++A+L YGT +   L A+  L + GL  TVADARF KPLDH LI  LA++HE
Sbjct: 501 GRILREGGKIAILSYGTRLAEALIAAEDLAARGLPATVADARFAKPLDHELIADLARNHE 560

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EEGSI GFG+ V+Q +A  GLLD  +K R + LPD  IDH  P  Q  +AGL   
Sbjct: 561 VLITIEEGSINGFGAMVLQHMAGHGLLDNGLKIRTMALPDALIDHDKPEIQYEKAGLDAK 620

Query: 540 HIAATVFNILGQT 552
            I  T    LG +
Sbjct: 621 AIVKTALGALGMS 633


>gi|92116388|ref|YP_576117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
           X14]
 gi|118595592|sp|Q1QQ40.1|DXS_NITHX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91799282|gb|ABE61657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrobacter hamburgensis
           X14]
          Length = 668

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/552 (59%), Positives = 405/552 (73%), Gaps = 14/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ES+YD FG  HSSTSISA LGMAV RDL G KNNV+AVIGDGA
Sbjct: 120 IRTLRTGGGLSGFTKRTESDYDPFGAAHSSTSISASLGMAVARDLSGGKNNVIAVIGDGA 179

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG ++S +IVILNDN  +S+         PPVGA+S+ LSRL S +  
Sbjct: 180 MSAGMAYEAMNNAGAMNSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLYSGKTY 230

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + K +   + + A +V+EY+RG +  SG TLFEELG YY+GP+DGHN+D L
Sbjct: 231 RSLREAAKQLGKHLPKMIADRAERVEEYSRGFMVNSG-TLFEELGFYYVGPIDGHNLDHL 289

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +  GP+L+HVVT+KG+GY  AE AADKYH V KFD +TG Q KS     +
Sbjct: 290 LPVLKNVRDMEN-GPILLHVVTQKGKGYGPAEAAADKYHAVVKFDVSTGAQSKSKPNAPA 348

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F ++L+ EAE D  ++AI AAM  GTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 349 YQNVFGQSLVKEAEKDDKIIAITAAMPSGTGVDIFNKAFPKRTFDVGIAEQHAVTFAAGL 408

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD  ++
Sbjct: 409 ATEGFKPFCAIYSTFLQRGYDQIVHDVAIQSLPVRFAIDRAGLVGADGATHAGSFDNAYL 468

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN V+MA SDEAEL HMVAT  AI+DRPS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 469 GCLPNFVIMAASDEAELVHMVATQVAINDRPSAVRYPRGEGRGVEMP--EVGVPLPIGKG 526

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL  GT +  C  A+  L ++GL  T+ADARF KPLD  L+  LA+ H+V
Sbjct: 527 RIVRQGSKVALLSLGTRLAECEKAADELAAHGLSTTIADARFMKPLDVDLVLKLARDHDV 586

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EEGSIGGFGSHV+Q LA+ G LD G V+ R +VLPD ++DH +P    A  GL   
Sbjct: 587 LITIEEGSIGGFGSHVMQTLAEHGALDSGQVRVRAMVLPDEFLDHDTPNAMYASVGLDDR 646

Query: 540 HIAATVFNILGQ 551
            I A VF  LG+
Sbjct: 647 GIVAKVFEALGK 658


>gi|15964633|ref|NP_384986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           1021]
 gi|334315344|ref|YP_004547963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           AK83]
 gi|384528590|ref|YP_005712678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           BL225C]
 gi|21263533|sp|Q92RJ1.1|DXS_RHIME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|15073811|emb|CAC45452.1| Probable 1-deoxyxylulose-5-phosphate synthase [Sinorhizobium
           meliloti 1021]
 gi|333810766|gb|AEG03435.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           BL225C]
 gi|334094338|gb|AEG52349.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           AK83]
          Length = 645

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 407/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L G+  NV+AVIGDGA
Sbjct: 99  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDGKSRNVIAVIGDGA 158

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 159 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 209

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 210 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 268 LPVLRNVRDN-AKGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 326

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL  EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 327 YTSVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGL 386

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 387 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 446

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVELP   +G  L +GKG
Sbjct: 447 ATLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 505 RIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEV 564

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGF SHV+QFLA++GL+DG +K RP+V+PD +++   P    A+AGL  + 
Sbjct: 565 LITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAG 624

Query: 541 IAATVFNILGQ 551
           I +TVF  LGQ
Sbjct: 625 IVSTVFKALGQ 635


>gi|384534992|ref|YP_005719077.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
           [Sinorhizobium meliloti SM11]
 gi|336031884|gb|AEH77816.1| probabable 1-deoxyxylulose-5-phosphate synthase protein
           [Sinorhizobium meliloti SM11]
          Length = 658

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 407/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L G+  NV+AVIGDGA
Sbjct: 112 IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDGKSRNVIAVIGDGA 171

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 172 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 222

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 223 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 280

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 281 LPVLRNVRDN-AKGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 339

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL  EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 340 YTSVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGL 399

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 400 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 459

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVELP   +G  L +GKG
Sbjct: 460 ATLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKG 517

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 518 RIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEV 577

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGF SHV+QFLA++GL+DG +K RP+V+PD +++   P    A+AGL  + 
Sbjct: 578 LITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAG 637

Query: 541 IAATVFNILGQ 551
           I +TVF  LGQ
Sbjct: 638 IVSTVFKALGQ 648


>gi|407719744|ref|YP_006839406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           Rm41]
 gi|407317976|emb|CCM66580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sinorhizobium meliloti
           Rm41]
          Length = 645

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 407/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L G+  NV+AVIGDGA
Sbjct: 99  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDGKSRNVIAVIGDGA 158

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 159 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 209

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +REV K +T  +G  +     +  E+ARG ++G   TLFEE+G Y+IGP+DGH+ D L
Sbjct: 210 MGIREVGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TLFEEMGFYHIGPIDGHSFDHL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q K+     +
Sbjct: 268 LPVLRNVRDN-AKGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPA 326

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL  EA +D  +VAI AAM  GTGL+ F    P+RCFDVGIAEQHAVTFAAGL
Sbjct: 327 YTSVFADALTQEASLDDKIVAITAAMPSGTGLDKFASVHPSRCFDVGIAEQHAVTFAAGL 386

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD T++
Sbjct: 387 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTYL 446

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVELP   +G  L +GKG
Sbjct: 447 ATLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGEILAIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 505 RIVKQGNKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEV 564

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGF SHV+QFLA++GL+DG +K RP+V+PD +++   P    A+AGL  + 
Sbjct: 565 LITIEEGAVGGFASHVLQFLAEEGLIDGGLKVRPMVMPDIWMEQAKPEAMYARAGLDRAG 624

Query: 541 IAATVFNILGQ 551
           I +TVF  LGQ
Sbjct: 625 IVSTVFKALGQ 635


>gi|114706808|ref|ZP_01439708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
           HTCC2506]
 gi|114537756|gb|EAU40880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fulvimarina pelagi
           HTCC2506]
          Length = 635

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/551 (60%), Positives = 403/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF KR+ESEYD FG GHSSTSISAGLGMAV RDL G KNNVV+VIGDGA
Sbjct: 90  MRTVRQEGGLSGFAKRTESEYDPFGAGHSSTSISAGLGMAVARDLAGAKNNVVSVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S  L+RL S +  
Sbjct: 150 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSHYLARLVSGKTY 200

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR  A+  T+++     E A K +EY RG  +G   TLFEELG YYIGP+DGH++D L
Sbjct: 201 RTLRNRARDFTQRLPDFFREGARKTEEYTRGFFTGG--TLFEELGFYYIGPIDGHDLDAL 258

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L+ V++ +T GP+L+HVVT+KG+GY  AE +ADKYHGV+KFD  TG Q KS     S
Sbjct: 259 VPVLKNVRDAET-GPILVHVVTKKGKGYEPAESSADKYHGVSKFDVITGAQSKSKGNAPS 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA +LI EA  D  +VA++AAM  GTGL+ F   +PTR FDVGIAEQHAVTF AGL
Sbjct: 318 YTNVFASSLIEEARHDDKIVAVNAAMPAGTGLDKFGEAYPTRTFDVGIAEQHAVTFCAGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAG VGADG TH GSFD  ++
Sbjct: 378 ATEGYKPFAAIYSTFLQRAYDQVVHDVAIQHLPVRFAIDRAGFVGADGATHAGSFDTAYL 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA SDEAEL HMV TAAA D+ P  FRYPRGNG GV++P   +G  LE+GKG
Sbjct: 438 CPLPGFVVMASSDEAELRHMVRTAAAYDEGPISFRYPRGNGTGVDMP--ERGEVLEIGKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VA+L +GT +   LAA+  L+  GL  TVADARF KPLD  L+  LA++HEV
Sbjct: 496 RLIKEGSKVAILAFGTRLTDSLAAAEELDGYGLSTTVADARFAKPLDTDLVERLARNHEV 555

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS GGF + V+Q LA  GLLD  +K RP+V+PD ++DHG PA   A+AGL  + 
Sbjct: 556 LITVEEGSSGGFAAQVLQHLASVGLLDMGLKIRPIVMPDAFVDHGVPAKMNAEAGLDKAG 615

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 616 IVSTVFRALGR 626


>gi|312114711|ref|YP_004012307.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219840|gb|ADP71208.1| deoxyxylulose-5-phosphate synthase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 643

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/554 (59%), Positives = 403/554 (72%), Gaps = 15/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK--NNVVAVIGD 58
           + T+RQ  GLSGFTKRSESEYD FG GHSSTSISAGLGMAV  DLKG     NV+AVIGD
Sbjct: 94  IRTLRQPGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVASDLKGEDGGRNVIAVIGD 153

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           G+M+AG AYEAMNNAG +D+ +I+ILNDN  +S+         PPVGALS+ L+R+ S+ 
Sbjct: 154 GSMSAGMAYEAMNNAGAMDARLIIILNDN-DMSIA--------PPVGALSNYLARMHSSE 204

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
              ++R++AK + +++       AA+ +E+ R + +G   +LFEELG+YY+GP+DGH++D
Sbjct: 205 TFLKVRDIAKNMAQRLPKIWERRAARAEEFTRHLFTGG--SLFEELGIYYVGPIDGHDLD 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+ +L  V+++   GPVLIH VT+KG+GY  AEKA DKYHGV KF+  TG Q K  A  
Sbjct: 263 ILLPVLRNVRDSAHKGPVLIHCVTQKGKGYEPAEKAPDKYHGVTKFNVITGAQDKVKASA 322

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  FA++L+ EA  D  +VAI AAM GGTGL+LF   FP R FDVGIAEQHAVTFAA
Sbjct: 323 PSYTKVFAQSLLDEARKDDTIVAISAAMPGGTGLDLFESEFPERTFDVGIAEQHAVTFAA 382

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EG+KPFCAIYS+F+QR YDQ++HDV +Q LPVRFA+DRAGLVGADG TH G+FD+ 
Sbjct: 383 GMATEGMKPFCAIYSTFLQRGYDQLIHDVSVQHLPVRFALDRAGLVGADGATHAGTFDLA 442

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+ CLP+ VVMAPSDEAEL HMV T+ AI+DRPS  RYPRG G GVE+P     +PL  G
Sbjct: 443 FLCCLPDFVVMAPSDEAELKHMVTTSVAINDRPSAIRYPRGEGYGVEMPAQGSVLPL--G 500

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++ EG  VA+L  GT +   L A+  L + GL  TVADARF KPLD  LIR LA+ H
Sbjct: 501 KGRVVREGSTVAILSLGTRLHESLKAADKLAAMGLSTTVADARFAKPLDLDLIRQLARHH 560

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EVL+TVEEGS GGFGS V++FLA+DGLLD  +K RPL LPD YIDHG P      AGL  
Sbjct: 561 EVLVTVEEGSCGGFGSQVLEFLARDGLLDHGLKVRPLTLPDTYIDHGKPEAMYEAAGLNA 620

Query: 539 SHIAATVFNILGQT 552
           S I   V   LG +
Sbjct: 621 SGIVGAVVAALGTS 634


>gi|381165922|ref|ZP_09875141.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Phaeospirillum molischianum DSM 120]
 gi|380684906|emb|CCG39953.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein
           [Phaeospirillum molischianum DSM 120]
          Length = 641

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/553 (60%), Positives = 413/553 (74%), Gaps = 12/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   GLSGFT+R+ESEYD FG GHSSTSISA LGMAVGRDL+G + N++AVIGDGA
Sbjct: 98  MLGLRHGGGLSGFTRRAESEYDPFGAGHSSTSISAALGMAVGRDLQGTQKNIIAVIGDGA 157

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AGQAYEAMNNAG   S ++V+LNDN  +S+          PVGA+S+ LSRL S+   
Sbjct: 158 MSAGQAYEAMNNAGAQGSRLVVVLNDN-DMSIAH--------PVGAMSAYLSRLMSSPKY 208

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R +AK + + +  P+   A + +EYARGM++G G TLFEELG +YIGPVDGHN + L
Sbjct: 209 HSIRHLAKDLVQLLPPPLERAAKRAEEYARGMVTGGG-TLFEELGFFYIGPVDGHNFEHL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++ +  PVL+HVVT+KG+GY  AE AADKYHGV +FD  TG+  K  A   S
Sbjct: 268 LPVLKNVRDSDSNTPVLLHVVTKKGKGYAPAEAAADKYHGVGRFDVVTGQFEKPVANAPS 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+AEAE D  VVAI AAM GGTGL+ F  RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 328 YTSVFAKALLAEAEADDRVVAITAAMPGGTGLDRFSSRFPGRCFDVGIAEQHAVTFAAGL 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYS+F+QRAYDQ+ HDV LQKLPVRFA+DRAGLVGADG TH G++D+  +
Sbjct: 388 ACEGLKPFCAIYSTFLQRAYDQLQHDVVLQKLPVRFAIDRAGLVGADGATHAGAYDLALL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C P++V+M PSDEAEL H VATAA+IDDRPS FRYPRG G+G+ELP  ++G  L +GKG
Sbjct: 448 GCQPDIVIMCPSDEAELMHAVATAASIDDRPSAFRYPRGEGMGIELP--DRGSVLPIGKG 505

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG RVA+L  GT +   L A+  L + GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 506 RILREGNRVAILTLGTRLVEVLKAADELTALGLSPTVADARFMKPLDEDLVLRLAREHEV 565

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV+Q LA  G LD  +K RP++LPD +I+H +  +Q  + GL  S 
Sbjct: 566 LITIEEGSIGGFGSHVLQLLASQGALDRGLKIRPMILPDIFIEHDTQWEQYEKVGLNASG 625

Query: 541 IAATVFNILGQTR 553
           I  T  + LG  +
Sbjct: 626 IVKTALSALGDPK 638


>gi|296533687|ref|ZP_06896241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
           49957]
 gi|296265986|gb|EFH12057.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseomonas cervicalis ATCC
           49957]
          Length = 650

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/557 (57%), Positives = 407/557 (73%), Gaps = 19/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-------KNNVV 53
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV RDLK           NV+
Sbjct: 96  IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVARDLKRAMPGEPRDDRNVI 155

Query: 54  AVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSR 113
           AVIGDGAM+AG AYEAMNNAG + S +IV+LNDN  +S+         PPVGA+S+ LSR
Sbjct: 156 AVIGDGAMSAGMAYEAMNNAGAMRSRLIVVLNDN-DMSI--------APPVGAMSAYLSR 206

Query: 114 LQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVD 173
           L S+RP   LRE+   + ++   P+   A + DEYARG+++G   TLFEELG YY+GP+D
Sbjct: 207 LISSRPFLSLREMMAKLARRFPAPLERAARRADEYARGLLTGG--TLFEELGFYYVGPID 264

Query: 174 GHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK 233
           GH++D L+ +L  +++ +   PVL+HVVT+KG+GY  AE +ADKYH VAKF+  TG Q K
Sbjct: 265 GHSLDHLLPVLRNLRDAEDGAPVLLHVVTQKGKGYAPAEASADKYHAVAKFNVVTGTQAK 324

Query: 234 SSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHA 293
           +     +YT  F++ALIAEAE D  +VA+ AAM  GTGL+ F +RFP R +DVGIAEQHA
Sbjct: 325 APPGPPTYTKVFSQALIAEAEADPRIVAVTAAMPSGTGLDAFQKRFPKRTYDVGIAEQHA 384

Query: 294 VTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG 353
           VTFAAGLA EG+KPF AIYS+F+QRAYDQV+HDV LQ LPVRFA+DRAGLVGADG TH G
Sbjct: 385 VTFAAGLATEGIKPFVAIYSTFLQRAYDQVMHDVALQNLPVRFALDRAGLVGADGATHAG 444

Query: 354 SFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI 413
           ++D+ ++ CLP MV+MAPSDE EL HMVAT+AA D+ P  FR+PRG G G++  P  +G 
Sbjct: 445 AYDIAYLGCLPQMVLMAPSDEVELAHMVATSAAYDEGPIAFRFPRGEGFGLQPVPA-RGE 503

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
            +E+G+GR+L EG +VALL YG  +Q CL A+  L + GL  TVADARF KPLD AL+  
Sbjct: 504 VMEIGRGRVLREGTKVALLSYGARLQECLKAAEELAARGLSCTVADARFAKPLDTALVER 563

Query: 474 LAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           LA+ HEV++T+EEGS+GGFG+ V+  LA  G  D  +++RP+ LPDRYIDH  P  Q A+
Sbjct: 564 LAREHEVMVTIEEGSVGGFGALVMHHLALRGAFDHGLRFRPMALPDRYIDHDKPERQYAE 623

Query: 534 AGLTPSHIAATVFNILG 550
           AGL  + I ATV   LG
Sbjct: 624 AGLDAAAIVATVGAALG 640


>gi|414171842|ref|ZP_11426753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
 gi|410893517|gb|EKS41307.1| 1-deoxy-D-xylulose-5-phosphate synthase [Afipia broomeae ATCC
           49717]
          Length = 643

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/554 (59%), Positives = 403/554 (72%), Gaps = 17/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R  +GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV RDL G KNNV+AVIGDG+
Sbjct: 94  IRTLRMGNGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVARDLTGGKNNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG + S +IVILNDN  +S+         PPVGA+S+ L+RL S +  
Sbjct: 154 MSAGMAYEAMNNAGAMHSRLIVILNDN-DMSIA--------PPVGAMSAYLARLLSGKTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE  K +  ++     + A + +EYARGM++G   TLFEELG +Y+GP+DGHN+D L
Sbjct: 205 ASAREALKNLAHKLPKFFEDRALRAEEYARGMVTGG--TLFEELGFFYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++  T GP+L+HVVT+KG+GY  AE + DKYH VAKFD ATG Q K+ +   S
Sbjct: 263 LPVLTNVRDAPT-GPILVHVVTQKGKGYAPAEASDDKYHAVAKFDVATGAQAKAKSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F ++L+ EA  D  +VAI AAM GGTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFGQSLVKEARKDDKIVAITAAMPGGTGVDIFGKAFPDRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVG DGPTH GSFD  ++
Sbjct: 382 ATEGFKPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGQDGPTHAGSFDNVYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP  V+MA +DEA+L HMVAT  AIDD PS  RYPRG G GVE+P    G+PL +GKG
Sbjct: 442 GCLPGFVIMAAADEADLVHMVATQVAIDDAPSALRYPRGEGRGVEMP--EFGVPLPIGKG 499

Query: 421 RILIEG---ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           RI+ E     +VALL +G  +  CL A+  LE+ GL  TVADARF KPLD  +I  LA+ 
Sbjct: 500 RIMREASGKSKVALLSFGARLGECLKAADELETLGLSATVADARFMKPLDLDMILKLARE 559

Query: 478 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           HEVLIT+EEGSIGGFG+HV+Q LA  G LD  ++ R LVLPD +IDH SPA    QAGL 
Sbjct: 560 HEVLITIEEGSIGGFGTHVLQALADHGALDRGLRVRTLVLPDIFIDHDSPAKMYEQAGLD 619

Query: 538 PSHIAATVFNILGQ 551
              I A VF  LG+
Sbjct: 620 AKGIVAKVFEALGR 633


>gi|430002425|emb|CCF18206.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein [Rhizobium
           sp.]
          Length = 639

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/551 (58%), Positives = 405/551 (73%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFT+R+ES+YD FG  HSSTSISAGLGMAV  DL G K +V+AVIGDGA
Sbjct: 94  IRTLRQENGLSGFTRRAESDYDPFGAAHSSTSISAGLGMAVAADLSGSKRHVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE+ K +T  +G        +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ + L
Sbjct: 205 MGVREIGKKLTAYLGKGFDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHV T+KG+GYP AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNGQ-GPVLIHVCTQKGKGYPPAEAAADKYHGVNKFDVITGTQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F E+L+ EA  D+ +V I AAM  GTG++     FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFGESLVQEARFDEKIVGITAAMPNGTGIDKLAEVFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QR YDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AAEGFKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVELP   +G  LE+GKG
Sbjct: 442 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVELP--ERGQILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT ++ CL A+  L++ GL  TVADARF KPLDH LIR LA+ H+V
Sbjct: 500 RIVKEGSKVALLSFGTRLKDCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHDV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGFG+HV+ FLA +GLLD  +K RP+VLPD +++  SP    A+AGL  + 
Sbjct: 560 LITIEEGALGGFGAHVLHFLATEGLLDQGLKVRPMVLPDVWMEQASPDAMYAKAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I  TVFN LGQ
Sbjct: 620 IVTTVFNALGQ 630


>gi|163761048|ref|ZP_02168126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
           DFL-43]
 gi|162281829|gb|EDQ32122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hoeflea phototrophica
           DFL-43]
          Length = 643

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/555 (58%), Positives = 403/555 (72%), Gaps = 14/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFTKRSESEYD FG GHSSTSISAGLGMAV   L+ +  +VV+VIGDGA
Sbjct: 94  IRTLRQENGLSGFTKRSESEYDDFGAGHSSTSISAGLGMAVASQLQNKPRHVVSVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+R+ S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARMASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEELG Y+IGP+DGHN+D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEELGFYHIGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV+KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNGD-GPVLIHVVTQKGKGYGPAEAAADKYHGVSKFDVITGTQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F E L+ E   D  +VAI AAM  GTG++ F + FP R FDVGIAEQHAVTFAAG+
Sbjct: 322 YTAVFGETLVQEGGYDDKIVAISAAMPSGTGVDKFAKVFPERTFDVGIAEQHAVTFAAGM 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QR YDQVVHDV +QKLPVRF +DRAG VGADG TH GSFD T++
Sbjct: 382 ATEGLKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHAGSFDTTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLP  VVMA +DEAEL HMV TA A D+ P  FRYPRG G+GV++P   +G  LE+GKG
Sbjct: 442 ACLPGFVVMAAADEAELKHMVRTAVAYDEGPLSFRYPRGEGVGVDMP--ERGQILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VAL+ +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HEV
Sbjct: 500 RVMREGSKVALISFGTRLAECLVAAEDLDAAGLSTTVADARFAKPLDHELIRQLARHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGSHV+QFLA +GLLDG +K R +VLPD ++DH SP    A+AGL    
Sbjct: 560 LITIEEGSVGGFGSHVLQFLATEGLLDGGLKVRSMVLPDIFMDHASPDVMYARAGLDRKG 619

Query: 541 IAATVFNILGQTREA 555
           I  TVF  LG    A
Sbjct: 620 IVDTVFRALGTENPA 634


>gi|338740575|ref|YP_004677537.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hyphomicrobium sp. MC1]
 gi|337761138|emb|CCB66971.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Hyphomicrobium sp. MC1]
          Length = 648

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/553 (60%), Positives = 402/553 (72%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV R++ G  NNVV VIGDGA
Sbjct: 98  IRTLRQPGGLSGFTKRTESEYDPFGAAHSSTSISAGLGMAVAREMSGGTNNVVCVIGDGA 157

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG     +IVILNDN ++S+         PP GALSS L+R  S+   
Sbjct: 158 MSAGMAYEAMNNAGARSERLIVILNDN-EMSIA--------PPTGALSSYLARTTSSDSY 208

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R++AK + K++     E AA+V+EY R +  G     FEELG YYIGP+DGH++  L
Sbjct: 209 LYVRDLAKQLAKRLPKSWGERAARVEEYTRSLWHGGA--WFEELGFYYIGPIDGHDLSQL 266

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL  V++ +  GP+L+HVVT+KG+GY  AE +ADKYHGV KF+  TG Q K+ A   S
Sbjct: 267 VPILRNVRDAEQ-GPILVHVVTKKGKGYAPAEASADKYHGVTKFNVVTGVQTKAPASAPS 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EA+ D  +VAI AAM  GTGL++F R FP R FDVGIAEQHAVTFAAGL
Sbjct: 326 YTRVFADSLIDEAKKDDKIVAITAAMPDGTGLDVFGRAFPDRTFDVGIAEQHAVTFAAGL 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCA+YS+F+QR YDQVVHDV LQ LPVRFA+DRAG VGADG TH GSFD+ ++
Sbjct: 386 ATEGMKPFCALYSTFLQRGYDQVVHDVALQSLPVRFAIDRAGFVGADGATHAGSFDLAYL 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MAP+DE EL HMVATAAAIDDRPS FRYPRG G GV LP    GIPLE+GKG
Sbjct: 446 GCLPNMVIMAPADECELKHMVATAAAIDDRPSAFRYPRGEGTGVALP--ETGIPLEIGKG 503

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG  +ALL  GT +Q  L A+  L + GL  TVADARF KPLD  LIR LA++H+V
Sbjct: 504 RILREGSTIALLSLGTRLQETLKAADQLAALGLSATVADARFMKPLDTDLIRRLAENHDV 563

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGSIGGFGSHV+ +LA++GLLD  +K R  V+PD ++D   P     +AGL    
Sbjct: 564 LITVEEGSIGGFGSHVLHYLAENGLLDRGLKVRSKVMPDEFVDQDKPEVMNQRAGLCAQG 623

Query: 541 IAATVFNILGQTR 553
           I  TV + +   R
Sbjct: 624 IVETVCDAIQLER 636


>gi|418055612|ref|ZP_12693666.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
 gi|353209890|gb|EHB75292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
          Length = 635

 Score =  639 bits (1647), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 328/551 (59%), Positives = 398/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR ES YD FG  HSSTSISA LGMAV RDL G KN+V+AVIGDGA
Sbjct: 91  IRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSISAALGMAVARDLNGGKNSVIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG  D  +IVILNDN  +S+         PP GALS+ L+R+ S+   
Sbjct: 151 MSAGMAYEALNNAGARDERLIVILNDN-DMSIA--------PPTGALSAYLARVTSSGTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ AK + K +       AA+V+EY R +  G   T FEELG YY+GP+DGH+ + L
Sbjct: 202 LHLRDYAKQLAKMLPKQWERRAARVEEYTRHIWQGG--TWFEELGFYYVGPIDGHDFNQL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +   P+L+HVVT+KG+GY  AE A DKYHGV KF+  TG Q K      S
Sbjct: 260 LPVLKNVRDAEQA-PILVHVVTKKGKGYAPAEAADDKYHGVNKFNVITGAQVKPKPNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EA  DK +VAI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTKVFADSLIDEARKDKRIVAITAAMPSGTGLDHFGKEFPDRTFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRFA+DRAGLVGADG TH GSFD+ ++
Sbjct: 379 AAEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFALDRAGLVGADGATHAGSFDIAYL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP+ V+MA SDEAEL HMVAT   IDDRPS  RYPRG GIGV++P    G+PLE+GKG
Sbjct: 439 GCLPDFVIMAASDEAELVHMVATQVQIDDRPSALRYPRGEGIGVDMP--EFGVPLEIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG ++ALL  GT +  CL A+  L++ GL  TVADARF KPLD  LIR LA +HEV
Sbjct: 497 RIVREGSKIALLSLGTRLAECLKAADQLQTFGLSTTVADARFAKPLDGRLIRDLALNHEV 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGS+GGFGSHV+QFL+ +GLLD  ++ R  VLPD +ID G P     +AGL  S 
Sbjct: 557 LVTVEEGSVGGFGSHVLQFLSNEGLLDRGLRVRAKVLPDVFIDQGKPEAMYEEAGLNASG 616

Query: 541 IAATVFNILGQ 551
           I  TVF  LG+
Sbjct: 617 IVQTVFAALGR 627


>gi|427429236|ref|ZP_18919272.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
           AK4]
 gi|425880916|gb|EKV29610.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caenispirillum salinarum
           AK4]
          Length = 639

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 322/554 (58%), Positives = 397/554 (71%), Gaps = 13/554 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  G+SGFT RSESEYD FG GHSSTSISAGLGM V  DL G   +V+ VIGDGA
Sbjct: 94  LRTVRQPGGISGFTLRSESEYDPFGAGHSSTSISAGLGMKVACDLAGDDRHVICVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +D+ +IVILNDN     P          VGA+S+ LS++ S++P 
Sbjct: 154 MSAGMAYEAMNNAGAMDAKLIVILNDNDMSIAPA---------VGAMSAYLSKVLSSKPW 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R++AK +  +  GP++  A + +EYARGM++G   TLFEE+G YY+GP+DGH +D L
Sbjct: 205 LSARQLAKEMAARFPGPINRAAKRAEEYARGMVTGG--TLFEEMGFYYVGPIDGHKMDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L+ V+++   GPVLIH +T+KGRGY  AE AADKYHGV+KFD  TG Q K+     S
Sbjct: 263 VPVLKNVRDSDPQGPVLIHCITQKGRGYAPAEAAADKYHGVSKFDVVTGTQAKAKPNAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+ EA  D  VVA+ AAM GGTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 323 YTSVFAKALVEEAREDDKVVAVTAAMPGGTGLDKFGKEFPERTFDVGIAEQHAVTFAAGL 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QR YDQVVHDV +Q LPVRFA+DRAG VGADG TH GSFD+ ++
Sbjct: 383 ASEGYKPFAAIYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGFVGADGATHQGSFDLCYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNM  + P+DEAEL H VATA A D  P  FRYPRG G+G +LP   KG  LE+GKG
Sbjct: 443 CCLPNMTFLCPADEAELVHAVATAVAHDSGPFAFRYPRGEGVGTQLP--EKGEVLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG  VA+L  GT + +   A+  L + GL  TVADARF KP+D  L+R LA  HEV
Sbjct: 501 RVLREGSTVAILSLGTRLTAAQKAAEDLAAKGLSCTVADARFAKPIDTDLVRRLAADHEV 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+ GGFG+HV+ FLA++GLLD  +K R +  PDR+I+H  P  Q+A AGL P  
Sbjct: 561 LITVEEGARGGFGAHVLHFLAEEGLLDAGLKVRTMCFPDRFIEHEKPDTQIAMAGLRPED 620

Query: 541 IAATVFNILGQTRE 554
           IAAT    LG+  E
Sbjct: 621 IAATALKALGRGEE 634


>gi|365855944|ref|ZP_09395974.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
           bacterium AT-5844]
 gi|363718654|gb|EHM01988.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Acetobacteraceae
           bacterium AT-5844]
          Length = 642

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 323/547 (59%), Positives = 402/547 (73%), Gaps = 22/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL--------KGRKN-- 50
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV RDL         G++N  
Sbjct: 106 IRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVARDLLRGTPYSQGGKRNDQ 165

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           NV+AVIGDGAM+AG AYEAMNNAG + S +IV+LNDN  +S+         PPVGA+S+ 
Sbjct: 166 NVIAVIGDGAMSAGMAYEAMNNAGAMRSRLIVVLNDN-DMSI--------APPVGAMSAY 216

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           LSRL S+RP   LREV   V ++   P+   A + DE+ARGM++G   TLFEELG YY+G
Sbjct: 217 LSRLISSRPFLSLREVMAKVARRFPAPLERAARRADEFARGMLTGG--TLFEELGFYYVG 274

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           P+DGHN+D L+ +L  +++ +T  PVL+HVVT+KG+GY  AE A DKYH VAKF+  TG 
Sbjct: 275 PIDGHNMDHLLPLLRNLRDAETGPPVLLHVVTQKGKGYAPAEAAPDKYHAVAKFNVVTGT 334

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     +YT  FA ALIAEAE D+ +VA+ AAM  GTGL+LF +RFP R FDVGIAE
Sbjct: 335 QTKAPPGPPTYTKVFANALIAEAERDERIVAVTAAMPSGTGLDLFQKRFPRRTFDVGIAE 394

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFAAG+A EG+KPF AIYS+F+QRAYDQVVHDV LQKLPVRFA+DRAGLVGADG T
Sbjct: 395 QHAVTFAAGMATEGIKPFVAIYSTFLQRAYDQVVHDVALQKLPVRFALDRAGLVGADGAT 454

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G++D+ ++ C+P MV+MAP+DEAEL HMVATAAA DD P   R+PRG G G+   P  
Sbjct: 455 HAGAYDIAYLGCIPQMVLMAPADEAELAHMVATAAAFDDGPIALRFPRGEGFGLAEVPA- 513

Query: 411 KGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
           +G P+E+G+GR+L EG  VALL YGT +Q CL A+  L ++GL  TVADARF KPLD  L
Sbjct: 514 RGTPVEIGRGRVLREGTSVALLSYGTRLQECLQAAEELAAHGLSCTVADARFAKPLDTTL 573

Query: 471 IRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQ 530
           +  LA+ HEVL+T+EEGS  GFG+ V+Q LA  G LD  +K RP+ LPD +IDH +P  Q
Sbjct: 574 VERLAREHEVLVTIEEGSACGFGALVMQHLAWAGALDHGLKLRPICLPDTFIDHDTPKAQ 633

Query: 531 LAQAGLT 537
               G++
Sbjct: 634 YDNNGMS 640


>gi|449016065|dbj|BAM79467.1| 1-deoxyxylulose-5-phosphate synthase [Cyanidioschyzon merolae
           strain 10D]
          Length = 772

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 322/579 (55%), Positives = 414/579 (71%), Gaps = 28/579 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R++ G+SGFT+R ESEYD FG GHSSTSISA LG+A+GRDL G+K +V+AVIGDGA
Sbjct: 168 MHTLRKSGGISGFTRRVESEYDVFGAGHSSTSISAALGLAIGRDLAGKKQHVIAVIGDGA 227

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP-IPPVGALSSALSRLQSNRP 119
           +T G AYEAMNNAGYL+S +IVILNDN QVSLPT T       P GALS  +SRL +++ 
Sbjct: 228 LTGGMAYEAMNNAGYLNSRIIVILNDNGQVSLPTGTKSAAGTGPAGALSGYMSRLLTSKE 287

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMIS----GSGSTLFEELGLYYIGPVDGH 175
            +++R +AK  ++    P+   AA++DEYAR  ++    G+ +TLFEELG YY+GPVDGH
Sbjct: 288 FQDVRAIAKEFSRLFPDPLQRTAAQLDEYARAWVAQGAGGNRATLFEELGFYYVGPVDGH 347

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           +V+ LV +L+ +++     P+ +HV TEKGRGYP AE A DKYHGV+KFD ATGKQ    
Sbjct: 348 DVEVLVNVLKNIRDAPGNKPIFLHVKTEKGRGYPPAESALDKYHGVSKFDLATGKQMVPM 407

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT+ FA+ALIAEA+ D+ +V I AAM GGTG+  F    PTRCFDVGIAEQHAVT
Sbjct: 408 HSPPSYTSVFAKALIAEADEDRRIVGITAAMPGGTGMGAFGEAHPTRCFDVGIAEQHAVT 467

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FAAGL+ +G KPFC IYS+F+QR YDQV+HDV LQKLPVRF +DRAGLVG DGPTH G+F
Sbjct: 468 FAAGLSIQGFKPFCCIYSTFLQRGYDQVIHDVALQKLPVRFILDRAGLVGNDGPTHHGTF 527

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM++MAPSDE EL HMVATA A D+ P   RYPRG  +G+++   + G  L
Sbjct: 528 DLAYLGCIPNMMIMAPSDEIELVHMVATARAYDEGPCALRYPRGTAVGLDVLREHFGYDL 587

Query: 416 E----------VGKGRILIEGER------------VALLGYGTAVQSCLAASALLESNGL 453
           E          +GKGRI+ E +             VA+L  GT +   + A+  LE+  +
Sbjct: 588 EAIPVRGKVLPIGKGRIIREKKSASTADGAEIPRGVAILSLGTRLLEAVHAAGQLEALDV 647

Query: 454 RLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKW 512
             TVADARF KPLD  LIR L ++HEVLIT+EEGSIGGFG HV+ + A +GLLD G  K 
Sbjct: 648 ACTVADARFMKPLDTDLIRRLIRNHEVLITIEEGSIGGFGDHVLHYAALNGLLDEGKCKV 707

Query: 513 RPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 551
           RP+V+PD +I+ G+ A+Q  +AGLT +HI  T   ++G+
Sbjct: 708 RPMVIPDVFIETGTQAEQYEEAGLTAAHIVRTALQLVGK 746


>gi|402772875|ref|YP_006592412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
 gi|401774895|emb|CCJ07761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocystis sp. SC2]
          Length = 642

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 327/562 (58%), Positives = 406/562 (72%), Gaps = 17/562 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ESEYD FG GHSSTSISAGLGMAV RDL    N+VVAVIGD +
Sbjct: 93  IRTLRMGGGLSGFTKRAESEYDAFGAGHSSTSISAGLGMAVARDLADGDNHVVAVIGDSS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG L S +IVILNDN  +S+         PP GA+S+ L+RL S    
Sbjct: 153 MSAGMAYEALNNAGALHSRLIVILNDN-DMSIA--------PPTGAMSAYLARLVSGGAY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +RE A+ +   +   +++ A K +E++R  I+G   T+FEELG YY+GP+DGHN+D L
Sbjct: 204 RSIREAARQLASHLPRFIYDKARKAEEFSRSFITGG--TMFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ K  GPVL+HVVT+KG+G+  AE++ADK H V KFD ATG Q K  A   +
Sbjct: 262 LPVLKNVRD-KDDGPVLVHVVTQKGKGFGPAEESADKCHAVNKFDVATGVQIKPKANAPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+AEAE D  +VAI AAM  GTGL++F + FP R FDV IAEQHAVTFAAGL
Sbjct: 321 YTNIFAKALVAEAEHDDKIVAITAAMPSGTGLDIFGKAFPHRTFDVAIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KPFCA+YS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADGPTH G+FD+ ++
Sbjct: 381 ACEGYKPFCALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGPTHAGAFDLAYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP  V+MAPSDEAEL HMVATAAA DD PS FRYPRG G+GV++P   +G  LE+GKG
Sbjct: 441 GCLPGFVIMAPSDEAELMHMVATAAAYDDGPSAFRYPRGEGLGVDVP--ERGDILEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VA+L  GT +   L A+A LES G+  TVADARF KP+D  L+R LA +HE 
Sbjct: 499 RILREGSKVAILSLGTRLADSLKAAAELESYGVSTTVADARFAKPIDRDLLRRLAANHEA 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGT---VKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           LI VEEGSIGGFG+ V Q L++DGLLDG     K+R + LPD YIDH      +A+A L 
Sbjct: 559 LIVVEEGSIGGFGAQVFQALSEDGLLDGVRGAFKFRSMTLPDAYIDHDKHELMIAKAMLD 618

Query: 538 PSHIAATVFNILGQTREALEIM 559
              I      +LG  + A  +M
Sbjct: 619 SKAIIGKALELLGDEKAAARVM 640


>gi|395765602|ref|ZP_10446196.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
 gi|395411156|gb|EJF77690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. DB5-6]
          Length = 640

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 323/552 (58%), Positives = 404/552 (73%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMA+   LK   K N+++VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAMASALKAETKRNIISVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K ++K++     E A + +E+ARG + G   TLF+ELG YY+GP+DGHN++ 
Sbjct: 204 YRSLRERVKVLSKKLPKFFGEKARRSEEFARGFLVGG--TLFDELGFYYVGPIDGHNLEH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV  FD  TGKQ K  +++ 
Sbjct: 262 LLPVLKNVREYPY-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDIVTGKQVKIQSKSL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  VV I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEASYDDKVVGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D+ P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LTTLPEFVVMAPSDEVELMHMVRTAAAYDEGPLSFRYPRGEGVGMDLP--ERGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG R+AL+ +GT +   L A+++LE+ GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRILREGNRIALVCFGTRMSEVLMAASMLEAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+H++QF AQ+GLL+  +K R L LPD Y+ HGSP   L++ GL   
Sbjct: 559 VLVTIEEGAMGGFGAHLLQFFAQEGLLEHGLKVRTLKLPDEYLSHGSPEKVLSRIGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIINTVFTALGR 630


>gi|402820429|ref|ZP_10869996.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
           IMCC14465]
 gi|402511172|gb|EJW21434.1| hypothetical protein IMCC14465_12300 [alpha proteobacterium
           IMCC14465]
          Length = 643

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 321/556 (57%), Positives = 407/556 (73%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ES YD FG  HSSTSISAGLGMAV RDLK   NNVVAVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAVARDLKETDNNVVAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +D  +IVILNDN  +S+         PPVGA+S+ L+RL S    
Sbjct: 154 MSAGMAYEAMNNAGAMDGRLIVILNDN-DMSIA--------PPVGAMSAYLARLLSGSGY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LR+  KG+  ++   + E + K++EY RG  +G   TLFEE+G YY+GP+DGHN+D L
Sbjct: 205 RKLRKSLKGIASKMPRSIKEASRKMEEYTRGFWTGG--TLFEEIGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V+++   GP+L+HVVT+KG GY  AE AADKYHGV+KFD  TG Q K S    S
Sbjct: 263 LPVLQNVRDS-VEGPILVHVVTQKGHGYAPAEAAADKYHGVSKFDIVTGLQSKPSTNIPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA++LI EAE DK++VA+ AAM  GTGL+ F   +P RCFDVGIAEQHAVTFAAG+
Sbjct: 322 YTSVFADSLIKEAETDKNIVAVTAAMPDGTGLDKFAHIYPDRCFDVGIAEQHAVTFAAGM 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPF AIYS+F+QR YDQ+VHDV +QKLPVRFA+DRAGLVGADGPTH GSFD+ ++
Sbjct: 382 ATEGLKPFVAIYSTFLQRGYDQIVHDVAIQKLPVRFAIDRAGLVGADGPTHAGSFDMAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP+ V+MA +DEAEL +MV TAA I+DRPS FRYPRG+  G+ +P   K   LE+GKG
Sbjct: 442 GALPDFVLMAAADEAELVNMVHTAAQINDRPSAFRYPRGSATGIAMP--EKPQLLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG+++A+L YGT +     A+  L+  G   TVADARF KPLD  LI  LA+ HE+
Sbjct: 500 RIIREGQQIAILSYGTRLGEASLAADRLDKEGHSTTVADARFMKPLDKELILQLAREHEI 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG +GGFG+HV+ FLA++G+LD  +K R L LPD +ID  SP      AGL   +
Sbjct: 560 LITVEEGGLGGFGAHVLHFLAEEGVLDAGLKVRTLTLPDIFIDQDSPERMYDAAGLNSDN 619

Query: 541 IAATVFNILGQTREAL 556
           I   V +++G+  + +
Sbjct: 620 IYDAVKDVIGRGEKTI 635


>gi|182678782|ref|YP_001832928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|229813261|sp|B2IDK3.1|DXS_BEII9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|182634665|gb|ACB95439.1| deoxyxylulose-5-phosphate synthase [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 642

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 326/548 (59%), Positives = 403/548 (73%), Gaps = 14/548 (2%)

Query: 9   GLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYE 68
           GLSGFTKRSES YD FGT HSSTSISAGLGMA    L G  NNV+AVIGDG+M+AG AYE
Sbjct: 102 GLSGFTKRSESVYDPFGTAHSSTSISAGLGMAAATTLSGGNNNVIAVIGDGSMSAGMAYE 161

Query: 69  AMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAK 128
           AMNNAG + S +I+ILNDN ++S+         PP GALS+ L+RL S    R +RE AK
Sbjct: 162 AMNNAGAMHSRLIIILNDN-EMSIA--------PPAGALSAYLARLVSGGTYRTVREAAK 212

Query: 129 GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVK 188
            + + +   +++ A K +E+AR   +G   T+FEELG+YY+GP+DGHN+D L+ +L+ V+
Sbjct: 213 QLGRHLPHFIYDRARKTEEFARNFWAGG--TMFEELGIYYVGPIDGHNLDHLLPVLKNVR 270

Query: 189 NTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEA 248
           + K TGP+L+HVVT+KG+GY  A  A+DKYH V  FD  TG Q K  A   SYT  FA+A
Sbjct: 271 DFKETGPILVHVVTQKGKGYAPAAAASDKYHSVNTFDVVTGVQTKPKANAPSYTRVFADA 330

Query: 249 LIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPF 308
           L+ EAE D  +VAI AAM GGTGL++F + FP R FDVGIAEQHAVTFAAGLA EG +PF
Sbjct: 331 LVKEAERDDKIVAITAAMPGGTGLDVFGKAFPERTFDVGIAEQHAVTFAAGLATEGYRPF 390

Query: 309 CAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVV 368
           CA+YS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDV+++  LPNMV+
Sbjct: 391 CALYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVSYLGILPNMVI 450

Query: 369 MAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER 428
           MA +DEAEL HMVATAAA D+ P  FRYPRG G+G+ELP    G  L++G+GRI+ EG  
Sbjct: 451 MAAADEAELVHMVATAAAYDEGPIAFRYPRGEGVGIELP--QIGEILDIGRGRIVREGTT 508

Query: 429 VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS 488
           VALL  GT +     A+  L S G+ +TVADARF KPLD  L+R LAK+HEVLIT+EEGS
Sbjct: 509 VALLSLGTRLAEASKAAEQLASYGISVTVADARFAKPLDLDLVRRLAKNHEVLITIEEGS 568

Query: 489 IGGFGSHVVQFLAQDGLLDGT-VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 547
           +GGFGS V+Q LA++GLLDGT +K+R +VLPD ++DH  P    AQAGL    I A V  
Sbjct: 569 VGGFGSFVMQALAEEGLLDGTGLKFRSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLA 628

Query: 548 ILGQTREA 555
            LG+  EA
Sbjct: 629 TLGRENEA 636


>gi|407784767|ref|ZP_11131916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
           B30]
 gi|407204469|gb|EKE74450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Celeribacter baekdonensis
           B30]
          Length = 642

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/556 (58%), Positives = 395/556 (71%), Gaps = 18/556 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNN----VVAVI 56
           + T+R   GLSGFTKRSES YD FG  HSSTSISA LG AV RDL G   N     +AVI
Sbjct: 94  IRTLRTEGGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGAPENGIGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   +IVILNDN ++S+         PP GALSS L+RL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSI--------APPTGALSSYLTRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG    +  P  E A +  E  +GM  G   TLFEELG  Y+GP+DGH+
Sbjct: 205 GAPFQELKAAAKGAVSLLPHPFQEGAKRAKEMLKGMTVGG--TLFEELGFSYVGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+++L  VK  + TGP+LIH +T+KG+GY  AE   DK H   KFD  TG+Q K+ +
Sbjct: 263 LDQLLSVLRTVK-ARATGPILIHAITQKGKGYAPAEGRPDKGHATGKFDMVTGEQKKAKS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ FA+ALI EA  D  +VA+ AAM  GTGLNLF  RFPTRCFDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFAKALIQEAGFDDKIVAVTAAMPDGTGLNLFAERFPTRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
            AGLA  G+KPFC +YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 CAGLAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V F+A LP MVVMA +DEAEL HMVATAAA DD P  FRYPRG G+GV++P   +G+PLE
Sbjct: 442 VAFLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVGVQMP--ERGVPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR+++EG RVALL +GT ++S L A+  L + G+  TVADARF KPLDH LIR L  
Sbjct: 500 IGKGRVVVEGTRVALLSFGTRLESSLKAAENLAAKGISCTVADARFAKPLDHDLIRDLVA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LIT+EEG++GGFGSHV  FLA +GL D  +K+R + LPD +ID  SP    A AGL
Sbjct: 560 NHEALITIEEGAVGGFGSHVADFLANEGLFDRGLKFRSMTLPDTFIDQASPEAMYAMAGL 619

Query: 537 TPSHIAATVFNILGQT 552
               I A V + LG T
Sbjct: 620 NTPDIEAKVLSALGVT 635


>gi|158424735|ref|YP_001526027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azorhizobium caulinodans
           ORS 571]
 gi|172047993|sp|A8IBS1.1|DXS_AZOC5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|158331624|dbj|BAF89109.1| deoxyxylulose-5-phosphate synthase [Azorhizobium caulinodans ORS
           571]
          Length = 641

 Score =  635 bits (1638), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 322/536 (60%), Positives = 394/536 (73%), Gaps = 14/536 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV RDL G   NV+AVIGDGA
Sbjct: 93  IRTLRQGGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVARDLSGGDRNVIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 153 MSAGMAYEAMNNAGAMDSRLIVILNDN-DMSIA--------PPTGAMSAYLARLISGRTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE+ K +   +   + + AAK +E+ARG  +G   TLFEE+G YY+GP+DGHN++ L
Sbjct: 204 LSLREIGKQLAGHLPKFVKDGAAKAEEFARGFWTGG--TLFEEMGFYYVGPIDGHNLEHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ KT GP+L+HVVT+KG+GYP AE +ADKYHGV KFD  TG Q K+ +   S
Sbjct: 262 LPVLKNVRDAKT-GPILVHVVTQKGKGYPPAEASADKYHGVVKFDVVTGAQVKAKSNAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE LI EA  D  VVAI AAM  GTGL+LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTRVFAETLIDEARRDDKVVAITAAMPSGTGLDLFGQAFPQRTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG +PFCA+YS+F+QR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD+  +
Sbjct: 381 AAEGYRPFCALYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDLAML 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP   VMAP+DEAEL HM+ATA   D  P  FR+PRG G+GVE P   KG  L +GKG
Sbjct: 441 TCLPGFTVMAPADEAELTHMIATAVGHDAGPIAFRFPRGEGVGVERP--EKGERLPIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+ +A L  GT + +CL  +  L S G+  TVADARF KP+D  LI  LA++H  
Sbjct: 499 RVVREGQDIAFLSLGTRLAACLDVAERLSSLGISATVADARFAKPIDRELIAHLARTHAA 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           L+ VEEGS+GGFGS V+QFL+ +GL+DG +K R L LPD YIDH +PA QLA+AGL
Sbjct: 559 LVVVEEGSVGGFGSQVLQFLSDEGLMDGGLKVRALTLPDTYIDHDTPAAQLAEAGL 614


>gi|300023488|ref|YP_003756099.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525309|gb|ADJ23778.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 635

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 327/551 (59%), Positives = 394/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR ES YD FG  HSSTSISA LGMAV RDL G  NNV+AVIGDGA
Sbjct: 91  IRTLRQPGGLSGFTKRDESPYDPFGAAHSSTSISAALGMAVARDLSGGSNNVIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG  +  +IVILNDN  +S+         PP GALS+ L+R  S+   
Sbjct: 151 MSAGMAYEAMNNAGARNERLIVILNDN-DMSIA--------PPTGALSAYLARATSSGTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ AK + K +       AA+V+EY R +  G     FEELG YY+GP+DGH+   L
Sbjct: 202 LHLRDYAKQLAKMLPKQWERRAARVEEYTRHIWQGGA--WFEELGFYYVGPIDGHDFSQL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ +   P+L+HVVT+KG+GY  AE A DKYHGV KF+  TG Q K      S
Sbjct: 260 LPVLKNVRDAEQ-APILVHVVTKKGKGYAPAEAADDKYHGVNKFNVVTGAQVKPKPNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LIAEA  D  +VAI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTKVFADSLIAEARKDDRIVAITAAMPSGTGLDYFGKEFPERTFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF  IYS+F+QRAYDQVVHDV +QKLPVRFA+DRAGLVGADG TH GSFD++++
Sbjct: 379 ATEGYKPFATIYSTFLQRAYDQVVHDVAIQKLPVRFALDRAGLVGADGATHAGSFDISYL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP+ V+MA +DEAEL HMVAT  AIDDRPS  RYPRG G+GV+LP    G+ LE+GKG
Sbjct: 439 GCLPDFVIMAAADEAELVHMVATQVAIDDRPSALRYPRGEGVGVDLP--QTGVALEIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL  GT +  CL A+  L+S GL  TVADARF KPLD  LIR LA +HEV
Sbjct: 497 RIVREGSKVALLSLGTRLAECLKAADQLQSFGLSTTVADARFAKPLDTRLIRDLALNHEV 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEGS+GGFGS+V+QFL+ +GLLD  ++ R  VLPD +IDHG P      AGL  S 
Sbjct: 557 LVTVEEGSVGGFGSYVLQFLSDEGLLDRGLRVRTKVLPDVFIDHGKPEVMYEDAGLNASG 616

Query: 541 IAATVFNILGQ 551
           I  TVF  LG+
Sbjct: 617 IVKTVFAALGR 627


>gi|328544916|ref|YP_004305025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polymorphum gilvum
           SL003B-26A1]
 gi|326414658|gb|ADZ71721.1| 1-deoxy-D-xylulose 5-phosphate synthase [Polymorphum gilvum
           SL003B-26A1]
          Length = 639

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 334/550 (60%), Positives = 401/550 (72%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ES YD FG  HSSTSISAGLGMAVGRDL GR NNV+AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAVGRDLDGRANNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG + S +IV+LNDN  +S+         PPVGA+S+ L++L S    
Sbjct: 154 MSAGMAYEAMNNAGSMHSRLIVVLNDN-DMSI--------APPVGAMSAYLAKLVSGPTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + LR+ AK + + +  P+ E AAK +E+ARG  +G   TLFEELG YY+GPVDGHN++ L
Sbjct: 205 QSLRDAAKSIARALPRPLQEKAAKAEEFARGFWTGG--TLFEELGFYYVGPVDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++T + GPVLIHVVT+KG+GY  AE A DKYHGVA+FD  TGKQ K  A   S
Sbjct: 263 LPVLRNVRDTHS-GPVLIHVVTQKGKGYAPAEGAKDKYHGVARFDVITGKQAKPKANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA +L+ EAE D  +VAI AAM  GTGL+LF   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFARSLVQEAEQDDKIVAITAAMPEGTGLDLFQEAFPKRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADGPTH G+FD  F+
Sbjct: 382 ATEGYKPFAAIYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGLVGADGPTHAGAFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLP  VVMA SDEAEL HMVATAAA DD P  FRYPRG G+GVELP   +G  L++GKG
Sbjct: 442 ACLPGFVVMAASDEAELRHMVATAAAYDDGPISFRYPRGEGMGVELP--ERGRVLDIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  EG +VALL +G  +  C  A+  L++ GL  TVADARF KPLD  L+  LA+ HEV
Sbjct: 500 IIRREGTKVALLSFGARLGECFKAADELDAAGLSTTVADARFAKPLDTDLVLRLAREHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFGSHV+  LA+ G LD  ++ R + LPD + D   P    AQAGL  + 
Sbjct: 560 LVTIEEGSVGGFGSHVLAALAEAGALDRGLRVRTMTLPDSFQDQDKPDALYAQAGLNATA 619

Query: 541 IAATVFNILG 550
           I   VF  LG
Sbjct: 620 ILTRVFEALG 629


>gi|409400110|ref|ZP_11250273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
 gi|409130838|gb|EKN00576.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidocella sp. MX-AZ02]
          Length = 646

 Score =  634 bits (1636), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 331/552 (59%), Positives = 406/552 (73%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN--NVVAVIGD 58
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV RDLK   +  NV+AVIGD
Sbjct: 95  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVARDLKKEADPRNVIAVIGD 154

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           G+M+AG AYEAMNNAG + S +IV+LNDN  +S+         PPVGA+S+ LS L S+R
Sbjct: 155 GSMSAGMAYEAMNNAGAMRSRLIVVLNDN-DMSI--------APPVGAMSAYLSTLISSR 205

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ A  + K+   P+   A K +EYARG+++G   TLFEELG YY+GP+DGHN++
Sbjct: 206 SFMSLRDFAAKMAKRFPRPIERTARKAEEYARGILTGG--TLFEELGFYYVGPIDGHNME 263

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+ +L  +++++   PVL+H+VT+KG+GY  AE AADKYHGV KF+  TG+Q K+    
Sbjct: 264 HLMPVLRNLRDSEANEPVLLHIVTQKGKGYAPAEAAADKYHGVQKFNVVTGEQKKAPPGP 323

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT+ FA+ALIAEAE D  VVA+ AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAA
Sbjct: 324 PTYTSVFAKALIAEAEADPAVVAVTAAMSPGTGLDKFEAKFPDRMFDVGIAEQHAVTFAA 383

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EGLKPFCAIYS+F+QR YDQ+VHDV LQ LPVRFAMDRAGLVGADG TH G++D+ 
Sbjct: 384 GMATEGLKPFCAIYSTFLQRGYDQLVHDVVLQSLPVRFAMDRAGLVGADGATHAGAYDLA 443

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  +P MV+MAPSDEAEL H VATAAAIDDRPS FRYPRG G+G+ELP   +G P E+G
Sbjct: 444 FLGPMPRMVIMAPSDEAELMHAVATAAAIDDRPSAFRYPRGEGLGIELP--ARGTPWEIG 501

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRIL EG +VA+L  GT +Q  L A+  L + G   TVADARF KPLD  LI  LA+ H
Sbjct: 502 KGRILREGGKVAILVLGTRLQDALNAADQLAAKGFPATVADARFMKPLDTDLIDQLARHH 561

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EVLIT+EEG+ GGFG+ V   LA  G  D  +K+RP+ LPDR IDH SPA Q+ +AGLT 
Sbjct: 562 EVLITIEEGAAGGFGAAVAHHLAWSGAFDKGLKFRPMTLPDRLIDHNSPAAQMIEAGLTA 621

Query: 539 SHIAATVFNILG 550
             IA      LG
Sbjct: 622 QDIATHALTALG 633


>gi|395785879|ref|ZP_10465607.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
 gi|423717226|ref|ZP_17691416.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
 gi|395424337|gb|EJF90524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th239]
 gi|395427441|gb|EJF93532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tamiae Th307]
          Length = 640

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 333/552 (60%), Positives = 398/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   L+   + NV+AVIGDG
Sbjct: 93  IRTLRQAGGLSGFTKRSESIYDPFGAGHSSTSISAGLGMAVASALENNTQRNVIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S+  
Sbjct: 153 SMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLVSSPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE AK +TK++     + A + +EYARG ++G   TLFEELG YYIGPVDGHN+D 
Sbjct: 204 YRTLRERAKALTKKLPKFFWDKAKRSEEYARGFLTGG--TLFEELGFYYIGPVDGHNLDH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE A+DKYHGV +FD  TGKQ K+++   
Sbjct: 262 LLPVLKNVRE-HPNGPVLVHVVTHKGKGYAPAEAASDKYHGVNRFDIVTGKQVKANSNAP 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  FA+ALI EA  D+ +V I AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKIFAKALIEEARHDEKIVGITAAMPTGTGLDAFGEVFPARMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EG KPF AIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAG VGADG TH GSFD  F
Sbjct: 381 MASEGYKPFVAIYSTFLQRGYDQIVHDVSIQNLPVRFAIDRAGFVGADGATHAGSFDTGF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G+ELP   +G  LE+GK
Sbjct: 441 LTALPGFVVMAPSDEVELMHMVRTAAAYDKGPISFRYPRGEGVGIELP--ERGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL +G +VAL+G+GT +Q  L A   L + GL  TVADARF KPLD  LIR LA++HE
Sbjct: 499 GRILKQGTKVALIGFGTRLQEALLAGEELGAAGLSTTVADARFAKPLDEDLIRRLAQNHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EEG+ GGFG+ V+QFLAQDGLLD  +K R L LPD Y+ HG     LAQ GL   
Sbjct: 559 VLITIEEGASGGFGAQVLQFLAQDGLLDKGLKIRSLTLPDDYLQHGPQEMVLAQIGLDRY 618

Query: 540 HIAATVFNILGQ 551
            I   VF  LG+
Sbjct: 619 GIIQAVFAALGR 630


>gi|452821339|gb|EME28371.1| 1-deoxy-D-xylulose-5-phosphate synthase [Galdieria sulphuraria]
          Length = 804

 Score =  634 bits (1634), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 336/616 (54%), Positives = 416/616 (67%), Gaps = 68/616 (11%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+R+  GLSGFTKR+ESEYD FG GHSSTSISA LGMA  RDL G++N+ +AVIGDG 
Sbjct: 187 MLTLRKYGGLSGFTKRAESEYDPFGAGHSSTSISAALGMATARDLSGKRNHCIAVIGDGG 246

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNRP 119
           +T G AYEAMNN GYL+  +IVILNDN QVSLPT T   G + P GALS   +RL S+ P
Sbjct: 247 ITGGMAYEAMNNCGYLNHRVIVILNDNNQVSLPTGTKTAGGVSPAGALSKYTNRLLSSSP 306

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
              +R +AK +++     +   AAK DEYAR + +G G TLFEELG YY+GPVDGH+++D
Sbjct: 307 FLNIRSLAKDLSRIFPHQVQGFAAKADEYARTLFTGGG-TLFEELGFYYVGPVDGHSLED 365

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK-----S 234
           L+ ILE V++     PVLIHV TEKGRGYP AEKA DKYHGV  FD  TGK  K     S
Sbjct: 366 LIPILENVRDMHVNKPVLIHVKTEKGRGYPPAEKALDKYHGVTSFDVETGKPLKKQDVKS 425

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           S+   +Y+T FA  LI EAE D+ +VAI AAM GGTGLNLF  +FP+RCFDVGIAEQHAV
Sbjct: 426 SSAPLNYSTIFANTLIREAEEDRKIVAITAAMPGGTGLNLFGEKFPSRCFDVGIAEQHAV 485

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFAAGLA EG KPFC IYS+F+QR YDQV+HDV LQ LPVRF +DRAG+VG DG TH GS
Sbjct: 486 TFAAGLASEGYKPFCCIYSTFLQRGYDQVIHDVALQSLPVRFMIDRAGMVGDDGSTHQGS 545

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--------- 405
           +D+T++ C+PN+V+MA S+E EL +MV T+ +ID +PS  RYPRG G+G+E         
Sbjct: 546 YDLTYLGCIPNIVIMAASNEIELMNMVVTSLSIDGKPSAVRYPRGVGVGIETLVTKLGYQ 605

Query: 406 -----LPPGNKGIPLEVGKGRILIEG--------------ER------------------ 428
                LP   +G  L++GKGR++  G              ER                  
Sbjct: 606 LEDQKLP--ERGSVLKIGKGRLVRRGRFREGKNSTQEGLIERRLARQSNSGATDLYSAEK 663

Query: 429 ----------VALLGYGTAVQSCLAASALLES--NGLRLTVADARFCKPLDHALIRSLAK 476
                     VALL  GT + SC+ A+  LES    L +TVADARF KPLD  LI  L K
Sbjct: 664 DNSSLYRKTHVALLSLGTRLVSCVDAAVHLESLDEQLAVTVADARFMKPLDIELIDYLVK 723

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAG 535
            +E+LITVEE SIGGFGSHVVQ+L+Q+G LD G +K+R +V+PD++I+HGS  +Q  +AG
Sbjct: 724 QNEILITVEENSIGGFGSHVVQYLSQNGYLDTGNLKFRSMVIPDKFIEHGSQGEQYDEAG 783

Query: 536 LTPSHIAATVFNILGQ 551
           L    IA TV  ++G+
Sbjct: 784 LQSHQIATTVLRLVGK 799


>gi|395790245|ref|ZP_10469739.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
 gi|395426896|gb|EJF93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella taylorii 8TBB]
          Length = 640

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 320/552 (57%), Positives = 403/552 (73%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGM+V   LK   + N+++VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMSVASALKVETRRNIISVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K ++K++     E A + +E+ARG + G   TLF+ELG YY+GP+DGHN++ 
Sbjct: 204 YRSLRERVKVLSKKLPKFFGEKARRSEEFARGFLVGG--TLFDELGFYYVGPIDGHNLEH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV  FD  TGKQ  + + + 
Sbjct: 262 LLPVLKNVREYPY-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQINTQSNSL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  ++ I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEASHDDKIIGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           ++ LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LSTLPEFVVMAPSDEVELMHMVRTAAAYDQGPLSFRYPRGEGVGIDLP--ERGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG R+AL+ +GT +   L A+ +LE  GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRILREGSRIALVCFGTRMSEVLMAAGMLEEEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+H++QFLAQ+GLL+  +K R L LPD Y++HGSP   L++ GL   
Sbjct: 559 VLVTIEEGAMGGFGAHLLQFLAQEGLLEHGLKVRTLKLPDEYLNHGSPEKVLSRIGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIINTVFTALGR 630


>gi|121602344|ref|YP_988719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           KC583]
 gi|421760528|ref|ZP_16197344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           INS]
 gi|166198602|sp|A1URW6.1|DXS_BARBK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120614521|gb|ABM45122.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           KC583]
 gi|411174945|gb|EKS44972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella bacilliformis
           INS]
          Length = 638

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 328/560 (58%), Positives = 404/560 (72%), Gaps = 16/560 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMA+   LK   + NV+AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESIYDPFGAGHSSTSISAGLGMAMASALKAEERRNVIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K  +K+      E A++ +E+ARG + G   TLF+ELG YY+GP+DGHN + 
Sbjct: 204 YRHLRERIKLFSKKFPKFFSEQASRSEEFARGFLVGG--TLFDELGFYYVGPIDGHNFEH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE++ADKYHGV +FD  TGKQ K+ +   
Sbjct: 262 LLPVLKNVR-AYPNGPVLVHVVTHKGKGYAPAEESADKYHGVNRFDVVTGKQVKAQSTRL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  +VAI AAM  GTGL+ F  +F  R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEATHDHKIVAITAAMPTGTGLDSFAEKFSDRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAA  D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LATLPEFVVMAPSDEVELMHMVRTAAVYDQGPISFRYPRGEGIGMDLP--QRGEVLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG RVAL+ +GT +   L A+  L + G+  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLREGSRVALVCFGTQLSEVLVAADELAAEGISTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           V IT+EEG+IGGFG+HV+QFLAQ+ LL+  +K R L LPD Y++HGSP   L++ GL   
Sbjct: 559 VFITIEEGAIGGFGAHVLQFLAQEALLEHGLKVRTLRLPDEYLNHGSPEKILSRVGLDAK 618

Query: 540 HIAATVFNILG-QTREALEI 558
            I   VF  LG +TR+ L+I
Sbjct: 619 GIINAVFTSLGYETRKTLQI 638


>gi|395778555|ref|ZP_10459067.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           Re6043vi]
 gi|423715133|ref|ZP_17689357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           F9251]
 gi|395417763|gb|EJF84100.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           Re6043vi]
 gi|395430617|gb|EJF96659.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella elizabethae
           F9251]
          Length = 635

 Score =  632 bits (1631), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 321/552 (58%), Positives = 402/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + N++AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAEIRRNIIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IV+LNDN  +S+         PP GA+S  L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVVLNDN-DMSIA--------PPTGAMSGHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K +++++     + A + +E+ARG++ G   TLF+ELG YY+GP+DGHN   
Sbjct: 204 YRHLRERVKILSEKLPKFFLDKARRSEEFARGLLVGG--TLFDELGFYYVGPIDGHNFGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GYP AE ++DKYHGV +FD  TG+Q K+ +   
Sbjct: 262 LLPVLKNVRQYPN-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGRQVKAPSNIL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +V I AAM  GTGL+ F  +FP + FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEASHDDKIVGITAAMPTGTGLDAFAEKFPKKMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 LACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LATLPEFVVMAPSDELELMHMVRTAAAYDQGPISFRYPRGEGIGIDLP--KRGEILEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG+R+AL+ +GT +   L A+ +LE+ GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLREGDRIALVCFGTRMSEVLRAAEMLEAKGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K R L LPD Y++HGSP   L+  GL   
Sbjct: 559 VLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKLPDEYLNHGSPEKVLSTIGLDAM 618

Query: 540 HIAATVFNILGQ 551
            I  TV   LG+
Sbjct: 619 GIVNTVLTALGR 630


>gi|399039198|ref|ZP_10734847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
 gi|398062884|gb|EJL54649.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF122]
          Length = 638

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 323/551 (58%), Positives = 397/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVASELDKTDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ + L
Sbjct: 205 MGFRDFGKKLTAYLGKNVDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K      S
Sbjct: 263 LPVLRNVRDN-AEGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EAE+D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEAELDDKIVGITAAMPNGTGLDKLASVFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AAEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D  P  FRYPRG G+G+E+P   +G  L++GKG
Sbjct: 442 ATLPGFVVMAAADEAELKHMVRTAAAYDAGPISFRYPRGEGVGIEMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RVVKEGSKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHELIRQLARHHEI 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+IGGFGS V+QFLA DGLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 LITVEEGAIGGFGSQVIQFLAMDGLLDNGLKIRSLVMPDVWMEQAKPEVMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFKALGR 630


>gi|330814377|ref|YP_004358616.1| octaprenyl-diphosphate
           synthase/Dimethylallyltransferase/Geranyltranstransferas
           e [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487472|gb|AEA81877.1| octaprenyl-diphosphate synthase / Dimethylallyltransferase /
           Geranyltranstransferase (farnesyldiphosphate synthase) /
           Geranylgeranyl pyrophosphate synthetase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 636

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 310/559 (55%), Positives = 401/559 (71%), Gaps = 14/559 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ES+YD FG  HSSTSISAGLGMAV RDL+G+ N++++VIGDGA
Sbjct: 91  IRTLRQGGGLSGFTKRAESQYDPFGAAHSSTSISAGLGMAVARDLEGKNNSIISVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN  +S+         PPVGA+SS L++L S +  
Sbjct: 151 MSAGMAYEAMNNAGAMDSRLIVILNDN-DMSIA--------PPVGAMSSYLAKLLSGKKY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R   K ++ +  G + +   + +EY RGM    G TLFEE+G +Y+G VDGH+ D L
Sbjct: 202 IGFRNFFKKISDKFPGKLKQRIGQAEEYLRGM--AVGGTLFEEMGFFYVGSVDGHSFDQL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE VKN+   GP LIH +T+KG+GY  AE + DKYHGV KF+ ATG+Q KSS+   S
Sbjct: 260 LPVLENVKNSTHEGPFLIHAITQKGKGYQPAEDSKDKYHGVTKFNVATGEQSKSSSNKPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F E L A A+ D  +VA+  AM  GTG+N+F ++FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTNVFGETLAAHAQQDNKIVAVTGAMPSGTGINIFQKQFPKRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADGPTH GSFD+T++
Sbjct: 380 ATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDITYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA SDEAEL  M+ T+  I+DRP  FRYPRGNGIG+ELP  ++   L++GKG
Sbjct: 440 ATLPNFVVMAASDEAELVRMINTSVDINDRPCAFRYPRGNGIGIELPSIDE--KLKIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  V +L  GT ++ C  A+  L++ G+  T+ DARF KPLD  LI   A+ HE+
Sbjct: 498 RVVQEGTNVCILSLGTRLEECKIAAKELKNKGISTTIVDARFAKPLDEELIIRCAREHEM 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGSHV   LA+ G+ D  +K+R L+LPD +ID  +P      AGL    
Sbjct: 558 LITIEEGSIGGFGSHVANLLAEKGIFDKGLKFRSLMLPDVFIDQDTPEKMYDVAGLNAKQ 617

Query: 541 IAATVFNILGQTREALEIM 559
           I   + ++   ++EA++I+
Sbjct: 618 IKEKILDVF-FSKEAIKII 635


>gi|405378915|ref|ZP_11032824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
 gi|397324517|gb|EJJ28873.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CF142]
          Length = 638

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 323/551 (58%), Positives = 396/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  D+      V+AVIGDGA
Sbjct: 94  IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAADIDKTDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 LSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K      S
Sbjct: 263 LPVLRNVRD-NANGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQAKVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE L+ EA +D  VV I AAM  GTGL+ F   FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTNVFAETLVQEATLDDRVVGITAAMPTGTGLDKFAEIFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  LE+GKG
Sbjct: 442 ATLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMP--ERGQILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDHALIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHALIRQLARHHEI 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGS V+QF+A DGLLD  +K R LV+PD +++   P   +A AGL  + 
Sbjct: 560 LITVEEGSVGGFGSQVMQFMAMDGLLDRGLKVRSLVMPDIWMEQAKPEAMIAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVFN LG+
Sbjct: 620 IVSTVFNALGR 630


>gi|49475232|ref|YP_033273.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella henselae str.
           Houston-1]
 gi|81648131|sp|Q6G4D1.1|DXS_BARHE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|49238037|emb|CAF27244.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella henselae str.
           Houston-1]
          Length = 640

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 325/552 (58%), Positives = 400/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN-NVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK  K  N+VAVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAEKRRNIVAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG L++ +IV+LNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALNARLIVVLNDN-DMSIA--------PPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K + +++     + A + +E+ARG + G   TLFEELG YY+GP+DGHN+  
Sbjct: 204 YRSLRERVKVLGEKLPKFFLDKARRSEEFARGFLVGG--TLFEELGFYYVGPIDGHNLKH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+   T GPVLIHVVT KG+GY  AE + DKYHGV +FD  TGKQ K+S+   
Sbjct: 262 LLPVLKNVREYPT-GPVLIHVVTHKGKGYAPAEASLDKYHGVNRFDIITGKQVKASSNVL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++AL  EA  D  +VAI AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALREEASYDDKIVAITAAMPTGTGLDFFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 MACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LTTLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGIGMDLP--QRGEILEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG R+AL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRILHEGNRIALVCFGTRISEVLVAADELSAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K R L LPD Y++HGS    L++ GL   
Sbjct: 559 VLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKLPDEYLNHGSQEKVLSRIGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TVF+ LG+
Sbjct: 619 GIVNTVFSALGR 630


>gi|240850082|ref|YP_002971475.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
           as4aup]
 gi|240267205|gb|ACS50793.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Bartonella grahamii
           as4aup]
          Length = 635

 Score =  630 bits (1625), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 321/552 (58%), Positives = 405/552 (73%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + N++AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAETRRNIIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IV+LNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVVLNDN-DMSIA--------PPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K +++++     + A + +E+ARG++ G   TLF+ELG YY+GP+DGHN+  
Sbjct: 204 YRHLRERVKMLSEKLPKFFLDKARRSEEFARGLLVGG--TLFDELGFYYLGPIDGHNLGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+   + GPVL+HVVT KG+GYP AE + DKYHGV +FD  TGKQ K+S+   
Sbjct: 262 LLPVLKNVREYPS-GPVLVHVVTHKGKGYPPAEASPDKYHGVNRFDVTTGKQVKASSNIL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +V I AAM  GTGL+ F ++FP + FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEARHDDKIVGITAAMPTGTGLDSFAKKFPEKMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 LACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           ++ LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LSTLPGFVVMAPSDELELMHMVRTAAAYDQGPISFRYPRGEGIGIDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG R+AL+ +GT +   L A+  LE+ GL  TVADARF KPLD  L+  LA+ HE
Sbjct: 499 GRVLREGNRIALVCFGTRMSEVLQAADALEAEGLSTTVADARFAKPLDKDLMCRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K R L LPD Y++HG+P   L++ GL   
Sbjct: 559 VLVTIEEGAIGGFGAHILQFLAQEGLLEHGLKARTLKLPDEYLNHGAPEKVLSRIGLDAM 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIVNTVFAALGR 630


>gi|217976903|ref|YP_002361050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylocella silvestris
           BL2]
 gi|217502279|gb|ACK49688.1| deoxyxylulose-5-phosphate synthase [Methylocella silvestris BL2]
          Length = 642

 Score =  630 bits (1624), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 320/554 (57%), Positives = 399/554 (72%), Gaps = 19/554 (3%)

Query: 9   GLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYE 68
           GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L GR  NV+AVIGDGAM+AG AYE
Sbjct: 101 GLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVANTLSGRPGNVIAVIGDGAMSAGMAYE 160

Query: 69  AMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAK 128
           AMNNAG + S +I+ILNDN  +S+         PP GALSS L+RL S    R +RE AK
Sbjct: 161 AMNNAGAMHSRLIIILNDN-DMSIA--------PPAGALSSYLARLVSGDAYRSVREAAK 211

Query: 129 GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVK 188
            + + +   +++ A K +E+AR   +G   TLFEELG+YY+GP+DGHN+D ++ +L+ V+
Sbjct: 212 QLGRLLPRFVYDRARKTEEFARNFWAGG--TLFEELGIYYVGPIDGHNLDQMLPVLKNVR 269

Query: 189 NTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEA 248
           + K TGP+L+HVVT+KG+GY  AE   DKYH V  FD  TGKQ K       YT+ FAE+
Sbjct: 270 DFKETGPILVHVVTQKGKGYAPAEATHDKYHAVNMFDVVTGKQVKPKPNAPVYTSVFAES 329

Query: 249 LIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPF 308
           L+ EA  D  +VAI AAM  GTGL++F + FP R FDVGIAEQHAVTFAAGLA EG KPF
Sbjct: 330 LVKEAAKDDKIVAITAAMPSGTGLDIFQKTFPERTFDVGIAEQHAVTFAAGLATEGFKPF 389

Query: 309 CAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVV 368
           C IYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD++F+  LPNMVV
Sbjct: 390 CTIYSTFLQRGYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDISFLGILPNMVV 449

Query: 369 MAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER 428
           MA +DE+EL HMVATAAA D+ P   RYPRG G+G+++P   +G+PLE+G+GRI+ EG++
Sbjct: 450 MAAADESELVHMVATAAAYDEGPIALRYPRGEGVGIDMP--IEGVPLEIGRGRIMREGKQ 507

Query: 429 VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS 488
           VA+L +G  +   + A+  L + G+  TVADARF KPLD  LI  LA SHE LIT+EEGS
Sbjct: 508 VAILSFGARLAEVMKAADELAALGVSTTVADARFAKPLDEELIMRLASSHEALITIEEGS 567

Query: 489 IGGFGSHVVQFLAQDGLLDGT----VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAAT 544
           +GGFGS V Q L   G LDG     +K+R +VLPD ++DH  P    AQAGL    I A 
Sbjct: 568 VGGFGSFVAQKLTDSGALDGLGARPLKFRSMVLPDLFLDHDKPEKLYAQAGLDAKAIVAK 627

Query: 545 VFNILGQTREALEI 558
           V ++LG  REAL++
Sbjct: 628 VLSVLG--REALDV 639


>gi|319408216|emb|CBI81869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella schoenbuchensis
           R1]
          Length = 640

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 321/552 (58%), Positives = 400/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + N++ VIGDG
Sbjct: 93  IRTLRQDGGLSGFTKRSESVYDSFGAGHSSTSISAGLGMAVASMLKAEERRNIICVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K ++K++     + A   +E+ARG + G   +LFEELG YY+GP+DGHN++ 
Sbjct: 204 YRSLREQVKILSKKLPKFFSDKARLSEEFARGFLVGG--SLFEELGFYYVGPIDGHNMNH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TGKQ K+ ++  
Sbjct: 262 LLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEVSSDKYHGVNRFDVVTGKQVKTQSKFL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +VAI AAM  GTGL+ F  +FP + FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEASHDDKIVAITAAMPTGTGLDSFAEKFPDKMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG   G++LP   +G  LE+GK
Sbjct: 441 LATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGESSGIDLP--QRGEVLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG ++AL+ +GT +   L A+  L + GL  TVADARF KPLD  LIR LA+ HE
Sbjct: 499 GRILCEGSKIALVCFGTRLSEVLIAANELAAEGLSTTVADARFAKPLDKDLIRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+HV+QFLAQ+GLL+  +K R L  PD Y++HGSP   L+  GL  +
Sbjct: 559 VLVTIEEGAMGGFGAHVLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSPNKVLSSIGLDAT 618

Query: 540 HIAATVFNILGQ 551
            I  TVFN LG+
Sbjct: 619 GIINTVFNALGR 630


>gi|395787324|ref|ZP_10466925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
           LL-WM9]
 gi|395411748|gb|EJF78269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella birtlesii
           LL-WM9]
          Length = 638

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 321/552 (58%), Positives = 404/552 (73%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGM+V   LK   K NV+A+IGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMSVASALKAETKRNVIAIIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG L++ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALNARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K + +++     + A   +E+ARG++ G   TLFEELG YY+GP+DGHN+  
Sbjct: 204 YRSLRERVKLLGEKLPRFFLDKARLSEEFARGLLVGG--TLFEELGFYYVGPIDGHNLKH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TGKQ K+ +R  
Sbjct: 262 LLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDITTGKQVKTPSRAL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +V+I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEATHDDKIVSITAAMPTGTGLDAFAEKFPKRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH G+FD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGNFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGVGIDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG RVAL+ +GT +   L A+ +L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRLLREGNRVALVCFGTRMPEVLEAADVLGAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+H++QFLAQ+GLL+  +K R L LPD Y++HGSP   L++ GL  +
Sbjct: 559 VLVTIEEGAVGGFGAHLLQFLAQEGLLEQGLKVRTLKLPDEYLNHGSPEKVLSRIGLDVT 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIVNTVFTALGR 630


>gi|262277462|ref|ZP_06055255.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB114]
 gi|262224565|gb|EEY75024.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB114]
          Length = 636

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 307/549 (55%), Positives = 389/549 (70%), Gaps = 13/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FGT HSSTSISAGLGM+V RDL G+ NN+++VIGDGA
Sbjct: 91  IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAGLGMSVARDLDGKTNNIISVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN  +S+         PPVGA+SS L++L S    
Sbjct: 151 MSAGMAYEAMNNAGSMDSRLIVILNDN-DMSIA--------PPVGAMSSYLAKLLSGNKY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE  K ++ +    + +   + +EY RG+    G TLFEE+G +Y+G VDGHN D L
Sbjct: 202 IGFREFFKKLSNKFPKSLKKSIGQAEEYLRGL--AVGGTLFEEMGFFYVGTVDGHNFDHL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE VKN+K  GP LIH +TEKG+GY  AE + D+YHGV KF+  TG+Q KS +   S
Sbjct: 260 LPVLENVKNSKHEGPFLIHAITEKGKGYKPAEDSKDRYHGVTKFNVETGEQSKSKSNIPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F E L   AE D  +V + AAM  GTG+N+F  +FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTSVFGETLTKHAEKDSKIVTVTAAMPSGTGVNIFQNKFPKRSFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KP+ AIYS+F+QRAYDQVVHDV +QKLPVRFA+DRAGLVGADG TH G+FD+T++
Sbjct: 380 ATEGYKPYAAIYSTFLQRAYDQVVHDVAIQKLPVRFAIDRAGLVGADGSTHAGAFDITYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN +VMA SDEAEL  M+ T+  I+D P  FRYPRGNG+G+ELP  N+ I  E+GKG
Sbjct: 440 STLPNFIVMAASDEAELVRMINTSVEINDTPCAFRYPRGNGVGLELPDINETI--EIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  V +L +GT ++ C  A+  L+S G+  T+ DARF KPLD  LI   A+ HE+
Sbjct: 498 RIIQEGSTVCILNFGTRLEECKIAAKQLDSKGITTTIVDARFAKPLDQDLILRCAREHEM 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEGSIGGFGSHV   L++ G  D  +K+R + LPD +ID  +P      AGL    
Sbjct: 558 IITIEEGSIGGFGSHVSHLLSEKGFFDKGLKFRSMTLPDIFIDQDTPEKMYDIAGLNAKQ 617

Query: 541 IAATVFNIL 549
           IA  + N+ 
Sbjct: 618 IAEKIENVF 626


>gi|422294553|gb|EKU21853.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nannochloropsis gaditana
           CCMP526]
          Length = 842

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 331/576 (57%), Positives = 410/576 (71%), Gaps = 35/576 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK-NNVVAVIGDG 59
           MH++RQT+GLSGF KRSESEYD FG GHSSTSISA LGM+VG+ L  ++ NN VAVIGDG
Sbjct: 206 MHSLRQTNGLSGFAKRSESEYDAFGAGHSSTSISAALGMSVGKLLTNKRVNNCVAVIGDG 265

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNR 118
           A+T G A+EA+NNAGYL S M+VILNDN QVSLPT T   G + P GALSS  SRL S++
Sbjct: 266 AITGGMAFEALNNAGYLRSRMVVILNDNGQVSLPTGTHSAGGVVPAGALSSYTSRLLSSK 325

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
           P ++ R  AKG+ + +   + ++ AK+DEYARG+I G   TLFEELG YYIGPVDGH++D
Sbjct: 326 PFQDFRSFAKGLNRLMPSEIQDINAKLDEYARGLIQGG--TLFEELGFYYIGPVDGHDLD 383

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LV ILE ++++ +T PVL+HV TEKG GYP AE A+DKYHGVAKFD +TG+QFK   + 
Sbjct: 384 NLVPILENLRDSPSTKPVLLHVKTEKGYGYPPAEVASDKYHGVAKFDVSTGRQFKGGNKG 443

Query: 239 Q--SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              S TT FA AL   A  D+ VV I AAM GGTG+++F +RFP R FDVGIAEQHAVTF
Sbjct: 444 APLSLTTTFANALCEIAAEDRTVVGITAAMPGGTGMDIFGKRFPKRTFDVGIAEQHAVTF 503

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+A EGLKPFC IYS+FMQR YDQV+HDV +QKLPVR  +DRAGLVG DGPTH GSFD
Sbjct: 504 AAGMAIEGLKPFCCIYSTFMQRGYDQVIHDVVIQKLPVRMILDRAGLVGNDGPTHHGSFD 563

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV------------ 404
           ++++  LP++V+MAPSDE EL +++ TA   +D PS  RYPRG G G+            
Sbjct: 564 LSYLGALPDIVIMAPSDELELMNLLETAYETNDLPSVVRYPRGAGYGLETLKSELGYEGL 623

Query: 405 -ELPPGNKGIPLEVGKGRILIEGE-----------RVALLGYGTAVQSCLAASALLESN- 451
            ELP   +G  +  GKGRI+               RVALL  GT +   + A+  +E N 
Sbjct: 624 EELP--KRGKAVARGKGRIIRRSAVVPSTAAPGTCRVALLSVGTRLLDTVHAAKEIEENL 681

Query: 452 -GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GT 509
            G+ +TVADARF KPLD  ++ SLA  H+VLITVEE S+GGFGS V QFL  +GLLD G 
Sbjct: 682 PGVSVTVADARFVKPLDKEMVSSLAMEHDVLITVEENSVGGFGSFVQQFLLNEGLLDGGK 741

Query: 510 VKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 545
           ++ R +VLPDR+I+ G  +DQ  QAGL   HI   V
Sbjct: 742 LRLRSMVLPDRFIEAGPQSDQYDQAGLAARHIVEKV 777


>gi|395780213|ref|ZP_10460680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           085-0475]
 gi|395419480|gb|EJF85780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           085-0475]
          Length = 640

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 320/552 (57%), Positives = 400/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + N++AVIGDG
Sbjct: 93  IRTLRQDGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAEERRNIIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K +++++     + A + +E+ARG + G   TLF+ELG YY+GP+DGHN   
Sbjct: 204 YRNLRERVKILSEKLPKFFLDKARRSEEFARGFLVGG--TLFDELGFYYVGPIDGHNFGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TGKQ K+ +   
Sbjct: 262 LLPVLKNVREYPD-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIVTGKQIKTQSNAL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  +V+I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEASHDDKIVSITAAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LTTLPEFVVMAPSDEIELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGEVLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG R+AL+ +G  +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLREGNRIALVCFGARMTEVLVAADELRAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+H++QFLAQ+GLL+  +K R L LPD Y+DHGSP   L++ GL   
Sbjct: 559 VLVTIEEGAMGGFGAHLLQFLAQEGLLEHGLKVRTLKLPDEYLDHGSPKTVLSRIGLDAL 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIINTVFTALGR 630


>gi|409436325|ref|ZP_11263509.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
           FAD-requiring [Rhizobium mesoamericanum STM3625]
 gi|408751882|emb|CCM74661.1| 1-deoxyxylulose-5-phosphate synthase,thiamine-requiring,
           FAD-requiring [Rhizobium mesoamericanum STM3625]
          Length = 640

 Score =  627 bits (1616), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 322/551 (58%), Positives = 397/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L      V+AVIGDGA
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVASELDKTDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ + L
Sbjct: 205 MGFRDFGKKLTAYLGKNVDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K      S
Sbjct: 263 LPVLRNVRD-NANGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EAE+D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEAELDDKIVGITAAMPNGTGLDKLASVFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AAEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D  P  FRYPRG G+G+E+P   +G  L++GKG
Sbjct: 442 ATLPGFVVMAAADEAELKHMVRTAAAYDAGPISFRYPRGEGVGIEMP--VRGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGAKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEI 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFGS V+QFLA DGLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 LITVEEGAVGGFGSQVMQFLATDGLLDNGLKIRSLVMPDIWMEQAKPEVMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF +LG+
Sbjct: 620 IVSTVFKVLGR 630


>gi|395781816|ref|ZP_10462227.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
           rattimassiliensis 15908]
 gi|395420471|gb|EJF86747.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella
           rattimassiliensis 15908]
          Length = 635

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 319/552 (57%), Positives = 401/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN-NVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   L+  K  NV+AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALRAEKRRNVIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IV+LNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVVLNDN-DMSIA--------PPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K +++++     + A + +  ARG++ G   TLF ELG YY+GP+DGHN++ 
Sbjct: 204 YRHLRERVKLLSEKLPKFFLDKARRSEGIARGLLVGG--TLFNELGFYYVGPIDGHNLEH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ ++     GPVL+HV+T KG+GYP AE + DKYHGV +FD  TGKQ K S+   
Sbjct: 262 LLPVLKNIRECPK-GPVLVHVITHKGKGYPPAEASFDKYHGVNRFDITTGKQVKVSSNIL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++AL+ EA  D  ++ I AAM  GTGL+ F  +FP + FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALLEEACHDDKIIGITAAMPTGTGLDSFAEKFPEKMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 LACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  +VMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LATLPEFIVMAPSDELELMHMVRTAAAYDQGPISFRYPRGEGMGIDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG R+AL+ +G  +   L A+  LE+ GL  TVADARF KPLD  L+R LA  HE
Sbjct: 499 GRILREGNRIALVCFGARMSEVLQAADALEAEGLSTTVADARFAKPLDKDLMRRLAYEHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K R L LPD+Y++HGSP   L++ GL   
Sbjct: 559 VLVTIEEGAIGGFGAHILQFLAQEGLLEHGLKVRTLKLPDKYLNHGSPEKVLSRVGLDAI 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GILNTVFTTLGR 630


>gi|424873984|ref|ZP_18297646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae WSM1455]
 gi|393169685|gb|EJC69732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae WSM1455]
          Length = 638

 Score =  626 bits (1615), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 321/551 (58%), Positives = 395/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKSDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDNGR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDGGPISFRYPRGEGVGVDMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV+ FLA +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 VITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRALVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFRALGR 630


>gi|154248651|ref|YP_001419609.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xanthobacter autotrophicus
           Py2]
 gi|229836094|sp|A7IPK6.1|DXS_XANP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|154162736|gb|ABS69952.1| deoxyxylulose-5-phosphate synthase [Xanthobacter autotrophicus Py2]
          Length = 643

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 331/562 (58%), Positives = 408/562 (72%), Gaps = 19/562 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV RDL G + NVV VIGDGA
Sbjct: 93  IRTLRQGGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVARDLSGEERNVVCVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +DS +IVILNDN  +S+         PP GA+S+ L+RL S +  
Sbjct: 153 MSAGMAYEAMNNAGAMDSRLIVILNDN-DMSIA--------PPTGAMSAYLARLISGQTY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE+ K +   +   +   AA+ +E+ARG  +G   TLFEELG YY+GP+DGHN+D L
Sbjct: 204 RSLREIGKQIAGHLPKFVERGAARAEEFARGFWTGG--TLFEELGFYYVGPIDGHNLDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ KT GP+L+HVVT+KG+GY  AE +ADKYHGV KFD  TG Q K+ +   S
Sbjct: 262 LPVLKNVRDAKT-GPILVHVVTQKGKGYAPAEASADKYHGVVKFDVVTGAQVKAKSNAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI++A  D  VVAI AAM  GTGL+LF + +P R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTRVFAESLISQARHDPKVVAITAAMPSGTGLDLFGQVYPERTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG TH G+FD+ F+
Sbjct: 381 AAEGFKPFCALYSTFLQRAYDQVVHDVALQGLPVRFIIDRAGLVGADGATHAGAFDIAFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLP M VMAP+DEAEL HM+AT  A DD PS  R+PRG G+GVE P   +G  L +GKG
Sbjct: 441 ACLPGMTVMAPADEAELVHMMATMVAFDDGPSAVRFPRGEGVGVERP--ERGEVLPIGKG 498

Query: 421 RILI---EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           RI+    EG+ +ALL  GT + +CL A+  LE+ G  +TVADARF KPLD  L+  LA  
Sbjct: 499 RIVHGTGEGD-IALLSLGTRLAACLDAAERLEAAGFTVTVADARFAKPLDRELVLKLAAG 557

Query: 478 HEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           H  L+TVEEGS+GGFGSHV+Q +  +GLLD G VK R +VLPD YID  + A QLA AGL
Sbjct: 558 HGALVTVEEGSVGGFGSHVLQLVTDEGLLDRGAVKVRAMVLPDIYIDQETQARQLAAAGL 617

Query: 537 TPSHIAATVFNILGQTREALEI 558
               I A V  +LG+ +  + +
Sbjct: 618 DADAIVAKVEGLLGKAKAGVSL 639


>gi|395766960|ref|ZP_10447498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
           12862]
 gi|395415572|gb|EJF82006.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella doshiae NCTC
           12862]
          Length = 640

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 319/552 (57%), Positives = 392/552 (71%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ DGLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + NV+AVIGDG
Sbjct: 93  IRTLRQEDGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAEMRRNVIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN              PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDNDM---------SIAPPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K  ++++     + A + +E+AR    G   TLF+ELG YY+GP+DGHN++ 
Sbjct: 204 YRNLRERVKMFSEKLPKFFLDKARRSEEFARSFFVGG--TLFDELGFYYVGPIDGHNLNH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+H+VT KG+GY  AE ++DKYHGV  FD  TGKQ K  +   
Sbjct: 262 LLPVLKNVREYPN-GPVLVHIVTHKGKGYAPAEASSDKYHGVNSFDIVTGKQIKIQSNAL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  +V I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEASHDDKIVGITAAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LTTLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGIGLDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG R+AL+ +GT +   L+A+  L   GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLREGNRIALICFGTRMSEVLSAADALVVEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QF  Q+GLL+  +K R L LPD Y++HGSP   LA+ GL   
Sbjct: 559 VLVTIEEGAIGGFGAHLLQFFVQEGLLERGLKVRTLKLPDEYLNHGSPEKVLARVGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TV   LG+
Sbjct: 619 GIVNTVLTALGR 630


>gi|83951989|ref|ZP_00960721.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
           ISM]
 gi|83836995|gb|EAP76292.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius nubinhibens
           ISM]
          Length = 621

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 320/557 (57%), Positives = 400/557 (71%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           M T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 73  MRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGASETGHGDAIAVI 132

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L   MIVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 133 GDGAMSAGMAFEAMNNAGHLKKRMIVILNDN-EMSIA--------PPVGALSSYLSRLYA 183

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG    + GP  E A +  +  +G+    G TLFEELG  Y+GP+DGH+
Sbjct: 184 EAPFQELKAAAKGAVSLLPGPFQEGAKRARDMLKGL--AVGGTLFEELGFSYLGPIDGHD 241

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  V++ + TGP+LIHV+T+KG+GY  AE A D  H  AKFD  TGKQ KS +
Sbjct: 242 MDQLLPVLRTVQD-RATGPILIHVLTKKGKGYGPAEAARDGGHATAKFDVVTGKQKKSPS 300

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  F++A++A A  D+ + A+ AAM  GTGL LF  R+P+RCFDVGIAEQHAVTF
Sbjct: 301 NAPSYTAVFSDAILAHAAEDQRICAVTAAMPDGTGLKLFEERYPSRCFDVGIAEQHAVTF 360

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA  GL+PFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GS+D
Sbjct: 361 AAGLAAGGLRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSYD 420

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V F+A LP MVVMA +DEAEL HMVATAAA D+ P  FRYPRG G+GVE+P  ++G+PLE
Sbjct: 421 VAFLANLPGMVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGEGVGVEMP--DRGVPLE 478

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG+ VA+L +GT +     A+  L + G+  T+ADARF KPLD  +I  LA 
Sbjct: 479 IGKGRIIQEGKGVAILSFGTRLGEVRRAAEALGARGITPTIADARFAKPLDRDMILDLAA 538

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q L+++G+ D  +K+R +VLPD +ID  SP D    AGL
Sbjct: 539 RHEALITIEEGAVGGFGSHVAQLLSEEGVFDHGLKFRQMVLPDIFIDQASPEDMYRVAGL 598

Query: 537 TPSHIAATVFNILGQTR 553
           +   I A V  +LG  R
Sbjct: 599 SAEDIEAKVLELLGVAR 615


>gi|395791326|ref|ZP_10470784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
           382]
 gi|395408689|gb|EJF75299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella alsatica IBS
           382]
          Length = 640

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 317/552 (57%), Positives = 398/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + N++AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKQEERRNIIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +I++LNDN              PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIIVLNDNDM---------SIAPPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K ++K++     E A + +E+ARG++ G   TLFEELG YY+GP+DGHN+  
Sbjct: 204 YRSLRERVKVLSKKLPKFFLEKARRSEEFARGLLVGG--TLFEELGFYYVGPIDGHNLRH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+   + GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TG+Q K+ +   
Sbjct: 262 LLPVLKNVREYPS-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIITGQQVKAPSNAL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +V+I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEAVHDDKIVSITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +Q+LPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQRLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           ++ LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LSTLPEFVVMAPSDEVELMHMVRTAAAYDQGPVSFRYPRGEGVGMDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG R+AL+ +GT +   L A+  L + GL  TV DARF KPLD  L+R LA+ HE
Sbjct: 499 GRILREGNRIALVCFGTRMSEVLVAADALGAEGLSTTVVDARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EEG+IGGFG+H++QFLAQ+GLL+  +K R L  PD Y++HG P   L++ GL   
Sbjct: 559 VLITIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGLPEKVLSRIGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIVNTVFTALGR 630


>gi|424880292|ref|ZP_18303924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WU95]
 gi|392516655|gb|EIW41387.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WU95]
          Length = 638

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 394/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKSDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDNGR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDGGPISFRYPRGEGVGVDMPA--RGEMLQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEI 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV+ FLA +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 VITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFKALGR 630


>gi|395784738|ref|ZP_10464560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
 gi|395421998|gb|EJF88220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella melophagi K-2C]
          Length = 640

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 320/552 (57%), Positives = 395/552 (71%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + N++ VIGDG
Sbjct: 93  IRTLRQDGGLSGFTKRSESVYDSFGAGHSSTSISAGLGMAVASMLKAEERRNIICVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN              PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDNDM---------SIAPPTGAMSAYLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K ++K++     + A   +E+ARG + G   +LFEELG YY+GP+DGHN++ 
Sbjct: 204 YRSLREQVKILSKKLPKFFSDKARLSEEFARGFLVGG--SLFEELGFYYVGPIDGHNMNH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TGKQ K+ ++  
Sbjct: 262 LLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEVSSDKYHGVNRFDVVTGKQVKTQSKFL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +VAI AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEASHDDKIVAITAAMPTGTGLDSFAEKFPDRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAA  D  P  FRYPRG   G++LP   +G  LE+GK
Sbjct: 441 LATLPEFVVMAPSDEVELMHMVRTAATYDQGPISFRYPRGESSGIDLP--QRGEVLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRIL EG ++AL+ +GT +   L A+  L + GL  TVADARF KPLD  LI  LA+ HE
Sbjct: 499 GRILCEGSKIALVCFGTRLSEVLIAANELAAEGLSTTVADARFAKPLDKDLILRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EEG++GGFG+HV+QFLAQ+GLL+  +K R L  PD Y++HGSP   L+  GL  +
Sbjct: 559 VLITIEEGAMGGFGAHVLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSPNKVLSSIGLDAT 618

Query: 540 HIAATVFNILGQ 551
            I  TVFN LG+
Sbjct: 619 GIINTVFNALGR 630


>gi|83953190|ref|ZP_00961912.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
           NAS-14.1]
 gi|83842158|gb|EAP81326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp.
           NAS-14.1]
          Length = 642

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 315/554 (56%), Positives = 395/554 (71%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG +V RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFSVARDLGGNVPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG AYEAMNNAG+L   M VILNDN ++S+         PPVGA+S+ LSRL +
Sbjct: 154 GDGSMSAGMAYEAMNNAGHLKKRMFVILNDN-EMSI--------APPVGAMSTYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++ +  AKG    + GP  E A +  +  +GM    G TLFE+LG  Y+GP+DGH+
Sbjct: 205 EEPFQDFKAAAKGAVSMLPGPFREGAKRAKDMLKGM--AVGGTLFEQLGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+ +L  VK  + TGPVLIHV+T+KG+GY  AE A DK H  AKF+  TG+Q K+ +
Sbjct: 263 LNQLLPVLRTVK-ARATGPVLIHVITKKGKGYGPAEAARDKGHATAKFNVLTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA++LIAEA  D  + A+ AAM  GTGLNLF  R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTRVFADSLIAEAAKDDKICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  G+KPFC +YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 382 SAGLAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V F+A LP+ VVMA +DEAEL HMVATAAA DD P  FR+PRG G GV +P   +G PLE
Sbjct: 442 VAFLANLPDFVVMAAADEAELVHMVATAAAYDDGPIAFRFPRGEGAGVTMP--ERGEPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG+RVALL +GT +     A+  L + G+  T+ADARF KPLD  +I SLA 
Sbjct: 500 IGKGRIIAEGKRVALLSFGTRLSEVEKAAEALRAKGITPTIADARFAKPLDREMILSLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SPAD  A AG+
Sbjct: 560 DHEALITIEEGAVGGFGSHVAQLLADEGVFDAGLKYRSMVLPDIFIDQASPADMYAVAGM 619

Query: 537 TPSHIAATVFNILG 550
              HI A V ++LG
Sbjct: 620 NAEHIEAKVLDVLG 633


>gi|49473998|ref|YP_032040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana str.
           Toulouse]
 gi|81647185|sp|Q6G0D4.1|DXS_BARQU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|49239501|emb|CAF25854.1| 1-deoxyxylulose-5-phosphate synthase [Bartonella quintana str.
           Toulouse]
          Length = 640

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 322/552 (58%), Positives = 396/552 (71%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN-NVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGM V   LK  K  N++AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMTVASALKAEKRRNIIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K  +K++     + A + +E+ARG + G   TLF+ELG YY+GP+DGHN+  
Sbjct: 204 YRSLRERIKMFSKKMPKFFLDKARRSEEFARGFLVGG--TLFDELGFYYVGPIDGHNLKH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV  FD  TGKQ K+ +   
Sbjct: 262 LLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQIKTQSNAL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F++ALI EA  D  +V I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 AYTKVFSKALIEEATHDNKIVGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQV+HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 MACEGYKPFVAIYSTFLQRAYDQVIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG RVAL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA  HE
Sbjct: 499 GRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+ VEEG+IGGFG+H++QFLA++GLL+  +K R L  PD Y++HGSP   L++ GL   
Sbjct: 559 VLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSRIGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIVNTVFTALGR 630


>gi|83942135|ref|ZP_00954597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
 gi|83847955|gb|EAP85830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfitobacter sp. EE-36]
          Length = 646

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 315/554 (56%), Positives = 395/554 (71%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG +V RDL G       + +AVI
Sbjct: 98  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFSVARDLGGNVPEGLGDAIAVI 157

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG AYEAMNNAG+L   M VILNDN ++S+         PPVGA+S+ LSRL +
Sbjct: 158 GDGSMSAGMAYEAMNNAGHLKKRMFVILNDN-EMSI--------APPVGAMSTYLSRLYA 208

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++ +  AKG    + GP  E A +  +  +GM    G TLFE+LG  Y+GP+DGH+
Sbjct: 209 EEPFQDFKAAAKGAVSMLPGPFREGAKRAKDMLKGM--AVGGTLFEQLGFSYLGPIDGHD 266

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+ +L  VK  + TGPVLIHV+T+KG+GY  AE A DK H  AKF+  TG+Q K+ +
Sbjct: 267 LNQLLPVLRTVK-ARATGPVLIHVITKKGKGYGPAEAARDKGHATAKFNVLTGEQKKAPS 325

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA++LIAEA  D  + A+ AAM  GTGLNLF  R+P+RCFDVGIAEQH VTF
Sbjct: 326 NAPSYTRVFADSLIAEAAKDDKICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTF 385

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  G+KPFC +YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 386 SAGLAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 445

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V F+A LP+ VVMA +DEAEL HMVATAAA DD P  FR+PRG G GV +P   +G PLE
Sbjct: 446 VAFLANLPDFVVMAAADEAELVHMVATAAAYDDGPIAFRFPRGEGAGVTMP--ERGEPLE 503

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG+RVALL +GT +     A+  L + G+  T+ADARF KPLD  +I SLA 
Sbjct: 504 IGKGRIIAEGKRVALLSFGTRLSEVEKAAEALRAKGITPTIADARFAKPLDREMILSLAA 563

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SPAD  A AG+
Sbjct: 564 DHEALITIEEGAVGGFGSHVAQLLADEGVFDAGLKYRSMVLPDIFIDQASPADMYAVAGM 623

Query: 537 TPSHIAATVFNILG 550
              HI A V ++LG
Sbjct: 624 NAEHIEAKVLDVLG 637


>gi|116250747|ref|YP_766585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|118595610|sp|Q1MKN4.1|DXS_RHIL3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115255395|emb|CAK06470.1| putative 1-deoxy-d-xylulose-5-phosphate synthase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 638

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 394/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKSDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDNGR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDGGPISFRYPRGEGVGVDMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV+ FLA +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 VITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFKALGR 630


>gi|423711167|ref|ZP_17685487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           Sb944nv]
 gi|395415081|gb|EJF81516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella washoensis
           Sb944nv]
          Length = 640

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 318/552 (57%), Positives = 400/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   + N++AVIGDG
Sbjct: 93  IRTLRQDGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAEERRNIIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K +++++     + A + +E+ARG + G   TLF+ELG YY+GP+DGHN+  
Sbjct: 204 YRNLRERVKILSEKLPKFFLDKARRSEEFARGFLVGG--TLFDELGFYYVGPIDGHNLGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TGKQ K+ +   
Sbjct: 262 LLPVLKNVREYPD-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIVTGKQIKTQSNAL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  +V+I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEASHDDKIVSITAAMPTGTGLDSFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LTTLPEFVVMAPSDEIELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGEVLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG R+AL+ +G  +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLREGNRIALVCFGARMTEVLVAADELRAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+H++QFLAQ+GLL+  +K R L  PD Y++HGSP   L++ GL   
Sbjct: 559 VLVTIEEGAMGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSPKTVLSRIGLDAL 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIINTVFTALGR 630


>gi|86356559|ref|YP_468451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CFN 42]
 gi|118595609|sp|Q2KBR2.1|DXS_RHIEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|86280661|gb|ABC89724.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli CFN
           42]
          Length = 638

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 319/549 (58%), Positives = 395/549 (71%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL+     V+AVIGDGA
Sbjct: 94  IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLEKTDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDN-ARGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 ATLPGFVVMAAADEAELKHMVRTAAAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL AS  LE+ GL  TVADARF KPLDH L+R LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLASEDLEAAGLSTTVADARFAKPLDHELLRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGS V+Q+L+ +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 LITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNIL 549
           I +TVF  L
Sbjct: 620 IVSTVFRAL 628


>gi|403530265|ref|YP_006664794.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
 gi|403232337|gb|AFR26080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella quintana RM-11]
          Length = 636

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 321/552 (58%), Positives = 395/552 (71%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN-NVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGM V   LK  K  N++AVIGDG
Sbjct: 89  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMTVASALKAEKRRNIIAVIGDG 148

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 149 AMSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAHLARLVSRPA 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K  +K++     + A + +E+ARG + G   TLF+ELG YY+GP+DGHN+  
Sbjct: 200 YRSLRERIKMFSKKMPKFFLDKARRSEEFARGFLVGG--TLFDELGFYYVGPIDGHNLKH 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV  FD  TGKQ K+     
Sbjct: 258 LLPVLKNVREYPN-GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQIKTQGNAL 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F++ALI EA  D  +V I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 317 AYTKVFSKALIEEATHDNKIVGITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 377 MACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 437 LATLPEFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGVGMDLP--QRGELLEIGK 494

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG RVAL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA  HE
Sbjct: 495 GRVLREGSRVALVCFGTRMSEVLVAADALIAEGLSTTVADARFAKPLDKDLMRRLACEHE 554

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+ VEEG+IGGFG+H++QFLA++GLL+  +K R L  PD Y++HGSP   L++ GL   
Sbjct: 555 VLVAVEEGAIGGFGAHLLQFLAKEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSRIGLDAV 614

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 615 GIVNTVFTALGR 626


>gi|418936010|ref|ZP_13489753.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
 gi|375057273|gb|EHS53454.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. PDO1-076]
          Length = 639

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 320/553 (57%), Positives = 395/553 (71%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVAADLSQTDRKVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R++ K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ + L
Sbjct: 205 MGIRDIGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNQQ-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F +AL+ EA +D+ +V I AAM  GTGL+     FPTR FDVGIAEQHAVTFAAGL
Sbjct: 322 YTAVFGDALVQEATLDEKIVGITAAMPSGTGLDKLQELFPTRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG +PFCA+YS+F+QR YDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 ASEGFRPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAA+ DD P  FRYPRG G+GV LP   +G  LE+GKG
Sbjct: 442 ASLPGFVVMAAADEAELKHMVRTAASYDDGPISFRYPRGEGVGVALP--ERGEILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLD  +IR LA+ H V
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDVDMIRRLAREHAV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG++GGFGS VV  L  +GLLDG +K R LVLPD ++D   P    A+AGL  + 
Sbjct: 560 LVTVEEGAVGGFGSQVVHLLVNEGLLDGGLKMRSLVLPDYWMDQAKPEVMYAKAGLDAAG 619

Query: 541 IAATVFNILGQTR 553
           I  TVF  LG+T+
Sbjct: 620 ILQTVFAALGETQ 632


>gi|67906635|gb|AAY82730.1| predicted 1-deoxy-d-xylulose-5-phosphate synthase [uncultured
           bacterium eBACmed86H08]
          Length = 635

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 302/549 (55%), Positives = 392/549 (71%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSESEYD FG  HSSTSISA LG+A    L  +  NVVAVIGDGA
Sbjct: 91  IKTLRQGDGLSGFTKRSESEYDPFGAAHSSTSISAALGIATANKLSKKSENVVAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG   + MIVILNDN  +S+          PVGA+ S L++L + +  
Sbjct: 151 ISAGMAYEAMNNAGTSKTKMIVILNDN-DMSIA--------EPVGAMRSYLAKLLTGKIY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K +         + A K +++ R  ++G   TLF  LG YY+GP+DGH++D L
Sbjct: 202 FSLRETFKLIISAFSKRFSKKAGKAEDFLRSAVTGG--TLFNSLGFYYVGPIDGHDIDTL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V++L+  K+T   GP++IHV TEKG+GY +AE + DKYHGV+KF+  TG Q KSS++  S
Sbjct: 260 VSVLKNAKDTNFEGPIMIHVKTEKGKGYQFAENSKDKYHGVSKFNVQTGVQEKSSSKIPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA  LI  AE D  ++ I AAM  GTG++LF ++FP R FDVGIAEQHAVTF+AGL
Sbjct: 320 YTSVFANTLIKHAERDSKIIGITAAMPSGTGMDLFAKKFPNRMFDVGIAEQHAVTFSAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADGPTH GSFD+T++
Sbjct: 380 ATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDITYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN VVMAPSDE+EL  M+ T+  I+D+PS FRYPRG GIG++LP  N+ I  E+GKG
Sbjct: 440 STLPNFVVMAPSDESELVKMINTSVDINDKPSAFRYPRGTGIGIKLPEINEKI--EIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+ +AL+ +G  +Q C  A   LE  GL LT+ DARFCKPLD  L+ + AK+HEV
Sbjct: 498 RVIKEGKEIALINFGARLQECQKALNNLEKKGLNLTLIDARFCKPLDENLMWNTAKNHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +I++EEGSIGGFGSH+ +FL++ GLL+  +K+R +  PD++ID   P      AGL    
Sbjct: 558 VISIEEGSIGGFGSHLSKFLSEKGLLE-KIKFRSMTFPDKFIDQDKPDLMYQIAGLDSKA 616

Query: 541 IAATVFNIL 549
           I   V+ +L
Sbjct: 617 IEEKVYEVL 625


>gi|114569400|ref|YP_756080.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
 gi|122316501|sp|Q0ARE5.1|DXS_MARMM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114339862|gb|ABI65142.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maricaulis maris MCS10]
          Length = 643

 Score =  623 bits (1607), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 322/551 (58%), Positives = 394/551 (71%), Gaps = 16/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  H+STSISA LG AVGRDLK    NV+AVIGDG+
Sbjct: 94  IRTLRQPGGLSGFTKRSESEYDPFGAAHASTSISAALGFAVGRDLKDENRNVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG++   +IVILNDN  +S+         PPVGA+S   +RL S++  
Sbjct: 154 MSAGMAYEAMNNAGHIGGRLIVILNDN-DMSIA--------PPVGAMSHYFARLVSSQRY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +R++ KGV K +   + E A + +EY RGM    G TLFEE+G  Y+GP+DGH++D L
Sbjct: 205 RSIRKLGKGVAKAL--RVEEAARRAEEYMRGM--AMGGTLFEEMGFRYVGPIDGHDLDQL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V++    GPVLIHVVT+KG+GY  AE + DKYHGVAKF+  TG+Q KS A   S
Sbjct: 261 VPVLRNVRDGDN-GPVLIHVVTQKGKGYAPAEASDDKYHGVAKFNVITGEQQKSKAAAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ LI EAE D  VV + AAM GGTGL+LF  RFP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFAQQLIREAEADSRVVGVTAAMPGGTGLDLFGERFPDRMFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPF AIYS+F+QR YDQVVHDV +QKLPVRFA+DRAGLVGADG TH GSFD+ ++
Sbjct: 380 AADGMKPFAAIYSTFLQRGYDQVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDIGYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP MV+MA +DE EL  MV TAA IDD PS FRYPRGNG G+E+P  ++  PLE+GKG
Sbjct: 440 GALPGMVLMAAADELELSRMVKTAALIDDGPSAFRYPRGNGTGIEIP--DQIEPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG R+A+L  GT ++  L A+  L + G   TVADARF KPLD  LI  LA+ HEV
Sbjct: 498 RIVREGSRIAILSLGTRLEESLKAADALAAQGFSTTVADARFAKPLDEDLILRLAREHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFG+ V+  LA  G LD  ++ R L LPD + D  +P D    AGL   H
Sbjct: 558 LITVEEGAVGGFGAFVLHMLADKGALDRGLRIRTLTLPDVFQDQEAPFDMYETAGLNARH 617

Query: 541 IAATVFNILGQ 551
           IAA     +G+
Sbjct: 618 IAAKALEAMGK 628


>gi|190890626|ref|YP_001977168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium etli CIAT 652]
 gi|229836075|sp|B3PS68.1|DXS_RHIE6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|190695905|gb|ACE89990.1| 1-deoxy-D-xylulose-5-phosphate synthase protein [Rhizobium etli
           CIAT 652]
          Length = 638

 Score =  623 bits (1606), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 319/551 (57%), Positives = 395/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKNDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDN-ARGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 ATLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  LE+ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLEAAGLSTTVADARFAKPLDHDLIRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGS V+Q+L+ +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 LITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFRALGR 630


>gi|241203354|ref|YP_002974450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240857244|gb|ACS54911.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 638

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/551 (57%), Positives = 394/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKSDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDNGR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     +P+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEAALDDKIVGITAAMPNGTGLDKLAEAYPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMP--VRGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEI 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV+ FLA +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 VITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFKALGR 630


>gi|451941627|ref|YP_007462264.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
 gi|451901014|gb|AGF75476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
          Length = 638

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/552 (57%), Positives = 399/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   K N++ VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVVSALKAEEKRNIITVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG L++ +IV+LNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALNARLIVVLNDN-DMSIA--------PPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K + +++     + A   +E+ARG + G   TLFEELG YY+GP+DGHN+  
Sbjct: 204 YRSLRERIKVLGEKLPKFFLDKARLSEEFARGFLVGG--TLFEELGFYYVGPIDGHNLKH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TGKQ K+ +   
Sbjct: 262 LLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDIVTGKQVKAQSNVL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  +V+I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEATHDDKIVSITAAMPTGTGLDAFAEKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LTTLPEFVVMAPSDEIELMHMVRTAAAYDQGPLSFRYPRGEGVGMDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG R+AL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLREGNRIALVCFGTRMSEVLRAADALVAEGLSTTVADARFAKPLDKDLMRCLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           +L+T+EEG+IGGFG+H++QFLAQ+GLL+  +K R L LPD Y++HGSP   L++ GL   
Sbjct: 559 ILVTIEEGAIGGFGAHLLQFLAQEGLLEYGLKVRTLKLPDEYLNHGSPEKVLSRVGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIVNTVFTALGR 630


>gi|402490059|ref|ZP_10836850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
 gi|401811003|gb|EJT03374.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. CCGE 510]
          Length = 638

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 318/551 (57%), Positives = 396/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      VVAVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKSDRRVVAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R++ K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDLGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDNGR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLADAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +G+ +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIIKEGTKVALLSFGSRLADCLLAAEDLDAAGLSTTVADARFAKPLDHELIRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGS V+Q+L+ +GLLD  +K R LV+PD +++   P   +A AGL  + 
Sbjct: 560 VITVEEGSIGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMIAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IISTVFKALGR 630


>gi|426401571|ref|YP_007020543.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
           patella L2]
 gi|425858239|gb|AFX99275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Endolissoclinum
           patella L2]
          Length = 637

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 318/549 (57%), Positives = 394/549 (71%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES+YD FG GHSSTSIS+GLGM   RDL G+  +VV+VIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESKYDSFGAGHSSTSISSGLGMIAARDLLGKDFDVVSVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG   S ++VILNDNK +S+          PVGA+S+ LSR+ S+R  
Sbjct: 154 MSAGMAYEAINNAGASASSILVILNDNK-MSISQ--------PVGAMSAYLSRIVSSRSF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             L E+ K +T+     +  +  +  ++AR ++ G+  TLFE++G +YIGPVDGHN+D L
Sbjct: 205 SSLHELKKQLTQHFPRSLDLVTRQAKKFARDILRGN--TLFEKMGFFYIGPVDGHNIDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+++K +K  GPVL+H+VTEKGRG+P+A+  A+KYH VAKF+P TGKQ K      S
Sbjct: 263 VLILKKLKGSKH-GPVLLHIVTEKGRGHPFAKNNAEKYHAVAKFNPITGKQVKPKLNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI  AEVD  +VAI AAM  GTGLN F  RFP R FDVGIAEQHAVTFAAG+
Sbjct: 322 YTNVFAESLIQAAEVDDRIVAITAAMPSGTGLNKFAERFPKRSFDVGIAEQHAVTFAAGM 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KPF AIYS+F+QR YDQVVHDV L  LPVRFA+DRAGLVGADGP H G+FD+T++
Sbjct: 382 ACEGMKPFAAIYSTFLQRGYDQVVHDVMLHDLPVRFAIDRAGLVGADGPPHAGAFDLTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN ++MAPSDEAEL HM+ TA AIDD PS  RYPRG  +GVELP    G  L++GKG
Sbjct: 442 GCLPNFIIMAPSDEAELKHMITTAVAIDDGPSAVRYPRGESVGVELP--EIGSVLQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L  GT +Q  ++A+  L++ G+  TVADARF KP+D  L+  LAK H V
Sbjct: 500 RIIREGTTVAILSLGTRLQEVVSAADALQARGISTTVADARFAKPIDGELVSRLAKEHAV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEE +IGGF + V+  LAQ  LLD  +  R +VLPDR IDH S   Q   AGL    
Sbjct: 560 LITVEENAIGGFATQVLHHLAQARLLDIGLVIRLMVLPDRTIDHDSQIAQYKDAGLDAES 619

Query: 541 IAATVFNIL 549
           I  T    L
Sbjct: 620 ILNTALYAL 628


>gi|424888383|ref|ZP_18311986.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2012]
 gi|393173932|gb|EJC73976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2012]
          Length = 638

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 318/551 (57%), Positives = 394/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKSDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDNGR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDGGPISFRYPRGEGVGVDMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFGS V+Q+L+ +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 LITVEEGSVGGFGSQVLQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFKALGR 630


>gi|300022017|ref|YP_003754628.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299523838|gb|ADJ22307.1| deoxyxylulose-5-phosphate synthase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 648

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 320/549 (58%), Positives = 400/549 (72%), Gaps = 13/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFTKR+ESE+D FG  HSSTSISAGLGMAV RD+ G   NVV VIGDGA
Sbjct: 98  IRTLRQPNGLSGFTKRTESEFDPFGAAHSSTSISAGLGMAVARDMSGGDTNVVCVIGDGA 157

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG  +  +IVILNDN  +S+         PP GALSS L+R  S+   
Sbjct: 158 MSAGMAYEALNNAGARNERLIVILNDN-DMSIA--------PPTGALSSYLARTTSSASY 208

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ AK + +++       AA+V+EY R +  G G+  FEELG +Y+GP+DGH++  L
Sbjct: 209 FAVRDFAKQLAQRLPKSWERRAARVEEYTRSLWQGGGA-WFEELGFHYVGPIDGHDLGQL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L+ V++ K  GP+L+HV+T+KG+GY  AE + DKYHGVAKF+  TG Q K  A   S
Sbjct: 268 VPVLKNVRDAKQ-GPILVHVMTKKGKGYAPAEASPDKYHGVAKFNVVTGVQAKPQAAAPS 326

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LIAEA+ D  +VAI AAM  GTGL++F R FP R FDVGIAEQHAVTFAAGL
Sbjct: 327 YTRVFADSLIAEAKKDPKIVAITAAMPDGTGLDVFGREFPDRTFDVGIAEQHAVTFAAGL 386

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF AIYS+F+QR YDQVVHDV +Q LPVRFA+DRAG VGADG TH GSFD+ ++
Sbjct: 387 ATEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGFVGADGATHAGSFDLAYL 446

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN V+MA +DEAEL HMVATAA+IDDRPS FRYPRG G GV++P   + +P  +GKG
Sbjct: 447 GCLPNFVIMAAADEAELKHMVATAASIDDRPSAFRYPRGEGTGVQMPEVGEVLP--IGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG  VALL  GT +   L A+  L + GL  TVADARF KPLD  LIR LA++HEV
Sbjct: 505 RILREGSTVALLSLGTRLGEALKAADQLAALGLSTTVADARFMKPLDTDLIRQLAQNHEV 564

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGSIGGFGSHV+Q+L+ +GLLD  +K R  V+PD ++D   P     +AGL+ S 
Sbjct: 565 LVTIEEGSIGGFGSHVLQYLSDNGLLDHGLKVRSKVMPDCFVDQDKPEVMCQKAGLSASG 624

Query: 541 IAATVFNIL 549
           I  TV + L
Sbjct: 625 IVETVRSAL 633


>gi|408378647|ref|ZP_11176244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
 gi|407747784|gb|EKF59303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
          Length = 639

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 393/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVAAELSKTDRKVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRSY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE+ K +T  +G  +     +  E+ARG ++G   T+FEELG Y+IGP+DGH+ + L
Sbjct: 205 MGFRELGKKLTAYLGKTVDRAITRAVEHARGYVTGG--TMFEELGFYHIGPIDGHSFEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     +
Sbjct: 263 LPVLRNVRDN-AKGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGTQAKAKPNAPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+ EA  D+ +V I AAM  GTGL+     FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTAVFADALVEEARHDEKIVGITAAMPNGTGLDKLQTLFPERTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QR YDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGFKPFCALYSTFLQRGYDQVVHDVGIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GV +P   +G  LE+G+G
Sbjct: 442 AALPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVPMP--ERGEILEIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ H+V
Sbjct: 500 RIVKQGSKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHQV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEG++GGFGSHV+ FL  +GLLD  +K R LVLPD ++D   P    A+AGL  S 
Sbjct: 560 VVTVEEGAVGGFGSHVMHFLVNEGLLDNGLKVRSLVLPDVWMDQAKPEVMYARAGLDASG 619

Query: 541 IAATVFNILGQ 551
           I  TVF  LGQ
Sbjct: 620 ILKTVFAALGQ 630


>gi|395792084|ref|ZP_10471523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis Pm136co]
 gi|423714132|ref|ZP_17688391.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395421279|gb|EJF87535.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395433003|gb|EJF98977.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella vinsonii subsp.
           arupensis Pm136co]
          Length = 640

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 319/552 (57%), Positives = 398/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LK   K N++AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKAEEKRNIIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG L++ +IV+LNDN  +S+         PP GA+S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALNARLIVVLNDN-DMSIA--------PPTGAMSAHLARLVSRPA 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K + +++     + A   +E+ARG + G   TLFEELG YY+GP+DGHN+  
Sbjct: 204 YRSLRERIKVLGEKLPKFFLDKARLSEEFARGFLVGG--TLFEELGFYYVGPIDGHNLKH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +F+  TG+Q K+ +   
Sbjct: 262 LLPVLKNVREYPH-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFNIITGQQVKAQSSVL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +V I AAM  GTGL+ F ++FP R FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEASHDDKIVGITAAMPTGTGLDAFAKKFPERMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LTTLPEFVVMAPSDEVELMHMVRTAAAYDQGPLSFRYPRGEGVGMDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG R+AL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLCEGNRIALVCFGTRMSEVLVAAEELLAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QFLAQ+GLLD  +K R L LPD Y+ HGSP   L++ GL   
Sbjct: 559 VLVTIEEGAIGGFGAHLLQFLAQEGLLDHGLKVRTLKLPDEYLSHGSPEKVLSRVGLDAV 618

Query: 540 HIAATVFNILGQ 551
            I  TVF  LG+
Sbjct: 619 GIINTVFTALGR 630


>gi|319406941|emb|CBI80578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. 1-1C]
          Length = 640

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 318/552 (57%), Positives = 398/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMA+   L+   K N+++VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAMVSALEAEEKRNIISVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           A++AG AYEAMNNAG LD+ +IVILNDN              PP GA+S+ L+RL S   
Sbjct: 153 AISAGMAYEAMNNAGALDARLIVILNDNDM---------SIAPPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K ++K++     E A   +E+AR   +G   TLF+ELG YY+GP+DGHN   
Sbjct: 204 YRSLRERVKILSKKLPKFFLEKARYSEEFARSFFAGG--TLFDELGFYYVGPIDGHNFGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GYP AE ++DKYHGV +FD  TGKQ K+ + + 
Sbjct: 262 LLPVLKNVRECPD-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVITGKQVKAQSSSL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA+ D  +V I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSQALIEEAKHDNKIVGITAAMPNGTGLDSFSEKFPKRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ+VHDV LQKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIVHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP+ VVMAPSDE EL HMV TAAA +  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LATLPDFVVMAPSDEVELMHMVRTAAAYNQGPISFRYPRGQGVGMDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG ++AL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRLLCEGSKIALVCFGTRLSEVLVAADELVAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EEG+IGGFG+H++QF AQ+GLL+  +K R L  PD Y++HG P   L+Q GL  +
Sbjct: 559 VLITIEEGAIGGFGAHLLQFFAQEGLLEHGLKVRTLKFPDEYLNHGLPDKVLSQIGLDAT 618

Query: 540 HIAATVFNILGQ 551
            I   VF+ LG+
Sbjct: 619 GIINAVFSALGR 630


>gi|163867874|ref|YP_001609078.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
           105476]
 gi|189027767|sp|A9IQP2.1|DXS_BART1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|161017525|emb|CAK01083.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella tribocorum CIP
           105476]
          Length = 635

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 318/552 (57%), Positives = 401/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG-RKNNVVAVIGDG 59
           + T+RQ  GLSGFTKR ES YD FG GHSSTSISAGLGMAV   LK  +K  V+AVIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRVESVYDPFGAGHSSTSISAGLGMAVASALKEEKKRKVIAVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG L++ +IVILNDN  +S+         PP G++S+ L+RL S   
Sbjct: 153 AMSAGMAYEAMNNAGALNARLIVILNDN-DMSIA--------PPTGSMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K +++++     + A + +E+ARG++ G   TLF+ELG YY+GP+DGHN+  
Sbjct: 204 YRHLRERVKMLSEKLPKFFWDKARRSEEFARGLLVGG--TLFDELGFYYVGPIDGHNLGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GYP AE ++DKYHGV +FD  TGKQ K+S+   
Sbjct: 262 LLPVLKNVREYPH-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGKQVKASSNIL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++AL+ EA  D  +V I AAM  GTGL+ F  +FP + FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALVEEACHDDKIVGITAAMPTGTGLDSFAEKFPEKMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KPF AIYS+F+QRAYDQ++HDV +QKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 LACEGYKPFVAIYSTFLQRAYDQIIHDVSIQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP  VVMAPSDE EL HMV TAAA D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LATLPEFVVMAPSDELELMHMVRTAAAYDQGPISFRYPRGEGIGIDLP--QRGEILEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG R+AL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLREGNRIALVCFGTRMSEVLRAADRLGAKGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QFLAQ+GLL+  +K R L  PD Y++HGSP   L+  GL   
Sbjct: 559 VLVTIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSPEKVLSTIGLDAM 618

Query: 540 HIAATVFNILGQ 551
            I  TV  ++G+
Sbjct: 619 GIVNTVLTVVGR 630


>gi|359408195|ref|ZP_09200667.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
           proteobacterium HIMB100]
 gi|356676952|gb|EHI49301.1| 1-deoxy-D-xylulose-5-phosphate synthase [SAR116 cluster alpha
           proteobacterium HIMB100]
          Length = 640

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 311/555 (56%), Positives = 399/555 (71%), Gaps = 15/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  GLSGFTKRSES+YD FG GHSSTSISAGLGMAV RDL+G  NNV+AVIGDGA
Sbjct: 93  MSGLRQEGGLSGFTKRSESDYDPFGAGHSSTSISAGLGMAVARDLQGGHNNVIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG +DS+++VILNDN              PPVGA+S+ LS + S+RP 
Sbjct: 153 MSAGMAFEALNNAGAMDSNLLVILNDNDM---------SIAPPVGAMSAYLSEMISSRPY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + +R++ K V  +    + + A +  + AR ++SG   +LF ELG ++IGP+DGH+ D L
Sbjct: 204 QSIRDLVKEVASRFPAEIEKTARRAKDLARDLVSGH--SLFSELGFFHIGPIDGHDFDHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  +K+ +  GPVL+HVVTEKG+G+P+A  +++KYH V KFD  TG+Q KSSA + +
Sbjct: 262 LPVLRNLKDGQIGGPVLVHVVTEKGKGHPFAGPSSEKYHAVPKFDVVTGQQSKSSANSPT 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ L A AE D+ +VAI AAM  GTGLN  +   P+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTQVFADTLSALAEEDEKIVAITAAMPSGTGLNQMMTTCPSRVFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF AIYS+F+QR YDQ+VHDV +Q LPVRFA+DRAG+VGADG TH G FD+ ++
Sbjct: 382 ATEGMKPFAAIYSTFLQRGYDQLVHDVAIQNLPVRFAIDRAGVVGADGATHAGVFDLAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMV+M PSDEAEL HM ATAA+ DD PS  RYPRG G G ELP   +  PLE+GKG
Sbjct: 442 ACLPNMVIMCPSDEAELAHMTATAASYDDGPSAVRYPRGTGTGAELPQTPE--PLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L +GE +A+L  GT  Q+C   +  LE +G+ +T+ADARF KP D  L+R LA +H+ 
Sbjct: 500 RLLQQGEELAILSLGTMAQTCSEVARRLEQDGISVTLADARFAKPFDADLLRQLATTHDA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEE S GGF +H++QF+A +GLLD  +K R   LPD YIDH   A QLA AGL    
Sbjct: 560 LMVVEESSPGGFSAHLLQFMATEGLLDTGLKIRVASLPDAYIDHADRARQLAGAGLDADS 619

Query: 541 IAATVFNIL--GQTR 553
           +      I+  GQ+R
Sbjct: 620 LYQLASQIVTAGQSR 634


>gi|424915247|ref|ZP_18338611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM597]
 gi|392851423|gb|EJB03944.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM597]
          Length = 638

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 316/551 (57%), Positives = 394/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKNDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRD-NARGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEGS+GGFGS V+Q+L+ +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 VITIEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFRALGR 630


>gi|15888088|ref|NP_353769.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
           C58]
 gi|22095590|sp|Q8UHD7.1|DXS_AGRT5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|15155716|gb|AAK86554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium fabrum str.
           C58]
          Length = 639

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 321/551 (58%), Positives = 398/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L G    V+AVIGDG+
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDGSDRKVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D+ ++ + AAM  GTGL+     FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  L++GKG
Sbjct: 442 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 500 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 560 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 620 IVSTVFNALGQ 630


>gi|451940393|ref|YP_007461031.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
           Aust/NH1]
 gi|451899780|gb|AGF74243.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella australis
           Aust/NH1]
          Length = 635

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 314/552 (56%), Positives = 401/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMAV   LKG  + N+++VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAVASALKGEGRRNIISVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AM+AG AYEAMNNAG L++ +IVILNDN  +S+         PP GA+S+ L+ L S   
Sbjct: 153 AMSAGMAYEAMNNAGALNARLIVILNDN-DMSIA--------PPTGAMSAYLACLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R  RE  K + K++     E A + +E ARG + G   TLF+ LG YY+GP+DGHN+  
Sbjct: 204 YRHFRERVKILNKKLPKFFSEKARRSEELARGFLVGG--TLFDALGFYYVGPIDGHNLGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+H+VT KG+GY  AE ++ +YHGV++FD  TGKQ K+ +   
Sbjct: 262 LLPVLKNVREYPN-GPVLVHIVTHKGKGYAPAEASSHRYHGVSRFDVITGKQIKARSNCL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F++ALI EA  D  +VA+ AAM  GTGL++F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 PYTKVFSKALIEEASYDDKIVAVTAAMPTGTGLDVFAEKFPGRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QR+YDQ++HDV +QKLPVRFA+DRAG VGADGPTH GSFD+ F
Sbjct: 381 VACEGYKPFVAIYSTFLQRSYDQIIHDVSIQKLPVRFAIDRAGFVGADGPTHAGSFDIIF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP+ +VMAPSDE EL HMV TAA  D  P  FRYPRG G G+ LP   +G  LE+GK
Sbjct: 441 LAALPDFIVMAPSDEVELMHMVRTAADYDQGPISFRYPRGEGTGIVLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG RVAL+ +GT +   L+A+  LE+ GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLCEGSRVALVCFGTRLSEVLSAAEELEAEGLSTTVADARFAKPLDKNLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+H++QFLAQ+GLL+  +K R L  PD+Y++HGSP   L+  GL  +
Sbjct: 559 VLVTIEEGAVGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDKYLNHGSPEKVLSLIGLDAA 618

Query: 540 HIAATVFNILGQ 551
            I  TVF+ LG+
Sbjct: 619 GIIKTVFSALGR 630


>gi|222634935|gb|EEE65067.1| hypothetical protein OsJ_20090 [Oryza sativa Japonica Group]
          Length = 638

 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 305/530 (57%), Positives = 382/530 (72%), Gaps = 23/530 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT++Q  GLSGFT R ESEYD FG GH   S+SAGLGMAV RDL GRKN +V VI +  
Sbjct: 53  FHTIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWT 112

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM +AG+LDS+M+VILND++   LP A     +  + ALSSALS++QS++  
Sbjct: 113 TMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGF 171

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKG++K  G  MHE AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL
Sbjct: 172 RKFREAAKGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDL 231

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRG---------YPYAEKAADKYHGVAKFDPATGKQ 231
           + +L+EV    +TGPVL+HV+TE  +           P  E   D    + KF       
Sbjct: 232 ICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDILKF------- 284

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
              +  +++Y   F E+LIAEAE DK +V +H  MG    + LF  RFP R FD+GIAEQ
Sbjct: 285 -LENGLSRTYNDCFVESLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQ 343

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTF+AGLAC GLKPFC I S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+
Sbjct: 344 HAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTN 403

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPG 409
            G FD+TFM+CLPNM+VM+PS+E EL  MVATAA ++DRP CFRYP+G  +G    L  G
Sbjct: 404 SGPFDITFMSCLPNMIVMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYG 463

Query: 410 NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHA 469
           N   PLE+GKG IL EG+ +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  
Sbjct: 464 N---PLEIGKGEILAEGKEIAFLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDID 520

Query: 470 LIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPD 519
           LIR L + H+ LITVEEG++GGFGSHV QF++ DGLLDG +KWRP+VLPD
Sbjct: 521 LIRMLCQQHDFLITVEEGTVGGFGSHVSQFISLDGLLDGKIKWRPIVLPD 570


>gi|319405367|emb|CBI78984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella sp. AR 15-3]
          Length = 640

 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 315/552 (57%), Positives = 400/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMA+   L+   + N+++VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAIVSALEAEERRNIISVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           A++AG AYEAMNNAG LD+ +IVILNDN  +S+ +        P GA+S+ L+RL S   
Sbjct: 153 AISAGMAYEAMNNAGALDARLIVILNDN-DMSIAS--------PTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  K ++K++     E A   +E+AR    G   TLF+ELG YY+GP+DGHN   
Sbjct: 204 YRNLRERIKILSKKLPKFFLEKARYSEEFARSFFVGG--TLFDELGFYYVGPIDGHNFGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GYP AE ++DKYHGV +FD  TGKQ K+ + + 
Sbjct: 262 LLPVLKNVRECPN-GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVITGKQVKAQSNSL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA+ D  ++ I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSQALIEEAQHDNKIIGITAAMPNGTGLDFFSEKFPKRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ++HDV LQKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIIHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP+ VVMAPSDE EL HMV TAAA D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LTTLPDFVVMAPSDELELMHMVRTAAAYDQGPISFRYPRGEGIGMDLP--QRGEVLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG ++AL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLCEGSKIALVCFGTRLSEVLIAADELVAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG++GGFG+H++QFLAQ+GLL+  +K R L  PD Y++HGS     +Q GL  +
Sbjct: 559 VLVTIEEGAVGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGSLNKVFSQIGLDAT 618

Query: 540 HIAATVFNILGQ 551
            I  TVF+ LG+
Sbjct: 619 GIINTVFSALGR 630


>gi|335032694|ref|ZP_08526069.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
           31749]
 gi|333795869|gb|EGL67191.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium sp. ATCC
           31749]
          Length = 636

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 321/551 (58%), Positives = 397/551 (72%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L G    V+AVIGDG+
Sbjct: 91  IRTLRQEDGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDGSDRKVIAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 151 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 202 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 260 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D+ ++ + AAM  GTGL+     FP R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 379 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  L++GKG
Sbjct: 439 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 497 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 557 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAG 616

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 617 IVSTVFNALGQ 627


>gi|319403927|emb|CBI77515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 640

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 319/552 (57%), Positives = 400/552 (72%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMA+   L+   K N+++VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAMVSALEAEEKRNIISVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           A++AG AYEAMNNAG LD+ +IVILNDN  +S+ +        P GA+S+ L+RL S   
Sbjct: 153 AISAGMAYEAMNNAGALDARLIVILNDN-DMSIAS--------PTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LRE  + ++K++     E A   +E+AR   +G   TLF+ELG YY+GP+DGHN   
Sbjct: 204 YRSLRERVRILSKKLPKFFSEKARYSEEFARSFFAGG--TLFDELGFYYVGPIDGHNFGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GYP AE ++DKYHGV  FD  TGKQ K+ + + 
Sbjct: 262 LLPVLKNVRECPD-GPVLVHVVTHKGKGYPPAEASSDKYHGVNCFDVITGKQVKAQSSSL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  +V I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSQALIEEATHDNKIVGITAAMPNGTGLDSFSEKFPKRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KPF AIYS+F+QRAYDQ+VHDV LQKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IACEGYKPFVAIYSTFLQRAYDQIVHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP+ VVMAPSDE EL HMV TAAA D  P  FRYPRG G+G++LP   +G  LE+GK
Sbjct: 441 LATLPDFVVMAPSDEVELMHMVRTAAAYDQGPISFRYPRGQGVGMDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG ++AL+ +GT +   L A+  L + GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRLLCEGSKIALVCFGTRLSEVLVAADELVAEGLSTTVADARFAKPLDKDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VLIT+EEG+IGGFG+H++QFLAQ+GLL+  +K R L  PD Y++HG P   L+Q GL  +
Sbjct: 559 VLITIEEGAIGGFGAHLLQFLAQEGLLEHGLKVRTLKFPDEYLNHGLPDKVLSQIGLDAT 618

Query: 540 HIAATVFNILGQ 551
            I   VF+ LG+
Sbjct: 619 GIINAVFSALGR 630


>gi|159046066|ref|YP_001534860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
 gi|157913826|gb|ABV95259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
          Length = 658

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 321/560 (57%), Positives = 398/560 (71%), Gaps = 19/560 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG A  RDL G   + +AVIGDG+
Sbjct: 111 IRTLRQKGGLSGFTKRSESIYDPFGAAHSSTSISAALGFATARDLGGPTGDAIAVIGDGS 170

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG     + VILNDN ++S+         PP GA+S+ LS L S+ PL
Sbjct: 171 ISAGMAYEAMNNAGSEKRRLFVILNDN-EMSI--------APPTGAMSTYLSDLASSGPL 221

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISG---SGSTLFEELGLYYIGPVDGHNV 177
             L+E+A+GV + + GP+ E A +    AR +++G   S +TLFEELG  YIGP+DGH++
Sbjct: 222 YALKELAEGVERSLPGPLREGAQR----ARNLVTGEHGSSATLFEELGFDYIGPIDGHDI 277

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ +L   +  K +GPVLIH  T KG+GY  AE + D YHGVAKFD ATGKQ KS+  
Sbjct: 278 PQLLQVLRAAR-AKASGPVLIHACTVKGKGYSPAELSDDCYHGVAKFDVATGKQQKSAPN 336

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             +YT  F   L AEAE D  + A+ AAM GGTG+N+  +RFP R FDVGIAEQHAVTFA
Sbjct: 337 APAYTKVFGATLTAEAERDSRICAVTAAMPGGTGVNIMGKRFPGRVFDVGIAEQHAVTFA 396

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA  G+KPFCAIYSSF+QR YDQVVHDV LQKLPVRFA+DRAGLVGADGPTH G++D+
Sbjct: 397 AGLAAGGMKPFCAIYSSFLQRGYDQVVHDVALQKLPVRFAIDRAGLVGADGPTHAGAYDI 456

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            +++ LPNM VMA +DEAEL HMVATAAA DD P  FRYPRG G+G+E+P   +G  LE+
Sbjct: 457 AYLSNLPNMTVMAAADEAELVHMVATAAAYDDGPIAFRYPRGEGVGIEMP--ERGSLLEI 514

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKGRI+ EG  VA+L  G  +  CL A+  LE+ G+ +T+ADARF KPLD  LI  L  +
Sbjct: 515 GKGRIIREGGSVAILSLGAHLSECLKAAEDLEARGIGVTIADARFAKPLDTDLIAQLTAN 574

Query: 478 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           HE LITVE+G+ GGFG+ V+ +LA+ G LDGT+K R + LPDR+ID  SPAD    AGLT
Sbjct: 575 HEALITVEQGAEGGFGAMVLHWLARTGRLDGTLKIRTMTLPDRFIDQASPADMYHDAGLT 634

Query: 538 PSHIAATVFNILGQTREALE 557
             HIA  V +++G     LE
Sbjct: 635 ARHIAGQVLHLMGAETALLE 654


>gi|424898574|ref|ZP_18322148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2297]
 gi|393182801|gb|EJC82840.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2297]
          Length = 638

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 316/551 (57%), Positives = 394/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKNDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRDNGR-GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L++G+G
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDGGPISFRYPRGEGVGVDMPV--RGEILQIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR LA+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGS+GGFGS V+Q+L+ +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 VITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFRALGR 630


>gi|84500606|ref|ZP_00998855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
           HTCC2597]
 gi|84391559|gb|EAQ03891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola batsensis
           HTCC2597]
          Length = 642

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 317/553 (57%), Positives = 394/553 (71%), Gaps = 18/553 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+RQ DGLSGFTKRSES YDCFG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAALGFAVARDLGGAPEHGIGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG L   +IVILNDN  +S+         PPVGA S+ LSRL +
Sbjct: 154 GDGAMSAGMAFEAMNNAGSLGKRLIVILNDN-DMSI--------APPVGAFSNYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG+   +  P  E A +  +  +GM    G TLFEELG  YIGP+DGH+
Sbjct: 205 EEPFQELKAAAKGMASLLPPPFQEGAKRAKDMLKGM--AMGGTLFEELGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ IL  VK  +  GPVL+HVVT+KG+GY  AE+A+DK H  AKFD  +G+Q K+ +
Sbjct: 263 MSQLLPILRTVK-ARAAGPVLVHVVTKKGKGYGPAERASDKGHATAKFDVISGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L+  A  D+ V A+ AAM  GTGLNL   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFGKELVRLAGEDQRVCAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA  G++PFCAIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAGLAAGGMRPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V+++  LP  VVMA +DEAEL HMVATAAA D+ P  FRYPRG G GV++P  +KG+PLE
Sbjct: 442 VSYLTNLPGFVVMAAADEAELMHMVATAAAHDEGPIAFRYPRGEGAGVDMP--DKGVPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ +G RVA+L YGT ++  L A   LE+ G+R TVADARF KPLD  L+ +LA 
Sbjct: 500 IGKGRMIRDGSRVAILSYGTRLKEVLDACEALEARGIRPTVADARFAKPLDRDLVLNLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA +G+ D  +++R +VLPD +ID  SPAD  A AGL
Sbjct: 560 DHEALITIEEGAVGGFGSHVAQLLANEGVFDDGLRFRSMVLPDTFIDQASPADMYATAGL 619

Query: 537 TPSHIAATVFNIL 549
               I A V  +L
Sbjct: 620 NAPDIEAKVLEVL 632


>gi|209548170|ref|YP_002280087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|226801561|sp|B5ZS68.1|DXS_RHILW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|209533926|gb|ACI53861.1| deoxyxylulose-5-phosphate synthase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 638

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 316/551 (57%), Positives = 392/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISAGLGMA+  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEDGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAIAADLDKNDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GYP AE AADKYHGV KFD  TG Q +      S
Sbjct: 263 LPVLRNVRD-NARGPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQARVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEAL+ EA +D  +V I AAM  GTGL+     FP+RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALVQEATLDDKIVGITAAMPNGTGLDKLAEAFPSRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  VVMA +DEAEL HMV TA A D  P  FRYPRG G+GV++P   +G  L +GKG
Sbjct: 442 TTLPGFVVMAAADEAELKHMVRTAVAYDAGPISFRYPRGEGVGVDMPV--RGEILRIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLDH LIR  A+ HE+
Sbjct: 500 RIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQFARHHEM 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGS+GGFGS V+Q+L+ +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 VITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVF  LG+
Sbjct: 620 IVSTVFRALGR 630


>gi|372281821|ref|ZP_09517857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola sp. S124]
          Length = 641

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 322/557 (57%), Positives = 393/557 (70%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG AV RDL G+      + +AVI
Sbjct: 94  IRTLRQKGGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGQLPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L   MIVILNDN ++S+         PPVGALS+ LSRL +
Sbjct: 154 GDGAMSAGMAFEAMNNAGHLGKRMIVILNDN-EMSI--------APPVGALSNYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P    +E AKG    +  P  E A +  E  +G+    G TLFEELG  Y+GP+DGH+
Sbjct: 205 GDPFHSFKEAAKGAVSLLPPPFQEGAKRAKEMLKGI--AVGGTLFEELGFSYLGPLDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ +L  VK  + TGPVLIHVVT+KG+GY  AE A+D+ H  AKFD  +GKQ K+ +
Sbjct: 263 MGQLLPVLRTVK-ARATGPVLIHVVTKKGKGYAPAETASDRGHATAKFDVPSGKQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F E L+  A  D  + A+ AAM  GTGL L  +RFP+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFGEELVRLAAEDSRICAVTAAMPDGTGLQLMDQRFPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA  G++PFCAIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAGLAAGGMRPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V FMA LP MVVMA +DEAEL HMVATAAA D+ P  FRYPRG G+GVE+P   KG  LE
Sbjct: 442 VAFMANLPGMVVMAAADEAELKHMVATAAAHDEGPIAFRYPRGEGVGVEMP--EKGQVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ EG RVALL +G  ++  L A+  L++ G+  TVADARF KPLD  +I  LA 
Sbjct: 500 IGKGRMIREGGRVALLSFGARLKEVLDAAEALQARGITPTVADARFAKPLDREMILKLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG+IGGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SPAD  A AG+
Sbjct: 560 DHEALITIEEGAIGGFGSHVAQLLADEGVFDKGLKFRSMVLPDIFIDQSSPADMYATAGM 619

Query: 537 TPSHIAATVFNILGQTR 553
               I A V ++LG  R
Sbjct: 620 NAEDIEAKVLDVLGVER 636


>gi|408788445|ref|ZP_11200164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
 gi|408485687|gb|EKJ94022.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium lupini HPC(L)]
          Length = 639

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 321/551 (58%), Positives = 396/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L G    V+AVIGDG+
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDGSDRKVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D+ ++ + AAM  GTGL+     FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA SDEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  L++GKG
Sbjct: 442 ATLPGMVVMAASDEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 500 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 560 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 620 IVSTVFNALGQ 630


>gi|254485860|ref|ZP_05099065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
 gi|214042729|gb|EEB83367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. GAI101]
          Length = 642

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 314/554 (56%), Positives = 392/554 (70%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGVVPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG AYEAMNNAG L   MIVILNDN ++S+         PPVGA+S+ LSRL +
Sbjct: 154 GDGSMSAGMAYEAMNNAGDLQKRMIVILNDN-EMSIA--------PPVGAMSAYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +E + VAKG    + GP  E A +  +  +GM  G   TLFE+LG  YIGP+DGH+
Sbjct: 205 EEPFQEFKAVAKGAVSMLPGPFREGAKRAKDMLKGMTVGG--TLFEQLGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+ +L  VK  + TGP LIHV+T+KG+GY  AE A DK H  +KF+  TG+Q K+ +
Sbjct: 263 LNQLLPVLRTVK-ARATGPTLIHVITKKGKGYGPAEAARDKGHATSKFNVLTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA+ LIAEA  D  + A+ AAM  GTGLNLF  R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTRVFADTLIAEAARDDKICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  G+KPFC +YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 382 SAALAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V F+A LP  VVMA +DEAEL HMVATAAA DD P  FR+PRG G GV++P   +G+PLE
Sbjct: 442 VAFLANLPGFVVMAAADEAELVHMVATAAAHDDGPIAFRFPRGEGNGVDMP--ERGVPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG+RVALL +GT +     A+  L + G+  T+ADARF KPLD  +I SLA 
Sbjct: 500 IGKGRIITEGKRVALLSFGTRLAEVEKAAEALRAKGITPTIADARFAKPLDREMILSLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q L+ +G+ D  +K+R +VLPD +ID  SP D  A AG+
Sbjct: 560 EHEALITIEEGAVGGFGSHVAQLLSDEGVFDVGLKYRSMVLPDTFIDQASPEDMYAVAGM 619

Query: 537 TPSHIAATVFNILG 550
               I A V ++LG
Sbjct: 620 NAEQIEAKVLDVLG 633


>gi|386350703|ref|YP_006048951.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
 gi|346719139|gb|AEO49154.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
          Length = 622

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 318/549 (57%), Positives = 387/549 (70%), Gaps = 12/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT R ES YD FG GHSSTSISAGLGMA+G  L G   +VVAVIGDG+
Sbjct: 71  IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDARDVVAVIGDGS 130

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG   S +IVILNDN  +S+         PPVGA+S+ LSRL S++  
Sbjct: 131 MSAGMAYEAMNNAGAAKSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLLSSKSW 181

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R +AK +  ++   +   A + +EYARGM++G G TLFEE+G YY+GP+DGH +D L
Sbjct: 182 LSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGG-TLFEEMGFYYVGPIDGHRMDHL 240

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V+     GPVLIHVVT+KG+GY  AE A DKYHGV++F+  TG Q K+  +  S
Sbjct: 241 VPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKPQAPS 300

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L+A A  D  +VA+ AAM GGTGL+     +P RCFDVGIAEQHAVTFAAGL
Sbjct: 301 YTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCFDVGIAEQHAVTFAAGL 360

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPF A+YSSF+QR YDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+
Sbjct: 361 ACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFL 420

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN+VVM  +DEAEL  MV TAA  D  P   RYPRG G+GVE+P   +  PL +GKG
Sbjct: 421 GCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKG 478

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG+ VALL  GT +QSCL A  +L + GL  TVADARF KP D  L+  LA  HEV
Sbjct: 479 RIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEV 538

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LI VEEG+IGGF SHV  +LA  GLLDG +K R L +PDR+ +H +P  Q A+AG+    
Sbjct: 539 LIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQA 598

Query: 541 IAATVFNIL 549
           I   V + L
Sbjct: 599 ITTAVLDAL 607


>gi|83593951|ref|YP_427703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
 gi|118595487|sp|Q2RR29.1|DXS2_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|83576865|gb|ABC23416.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
          Length = 645

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 318/549 (57%), Positives = 387/549 (70%), Gaps = 12/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT R ES YD FG GHSSTSISAGLGMA+G  L G   +VVAVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDARDVVAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG   S +IVILNDN  +S+         PPVGA+S+ LSRL S++  
Sbjct: 154 MSAGMAYEAMNNAGAAKSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLLSSKSW 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R +AK +  ++   +   A + +EYARGM++G G TLFEE+G YY+GP+DGH +D L
Sbjct: 205 LSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGG-TLFEEMGFYYVGPIDGHRMDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V+     GPVLIHVVT+KG+GY  AE A DKYHGV++F+  TG Q K+  +  S
Sbjct: 264 VPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKPQAPS 323

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L+A A  D  +VA+ AAM GGTGL+     +P RCFDVGIAEQHAVTFAAGL
Sbjct: 324 YTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCFDVGIAEQHAVTFAAGL 383

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPF A+YSSF+QR YDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+
Sbjct: 384 ACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFL 443

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN+VVM  +DEAEL  MV TAA  D  P   RYPRG G+GVE+P   +  PL +GKG
Sbjct: 444 GCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKG 501

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG+ VALL  GT +QSCL A  +L + GL  TVADARF KP D  L+  LA  HEV
Sbjct: 502 RIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEV 561

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LI VEEG+IGGF SHV  +LA  GLLDG +K R L +PDR+ +H +P  Q A+AG+    
Sbjct: 562 LIVVEEGAIGGFCSHVATWLANQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQA 621

Query: 541 IAATVFNIL 549
           I   V + L
Sbjct: 622 ITTAVLDAL 630


>gi|418054734|ref|ZP_12692790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
 gi|353212359|gb|EHB77759.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomicrobium
           denitrificans 1NES1]
          Length = 647

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 314/549 (57%), Positives = 397/549 (72%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV RD+ G  NNVV VIGDGA
Sbjct: 98  IRTLRQANGLSGFTKRTESEYDPFGAAHSSTSISAGLGMAVARDMSGGDNNVVCVIGDGA 157

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG  +  +IV+LNDN  +S+         PP GALSS L+R  S+   
Sbjct: 158 MSAGMAYEALNNAGARNERLIVVLNDN-DMSIA--------PPTGALSSYLARTTSSASY 208

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            ++R++AK + +++       AA+++EY R +  G     FEELG YY+GP+DGH++  L
Sbjct: 209 FKVRDIAKQLAQRLPKSWERRAARMEEYTRNLWQGGA--WFEELGFYYVGPIDGHDLGQL 266

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++ K  GP+L+HV+T+KG+GY  AE + DKYHGVAKF+  TG Q K  A   S
Sbjct: 267 LPVLKNVRDAKH-GPILVHVMTKKGKGYAPAEASPDKYHGVAKFNVVTGVQVKPQAAAPS 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EA+ D  +VAI AAM  GTGL++F R FP R FDVGIAEQHAVTFAAGL
Sbjct: 326 YTRVFADSLIQEAKKDPKIVAITAAMPDGTGLDVFGREFPDRTFDVGIAEQHAVTFAAGL 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPF AIYS+F+QR YDQVVHDV +Q LPVRFA+DRAG VGADG TH GSFD+ ++
Sbjct: 386 ATEGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGFVGADGATHAGSFDLAYL 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN V+MA +DEAEL HMVATA +IDDRPS FRYPRG G GV +P   + +P  +GKG
Sbjct: 446 GCLPNFVIMAAADEAELKHMVATAVSIDDRPSAFRYPRGEGTGVAMPEVGEVLP--IGKG 503

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG  VALL  GT +   + A+  L + GL  TVADARF KPLD  LIR LA++HEV
Sbjct: 504 RILREGSTVALLSIGTRLGEAMKAADQLAALGLSTTVADARFMKPLDTDLIRQLAQNHEV 563

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFGSHV+Q+LA +GLL+  +K R  V+PD ++D   P     +AGL+   
Sbjct: 564 LVTIEEGSVGGFGSHVLQYLADNGLLEHGLKVRAKVMPDCFVDQDKPEAMYQKAGLSAGG 623

Query: 541 IAATVFNIL 549
           I  TV + L
Sbjct: 624 IVETVRDAL 632


>gi|428185733|gb|EKX54585.1| 1-deoxy-D-xylulose 5-phosphate synthase [Guillardia theta CCMP2712]
          Length = 756

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 323/585 (55%), Positives = 410/585 (70%), Gaps = 31/585 (5%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK-NNVVAVIGDGAM 61
           T+RQ  GLSGFTKR ESE+DCFG GHSSTSISA LGM+V +DL G+  NN +AVIGDGA+
Sbjct: 163 TLRQWGGLSGFTKRKESEFDCFGAGHSSTSISAALGMSVAKDLTGKPVNNCIAVIGDGAI 222

Query: 62  TAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP-IPPVGALSSALSRLQSNRPL 120
           T G AYEAMN AGYL+  MIVILN+N QVSLPT T     + P GALS + SR+ S+RP 
Sbjct: 223 TGGMAYEAMNCAGYLNQRMIVILNENGQVSLPTGTPSAAGVVPAGALSGSTSRILSSRPF 282

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGS-GSTLFEELGLYYIGPVDGHNVDD 179
           ++ R VAK +TK +   + ++  K+DE+ RG +SG  G+ LFEELG YY+GP+DGH++++
Sbjct: 283 QDARSVAKTLTKLLPEDLQKITRKIDEFGRGFVSGEEGAVLFEELGFYYLGPIDGHDLEN 342

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ ILE ++++++  PVL+HV TEKG GY  A KA+DK HGVA+FD ATGKQ K  +   
Sbjct: 343 LIPILENLRDSESKKPVLLHVKTEKGYGYLPALKASDKMHGVAQFDIATGKQKKPKSGPP 402

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT+ FA+ L+  A  D  V  I AAM GGTGL+ F + FP R FDVGIAEQHAVTFAAG
Sbjct: 403 SYTSVFADTLVELARQDPTVCGITAAMPGGTGLDKFGKIFPKRTFDVGIAEQHAVTFAAG 462

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A +GLKPFCAIYS+F+QR YDQV+HD  +Q LPVRF +DRAGLVG DGPTH G FD+ +
Sbjct: 463 MAVDGLKPFCAIYSTFLQRGYDQVIHDCIIQSLPVRFMVDRAGLVGNDGPTHHGCFDLAY 522

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE-------------- 405
           +  LPN+V+MAP+DE EL  MV TA AIDD+PS  RYPRGNG G E              
Sbjct: 523 LGTLPNIVIMAPADEIELMRMVKTAHAIDDKPSVVRYPRGNGFGAEGLNKLFGYNLKSTP 582

Query: 406 LPPGNKGIPLEVGKGRILIEGE-----RVALLGYGTAVQSCLAASALL----ESNGLRLT 456
           LP     +P  VG+GR++   +     +VA+L  GT +  C A  AL     E NG+ +T
Sbjct: 583 LPSEVSALP--VGEGRMIRRADPEAKTKVAILSLGTRL--CEAVRALRMIQQEGNGIGVT 638

Query: 457 VADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPL 515
           +ADAR+ KPLD  LIRSL + H+VLITVEEG++GGFG HV  FL  +GLLD G  + R +
Sbjct: 639 IADARYMKPLDKELIRSLVEEHDVLITVEEGAVGGFGDHVNHFLTNEGLLDSGKCRLRVM 698

Query: 516 VLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 560
           VLPD++++ G    Q   AGL   HIAAT F  L +  EALE+++
Sbjct: 699 VLPDQFVEAGGQKQQYDFAGLQAKHIAATAFRALDRQGEALEVLA 743


>gi|347526939|ref|YP_004833686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
 gi|345135620|dbj|BAK65229.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. SYK-6]
          Length = 645

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 314/557 (56%), Positives = 394/557 (70%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES+YD FG  HSSTSISA LG A+   L GR    +AVIGDGA
Sbjct: 97  IRTLRQGGGLSGFTKRSESQYDPFGAAHSSTSISAALGFAIANRLTGRSGKAIAVIGDGA 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L+R+ S+R  
Sbjct: 157 MSAGMAYEAMNNAREAGNRLIVILNDN-DMSIA--------PPVGGLSAYLARIVSSREF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K + +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 208 LSVREALKKLARKLPRPLHHAARKTDEFARGM--AMGGTLFEELGFYYVGPIDGHNLDQL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GPVL+HVVT+KG+GY  AE AADKYHGV KF+  TG+Q K+ A   S
Sbjct: 266 IPVLENVRDM-ADGPVLVHVVTQKGKGYAPAEAAADKYHGVQKFNVITGEQVKAPAGPPS 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+ EA+ D  VVAI AAM  GTGL+ F + FP RCFDVGIAEQHAVTFAAGL
Sbjct: 325 YTNVFAQALMDEAQRDDRVVAITAAMPSGTGLDKFQKAFPARCFDVGIAEQHAVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 385 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYL 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HMV TAA  D+ P   RYPRGNG+GV LP   +   L +GKG
Sbjct: 445 ATLPNMVVMAAADEAELVHMVHTAACHDESPIALRYPRGNGVGVALPATPE--RLAIGKG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG+++A+L  GT ++  L A+  L++ GL  +VAD RF KPLD ALIR L  +H+V
Sbjct: 503 RLLREGKKIAILSLGTRLEEALKAADTLDARGLSTSVADLRFAKPLDEALIRRLLTTHDV 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEG+IGG G+HV+   + +GL+DG ++ R + LPD + D   P  Q   A L   H
Sbjct: 563 AVTIEEGAIGGLGAHVLTLASDEGLIDGGLRLRTMRLPDIFQDQDKPEKQYDDARLNAPH 622

Query: 541 IAATVFNILGQTREALE 557
           I  TV   L      +E
Sbjct: 623 IVETVLTALRHNSAGVE 639


>gi|87198187|ref|YP_495444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|118595595|sp|Q2GC13.1|DXS_NOVAD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|87133868|gb|ABD24610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 640

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 318/551 (57%), Positives = 392/551 (71%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FGT HSSTSISA LG A+   L GR    +AVIGDGA
Sbjct: 94  IRTLRQAGGLSGFTKRSESEYDPFGTAHSSTSISAALGFAIANKLSGRLGKGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L+RL S+ P 
Sbjct: 154 MSAGMAYEAMNNAEAAGNRLIVILNDN-DMSIA--------PPVGGLSAYLARLVSSGPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++A+ +++++  P+HE A K DE+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGLRDIARRLSRKLPRPLHEAARKTDEFARGM--AMGGTLFEELGFYYVGPIDGHNIDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GP LIHVVT+KG+GY  AE AADKYHGV KFD  TG+Q K+ A   +
Sbjct: 263 IPVLENVRDA-AEGPCLIHVVTQKGKGYAPAEAAADKYHGVQKFDVITGEQVKAKAAAPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L   A+ D  + AI AAM  GTG++ F +  P R FDVGIAEQHAVTFAAGL
Sbjct: 322 YQNVFGETLAKLADADPTICAITAAMPSGTGVDKFAKAHPDRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG++PFCAIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAEGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPN+VVMA +DEAEL HM  TAA  D  P  FRYPRGNG+GV LP     +P  LE+G
Sbjct: 442 ATLPNLVVMAAADEAELVHMTYTAALHDSGPIAFRYPRGNGVGVPLPE----VPERLEIG 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRI+ +G +VALL  GT +   L A+  L++ GL  TVAD RF KPLD ALIR L  +H
Sbjct: 498 KGRIIRQGSKVALLSLGTRLAEALKAADQLDARGLSTTVADLRFAKPLDVALIRQLMTTH 557

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +V++TVEEGSIGG G+HV+   + +GL+DG +K R + LPD + DH +P  Q  +AGL  
Sbjct: 558 DVIVTVEEGSIGGLGAHVLTMASDEGLVDGGLKIRTMRLPDLFQDHDAPEKQYDEAGLNA 617

Query: 539 SHIAATVFNIL 549
            HI  TV   L
Sbjct: 618 PHIVDTVLKAL 628


>gi|424909631|ref|ZP_18333008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae USDA 2370]
 gi|392845662|gb|EJA98184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium leguminosarum
           bv. viciae USDA 2370]
          Length = 636

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 396/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L G    V+AVIGDG+
Sbjct: 91  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDGSDRKVIAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 151 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 202 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 260 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D+ ++ + AAM  GTGL+     FP R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTSVFAEALIQEATLDEKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 379 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA SDEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  L++GKG
Sbjct: 439 ATLPGMVVMAASDEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HE+
Sbjct: 497 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEI 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 557 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAG 616

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 617 IISTVFNALGQ 627


>gi|346995044|ref|ZP_08863116.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TW15]
          Length = 642

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 315/556 (56%), Positives = 394/556 (70%), Gaps = 18/556 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGVTPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L+  +IVILNDN ++S+         PPVGALS+ LSR+ +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLNKRLIVILNDN-EMSIA--------PPVGALSNYLSRIYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P  +L+  AKG    +  P  E A +  +  +GM    G TLFEELG  Y+GP+DGH+
Sbjct: 205 EEPFHDLKAAAKGAVSLLPEPFREGAKRAKDMLKGM--AMGGTLFEELGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  K TGP+LIHV+T+KG+GY  AE+A DK H  AKFD  TG+Q K+ +
Sbjct: 263 LDQLLPVLRAVK-AKATGPILIHVLTKKGKGYAPAEQARDKGHATAKFDVVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L+ EA  D  +VA+ AAM  GTGLNLF  R+P+RCFDV IAEQH VTF
Sbjct: 322 NAPSYTSVFGKTLVEEAARDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 SAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAVDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++A LP MVVMA +DEAEL HMVATA A DD P  FRYPRG G+GV+LP   +G  LE
Sbjct: 442 IAYLANLPGMVVMAAADEAELMHMVATAVAYDDGPIAFRYPRGEGVGVDLP--ERGEVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ +G RVALL +GT +     A+  L + G+  T+ADARF KPLD  LI  LA 
Sbjct: 500 IGKGRIIQKGARVALLSFGTRLAEVQKAAEALSARGITPTIADARFAKPLDRDLILDLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LIT+EEG++GGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SPAD  A AG+
Sbjct: 560 NHEALITIEEGAVGGFGSHVAQLLADEGVFDEGLKYRSMVLPDIFIDQASPADMYAVAGM 619

Query: 537 TPSHIAATVFNILGQT 552
               I A V +ILG T
Sbjct: 620 DAEQIEAKVLSILGVT 635


>gi|319898602|ref|YP_004158695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
           73]
 gi|319402566|emb|CBI76111.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bartonella clarridgeiae
           73]
          Length = 640

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 315/552 (57%), Positives = 396/552 (71%), Gaps = 15/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           + T+RQ  GLSGFTKRSES YD FG GHSSTSISAGLGMA+   LK   + N+++VIGDG
Sbjct: 93  IRTLRQEGGLSGFTKRSESVYDPFGAGHSSTSISAGLGMAMVSALKAEERRNIISVIGDG 152

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           A++AG AYEAMNNAG LD+ +IVILNDN              PP GA+S+ L+RL S   
Sbjct: 153 AISAGMAYEAMNNAGALDARLIVILNDNDM---------SIAPPTGAMSAHLARLVSRPS 203

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            R LR+  K ++K++     E A   +E+AR    G   TLF+ELG YY+GP+DGHN   
Sbjct: 204 YRNLRQRIKILSKKLPKFFLEKARYSEEFARSFFVGG--TLFDELGFYYVGPIDGHNFGH 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ +L+ V+     GPVL+HVVT KG+GY  AE ++DKYHGV +FD  TGKQ K+ + + 
Sbjct: 262 LLPVLKNVRECPD-GPVLVHVVTHKGKGYAPAEASSDKYHGVNRFDVITGKQVKAQSNSL 320

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F++ALI EA  D  +V I AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAG
Sbjct: 321 SYTKVFSKALIEEATHDNKIVGITAAMPNGTGLDFFAEKFPKRMFDVGIAEQHAVTFAAG 380

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EG KPF AIYS+F+QRAYDQ++HDV LQKLPVRFA+DRAG VGADG TH GSFD+ F
Sbjct: 381 IASEGYKPFVAIYSTFLQRAYDQIIHDVSLQKLPVRFAIDRAGFVGADGATHAGSFDIVF 440

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LP+ V+MAPSDE EL HMV TAAA D  P  FRYPRG GIG++LP   +G  LE+GK
Sbjct: 441 LATLPDFVIMAPSDEVELMHMVRTAAAYDQGPISFRYPRGEGIGMDLP--QRGELLEIGK 498

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR+L EG ++AL+ +GT +   L A+  L   GL  TVADARF KPLD  L+R LA+ HE
Sbjct: 499 GRVLCEGSKIALVCFGTRLSEVLVAADELVVEGLSTTVADARFAKPLDRDLMRRLAREHE 558

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           VL+T+EEG+IGGFG+H++QFL+Q+GLL+  +K R L  PD+Y++HG P   L+Q GL  +
Sbjct: 559 VLVTIEEGAIGGFGAHLLQFLSQEGLLEHGLKVRTLKFPDKYLNHGLPDKVLSQIGLDAT 618

Query: 540 HIAATVFNILGQ 551
            I  TVF+ LG+
Sbjct: 619 GIINTVFSALGR 630


>gi|386348075|ref|YP_006046323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
 gi|346716511|gb|AEO46526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum F11]
          Length = 622

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 317/549 (57%), Positives = 386/549 (70%), Gaps = 12/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT R ES YD FG GHSSTSISAGLGMA+G  L G   +VVAVIGDG+
Sbjct: 71  IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDARDVVAVIGDGS 130

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG   S +IVILNDN  +S+         PPVGA+S+ LSRL S++  
Sbjct: 131 MSAGMAYEAMNNAGAAKSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLLSSKSW 181

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R +AK +  ++   +   A + +EYARGM++G G TLFEELG YY+GP+DGH +D L
Sbjct: 182 LSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGG-TLFEELGFYYVGPIDGHRMDHL 240

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V+     GPVLIHVVT+KG+GY  AE A DKYHGV++F+  TG Q K+  +  S
Sbjct: 241 VPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKPQAPS 300

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L+A A  D  +V + AAM GGTGL+     +P RCFDVGIAEQHAVTFAAGL
Sbjct: 301 YTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGIAEQHAVTFAAGL 360

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPF A+YSSF+QR YDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+
Sbjct: 361 ACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFL 420

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN+VVM  +DEAEL  MV TAA  D  P   RYPRG G+GVE+P   +  PL +GKG
Sbjct: 421 GCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKG 478

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG+ VALL  GT +QSCL A  +L + GL  TVADARF KP D  L+  LA  HEV
Sbjct: 479 RIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEV 538

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LI VEEG+IGGFG+HV  +L   GLLDG +K R L +PDR+ +H +P  Q A+AG+    
Sbjct: 539 LIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQA 598

Query: 541 IAATVFNIL 549
           I   V + L
Sbjct: 599 ITTAVLDAL 607


>gi|254449568|ref|ZP_05063005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
           238]
 gi|198263974|gb|EDY88244.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter arcticus
           238]
          Length = 626

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 311/550 (56%), Positives = 392/550 (71%), Gaps = 16/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSES YDCFG  HSSTSISA LG AV RDL G   + +AVIGDGA
Sbjct: 85  IRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAALGFAVARDLGGEGGDAIAVIGDGA 144

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG+L   +IVILNDN ++S+         PPVGA+SS LSRL +  P 
Sbjct: 145 MSAGMAYEALNNAGHLKKRLIVILNDN-EMSIA--------PPVGAMSSYLSRLYAGDPF 195

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +E +  AKG    + GP+ E A +  +  + M  G   TLFEELG  Y+GP+DGH+++ L
Sbjct: 196 QEFKAAAKGAVSFLPGPLQEGARRAKDMLKHMTVGG--TLFEELGFSYLGPIDGHDMEQL 253

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L  VK T+ TGP+LIH +T+KG+GY  AE  AD+ H  AKFD  TG+Q K+ +   S
Sbjct: 254 LSVLRTVK-TRATGPILIHAITKKGKGY--AENRADRGHATAKFDVVTGEQKKTPSNAPS 310

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAE+LI +A  D  +VA+ AAM  GTGL+ F+ RF +RCFDVGIAEQHAVTF AGL
Sbjct: 311 YTSVFAESLIKQATKDDKIVAVTAAMPDGTGLDRFMSRFASRCFDVGIAEQHAVTFCAGL 370

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFC IYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 371 AAGGMKPFCTIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 430

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL  MVATA A D  P  FR+PRG G+GVE+P  +   PLE+GKG
Sbjct: 431 ANLPGFVVMAAADEAELTRMVATAVAHDSGPIAFRFPRGEGVGVEIP--DDAQPLEIGKG 488

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG RVA+L +GT +Q    A   L + G+  TVADARF KPLD  +I  LA+ HE 
Sbjct: 489 RMIREGSRVAILSFGTRLQEVEKACEALAAKGITPTVADARFVKPLDREMILGLARDHEA 548

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFGSHV Q LA++G+ D  +K+R +V PD +ID   P +    AG+   H
Sbjct: 549 LITVEEGAVGGFGSHVAQLLAEEGVFDHGLKFRSMVFPDIFIDQAGPREMYEVAGMNAEH 608

Query: 541 IAATVFNILG 550
           I A V ++LG
Sbjct: 609 IEAKVLDVLG 618


>gi|260431853|ref|ZP_05785824.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415681|gb|EEX08940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 642

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 315/554 (56%), Positives = 392/554 (70%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRQKGGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGVTPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALS+ LSR+ +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLKKRLIVILNDN-EMSIA--------PPVGALSNYLSRIYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P  +L+  AKG    +  P  E A +  E  +GM    G TLFEELG  Y+GP+DGH+
Sbjct: 205 EEPFHDLKAAAKGAVSLLPEPFREGAKRAKEMLKGM--AVGGTLFEELGFSYVGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGP+LIH +T+KG+GY  AE+A DK H  AKFD  TGKQ K+ +
Sbjct: 263 LDQLLPVLRTVK-ARATGPILIHALTKKGKGYAPAEQARDKGHATAKFDVVTGKQQKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L+ EA  D  +VA+ AAM  GTGLNLF  R+P+RCFDV IAEQH VTF
Sbjct: 322 NAPSYTSVFGKTLVDEASRDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  GLKPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 SAALAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + +++ LP MVVMA +DEAEL HMVATAAA DD P  FRYPRG G+GV+LP   +G  LE
Sbjct: 442 IAYLSNLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVGVDLP--ERGQVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++  G RVALL +GT +     A+  L + G+  T+ADARF KPLD  LI  LA 
Sbjct: 500 IGKGRMIQSGARVALLSFGTRLAEVQKAAESLTARGITPTIADARFAKPLDRDLILDLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LIT+EEG+IGGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SPAD  A AG+
Sbjct: 560 NHEALITIEEGAIGGFGSHVAQLLADEGVFDRGLKYRSMVLPDIFIDQASPADMYAVAGM 619

Query: 537 TPSHIAATVFNILG 550
              HI A V ++LG
Sbjct: 620 NAEHIEAKVLSVLG 633


>gi|83945404|ref|ZP_00957752.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis sp. HTCC2633]
 gi|83851238|gb|EAP89095.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 635

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 324/554 (58%), Positives = 398/554 (71%), Gaps = 21/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLK---GRKNNVVAVIG 57
           + T+RQ  GLSGFTKRSES+YD FG  H+STSISAGLG AVGRDLK   GRK  VVAVIG
Sbjct: 91  IRTLRQGGGLSGFTKRSESDYDPFGAAHASTSISAGLGFAVGRDLKHEEGRK--VVAVIG 148

Query: 58  DGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN 117
           DG+M+AG AYEAMNNAG +  D+IVILNDN  +S+         PPVGA+S   +R  S+
Sbjct: 149 DGSMSAGMAYEAMNNAGDMKKDLIVILNDN-DMSIA--------PPVGAMSHYFARQVSS 199

Query: 118 RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           +    +R++ +GV + +G  + E A + +EY RGM    G TLFEE+G  Y+GP+DGH++
Sbjct: 200 KSYNSIRKLGRGVAEALG--VKEHARRAEEYLRGM--AMGGTLFEEMGFRYVGPIDGHDM 255

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           D LVA+L  V++    GP+LIH VT+KG+GY  AE A DKYHGVAKF+  TG+Q KS   
Sbjct: 256 DQLVAVLRNVRDAGE-GPILIHAVTQKGKGYAPAEAADDKYHGVAKFNVVTGEQQKSKPA 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  FA ALI  AE D+ + A+ AAM GGTG++ F   +P R FDVGIAEQHAVTFA
Sbjct: 315 APSYTGVFANALIQLAETDEKICAVTAAMPGGTGVDKFAAAYPDRAFDVGIAEQHAVTFA 374

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA EGLKP+ AIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADG TH G+FDV
Sbjct: 375 AGLAAEGLKPYAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGATHAGAFDV 434

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            +M  LP MV+MA +DEAEL  MVATA  IDDRPS FRYPRG G+GVE+P   + IPLE+
Sbjct: 435 GYMGALPGMVLMAAADEAELARMVATANEIDDRPSAFRYPRGEGLGVEIP--KELIPLEI 492

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKGRI+ EG  VA+L +G  +   L ++  L + GL  TVADARF KPLDH LIR+L + 
Sbjct: 493 GKGRIVREGSGVAILSFGARLGEVLKSADELAAYGLNPTVADARFAKPLDHDLIRTLVRE 552

Query: 478 HEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           HEVLIT+EEG++GGFG+ V+ FLA+DG LD  VK R + LPD + D  SP      AGL 
Sbjct: 553 HEVLITIEEGAVGGFGAFVLHFLAEDGALDAGVKIRTMTLPDIFQDQDSPYGMYETAGLN 612

Query: 538 PSHIAATVFNILGQ 551
             HI A V + LG+
Sbjct: 613 AKHITAKVLDALGR 626


>gi|83591394|ref|YP_425146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
 gi|118595483|sp|Q2RYD6.1|DXS1_RHORT RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|83574308|gb|ABC20859.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodospirillum rubrum ATCC
           11170]
          Length = 645

 Score =  616 bits (1589), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 317/549 (57%), Positives = 386/549 (70%), Gaps = 12/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT R ES YD FG GHSSTSISAGLGMA+G  L G   +VVAVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTLREESPYDPFGAGHSSTSISAGLGMAIGSALAGDARDVVAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG   S +IVILNDN  +S+         PPVGA+S+ LSRL S++  
Sbjct: 154 MSAGMAYEAMNNAGAAKSRLIVILNDN-DMSIA--------PPVGAMSAYLSRLLSSKSW 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R +AK +  ++   +   A + +EYARGM++G G TLFEELG YY+GP+DGH +D L
Sbjct: 205 LSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGG-TLFEELGFYYVGPIDGHRMDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V+     GPVLIHVVT+KG+GY  AE A DKYHGV++F+  TG Q K+  +  S
Sbjct: 264 VPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRFNVVTGVQEKAKPQAPS 323

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L+A A  D  +V + AAM GGTGL+     +P RCFDVGIAEQHAVTFAAGL
Sbjct: 324 YTAVFGKQLVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGIAEQHAVTFAAGL 383

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPF A+YSSF+QR YDQVVHDV LQKLPVRFA+DRAG VGADG TH G FD+ F+
Sbjct: 384 ACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFVGADGATHGGVFDMAFL 443

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN+VVM  +DEAEL  MV TAA  D  P   RYPRG G+GVE+P   +  PL +GKG
Sbjct: 444 GCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQ--PLAIGKG 501

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG+ VALL  GT +QSCL A  +L + GL  TVADARF KP D  L+  LA  HEV
Sbjct: 502 RIVREGKGVALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEV 561

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LI VEEG+IGGFG+HV  +L   GLLDG +K R L +PDR+ +H +P  Q A+AG+    
Sbjct: 562 LIVVEEGAIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQA 621

Query: 541 IAATVFNIL 549
           I   V + L
Sbjct: 622 ITTAVLDAL 630


>gi|402825295|ref|ZP_10874597.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
 gi|402261169|gb|EJU11230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. LH128]
          Length = 640

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 323/549 (58%), Positives = 391/549 (71%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FGT HSSTSISA LG A+G  +KG+    +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAALGFAMGSKIKGQPGRGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+RL S+   
Sbjct: 154 MSAGMAYEAMNNAREAGNRLVVILNDN-DMSI--------APPVGGLSAYLARLVSSGQF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE+A+   +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGH++D L
Sbjct: 205 LGLRELARKFARKLPRPLHLAAKKTDEFARGM--AMGGTLFEELGFYYVGPIDGHDLDAL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +LE V++    GP+L+HVVT+KG+GY  AE AADKYHGV KFD  TG+Q K+ A   S
Sbjct: 263 VPVLENVRDAGE-GPILVHVVTQKGKGYGPAESAADKYHGVQKFDVVTGEQAKAPAGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+AEAE D  + AI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGTFAKALVAEAEKDATICAITAAMPSGTGLDKFAQMFPERSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HMV TAA  D  P  FRYPRGNG G  LP   +   LE+GKG
Sbjct: 442 ATLPNMVVMAAADEAELVHMVHTAAQYDAGPIAFRYPRGNGTGAALPETPQ--LLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  SHEV
Sbjct: 500 RIVREGTKVALLSLGTRLGEALKAADQLEAKGLSTTVADLRFAKPLDTDLIRRLMLSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEGSIGG G+HV+   + +GL D  +K R + LPD + DH  P  Q  +AGL    
Sbjct: 560 VVTVEEGSIGGLGAHVLTMASDEGLTDAGLKIRTMRLPDTFQDHDKPETQYDEAGLNAPQ 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVNTVLKAL 628


>gi|112950411|gb|ABI26724.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
          Length = 639

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 395/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L      V+AVIGDG+
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDESDRKVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D  ++ + AAM  GTGL+     FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  LE+GKG
Sbjct: 442 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 500 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 560 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPGTMYANAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 620 IVSTVFNALGQ 630


>gi|298715557|emb|CBJ28110.1| 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast precursor
           [Ectocarpus siliculosus]
          Length = 795

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 325/609 (53%), Positives = 412/609 (67%), Gaps = 61/609 (10%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGR-DLKGRKNNVVAVIGDG 59
           MH++RQ+ GLSGF KRSESE+DCFG GHSSTSIS+ +GM+VG+  L  R+NN VAVIGDG
Sbjct: 177 MHSLRQSGGLSGFAKRSESEFDCFGAGHSSTSISSAMGMSVGKSQLSKRRNNCVAVIGDG 236

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNR 118
           A+T G A+EAMN AGYL    +VILNDN QVSLPT T   G + P GALSS   RL S+R
Sbjct: 237 AITGGMAFEAMNCAGYLGVRHMVILNDNGQVSLPTGTHSAGGVVPAGALSSYTGRLMSSR 296

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
             + +R+VAK   K +   +  + AK+DEYARGM+SG   TLFEELG YY+GPVDGH++ 
Sbjct: 297 SFKSVRDVAKAFNKLLPSNIQNVNAKIDEYARGMMSGG--TLFEELGYYYVGPVDGHDLA 354

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LV ILE +++ K   PVL+H+ TEKG GYP A  A+DKYHGVAKF+ ATGKQ K ++  
Sbjct: 355 NLVPILENIRDKKDDKPVLLHIRTEKGMGYPPAMAASDKYHGVAKFNVATGKQHKGTSAN 414

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            S T+ FA  LI  A  D+ VV I AAM GGTG+++F RRFP R +DVGIAEQHAVTFAA
Sbjct: 415 PSLTSVFANTLIDIATEDRSVVGITAAMPGGTGMDMFGRRFPKRTYDVGIAEQHAVTFAA 474

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EGLKPFC +YS+FMQRAYDQV+HDV +QKLPVR  +DRAGLVG DGPTH GSFD+T
Sbjct: 475 GMAVEGLKPFCCVYSTFMQRAYDQVMHDVVVQKLPVRMILDRAGLVGNDGPTHHGSFDLT 534

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV------------EL 406
           ++  LP++V+MAPSDE EL +M+ TA AIDD+PS  RYPRG G G+            E+
Sbjct: 535 YLGTLPHIVIMAPSDEIELMNMIQTAYAIDDKPSVVRYPRGTGYGLEKLRSLFGYELDEM 594

Query: 407 PPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLE------------ 449
           P   KG  +E+GKGRI+        ++  +L  GT +   L A+  LE            
Sbjct: 595 PA--KGEEVEIGKGRIVRRPRATARQKAVILSLGTRLAPSLEAAIQLEDSFFLVGIGTPE 652

Query: 450 -------------SNG------------LRLTVADARFCKPLDHALIRSLAKSHEVLITV 484
                         NG            + +TVADARF KPLD  LIR LA  H+ ++TV
Sbjct: 653 CPEGGGGGACGVEGNGGAEQSQAADNPDMGVTVADARFMKPLDVDLIRRLAGEHDAMLTV 712

Query: 485 EEGSIGGFGSHVVQFLAQDGLL-DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAA 543
           EE ++GGFG+HV+ F+  DGL+ DG +K RP+VLPD +I+ G+  +Q  +AGL+  HI A
Sbjct: 713 EENAVGGFGAHVLHFMVLDGLVDDGNLKMRPMVLPDTFIEAGTQTEQYEEAGLSAGHIRA 772

Query: 544 TVFNILGQT 552
           +V  +  QT
Sbjct: 773 SVLRLFDQT 781


>gi|417859093|ref|ZP_12504150.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
           F2]
 gi|338825097|gb|EGP59064.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens
           F2]
          Length = 636

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 395/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L      V+AVIGDG+
Sbjct: 91  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDESDRKVIAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 151 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 202 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 260 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D  ++ + AAM  GTGL+     FP+R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 379 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  LE+GKG
Sbjct: 439 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILEIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 497 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLASHHEV 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 557 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAG 616

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 617 IVSTVFNALGQ 627


>gi|126730372|ref|ZP_01746183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
 gi|126709105|gb|EBA08160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sagittula stellata E-37]
          Length = 649

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 315/557 (56%), Positives = 395/557 (70%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 102 IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGACDTGHGDAIAVI 161

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EA+NNAG+L   +IVILNDN ++S+         PP GALSS L+RL +
Sbjct: 162 GDGAMSAGMAFEALNNAGHLKKRLIVILNDN-EMSI--------APPTGALSSYLTRLYA 212

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P  +L+  AKG    +  P  E A +  E  +GM    G TLFEELG  Y+GP+DGH+
Sbjct: 213 EAPFHDLKAAAKGAVSLLPEPFREGAKRAKEMLKGM--AVGGTLFEELGFSYLGPIDGHD 270

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGP+LIH +T KG+GY +AE AADK H  AKFD  TG+Q KS +
Sbjct: 271 LDQLLPVLRTVK-ARATGPILIHALTRKGKGYSHAEHAADKGHARAKFDVVTGEQKKSPS 329

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FAEAL+ EA  D  + A+ AAM  GTGL+LF  R+P+RCFDVGIAEQH VTF
Sbjct: 330 NAPSYTKVFAEALMQEAAEDSRICAVTAAMPDGTGLDLFAERYPSRCFDVGIAEQHGVTF 389

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  G++PFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GS+D
Sbjct: 390 SAGLAAGGMRPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSYD 449

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V +++ LP  VVMA +DEAEL HMVATAAA D+ P  FRYPRG G GVE+P   +G+PL+
Sbjct: 450 VAYLSNLPGFVVMAAADEAELKHMVATAAAHDEGPIAFRYPRGEGEGVEMP--VRGVPLQ 507

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G GR++ EG RVA+L +GT +   + A+  LE+ G+ +TVADARF KPLD  L+  LA+
Sbjct: 508 IGVGRVMREGTRVAILSFGTRLGESIKAAEALEARGVSVTVADARFAKPLDRDLVLRLAR 567

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LITVEEG++GGFGSHV Q LA++G+ D  +K+R +VLPD +ID  SP D  A A L
Sbjct: 568 EHEALITVEEGAVGGFGSHVAQLLAEEGVFDRGLKYRSMVLPDIFIDQASPRDMYAVAQL 627

Query: 537 TPSHIAATVFNILGQTR 553
               I A V + LG  R
Sbjct: 628 NAEDIEAKVLSALGVER 644


>gi|334139802|ref|YP_004533000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
 gi|333937824|emb|CCA91182.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. PP1Y]
          Length = 640

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/549 (58%), Positives = 391/549 (71%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FGT HSSTSISA LG A+   L  +    +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAALGFAIANKLSNQPGRGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L++L S+RP 
Sbjct: 154 MSAGMAYEAMNNAREAGNRLVVILNDN-DMSI--------APPVGGLSAYLAQLVSSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ A+ V++++   +H  A K DE+ARGM    G TLFEELG YY+GPVDGHN++ L
Sbjct: 205 LNIRDFARKVSRRLPEALHRAAKKTDEFARGM--AMGGTLFEELGFYYVGPVDGHNLEQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + ILE V++    GP+LIHVVT+KG+GY  AE+AADKYHGV KF+  TG+Q K+ A   S
Sbjct: 263 IPILENVRDA-AEGPILIHVVTKKGKGYAPAEEAADKYHGVQKFNVVTGEQAKAPAGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEA+ D  V AI AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFAKALIAEAKGDPRVCAITAAMPSGTGLDKFASQFPERSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HMV TAA  D  P  FRYPRGNG GV LP   K   LE+GKG
Sbjct: 442 ATLPNFVVMAAADEAELVHMVHTAAQHDSGPIAFRYPRGNGTGVALP--EKPEVLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  SHEV
Sbjct: 500 RIVREGTKVALLSLGTRLGEALKAADTLEAKGLSTTVADLRFAKPLDSELIRKLMLSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEGSIGG G+HV+   + +GL D  ++ R + LPD + DH  P  Q  +AGL    
Sbjct: 560 VVTVEEGSIGGLGAHVLTMASDEGLTDNGLRIRTMRLPDVFQDHDKPEAQYDEAGLNAPQ 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVDTVLKAL 628


>gi|37903541|gb|AAP56243.1| 1-deoxy-D-xylulose 5-phosphate synthase [Agrobacterium tumefaciens]
          Length = 639

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 321/551 (58%), Positives = 395/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L      V+AVIGDG+
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDESDRKVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D  +V + AAM  GTGL+     FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALIQEATLDDKIVGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  LE+GKG
Sbjct: 442 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 500 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 560 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 620 IVSTVFNALGQ 630


>gi|418296460|ref|ZP_12908303.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355538635|gb|EHH07877.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 639

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 395/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L      V+AVIGDG+
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDESDRKVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D  ++ + AAM  GTGL+     FP+R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPSRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  LE+GKG
Sbjct: 442 ATLPGMVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 500 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD++++   P    A AGL  + 
Sbjct: 560 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 620 IVSTVFNALGQ 630


>gi|359399199|ref|ZP_09192204.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           pentaromativorans US6-1]
 gi|357599405|gb|EHJ61118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium
           pentaromativorans US6-1]
          Length = 640

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/549 (58%), Positives = 391/549 (71%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FGT HSSTSISA LG A+   L  +    +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAALGFAIANKLSNQPGRGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L++L S+RP 
Sbjct: 154 MSAGMAYEAMNNAREAGNRLVVILNDN-DMSI--------APPVGGLSAYLAQLVSSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ A+ V++++   +H  A K DE+ARGM    G TLFEELG YY+GPVDGHN++ L
Sbjct: 205 LNIRDFARKVSRRLPEALHRAAKKTDEFARGM--AMGGTLFEELGFYYVGPVDGHNLEQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + ILE V++    GP+LIHVVT+KG+GY  AE+AADKYHGV KF+  TG+Q K+ A   S
Sbjct: 263 IPILENVRDA-AEGPILIHVVTKKGKGYAPAEEAADKYHGVQKFNVVTGEQAKAPAGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEA+ D  V AI AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFAKALIAEAKGDPRVCAITAAMPSGTGLDKFASQFPERSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HMV TAA  D  P  FRYPRGNG GV LP   K   LE+GKG
Sbjct: 442 ATLPNFVVMAAADEAELVHMVHTAAQHDSGPIAFRYPRGNGTGVALP--EKPEVLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  SHEV
Sbjct: 500 RIVREGTKVALLSLGTRLGEALKAADTLEAKGLSTTVADLRFAKPLDSDLIRKLMLSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEGSIGG G+HV+   + +GL D  ++ R + LPD + DH  P  Q  +AGL    
Sbjct: 560 VVTVEEGSIGGLGAHVLTMASDEGLTDNGLRIRTMRLPDVFQDHDKPEAQYDEAGLNAPQ 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVDTVLKAL 628


>gi|118595583|sp|Q5FUB1.2|DXS_GLUOX RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 660

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/566 (56%), Positives = 400/566 (70%), Gaps = 30/566 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN------NVVA 54
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV   L+  ++      NV+A
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYHERNVIA 160

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G   + +IV+LNDN ++S+         PPVG++S  L
Sbjct: 161 VIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDN-EMSI--------APPVGSMSDYL 211

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V K++ G +   A + +EYARGMI+G   TLFEELG YY+GP
Sbjct: 212 SRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGG--TLFEELGFYYVGP 269

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           V+GH++  LV IL  +++    GP+L+H++TEKGRGY  AE A DKYH V+KF+  TG+Q
Sbjct: 270 VNGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFNVVTGEQ 329

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+ A   SYT+ F+  L+  A+ D  ++ I AAM  GTGLN F + +P R FDVGIAEQ
Sbjct: 330 KKAPAGPPSYTSIFSRELMRRAKTDDKLITITAAMPSGTGLNAFAKAYPDRFFDVGIAEQ 389

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 390 HAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATH 449

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLPNMVVMAPSDE EL H  ATA   D  P  FRYPRGNGIG++LP   K
Sbjct: 450 AGAFDLNYLCCLPNMVVMAPSDEVELLHATATACEYDAGPIAFRYPRGNGIGLDLP--EK 507

Query: 412 GIPLEVGKGRILIEGER-------VALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 464
           G  LE+GKGRI+ E  R       VA+L  G  +   L A+  L + G+ +TVADARF K
Sbjct: 508 GEVLEIGKGRIVREARRAPNARGGVAILSLGPRMHESLRAADQLAAQGVPVTVADARFAK 567

Query: 465 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           P+D AL+  LA+ HEV IT+EEG+IGGF S VVQ LA+ GLLD  VK+RP+ LPDRYIDH
Sbjct: 568 PIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQHLAETGLLD-KVKFRPMALPDRYIDH 626

Query: 525 GSPADQLAQAGLTPSHIAATVFNILG 550
            +   Q   AGLT  HI  T  + LG
Sbjct: 627 NTQDAQYEDAGLTAPHIVRTAADALG 652


>gi|89069937|ref|ZP_01157270.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
           HTCC2516]
 gi|89044491|gb|EAR50619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanicola granulosus
           HTCC2516]
          Length = 637

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 316/550 (57%), Positives = 388/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGF KRSES YD FG  HSSTSISA LG A  RDL G   + +AVIGDGA
Sbjct: 94  IRTLRQKDGLSGFCKRSESPYDPFGAAHSSTSISAALGFAAARDLGGDAGDAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG+L   +IVILNDN ++S+         PPVGA+SS LSRL +  P 
Sbjct: 154 MSAGMAYEAMNNAGHLGKRLIVILNDN-EMSIA--------PPVGAMSSYLSRLYAGAPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +EL+  AKG    +  P  + A +  E  + +    G TLFEELG  Y+GP+DGH+++ L
Sbjct: 205 QELKAAAKGAVSFLPPPFQQGAKRAKEMLKHL--AVGGTLFEELGFSYVGPIDGHDLEQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A+L  VK  +  GP+LIH +T KG+GY  AE AADK HGV+KFD  TG+Q K+ +   S
Sbjct: 263 LAVLRTVK-ARADGPILIHAITRKGKGYAPAEGAADKGHGVSKFDVITGEQKKAKSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+ALIAEA  D  VVA+ AAM  GTGL  F+ R+ +RCFDVGIAEQHAVTFAAG+
Sbjct: 322 YTSVFAKALIAEAARDDKVVAVTAAMPDGTGLKSFMERYASRCFDVGIAEQHAVTFAAGM 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FDV ++
Sbjct: 382 AAGGMKPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDVAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP   VMA +DEAEL  MVATAAA DD P  FR+PRG G+GVE+P   +  PLE+GKG
Sbjct: 442 ANLPGFTVMAAADEAELVRMVATAAAHDDGPIAFRFPRGEGVGVEMPADPQ--PLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG RVA+L +GT +Q    A   L   G+  T+ADARF KPLD  LI  LA+ H+ 
Sbjct: 500 RIVREGSRVAILSFGTRLQEAETACERLAGRGITPTLADARFAKPLDEELILRLAREHDA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFGSHV Q LA+ G+ DG + +R +VLPD +ID  SP D    AGL   H
Sbjct: 560 LITLEEGAIGGFGSHVAQLLAEKGVFDGGLAYRSMVLPDIFIDQASPRDMYDVAGLNAEH 619

Query: 541 IAATVFNILG 550
           I   V   LG
Sbjct: 620 IEQKVLEALG 629


>gi|58038727|ref|YP_190691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
           621H]
 gi|58001141|gb|AAW60035.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans
           621H]
          Length = 669

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/566 (56%), Positives = 400/566 (70%), Gaps = 30/566 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN------NVVA 54
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV   L+  ++      NV+A
Sbjct: 110 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYHERNVIA 169

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G   + +IV+LNDN ++S+         PPVG++S  L
Sbjct: 170 VIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDN-EMSI--------APPVGSMSDYL 220

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V K++ G +   A + +EYARGMI+G   TLFEELG YY+GP
Sbjct: 221 SRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGG--TLFEELGFYYVGP 278

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           V+GH++  LV IL  +++    GP+L+H++TEKGRGY  AE A DKYH V+KF+  TG+Q
Sbjct: 279 VNGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFNVVTGEQ 338

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+ A   SYT+ F+  L+  A+ D  ++ I AAM  GTGLN F + +P R FDVGIAEQ
Sbjct: 339 KKAPAGPPSYTSIFSRELMRRAKTDDKLITITAAMPSGTGLNAFAKAYPDRFFDVGIAEQ 398

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 399 HAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATH 458

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLPNMVVMAPSDE EL H  ATA   D  P  FRYPRGNGIG++LP   K
Sbjct: 459 AGAFDLNYLCCLPNMVVMAPSDEVELLHATATACEYDAGPIAFRYPRGNGIGLDLP--EK 516

Query: 412 GIPLEVGKGRILIEGER-------VALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 464
           G  LE+GKGRI+ E  R       VA+L  G  +   L A+  L + G+ +TVADARF K
Sbjct: 517 GEVLEIGKGRIVREARRAPNARGGVAILSLGPRMHESLRAADQLAAQGVPVTVADARFAK 576

Query: 465 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           P+D AL+  LA+ HEV IT+EEG+IGGF S VVQ LA+ GLLD  VK+RP+ LPDRYIDH
Sbjct: 577 PIDKALVEDLARQHEVFITIEEGAIGGFSSLVVQHLAETGLLD-KVKFRPMALPDRYIDH 635

Query: 525 GSPADQLAQAGLTPSHIAATVFNILG 550
            +   Q   AGLT  HI  T  + LG
Sbjct: 636 NTQDAQYEDAGLTAPHIVRTAADALG 661


>gi|148554381|ref|YP_001261963.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
           RW1]
 gi|166201541|sp|A5V6A9.1|DXS_SPHWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148499571|gb|ABQ67825.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingomonas wittichii
           RW1]
          Length = 639

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 321/557 (57%), Positives = 396/557 (71%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG AV   L  ++   +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAVANKLANKEGRAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVGALS+ L+++ S+RP 
Sbjct: 154 MSAGMAYEAMNNAKQAGNRLIVILNDN-DMSI--------APPVGALSAYLAKIVSSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R  AK V +++  P+H+ A + +EYARGM   +G TLFEELG YY+GPVDGHN+D L
Sbjct: 205 LSMRGFAKRVAQKLPRPIHDFAKRSEEYARGM--ATGGTLFEELGFYYVGPVDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + ILE V++    GP+LIHVVT KG+GY  AE AADKYHGV KFD  +G Q K+     S
Sbjct: 263 LPILENVRDGDH-GPILIHVVTNKGKGYAPAEAAADKYHGVQKFDVVSGVQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+AEA+ D  + AI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFADALVAEAKRDDRICAITAAMPSGTGLDKFGKAFPERSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G +PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 382 AAQGYRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HMV TAA  D  P   RYPRGNG+GV LP   +   L +GKG
Sbjct: 442 ATLPNMVVMAAADEAELVHMVHTAAVHDSGPIALRYPRGNGVGVALPAAPE--RLAIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG+ VALL  GT +   L A+  L++ GL  TVAD RF KPLD A+I++L  SHEV
Sbjct: 500 RIVREGKTVALLSLGTRLGEALRAADQLDALGLSTTVADLRFAKPLDEAMIQTLLTSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEG+IGG G+HV+   +  GL+DG +K R + LPD + +H  P  Q A+AGL    
Sbjct: 560 AVTIEEGAIGGLGAHVLTLASDLGLIDGGLKLRTMRLPDAFQEHDKPEKQYAEAGLDAES 619

Query: 541 IAATVFNILGQTREALE 557
           I ATV   L +  + LE
Sbjct: 620 IVATVLAALHRNSKGLE 636


>gi|56695164|ref|YP_165511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
 gi|81350903|sp|Q5LX42.1|DXS_SILPO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56676901|gb|AAV93567.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria pomeroyi DSS-3]
          Length = 642

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 316/557 (56%), Positives = 394/557 (70%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGVTPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALS+ LSRL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLKKRLIVILNDN-EMSIA--------PPVGALSNYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG    +  P  E A +  E  +GM    G TLFEELG  YIGP+DGH+
Sbjct: 205 EEPFQELKAAAKGAVSLLPEPFREGAKRAKEMLKGM--AVGGTLFEELGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ +L  VK  + TGP+L+HV+T+KG+GY  AE+A D+ H  AKFD  TG+Q K+ +
Sbjct: 263 MGQLLPVLRTVK-ARATGPILLHVLTKKGKGYAPAERARDRGHATAKFDVVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  F +AL+ +A  D  +VA+ AAM  GTGLNLF  R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTAVFGKALVDQAARDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  GLKPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 SAALAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++A LP MVVMA +DEAEL HMVATAAA DD P  FRYPRG G+GVE+P    G  LE
Sbjct: 442 IAYLANLPGMVVMAAADEAELVHMVATAAAHDDGPIAFRYPRGEGVGVEMP--ELGKVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ +G RVALL +GT +     A+  L + G+  T+ADARF KPLD  LI +LA 
Sbjct: 500 IGKGRMIQKGARVALLSFGTRLTEVQKAAEALAARGITPTIADARFAKPLDRDLILNLAH 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SPAD  A AG+
Sbjct: 560 DHEALITIEEGAVGGFGSHVAQLLADEGVFDHGLKFRSMVLPDIFIDQSSPADMYAVAGM 619

Query: 537 TPSHIAATVFNILGQTR 553
               I A V ++LG  R
Sbjct: 620 NAPQIEAKVLDVLGIGR 636


>gi|418406285|ref|ZP_12979604.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           5A]
 gi|358006778|gb|EHJ99101.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium tumefaciens
           5A]
          Length = 639

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 393/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L      V+AVIGDG+
Sbjct: 94  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDQSDRKVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 205 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D  ++ + AAM  GTGL+     FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA SDEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  L++GKG
Sbjct: 442 ATLPGMVVMAASDEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 500 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD +++   P    A AGL  + 
Sbjct: 560 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDHWVEQAKPETMYANAGLDRAG 619

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 620 IVSTVFNALGQ 630


>gi|325292127|ref|YP_004277991.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
 gi|325059980|gb|ADY63671.1| Deoxyxylulose-5-phosphate synthase [Agrobacterium sp. H13-3]
          Length = 636

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 320/551 (58%), Positives = 393/551 (71%), Gaps = 14/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG GHSSTSISAGLGMAV   L      V+AVIGDG+
Sbjct: 91  IRTLRQEGGLSGFTRRAESEYDDFGAGHSSTSISAGLGMAVAAGLDQSDRKVIAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 151 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +   +ARG ++G   TLFEELG Y+IGP+DGH+ D L
Sbjct: 202 MGFRDFGKKLTAYLGKTIDRAITRAVTHARGYVTGG--TLFEELGFYHIGPIDGHSFDHL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ +  GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 260 LPVLRNVRDNQK-GPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKAKPNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAEALI EA +D  ++ + AAM  GTGL+     FP R FDVGIAEQHAVTFAAGL
Sbjct: 319 YTSVFAEALIQEATLDDKIIGVTAAMPNGTGLDKMAELFPARTFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G KPFCA+YS+F+QR YDQ+VHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 379 AADGYKPFCALYSTFLQRGYDQLVHDVAIQSLPVRFPIDRAGFVGADGPTHAGSFDTTFL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA SDEAEL HMV TAAA D+ P  FRYPRG G+GVE+P   +G  L++GKG
Sbjct: 439 ATLPGMVVMAASDEAELKHMVRTAAAYDEGPISFRYPRGEGVGVEMPA--RGEILQIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CLAA+  L++ GL  TVADARF KPLD  LIR LA  HEV
Sbjct: 497 RIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEV 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS+GGFG+HV+ F+A  GLLD   K R L LPD +++   P    A AGL  + 
Sbjct: 557 LVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDHWVEQAKPETMYANAGLDRAG 616

Query: 541 IAATVFNILGQ 551
           I +TVFN LGQ
Sbjct: 617 IVSTVFNALGQ 627


>gi|323447373|gb|EGB03297.1| hypothetical protein AURANDRAFT_59650 [Aureococcus anophagefferens]
          Length = 660

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 325/585 (55%), Positives = 414/585 (70%), Gaps = 36/585 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR-KNNVVAVIGDG 59
           M T+RQ DGLSGF KR+ESEYD FG GHSSTSISA LGM+VG+  KGR +NN +AVIGDG
Sbjct: 76  MGTLRQQDGLSGFQKRAESEYDAFGAGHSSTSISAALGMSVGKSQKGRAQNNCIAVIGDG 135

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNR 118
           A+T G A+EAMNNA YL + MI +LNDN QVSLPT T   G + P GALS+  SRL S++
Sbjct: 136 AITGGMAFEAMNNANYLQARMITVLNDNGQVSLPTGTPSAGGVIPSGALSAYTSRLISSK 195

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
           P  + R+VAKG++      +  + AK+DEYARG+++G   TLFEELG YYIGPVDGH+++
Sbjct: 196 PFADFRQVAKGISSLFPSEIQAINAKIDEYARGIVTGG--TLFEELGFYYIGPVDGHDLE 253

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LV ILE +++T +  PVL+H+ TEKG GY  A +A+DK HGVAKFD ATGKQFK +   
Sbjct: 254 NLVPILENLRDTPSNKPVLLHIKTEKGYGYAPAMQASDKMHGVAKFDVATGKQFKGAPPA 313

Query: 239 Q-------SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
                   S TT FA  L   AE D+DV+ I AAM GGTG+++F RRFP R +DVGIAEQ
Sbjct: 314 PGAPPKPASLTTIFANELCRLAEKDRDVIGITAAMPGGTGMDIFGRRFPKRTYDVGIAEQ 373

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAGLA EGLKPFC IYS+FMQR YDQ+VHDV +Q LPVRF +DRAGLVG DGPTH
Sbjct: 374 HAVTFAAGLAVEGLKPFCCIYSTFMQRGYDQLVHDVVIQDLPVRFILDRAGLVGNDGPTH 433

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV------- 404
            GSFD+T++ C+P +V+MAP++E +L +M+ATA AIDD+PSC RYPRG G G+       
Sbjct: 434 HGSFDLTYLGCMPGLVIMAPAEEVDLRNMIATAYAIDDKPSCVRYPRGTGYGLEKLNDLF 493

Query: 405 -----ELPPGNKGIPLEVGKGRILIEG--------ERVALLGYGTAVQSCLAASALLES- 450
                E+P   + +P  VGKGRI+ +G        ++VA+L  GT + +   A+  LE  
Sbjct: 494 DLGLTEVPEAGEVLP--VGKGRIIKDGVKGRPGANKKVAILSLGTRLAAAAEAAKELEGE 551

Query: 451 -NGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLL-DG 508
            + + +TVADARF KPLD  L+R LAK ++VLIT+EE S+ GFG +V+ FLA DG L DG
Sbjct: 552 YDDVAVTVADARFMKPLDIDLVRKLAKENDVLITIEENSVLGFGDYVLHFLALDGALDDG 611

Query: 509 TVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 553
            +K RP+VLPD +I+  +   Q   AGL   HI  T   +L + +
Sbjct: 612 NLKVRPMVLPDAFIETATQFQQYEAAGLNAKHIVGTAAKLLDRAK 656


>gi|304321304|ref|YP_003854947.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
           HTCC2503]
 gi|303300206|gb|ADM09805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Parvularcula bermudensis
           HTCC2503]
          Length = 638

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/548 (58%), Positives = 389/548 (70%), Gaps = 16/548 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR+ESEYD FG  H++TSISA LGMAV RDL+G  N VVAVIGDG+
Sbjct: 92  IRTLRQKDGLSGFTKRTESEYDPFGAAHAATSISAALGMAVARDLRGDVNRVVAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG     + VILNDN  +S+         PPVGA+S+ L+R+ S+   
Sbjct: 152 MSAGMAYEAMNNAGDRGKQLTVILNDN-DMSIA--------PPVGAMSAYLARVASSDKY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R +AK + K++   ++  A K +EY R  ++G   T+FEELG YY+GP+DGHN+D L
Sbjct: 203 HAFRNLAKQLAKRLPKGLYTSAEKFEEYGRAFVTGG--TMFEELGFYYVGPIDGHNLDHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +LE V+   T  PV++HVVT+KG+GY  AE AADKYHGVAKFD  +GKQ K      S
Sbjct: 261 VPVLENVREL-TDAPVMVHVVTQKGKGYAPAESAADKYHGVAKFDVVSGKQHKPKPAAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA  LI EAE D+ VV I AAM  GTG++ F+ RFP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTSVFAGQLIKEAERDERVVGITAAMPSGTGIDKFMERFPDRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+ PF AIYS+F+QRAYD VVHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 380 AAEGMVPFAAIYSTFLQRAYDSVVHDVALQNLPVRFALDRAGLVGADGATHAGAFDIAYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA  DEAEL HM  TAAA D+ P  FR+PRG G G+ELP   +   LE+G+G
Sbjct: 440 GCLPNMVLMAAGDEAELVHMTHTAAAFDEHPIAFRFPRGEGQGLELPLTPQ--LLEIGRG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VAL+ YG  +  CL A+ LL   GL  TV DARF KPLD  LI  +A  HEV
Sbjct: 498 RILREGAKVALIAYGGRLAECLKAADLLGMRGLSTTVVDARFAKPLDEDLIARVAADHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEGS+GGFG+ V+ FLA+ G LD  +K R L LPD Y D   PAD  A+A L   +
Sbjct: 558 VLTVEEGSMGGFGAAVLHFLARIGQLDKGLKIRTLTLPDTYQDQAKPADMYAEAKLQAEN 617

Query: 541 I--AATVF 546
           I  AA VF
Sbjct: 618 IADAAIVF 625


>gi|258542580|ref|YP_003188013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|384042501|ref|YP_005481245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
 gi|384051018|ref|YP_005478081.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|384054126|ref|YP_005487220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|384057360|ref|YP_005490027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|384060001|ref|YP_005499129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|384063293|ref|YP_005483935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|384119303|ref|YP_005501927.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256633658|dbj|BAH99633.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636717|dbj|BAI02686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639770|dbj|BAI05732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642826|dbj|BAI08781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645881|dbj|BAI11829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648934|dbj|BAI14875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651921|dbj|BAI17855.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654978|dbj|BAI20905.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 662

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 323/567 (56%), Positives = 403/567 (71%), Gaps = 32/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+R+ES+YD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 103 IRTLRQPGGLSGFTRRAESKYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 162

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G     +IVILNDN ++S+         PPVGA+S+ L
Sbjct: 163 VIGDGSISAGMAYEAMNNAAVAGPGAERLIVILNDN-EMSI--------APPVGAMSNYL 213

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A    K++  P+   A K DEYARGMI+G   TLFEELG YY+GP
Sbjct: 214 SRLMSSRKFMGLRELAGKFVKKLPAPVERTARKADEYARGMITGG--TLFEELGFYYVGP 271

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH++  LV+IL  +++T   GP+++HV+TEKG GY  AEKA DKYH VAKF+  TG+Q
Sbjct: 272 VDGHDLPQLVSILRNLRDTDN-GPIMLHVITEKGHGYQPAEKAGDKYHAVAKFNVVTGEQ 330

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  A   SYT+ F+  L   A  D  + AI AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 331 KKGPAGPPSYTSVFSRELTRRAATDNKIAAITAAMPSGTGLDAFAKAYPDRFFDVGIAEQ 390

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 391 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 450

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLP M +MAPSDE EL HM ATAA  D+ P   RYPRG+G+G++LP   +
Sbjct: 451 AGSFDIAYLGCLPGMTIMAPSDELELLHMTATAALFDEGPIALRYPRGSGLGLDLP--AE 508

Query: 412 GIPLEVGKGRILIE--GER------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G PLE+GKGRI+ E  G+       VA+L  G  +  CL A+ +L ++GL  TVADARF 
Sbjct: 509 GTPLEIGKGRIIREMGGQSGPEKGGVAILSLGPRLAECLKAADMLAAHGLPPTVADARFA 568

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP D  L+ +LA++H VLIT+EEGS GGFGS V   LA+ GLLD  V++RPL LPDR+ID
Sbjct: 569 KPFDTELVENLARNHAVLITIEEGSEGGFGSLVGHHLARTGLLD-NVRFRPLTLPDRFID 627

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H + A Q A+AGL+  HI  T  + LG
Sbjct: 628 HNTQAAQYAEAGLSAPHIVGTALSALG 654


>gi|304393478|ref|ZP_07375406.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
 gi|303294485|gb|EFL88857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ahrensia sp. R2A130]
          Length = 637

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 315/555 (56%), Positives = 393/555 (70%), Gaps = 13/555 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKR+ESEYD FG  HSSTSISAGLGMA    L G   NVV+VIGDG+
Sbjct: 92  IRTLRTETGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAEASKLAGVHRNVVSVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEAMNNAG +D+  IVILNDN  +S+         PP GA+S  L+RL S +  
Sbjct: 152 ITAGMAYEAMNNAGGIDARQIVILNDN-DMSIA--------PPTGAMSHYLARLVSGKTY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK + +++   + + A K +EY R + +  G T+FEELG YY+GP+DGH++  L
Sbjct: 203 RSLRETAKQLNEKLPKFIADKARKAEEYTRNVFNEQG-TMFEELGFYYVGPIDGHDLSVL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++ K+ GP+L+HV+TEKG+GY  AE A DK H VAKF+  TG+Q KS     S
Sbjct: 262 LPVLRNVRDAKS-GPILVHVITEKGKGYGPAEAAGDKLHAVAKFNVVTGEQSKSIPNAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F ++L+ EAE D  +V I AAM GGTG+++F   FP R +DVGIAEQHAVTFAAG+
Sbjct: 321 YTKVFGQSLVQEAENDPKIVGISAAMPGGTGIDIFGEAFPERTYDVGIAEQHAVTFAAGM 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCAIYS+F+QR YDQVVHDV +Q LPVRF +DRAG VGADG TH GSFD+ ++
Sbjct: 381 ASEGYKPFCAIYSTFLQRGYDQVVHDVSIQNLPVRFPIDRAGFVGADGATHAGSFDIAYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLP   VMA +DEAEL HMVATA A DD P  FRYPRG G+GV+LP   +G  LE+GKG
Sbjct: 441 ACLPGFTVMAAADEAELKHMVATAVAYDDGPLSFRYPRGEGVGVDLP--ERGSVLEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI  EG ++ALL +G+    C+AA+  LE  GL  TVADARF KPLD  LI  LA++HEV
Sbjct: 499 RITKEGTKIALLSFGSRHADCMAAAEELEEYGLSTTVADARFAKPLDTDLIERLARNHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFG+ V+  LA  GLLD  +K R + +PD Y+D  SPA  +  AGL  + 
Sbjct: 559 LITVEEGSVGGFGAMVLHHLAGSGLLDNGLKIRTMTMPDVYLDQMSPARMIEVAGLDQAG 618

Query: 541 IAATVFNILGQTREA 555
           I  TVF  LG  ++A
Sbjct: 619 IVKTVFAALGTEQDA 633


>gi|258541495|ref|YP_003186928.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|384041416|ref|YP_005480160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
 gi|384049931|ref|YP_005476994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|384053041|ref|YP_005486135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|384056273|ref|YP_005488940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|384058914|ref|YP_005498042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|384062208|ref|YP_005482850.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|384118284|ref|YP_005500908.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256632573|dbj|BAH98548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635630|dbj|BAI01599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638685|dbj|BAI04647.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256641739|dbj|BAI07694.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256644794|dbj|BAI10742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256647849|dbj|BAI13790.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256650902|dbj|BAI16836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256653893|dbj|BAI19820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 675

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 323/567 (56%), Positives = 403/567 (71%), Gaps = 32/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+R+ES+YD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 106 IRTLRQPGGLSGFTRRAESKYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 165

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G     +IVILNDN ++S+         PPVGA+S+ L
Sbjct: 166 VIGDGSISAGMAYEAMNNAAVAGPGAERLIVILNDN-EMSI--------APPVGAMSNYL 216

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A    K++  P+   A K DEYARGMI+G   TLFEELG YY+GP
Sbjct: 217 SRLMSSRKFMGLRELAGKFVKKLPAPVERTARKADEYARGMITGG--TLFEELGFYYVGP 274

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH++  LV+IL  +++T   GP+++HV+TEKG GY  AEKA DKYH VAKF+  TG+Q
Sbjct: 275 VDGHDLPQLVSILRNLRDTDN-GPIMLHVITEKGHGYQPAEKAGDKYHAVAKFNVVTGEQ 333

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  A   SYT+ F+  L   A  D  + AI AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 334 KKGPAGPPSYTSVFSRELTRRAATDNKIAAITAAMPSGTGLDAFAKAYPDRFFDVGIAEQ 393

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 394 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 453

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLP M +MAPSDE EL HM ATAA  D+ P   RYPRG+G+G++LP   +
Sbjct: 454 AGSFDIAYLGCLPGMTIMAPSDELELLHMTATAALFDEGPIALRYPRGSGLGLDLP--AE 511

Query: 412 GIPLEVGKGRILIE--GER------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G PLE+GKGRI+ E  G+       VA+L  G  +  CL A+ +L ++GL  TVADARF 
Sbjct: 512 GTPLEIGKGRIIREMGGQSGPEKGGVAILSLGPRLAECLKAADMLAAHGLPPTVADARFA 571

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP D  L+ +LA++H VLIT+EEGS GGFGS V   LA+ GLLD  V++RPL LPDR+ID
Sbjct: 572 KPFDTELVENLARNHAVLITIEEGSEGGFGSLVGHHLARTGLLD-NVRFRPLTLPDRFID 630

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H + A Q A+AGL+  HI  T  + LG
Sbjct: 631 HNTQAAQYAEAGLSAPHIVGTALSALG 657


>gi|222085096|ref|YP_002543626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
           K84]
 gi|398382394|ref|ZP_10540482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
 gi|254782056|sp|B9JAL7.1|DXS_AGRRK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221722544|gb|ACM25700.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium radiobacter
           K84]
 gi|397717559|gb|EJK78175.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium sp. AP16]
          Length = 638

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 321/552 (58%), Positives = 393/552 (71%), Gaps = 14/552 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  G+SGFT+R+ESEYD FG  HSSTSISAGLGMAV  DL      V+AVIGDGA
Sbjct: 94  IRTLRQEGGISGFTRRAESEYDPFGAAHSSTSISAGLGMAVAADLDKTDRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R++ K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGFRDLGKKLTAYLGKNVDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K      S
Sbjct: 263 LPVLRNVRD-NAQGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQAKVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+ EA  D  +V I AAM  GTGL+     FP RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFADALVQEATFDDKIVGITAAMPSGTGLDKLQEVFPKRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD TF+
Sbjct: 382 AAEGFKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTTFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D  P  FRYPRG G+G+E+P   +G  LE+GKG
Sbjct: 442 ATLPGFVVMAAADEAELKHMVRTAAAYDLGPISFRYPRGEGVGIEMP--ERGQILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VALL +GT +   LAA+  L++ GL  TVADARF KPLDH LIR LA  HEV
Sbjct: 500 RIVKQGSKVALLSFGTRLADSLAAAEDLDAAGLPTTVADARFAKPLDHDLIRQLASHHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGS V+QFLA +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 LITIEEGSVGGFGSQVMQFLASEGLLDNGLKIRTLVMPDIWVEQAKPEVMNAMAGLDRAG 619

Query: 541 IAATVFNILGQT 552
           I  TVF  LG++
Sbjct: 620 IVQTVFKALGRS 631


>gi|126727248|ref|ZP_01743084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703457|gb|EBA02554.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2150]
          Length = 646

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 314/556 (56%), Positives = 392/556 (70%), Gaps = 18/556 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+RQ  GLSGFTKRSES +D FG  HSSTSISA LG A  RDL G       + +AVI
Sbjct: 98  IRTLRQQGGLSGFTKRSESPFDPFGAAHSSTSISAALGFATARDLGGAPEHGIGDAIAVI 157

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AGQAYEAMNNAG+L   + VILNDN ++S+         PPVGA+SS LSRL +
Sbjct: 158 GDGAMSAGQAYEAMNNAGHLGKRLFVILNDN-EMSI--------APPVGAMSSYLSRLYA 208

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG    +  P  E A +  E  +GM  G   TLFEELG  Y+GP+DGH+
Sbjct: 209 GDPFQELKAAAKGAVSLLPEPFQEGARRAKEMLKGMTVGG--TLFEELGFSYLGPIDGHD 266

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK T+ TGP+LIHV+T+KG+GY  AE A DK HGV+KFD  TGKQ K+ +
Sbjct: 267 LDQLLPVLRTVK-TRATGPILIHVITQKGKGYAPAEAARDKGHGVSKFDVVTGKQKKTPS 325

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA+AL+ EA  D  + AI AAM  GTGLNLF  +FP RCFDVGIAEQHAVTF
Sbjct: 326 NAPSYTGVFAKALMDEASRDDKITAITAAMPDGTGLNLFAEKFPKRCFDVGIAEQHAVTF 385

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA  A  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 386 AAAQAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 445

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + F+A LP+ VVMA +DEAEL HMVATA A DD P  FR+PRG G+GV LP   +G P+E
Sbjct: 446 IGFLANLPDFVVMAAADEAELVHMVATATAYDDGPIAFRFPRGEGVGVTLP--ERGEPIE 503

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ +G RVA+L +GT +     A   L + G+  T+ADARF KPLD  +I  LA 
Sbjct: 504 IGKGRMIAKGARVAILSFGTRLSEVQKAVEALSARGISPTIADARFAKPLDREMILDLAA 563

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LIT+EEG +GGFGSHV Q LA +G+ D  +++R +VLPD +IDH +P D    A +
Sbjct: 564 NHEALITIEEGVVGGFGSHVAQLLADEGVFDNGLRFRSMVLPDTFIDHANPKDMYDDAKM 623

Query: 537 TPSHIAATVFNILGQT 552
             + I A V ++LG T
Sbjct: 624 NAADIEAKVLDVLGVT 639


>gi|254512770|ref|ZP_05124836.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           KLH11]
 gi|221532769|gb|EEE35764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           KLH11]
          Length = 643

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/554 (56%), Positives = 391/554 (70%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG +V RDL G       + +AVI
Sbjct: 95  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFSVARDLGGVTPEGLGDAIAVI 154

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALS+ LSR+ +
Sbjct: 155 GDGSMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSIA--------PPVGALSTYLSRIYA 205

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P  +L+  AKG    +  P  E A +  E  +GM    G TLFEELG  Y+GP+DGH+
Sbjct: 206 EEPFHDLKAAAKGAVSLLPEPFREGAKRAKEMLKGM--AVGGTLFEELGFSYLGPIDGHD 263

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  K TGP+LIHV+T+KG+GY  AE+A DK H  A+FD  TG+Q K+ +
Sbjct: 264 LDQLLPVLRAVK-AKATGPILIHVLTKKGKGYAPAEQARDKGHATARFDVVTGEQKKAPS 322

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F +AL+  A  D  +VA+ AAM  GTGLNLF  R+P+RCFDV IAEQH VTF
Sbjct: 323 NAPSYTSVFGKALVEAAARDDKIVAVTAAMPDGTGLNLFAERYPSRCFDVAIAEQHGVTF 382

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 383 SAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 442

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++A LP MVVMA +DEAEL HMVATAAA DD P  FRYPRG G+GV+LP  ++   LE
Sbjct: 443 IAYLANLPGMVVMAAADEAELIHMVATAAAHDDGPIAFRYPRGEGVGVDLP--DQAEVLE 500

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++  G RVALL +GT +     A+  L + G+  T+ADARF KPLD  LI  LA 
Sbjct: 501 IGKGRMIQTGARVALLSFGTRLAEVRKAAESLTARGITPTIADARFAKPLDRDLILDLAA 560

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LIT+EEG+IGGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SPAD  A AG+
Sbjct: 561 NHEALITIEEGAIGGFGSHVAQLLADEGVFDHGLKYRSMVLPDIFIDQSSPADMYAVAGM 620

Query: 537 TPSHIAATVFNILG 550
               I A V  +LG
Sbjct: 621 NAEQIEAKVLAVLG 634


>gi|260425522|ref|ZP_05779502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
 gi|260423462|gb|EEX16712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. SE45]
          Length = 641

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 318/554 (57%), Positives = 387/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+R  DGLSGFTKRSES +D FG GHSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPFDPFGAGHSSTSISAALGFAVARDLGGVCDTGSGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG AYEAMNNAG+L   +IVILNDN ++S+         PP GA+SS LSRL +
Sbjct: 154 GDGAMSAGMAYEAMNNAGHLGKRLIVILNDN-EMSIA--------PPTGAMSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++L+  AKG    + GP  E A +  E  + M  G   TLFEELG  YIGP+DGH+
Sbjct: 205 EAPFQDLKAAAKGAVSLLPGPFREGAKRAKEVLKTMTVGG--TLFEELGFDYIGPLDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ IL  VK  + TGP+L+HV+T+KG+GY  AE AAD+ H  AKFD  TG+Q KS +
Sbjct: 263 LHQLLPILRTVK-ARATGPILLHVLTKKGKGYAPAEGAADRGHARAKFDLVTGEQKKSPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA  L   A  D  + A+ AAM  GTGL+L   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPSYTKIFARELTRLAAEDSRICAVTAAMPDGTGLDLMAERYPSRVFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  GLKPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 382 SAGLAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + FMA LP MVVMA +DEAEL HMVATAAA D+ P  FRYPRG G GVE+P   KG PLE
Sbjct: 442 IAFMANLPGMVVMAAADEAELMHMVATAAAHDEGPIAFRYPRGEGSGVEMP--EKGEPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G+GR++ EG R+A+L +GT +   + A   L + G+  TVADARF KPLD  LI  LA 
Sbjct: 500 IGRGRLVREGARLAILSFGTRLSEVMKACERLSARGISPTVADARFAKPLDRELILKLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEGS+GGFGSHVVQ L+++G LD  +K+R +VLPD +IDH SP D    AGL
Sbjct: 560 EHEALITIEEGSVGGFGSHVVQLLSEEGALDHGLKFRSMVLPDTFIDHASPNDMYEAAGL 619

Query: 537 TPSHIAATVFNILG 550
              HI   V   LG
Sbjct: 620 DARHIEEKVLTTLG 633


>gi|344923787|ref|ZP_08777248.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Odyssella
           thessalonicensis L13]
          Length = 637

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/541 (57%), Positives = 389/541 (71%), Gaps = 13/541 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G SGFTKRSES YD FG  H+ TSISA LG AV  ++  + ++ +AVIGDG+
Sbjct: 91  MSKLRQKGGPSGFTKRSESIYDPFGAAHAGTSISAALGFAVASEMNKKHHHSIAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M++G AYEAMNNAG L S ++VILNDN  +S+         PPVGA+S   SRL S+RP 
Sbjct: 151 MSSGMAYEAMNNAGALKSRLVVILNDN-DMSIA--------PPVGAMSHYFSRLISSRPY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + LR +AK V   +  P+   A +V+EYARG+++G   T FEE+G +Y+GP+DGH++D L
Sbjct: 202 QSLRSMAKEVASHLPKPLETAARRVEEYARGIVAGG--TWFEEMGFFYVGPIDGHDLDHL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE +++ K  GPVLIH+VT+KGRGY  AE AADKYHGV KFD ATG+Q K+   + S
Sbjct: 260 IPVLENIRDRKEDGPVLIHIVTQKGRGYAPAEAAADKYHGVVKFDVATGQQQKTEVSSPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE L   A  D  +VAI AAM  GTGL+LF R FP RCFDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFAETLTELARQDDKIVAITAAMPTGTGLDLFAREFPGRCFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKPF AIYS+F+QR +DQVVHDV LQ LPVRFA+DRAG VGADG TH GS+D+ F+
Sbjct: 380 ACDGLKPFTAIYSTFLQRGFDQVVHDVMLQNLPVRFALDRAGFVGADGATHAGSYDLAFL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLP M++MAPSDE EL H V TA AI+D P  FRYPRGNG+G++L     G  LE+GKG
Sbjct: 440 GCLPQMIIMAPSDELELKHAVTTAHAIEDGPCAFRYPRGNGVGLDLR--QPGKILEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG ++A+L  G  +Q  L A+ALL   GL +TVADARF KP+D  L+  LA+ HEV
Sbjct: 498 RIIQEGNQIAILSLGCRLQESLKAAALLAELGLSVTVADARFAKPVDMNLVIQLAQHHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE GSIGGF + V   L Q+ LLD  +K+R L +PDR  DH +P  Q  +AGLT  H
Sbjct: 558 LLTVEAGSIGGFATQVTDVLVQNWLLDKGLKFRTLYMPDRLFDHDTPNSQYEEAGLTAHH 617

Query: 541 I 541
           I
Sbjct: 618 I 618


>gi|347757576|ref|YP_004865138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
           ARL-13]
 gi|347590094|gb|AEP09136.1| 1-deoxy-D-xylulose-5-phosphate synthase [Micavibrio aeruginosavorus
           ARL-13]
          Length = 629

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 316/541 (58%), Positives = 382/541 (70%), Gaps = 13/541 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISAGLGMAV RD  G+ N+V+ VIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGLGMAVARDQLGKDNHVICVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNAG   S +IVILNDN  +S+         PPVGALS  L+RL S++  
Sbjct: 154 MTAGMAYEAMNNAGDAKSRLIVILNDN-DMSIA--------PPVGALSKHLTRLVSSKRY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + RE  K VT+ +  P+     + +E AR  + G+GS LFEE+G YYIGPVDGHN+D L
Sbjct: 205 MQARETGKKVTEILPPPLRHAVKRAEESARTAM-GTGS-LFEEMGFYYIGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + I+  +++    GPVLIH +T+KG+GY  AE +ADK HGV KFD  TG Q KS     +
Sbjct: 263 LPIMRNLRDGAHEGPVLIHAITKKGKGYAPAESSADKMHGVVKFDVVTGAQHKSKPSAPA 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EA  D  +VAI  AM  GTGL+LF R FP R FDVGIAEQHAVTFAAG+
Sbjct: 323 YTKVFAQSLIEEARHDSRIVAITGAMPSGTGLDLFEREFPDRMFDVGIAEQHAVTFAAGM 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKPFCAIYS+F+QRAYDQVVHDV +Q LPVRFAMDRAGLVGADG TH G+FDV +M
Sbjct: 383 ATEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAMDRAGLVGADGSTHAGAFDVAYM 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPNMV+MA  DE EL HMVAT AA D  P   RYPRG G+G++LP   +G  LE+GKG
Sbjct: 443 GCLPNMVLMAAGDEVELMHMVATMAAYDAGPIGLRYPRGEGMGIDLPA--RGFVLEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L YGT +   L A+  L   G+  TVADARF KPLD ALI  LA  H  
Sbjct: 501 RVVREGNDVAILSYGTRLGEALKAADALAERGISATVADARFAKPLDTALITQLANHHSK 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGSIGGFGS+ ++++   GLLDG  + + + LPD + D  +P  Q  +AGL    
Sbjct: 561 LITIEEGSIGGFGSYTLEYMNDAGLLDGRCRVKTMHLPDLFQDQDTPDKQYDEAGLNAKQ 620

Query: 541 I 541
           I
Sbjct: 621 I 621


>gi|384261859|ref|YP_005417045.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
           photometricum DSM 122]
 gi|378402959|emb|CCG08075.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodospirillum
           photometricum DSM 122]
          Length = 640

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 314/551 (56%), Positives = 389/551 (70%), Gaps = 12/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  G+SGFT R ES YD FG GHSSTSISAGLGMA   +L G    V+AVIGDG+
Sbjct: 94  MRSLRQGGGISGFTLREESPYDPFGAGHSSTSISAGLGMAAAAELLGDDRLVIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG + S +IVILNDN              PPVGA+S+ LSRL S+   
Sbjct: 154 MSAGMAYEAMNNAGAMKSRLIVILNDNDM---------SIAPPVGAMSAYLSRLLSSNSW 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R++AK V   +  P+   A + +EYAR +++G G+TLFEELG YY+GP+DGH +D L
Sbjct: 205 LSIRDLAKEVASHLPPPLERTARRAEEYARSIMTG-GNTLFEELGFYYVGPIDGHRMDHL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L  V++ +  GPVLIHVVT KG+GY  AE A DKYHGV++F+  TG Q K   +  S
Sbjct: 264 VPVLRNVRDGRRDGPVLIHVVTRKGKGYAPAEAAPDKYHGVSRFNIVTGVQDKGKPQAPS 323

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F ++L+ EA  D  +VAI AAM  GTGL+ F   FP R +DVGIAEQHAVTFAAGL
Sbjct: 324 YTNVFGKSLLTEAIRDPRIVAITAAMPSGTGLDKFAETFPDRTYDVGIAEQHAVTFAAGL 383

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL+PF A+YS+F+QRA+DQVVHDV LQ LPVR A+DRAG VGADG TH G FD+ F+
Sbjct: 384 ACEGLRPFVAMYSTFLQRAFDQVVHDVALQNLPVRIAVDRAGFVGADGATHGGVFDMAFL 443

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+M  +DEAEL  MVATAA  DD P+  RYPRG G+GVE+P   +  PL +GKG
Sbjct: 444 GCIPNLVIMCAADEAELARMVATAALYDDGPTVLRYPRGEGVGVEIPDAPE--PLAIGKG 501

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+ VALL  GT +  CLAA+  L + GL  TVADARF KPLD  LI  LA++HEV
Sbjct: 502 RVVREGKGVALLSIGTRLHDCLAAAEQLAARGLSPTVADARFAKPLDWDLIEGLARTHEV 561

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+ VEEGSIGGFGS VV  LA  GLLD  +K R L +PDR+ +H +P  Q A+AG+  S 
Sbjct: 562 LVLVEEGSIGGFGSLVVTGLANRGLLDNGLKTRILCIPDRFFEHDTPEAQCAKAGIDASA 621

Query: 541 IAATVFNILGQ 551
           I  TV   LG+
Sbjct: 622 ILDTVLAALGR 632


>gi|406706618|ref|YP_006756971.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB5]
 gi|406652394|gb|AFS47794.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB5]
          Length = 637

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/549 (53%), Positives = 391/549 (71%), Gaps = 13/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  G+SGFTKR+ESEYD FG  HSSTSISAGLG+A    L  + + V+AVIGDGA
Sbjct: 92  IRTLRQGGGISGFTKRTESEYDPFGAAHSSTSISAGLGIAEANKLSNKNDEVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG   + MIVILNDN ++S+          PVGA+S+ L+++ S +  
Sbjct: 152 ISAGMAYEAMNNAGTSKAKMIVILNDN-EMSIA--------KPVGAMSTYLAKIFSGKIY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K +T          A K ++  R  ++G   TLF  LG YYIGP+DGH++  L
Sbjct: 203 FSLRETIKLITSAFSKRFSAKAGKAEDLFRSAVTGG--TLFHSLGFYYIGPIDGHDLTTL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+ VK +K  GP+LIH+ T+KG+GY +AEKA D YHGV+KF+  TG+Q K+SA   S
Sbjct: 261 VPILKNVKQSKHQGPILIHIKTQKGKGYSFAEKANDHYHGVSKFNVGTGEQVKASASAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ LI  A+ D  +VA+ AAM GGTGL++F + FP+R +DVGIAEQHAVTFAAGL
Sbjct: 321 YTKVFAKTLIEHAKKDSKIVAVTAAMPGGTGLDVFGKEFPSRMYDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A E  KP+ AIYS+F+QRAYDQ+VHDV +Q LPVRFA+DRAGLVGADGPTH GSFD+T++
Sbjct: 381 ATENYKPYAAIYSTFLQRAYDQIVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDITYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN ++MA SDEAEL  M+ T+  I+D+P  FRYPRG G+G ELPP ++ I  E+GKG
Sbjct: 441 STLPNFIIMAASDEAELVRMINTSVDINDKPCAFRYPRGTGLGTELPPISEKI--EIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG+++A+L +GT +   L AS  L+  G+ +TV DARF KPLD  LI  LA +HE 
Sbjct: 499 RIIQEGKKLAVLNFGTRLSEVLKASENLKKKGINITVIDARFAKPLDENLIWQLATTHES 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++T+EEG+IGGFGSHVV FL +  LLD  +K+R ++LPD +ID   P    ++A L  S 
Sbjct: 559 ILTIEEGAIGGFGSHVVNFLTKKNLLDSNLKFRSMILPDLFIDQDKPEIMYSEALLDSSS 618

Query: 541 IAATVFNIL 549
           I   + +++
Sbjct: 619 IEEKIMDLI 627


>gi|440225750|ref|YP_007332841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
           899]
 gi|440037261|gb|AGB70295.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhizobium tropici CIAT
           899]
          Length = 638

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 319/553 (57%), Positives = 393/553 (71%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV  +L      V+AVIGDGA
Sbjct: 94  IRTLRQENGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAAELDNADRRVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAYEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ + L
Sbjct: 205 MGFRDFGKKLTAYLGKKVDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K      S
Sbjct: 263 LPVLRNVRDN-AQGPVLIHVVTQKGKGYAPAEAAADKYHGVNKFDVITGAQTKVKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+ EA +D  +V I AAM  GTGL+     FP RCFDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFADALVQEATLDDKIVGITAAMPNGTGLDKLQEIFPKRCFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF A+YS+F+QRAYDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFAALYSTFLQRAYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D  P  FRYPRG G+GV+LP   +G  LE+GKG
Sbjct: 442 ATLPGFVVMAAADEAELKHMVRTAAAYDLGPISFRYPRGEGVGVDLP--ERGQILEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G +VALL +GT +   LAA+  L++ GL  TVADARF KPLDH LIR LA  HE+
Sbjct: 500 RVIKQGTKVALLSFGTRLADSLAAAEDLDAAGLSTTVADARFAKPLDHDLIRQLAAHHEI 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEGS+GGFGS V+QFLA +GLLD  +K R LV+PD +++   P    A AGL  + 
Sbjct: 560 LITIEEGSVGGFGSQVMQFLANEGLLDSGLKIRSLVMPDIWMEQAKPEAMNAMAGLDRAG 619

Query: 541 IAATVFNILGQTR 553
           I  TVF  LG+ R
Sbjct: 620 IVQTVFRALGRGR 632


>gi|399060904|ref|ZP_10745823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
 gi|398036847|gb|EJL30055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. AP12]
          Length = 640

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 319/549 (58%), Positives = 389/549 (70%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FGT HSSTSISA LG A+   +KG     +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGTAHSSTSISAALGFAIANKIKGTPGRGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+RL S+   
Sbjct: 154 MSAGMAYEAMNNAREAGNRLVVILNDN-DMSI--------APPVGGLSAYLARLVSSGQF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE+A+   +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGH++D L
Sbjct: 205 LGLRELARKFARRLPRPLHVAAKKTDEFARGM--AMGGTLFEELGFYYVGPIDGHDLDAL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +LE V++    GP+L+HVVT+KG+GY  AE AADKYHGV KFD  TG+Q K+ A   S
Sbjct: 263 VPVLENVRDAGE-GPILVHVVTQKGKGYAPAENAADKYHGVQKFDVITGEQAKAPAGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL AEAE D  + AI AAM  GTGL+ F  +FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFAKALTAEAERDPTICAITAAMPSGTGLDKFSAQFPERSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DE EL HMV TAA  D  P  FRYPRGNG+G+ELP   +   L +GKG
Sbjct: 442 ATLPNMVVMAAADEVELVHMVHTAALHDAGPIAFRYPRGNGVGLELPATPE--QLAIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VA+L  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  SHEV
Sbjct: 500 RVVREGSKVAILSLGTRLGEALKAADQLEARGLSTTVADLRFAKPLDTDLIRRLMLSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEGSIGG G+HV+   + +GL D  +K R + LPD + DH  P  Q  +AGL    
Sbjct: 560 IVTVEEGSIGGLGAHVLTMASDEGLTDAGLKIRTMRLPDVFQDHDKPETQYDEAGLNAPQ 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVDTVLKAL 628


>gi|357032439|ref|ZP_09094377.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
           G707]
 gi|356413976|gb|EHH67625.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter morbifer
           G707]
          Length = 660

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 320/566 (56%), Positives = 399/566 (70%), Gaps = 30/566 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN------NVVA 54
           + T+RQ +GLSGFT+R ESEYD FG  HSSTSISAGLGMAV   L+  ++      NV+A
Sbjct: 101 IRTLRQPNGLSGFTRRVESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYHERNVIA 160

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G   + +IV+LNDN ++S+         PPVG++S  L
Sbjct: 161 VIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDN-EMSI--------APPVGSMSDYL 211

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V K++ G +   A + +EYARGMI+G   TLFEELG YY+GP
Sbjct: 212 SRLMSSRQFFSLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGG--TLFEELGFYYVGP 269

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           V+GH++  LV IL  +++    GP+L+HV+TEKGRGY  AE A DKYH V+KF+  TG+Q
Sbjct: 270 VNGHDMSQLVPILRNLRDADDQGPILLHVITEKGRGYKPAEAAGDKYHAVSKFNVVTGEQ 329

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+ A   SYT+ F+  L+  AE D  ++ I AAM  GTGL  F +  P R FDVGIAEQ
Sbjct: 330 KKAPAGPPSYTSVFSRELMRRAETDDKLITITAAMPSGTGLGAFAKAHPDRFFDVGIAEQ 389

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 390 HAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATH 449

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLPNMVVMAPSDE EL H  ATA   D  P  FRYPRG+GIG++LP   K
Sbjct: 450 AGSFDLNYLCCLPNMVVMAPSDEVELLHATATACEHDSGPIAFRYPRGSGIGLDLP--EK 507

Query: 412 GIPLEVGKGRILIE-----GER--VALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 464
           G  LE+GKGRI+ E     GER  VA+L  G  +   L A+  L + G+ +TVADARF K
Sbjct: 508 GEVLEIGKGRIVREARQAPGERGGVAILSLGPRLHESLKAADQLAAQGIPVTVADARFAK 567

Query: 465 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           P+DH L+  LA+ HEV IT+EEG+ GGF S VV  LA++GLLD TVK+RP+  PDRYIDH
Sbjct: 568 PIDHKLVDDLARKHEVFITLEEGAAGGFSSQVVSHLAKNGLLD-TVKFRPMAFPDRYIDH 626

Query: 525 GSPADQLAQAGLTPSHIAATVFNILG 550
            +   Q  +AGLT  HI  T  + LG
Sbjct: 627 NTQDAQYDEAGLTAPHIVHTAASALG 652


>gi|89052579|ref|YP_508030.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
 gi|118595482|sp|Q28WA7.1|DXS1_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|88862128|gb|ABD53005.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
          Length = 639

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 311/554 (56%), Positives = 393/554 (70%), Gaps = 20/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           M T+RQ DGLSGFTKRSES +D FG  HSSTSISA LG AV RDL G  +    + +AVI
Sbjct: 94  MLTIRQKDGLSGFTKRSESPFDPFGAAHSSTSISAALGFAVARDLGGDSDTGHGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+ G A+EAMNNAG+L   +IVILNDN ++S+         PP GALSS LSRL +
Sbjct: 154 GDGAMSGGMAFEAMNNAGHLGKRLIVILNDN-EMSIA--------PPTGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +E +  AKG    +  P  E A +  E  +   +  G TLFEELG  Y+GP+DGH+
Sbjct: 205 GAPFQEFKAAAKGAVSLLPEPFQEGARRAKELLKS--ATVGGTLFEELGFSYVGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+++L  VK  +  GP+LIH +T+KG+GY  +E  AD+ H  AKF+ ATG+Q K+ +
Sbjct: 263 MESLLSVLRTVK-ARADGPILIHAITKKGKGY--SEHRADRGHATAKFNIATGEQVKAPS 319

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA++LIAEAE D  VVA+ AAM  GTGL+LF  RFP+RCFDVGIAEQH VTF
Sbjct: 320 NAPSYTKVFAQSLIAEAEDDPKVVAVTAAMPDGTGLDLFAERFPSRCFDVGIAEQHGVTF 379

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+A  GLKPF AIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GS+D
Sbjct: 380 AAGMAAGGLKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGCTHAGSYD 439

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           ++++A LP  VVMA +DEAEL HMV TA  IDDRPS FR+PRG G+GV++P  ++G  LE
Sbjct: 440 ISYLANLPGFVVMAAADEAELRHMVRTALEIDDRPSAFRFPRGEGMGVDMP--DRGTALE 497

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ EG RVA+L +GT ++    A+  L   G+  T+ADARF KPLD ALI  LA+
Sbjct: 498 IGKGRMISEGNRVAILNFGTRLKEVQEAAETLSQRGITPTIADARFAKPLDEALILQLAR 557

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LITVEEG++GGFGSHV   LA++ + D  +K+R +VLPD +ID  SP D  A AG+
Sbjct: 558 HHEALITVEEGAVGGFGSHVAHLLAENAVFDTGIKYRSMVLPDIFIDQASPKDMYAVAGM 617

Query: 537 TPSHIAATVFNILG 550
               I A V   LG
Sbjct: 618 NAEDIVAKVLTTLG 631


>gi|222147754|ref|YP_002548711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
 gi|254782057|sp|B9JSL2.1|DXS_AGRVS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221734742|gb|ACM35705.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium vitis S4]
          Length = 639

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 318/556 (57%), Positives = 391/556 (70%), Gaps = 16/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLGMAV  +L      V+AVIGDGA
Sbjct: 94  IRTLRQEHGLSGFTKRAESEYDPFGAAHSSTSISAGLGMAVAAELGQTDRKVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 154 MSAGMAFEALNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE+ K +T  +G  +     +  E+ARG ++G   T+FEE+G Y+IGP+DGH+ D L
Sbjct: 205 MGMREIGKKLTAYLGKNIDRAITRAVEHARGYVTGG--TMFEEMGFYHIGPIDGHSFDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V++    GPVLIHVVT+KG+GY  AE AADKYHGV  FD  TG Q K+     S
Sbjct: 263 LPVLRNVRDN-AKGPVLIHVVTQKGKGYAPAEAAADKYHGVNTFDVITGTQAKAKPNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+ EA +D  +V I AAM  GTGL+     FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTAVFADALVEEARLDDKIVGITAAMPSGTGLDKLQNLFPERTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPFCA+YS+F+QR YDQVVHDV +Q LPVRF +DRAG VGADGPTH GSFD  F+
Sbjct: 382 AAEGYKPFCALYSTFLQRGYDQVVHDVAIQGLPVRFPIDRAGFVGADGPTHAGSFDTGFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAAA D+ P  FRYPRG G+GV++P   +G  L +GKG
Sbjct: 442 ASLPGFVVMAAADEAELKHMVRTAAAYDEGPISFRYPRGEGVGVQMP--ERGEILPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VALL +GT +  CL A+  L++ GL  TVADARF KPLD  LIR LA+ H V
Sbjct: 500 RIIKEGSKVALLSFGTRLAECLVAAEDLDAAGLPTTVADARFAKPLDLDLIRQLARHHAV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFGS V+  LA +GLLD  +K R LVLPD ++D   P     +AGL    
Sbjct: 560 LITVEEGAVGGFGSQVLHMLANEGLLDHGLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKG 619

Query: 541 IAATVFNILGQTREAL 556
           I +TVF  L  +R+AL
Sbjct: 620 IVSTVFTAL--SRDAL 633


>gi|302383898|ref|YP_003819721.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194526|gb|ADL02098.1| deoxyxylulose-5-phosphate synthase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 638

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 320/556 (57%), Positives = 391/556 (70%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSESEYD FG  H+STSISA LG A  RD +G++N VVAVIGDG+
Sbjct: 91  IRTLRMGGGLSGFTKRSESEYDPFGAAHASTSISAALGFAAARDQQGKQNKVVAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA      + VILNDN  +S+         PPVG +S+ L++  S    
Sbjct: 151 MSAGMAYEAMNNAAETTGQLTVILNDN-DMSIA--------PPVGGMSAYLAKQVSGGAY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +  R+  + V + +  P  E A K +EYARGM+ G   T FEELG YYIGPVDGH++D+L
Sbjct: 202 QNFRKFGREVVQHMPRPFREAARKAEEYARGMVVGG--TFFEELGFYYIGPVDGHDMDNL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V IL+      T  PV++HVVT+KG+GY  AE +ADK H V KFD  +GKQ KS +   S
Sbjct: 260 VPILKNAAAI-TDRPVVVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQSKSVSNAPS 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F   LI  A +D  +VAI AAM  GTGL+LF + +P R +DVGIAEQHAVTFAAGL
Sbjct: 319 YTKVFGTELIKRAAIDPSIVAITAAMPSGTGLDLFGQAYPKRTYDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPFCAIYS+F+QR YDQVVHDV +QKLPVRFAMDRAGLVGADG TH GSFD+ +M
Sbjct: 379 AADGMKPFCAIYSTFLQRGYDQVVHDVAIQKLPVRFAMDRAGLVGADGSTHAGSFDIGYM 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP MV+MA +DEA+L  M+ATA  IDDRPS FRYPRG+G+GVE+P      PLE+GKG
Sbjct: 439 GALPGMVLMAAADEADLAAMIATACEIDDRPSAFRYPRGDGVGVEIP--ELAAPLEIGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L +GT +Q  L A+ LL ++G+  TVADARF KPLDH LI  LA+ HE 
Sbjct: 497 RIVREGTAVAILSFGTRLQESLKAADLLAAHGISATVADARFAKPLDHDLITRLAREHEA 556

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFG+ V+QFLA +G LD  +K R L LPD + D  SPA Q   AGL   H
Sbjct: 557 LITVEEGAMGGFGAFVLQFLASEGALDAGLKIRTLHLPDVFQDQDSPAAQYVTAGLDADH 616

Query: 541 IAATVFNILGQTREAL 556
           IAA     LG  + AL
Sbjct: 617 IAAAALKALGVEKSAL 632


>gi|254438285|ref|ZP_05051779.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
           307]
 gi|198253731|gb|EDY78045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Octadecabacter antarcticus
           307]
          Length = 630

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 309/550 (56%), Positives = 388/550 (70%), Gaps = 16/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSES YDCFG  HSSTSISA LG AV RDL G   + +AVIGDGA
Sbjct: 89  IRTLRQKDGLSGFTKRSESPYDCFGAAHSSTSISAALGFAVARDLGGEGGDAIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEA+NNAG+L   +IVILNDN ++S+         PPVGA+SS LSRL +  P 
Sbjct: 149 MSAGMAYEALNNAGHLKKRLIVILNDN-EMSIA--------PPVGAMSSYLSRLYAGDPF 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +E +  AKG    +  P+ E A +  +  + M  G   TLFEELG  Y+GP+DGH+++ L
Sbjct: 200 QEFKAAAKGAVSFLPEPLQEGARRAKDMLKHMTVGG--TLFEELGFSYLGPIDGHDMEQL 257

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L  VK  + TGP+LIHV+T+KG+GY  AE  AD+ H  AKFD  TG+Q K+ +   S
Sbjct: 258 LSVLRTVK-IRATGPILIHVITKKGKGY--AENRADRGHATAKFDVVTGEQKKTPSNAPS 314

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAE+LI  A  D  +VA+ AAM  GTGL+ F+ RF +RCFDVGIAEQH VTF AGL
Sbjct: 315 YTSVFAESLIKHATKDDKIVAVTAAMPDGTGLDRFMSRFASRCFDVGIAEQHGVTFCAGL 374

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFC IYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 375 AAGGMKPFCTIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 434

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL  MVATA A D  P  FR+PRG G+GVE+P  +   PLE+GKG
Sbjct: 435 ANLPGFVVMAAADEAELTRMVATAVAHDSGPIAFRFPRGEGVGVEIP--DDAQPLEIGKG 492

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G RVA+L +GT +Q    A   L + G+  TVADARF KPLD  +I  LA+ HE 
Sbjct: 493 RMIRAGARVAILSFGTRLQEIEKACEALATRGITPTVADARFAKPLDRDMILGLARDHEA 552

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+IGGFGSHV Q LA++G+ D  +K+R +VLPD +ID   P +    AG+   H
Sbjct: 553 LITVEEGAIGGFGSHVAQLLAEEGVFDHGLKFRSMVLPDVFIDQAGPREMYEVAGMNAEH 612

Query: 541 IAATVFNILG 550
           I   V ++LG
Sbjct: 613 IETKVLHVLG 622


>gi|294678978|ref|YP_003579593.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
           1003]
 gi|294477798|gb|ADE87186.1| 1-deoxy-D-xylulose-5-phosphate synthase-2 [Rhodobacter capsulatus
           SB 1003]
          Length = 636

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 308/550 (56%), Positives = 390/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES YD FG GHSSTSISA LG  + R+L     + +AVIGDGA
Sbjct: 94  IRTLRTRGGLSGFTKRSESPYDAFGAGHSSTSISAALGFTMARELGSECGDAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G A+EA+N+ G+L   M VILNDN ++S+         PPVGALSS L+RL +  P+
Sbjct: 154 MTGGMAFEALNHGGHLGKRMFVILNDN-EMSIS--------PPVGALSSYLTRLYAEAPM 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++L+ +AKG    +  P  E A +  E  +GM  G   TLFEELG  Y+GPVDGH+++ L
Sbjct: 205 QDLKAMAKGAVSLLPEPFQEGARRAKEMLKGMTIGG--TLFEELGFDYVGPVDGHDLETL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +   +K T+ TGPVLIH +T+KG+GY  AE   D+ H  A+FD  TG Q K+++   S
Sbjct: 263 LHLFRTLK-TRATGPVLIHALTKKGKGYAPAENRPDRGHATARFDVLTGAQVKAASNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+LI +A  D+ +VA+ AAM  GTGLNLF  RFP RCFDVGIAEQH VTF+AGL
Sbjct: 322 YTKVFAESLIDQASRDEKIVAVTAAMPEGTGLNLFAERFPRRCFDVGIAEQHGVTFSAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH G+FD+ FM
Sbjct: 382 AAGGMKPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFDIGFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEA+L HMVATAAA D+ P  FRYPRG G+GV++P   +G+PLE+GKG
Sbjct: 442 ANLPGMVVMAAADEADLVHMVATAAAHDEGPIAFRYPRGEGMGVDMP--TQGVPLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG RVA+L +GT +   L A   L + GL  TVADARF KPLD  LI  L   HE 
Sbjct: 500 RIISEGARVAILSFGTRLAEVLKAREALAARGLAPTVADARFAKPLDKDLILRLVAEHEA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LI +EEG++GGFGSHV QFL++ G+ D   K+R +VLPD +IDH +P D  A A +  + 
Sbjct: 560 LICIEEGAVGGFGSHVAQFLSEQGVFDRGYKFRSMVLPDTFIDHANPEDMYAVARMNAAD 619

Query: 541 IAATVFNILG 550
           I A V ++LG
Sbjct: 620 IEAKVLDLLG 629


>gi|349686639|ref|ZP_08897781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           oboediens 174Bp2]
          Length = 654

 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 316/573 (55%), Positives = 406/573 (70%), Gaps = 33/573 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 94  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 153

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 154 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 204

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 205 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 262

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 263 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGEQ 322

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F R +P R FDVGIAEQ
Sbjct: 323 KKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAEQ 382

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 383 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 442

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 443 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGGGLGLELPAA-- 500

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  +   L A+ +L + GL  TVADARF 
Sbjct: 501 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLADALKAADMLAAQGLSPTVADARFA 560

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 561 KPIDTALVEQLARNHAVLITIEEGSVGGFGSYVMTHLAKTGLLD-RVRFRPMTLPDRFID 619

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG--QTRE 554
           H + A Q  +AGL    I AT  + LG  Q+R+
Sbjct: 620 HNTQAAQYHEAGLDAPAIVATALSALGVPQSRQ 652


>gi|393772959|ref|ZP_10361359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
           2-17]
 gi|392721698|gb|EIZ79163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Novosphingobium sp. Rr
           2-17]
          Length = 640

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 319/551 (57%), Positives = 390/551 (70%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG A+   L+G     +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAIANKLQGTPGRGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LSS L+RL S+   
Sbjct: 154 MSAGMAYEAMNNAAEAGNRLVVILNDN-DMSI--------APPVGGLSSYLARLVSSGQF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE+A+   +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGH+++ L
Sbjct: 205 LGLREMARKFARKLPRPLHVAAKKTDEFARGM--AMGGTLFEELGFYYVGPIDGHDLEAL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +LE V++    GP+LIHVVT+KG+GY  AE+AADKYHGV KF+  TG+Q KS A   S
Sbjct: 263 VPVLENVRDA-AEGPILIHVVTQKGKGYVPAEEAADKYHGVQKFNVVTGEQAKSPAGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEA+ D  + AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFAKALIAEAQRDDRICAITAAMPSGTGLDKFGDLFPGRSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPN+VVMA +DEAEL HMV TAA  D  P  FRYPRGNG+GV LP     +P  LE+G
Sbjct: 442 ATLPNLVVMAAADEAELVHMVHTAALHDSSPIAFRYPRGNGVGVPLPQ----VPERLEIG 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++ EG +VA+L  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  +H
Sbjct: 498 KGRVVREGSKVAILSLGTRLAEALKAADTLEAKGLSTTVADLRFAKPLDTDLIRRLMTTH 557

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EV++TVEEG+IGG G+HV+   + +GL D  +K R L LPD + D   P  Q  +AGL  
Sbjct: 558 EVVVTVEEGAIGGLGAHVLTLASDEGLTDAGLKIRTLRLPDVFQDQNKPEAQYDEAGLNA 617

Query: 539 SHIAATVFNIL 549
             I  TV   L
Sbjct: 618 PQIVDTVLKAL 628


>gi|163745284|ref|ZP_02152644.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
           HEL-45]
 gi|161382102|gb|EDQ06511.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibulbus indolifex
           HEL-45]
          Length = 642

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 308/554 (55%), Positives = 391/554 (70%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + ++R  DGLSGFTKRSES YD FG  HSSTSISA LG AVGRDL G       + +AVI
Sbjct: 94  IRSLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVGRDLGGVIPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG AYEA+NNAG L   +IVILNDN ++S+         PPVGA+SS LSRL +
Sbjct: 154 GDGAMSAGMAYEALNNAGDLKKRLIVILNDN-EMSI--------APPVGAMSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++ +  AKG    +  P  E A +  +  +GM    G TLFE LG  Y+GP++GH+
Sbjct: 205 EAPFQDFKAAAKGAVSLLPEPFREGAKRAKDMLKGM--AVGGTLFENLGFSYLGPINGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  V+  + TGP+LIH+ T+KG+GY  AE A D+ H  AKF+  TG+Q KS +
Sbjct: 263 MDQLLPVLRTVQQ-RATGPILIHIQTQKGKGYGPAEAARDRGHATAKFNVVTGEQKKSPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA++L+ EA  D  + A+ AAM  GTGL+LF  R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTRVFADSLLTEAAEDDKICAVTAAMPDGTGLDLFAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
            AGLA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADGPTH G+FD
Sbjct: 382 CAGLAAAGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V F+A LP  VVMA +DEAEL HMVATAAA D+ P  FRYPRG G GVE+P   +G PLE
Sbjct: 442 VAFLANLPGFVVMAAADEAELRHMVATAAAHDEGPIAFRYPRGEGRGVEMP--ERGTPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG +VALL +GT ++    A+  L + G+  T+ADARF KPLD  +I  LA+
Sbjct: 500 IGKGRIIREGSKVALLSFGTRLEEVEKAAEALSAKGITPTIADARFAKPLDRDMILKLAE 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA + + D  +K+R +VLPD +ID  +PAD  A AG+
Sbjct: 560 DHEALITIEEGAVGGFGSHVAQLLADEAVFDKGLKFRSMVLPDIFIDQANPADMYAVAGM 619

Query: 537 TPSHIAATVFNILG 550
               I A V ++LG
Sbjct: 620 NAEQITAKVLDVLG 633


>gi|452750501|ref|ZP_21950248.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
           JLT2015]
 gi|451961695|gb|EMD84104.1| 1-deoxy-D-xylulose 5-phosphate synthase [alpha proteobacterium
           JLT2015]
          Length = 615

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 317/557 (56%), Positives = 389/557 (69%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG AV   L GR    +AVIGDGA
Sbjct: 68  MRTIRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAVANKLSGRDGKAIAVIGDGA 127

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+R+ S+   
Sbjct: 128 MSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLARMVSSSEY 178

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +AK    ++    +  A+K +EYARGM   +G TLFEELG YY+GP+DGHN+D L
Sbjct: 179 LGLRSLAKKFASRLHKRFYNAASKAEEYARGM--ATGGTLFEELGFYYVGPIDGHNLDHL 236

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++++  GP+L+HVVT+KG GY  AE++ADKYHGV KFD  +G+     A   S
Sbjct: 237 IPVLENVRDSEQ-GPILVHVVTKKGHGYAPAEQSADKYHGVTKFDVVSGEMAPKKAGPPS 295

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEAE D  V AI AAM GGTG++ F + FP R FDVGIAEQH VTFAAGL
Sbjct: 296 YTGVFAKALIAEAERDDRVCAITAAMPGGTGVDKFAQHFPERSFDVGIAEQHGVTFAAGL 355

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PF AIYS+F+QRA+DQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 356 AAQGMRPFAAIYSTFLQRAFDQVVHDVAIQNLPVRFAIDRAGLVGADGQTHAGSFDVTYL 415

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HM  TAA  DD P  FRYPRGNG GVELP   +   LE+GKG
Sbjct: 416 ATLPNMVVMAAADEAELVHMTHTAAEYDDGPIAFRYPRGNGTGVELPETPE--RLEIGKG 473

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG +VA+L  GT +   L A+  L++ GL  TVAD RF KPLD ALIR LA +H+V
Sbjct: 474 RVLREGSKVAILSLGTRLGEALIAADELDAKGLPTTVADLRFAKPLDTALIRKLAATHDV 533

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVEEG+IGG G+HV+   + +GLLD  +K R + LPD + D   P  Q  +AGL    
Sbjct: 534 LVTVEEGAIGGLGAHVLTLASDEGLLDAGLKIRTMRLPDIFQDQDDPKRQYEEAGLDAPA 593

Query: 541 IAATVFNILGQTREALE 557
           I   V   L      +E
Sbjct: 594 IVRKVLEALRHNSTHVE 610


>gi|149915301|ref|ZP_01903829.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149811022|gb|EDM70861.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 642

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 315/557 (56%), Positives = 388/557 (69%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRQRDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGASETGHGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMN+AG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGAMSAGMAFEAMNHAGHLKKRLIVILNDN-EMSI--------APPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +E +  AKG    +  P  E A +  +  +G+  G   TLFEELG  YIGP+DGH+
Sbjct: 205 GEPFQEFKAAAKGAVSLLPPPFQEGARRAKDMLKGLTVGG--TLFEELGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  V+  + TGP LIHV+T KG+GY  AE   D  H  AKFD  TG+Q K+ +
Sbjct: 263 MDQLLPVLRTVR-ARATGPTLIHVITRKGKGYGPAEARRDGGHATAKFDLVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA+AL+  A  D  + AI AAM  GTGL+LF +R+P+RCFDVGIAEQHAVTF
Sbjct: 322 NAPSYTRVFADALLEHAAQDDRICAITAAMPEGTGLDLFEKRYPSRCFDVGIAEQHAVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADGPTH G+FD
Sbjct: 382 AAGLAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGPTHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V ++A LP   VMA +DEAEL HMVATA A D+ P  FRYPRG G GVE+P   +G  LE
Sbjct: 442 VAYLANLPGFTVMAAADEAELKHMVATAVAHDEGPIAFRYPRGEGQGVEMP--ERGEVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ +G RVALL +GT +   + AS  L + G+  +VADARF KPLD  LI  LA 
Sbjct: 500 IGKGRMIQQGSRVALLSFGTRLGEVMKASEALRARGITPSVADARFAKPLDRDLILGLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA   + D  +K+R +VLPD +ID  SP D  A AGL
Sbjct: 560 RHEALITIEEGAVGGFGSHVAQLLADHAVFDDGLKFRSMVLPDTFIDQASPEDMYATAGL 619

Query: 537 TPSHIAATVFNILGQTR 553
              HI A V ++LG  R
Sbjct: 620 DADHIEAKVLDVLGIAR 636


>gi|410943439|ref|ZP_11375180.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter frateurii
           NBRC 101659]
          Length = 660

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 318/566 (56%), Positives = 399/566 (70%), Gaps = 30/566 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN------NVVA 54
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV   L   K+      NV+A
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAHHLHAEKDPSYHERNVIA 160

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G   + +IV+LNDN ++S+         PPVG++S+ L
Sbjct: 161 VIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDN-EMSI--------APPVGSMSNYL 211

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V K++ G +   A + +EYARGMI+G   TLFEELG YY+GP
Sbjct: 212 SRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGG--TLFEELGFYYVGP 269

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH++  LV IL  +++    GP+L+H++TEKGRGY  AE A DKYH V+KF+  TG+Q
Sbjct: 270 VDGHDMSQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFNVVTGEQ 329

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+ A   SYT+ F+  L+  A+ D  +V + AAM  GTGL  F + +P R FDVGIAEQ
Sbjct: 330 KKAPAGPPSYTSVFSRELMRRAKTDDKLVTVTAAMPSGTGLTAFAKAYPDRFFDVGIAEQ 389

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 390 HAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATH 449

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLPNMVVMAPSDE EL H  ATA   D  P  FRYPRG+GIG++LP   K
Sbjct: 450 AGSFDLNYLCCLPNMVVMAPSDEIELLHATATACEYDAGPIAFRYPRGSGIGLDLP--EK 507

Query: 412 GIPLEVGKGRILIEGER-------VALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 464
           G  LE+GKGRI+ E  +       VA+L  GT +   L A+  L + G+ +TVADARF K
Sbjct: 508 GEVLEIGKGRIVRESRQAPGTRSGVAILSLGTRLHESLRAADQLAAQGVAVTVADARFAK 567

Query: 465 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           P+D  L+  L   H+VLIT+EEG+IGGF S VVQ LA+ G LD TVK+RP+ LPD+YIDH
Sbjct: 568 PIDTKLVDDLVAQHDVLITLEEGAIGGFSSLVVQHLAETGKLD-TVKFRPMALPDKYIDH 626

Query: 525 GSPADQLAQAGLTPSHIAATVFNILG 550
            +P  Q  +AGLT  HI  T    LG
Sbjct: 627 NNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|114769862|ref|ZP_01447472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2255]
 gi|114549567|gb|EAU52449.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HTCC2255]
          Length = 642

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 302/553 (54%), Positives = 395/553 (71%), Gaps = 18/553 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           M T+R+  GLSGFTKRSES +D FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 95  MRTIRKGGGLSGFTKRSESAFDPFGAAHSSTSISAALGFAVARDLGGAPEHGLGDAIAVI 154

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG AYEAMNNAG+L   +IVILNDNK +S+         PPVGA+S+ LSRL +
Sbjct: 155 GDGSMSAGMAYEAMNNAGHLGKRLIVILNDNK-MSIA--------PPVGAMSTYLSRLYA 205

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG    +  P  + A +  +  + M  G   TLFE+LG  YIGP+DGH+
Sbjct: 206 GEPFQELKAAAKGAVSLLPSPFQDGAKRARDILKHMTIGG--TLFEQLGFSYIGPIDGHD 263

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+ +L  VK+ + TGP+LIH +T+KG+GY  AE ++DKYHGVAKF+  +G+Q K+ +
Sbjct: 264 MEQLLNVLRTVKD-RATGPILIHAITQKGKGYAPAEASSDKYHGVAKFNVVSGQQQKTPS 322

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA ALIAEA  D  +VA+ AAM  GTGL++F + +P+R FDVGIAEQHAVTF
Sbjct: 323 NAPSYTKVFANALIAEASEDDKIVAVTAAMPDGTGLDIFEKHYPSRTFDVGIAEQHAVTF 382

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
            AG+A  G+KPFCA+YS+F+QR YDQVVHDV LQ+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 383 CAGMAAGGMKPFCALYSTFLQRGYDQVVHDVALQRLPVRFAIDRAGLVGADGATHAGSFD 442

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           ++F+  LP++VVMA +DEAEL HMVATA +IDDRPS FR+PRG G+GV+LP   KG  LE
Sbjct: 443 ISFLTNLPDIVVMAAADEAELMHMVATARSIDDRPSAFRFPRGEGVGVDLP--EKGRVLE 500

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ +G ++A+L +G  +Q  L A+  L   G++ T+ADARF KPLD  +I  L  
Sbjct: 501 IGKGRIIQQGSKIAILSFGARLQEVLKAADSLSLRGIKPTIADARFAKPLDKQMILDLVS 560

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            H+ LIT+EEG +GGFGSHV Q L  +G+ D   K+R +VLPD ++D  +P +    A +
Sbjct: 561 KHDALITIEEGVVGGFGSHVQQLLLDEGIFDHGFKFRSMVLPDTFLDQDTPKNMYENAAM 620

Query: 537 TPSHIAATVFNIL 549
           + + I   VF+IL
Sbjct: 621 SANDIEEKVFDIL 633


>gi|114329068|ref|YP_746225.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114317242|gb|ABI63302.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 669

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 320/573 (55%), Positives = 403/573 (70%), Gaps = 33/573 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLK-------GRKNNVV 53
           + T+R   GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL+           +V+
Sbjct: 99  IRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVARDLRRAAGEVGAGPEHVI 158

Query: 54  AVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSR 113
           AVIGDGAM+AG  YEAMNNAG L S ++VILNDN  +S+         PPVGA+S+ LSR
Sbjct: 159 AVIGDGAMSAGMVYEAMNNAGSLKSRLVVILNDN-DMSI--------APPVGAMSAYLSR 209

Query: 114 LQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVD 173
           L S+R    LR++A  + +     +   A + +EYARG+++G   TLFEELG YY+GP+D
Sbjct: 210 LLSSRSFLNLRDLAGKMARHFPRGIERTARRAEEYARGILTGG--TLFEELGFYYVGPID 267

Query: 174 GHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK 233
           GHN+D L+ +L  V++ + TGP+L+H +T KG GY  AE +ADKYH V++F+  TG+Q K
Sbjct: 268 GHNLDHLLPVLRNVRDAEETGPILVHAITRKGHGYAPAEASADKYHAVSRFNVVTGEQIK 327

Query: 234 ------SSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVG 287
                 +     +YT  FAEALIA AE +  VVAI+AAM  GTGL+ F +RFP RCFDVG
Sbjct: 328 PAPVPGAKPAPPTYTKVFAEALIAAAEDNPRVVAINAAMPSGTGLDAFEKRFPDRCFDVG 387

Query: 288 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 347
           IAEQHAVTFAAGLA EG+ PFCA+YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGAD
Sbjct: 388 IAEQHAVTFAAGLAVEGMVPFCALYSTFLQRGYDQLVHDVAIQHLPVRFAIDRAGLVGAD 447

Query: 348 GPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP 407
           G TH GSFD+ ++ CLP M++M+PSDEAEL H VAT AA D  PS  RYPRG G+GV LP
Sbjct: 448 GATHAGSFDMAYLGCLPGMMIMSPSDEAELVHAVATVAAYDSGPSAVRYPRGEGVGVALP 507

Query: 408 PGNKGI----PLEVGKGRILIEGER-VALLGYGTAVQSCLAASALLESNGLRLTVADARF 462
              KG      L +G+GRI+ EG   +A+L  GT +Q  L A+  L ++GL +TVAD RF
Sbjct: 508 RDEKGRLRGDVLPIGRGRIVREGRSGIAILSIGTRLQDALLAADDLAAHGLTVTVADGRF 567

Query: 463 CKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG----TVKWRPLVLP 518
            KPLD AL+  LA+ ++VL+ VEEGSIGG+ SHV+Q LAQ GLLD      +K R ++LP
Sbjct: 568 VKPLDTALVERLARENDVLVVVEEGSIGGYASHVMQHLAQAGLLDARDGHALKLRSMILP 627

Query: 519 DRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 551
           DRYIDH +  +Q+ QAGL    I  TV  +L Q
Sbjct: 628 DRYIDHDTQPNQIRQAGLDHQAIRDTVLKLLEQ 660


>gi|91762254|ref|ZP_01264219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718056|gb|EAS84706.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 637

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 294/559 (52%), Positives = 395/559 (70%), Gaps = 14/559 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFTKRSESEYD FG  HSSTSIS+ LGMA    L  + +N++AVIGDGA
Sbjct: 91  IKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSALGMAEANKLSNKSSNIIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG   + MIVILNDN  +S+          PVGA+ + L++L + +  
Sbjct: 151 ISAGMAYEAMNNAGASKTKMIVILNDN-DMSIA--------KPVGAMRTYLAKLLTGKIY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K +           A K +++ R  ++G   TLF  LG YY+GP+DGH++  L
Sbjct: 202 FSLRETFKLIVSAFSKRFSAKAGKAEDFLRSAVTGG--TLFNSLGFYYVGPIDGHDLSTL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+  +++K  GP++IH+ T+KG+GY YAEKA+D YHGV+KF+  TG+Q KS     +
Sbjct: 260 IPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKASDHYHGVSKFNVVTGEQVKSGTNLPA 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA  L+  AE D  VV + AAM GGTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIFAKDFPKRMFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADG TH GSFD+T++
Sbjct: 380 ATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVRFIIDRAGLVGADGSTHAGSFDITYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN +VMAPSDEAEL  M+ T+ +I+++P   RYPRGNGIGVELP  ++ I  E+GKG
Sbjct: 440 STLPNFIVMAPSDEAELVKMINTSMSINNKPCAIRYPRGNGIGVELPSIDENI--EIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG++V +L  GT ++ C  A+A L++ G+  T+ DARF KPLD  LI   A+ HEV
Sbjct: 498 RVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDARFAKPLDQELILKCAREHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV   L++ G+ D  +K+R ++LPD +I+  SP      AGL  S 
Sbjct: 558 MITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIFIEQDSPKKMYDVAGLNASQ 617

Query: 541 IAATVFNILGQTREALEIM 559
           I+  + +IL  T+E+++++
Sbjct: 618 ISKKILDIL-FTKESIKVV 635


>gi|414343119|ref|YP_006984640.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
 gi|411028454|gb|AFW01709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter oxydans H24]
          Length = 660

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 316/566 (55%), Positives = 399/566 (70%), Gaps = 30/566 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN------NVVA 54
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV   L+  ++      NV+A
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYHERNVIA 160

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G   + +IV+LNDN ++S+         PPVG++S+ L
Sbjct: 161 VIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDN-EMSI--------APPVGSMSNYL 211

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V K++ G +   A + +EYARGMI+G   TLFEELG YY+GP
Sbjct: 212 SRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGG--TLFEELGFYYVGP 269

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH++  LV IL  +++    GP+L+H++TEKGRGY  AE A DKYH V+KF+  TG+Q
Sbjct: 270 VDGHDMTQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFNVVTGEQ 329

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+ A   SYT+ F+  L+  A+ D  ++ + AAM  GTGL  F + +P R FDVGIAEQ
Sbjct: 330 KKAPAGPPSYTSVFSRELLRRAKTDDKLITVTAAMPSGTGLTAFAKAYPDRFFDVGIAEQ 389

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 390 HAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATH 449

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLPNMVVMAPSDE EL H  ATA   D  P  FRYPRG+GIG+ELP   K
Sbjct: 450 AGSFDLNYLCCLPNMVVMAPSDEIELLHATATACEYDAGPIAFRYPRGSGIGLELP--EK 507

Query: 412 GIPLEVGKGRILIEGER-------VALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 464
           G   E+GKGR++ E  +       VA+L  GT +   L A+  L + G+ +TVADARF K
Sbjct: 508 GEVQEIGKGRVVRESRQVPGTRSGVAILSLGTRLHESLRAADQLAAQGISVTVADARFAK 567

Query: 465 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           P+D  L+  L   HEVLIT+EEG+IGGF S VVQ LA+ G LD TVK+RP+ LPD+YIDH
Sbjct: 568 PIDTKLVDDLVAQHEVLITLEEGAIGGFSSLVVQHLAETGKLD-TVKFRPMALPDKYIDH 626

Query: 525 GSPADQLAQAGLTPSHIAATVFNILG 550
            +P  Q  +AGLT  HI  T    LG
Sbjct: 627 NNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|357977645|ref|ZP_09141616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. KC8]
          Length = 641

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 318/556 (57%), Positives = 388/556 (69%), Gaps = 14/556 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG AV   L G     +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAVANKLAGDPGKAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L+R+ S+RP 
Sbjct: 154 MSAGMAYEAMNNAEQAGNRLIVILNDN-DMSI--------APPVGGLSAYLARMVSSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++AK + +++  P+H+ A K DE+ARGM  G   TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LSLRDLAKRLARKLPRPLHDAARKTDEFARGMTMGG--TLFEELGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + ILE V++    GP+LIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 IPILENVRDAGE-GPILIHVVTQKGKGYAPAEAAADKYHGVQKFDVVTGAQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEA  D  V AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFAQALIAEATRDDKVCAITAAMPSGTGLDKFATLFPDRSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           + +G +PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 382 SAQGYRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDITYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HMV T A  D  P   RYPRGNG GV +P   +   L +GKG
Sbjct: 442 ASLPNFVVMAAADEAELTHMVHTMALHDSGPIAVRYPRGNGTGVGIPTTPE--RLAIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+ VA+L  GT +     A+  LE+ GL  +VAD RF KPLD ALIR+L  +HEV
Sbjct: 500 RLVREGKTVAILSLGTRLGEAEKAADQLEALGLSTSVADLRFAKPLDEALIRTLLTTHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEGS+GG G+HV+   + +GL+DG +K R + LPD + DH  P  Q A+AGL    
Sbjct: 560 AVTIEEGSVGGLGAHVLTLASDEGLIDGGLKLRTMRLPDIFQDHEKPETQYAEAGLDAEA 619

Query: 541 IAATVFNILGQTREAL 556
           I AT    L +    L
Sbjct: 620 IVATALAALRRNNTGL 635


>gi|329888093|ref|ZP_08266691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           ATCC 11568]
 gi|328846649|gb|EGF96211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           ATCC 11568]
          Length = 636

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 316/551 (57%), Positives = 385/551 (69%), Gaps = 15/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSESEYD FG  H+STSISA LG A  RD KG  N VVAVIGDG+
Sbjct: 91  MRTLRQGGGLSGFTKRSESEYDPFGAAHASTSISAALGFAAARDAKGGNNRVVAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG AYEAMNNA    S  ++V+LNDN  +S+         PPVG +S+ L++  S   
Sbjct: 151 MSAGMAYEAMNNAAEATSGQLMVVLNDN-DMSIA--------PPVGGMSAYLAKQVSGGA 201

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            + +R+V K     +  P  + A K +EYARGMI G   TLFEELG YY+GP+DGH++++
Sbjct: 202 YQNIRKVGKKFVDHMPRPFRDAARKAEEYARGMIVGG--TLFEELGFYYVGPIDGHDMEN 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV IL+      T  PVL+HVVT+KG+GY  AE +ADK H V KFD  +GKQ K+ +   
Sbjct: 260 LVPILKNAAAI-TDRPVLVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQAKAVSNAP 318

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F   LI  A+VD  ++AI AAM  GTGL+LF + FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYTKVFGTELIKHAQVDPTIMAITAAMPSGTGLDLFGQAFPDRTFDVGIAEQHAVTFAAG 378

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP CA+YS+F+QR YDQVVHDV +Q LPVRFAMDRAGLVGADG TH GSFD+ +
Sbjct: 379 LAADGMKPVCALYSTFLQRGYDQVVHDVAIQSLPVRFAMDRAGLVGADGSTHAGSFDIGY 438

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M  LP MV+MA SDEAEL  M++T+ AIDDRPS FRYPRG G+GV++P      PLE+GK
Sbjct: 439 MGALPGMVLMAASDEAELAAMISTSLAIDDRPSAFRYPRGEGVGVDIP--ELAAPLEIGK 496

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRI+ EG  VA+L  GT +Q  L A+ +L + G+  TVADARF KPLD  LI  LA+ HE
Sbjct: 497 GRIVREGTSVAILSLGTRLQESLKAADMLAAKGVSATVADARFAKPLDADLILRLAREHE 556

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
            LITVEEG++GGFG+ V+Q LA+ G LDG +K R L LPD + D   P    AQAGL   
Sbjct: 557 ALITVEEGAMGGFGAFVLQLLAEKGALDGGLKIRTLHLPDIFQDQDKPEVMYAQAGLNAE 616

Query: 540 HIAATVFNILG 550
           HIAA     LG
Sbjct: 617 HIAAAAVTALG 627


>gi|334344767|ref|YP_004553319.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
           chlorophenolicum L-1]
 gi|334101389|gb|AEG48813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium
           chlorophenolicum L-1]
          Length = 641

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 316/549 (57%), Positives = 387/549 (70%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESE+D FG  HSSTSISA LG AV   ++GR    +AVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRAESEFDPFGAAHSSTSISAALGFAVANKMQGRPGKGIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L+RL S+R  
Sbjct: 154 MSAGMAYEAMNNAREAGNRLIVILNDN-DMSI--------APPVGGLSAYLARLVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++AK + +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGLRDLAKRLARRLPRPLHNAARKTDEFARGM--AMGGTLFEELGFYYVGPIDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GP L+HVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 IPVLENVRDA-AEGPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGTQDKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEAE D  V AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFAKALIAEAERDPAVCAITAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN VVMA +DEAEL HMV T A  DD P   RYPRGNG+G+ LP   +   LE+GKG
Sbjct: 442 SSLPNFVVMAAADEAELVHMVHTCAVHDDGPIAVRYPRGNGVGIALPETPE--RLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  GT ++  L A+ +LE+ GL  TVAD RF KPLD A+IR L  +HEV
Sbjct: 500 RIVREGRQVAILSLGTRLEEALKAAEVLEAKGLSTTVADLRFAKPLDEAMIRRLLTTHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEGSIGG G+HV+   +  GL+D  +K R + LPD + D   P  Q A A L    
Sbjct: 560 AVTIEEGSIGGLGAHVLTMASDQGLIDNGLKLRTMRLPDIFQDQDKPEKQYADARLDAEA 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVDTVLTAL 628


>gi|349700302|ref|ZP_08901931.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 630

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 313/567 (55%), Positives = 402/567 (70%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 70  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 129

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 130 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 180

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YYIGP
Sbjct: 181 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYIGP 238

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 239 VDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGEQ 298

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 299 KKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 358

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 359 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 418

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 419 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAGLGLELPAA-- 476

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L + GL  TVADARF 
Sbjct: 477 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLSPTVADARFA 536

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGF S+V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 537 KPIDTALVEQLARNHAVLITIEEGSVGGFASYVMTHLAKTGLLD-RVRFRPMTLPDRFID 595

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H + A Q  +AGL    I AT  + LG
Sbjct: 596 HNTQAAQYHEAGLDAPAIVATALSALG 622


>gi|349687975|ref|ZP_08899117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           oboediens 174Bp2]
          Length = 664

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 313/567 (55%), Positives = 401/567 (70%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 94  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 153

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 154 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 204

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 205 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 262

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 263 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGEQ 322

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F R +P R FDVGIAEQ
Sbjct: 323 KKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAEQ 382

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 383 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 442

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 443 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGGGLGLELPAA-- 500

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  +   L A+ +L + GL  TVADARF 
Sbjct: 501 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLADALKAADMLAAQGLSPTVADARFA 560

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 561 KPIDTALVEQLARNHAVLITIEEGSVGGFGSYVMTHLAKTGLLD-RVRFRPMTLPDRFID 619

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H + A Q  +AGL  + I  T    LG
Sbjct: 620 HNTQAAQYHEAGLDAAAITNTALEALG 646


>gi|254418670|ref|ZP_05032394.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
 gi|196184847|gb|EDX79823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas sp. BAL3]
          Length = 636

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 314/551 (56%), Positives = 387/551 (70%), Gaps = 15/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  H+STSISA LG A  RD KG KN VVAVIGDG+
Sbjct: 91  IRTLRQPGGLSGFTKRSESEYDPFGAAHASTSISAALGFAAARDQKGEKNKVVAVIGDGS 150

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG AYEAMNNA    +  ++VILNDN  +S+         PPVG +S+ L+ L S   
Sbjct: 151 MSAGMAYEAMNNAAEATNGQLMVILNDN-DMSIA--------PPVGGMSAYLAGLVSGGA 201

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            + +R + + V + +  P    A K +EYARGM++G   TLFEELG YY+GP+DGH++++
Sbjct: 202 YQNVRRLGRSVAQHLPRPFRNAAKKAEEYARGMVTGG--TLFEELGFYYVGPIDGHDMEN 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV IL++    +   PVL+HVVT+KG+GY  AE +ADK H V KFD  +GKQ KS +   
Sbjct: 260 LVPILKKAAAIEDR-PVLVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQAKSVSNAP 318

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F   LI  A +D  +VAI AAM  GTGL+LF + FP R +DVGIAEQHAVTFAAG
Sbjct: 319 SYTKVFGTELIKHAALDPSIVAITAAMPSGTGLDLFGQAFPDRTYDVGIAEQHAVTFAAG 378

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP CAIYS+F+QR YDQVVHDV +Q LPVRFAMDRAGLVGADG TH GSFD+ F
Sbjct: 379 LAADGMKPVCAIYSTFLQRGYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGSFDIGF 438

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M  LP MV+MA +DEAEL  M++T+ AIDDRPS FRYPRG+G+GVE+P      P E+G+
Sbjct: 439 MGALPGMVLMAAADEAELAGMISTSLAIDDRPSAFRYPRGDGVGVEIP--ELAAPFEIGR 496

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRI+ EG  VA+L  GT +Q  L A+ LL + G+  TVADARF KPLD  LI  LA+ HE
Sbjct: 497 GRIVREGTSVAILSLGTRLQESLKAADLLAARGVSATVADARFAKPLDADLILRLAREHE 556

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
            LITVEEG++GGFG+ V+Q LA+ G LD  +K R L LPD + D  +PA   A AGL   
Sbjct: 557 ALITVEEGAMGGFGAFVLQLLAEKGALDRGLKVRTLNLPDVFQDQDAPAAMYALAGLNAD 616

Query: 540 HIAATVFNILG 550
           HIAA     LG
Sbjct: 617 HIAAAALRALG 627


>gi|390167485|ref|ZP_10219472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
 gi|389589893|gb|EIM67901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium indicum B90A]
          Length = 641

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 317/549 (57%), Positives = 386/549 (70%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISA LG AV   ++G+    +AVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAALGFAVANRMQGKPGKGIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L+RL S+R  
Sbjct: 154 MSAGMAYEAMNNAREAGNRLIVILNDN-DMSI--------APPVGGLSAYLARLVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++AK + +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGLRDLAKRLARRLPRPLHNAARKTDEFARGM--AMGGTLFEELGFYYVGPIDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GP L+HVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 IPVLENVRDA-AEGPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEAE D  + AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTGVFAKALIAEAERDPAICAITAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HMV T A  DD P   RYPRGNG G+ LP   +   LE+GKG
Sbjct: 442 ASLPNFVVMAAADEAELVHMVHTCAVHDDGPIAVRYPRGNGTGIALPATPE--RLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  GT ++  L A+  LE+ GL  TVAD RF KPLD ALIR L  +HEV
Sbjct: 500 RIVREGRQVAILSLGTRLEEALKAAETLEAKGLSTTVADLRFAKPLDEALIRRLLTTHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEGSIGG G+HV+   +  GL+D  +K R + LPD + D   P +Q A A L    
Sbjct: 560 AVTIEEGSIGGLGAHVLTMASDQGLIDNGLKLRTMRLPDIFQDQDKPENQYADARLDAGA 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVDTVLTAL 628


>gi|407799466|ref|ZP_11146359.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
           guishaninsula JLT2003]
 gi|407058651|gb|EKE44594.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceaniovalibus
           guishaninsula JLT2003]
          Length = 641

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/557 (56%), Positives = 390/557 (70%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG A  RDL GR +    + +AVI
Sbjct: 94  IRTLRQKDGLSGFTKRSESVYDPFGAAHSSTSISAALGFATARDLGGRPDPRLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG++   + V+LNDN ++S+         PPVGA+SS LSRL +
Sbjct: 154 GDGAMSAGMAFEAMNNAGHMKKRLFVVLNDN-EMSIA--------PPVGAMSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +E +  AKG    +  P+ + A +  +  + +  G   TLFEELG  YIGP+DGH+
Sbjct: 205 GAPFQEFKAAAKGAVSLLPQPLQQGARRAKDLIKHITIGG--TLFEELGFDYIGPLDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  V+  + TGP+L+HV+T KG+GY  AE+AAD+ H  +KFD  TGKQ KS +
Sbjct: 263 LDQLLPVLRTVR-ARATGPMLLHVITRKGKGYAPAEEAADRGHATSKFDVITGKQKKSPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ FA+ALI EA  D  + A+ AAM  GTGLNLF  R  +RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFAKALIREAADDPRICAVTAAMPDGTGLNLFAERHASRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA  G++PFCAIYS+F+QR YDQVVHDV LQ+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 382 AAGLAAGGMRPFCAIYSTFLQRGYDQVVHDVALQRLPVRFAIDRAGLVGADGATHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + F++ LP   VMA SDEAEL HMVATAAA DD P  FR+PRG G GV+LP   +G+PLE
Sbjct: 442 IAFLSNLPGFTVMAASDEAELVHMVATAAAHDDGPIAFRFPRGEGTGVDLP--ERGVPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRIL EG  VA+L  GT +   L A   L + G+  TVADARF KPLD  +I  LA+
Sbjct: 500 IGKGRILREGSGVAILCLGTRMVEVLQAHEALAARGIVPTVADARFAKPLDREMILQLAR 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            H+ LITVEEG++GGFGSHV Q LA +G+ D  + +R +VLPD +ID   P D  A AGL
Sbjct: 560 DHDALITVEEGAVGGFGSHVAQLLADEGVFDDGLVFRSMVLPDTFIDQADPRDMYAVAGL 619

Query: 537 TPSHIAATVFNILGQTR 553
               I A V +++G  R
Sbjct: 620 NAEDIEAKVLSVMGVAR 636


>gi|255262871|ref|ZP_05342213.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
 gi|255105206|gb|EET47880.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
          Length = 642

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 309/554 (55%), Positives = 392/554 (70%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRQRDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGAPEHGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG AYEAMNNAG+L   MIVILNDN ++S+         PPVGA+SS LSRL +
Sbjct: 154 GDGSMSAGMAYEAMNNAGHLKKRMIVILNDN-EMSIA--------PPVGAMSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG    +  P    A +  E  +GM  G   TLFEELG  Y+GP+DGH+
Sbjct: 205 GAPFQELKAAAKGAVSLLPEPFQLGAKRAKEMLKGMTVGG--TLFEELGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+ +L  VK+ + TGP+LIH +T+KG+GY  AE A+DK HGV+KFD  TG+Q K+ +
Sbjct: 263 MEQLLGVLRTVKD-RATGPILIHAITKKGKGYAPAEAASDKGHGVSKFDMVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F++AL+  A  D  + A+ AAM  GTGL  F+ R+ +RCFDVGIAEQHAVTF
Sbjct: 322 NAPSYTSVFSKALLDLAAKDDKICAVTAAMPDGTGLKQFMDRYASRCFDVGIAEQHAVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  G++PFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 382 SAGLAAGGMRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V F++ LP  VVMA +DEAEL  MV TAA  D+ P  FR+PRG G+GVE+P   K  P+E
Sbjct: 442 VGFLSNLPGFVVMAAADEAELTRMVVTAAQHDEGPIAFRFPRGEGVGVEIPEDAK--PIE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ EG+ VA+L +GT +Q   AA   L + G+  T+ADARF KPLD  +I  LA 
Sbjct: 500 IGKGRMIREGKGVAILSFGTRLQEVEAACEALAARGITPTIADARFAKPLDREMILKLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LITVEEG+IGGFGSHV Q LA +G+ D  +K+R +VLPD +ID   P D  + AGL
Sbjct: 560 DHEALITVEEGAIGGFGSHVAQLLADEGVFDHGLKYRSMVLPDTFIDQAGPRDMYSVAGL 619

Query: 537 TPSHIAATVFNILG 550
              HI A V ++LG
Sbjct: 620 NSEHIEAKVLDVLG 633


>gi|398383548|ref|ZP_10541616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
 gi|397724564|gb|EJK85029.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium sp. AP49]
          Length = 640

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 314/549 (57%), Positives = 385/549 (70%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISA LG AV   ++G+    +AVIGDGA
Sbjct: 93  IRTLRQGGGLSGFTKRTESEYDPFGAAHSSTSISAALGFAVANKMQGKPGKAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+RL S+R  
Sbjct: 153 MSAGMAYEAMNNAQEAGNRLVVILNDN-DMSI--------APPVGGLSAYLARLVSSREF 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++AK + +++  P+H+ A K DE+ARGM    G TLFEELG YY+GPVDGHN+D L
Sbjct: 204 LGLRDLAKRLARKLPRPLHKAAKKTDEFARGM--AMGGTLFEELGFYYVGPVDGHNLDQL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 262 IPVLENVRD-NAEGPVLIHVVTQKGKGYAPAEAAADKYHGVQKFDVITGTQAKAPPGPPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEA+ D  + AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTNVFAQALIAEAQRDPRLCAITAAMPSGTGLDKFELAFPDRTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 381 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HMV T A  D  P   RYPRGNG GV +P   + +P  +GKG
Sbjct: 441 ASLPNFVVMAAADEAELVHMVHTCATHDSGPIAVRYPRGNGTGVAMPKIPEALP--IGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL EG +VA+L  GT ++  + A+ +LE+ GL  +V D RF KPLD ALIR +  +HEV
Sbjct: 499 RILREGRQVAILSLGTRLEEAIKAADMLETKGLSASVVDLRFAKPLDEALIRRMLTTHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEG+IGG G+HV+   +  GL D  +K R L LPD + D   P  Q A A L    
Sbjct: 559 AVTIEEGAIGGLGAHVLTLASDLGLTDAGLKIRTLRLPDIFQDQDKPEKQYADARLDADA 618

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 619 IVDTVLTAL 627


>gi|71083316|ref|YP_266035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1062]
 gi|118595598|sp|Q4FN07.1|DXS_PELUB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71062429|gb|AAZ21432.1| 1-D-deoxyxylulose 5-phosphate synthase [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 637

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 294/559 (52%), Positives = 392/559 (70%), Gaps = 14/559 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFTKRSESEYD FG  HSSTSIS+ LGMA    L  + NN++AVIGDGA
Sbjct: 91  IKTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSALGMAEANKLSNKLNNIIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG   + MIVILNDN  +S+          PVGA+ + L++L + +  
Sbjct: 151 ISAGMAYEAMNNAGASKTKMIVILNDN-DMSIA--------KPVGAMRTYLAKLLTGKIY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K +           A K +++ R  ++G   TLF  LG YY+GP+DGH++  L
Sbjct: 202 FSLRETFKLIVSAFSKRFSVKAGKAEDFLRSAVTGG--TLFNSLGFYYVGPIDGHDLSTL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+  +++K  GP++IH+ T+KG+GY YAEKA+D YHGV+KF+  TG+Q KS     +
Sbjct: 260 IPILKNARDSKHQGPIMIHIKTQKGKGYSYAEKASDHYHGVSKFNVVTGEQVKSGTNLPA 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA  L+  AE D  VV + AAM GGTG+++F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFANTLVKHAERDSKVVGVTAAMPGGTGMDIFAKDFPKRMFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVRF +DRAGLVGADG TH GSFD+T++
Sbjct: 380 ATEGYKPYVAIYSTFLQRAYDQVVHDVAIQSLPVRFIIDRAGLVGADGSTHAGSFDITYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN +VMAPSDEAEL  M  T+  I+++P   RYPRGNGIGVELP  ++ I  E+GKG
Sbjct: 440 STLPNFIVMAPSDEAELVKMTNTSMTINNKPCAIRYPRGNGIGVELPSIDENI--EIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG++V +L  GT ++ C  A+A L++ G+  T+ DARF KPLD  LI   A+ HE 
Sbjct: 498 RVIQEGKQVCILSIGTRLEECKIAAAELKNKGIESTIVDARFAKPLDQELILKCAREHEA 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEGSIGGFGSHV   L++ G+ D  +K+R ++LPD +I+  SP      AGL  S 
Sbjct: 558 MITVEEGSIGGFGSHVENLLSEKGIFDKGLKFRTMILPDIFIEQDSPKKMYDVAGLNASQ 617

Query: 541 IAATVFNILGQTREALEIM 559
           I+  + +IL  T+E+++++
Sbjct: 618 ISKKILDILF-TKESIKVV 635


>gi|146278825|ref|YP_001168984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145557066|gb|ABP71679.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 637

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 306/550 (55%), Positives = 388/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YDCFG GHSSTSISA +G A  R+L G   + VA+IGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAAVGFAAARELGGDTGDAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+N+ G+L + +IVILNDN ++S+         PPVGALSS LSRL +  P 
Sbjct: 154 MSAGMAFEALNHGGHLKNRVIVILNDN-EMSIA--------PPVGALSSYLSRLYAGAPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ +  AKG    +  P  E A +  E  + +  G   TLFEELG  Y+GP+DGH++D L
Sbjct: 205 QDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGG--TLFEELGFSYVGPIDGHDLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  VK  + + PVLIHV+T+KG+GY  AE A D+ H   KF+  TG Q K  +   S
Sbjct: 263 LPVLRTVKQ-RASAPVLIHVITKKGKGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EAEVD+ + A+ AAM  GTGLNLF  RFP R FDVGIAEQHAVTF+AGL
Sbjct: 322 YTKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFADRFPKRIFDVGIAEQHAVTFSAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G++PFCAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 382 AAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP +VVMA +DEAEL HMVATAAA D+ P  FRYPRG+G+GVE+P   KG+PL++G+G
Sbjct: 442 SNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMPA--KGVPLQIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG R+ALL +GT +     A+  L + G+  TVADARF KPLD  LI  LA  HE 
Sbjct: 500 RVVSEGTRIALLSFGTRLSEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFGSHV Q LA+ G+ D   ++R +VLPD +IDH S     A AGL  + 
Sbjct: 560 LITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEAMYATAGLNAAD 619

Query: 541 IAATVFNILG 550
           I       LG
Sbjct: 620 IERKALETLG 629


>gi|383642490|ref|ZP_09954896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas elodea ATCC
           31461]
          Length = 641

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 314/551 (56%), Positives = 387/551 (70%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESE+D FG  HSSTSISA LG A    LKG     +AVIGDGA
Sbjct: 94  IRTIRQGGGLSGFTKRSESEFDPFGAAHSSTSISAALGFATANKLKGAPGKAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L+RL S+   
Sbjct: 154 MSAGMAYEAMNNAEAAGNRLIVILNDN-DMSIA--------PPVGGLSAYLARLISSSEY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +A+ VT+++   +   A K +E+ARGM   +G TLFEELG YY+GP+DGHN++ L
Sbjct: 205 LGLRSLARRVTQKVSRRLTAAAGKAEEFARGM--ATGGTLFEELGFYYVGPIDGHNLEHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ +  GP+L+HVVT+KG+GY  AEKAADKYHGV KFD  TG Q K+     +
Sbjct: 263 IPVLENVRDAEQ-GPILVHVVTKKGKGYAPAEKAADKYHGVQKFDVITGAQAKAPPGPPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL+AEAE D  V AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTKVFADALLAEAERDATVCAITAAMPSGTGLDKFQAMFPERTFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPN VVMA +DE EL HM  TAA  D  P   RYPRGNGIG+ELP     +P  LE+G
Sbjct: 442 ASLPNFVVMAAADEVELVHMTHTAALHDSGPIALRYPRGNGIGLELPK----VPERLEIG 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++ EG++VA+L  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  +H
Sbjct: 498 KGRVVREGKKVAILSLGTRLAEALKAADTLEAKGLSTTVADLRFAKPLDEDLIRRLLTTH 557

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EV +T+EEG+IGG G+HV+   +  GL+D  +K R + LPD + D   P  Q  +AGL  
Sbjct: 558 EVAVTIEEGAIGGLGAHVLTLASDTGLIDAGLKLRTMRLPDMFQDQDKPEKQYDEAGLNA 617

Query: 539 SHIAATVFNIL 549
           +HI  TV   L
Sbjct: 618 AHIVDTVLKAL 628


>gi|400756076|ref|YP_006564444.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
           2.10]
 gi|398655229|gb|AFO89199.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
           gallaeciensis 2.10]
          Length = 642

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 310/556 (55%), Positives = 390/556 (70%), Gaps = 22/556 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES +D FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPFDPFGAAHSSTSISAALGFAVARDLGGVVPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSI--------APPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+ VAKG    +  P  E A +  +  +GM    G TLFE LG  Y+GP+DGH+
Sbjct: 205 EEPFQELKAVAKGAASLLPEPFREGAKRAKDMLKGM--AVGGTLFESLGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGP+LIHV+T+KG+GY  AE+A DK H  AKFD  TG+Q K+ +
Sbjct: 263 MDQLLPVLRTVK-ARATGPILIHVLTKKGKGYAPAERARDKGHATAKFDMVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L+  A  D  + A+ AAM  GTGL+L   R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFGKELVRLAAEDDKICAVTAAMPDGTGLSLMAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP-- 414
           + +MA LP MVVMA +DEAEL HMVATAAA DD P  FRYPRG G GV++P     +P  
Sbjct: 442 IAYMANLPGMVVMAAADEAELAHMVATAAAYDDGPIAFRYPRGEGEGVDMPE----VPEV 497

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+GKGR++  G+RVALL +GT +     A+  L + G+  T+ADARF KPLD  LI +L
Sbjct: 498 LEIGKGRMIQNGKRVALLSFGTRLGEVRKAAEALTAKGITPTIADARFAKPLDRDLILNL 557

Query: 475 AKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           A SH+ LIT+EEG++GGFGSHV Q LA++G+ D  +K+R +VLPD +ID  SPAD    A
Sbjct: 558 AASHDALITIEEGAVGGFGSHVAQLLAEEGVFDSGLKYRSMVLPDTFIDQASPADMYTVA 617

Query: 535 GLTPSHIAATVFNILG 550
            +    I A V  +LG
Sbjct: 618 AMNAPQIEAKVLEVLG 633


>gi|384921844|ref|ZP_10021805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
 gi|384464259|gb|EIE48843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citreicella sp. 357]
          Length = 641

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/554 (56%), Positives = 392/554 (70%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+RQ  GLSGFTKRSES YDCFG GHSSTSISA LG AV RDL G  +    + +AVI
Sbjct: 94  IRTIRQQGGLSGFTKRSESPYDCFGAGHSSTSISAALGFAVARDLGGTTDTGAGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L   +IVILNDN ++S+          P GA+SS LSRL +
Sbjct: 154 GDGAMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSIAA--------PTGAMSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++L+  AKG    +  P+ E A +  E  +GM    G TLFEELG  Y+GP+DGH+
Sbjct: 205 EAPFQDLKVAAKGAVALLPPPLREGAKRAKEMIKGM--AVGGTLFEELGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ +L  V++ + TGP+LIH +T+KG+GY  AE +AD+ H  AKFD +TG+Q K+ +
Sbjct: 263 LHQLLPVLRTVRD-RATGPILIHALTKKGKGYAPAEGSADRGHARAKFDVSTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ FA+ L   AEVD  + A+ AAM  GTGL+L   RFP R FDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFAKELTRLAEVDPRICAVTAAMPDGTGLDLMAERFPARVFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA  GL+PFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G++D
Sbjct: 382 AAGLAAGGLRPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAYD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + FM  LP MVVMA +DEAEL HMVATAAA D  P  FRYPRG G GV++P   +G  LE
Sbjct: 442 IAFMTNLPGMVVMAAADEAELKHMVATAAAYDSGPIAFRYPRGEGRGVDMP--EQGEILE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G+GR++ +G RVALL +GT +   LAA+  L++ G+  TVADARF KPLD  LI  LA 
Sbjct: 500 IGRGRLIRQGARVALLSFGTRLGETLAAAERLDARGIAATVADARFAKPLDRDLILRLAT 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE L+T+EEG+IGGFGSHV Q LA +G+ D  +K+R +VLPD +IDH SP    A AGL
Sbjct: 560 THEALLTIEEGAIGGFGSHVAQLLADEGIFDHGLKFRSMVLPDSFIDHASPDAMYAAAGL 619

Query: 537 TPSHIAATVFNILG 550
             + I   V   LG
Sbjct: 620 DAARIEEKVLTTLG 633


>gi|453330452|dbj|GAC87680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconobacter thailandicus
           NBRC 3255]
          Length = 660

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 314/566 (55%), Positives = 399/566 (70%), Gaps = 30/566 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN------NVVA 54
           + T+RQ +GLSGFT+R+ESEYD FG  HSSTSISAGLGMAV   L+  ++      NV+A
Sbjct: 101 IRTLRQPEGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYHERNVIA 160

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G   + +IV+LNDN ++S+         PPVG++S+ L
Sbjct: 161 VIGDGSISAGMAYEAMNNAAVAGPGANRLIVVLNDN-EMSI--------APPVGSMSNYL 211

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V K++ G +   A + +EYARGMI+G   TLFEELG YY+GP
Sbjct: 212 SRLMSSRQFFGLRDLAGKVAKRLPGKIERTAKRAEEYARGMITGG--TLFEELGFYYVGP 269

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH++  LV IL  +++    GP+L+H++TEKGRGY  AE A DKYH V+KF+  TG+Q
Sbjct: 270 VDGHDMTQLVPILRNLRDADDQGPILLHIITEKGRGYKPAEAAGDKYHAVSKFNVVTGEQ 329

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+ A   SYT+ F+  L+  A+ D  ++ + AAM  GTGL  F + +P R FDVGIAEQ
Sbjct: 330 KKAPAGPPSYTSVFSRELLRRAKTDDKLITVTAAMPSGTGLTAFAKAYPDRFFDVGIAEQ 389

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 390 HAVTFAAGIASEGLRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFAIDRAGLVGADGATH 449

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLPNMVVMAPSDE EL H  ATA   D  P  FRYPRG+GIG++LP   +
Sbjct: 450 AGSFDLNYLCCLPNMVVMAPSDEIELLHATATACEYDAGPIAFRYPRGSGIGLDLP--EE 507

Query: 412 GIPLEVGKGRILIEGER-------VALLGYGTAVQSCLAASALLESNGLRLTVADARFCK 464
           G   E+GKGR++ E  +       VA+L  GT +   L A+  L + G+ +TVADARF K
Sbjct: 508 GEVQEIGKGRVVRESRQVPGTRSGVAILSLGTRLHESLRAADQLAAQGISVTVADARFAK 567

Query: 465 PLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           P+D  L+  L   HEVLIT+EEG+IGGF S VVQ LA+ G LD TVK+RP+ LPD+YIDH
Sbjct: 568 PIDTKLVDDLVAQHEVLITLEEGAIGGFSSLVVQHLAETGKLD-TVKFRPMALPDKYIDH 626

Query: 525 GSPADQLAQAGLTPSHIAATVFNILG 550
            +P  Q  +AGLT  HI  T    LG
Sbjct: 627 NNPDVQYDEAGLTAPHIVRTAAAALG 652


>gi|149202565|ref|ZP_01879537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
 gi|149143847|gb|EDM31881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
          Length = 643

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 314/554 (56%), Positives = 388/554 (70%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 95  IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGNCPSGLGDAIAVI 154

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 155 GDGAMSAGMAFEAMNNAGHLKKRLIVILNDN-EMSIA--------PPVGALSSYLSRLYA 205

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++ +  AKG    +  P  E A +  +  +G+    G TLFEELG  Y+GP+DGH+
Sbjct: 206 EAPFQDFKAAAKGAISLLPPPFQEGARRAKDMLKGL--AVGGTLFEELGFSYVGPIDGHD 263

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ +L  VK  + TGP+LIHV+T+KG+GY  AE+A D  H  AKFD  TG+Q KS +
Sbjct: 264 LHQLLPVLRTVK-ARATGPILIHVLTKKGKGYGPAERARDGGHATAKFDVLTGEQRKSPS 322

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA+AL+A A  D  + A+ AAM  GTGLNLF  R+P+R FDVGIAEQHAVTF
Sbjct: 323 NAPSYTGVFAKALLAHAAQDDKICAVTAAMPDGTGLNLFAERYPSRLFDVGIAEQHAVTF 382

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  GLKPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 383 SAGLAAGGLKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 442

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
             F+A LP  VVMA +DEAEL HMVATAAA D+ P  FRYPRG G+GV +P   +G PLE
Sbjct: 443 TAFLANLPGFVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGEGMGVTMP--ERGEPLE 500

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+  G RVA+L +GT +   L AS  L + G+  T+ADARF KPLD ALI  L +
Sbjct: 501 IGKGRIIQTGARVAILSFGTRLSEVLKASEALRARGITPTIADARFAKPLDEALILDLVQ 560

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE +ITVEEG+IGGF SHV  FLA+  + D   K+R +VLPD +ID  S  D  A A L
Sbjct: 561 NHEAMITVEEGAIGGFASHVSHFLAEAQVFDRGFKFRSMVLPDTFIDQASAEDMYAVARL 620

Query: 537 TPSHIAATVFNILG 550
             + I A V ++LG
Sbjct: 621 NAADIEARVLDVLG 634


>gi|349700981|ref|ZP_08902610.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 640

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 312/567 (55%), Positives = 400/567 (70%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 70  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 129

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 130 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSIA--------PPVGAMSNYL 180

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YYIGP
Sbjct: 181 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYIGP 238

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 239 VDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGEQ 298

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 299 KKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 358

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 359 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 418

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 419 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAGLGLELPAA-- 476

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L + GL  TVADARF 
Sbjct: 477 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLSPTVADARFA 536

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGF S+V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 537 KPIDTALVEQLARNHAVLITIEEGSVGGFASYVMTHLAKTGLLD-RVRFRPMTLPDRFID 595

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H + A Q  +AGL    I  T    LG
Sbjct: 596 HNTQAAQYHEAGLDAVAITNTALEALG 622


>gi|310814825|ref|YP_003962789.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
           Y25]
 gi|385234996|ref|YP_005796338.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
           vulgare WSH-001]
 gi|308753560|gb|ADO41489.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ketogulonicigenium vulgare
           Y25]
 gi|343463907|gb|AEM42342.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Ketogulonicigenium
           vulgare WSH-001]
          Length = 644

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 317/555 (57%), Positives = 393/555 (70%), Gaps = 19/555 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-----KGRKNNVVAV 55
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL     +G   + +A+
Sbjct: 96  IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGATPEGAIGDTIAI 155

Query: 56  IGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQ 115
           IGDG+M+AG A+EAMNNAG L   M VILNDN ++S+         PPVGALSS LSRL 
Sbjct: 156 IGDGSMSAGMAFEAMNNAGDLKKRMFVILNDN-EMSIA--------PPVGALSSYLSRLY 206

Query: 116 SNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH 175
           +  P ++L+  AKG    +  P+ E A +  E  + M  G   T+FEELG  Y+GP+DGH
Sbjct: 207 AGGPFQDLKAAAKGAVNMLPEPLREGAKRAKEMLKHMTVGG--TMFEELGFSYLGPIDGH 264

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           +++ L+A+L  V + + TGPVLIH +T+KG+GY  AE A DK HGV KFD  TG+Q K  
Sbjct: 265 DMEQLLAVLRTVHD-RATGPVLIHAITQKGKGYAPAEAARDKGHGVGKFDVVTGEQAKVK 323

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
           +   SYT+ FA ALI +AE D  +VAI AAM  GTGL+ F+ RF  RCFDVGIAEQHAVT
Sbjct: 324 SNAPSYTSVFANALIEQAEKDSRIVAITAAMPDGTGLDKFMVRFADRCFDVGIAEQHAVT 383

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FAAGLA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+F
Sbjct: 384 FAAGLAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAF 443

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ FMA LP MVVMA +DEAEL  MVATAA  +D P  FR+PRG G+GVE+P   +  PL
Sbjct: 444 DIAFMANLPGMVVMAAADEAELVRMVATAAQHNDGPIAFRFPRGEGVGVEIPADAQ--PL 501

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+GKGRI   G RVA+L +GT +    AA+ LL + G+  T+ADARF KPLD  +I  LA
Sbjct: 502 EIGKGRITQAGARVAILSFGTRLSEAEAAAELLSARGITPTIADARFAKPLDRDMILRLA 561

Query: 476 KSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           + HEVLIT+EEG+IGGFGSHV Q LA+ G+ D  +K+R +VLPD +ID  +P D    AG
Sbjct: 562 REHEVLITIEEGAIGGFGSHVAQLLAEAGVFDHGLKFRSMVLPDIFIDQANPRDMYDVAG 621

Query: 536 LTPSHIAATVFNILG 550
           L  + IA  V + LG
Sbjct: 622 LNANDIANKVLSALG 636


>gi|103487835|ref|YP_617396.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
           RB2256]
 gi|118595621|sp|Q1GQK9.1|DXS_SPHAL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|98977912|gb|ABF54063.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Sphingopyxis alaskensis
           RB2256]
          Length = 642

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 315/559 (56%), Positives = 383/559 (68%), Gaps = 18/559 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG A+   LK      +AVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAIANKLKDEPGRAIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L++L S+RP 
Sbjct: 154 MSAGMAYEAMNNAKQAGNRLIVILNDN-DMSI--------APPVGGLSAYLAKLVSSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            ELRE+A+   +++  P+H+ A K DEYARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LELREIARRFARKLPEPLHKAAKKTDEYARGM--AMGGTLFEELGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + ILE V+++   GPVLIH VT+KG+GY  AE AADKYHGV KFD  TG+Q K+     +
Sbjct: 263 IPILENVRDSDH-GPVLIHAVTKKGKGYAPAEAAADKYHGVQKFDVITGEQAKAPPGPPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L   AE DK +VAI AAM  GTG++ F +  P R FDVGIAEQHAVTFAAGL
Sbjct: 322 YQNVFGETLAKLAETDKRIVAITAAMPSGTGVDKFAKVHPDRSFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 382 AAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDITYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPNMVVMA +DEAEL HM  TAA  D  P  FRYPRGNG GV LP     +P  LE+G
Sbjct: 442 ATLPNMVVMAAADEAELVHMTYTAAEHDAGPIAFRYPRGNGTGVALP----AVPQKLEIG 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++ EG+ VA+L  GT +   L A+  LE+ GL  +V D RF KPLD  LIR    +H
Sbjct: 498 KGRVVREGKTVAILSLGTRLAEALKAADTLEARGLSTSVIDLRFAKPLDEELIRRTLAAH 557

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EV +TVEEGSIGG G+HV+   + +GL+D  +K R L LPD + D   P  Q   AGL  
Sbjct: 558 EVCVTVEEGSIGGLGAHVLTLASDEGLIDAGLKLRTLRLPDMFQDQDKPELQYDAAGLNA 617

Query: 539 SHIAATVFNILGQTREALE 557
             I  TV   L      +E
Sbjct: 618 PQIVDTVLKALRHNSAGVE 636


>gi|114798103|ref|YP_760539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
           15444]
 gi|122942403|sp|Q0C154.1|DXS_HYPNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114738277|gb|ABI76402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hyphomonas neptunium ATCC
           15444]
          Length = 640

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 318/551 (57%), Positives = 390/551 (70%), Gaps = 16/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSESEYD FG  H+STSISAGLG A  RDL+ + N+V+ VIGDG+
Sbjct: 94  MRTLRQGGGLSGFTKRSESEYDPFGAAHASTSISAGLGFAKSRDLQNKDNHVICVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG   S MIVILNDN  +S+         PPVGA+S   SRL S+RP 
Sbjct: 154 MSAGMAYEAMNNAGADRSRMIVILNDN-DMSIA--------PPVGAMSHYFSRLVSSRPY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LR +AK V + +G  +   A + +EY RG     G TLFEE+G YYIGPVDGH++D L
Sbjct: 205 RGLRRIAKKVVQPMG--LESPARRAEEYLRGF--AMGGTLFEEMGFYYIGPVDGHDLDTL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE +K  +  GP+L+HVVT+KG+GY  AE +ADKYHGV+KF   TG+Q K +    S
Sbjct: 261 LDLLENIKAMQD-GPILLHVVTQKGKGYAPAENSADKYHGVSKFSVVTGEQAKGAGGPPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F + L    E D  + AI AAM  GT  ++F ++FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YQKVFGQTLAKLGETDDKICAITAAMPSGTSTDIFGKKFPDRHFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPFCAIYS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD+ ++
Sbjct: 380 AADGMKPFCAIYSTFLQRGYDQVVHDVAIQQLPVRFAIDRAGLVGADGATHAGSFDIGYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP  V MAPSDEAEL  MV T+  IDDRPS  RYPRG G+GV +P   K  PLE+GKG
Sbjct: 440 GALPGFVCMAPSDEAELARMVLTSLEIDDRPSAVRYPRGEGVGVVIPDLLK--PLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  +A+L YGT +Q  L A+ +L + GL  TVADARF KPLD+ LI  LA+ HEV
Sbjct: 498 RVVREGTSIAILSYGTRLQEALKAAEMLAAQGLSATVADARFAKPLDNELIERLAREHEV 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEGS GGFGS V++ LA  G LD  +K R + LPD + DH +PA    QAGLT  H
Sbjct: 558 LVTIEEGSRGGFGSFVLEHLANCGGLDAGLKVRVMTLPDVFQDHDTPAAMYDQAGLTARH 617

Query: 541 IAATVFNILGQ 551
           IAA     LG+
Sbjct: 618 IAARAIEALGR 628


>gi|254460223|ref|ZP_05073639.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206676812|gb|EDZ41299.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 624

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 310/547 (56%), Positives = 391/547 (71%), Gaps = 14/547 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKR+ESE+D FG  HSSTSISA LG  + RD+     + VA+IGDG+
Sbjct: 76  MKTLRQEGGLSGFTKRAESEFDPFGAAHSSTSISAALGFTIARDMGLPTGDAVAIIGDGS 135

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG     M VILNDN ++S+         PPVGA+S  LS L ++ PL
Sbjct: 136 ISAGMAYEALNNAGAEGRRMFVILNDN-EMSIA--------PPVGAMSKYLSGLYAS-PL 185

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            EL+ +A+G    + GP+ + A +  +   G ++ +G T+FE+LG  Y+GPVDGH++D L
Sbjct: 186 GELQTIAEGFEAALPGPLRDHARRARQLVTG-VADAGGTMFEDLGFQYVGPVDGHDMDQL 244

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L   + T++TGPVLIH  T KG+GY  AE++ADKYHGVAKFD +TG Q KS     S
Sbjct: 245 LSVLRAAR-TRSTGPVLIHCCTVKGKGYAPAEQSADKYHGVAKFDVSTGVQSKSRPNAPS 303

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F +AL   AE D  +V I AAM  GTG+++F   FP R FDVGIAEQH VTFAAG+
Sbjct: 304 YTSVFGKALSKLAEADPKIVGITAAMPSGTGMDIFADHFPKRMFDVGIAEQHGVTFAAGM 363

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYSSF+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADGPTH G+FDV ++
Sbjct: 364 AAGGLKPFCAIYSSFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGPTHAGAFDVGYL 423

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPNM VMA SDEAEL HMVATAAA D  P  FRYPRG+G GVE+P    G  LE+GKG
Sbjct: 424 SALPNMTVMAASDEAELVHMVATAAAHDSGPIAFRYPRGSGTGVEIP--EIGEVLEIGKG 481

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L +G  +   L A+ L+E+ G+  TVADARF KPLDHALIR L K+H+ 
Sbjct: 482 RIVREGADVAILSFGAHLSESLKAADLMEAQGVSATVADARFAKPLDHALIRKLVKTHKA 541

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+E+GS GGFG+ V+ +LA +GLLDG +  R + LPDR+ID  +P    A AGLT + 
Sbjct: 542 LITIEQGSQGGFGAMVLHYLAGEGLLDGDLAIRTMTLPDRFIDQAAPDAMYADAGLTATD 601

Query: 541 IAATVFN 547
           IAAT   
Sbjct: 602 IAATALQ 608


>gi|294012272|ref|YP_003545732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
           UT26S]
 gi|292675602|dbj|BAI97120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium japonicum
           UT26S]
          Length = 644

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 315/549 (57%), Positives = 385/549 (70%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISA LG AV   ++G+    +AVIGDG+
Sbjct: 97  IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAALGFAVANRMQGKPGKGIAVIGDGS 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ L+RL S+R  
Sbjct: 157 MSAGMAYEAMNNAREAGNRLIVILNDN-DMSI--------APPVGGLSAYLARLVSSREF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++AK + +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 208 LGLRDLAKRLARRLPRPLHNAARKTDEFARGM--AMGGTLFEELGFYYVGPIDGHNLDQL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GP L+HVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 266 IPVLENVRDA-AEGPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPGPPS 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEAE D  + AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 325 YTGVFAKALIAEAERDPAICAITAAMPSGTGLDKFGAAFPDRTFDVGIAEQHAVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 385 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HMV T A  DD P   RYPRGNG G+ LP   +   LE+GKG
Sbjct: 445 ASLPNFVVMAAADEAELVHMVHTCAVHDDGPIAVRYPRGNGTGIALPATPE--RLEIGKG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  GT ++  L A+  LE+ GL  TVAD RF KPLD ALIR L  +HEV
Sbjct: 503 RIVREGRQVAILSLGTRLEEALKAAETLEAKGLSTTVADLRFAKPLDEALIRRLLTTHEV 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEG++GG G+HV+   +  GL+D  +K R + LPD + D   P  Q A A L    
Sbjct: 563 AVTIEEGAVGGLGAHVLTMASDQGLIDNGLKLRTMRLPDIFQDQDKPEKQYADARLDAGA 622

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 623 IVDTVLTAL 631


>gi|55295806|dbj|BAD67657.1| putative 1-deoxy-D-xylulose 5-phosphate synthase 1 [Oryza sativa
           Japonica Group]
 gi|215768492|dbj|BAH00721.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 565

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 299/524 (57%), Positives = 375/524 (71%), Gaps = 23/524 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT++Q  GLSGFT R ESEYD FG GH   S+SAGLGMAV RDL GRKN +V VI +  
Sbjct: 53  FHTIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWT 112

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM +AG+LDS+M+VILND++   LP A     +  + ALSSALS++QS++  
Sbjct: 113 TMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGF 171

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKG++K  G  MHE AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL
Sbjct: 172 RKFREAAKGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDL 231

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRG---------YPYAEKAADKYHGVAKFDPATGKQ 231
           + +L+EV    +TGPVL+HV+TE  +           P  E   D    + KF       
Sbjct: 232 ICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDILKF------- 284

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
              +  +++Y   F E+LIAEAE DK +V +H  MG    + LF  RFP R FD+GIAEQ
Sbjct: 285 -LENGLSRTYNDCFVESLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQ 343

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTF+AGLAC GLKPFC I S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+
Sbjct: 344 HAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTN 403

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPG 409
            G FD+TFM+CLPNM+VM+PS+E EL  MVATAA ++DRP CFRYP+G  +G    L  G
Sbjct: 404 SGPFDITFMSCLPNMIVMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYG 463

Query: 410 NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHA 469
           N   PLE+GKG IL EG+ +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  
Sbjct: 464 N---PLEIGKGEILAEGKEIAFLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDID 520

Query: 470 LIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWR 513
           LIR L + H+ LITVEEG++GGFGSHV QF++ DGLLDG +K R
Sbjct: 521 LIRMLCQQHDFLITVEEGTVGGFGSHVSQFISLDGLLDGKIKVR 564


>gi|84685989|ref|ZP_01013885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666082|gb|EAQ12556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2654]
          Length = 648

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 303/553 (54%), Positives = 384/553 (69%), Gaps = 18/553 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNN----VVAVI 56
           M ++RQ DGLSGFTKR+ES YD FG  HSSTSISA LG AV RDL G   N     +AVI
Sbjct: 100 MTSIRQKDGLSGFTKRTESPYDPFGAAHSSTSISAALGFAVARDLGGSPENGIGDCIAVI 159

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L+  +IV+LNDN ++S+         PPVGALS+ LSRL +
Sbjct: 160 GDGAMSAGMAFEAMNNAGHLNKRLIVVLNDN-EMSI--------APPVGALSTYLSRLYA 210

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +E +  AKG  + +  P  E A +  E  +GM  G   T+FEELG  Y+GP+DGH+
Sbjct: 211 GEPFQEFKAAAKGAVRLLPPPFQEGARRAKEMLKGMTVGG--TMFEELGFSYVGPIDGHD 268

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L  +L  VK  + TGPVLIH +T KG+GY  AE+  DK H  AKFD  TGKQ K+ +
Sbjct: 269 MDQLAQVLRTVK-ARATGPVLIHAITRKGKGYRPAEERDDKGHATAKFDVPTGKQHKAPS 327

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L    E D  +VA+ AAM  GTG+++F  RFP+R FDVGIAEQH VTF
Sbjct: 328 NAPSYTSVFGKTLTKLGETDDKIVAVTAAMPDGTGVDIFGARFPSRTFDVGIAEQHGVTF 387

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  G++PFCAIYS+F+QR YDQVVHDV +Q+LPVRF +DRAGLVGADG TH GSFD
Sbjct: 388 SAGLAAGGMRPFCAIYSTFLQRGYDQVVHDVAIQRLPVRFMIDRAGLVGADGATHAGSFD 447

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++A LP+ V+MAPSDEAEL +M+ TA  IDDRPS  RYPRG G+G E+P       LE
Sbjct: 448 IAYLANLPDFVIMAPSDEAELVNMIETARGIDDRPSAVRYPRGAGVGTEMP--ETPTALE 505

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG+RVA L  G  +     A+ +L + G+  T+ADARF KPLD  +I  LA+
Sbjct: 506 IGKGRIVAEGKRVAFLSLGPRLTEVHKAAEMLTAKGITPTIADARFAKPLDEDMILKLAR 565

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HEVLIT+EEG+IGGFGSHV Q LA++G+ D  +K+R +VLPD +ID  +P      AGL
Sbjct: 566 EHEVLITIEEGAIGGFGSHVAQLLAENGVFDSGLKFRSMVLPDTFIDQATPDQMYEVAGL 625

Query: 537 TPSHIAATVFNIL 549
           T   + A V + L
Sbjct: 626 TADDMVAKVMSAL 638


>gi|84515019|ref|ZP_01002382.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
 gi|84511178|gb|EAQ07632.1| deoxyxylulose-5-phosphate synthase [Loktanella vestfoldensis SKA53]
          Length = 644

 Score =  600 bits (1547), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/547 (56%), Positives = 390/547 (71%), Gaps = 13/547 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG  VGRDL     + +AVIGDG+
Sbjct: 94  IRTLRQEGGLSGFTKRSESEYDPFGAAHSSTSISAALGFTVGRDLGMPTGDAIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG     + VILNDN ++S+         PPVGA+S  LS L ++ PL
Sbjct: 154 ISAGMAYEAMNNAGSEGRRLFVILNDN-EMSIA--------PPVGAMSKYLSGLYAS-PL 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            +L ++A+G    + GP+ + A +  +   GM SG+  TLFE LG  YIGP+DGH++  L
Sbjct: 204 GDLHKMAEGFESVLPGPIRDHARRARQLVTGMQSGNTGTLFESLGFSYIGPIDGHDMSQL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L   K T+ TGPVLIHV T+KG+GY  AE++ADKYHGVAKF+ A+G+Q KS     S
Sbjct: 264 LPVLRAAK-TRATGPVLIHVCTKKGKGYAPAEQSADKYHGVAKFNVASGEQAKSRPNAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  AL  EA+ D  +VA+ AAM  GTG+++  +RF +R FDVG+AEQH VTFAAG+
Sbjct: 323 YTKIFGTALTVEAQHDPRIVAVTAAMPNGTGVDIMGQRFGSRVFDVGMAEQHGVTFAAGM 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADGPTH GSFD+ ++
Sbjct: 383 AASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGPTHAGSFDIGYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA  DE EL HMV TAAA D+ P  FRYPRG G+G++LP   +G  +E+GKG
Sbjct: 443 AALPNMVVMAAGDELELMHMVRTAAAYDEGPIAFRYPRGEGVGLDLP--ERGEIIEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G  VA+L +G  +  C  A+  LE+ G+ +T+ADARF KPLD ALIR L + H+ 
Sbjct: 501 RIVQQGSDVAILSFGAHLDECRKAARALETQGVSVTIADARFAKPLDRALIRQLLRHHKA 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE+G+ GGFG+ V+  LA DGLLDG  + R + LPDRYIDH +P    A+AGLT   
Sbjct: 561 LVTVEQGAQGGFGAMVLHDLANDGLLDGRCQVRTMTLPDRYIDHAAPDVMYAEAGLTAVD 620

Query: 541 IAATVFN 547
           IAAT   
Sbjct: 621 IAATAMQ 627


>gi|340030106|ref|ZP_08666169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus sp. TRP]
          Length = 641

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 309/550 (56%), Positives = 387/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES YD FG GHSSTSISA LG A+ R+L G   + VAVIGDGA
Sbjct: 99  IRTLRMEGGLSGFTKRSESPYDPFGAGHSSTSISAALGFAMARELGGDPGDAVAVIGDGA 158

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG L   + V+LNDN ++S+         PP GALS  L+RL +  P 
Sbjct: 159 MSAGMAFEALNNAGDLGKRLFVVLNDN-EMSIA--------PPTGALSRYLTRLYAEGPF 209

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++L+ VAKG    +  P+ E A +  E  +GM  G   TLFEELG  YIGPVDGH++D L
Sbjct: 210 QDLKAVAKGAVGFLPQPLQEGARRAKEMLKGMTVGG--TLFEELGFSYIGPVDGHDLDQL 267

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  V+  +  GPVLIHVVT KG+GY  AE+AADK H  AKFD  TG Q K+ +   S
Sbjct: 268 LPLLRTVR-ARADGPVLIHVVTRKGKGYAPAERAADKGHATAKFDVQTGAQAKAKSNAPS 326

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA+AL+ EA  D  +VA+ AAM  GTGLNLF  RFP RCFDVGIAEQHAVTF+AGL
Sbjct: 327 YTSVFAKALVDEASRDARIVAVTAAMPDGTGLNLFAERFPRRCFDVGIAEQHAVTFSAGL 386

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCA+YS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH G++D+ F+
Sbjct: 387 AAGGMKPFCALYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGAYDIAFL 446

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP MVVMA +DEAEL HMVATAAA D  P  FRYPRG G GVE+P    G  LE+GKG
Sbjct: 447 SNLPGMVVMAAADEAELVHMVATAAAYDAGPIAFRYPRGEGTGVEMP--EHGEVLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +GT +   + A   L   G++ T+ DARF KPLD  LI  LA +HE 
Sbjct: 505 RVVAEGRGVAILSFGTRLAEVMRAREALLVRGIQPTIVDARFAKPLDRDLILRLACTHEA 564

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGFGS V Q L+ +G+ DG +++R +VLPD +IDH SP     +A ++   
Sbjct: 565 LITIEEGAVGGFGSLVAQLLSDEGVFDGGLRFRQMVLPDTFIDHASPEAMYREARMSAPD 624

Query: 541 IAATVFNILG 550
           I A V  ILG
Sbjct: 625 IEAKVLEILG 634


>gi|126463555|ref|YP_001044669.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126105219|gb|ABN77897.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 637

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 306/550 (55%), Positives = 386/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YDCFG GHSSTSISA +G A  R++ G   + VAVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAAVGFAAAREMGGDTGDAVAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+N+ G+L + +IVILNDN ++S+         PPVGALSS LSRL +  P 
Sbjct: 154 MSAGMAFEALNHGGHLKNRVIVILNDN-EMSIA--------PPVGALSSYLSRLYAGAPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ +  AKG    +  P  E A +  E  + +  G   TLFEELG  Y+GP+DGH++D L
Sbjct: 205 QDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGG--TLFEELGFSYVGPIDGHDLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  VK  +   PVLIHV+T+KGRGY  AE A D+ H   KF+  TG Q K  +   S
Sbjct: 263 LPVLRTVKQ-RAHAPVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EAEVD+ + A+ AAM  GTGLNLF  RFP R FDVGIAEQHAVTF+A L
Sbjct: 322 YTKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAAL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G++PFCAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 382 AAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP +VVMA +DEAEL HMVATAAA D+ P  FRYPRG+G+GVE+P   KG+PL++G+G
Sbjct: 442 SNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMPA--KGVPLQIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG R+ALL +GT +     A+  L + G+  TVADARF KPLD  LI  LA  HE 
Sbjct: 500 RVVREGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFGSHV Q LA+ G+ D   ++R +VLPD +IDH S     A AGL  + 
Sbjct: 560 LITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAAD 619

Query: 541 IAATVFNILG 550
           I       LG
Sbjct: 620 IERKALETLG 629


>gi|330994689|ref|ZP_08318612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
 gi|329758330|gb|EGG74851.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
          Length = 663

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 314/573 (54%), Positives = 403/573 (70%), Gaps = 33/573 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 162

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+SS L
Sbjct: 163 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSSYL 213

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 214 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 271

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 272 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGEQ 331

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 332 KKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 391

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 392 HAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 451

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLP + +MAPS E EL HM ATA A D+ P   RYPRG G+G+ LP    
Sbjct: 452 AGSFDIAYLGCLPGITLMAPSTEVELMHMTATAIAFDEGPIGLRYPRGAGLGLALPAA-- 509

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L ++GL  TVADARF 
Sbjct: 510 GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPRLEHALKAADMLAAHGLSPTVADARFA 569

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGF S V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 570 KPIDTALVEQLARNHAVLITIEEGSVGGFASFVMTHLARTGLLD-RVRFRPMTLPDRFID 628

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG--QTRE 554
           H +   Q  +AGL  + I  T  + LG  Q+R+
Sbjct: 629 HNTQDAQYIEAGLDAASIVKTALSALGLPQSRQ 661


>gi|254462269|ref|ZP_05075685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           HTCC2083]
 gi|206678858|gb|EDZ43345.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 642

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 306/554 (55%), Positives = 387/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESVYDPFGAAHSSTSISAALGFAVARDLGGEAPGGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+++AG A+EAMNNAG+L   M VILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGSISAGMAFEAMNNAGHLKKRMFVILNDN-EMSIA--------PPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++L+  AKG    +  P  E A +  +  +GM  G   TLFE+LG  Y+GP+DGH+
Sbjct: 205 EEPFQDLKTAAKGAVSLLPEPFREGAKRAKDMLKGMTVGG--TLFEQLGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  V+ T+ TGPVLIHV+T+KG+GY  AE A DK H  AKFD  TG+Q KS +
Sbjct: 263 MDQLLPVLRTVQ-TRATGPVLIHVITKKGKGYAPAEAARDKGHATAKFDVLTGEQKKSPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FAE+L+ EA  D  + A+ AAM  GTGLN F  R+P+RCFDV IAEQH VTF
Sbjct: 322 NAPSYTKVFAESLLKEAAADDKICAVTAAMPDGTGLNQFAERYPSRCFDVAIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  G+KPFC +YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 382 SAALAAGGMKPFCTMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
             +++ LP   VMA +DEAEL HMVATA A D+ P  FR+PRG G+GVE+P   KGIPLE
Sbjct: 442 TAYLSNLPGFTVMAAADEAELVHMVATAVAHDEGPIAFRFPRGEGVGVEIP--EKGIPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG+ VA+L +GT ++    A   L + G+  ++A+ARF KPLD  LI  LA+
Sbjct: 500 IGKGRIIREGKGVAILSFGTRLKEVEDACDALAAKGITPSIANARFAKPLDRDLILQLAQ 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA++G+ D  +K+R +VLPD +ID  SP D  A A L
Sbjct: 560 DHESLITIEEGAVGGFGSHVAQLLAEEGVFDTGLKYRSMVLPDIFIDQSSPRDMYAVAKL 619

Query: 537 TPSHIAATVFNILG 550
               I A V + LG
Sbjct: 620 NAEDIEAKVLDTLG 633


>gi|399076032|ref|ZP_10751806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
 gi|398037908|gb|EJL31084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. AP07]
          Length = 638

 Score =  600 bits (1546), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 311/550 (56%), Positives = 388/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  H++TSISA LG    RD KG  N+V+AVIGDG+
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAALGFCAARDAKGESNSVIAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMN A      +IVILNDN  +S+         PPVG +S+ L+ L S    
Sbjct: 152 MSAGMAYEAMNAAVDTTKRLIVILNDN-DMSIA--------PPVGGMSAYLANLVSGGAY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R++R++ K V +++  P+ + A K +EYARGM++G   T FEELG +Y+GP+DGH++D L
Sbjct: 203 RKVRKLGKTVVEKLPSPIRDAARKAEEYARGMVTGG--TFFEELGFHYVGPIDGHDMDAL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V++L   K+     PVL+HVVT+KG+GY  AE A DK H V KFD  TG+Q K++A   S
Sbjct: 261 VSVLNNAKHFDEK-PVLVHVVTQKGKGYAPAEGADDKLHAVVKFDVVTGQQHKAAAGPPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ LI  A VD  +VAI AAM  GTGL+LF + +P R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFAQELIKHAAVDDKIVAITAAMPSGTGLDLFGKAYPHRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPF AIYS+F+QR YDQVVHDV +Q+LPVRFAMDRAGLVGADGPTH G+FD+ FM
Sbjct: 380 AADGMKPFAAIYSTFLQRGYDQVVHDVAIQRLPVRFAMDRAGLVGADGPTHAGTFDLGFM 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP MV+MA +DE EL HMVATA  IDDRPS FRYPRG G+G+ LP  +   PLE+GKG
Sbjct: 440 GALPGMVLMAAADELELAHMVATAVEIDDRPSAFRYPRGEGLGLTLP--DLAAPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA++  GT +  CL A+ LL + GL  TVADARF KPLD  ++  LA+ HE 
Sbjct: 498 RIVREGTSVAIVSLGTRLAECLKAADLLAARGLSATVADARFAKPLDVDMLLRLAREHEA 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEG++GGFG+ V+Q LAQ G LD  +K R LVLPD + D   P    AQAGL    
Sbjct: 558 IITVEEGAMGGFGAFVLQALAQHGALDRGLKIRTLVLPDIFQDQDKPDVMYAQAGLDAEG 617

Query: 541 IAATVFNILG 550
           I     + LG
Sbjct: 618 ILRGALSALG 627


>gi|338707067|ref|YP_004661268.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
 gi|336293871|gb|AEI36978.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
          Length = 649

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/561 (55%), Positives = 387/561 (68%), Gaps = 14/561 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L  +K+  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSHKKDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGERLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G TLFEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLAIAARKADEYARGM--ATGGTLFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAEDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAE LI EA+ D  +VAI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAERLIKEAQADDKIVAITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A    KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAHYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDEAEL  MV T A  D  P   RYPRGNGIGV LP   +   L +GKG
Sbjct: 442 VNLPNMVVMAPSDEAELSSMVHTMAQYDKGPISVRYPRGNGIGVTLPENPE--TLTIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L  G+ VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD  L R L K+H+V
Sbjct: 500 RLLRRGKTVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDETLTRHLLKTHKV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEG++GGF + V+   + +GL+D  +K R L LPDR+     P  Q A+AGL    
Sbjct: 560 IVTVEEGALGGFATQVLTMASDEGLMDEGLKIRTLRLPDRFQPQDKPEIQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSF 561
           I A V + L +  + +E++  
Sbjct: 620 IVAAVISALHRNAKPVELVEI 640


>gi|338708492|ref|YP_004662693.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
 gi|336295296|gb|AEI38403.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           pomaceae ATCC 29192]
          Length = 650

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/563 (55%), Positives = 388/563 (68%), Gaps = 14/563 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L  +K+  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSHKKDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGERLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G TLFEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLAIAARKADEYARGM--ATGGTLFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAEDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FAE LI EA+ D  +VAI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFAERLIKEAQADDKIVAITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A    KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAHYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDEAEL  MV T A  D  P   RYPRGNGIGV LP   +   L +GKG
Sbjct: 442 VNLPNMVVMAPSDEAELSSMVHTMAQYDKGPISVRYPRGNGIGVTLPENPE--TLTIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L  G+ VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD  L R L K+H+V
Sbjct: 500 RLLRRGKTVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDETLTRHLLKTHKV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEG++GGF + V+   + +GL+D  +K R L LPDR+     P  Q A+AGL    
Sbjct: 560 IVTVEEGALGGFATQVLTMASDEGLMDEGLKIRTLRLPDRFQPQDKPEIQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSFKS 563
           I A V + L +  + +E++   +
Sbjct: 620 IVAAVISALHRNAKPVELVEITA 642


>gi|254456404|ref|ZP_05069833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207083406|gb|EDZ60832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 638

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 291/559 (52%), Positives = 394/559 (70%), Gaps = 14/559 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GLSGFTKRSESEYD FG  HSSTSIS+ LG+A    L  + +NV+AVIGDGA
Sbjct: 92  IRTLRQGNGLSGFTKRSESEYDPFGAAHSSTSISSALGIAEANKLANKTSNVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG   + MIVILNDN  +S+          PVGA+ + L++L + +  
Sbjct: 152 ISAGMAYEAMNNAGASKTKMIVILNDN-DMSIA--------KPVGAMRTYLAKLFTGKIY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE  K +T          A K +++ R  ++G   TLF  LG YY GP+DGH+++DL
Sbjct: 203 FSFRETLKLITSAFSKRFSAKAGKAEDFLRSAVTGG--TLFSSLGFYYAGPIDGHDLNDL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+  +++K  GP++IHV T+KG+GY YAEKA D YHGV+KF+  TG+Q KS +   +
Sbjct: 261 IPILKNARDSKHEGPIMIHVKTQKGKGYSYAEKATDNYHGVSKFNVETGEQIKSISNLPA 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA  L+  A+ D  +V I AAM GGTG+++F + FP R FDVGIAEQHAVTF+AGL
Sbjct: 321 YTKVFANTLVKHAQKDSKIVGITAAMPGGTGMDIFGKEFPKRMFDVGIAEQHAVTFSAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KP+ AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 381 ATEGYKPYAAIYSTFLQRAYDQVVHDVAIQSLPVRFAIDRAGLVGADGSTHAGSFDITYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN +VMA SDEAEL  M+ T+  I+D+P   RYPRGNG+G+ELP  ++ I  E+GKG
Sbjct: 441 STLPNFIVMAASDEAELVKMINTSVDINDKPCAIRYPRGNGVGLELPSIDEKI--EIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G++  +L  GT ++ C  A+  L+S G+  T+ DARF KPLD  LI   A+ HEV
Sbjct: 499 RIIQQGKQACILSLGTRLEECKFAAEELKSKGVSTTIIDARFAKPLDRELILKCAREHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEGSIGGFGSHV   LA+ G+ D  +K+R + LPD +ID  +P +    AGL+ S 
Sbjct: 559 MITIEEGSIGGFGSHVKNLLAETGVFDKGLKFRSMTLPDSFIDQDTPKNMYELAGLSSSQ 618

Query: 541 IAATVFNILGQTREALEIM 559
           I+  + +IL  T+++++++
Sbjct: 619 ISKKILDIL-FTKDSIKVV 636


>gi|297605162|ref|NP_001056773.2| Os06g0142900 [Oryza sativa Japonica Group]
 gi|255676709|dbj|BAF18687.2| Os06g0142900 [Oryza sativa Japonica Group]
          Length = 562

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 298/522 (57%), Positives = 374/522 (71%), Gaps = 23/522 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT++Q  GLSGFT R ESEYD FG GH   S+SAGLGMAV RDL GRKN +V VI +  
Sbjct: 53  FHTIKQRKGLSGFTSRFESEYDPFGAGHGCNSLSAGLGMAVARDLGGRKNRIVTVISNWT 112

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
             AGQ YEAM +AG+LDS+M+VILND++   LP A     +  + ALSSALS++QS++  
Sbjct: 113 TMAGQVYEAMGHAGFLDSNMVVILNDSRHTLLPKADSQSKMS-INALSSALSKVQSSKGF 171

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ RE AKG++K  G  MHE AAK+DEYARGMI   G+TLFEELGLYYIGP+DG+N+DDL
Sbjct: 172 RKFREAAKGLSKWFGKGMHEFAAKIDEYARGMIGPHGATLFEELGLYYIGPIDGNNIDDL 231

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRG---------YPYAEKAADKYHGVAKFDPATGKQ 231
           + +L+EV    +TGPVL+HV+TE  +           P  E   D    + KF       
Sbjct: 232 ICVLKEVSTLDSTGPVLVHVITENEKDSGGEFNSEITPDEEGPPDSSQDILKF------- 284

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
              +  +++Y   F E+LIAEAE DK +V +H  MG    + LF  RFP R FD+GIAEQ
Sbjct: 285 -LENGLSRTYNDCFVESLIAEAENDKHIVVVHGGMGIDRSIQLFQSRFPDRFFDLGIAEQ 343

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTF+AGLAC GLKPFC I S+F+QRAYDQ+V DVD+QK+PVRFA+  AGLVG++GPT+
Sbjct: 344 HAVTFSAGLACGGLKPFCIIPSTFLQRAYDQIVEDVDMQKIPVRFAITSAGLVGSEGPTN 403

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE--LPPG 409
            G FD+TFM+CLPNM+VM+PS+E EL  MVATAA ++DRP CFRYP+G  +G    L  G
Sbjct: 404 SGPFDITFMSCLPNMIVMSPSNEDELIDMVATAAMVEDRPICFRYPKGAIVGTSGTLAYG 463

Query: 410 NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHA 469
           N   PLE+GKG IL EG+ +A LGYG  VQ CL A +LL + G++ TVA+ARFCKPLD  
Sbjct: 464 N---PLEIGKGEILAEGKEIAFLGYGDVVQRCLIARSLLFNFGIQATVANARFCKPLDID 520

Query: 470 LIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVK 511
           LIR L + H+ LITVEEG++GGFGSHV QF++ DGLLDG +K
Sbjct: 521 LIRMLCQQHDFLITVEEGTVGGFGSHVSQFISLDGLLDGKIK 562


>gi|119383154|ref|YP_914210.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
           PD1222]
 gi|119372921|gb|ABL68514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paracoccus denitrificans
           PD1222]
          Length = 640

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/550 (56%), Positives = 388/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES YD FG GHSSTSISA LG A+ R+L G   + +AVIGDGA
Sbjct: 98  IRTLRMEGGLSGFTKRSESPYDPFGAGHSSTSISAALGFAMARELGGDPGDAIAVIGDGA 157

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG L   + V+LNDN ++S+         PP GALS  L+RL +  P 
Sbjct: 158 MSAGMAFEALNNAGDLGKRLFVVLNDN-EMSIA--------PPTGALSRYLTRLYAEGPF 208

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++L+ VAKG    +   + E A +  E  +GM  G   TLFEELG  YIGPVDGH++D L
Sbjct: 209 QDLKAVAKGAVGFLPPTLQEGARRAKEMLKGMTVGG--TLFEELGFSYIGPVDGHDLDQL 266

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  VK  + TGPVL+HVVT KG+GY  AE+AADK H  AKFD  TG Q K+ +   S
Sbjct: 267 LPLLRTVK-ARATGPVLLHVVTRKGKGYGPAERAADKGHATAKFDVETGAQAKAKSNAPS 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA AL+ +A  D  +VA+ AAM  GTGLNL   RFP RCFDVGIAEQHAVTF+AGL
Sbjct: 326 YTSVFARALVDQASRDARIVAVTAAMPDGTGLNLMAERFPRRCFDVGIAEQHAVTFSAGL 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G++DV F+
Sbjct: 386 AAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAYDVAFL 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP MVVMA +DEAEL HMVATAAA D+ P  FRYPRG G GVE+P   +G  L +GKG
Sbjct: 446 ANLPGMVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGEGTGVEMP--ERGEVLVIGKG 503

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+ VA+L +GT +   + A   L + G+  TV DARF KPLD  LI  LA++HE 
Sbjct: 504 RVMAEGKGVAILSFGTRLSEVMRARESLAARGVSPTVVDARFAKPLDRDLILRLARTHEA 563

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG++GGFGS V Q LA +G+ DG +++R +VLPD +IDH SP     +A ++   
Sbjct: 564 LITIEEGAVGGFGSLVAQLLADEGVFDGGLRFRQMVLPDTFIDHASPEAMYREARMSAPD 623

Query: 541 IAATVFNILG 550
           I A V  +LG
Sbjct: 624 IEAKVLEVLG 633


>gi|77464715|ref|YP_354219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
 gi|119368196|sp|Q3IYR6.1|DXS2_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|77389133|gb|ABA80318.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
          Length = 637

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/550 (55%), Positives = 386/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YDCFG GHSSTSISA +G A  R++ G   + VAVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAAVGFAAAREMGGDTGDAVAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+N+ G+L + +IVILNDN ++S+         PPVGALSS LSRL +  P 
Sbjct: 154 MSAGMAFEALNHGGHLKNRVIVILNDN-EMSIA--------PPVGALSSYLSRLYAGAPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ +  AKG    +  P  E A +  E  + +  G   TLFEELG  Y+GP+DGH++D L
Sbjct: 205 QDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGG--TLFEELGFSYVGPIDGHDLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  VK  +   PVLIHV+T+KGRGY  AE A D+ H   KF+  TG Q K  +   S
Sbjct: 263 LPVLRTVKQ-RAHAPVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EAEVD+ + A+ AAM  GTGLNLF  RFP R FDVGIAEQHAVTF+A L
Sbjct: 322 YTKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAAL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G++PFCAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 382 AAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP +VVMA +DEAEL HMVATAAA D+ P  FRYPRG+G+GVE+P   KG+PL++G+G
Sbjct: 442 SNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMP--VKGVPLQIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG R+ALL +GT +     A+  L + G+  TVADARF KPLD  LI  LA  HE 
Sbjct: 500 RVVSEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFGSHV Q LA+ G+ D   ++R +VLPD +IDH S     A AGL  + 
Sbjct: 560 LITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAAD 619

Query: 541 IAATVFNILG 550
           I       LG
Sbjct: 620 IERKALETLG 629


>gi|110677932|ref|YP_680939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
 gi|118595488|sp|Q16CP0.1|DXS2_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|109454048|gb|ABG30253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
          Length = 642

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/554 (55%), Positives = 383/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R   GLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKGGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGVVPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG AYEAMNNAG+L   MIVILNDN ++S+         PP GA+SS LSRL S
Sbjct: 154 GDGSMSAGMAYEAMNNAGHLKKRMIVILNDN-EMSIA--------PPTGAMSSYLSRLYS 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++ +  AKG    +  P  E A +  +  +GM    G TLFEELG  YIGP+DGH+
Sbjct: 205 GEPFQDFKAAAKGAVSLLPEPFREGAKRAKDMLKGM--AVGGTLFEELGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGP++IH +T+KG+GY  AE A DK H  AKFD  TG+Q K+ +
Sbjct: 263 LDQLLPLLRTVK-ARATGPIMIHALTKKGKGYAPAETARDKGHATAKFDVLTGQQTKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA++L+ EA  D  + A+ AAM  GTGLNLF  RFP+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTKVFAQSLLEEATKDDKICAVTAAMPDGTGLNLFAERFPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 SAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++A LP  VVMA +DEAEL HMVATA A DD P  FR+PRG G GV++P    G  LE
Sbjct: 442 IAYLANLPGFVVMAAADEAELKHMVATAVAHDDGPIAFRFPRGEGNGVDMP--EVGEVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG RVA+L +GT +     A   L + G+  T+ADARF KPLD  +I  L  
Sbjct: 500 IGKGRIITEGTRVAILSFGTRLAEVQKAGEALAARGITPTIADARFAKPLDREMILDLVA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LITVEEG+IGGFGSHV Q L+ +G+ D   K+R +VLPD +ID  SPAD  A AG+
Sbjct: 560 NHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGM 619

Query: 537 TPSHIAATVFNILG 550
             + I   V ++LG
Sbjct: 620 NAADIETKVLSVLG 633


>gi|221640629|ref|YP_002526891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           KD131]
 gi|221161410|gb|ACM02390.1| 1-deoxy-D-xylulose-5-phosphate synthase 2 [Rhodobacter sphaeroides
           KD131]
          Length = 637

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/550 (55%), Positives = 386/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YDCFG GHSSTSISA +G A  R++ G   + VAVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAAVGFAAAREMGGDTGDAVAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+N+ G+L + +IVILNDN ++S+         PPVGALSS LSRL +  P 
Sbjct: 154 MSAGMAFEALNHGGHLKNRVIVILNDN-EMSIA--------PPVGALSSYLSRLYAGAPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ +  AKG    +  P  E A +  E  + +  G   TLFEELG  Y+GP+DGH++D L
Sbjct: 205 QDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGG--TLFEELGFSYVGPIDGHDLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  VK  +   PVLIHV+T+KGRGY  AE A D+ H   KF+  TG Q K  +   S
Sbjct: 263 LPVLRTVKQ-RAHAPVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EAEVD+ + A+ AAM  GTGLNLF  RFP R FDVGIAEQHAVTF+A L
Sbjct: 322 YTKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAAL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G++PFCAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 382 AAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP +VVMA +DEAEL HMVATAAA D+ P  FRYPRG+G+GVE+P   KG+PL++G+G
Sbjct: 442 SNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMP--VKGVPLQIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG R+ALL +GT +     A+  L + G+  TVADARF KPLD  LI  LA  HE 
Sbjct: 500 RVVREGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFGSHV Q LA+ G+ D   ++R +VLPD +IDH S     A AGL  + 
Sbjct: 560 LITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAAD 619

Query: 541 IAATVFNILG 550
           I       LG
Sbjct: 620 IERKALETLG 629


>gi|429207275|ref|ZP_19198534.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
 gi|428189650|gb|EKX58203.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
          Length = 637

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/550 (55%), Positives = 386/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YDCFG GHSSTSISA +G A  R++ G   + VAVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAAVGFAAAREMGGDTGDAVAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+N+ G+L + +IVILNDN ++S+         PPVGALSS LSRL +  P 
Sbjct: 154 MSAGMAFEALNHGGHLKNRVIVILNDN-EMSIA--------PPVGALSSYLSRLYAGAPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ +  AKG    +  P  E A +  E  + +  G   TLFEELG  Y+GP+DGH++D L
Sbjct: 205 QDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGG--TLFEELGFSYVGPIDGHDLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  VK  +   PVLIHV+T+KGRGY  AE A D+ H   KF+  TG Q K  +   S
Sbjct: 263 LPVLRTVKQ-RAHAPVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EAEVD+ + A+ AAM  GTGLNLF  RFP R FDVGIAEQHAVTF+A L
Sbjct: 322 YTKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAAL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G++PFCAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 382 AAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP +VVMA +DEAEL HMVATAAA D+ P  FRYPRG+G+GVE+P   +G+PL++G+G
Sbjct: 442 SNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMPA--RGVPLQIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG R+ALL +GT +     A+  L + G+  TVADARF KPLD  LI  LA  HE 
Sbjct: 500 RVVREGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFGSHV Q LA+ G+ D   ++R +VLPD +IDH S     A AGL  + 
Sbjct: 560 LITIEEGAIGGFGSHVAQLLAEAGIFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAAD 619

Query: 541 IAATVFNILG 550
           I       LG
Sbjct: 620 IERKALETLG 629


>gi|332559608|ref|ZP_08413930.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
 gi|332277320|gb|EGJ22635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
          Length = 637

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/550 (55%), Positives = 386/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSES YDCFG GHSSTSISA +G A  R++ G   + VAVIGDG+
Sbjct: 94  IRTLRQGGGLSGFTKRSESPYDCFGAGHSSTSISAAVGFAAAREMGGDTGDAVAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+N+ G+L + +IVILNDN ++S+         PPVGALSS LSRL +  P 
Sbjct: 154 MSAGMAFEALNHGGHLKNRVIVILNDN-EMSIA--------PPVGALSSYLSRLYAGAPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ +  AKG    +  P  E A +  E  + +  G   TLFEELG  Y+GP+DGH++D L
Sbjct: 205 QDFKAAAKGALGLLPEPFQEGARRAKEMLKSVTVGG--TLFEELGFSYVGPIDGHDLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  VK  +   PVLIHV+T+KGRGY  AE A D+ H   KF+  TG Q K  +   S
Sbjct: 263 LPVLRTVKQ-RAHAPVLIHVITKKGRGYAPAEAARDRGHATNKFNVLTGAQVKPVSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA++LI EAEVD+ + A+ AAM  GTGLNLF  RFP R FDVGIAEQHAVTF+A L
Sbjct: 322 YTKVFAQSLIKEAEVDERICAVTAAMPDGTGLNLFGERFPKRTFDVGIAEQHAVTFSAAL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G++PFCAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+
Sbjct: 382 AAGGMRPFCAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP +VVMA +DEAEL HMVATAAA D+ P  FRYPRG+G+GVE+P   KG+PL++G+G
Sbjct: 442 SNLPGIVVMAAADEAELVHMVATAAAHDEGPIAFRYPRGDGVGVEMP--VKGVPLQIGRG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG R+ALL +GT +     A+  L + G+  TVADARF KPLD  LI  LA  HE 
Sbjct: 500 RVVNEGTRIALLSFGTRLAEVQVAAEALAARGISPTVADARFAKPLDRDLILQLAAHHEA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+EEG+IGGFGSHV Q LA+ G+ D   ++R +VLPD +IDH S     A AGL  + 
Sbjct: 560 LITIEEGAIGGFGSHVAQLLAEAGVFDRGFRYRSMVLPDTFIDHNSAEVMYATAGLNAAD 619

Query: 541 IAATVFNILG 550
           I       LG
Sbjct: 620 IERKALETLG 629


>gi|84514695|ref|ZP_01002059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
           SKA53]
 gi|84511746|gb|EAQ08199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Loktanella vestfoldensis
           SKA53]
          Length = 637

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 302/545 (55%), Positives = 384/545 (70%), Gaps = 14/545 (2%)

Query: 9   GLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYE 68
           GLSGFTKRSES YD FG  HSSTSISA LG AV RDL G   + +A+IGDGA++AG AYE
Sbjct: 102 GLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGDPGDAIAIIGDGAISAGMAYE 161

Query: 69  AMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAK 128
           AMNNAG+L   +IVILNDN ++S+         PPVGA+SS LS+L +  P +E +  AK
Sbjct: 162 AMNNAGHLGKRLIVILNDN-EMSIA--------PPVGAMSSYLSQLYAGAPFQEFKAAAK 212

Query: 129 GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVK 188
           G    +  P  E A +  +  + M  G   TLFE+LG  Y+GP+DGH++D L+++L  VK
Sbjct: 213 GAVSLLPEPFREGAKRAKDVLKHMTVGG--TLFEQLGFSYVGPIDGHDMDQLLSVLRTVK 270

Query: 189 NTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEA 248
             +  GP+LIH +T+KG+GY  AE A+DK H  AKFD  TGKQ K+ +   SYT+ FAE+
Sbjct: 271 -ARADGPILIHAITKKGKGYAPAESASDKGHATAKFDLVTGKQAKAPSNAPSYTSVFAES 329

Query: 249 LIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPF 308
           L+  A  D  + A+ AAM  GTGL+ F+ R+ +RCFDVGIAEQHAVTF+AGLA  G++PF
Sbjct: 330 LLKHAAADPRICAVTAAMPDGTGLSKFMERYASRCFDVGIAEQHAVTFSAGLAAGGMRPF 389

Query: 309 CAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVV 368
           CAIYS+F+QR YDQ+VHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV F+A LP  VV
Sbjct: 390 CAIYSTFLQRGYDQIVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVAFLANLPGFVV 449

Query: 369 MAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER 428
           MA +DEAEL  MVATAAA D+ P  FR+PRG G+GVE+P      PLE+GKGR++ EG +
Sbjct: 450 MAAADEAELVRMVATAAAYDEGPIAFRFPRGEGVGVEIP--QDATPLEIGKGRMIREGAQ 507

Query: 429 VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS 488
           VA+L +GT +   + A   LE+ G++ TVADARF KPLD  LI  LA  H+ LITVEEG+
Sbjct: 508 VAILSFGTRLSEVMKACETLEAKGIKPTVADARFAKPLDRDLILQLAAGHDALITVEEGA 567

Query: 489 IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNI 548
           +GGFGSHV Q LA +G+ D  +++R +VLPD +ID  SP      AG+  +HI A V   
Sbjct: 568 VGGFGSHVGQLLADEGVFDHGLRFRSMVLPDTFIDQASPKAMYDVAGMNAAHIEAKVLEA 627

Query: 549 LGQTR 553
           LG  R
Sbjct: 628 LGIAR 632


>gi|149914239|ref|ZP_01902770.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
 gi|149811758|gb|EDM71591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. AzwK-3b]
          Length = 642

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/537 (57%), Positives = 385/537 (71%), Gaps = 14/537 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AVGRD+     + +AVIGDG+
Sbjct: 95  IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVGRDMGQATGDAIAVIGDGS 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG+    + VILNDN ++S+         PPVGA+SS LSRL +N PL
Sbjct: 155 ISAGMAYEAMNNAGHEGRRLFVILNDN-EMSI--------APPVGAMSSYLSRLYANEPL 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +  +A+G    +  PM E A +  +   G+ +GSG TLFEELG  Y+GP+DGH++D L
Sbjct: 206 ARMASLAEGFEAAMPAPMREGAKRARQLVTGL-TGSG-TLFEELGFEYVGPIDGHDMDQL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L   + T+ TGPVLIH  T KG+GY  AE ++DKYHGVAKFD ATG Q KSS  T S
Sbjct: 264 LPVLRAAR-TRATGPVLIHCCTVKGKGYAPAETSSDKYHGVAKFDVATGTQTKSSGGTPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F ++L  EA  D D+VA+ AAM  GTGL++   RFP R FDVGIAEQHAVTFAAG+
Sbjct: 323 YTSIFGQSLTEEAARDPDIVAVTAAMPSGTGLDVMAARFPARVFDVGIAEQHAVTFAAGM 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYS+F+QR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 383 AASGLKPFCAIYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIGYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP   VMA +DEAEL HMVATAAA D  P  FRYPRG+G+GVE+P   +G  L++GKG
Sbjct: 443 SSLPGFTVMAAADEAELKHMVATAAAHDAGPIAFRYPRGSGMGVEIP--ERGQVLKIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L EG  VA+L YG  +  C+ A  LLE  GL +T+ADARF KPLD  L+  LA+ H  
Sbjct: 501 RVLREGTDVAILSYGAHLAECIEAVDLLEREGLSVTLADARFAKPLDTELVMQLAEKHRA 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           LITVE+G+ GGFGS V+  LA++G  D  +  R + LPDR+ID  SPAD  A AG+T
Sbjct: 561 LITVEQGAEGGFGSIVMHALAREGGFDRGLAMRNVCLPDRFIDQASPADMYADAGMT 617


>gi|330991812|ref|ZP_08315761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
 gi|329760833|gb|EGG77328.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter sp.
           SXCC-1]
          Length = 652

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 312/567 (55%), Positives = 398/567 (70%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 82  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 141

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+SS L
Sbjct: 142 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSSYL 192

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 193 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 250

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 251 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGEQ 310

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 311 KKGPSGPPSYTSVFAKELVRQAATDDKIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 370

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 371 HAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 430

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLP + +MAPS E EL HM ATA A D+ P   RYPRG G+G+ LP    
Sbjct: 431 AGSFDIAYLGCLPGITLMAPSTEVELMHMTATAIAFDEGPIGLRYPRGAGLGLALPAA-- 488

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L ++GL  TVADARF 
Sbjct: 489 GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPRLEHALKAADMLAAHGLSPTVADARFA 548

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGF S V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 549 KPIDTALVEQLARNHAVLITIEEGSVGGFASFVMTHLARTGLLD-RVRFRPMTLPDRFID 607

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H +   Q  +AGL  + I  T    LG
Sbjct: 608 HNTQDAQYIEAGLDAAAITNTALEALG 634


>gi|347759880|ref|YP_004867441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
 gi|347578850|dbj|BAK83071.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
          Length = 663

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 313/573 (54%), Positives = 403/573 (70%), Gaps = 33/573 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPAYRERNVIA 162

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 163 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 213

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 214 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 271

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 272 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYTPAESAGDKYHAVSKFNVVTGEQ 331

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 332 KKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 391

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 392 HAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 451

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLP + +MAPS E EL HM ATA A D+ P   RYPRG G+G+ LP    
Sbjct: 452 AGSFDIAYLGCLPGITLMAPSTEVELMHMTATAIAFDEGPIGLRYPRGAGLGLALPAA-- 509

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L ++GL  TVADARF 
Sbjct: 510 GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPRLEHALKAADMLAAHGLSPTVADARFA 569

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGF S V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 570 KPIDTALVEQLARNHAVLITIEEGSVGGFASFVMTHLAKTGLLD-RVRFRPMTLPDRFID 628

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG--QTRE 554
           H +   Q  +AGL  + I  T  + LG  Q+R+
Sbjct: 629 HNTQDAQYIEAGLDAAAIVDTALSALGLPQSRQ 661


>gi|219114431|ref|XP_002176386.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
           [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402632|gb|EEC42622.1| precursor of synthase DXS 1-deoxy-d-xylulose-5-phosphate synthase
           [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 730

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/584 (53%), Positives = 398/584 (68%), Gaps = 40/584 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRD-LKGRKNNVVAVIGDG 59
           M T+RQ+ G+SGF KR ESEYD FG GHSSTSIS   GM++G+  L  R+NN +AVIGDG
Sbjct: 140 MSTLRQSGGISGFCKRKESEYDSFGAGHSSTSISVAQGMSIGKSILNKRQNNCIAVIGDG 199

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNR 118
           A+T G AYEAMN+AGYL + MIVILNDN QVSLPT T   G I P   LS+  S L  ++
Sbjct: 200 AITGGMAYEAMNSAGYLKNRMIVILNDNGQVSLPTGTPSAGGIVPASQLSTYTSNLLVSK 259

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
           P ++ R  AK   K +   + ++  ++DEYARG+++G   TLFEELG +Y+GPVDGH++D
Sbjct: 260 PFQDFRMFAKNFNKLLPEGVQDVNKRIDEYARGIVAGG--TLFEELGFFYVGPVDGHDLD 317

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +L+ ILE+++++ +T PVL+HV T KG GYP AE+A+D+ HGVAKF+  TGKQ KS    
Sbjct: 318 NLIPILEKLRDSPSTKPVLLHVKTTKGYGYPPAEQASDRMHGVAKFNLGTGKQIKSKKPI 377

Query: 239 Q-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             S T+ FA ALI  A  D+ +V I AAM GGTG+++F RRFP R FDVGIAEQHAVT  
Sbjct: 378 APSLTSIFANALIDAATEDRSIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTMG 437

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AG+ACEGLKPF  IYS+FMQR YDQVVHDV +Q LPVR  +DRAGLVG DGPTH G +D+
Sbjct: 438 AGMACEGLKPFVCIYSTFMQRGYDQVVHDVAIQNLPVRMVLDRAGLVGNDGPTHHGCYDL 497

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV------------- 404
           ++M C+PN+++MAPSDE EL +MVAT AA +D P+  RYPRG G G+             
Sbjct: 498 SYMGCIPNLIIMAPSDEVELRNMVATQAAFNDGPTVLRYPRGTGYGLETLKNTFGYTFEG 557

Query: 405 -ELPPGNKGIPLEVGKGRIL----------------IEGERVALLGYGTAVQSCLAASAL 447
            E+P   KG  L +GKGRI+                   +RVA+L  GT +   L A+  
Sbjct: 558 DEIP--TKGEVLPIGKGRIVRRPGGFNQNQSSTRGKSRKDRVAVLSLGTRLHEALVAAKE 615

Query: 448 LE--SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGL 505
           +E     L +TVAD RF KPLD  L+R LA  H VLIT+EEGSIGGFG HV+ FL+ DG+
Sbjct: 616 VEDIDPTLGVTVADGRFMKPLDVDLVRELADEHSVLITIEEGSIGGFGDHVLHFLSLDGI 675

Query: 506 L-DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNI 548
           L DG +K+RP+V+PD   + G+  +Q  QAGL   HI  T+  +
Sbjct: 676 LDDGELKFRPMVIPDTLFEAGTQYEQYEQAGLNSEHIRGTILRL 719


>gi|339505498|ref|YP_004692918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
           149]
 gi|338759491|gb|AEI95955.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
           Och 149]
          Length = 642

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/554 (55%), Positives = 384/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R   GLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKGGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGVVPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG AYEAMNNAG+L   MIVILNDN ++S+         PP GA+SS LSRL S
Sbjct: 154 GDGSMSAGMAYEAMNNAGHLKKRMIVILNDN-EMSIA--------PPTGAMSSYLSRLYS 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++ +  AKG    +  P  E A +  +  +GM    G TLFEELG  YIGP+DGH+
Sbjct: 205 GEPFQDFKAAAKGAVSLLPEPFREGAKRAKDMLKGM--AVGGTLFEELGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGP++IH +T+KG+GY  AE A DK H  AKFD  TG+Q K+ +
Sbjct: 263 LDQLLPLLRTVK-ARATGPIMIHALTKKGKGYAPAETARDKGHATAKFDVLTGQQTKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  FA++L+ EA  D  + A+ AAM  GTGLNLF  R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTKVFAQSLLEEAMKDDKICAVTAAMPDGTGLNLFAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +A LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 SAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++A LP  VVMA +DEAEL HMVATA A DD P  FR+PRG G GV++P    G  LE
Sbjct: 442 IAYLANLPGFVVMAAADEAELKHMVATAVAHDDGPIAFRFPRGEGNGVDMP--EVGEVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG RVA+L +GT +     A   L + G+  T+ADARF KPLD  +I  LA 
Sbjct: 500 IGKGRIITEGARVAILSFGTRLAEVQKAGEALAARGITPTIADARFAKPLDRDMILDLAV 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LITVEEG+IGGFGSHV Q L+ +G+ D   K+R +VLPD +ID  SPAD  A AG+
Sbjct: 560 NHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKFRSMVLPDIFIDQSSPADMYAVAGM 619

Query: 537 TPSHIAATVFNILG 550
             + I   V ++LG
Sbjct: 620 NAADIETKVLSVLG 633


>gi|167647276|ref|YP_001684939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter sp. K31]
 gi|254782067|sp|B0T3X7.1|DXS_CAUSK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|167349706|gb|ABZ72441.1| deoxyxylulose-5-phosphate synthase [Caulobacter sp. K31]
          Length = 638

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/550 (56%), Positives = 389/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ES YD FG  H++TSISA LG    RD KG  N+V+AVIGDG+
Sbjct: 92  IKTLRQGGGLSGFTKRAESVYDPFGAAHAATSISAALGFCAARDAKGENNSVIAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMN A      +IVILNDN  +S+         PPVG +S+ L+ L S    
Sbjct: 152 MSAGMAYEAMNAAVDTTKRLIVILNDN-DMSIA--------PPVGGMSAYLANLVSGGAY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R++R++ K V +++  P+ + A K +EYARGM++G   T FEELG +Y+GP+DGH++D L
Sbjct: 203 RKVRKLGKTVVEKLPTPIRDAARKAEEYARGMVTGG--TFFEELGFHYVGPIDGHDMDAL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V++L  VK+     PVL+HVVT+KG+GY  AE AADK H V KFD  TG+Q K++A   S
Sbjct: 261 VSVLNNVKHFDEK-PVLVHVVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQHKAAAGPPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ LI  A VD  ++AI AAM  GTGL+LF + +P R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFAQELIKHAAVDDKIMAITAAMPSGTGLDLFGKAYPERTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPF AIYS+F+QR YDQVVHDV +Q+LPVRFAMDRAGLVGADGPTH G+FD+ FM
Sbjct: 380 AADGMKPFVAIYSTFLQRGYDQVVHDVAIQRLPVRFAMDRAGLVGADGPTHAGTFDLGFM 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP MV+MA +DE EL HMV+TA AIDDRPS FRYPRG G+G+ +P  +   PLE+GKG
Sbjct: 440 GALPGMVLMAAADEVELAHMVSTAVAIDDRPSAFRYPRGEGLGLTIP--DLAAPLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA++  GT +  CL A+ LL + GL  TVADARF KPLD  ++  LA+ HE 
Sbjct: 498 RIVREGTSVAIVSLGTRLAECLKAADLLAARGLSATVADARFAKPLDVDMLLRLAREHEA 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVEEG++GGFG+ V+Q LA  G LD  +K R LVLPD + D   P    AQAGL    
Sbjct: 558 IITVEEGAMGGFGAFVLQALATHGALDRGLKIRTLVLPDVFQDQDKPDLMYAQAGLDAEG 617

Query: 541 IAATVFNILG 550
           I     + LG
Sbjct: 618 ILRGALSALG 627


>gi|254476395|ref|ZP_05089781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
 gi|214030638|gb|EEB71473.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. R11]
          Length = 642

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 307/556 (55%), Positives = 385/556 (69%), Gaps = 22/556 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+R  DGLSGFTKRSES +D FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPFDPFGAAHSSTSISAALGFAVARDLGGVIPEGNGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSI--------APPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+ VAKG    +  P  E A +  +  +GM    G TLFE LG  Y+GP+DGH+
Sbjct: 205 EEPFQELKAVAKGAASLLPEPFREGAKRAKDMLKGM--AVGGTLFESLGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGP+LIHV+T+KG+GY  AE+A DK H  AKFD  TG+Q K+ +
Sbjct: 263 MDQLLPVLRTVK-ARATGPILIHVLTKKGKGYAPAERARDKGHATAKFDMVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  F + L+  A  D  + A+ AAM  GTGLNL   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPSYTAVFGKELVRLAAEDDKICAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP-- 414
           + +MA LP MVVMA +DEAEL HM ATAAA DD P  FRYPRG G GV++P     +P  
Sbjct: 442 IAYMANLPGMVVMAAADEAELVHMTATAAAYDDGPIAFRYPRGEGEGVDMPE----VPEV 497

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+GKGR++  G+RVA+L +GT +     A+  L + G+  T+ADARF KPLD  +I  L
Sbjct: 498 LEIGKGRMIQNGKRVAILSFGTRLGEVKKAAEALSAKGITPTIADARFAKPLDRDMILKL 557

Query: 475 AKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           A  HE LIT+EEG++GGFGSHV Q LA++G+ D  +K+R +VLPD +ID  SPAD    A
Sbjct: 558 AADHEALITIEEGAVGGFGSHVAQLLAEEGVFDSGLKFRSMVLPDTFIDQASPADMYEIA 617

Query: 535 GLTPSHIAATVFNILG 550
            +    I A V  +LG
Sbjct: 618 AMNAPQIEAKVLEVLG 633


>gi|347760612|ref|YP_004868173.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
 gi|347579582|dbj|BAK83803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter xylinus
           NBRC 3288]
          Length = 671

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 311/567 (54%), Positives = 398/567 (70%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 101 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPAYRERNVIA 160

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 161 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 211

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 212 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 269

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 270 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYTPAESAGDKYHAVSKFNVVTGEQ 329

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 330 KKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 389

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYSSF+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 390 HAVTFAAGMATEGLRPFCAIYSSFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 449

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLP + +MAPS E EL HM ATA A D+ P   RYPRG G+G+ LP    
Sbjct: 450 AGSFDIAYLGCLPGITLMAPSTEVELMHMTATAIAFDEGPIGLRYPRGAGLGLALPAA-- 507

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L ++GL  TVADARF 
Sbjct: 508 GEVLEIGRGRIVREMARQSGPEQGGIAILSLGPRLEHALKAADMLAAHGLSPTVADARFA 567

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGF S V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 568 KPIDTALVEQLARNHAVLITIEEGSVGGFASFVMTHLAKTGLLD-RVRFRPMTLPDRFID 626

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H +   Q  +AGL  + I  T    LG
Sbjct: 627 HNTQDAQYIEAGLDAAAITNTALEALG 653


>gi|399994532|ref|YP_006574772.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phaeobacter gallaeciensis
           DSM 17395 = CIP 105210]
 gi|398659087|gb|AFO93053.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
          Length = 642

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/554 (55%), Positives = 385/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R  DGLSGFTKRSES +D FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPFDPFGAAHSSTSISAALGFAVARDLGGVVPEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSI--------APPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+ VAKG    +  P  E A +  +  +GM    G TLFE LG  Y+GP+DGH+
Sbjct: 205 EEPFQELKAVAKGAASLLPEPFREGAKRAKDMLKGM--AVGGTLFESLGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGP+LIHV+T+KG+GY  AE A DK H  AKFD  TG+Q K+ +
Sbjct: 263 MDQLLPVLRTVK-ARATGPILIHVLTKKGKGYAPAEAARDKGHATAKFDMVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L+  A  D  + A+ AAM  GTGL+L   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFGKELVRLAAEDDKICAVTAAMPDGTGLSLMAERYPSRTFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + +MA LP MVVMA +DEAEL HM ATAAA DD P  FRYPRG G GV++P   +   LE
Sbjct: 442 IAYMANLPGMVVMAAADEAELAHMTATAAAYDDGPIAFRYPRGEGEGVDMPEAPE--VLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ EG+RVA+L +GT +     A+  L + G+  T+ADARF KPLD  +I  LA 
Sbjct: 500 IGKGRMIQEGKRVAILSFGTRLGEVRKAAEALSARGITPTIADARFAKPLDRDMILKLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA++G+ D  +K+R +VLPD +ID  SPAD    A +
Sbjct: 560 DHEALITIEEGAVGGFGSHVAQLLAEEGIFDSGLKYRSMVLPDTFIDQASPADMYNVAAM 619

Query: 537 TPSHIAATVFNILG 550
               I A V  +LG
Sbjct: 620 NAPQIEAKVLEVLG 633


>gi|220926882|ref|YP_002502184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
           ORS 2060]
 gi|219951489|gb|ACL61881.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
           2060]
          Length = 654

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 320/567 (56%), Positives = 397/567 (70%), Gaps = 26/567 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----------KN 50
           + T+RQ  GLSGFTKR+ES YD FG  HSSTSISAGLGMA+ RDL             + 
Sbjct: 93  IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAIARDLAEAAARARGETPARR 152

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           NVVAVIGDG+++AG AYEAMNNAG L S +IVILNDN              PPVGA+S+ 
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLIVILNDNDM---------SIAPPVGAMSAY 203

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    R LR+ AK   + +   +++ AA+ +EYARG+++G G T+FEELG +Y+G
Sbjct: 204 LARLVSGDTYRSLRDTAKQFGRLLPKALYDTAARAEEYARGILAGGG-TMFEELGFHYVG 262

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           P+DGHN+D L+ +L+ V++    GPVL+HVVT+KG+GY  AE AAD+ H V KFD  +G+
Sbjct: 263 PIDGHNLDHLLPVLKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVLSGQ 321

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     SYT  F E+L+  A  D+ VVAI AAM  GTG+++F +  P R FDVGIAE
Sbjct: 322 QVKAKPNAPSYTRVFGESLVKAAAADETVVAITAAMPSGTGVDIFAKAHPERTFDVGIAE 381

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG T
Sbjct: 382 QHAVTFAAGLAAEGFRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFALDRAGLVGADGAT 441

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPN+ VMA +DEAEL HMVATA A D  P   RYPRG G+GV+LP   
Sbjct: 442 HAGAFDLAYLCCLPNLTVMAAADEAELVHMVATAHAHDAGPIALRYPRGEGVGVDLP--E 499

Query: 411 KGIPLEVGKGRILIE--GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           +G  L +GKGR+L    G RVALL  GT +   L A+  LE +G+ +TVADARF KPLD 
Sbjct: 500 RGEVLAIGKGRVLRRPPGARVALLSLGTRLAEALKAADRLEESGIGVTVADARFAKPLDE 559

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
           ALI  LA SHEVL+T+EEGS GGFG+ V+  LA  G LD GTV+ R L LPD Y DH SP
Sbjct: 560 ALILDLAGSHEVLVTLEEGSTGGFGAMVLHLLAARGALDAGTVRVRTLTLPDVYQDHDSP 619

Query: 528 ADQLAQAGLTPSHIAATVFNILGQTRE 554
               AQAGL    I  TV ++L + R+
Sbjct: 620 ERMYAQAGLDAPAIVRTVTDLLPEERK 646


>gi|94496312|ref|ZP_01302889.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
 gi|94424058|gb|EAT09082.1| deoxyxylulose-5-phosphate synthase [Sphingomonas sp. SKA58]
          Length = 639

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/549 (56%), Positives = 384/549 (69%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ES+YD FG  HSSTSISA LG A+   ++ +    +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTRRAESDYDPFGAAHSSTSISAALGFAIANKMQDKPGKAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+RL S+R  
Sbjct: 154 MSAGMAYEAMNNARDAGNRLVVILNDN-DMSI--------APPVGGLSAYLARLVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++A+ + +++  P+H  A K DE+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGLRDLARKLARKLPRPLHNAARKTDEFARGM--AMGGTLFEELGFYYVGPIDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GP L+HVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 263 IPVLENVRDA-AQGPCLVHVVTQKGKGYAPAEAAADKYHGVQKFDVITGTQDKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEA+ D  V AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTNVFAKALIAEAQRDPAVCAITAAMPSGTGLDKFQAAFPDRIFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HMV T A  D  P   RYPRGNG G+ LP   +   LE+GKG
Sbjct: 442 ATLPNMVVMAAADEAELVHMVRTCAIHDSGPIAVRYPRGNGTGIPLPEQPQA--LEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  GT ++  + A+  LE+ GL  TVAD RF KPLD ALIR L  +H+V
Sbjct: 500 RIVREGRQVAILSLGTRLEEAMKAADALEAKGLSTTVADLRFAKPLDEALIRKLLTTHDV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEG++GG G+HV+   +  GL+D  +K R L LPD + D   P  Q A A L    
Sbjct: 560 AVTIEEGAVGGLGAHVLTLASDLGLIDNGLKLRTLRLPDLFQDQDKPEKQYAMARLDADG 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IIDTVLTAL 628


>gi|397675987|ref|YP_006517525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
 gi|395396676|gb|AFN56003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
          Length = 649

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 308/561 (54%), Positives = 386/561 (68%), Gaps = 14/561 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L    +  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G T FEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLATAARKADEYARGM--ATGGTFFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E LI EA+ D  +V I AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDIAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDE EL +MV T A  D  P   RYPRGNG+GV L  G K I L +GKG
Sbjct: 442 VNLPNMVVMAPSDEGELANMVHTMAHYDQGPISVRYPRGNGVGVSL-EGEKEI-LPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G++VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD AL R L KSH+V
Sbjct: 500 RLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEG++GGF + V+   + +GL+D  +K R L LPDR+        Q A+AGL    
Sbjct: 560 IITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSF 561
           I A V + L +  + +E++  
Sbjct: 620 IVAAVISALHRNSKPVEVVEM 640


>gi|99082760|ref|YP_614914.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
 gi|118595619|sp|Q1GCG4.1|DXS_SILST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|99039040|gb|ABF65652.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Ruegeria sp. TM1040]
          Length = 645

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 310/557 (55%), Positives = 382/557 (68%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+R  DGLSGFTKRSES +D FG  HSSTSISA LG +V RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESAFDPFGAAHSSTSISAALGFSVARDLGGVTEEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGAMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSIA--------PPVGALSSYLSRLYT 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P  +L+  AKG    +  P  E A +  +  +GM    G TLFE LG  YIGP+DGH+
Sbjct: 205 EAPFHDLKAAAKGAVSLLPEPFREGAKRAKDMLKGM--AMGGTLFESLGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  +  GP+LIH VT+KG+GY  AE A DK H  AKFD  TG+Q K+ +
Sbjct: 263 MDQLLPVLRTVK-ARAAGPILIHAVTKKGKGYRPAEVARDKGHATAKFDMVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L   A  D  + A+ AAM  GTGLNL   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFGKTLTDLAAQDSKICAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + FMA LP MVVMA +DEAEL HMVATAAA D  P  FRYPRG G GVE+P   +   LE
Sbjct: 442 IAFMANLPGMVVMAAADEAELKHMVATAAAYDAGPIAFRYPRGEGEGVEMP--EQPEVLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG RVALL +GT +     A+  L + G+  TVADARF KPLD  +I SLA+
Sbjct: 500 IGKGRIIEEGSRVALLSFGTRLGEVRKAAEALAARGITPTVADARFAKPLDRDMILSLAE 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q L+++ + D  +K+R +VLPD +ID  SP D    A +
Sbjct: 560 KHEALITIEEGAVGGFGSHVAQLLSEEAVFDTGLKFRSMVLPDTFIDQASPKDMYDSAAM 619

Query: 537 TPSHIAATVFNILGQTR 553
              HI A V ++LG  R
Sbjct: 620 NAEHIEAKVLDVLGVAR 636


>gi|162147644|ref|YP_001602105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209542273|ref|YP_002274502.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786221|emb|CAP55803.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529950|gb|ACI49887.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 667

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 314/567 (55%), Positives = 397/567 (70%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+R ESEYD FG  HSSTSISAGLGMAV   L+       R+ NVVA
Sbjct: 107 IRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSISAGLGMAVAHHLRAEHDPAYRERNVVA 166

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G     +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 167 VIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLNDN-EMSI--------APPVGAMSNYL 217

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V +++   +   A K DEYARGMI+G   TLFEELG YY+GP
Sbjct: 218 SRLMSSRQFLGLRDLAGKVARRLPERLERTAKKADEYARGMITGG--TLFEELGFYYVGP 275

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++    GP+L+H++TEKGRGY  AE A DKYH VAKF+  TG+Q
Sbjct: 276 VDGHDLNQLVPILRNLRDADDKGPILLHILTEKGRGYRPAESAGDKYHAVAKFNVVTGEQ 335

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+     SYT+ F+  L+  A+ D  +VA+ AAM  GTGL+ F R  P R FDVGIAEQ
Sbjct: 336 KKAPPGPPSYTSVFSRELVRRAKQDDTIVAVTAAMPSGTGLDAFARACPDRFFDVGIAEQ 395

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 396 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQNLPVRFAIDRAGLVGADGATH 455

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPSDE EL HM ATA A D  P   RYPRGNG+G+ LP    
Sbjct: 456 AGAFDINYLGCLPGMTIMAPSDELELLHMTATACAFDAGPIALRYPRGNGLGLALP--EA 513

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  GT +   L A+ +L + GL  TVADARF 
Sbjct: 514 GEILEIGRGRIIREMGRQSGRETGGIAILSLGTRLAEVLKAADMLAAQGLAPTVADARFA 573

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KPLD ALI +LA++H VL+T+E+G+ GGFG++V+  LA+ GLLD T+++RP+ LPDR+ID
Sbjct: 574 KPLDTALIENLARNHAVLLTIEDGAEGGFGAYVMHHLARTGLLD-TIRFRPMTLPDRFID 632

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H +   Q  QAGL    IAA     LG
Sbjct: 633 HNTQDAQYHQAGLDAPAIAACAMQALG 659


>gi|397677362|ref|YP_006518900.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
 gi|395398051|gb|AFN57378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 29191]
          Length = 650

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 308/563 (54%), Positives = 386/563 (68%), Gaps = 14/563 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L    +  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G T FEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLATAARKADEYARGM--ATGGTFFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E LI EA+ D  +V I AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDIAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDE EL +MV T A  D  P   RYPRGNG+GV L  G K I L +GKG
Sbjct: 442 VNLPNMVVMAPSDEGELANMVHTMAHYDQGPISVRYPRGNGVGVSL-EGEKEI-LPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G++VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD AL R L KSH+V
Sbjct: 500 RLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEG++GGF + V+   + +GL+D  +K R L LPDR+        Q A+AGL    
Sbjct: 560 IITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSFKS 563
           I A V   L +  + +E++   +
Sbjct: 620 IVAAVTAALQRNSKPVEVVELTT 642


>gi|209543457|ref|YP_002275686.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531134|gb|ACI51071.1| deoxyxylulose-5-phosphate synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 704

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 314/567 (55%), Positives = 397/567 (70%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+R ESEYD FG  HSSTSISAGLGMAV   L+       R+ NVVA
Sbjct: 134 IRTLRQPGGLSGFTRRCESEYDPFGAAHSSTSISAGLGMAVAHHLRAEHDPAYRERNVVA 193

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G     +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 194 VIGDGSISAGMAYEAMNNASVAGPGAGRLIVVLNDN-EMSI--------APPVGAMSNYL 244

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A  V +++   +   A K DEYARGMI+G   TLFEELG YY+GP
Sbjct: 245 SRLMSSRQFLGLRDLAGKVARRLPERLERTAKKADEYARGMITGG--TLFEELGFYYVGP 302

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++    GP+L+H++TEKGRGY  AE A DKYH VAKF+  TG+Q
Sbjct: 303 VDGHDLNQLVPILRNLRDADDKGPILLHILTEKGRGYRPAESAGDKYHAVAKFNVVTGEQ 362

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+     SYT+ F+  L+  A+ D  +VA+ AAM  GTGL+ F R  P R FDVGIAEQ
Sbjct: 363 KKAPPGPPSYTSVFSRELVRRAKQDDTLVAVTAAMPSGTGLDAFARACPDRFFDVGIAEQ 422

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQ LPVRFA+DRAGLVGADG TH
Sbjct: 423 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQNLPVRFAIDRAGLVGADGATH 482

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPSDE EL HM ATA A D  P   RYPRGNG+G+ LP    
Sbjct: 483 AGAFDINYLGCLPGMTIMAPSDELELLHMTATACAFDAGPIALRYPRGNGLGLALP--EA 540

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  GT +   L A+ +L + GL  TVADARF 
Sbjct: 541 GEILEIGRGRIIREMGRQSGRETGGIAILSLGTRLAEVLKAADMLAAQGLAPTVADARFA 600

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KPLD ALI +LA++H VL+T+E+G+ GGFG++V+  LA+ GLLD T+++RP+ LPDR+ID
Sbjct: 601 KPLDTALIENLARNHAVLLTIEDGAEGGFGAYVMHHLARTGLLD-TIRFRPMTLPDRFID 659

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H +   Q  QAGL    IAA     LG
Sbjct: 660 HNTQDAQYHQAGLDAPAIAACAMQALG 686


>gi|381202917|ref|ZP_09910026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           XLDN2-5]
          Length = 640

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 312/551 (56%), Positives = 384/551 (69%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISA LG AV   ++ +    +AVIGDGA
Sbjct: 93  IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAALGFAVANKMQDKPGKGIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+RL S+R  
Sbjct: 153 MSAGMAYEAMNNAREAGNRLVVILNDN-DMSI--------APPVGGLSAYLARLVSSREF 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++AK + +++  P+H+ A K DE+ARGM   +G TLFEELG YY+GP+DGHN++ L
Sbjct: 204 LGLRDMAKKLARKLPRPLHKAAKKTDEFARGM--ATGGTLFEELGFYYVGPIDGHNLEHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GP LIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 262 IPVLENVRDA-AEGPCLIHVVTQKGKGYGPAEAAADKYHGVQKFDVITGTQAKAPPGPPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEAE D  V AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTNVFAQALIAEAERDPRVCAITAAMPSGTGLDKFELAFPDRIFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 381 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPN VVMA +DEAEL HMV T A  D  P   RYPRGNG GV +P     +P  LE+G
Sbjct: 441 ASLPNFVVMAAADEAELTHMVHTCAVHDSGPIAVRYPRGNGTGVAMPE----VPEALEIG 496

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++ EG +VA+L  GT ++  + A+  LE+ GL  +V D RF KPLD ALIR +  +H
Sbjct: 497 KGRVVREGRQVAILSLGTRLEEAMKAADTLEAKGLSASVVDLRFAKPLDEALIRRMLTTH 556

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EV +T+EEGSIGG G+HV+   +  GL D  +K R + LPD + D   P  Q A A L  
Sbjct: 557 EVAVTIEEGSIGGLGAHVLTLASDLGLTDNGLKIRTMRLPDIFQDQDKPEQQYADARLDA 616

Query: 539 SHIAATVFNIL 549
             I  TV   L
Sbjct: 617 DAIVTTVLTAL 627


>gi|259418101|ref|ZP_05742020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
           TrichCH4B]
 gi|259347007|gb|EEW58821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Silicibacter sp.
           TrichCH4B]
          Length = 642

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/557 (55%), Positives = 383/557 (68%), Gaps = 18/557 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+R  DGLSGFTKRSES +D FG  HSSTSISA LG +V RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESAFDPFGAAHSSTSISAALGFSVARDLGGVTEEGLGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGAMSAGMAFEAMNNAGHLGKRLIVILNDN-EMSIA--------PPVGALSSYLSRLYT 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P  +L+  AKG    +  P  E A +  +  +GM    G TLFE LG  YIGP+DGH+
Sbjct: 205 EAPFHDLKAAAKGAVSLLPEPFREGAKRAKDMLKGM--AMGGTLFESLGFSYIGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  +  GP+LIH VT+KG+GY  AE A DK H  AKFD  TG+Q K+ +
Sbjct: 263 MDQLLPVLRTVK-ARANGPILIHAVTKKGKGYRPAEVARDKGHATAKFDMVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F + L   A  D  + A+ AAM  GTGLNL   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPSYTSIFGKTLAELAAQDSKICAVTAAMPDGTGLNLMAERYPSRTFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + FMA LP MVVMA +DEAEL HMVATAAA DD P  FRYPRG G GVE+P   +   LE
Sbjct: 442 IGFMANLPGMVVMAAADEAELKHMVATAAAYDDGPIAFRYPRGEGEGVEMP--EQPEILE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ +G+RVALL +GT +     A+  L + G+  T+ADARF KPLD  +I +LA 
Sbjct: 500 IGKGRMIQDGKRVALLSFGTRLGEVRKAAEALAARGITPTIADARFAKPLDRDMILNLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LITVEEG++GGFGSHV Q L+ +G+ D  +K+R +VLPD +ID  SP D    A +
Sbjct: 560 EHEALITVEEGAVGGFGSHVAQLLSDEGVFDEGLKFRSMVLPDTFIDQASPKDMYDDAAM 619

Query: 537 TPSHIAATVFNILGQTR 553
              HI A V ++LG  R
Sbjct: 620 NAEHIEAKVLDVLGVAR 636


>gi|220926555|ref|YP_002501857.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium nodulans
           ORS 2060]
 gi|219951162|gb|ACL61554.1| deoxyxylulose-5-phosphate synthase [Methylobacterium nodulans ORS
           2060]
          Length = 665

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 321/568 (56%), Positives = 399/568 (70%), Gaps = 26/568 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----------KN 50
           + T+RQ  GLSGFTKR+ES YD FG  HSSTSISAGLGMA+ RDL             + 
Sbjct: 93  IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAIARDLAEAAARARGETPARR 152

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           NVVAVIGDG+++AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+ 
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLIVILNDN-DMSI--------APPVGAMSAY 203

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    R LR+ AK   + +   +++ AA+ +EYARG+++G G T+FEELG +Y+G
Sbjct: 204 LARLVSGDTYRSLRDTAKQFGRLLPKALYDTAARAEEYARGILAGGG-TMFEELGFHYVG 262

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           P+DGHN+D L+ +L+ V++    GPVL+HVVT+KG+GY  AE AAD+ H V KFD  +G+
Sbjct: 263 PIDGHNLDHLLPVLKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVLSGQ 321

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     SYT  F E+L+  A  D+ VVAI AAM  GTG+++F +  P R FDVGIAE
Sbjct: 322 QVKAKPNAPSYTRVFGESLVKAAAADETVVAITAAMPSGTGVDIFAKAHPERTFDVGIAE 381

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG T
Sbjct: 382 QHAVTFAAGLAAEGFRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFALDRAGLVGADGAT 441

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPN+ VMA +DEAEL HMVATA A D  P   RYPRG G+GV+LP   
Sbjct: 442 HAGAFDLAYLCCLPNLTVMAAADEAELVHMVATAHAHDAGPIALRYPRGEGVGVDLP--E 499

Query: 411 KGIPLEVGKGRILIE--GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           +G  L +GKGR+L    G RVALL  GT +   L A+  LE +G+ +TVADARF KPLD 
Sbjct: 500 RGEVLAIGKGRVLRRPPGARVALLSLGTRLAEALKAADRLEESGIGVTVADARFAKPLDE 559

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
           ALI  LA SHEVL+T+EEGS GGFG+ V+  LA  G LD GTV+ R L LPD Y DH SP
Sbjct: 560 ALILDLAGSHEVLVTLEEGSTGGFGAMVLHLLAARGALDAGTVRVRTLTLPDVYQDHDSP 619

Query: 528 ADQLAQAGLTPSHIAATVFNILGQTREA 555
               AQAGL    I  TV ++L +   A
Sbjct: 620 ERMYAQAGLDAPAIVRTVTDLLPEQPRA 647


>gi|296282072|ref|ZP_06860070.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium
           bathyomarinum JL354]
          Length = 643

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 308/557 (55%), Positives = 386/557 (69%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISAG+G A+   L+ +    +AVIGDGA
Sbjct: 97  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGIGFAMANKLQDKPGRAIAVIGDGA 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+R+ S+   
Sbjct: 157 MSAGMAYEAMNNAEQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLARVVSSGEY 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +A  V K++   +H    K +E+ RGM++G   TLFEELG YY+GP+DGHN+D L
Sbjct: 208 LGLRSLASKVAKKMHRRIHSSLGKAEEFTRGMVTGG--TLFEELGFYYVGPIDGHNLDHL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V+++   GPVLIHVVTEKG+GY +AE+A+DKYHGV+KFD  TG+Q KSS    +
Sbjct: 266 IPVLENVRDSDQ-GPVLIHVVTEKGKGYKFAEQASDKYHGVSKFDVITGEQKKSSGGPPN 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L   AE DK +VAI AAM  GTG++ F +  P R FDVGIAEQH VTFAAGL
Sbjct: 325 YQNVFGETLAKLAETDKRIVAITAAMPSGTGVDKFAKAHPERTFDVGIAEQHGVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 385 AAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HM  TAA  DD P  FRYPRG G GVE+P   K   LE+GKG
Sbjct: 445 ATLPNMVVMAAADEAELAHMTYTAAEYDDGPIAFRYPRGAGTGVEIP--EKLEKLEIGKG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  GT +   L A+  LE+ GL  TVAD RF KPLD  LI    + H+V
Sbjct: 503 RIVKEGSKVAILSLGTRLGEALDAAEQLEARGLSTTVADMRFAKPLDTVLIEKAMRDHDV 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++T+EE +IGG G+HV+ F +  GLLD  +K R + LPD + D   P  Q  +AGL  ++
Sbjct: 563 VVTIEEAAIGGLGAHVLTFASDSGLLDEGLKVRTMRLPDIFQDQDDPKKQYDEAGLNAAN 622

Query: 541 IAATVFNILGQTREALE 557
           I  TV   L      +E
Sbjct: 623 ILDTVLAALRHNSAGVE 639


>gi|56552130|ref|YP_162969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260752342|ref|YP_003225235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|81354958|sp|Q5NN52.1|DXS1_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|56543704|gb|AAV89858.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|258551705|gb|ACV74651.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 649

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/561 (54%), Positives = 386/561 (68%), Gaps = 14/561 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L    +  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G T FEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLATAARKADEYARGM--ATGGTFFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E LI EA+ D  +V I AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDE EL +MV + A  D  P   RYPRGNG+GV L  G K I L +GKG
Sbjct: 442 VNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSL-EGEKEI-LPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G++VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD AL R L KSH+V
Sbjct: 500 RLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEG++GGF + V+   + +GL+D  +K R L LPDR+        Q A+AGL    
Sbjct: 560 IITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSF 561
           I A V + L +  + +E++  
Sbjct: 620 IVAAVISALHRNSKPVEVVEM 640


>gi|254466411|ref|ZP_05079822.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           Y4I]
 gi|206687319|gb|EDZ47801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacterales bacterium
           Y4I]
          Length = 642

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 308/554 (55%), Positives = 386/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGVIPEGNGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   + VILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLGKRLFVILNDN-EMSI--------APPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+  AKG    +  P  E A +  +  +GM    G TLFE LG  Y+GP+DGH+
Sbjct: 205 GEPFQELKAAAKGAVSLLPEPFREGAKRAKDMLKGM--AVGGTLFEALGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+ +L  VK  + TGP+LIHV+T+KG+GY  AE+A DK H  AKFD  TG+Q K+ +
Sbjct: 263 LNQLLPVLRTVK-ARATGPILIHVLTKKGKGYGPAERARDKGHATAKFDMVTGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F   L+  A  D  + A+ AAM  GTGL+L   R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFGNELVKLAAKDDKICAVTAAMPDGTGLSLMAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + FMA LP MVVMA +DEAEL HMVATAAA +D P  FRYPRG G GVE+P   +   LE
Sbjct: 442 IAFMANLPGMVVMAAADEAELVHMVATAAAHNDGPIAFRYPRGEGEGVEMPETPE--VLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++  G+RVALL +GT +     A+  L + G++ T+ADARF KPLD  LI  LA 
Sbjct: 500 IGKGRMIQAGKRVALLSFGTRLGEVKKAAEALAAKGIKPTIADARFAKPLDRDLILQLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q LA++G+ D  +K+R +VLPD +ID  SPAD    A +
Sbjct: 560 DHEALITIEEGAVGGFGSHVAQLLAEEGVFDSGLKYRSMVLPDTFIDQASPADMYEVAAM 619

Query: 537 TPSHIAATVFNILG 550
               I A V ++LG
Sbjct: 620 NAPQIEAKVLDVLG 633


>gi|429209358|ref|ZP_19200596.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
 gi|428187823|gb|EKX56397.1| 1-deoxy-D-xylulose 5-phosphate synthase [Rhodobacter sp. AKP1]
          Length = 648

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/553 (54%), Positives = 379/553 (68%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG A+GR+L     + +AVIGDG+
Sbjct: 97  MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAALGFAMGRELGQPVGDTIAVIGDGS 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEA+N+AG+L+  + VILNDN  +S+         PPVGAL+  L  L S  P 
Sbjct: 157 ITAGMAYEALNHAGHLNKRLFVILNDN-DMSI--------APPVGALARYLVNLSSKAPF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR  A G+   + GP+ + A +  +   GM  G   TLFEELG  Y+GP+DGH+++ L
Sbjct: 208 ATLRAAADGLEASLPGPLRDGARRARQLVTGMPGGG--TLFEELGFTYVGPIDGHDMEAL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L   +  +TTGPVLIHVVT+KG+GY  AE A DKYHGV KFDP TG+Q KS A   +
Sbjct: 266 LQTLRAAR-ARTTGPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANAPN 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F   L  EA  D  +VAI AAM  GTG+++  +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 325 YTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYSSF+QR YDQ+ HDV LQ LPVRF +DRAGLVGADG TH G+FDV F+
Sbjct: 385 AGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFL 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNM VMA +DEAEL HM+ATA A D+ P  FR+PRG G+GVE+P   +G  LE G+G
Sbjct: 445 TSLPNMTVMAAADEAELIHMIATAVAFDEGPIAFRFPRGEGVGVEMP--ERGTVLEPGRG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +G  +   L A+ LLE+ G+ +TVADARF +PLD  LI  L + H  
Sbjct: 503 RVVREGTDVAILSFGAHLHEALQAAKLLEAEGVNVTVADARFSRPLDTGLIDQLVRHHAA 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE+G++GGFG+HV+ +LA  G  DG +  R + LPDR+I+  SP D  A AGL    
Sbjct: 563 LVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAED 622

Query: 541 IAATVFNILGQTR 553
           IAAT    L + R
Sbjct: 623 IAATARGALARGR 635


>gi|384411041|ref|YP_005620406.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|335931415|gb|AEH61955.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 649

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/561 (54%), Positives = 386/561 (68%), Gaps = 14/561 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L    +  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G T FEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLATAARKADEYARGM--ATGGTFFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E LI EA+ D  +V I AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDE EL +MV + A  D  P   RYPRGNG+GV L  G K I L +GKG
Sbjct: 442 VNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSL-EGEKEI-LPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G++VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD AL R L KSH+V
Sbjct: 500 RLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEG++GGF + V+   + +GL+D  +K R L LPDR+        Q A+AGL    
Sbjct: 560 IITIEEGALGGFATQVLTMASDEGLVDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSF 561
           I A V + L +  + +E++  
Sbjct: 620 IVAAVISALHRNSKPVEVVEM 640


>gi|384412441|ref|YP_005621806.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|118595489|sp|Q5NM38.2|DXS2_ZYMMO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|335932815|gb|AEH63355.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 650

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 307/563 (54%), Positives = 386/563 (68%), Gaps = 14/563 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L    +  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G T FEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLATAARKADEYARGM--ATGGTFFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E LI EA+ D  +V I AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDE EL +MV + A  D  P   RYPRGNG+GV L  G K I L +GKG
Sbjct: 442 VNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSL-EGEKEI-LPIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G++VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD AL R L KSH+V
Sbjct: 500 RLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEG++GGF + V+   + +GL+D  +K R L LPDR+        Q A+AGL    
Sbjct: 560 IITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSFKS 563
           I A V   L +  + +E++   +
Sbjct: 620 IVAAVTAALQRNSKPVEVVELTT 642


>gi|85703103|ref|ZP_01034207.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
 gi|85672031|gb|EAQ26888.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
          Length = 643

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/554 (55%), Positives = 385/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 95  IRTLRQKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGNCPSGLGDAIAVI 154

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG A+EAMNNAG+L   +IVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 155 GDGAMSAGMAFEAMNNAGHLKKRLIVILNDN-EMSIA--------PPVGALSSYLSRLYA 205

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++ +  AKG    +  P  E A +  +  +G+  G   TLFEELG  Y+GP+DGH+
Sbjct: 206 GEPFQDFKAAAKGAISLLPPPFQEGARRAKDMLKGLTVGG--TLFEELGFSYLGPIDGHD 263

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ +L  VK  +  GP+LIHV+T+KG+GY  AE+A D  H  AKFD  TG+Q KS +
Sbjct: 264 LHQLLPVLRTVK-ARANGPILIHVLTKKGKGYGPAERARDGGHATAKFDVLTGEQRKSPS 322

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ FA+AL+A A  D  + A+ AAM  GTGLNLF  R+P+R FDVGIAEQHAVTF
Sbjct: 323 NAPSYTSVFAKALLAHAGQDDKICAVTAAMPDGTGLNLFAERYPSRLFDVGIAEQHAVTF 382

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           +AGLA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G+FD
Sbjct: 383 SAGLAAGGMKPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAFD 442

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
             F+A LP  VVMA +DEAEL HMVATA A D+ P  FRYPRG G+GV +P   +G  LE
Sbjct: 443 TAFLANLPGFVVMAAADEAELVHMVATAVAHDEGPIAFRYPRGEGMGVTMP--ERGEALE 500

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+  G RVA+L +GT +   L AS  L + G+  T+ADARF KPLD  LI  L +
Sbjct: 501 IGKGRIIQTGARVAILSFGTRLAEVLKASESLRARGITPTIADARFAKPLDEKLILDLVQ 560

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LIT+EEG+IGGF SHV  FLA+  + D   K+R +VLPD +ID  +  D  A A L
Sbjct: 561 NHEALITIEEGAIGGFASHVSHFLAEAQVFDRGFKFRSMVLPDTFIDQANAEDMYAVARL 620

Query: 537 TPSHIAATVFNILG 550
             S I A V ++LG
Sbjct: 621 NASDIEARVLDVLG 634


>gi|254561124|ref|YP_003068219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
 gi|254268402|emb|CAX24359.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Methylobacterium extorquens DM4]
          Length = 660

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 323/559 (57%), Positives = 395/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 96  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 155

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 156 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 206

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 207 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 265

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 266 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 324

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 325 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 384

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG 
Sbjct: 385 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGA 444

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA SDEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 445 THAGAFDLAYLCCLPNMTVMAASDEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 502

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 503 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 562

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  LA+ G+LD G V+ R L LPD Y DH  
Sbjct: 563 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLAERGVLDTGRVRVRTLTLPDSYQDHDK 622

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 623 PEKMYAEAGLDAEGILKAV 641


>gi|126462659|ref|YP_001043773.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221639678|ref|YP_002525940.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           KD131]
 gi|126104323|gb|ABN77001.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221160459|gb|ACM01439.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Rhodobacter sphaeroides
           KD131]
          Length = 648

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/553 (54%), Positives = 379/553 (68%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG A+GR+L     + +AVIGDG+
Sbjct: 97  MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAALGFAMGRELGQPVGDTIAVIGDGS 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEA+N+AG+L+  + VILNDN  +S+         PPVGAL+  L  L S  P 
Sbjct: 157 ITAGMAYEALNHAGHLNKRLFVILNDN-DMSI--------APPVGALARYLVNLSSKAPF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR  A G+   + GP+ + A +  +   GM  G   TLFEELG  Y+GP+DGH+++ L
Sbjct: 208 ATLRAAADGLEASLPGPLRDGARRARQLVTGMPGGG--TLFEELGFTYVGPIDGHDMEAL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L   +  +TTGPVLIHVVT+KG+GY  AE A DKYHGV KFDP TG+Q KS A   +
Sbjct: 266 LQTLRAAR-ARTTGPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANAPN 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F   L  EA  D  +VAI AAM  GTG+++  +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 325 YTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYSSF+QR YDQ+ HDV LQ LPVRF +DRAGLVGADG TH G+FDV F+
Sbjct: 385 AGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFL 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNM VMA +DEAEL HM+ATA A D+ P  FR+PRG G+GVE+P   +G  LE G+G
Sbjct: 445 TSLPNMTVMAAADEAELIHMIATAVAFDEGPIAFRFPRGEGVGVEMP--ERGTVLEPGRG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +G  +   L A+ LLE+ G+ +TVADARF +PLD  LI  L + H  
Sbjct: 503 RVVREGTDVAILSFGAHLHEALQAAKLLEAEGVSVTVADARFSRPLDTGLIDQLVRHHAA 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE+G++GGFG+HV+ +LA  G  DG +  R + LPDR+I+  SP D  A AGL    
Sbjct: 563 LVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAED 622

Query: 541 IAATVFNILGQTR 553
           IAAT    L + R
Sbjct: 623 IAATARGALARGR 635


>gi|159045834|ref|YP_001534628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
 gi|157913594|gb|ABV95027.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dinoroseobacter shibae DFL
           12]
          Length = 643

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/554 (54%), Positives = 382/554 (68%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN----NVVAVI 56
           + T+R  DGLSGFTKRSES YD FG  HSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRMKDGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGGAPEHGIGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGA++AG A+EA+NNAG+L   +IVILNDN ++S+         PP GA+SS L+RL +
Sbjct: 154 GDGAISAGMAFEALNNAGHLKKRLIVILNDN-EMSIA--------PPTGAMSSYLNRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +E +  AKG    +  P  E A +  +  + M  G   TLFEELG  Y+GP+DGH+
Sbjct: 205 GAPFQEFKAAAKGAVSLLPPPFQEGAKRAKDILKHMTIGG--TLFEELGFSYVGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           ++ L+++L  VK  +  GP+LIH +T+KG+GY  AE AADK H  AKFD  +G Q K+ +
Sbjct: 263 MEQLLSVLRTVK-ARADGPILIHAITKKGKGYAPAEGAADKGHATAKFDVVSGAQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              +YT  FAE LI EAE D  +VA+ AAM  GTGL+ F +RF  R FDV IAEQH VTF
Sbjct: 322 NAPTYTNVFAETLIDEAERDSRIVAVTAAMPSGTGLDKFAKRFAARTFDVAIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
            AGLA  G+KPFC +YS+F+QR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH G++D
Sbjct: 382 CAGLAAGGMKPFCTMYSTFLQRGYDQVVHDVALQNLPVRFAIDRAGLVGADGATHAGAYD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
             +++ LPNMVVMA +DEAEL HMVATA A D  P  FR+PRG G+GVELP   +G+PLE
Sbjct: 442 TAYLSNLPNMVVMAAADEAELRHMVATAVAHDSGPIAFRFPRGEGVGVELP--ERGVPLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGRI+ EG RVA+L +GT +     A   L + G+  TVADARF KPLD  LI  LA 
Sbjct: 500 IGKGRIIAEGSRVAILSFGTRLAEVREACEALTARGITPTVADARFAKPLDRDLILRLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEG++GGFGSHV Q L+++G+ D  +K+R +VLPD +ID  SP D    AGL
Sbjct: 560 EHEALITIEEGAVGGFGSHVAQLLSEEGVFDTGLKFRSMVLPDTFIDQASPRDMYDIAGL 619

Query: 537 TPSHIAATVFNILG 550
               I A V ++LG
Sbjct: 620 NAPDIEAKVLSVLG 633


>gi|427411739|ref|ZP_18901941.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           ATCC 51230]
 gi|425710029|gb|EKU73052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingobium yanoikuyae
           ATCC 51230]
          Length = 639

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 311/557 (55%), Positives = 385/557 (69%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISA LG AV   ++ +    +AVIGDGA
Sbjct: 93  IRTLRQGGGLSGFTKRAESEYDPFGAAHSSTSISAALGFAVANKMQDKPGKGIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+RL S+R  
Sbjct: 153 MSAGMAYEAMNNAREAGNRLVVILNDN-DMSI--------APPVGGLSAYLARLVSSREF 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++AK + +++  P+H+ A K DE+ARGM   +G TLFEELG YY+GP+DGHN++ L
Sbjct: 204 LGLRDMAKKLARKLPRPLHKAAKKTDEFARGM--ATGGTLFEELGFYYVGPIDGHNLEHL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++    GP LIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     S
Sbjct: 262 IPVLENVRDA-AEGPCLIHVVTQKGKGYGPAEAAADKYHGVQKFDVITGTQAKAPPGPPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEA+ D  V AI AAM  GTGL+ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 321 YTNVFAQALIAEAQRDPRVCAITAAMPSGTGLDKFELAFPDRTFDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 381 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HMV T A  D  P   RYPRGNG GV +P   +   LE+GKG
Sbjct: 441 ASLPNFVVMAAADEAELTHMVHTCAVHDSGPIAVRYPRGNGTGVAMPEVAEA--LEIGKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VA+L  GT ++  + A+  LE+ GL  +V D RF KPLD ALIR +  +HEV
Sbjct: 499 RVVREGRQVAILSLGTRLEEAMKAADTLEAKGLSASVVDLRFAKPLDEALIRRMLTTHEV 558

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EEGSIGG G+HV+   +  GL D  +K R + LPD + D   P  Q A A L    
Sbjct: 559 AVTIEEGSIGGLGAHVLTLASDLGLTDHGLKIRTMRLPDIFQDQDKPEQQYADARLDADA 618

Query: 541 IAATVFNILGQTREALE 557
           I  TV   L      +E
Sbjct: 619 IVDTVLTALRHNSAGVE 635


>gi|56552494|ref|YP_163333.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|56544068|gb|AAV90222.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 660

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 307/563 (54%), Positives = 386/563 (68%), Gaps = 14/563 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L    +  VA+IGDG+
Sbjct: 104 IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGS 163

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 164 MTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 214

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G T FEELG YY+GPVDGHN+D L
Sbjct: 215 MNLRDIMRGVVNRMPKGLATAARKADEYARGM--ATGGTFFEELGFYYVGPVDGHNLDQL 272

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 273 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS 331

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E LI EA+ D  +V I AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 332 YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 391

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 392 AAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFM 451

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDE EL +MV + A  D  P   RYPRGNG+GV L  G K I L +GKG
Sbjct: 452 VNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSL-EGEKEI-LPIGKG 509

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G++VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD AL R L KSH+V
Sbjct: 510 RLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQV 569

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEG++GGF + V+   + +GL+D  +K R L LPDR+        Q A+AGL    
Sbjct: 570 IITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADG 629

Query: 541 IAATVFNILGQTREALEIMSFKS 563
           I A V   L +  + +E++   +
Sbjct: 630 IVAAVTAALQRNSKPVEVVELTT 652


>gi|349688169|ref|ZP_08899311.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           oboediens 174Bp2]
          Length = 634

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/543 (55%), Positives = 390/543 (71%), Gaps = 31/543 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 106 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 165

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 166 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 216

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 217 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 274

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 275 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGEQ 334

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F R +P R FDVGIAEQ
Sbjct: 335 KKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAEQ 394

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 395 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 454

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 455 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGGGLGLELPAA-- 512

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  +   L A+ +L + GL  TVADARF 
Sbjct: 513 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLADALKAADMLAAQGLSPTVADARFA 572

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 573 KPIDTALVEQLARNHAVLITIEEGSVGGFGSYVMTHLAKTGLLD-RVRFRPMTLPDRFID 631

Query: 524 HGS 526
           H +
Sbjct: 632 HNT 634


>gi|77463823|ref|YP_353327.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
 gi|119368195|sp|Q3J1A8.1|DXS1_RHOS4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|77388241|gb|ABA79426.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           2.4.1]
          Length = 648

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/553 (54%), Positives = 379/553 (68%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG A+GR+L     + +AVIGDG+
Sbjct: 97  MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAALGFAMGRELGQPVGDTIAVIGDGS 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEA+N+AG+L+  + VILNDN  +S+         PPVGAL+  L  L S  P 
Sbjct: 157 ITAGMAYEALNHAGHLNKRLFVILNDN-DMSI--------APPVGALARYLVNLSSKAPF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR  A G+   + GP+ + A +  +   GM  G   TLFEELG  Y+GP+DGH+++ L
Sbjct: 208 ATLRAAADGLEASLPGPLRDGARRARQLVTGMPGGG--TLFEELGFTYVGPIDGHDMEAL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L   +  +TTGPVLIHVVT+KG+GY  AE A DKYHGV KFDP TG+Q KS A   +
Sbjct: 266 LQTLRAAR-ARTTGPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANAPN 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F   L  EA  D  +VAI AAM  GTG+++  +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 325 YTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYSSF+QR YDQ+ HDV LQ LPVRF +DRAGLVGADG TH G+FDV F+
Sbjct: 385 AGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFI 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNM VMA +DEAEL HM+ATA A D+ P  FR+PRG G+GVE+P   +G  LE G+G
Sbjct: 445 TSLPNMTVMAAADEAELIHMIATAVAFDEGPIAFRFPRGEGVGVEMP--ERGTVLEPGRG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +G  +   L A+ LLE+ G+ +TVADARF +PLD  LI  L + H  
Sbjct: 503 RVVREGTDVAILSFGAHLHEALQAAKLLEAEGVSVTVADARFSRPLDTGLIDQLVRHHAA 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE+G++GGFG+HV+ +LA  G  DG +  R + LPDR+I+  SP D  A AGL    
Sbjct: 563 LVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAED 622

Query: 541 IAATVFNILGQTR 553
           IAAT    L + R
Sbjct: 623 IAATARGALARGR 635


>gi|349686274|ref|ZP_08897416.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           oboediens 174Bp2]
          Length = 631

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/543 (55%), Positives = 390/543 (71%), Gaps = 31/543 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 162

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 163 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 213

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YY+GP
Sbjct: 214 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYVGP 271

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 272 VDGHDMNQLVHILRNLRDAEDVGPVLLHVITEKGHGYKPAESAGDKYHAVSKFNVVTGEQ 331

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F R +P R FDVGIAEQ
Sbjct: 332 KKGPSGPPSYTSVFAKELVRQASTDDRIVTITAAMPSGTGLDKFARAYPDRFFDVGIAEQ 391

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 392 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 451

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 452 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGGGLGLELPAA-- 509

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  +   L A+ +L + GL  TVADARF 
Sbjct: 510 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLADALKAADMLAAQGLSPTVADARFA 569

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KP+D AL+  LA++H VLIT+EEGS+GGFGS+V+  LA+ GLLD  V++RP+ LPDR+ID
Sbjct: 570 KPIDTALVEQLARNHAVLITIEEGSVGGFGSYVMTHLAKTGLLD-RVRFRPMTLPDRFID 628

Query: 524 HGS 526
           H +
Sbjct: 629 HNT 631


>gi|294084634|ref|YP_003551392.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664207|gb|ADE39308.1| deoxyxylulose-5-phosphate synthase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 640

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 295/536 (55%), Positives = 386/536 (72%), Gaps = 13/536 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKR ESE+D FG GHSSTSISAGLGMAV  DL+    NV+AVIGDGA
Sbjct: 94  IETLRQRDGLSGFTKRDESEFDPFGAGHSSTSISAGLGMAVASDLQSTPRNVIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG  +S +IVILNDN  +S+          PVGA+SS LSRL ++ P 
Sbjct: 154 MSAGMAYEAMNNAGASESRLIVILNDN-DMSISQ--------PVGAMSSYLSRLITSEPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R++ + VT +    +   A +  + AR +I  +  ++F +LG  +IGP+DGH+V+ L
Sbjct: 205 HSIRDLVREVTSKFPAEIERTARRAKDVARDLIGVN--SVFSQLGFMHIGPLDGHDVNQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + IL+ +++T T GPVL+HVVTEKG G+P+ +++ +KYH V KFD  TG Q KS+    +
Sbjct: 263 LPILKNLRDTHTNGPVLLHVVTEKGHGHPFKDQSHEKYHAVPKFDIITGTQQKSAGNVPN 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ FA +LI  AE D  +VAI AAM  GTGL+    +FP+R FDVGIAEQHAVTFAAG+
Sbjct: 323 YTSVFANSLIKAAEADSKIVAITAAMPSGTGLDKLKAKFPSRVFDVGIAEQHAVTFAAGM 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCA+YS+F+QR YDQ++HDV LQ LPVRFA+DRAG+VGADG TH G +DV ++
Sbjct: 383 ASEGMKPFCALYSTFLQRGYDQLIHDVCLQNLPVRFAIDRAGVVGADGATHAGIYDVAYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           +CLPNMV+M PSDEAEL HMVAT+ A DD PS  RYPRG G+G ELP   + +P  +GKG
Sbjct: 443 SCLPNMVIMCPSDEAELIHMVATSVAYDDGPSALRYPRGEGVGCELPDEAEILP--IGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+ +A+L  GT +  CLAA+  +   G+ + VADARF KPLD  L+  LA ++  
Sbjct: 501 RMIREGDDIAILSLGTRLTDCLAAADAMAVQGVNVAVADARFAKPLDTDLLAHLATNYRK 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           L+ VEE S GGF +HV+ +LA  GLLD  ++ R + LPD YI+H S A QLA AG+
Sbjct: 561 LVIVEENSPGGFSAHVMTYLANHGLLDTGLQVRLMTLPDIYIEHDSQAGQLALAGI 616


>gi|341613385|ref|ZP_08700254.1| 1-deoxy-D-xylulose-5-phosphate synthase [Citromicrobium sp.
           JLT1363]
          Length = 632

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 307/557 (55%), Positives = 384/557 (68%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISAG+G A+   L+ +    +AVIGDGA
Sbjct: 86  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGIGFAMANRLQDKPGRAIAVIGDGA 145

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+R+ S+   
Sbjct: 146 MSAGMAYEAMNNAEQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLARVVSSGEY 196

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +A  V K++   +H    K +E+ RGM++G   TLFEELG YY+GP+DGHN+D L
Sbjct: 197 LGLRSLASKVAKKMHRRIHSSLGKAEEFTRGMVTGG--TLFEELGFYYVGPIDGHNLDHL 254

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V+++   GPVLIHVVTEKG+GY +AE++ADKYHGV+KFD  TG+Q KS     +
Sbjct: 255 IPVLENVRDSDQ-GPVLIHVVTEKGKGYKFAEESADKYHGVSKFDVITGEQKKSKGGPPN 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L   AE D  + AI AAM GGTG++ F +  P R FDVGIAEQH VTFAAGL
Sbjct: 314 YQNVFGETLAKLAETDTRICAITAAMPGGTGVDKFAKAHPERSFDVGIAEQHGVTFAAGL 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 374 AAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDITYL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA SDEAEL HM  TAA  D+ P  FRYPRG G GVE+P   K   LE+GKG
Sbjct: 434 ATLPNFVVMAASDEAELAHMTYTAAEYDEGPIAFRYPRGAGTGVEIP--EKLQKLEIGKG 491

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  GT +   L A+  LE+ GL  TVAD RF KPLD ALI    + HEV
Sbjct: 492 RIVKEGSKVAILSLGTRLGEALEAAEQLEARGLSTTVADMRFAKPLDTALIEKAMREHEV 551

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++T+EEG+IGG G+HV+ + +  GLLD  +K R + LPD + D   P  Q  +AGL   H
Sbjct: 552 VLTIEEGAIGGIGAHVLTYASDSGLLDEGLKVRTMRLPDIFQDQDDPKKQYDEAGLNAPH 611

Query: 541 IAATVFNILGQTREALE 557
           I  TV   L      +E
Sbjct: 612 ILDTVLAALRHNSAGVE 628


>gi|260753843|ref|YP_003226736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553206|gb|ACV76152.1| deoxyxylulose-5-phosphate synthase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 650

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/563 (54%), Positives = 386/563 (68%), Gaps = 14/563 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFT+R+ESEYD FG  HSSTSISA LG A+   L    +  VA+IGDG+
Sbjct: 94  IRTLRQRDGLSGFTQRAESEYDAFGAAHSSTSISAALGFAMASKLSDSDDKAVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMNNA      +IVILNDN ++S+         PPVGALSS LSRL S+RP 
Sbjct: 154 MTAGMAYEAMNNAKAAGKRLIVILNDN-EMSIS--------PPVGALSSYLSRLISSRPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++ +GV  ++   +   A K DEYARGM   +G T FEELG YY+GPVDGHN+D L
Sbjct: 205 MNLRDIMRGVVNRMPKGLATAARKADEYARGM--ATGGTFFEELGFYYVGPVDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GP+L+HVVT KG+GY  AE A DKYH V + D  +GKQ K+     S
Sbjct: 263 IPVLENVRDAKD-GPILVHVVTRKGQGYAPAEAAKDKYHAVQRLDVVSGKQAKAPPGPPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E LI EA+ D  +V I AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YTSVFSEQLIKEAKQDDKIVTITAAMPTGTGLDRFQQYFPERMFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KPFC +YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ FM
Sbjct: 382 AAAGYKPFCCLYSTFLQRGYDQLVHDVAIQNLPVRFAVDRAGLVGADGATHAGSFDLAFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMAPSDE EL +MV + A  D  P   RYPRGNG+GV L  G K I L +GKG
Sbjct: 442 VNLPNMVVMAPSDERELANMVHSMAHYDQGPISVRYPRGNGVGVSL-EGEKEI-LTIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++  G++VA+L  GT ++  L A+  L++ GL  +VAD RF KPLD AL R L KSH+V
Sbjct: 500 RLIRRGKKVAILSLGTRLEESLKAADRLDAQGLSTSVADMRFAKPLDEALTRQLLKSHQV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +IT+EEG++GGF + V+   + +GL+D  +K R L LPDR+        Q A+AGL    
Sbjct: 560 IITIEEGALGGFATQVLTMASDEGLMDDGLKIRTLRLPDRFQPQDKQERQYAEAGLDADG 619

Query: 541 IAATVFNILGQTREALEIMSFKS 563
           + A V   L +  + +E++   +
Sbjct: 620 MVAAVTAALQRNSKPVEVVELTT 642


>gi|332558698|ref|ZP_08413020.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
 gi|332276410|gb|EGJ21725.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           WS8N]
          Length = 648

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/553 (54%), Positives = 379/553 (68%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG A+GR+L     + +AVIGDG+
Sbjct: 97  MRTLRQKGGLSGFTKRSESAYDPFGAAHSSTSISAALGFAMGRELGQPVGDTIAVIGDGS 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEA+N+AG+L+  + VILNDN  +S+         PPVGAL+  L  L S  P 
Sbjct: 157 ITAGMAYEALNHAGHLNKRLFVILNDN-DMSI--------APPVGALARYLVNLSSKAPF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR  A G+   + GP+ + A +  +   GM  G   TLFEELG  Y+GP+DGH+++ L
Sbjct: 208 ATLRAAADGLEASLPGPLRDGARRARQLVTGMPGGG--TLFEELGFTYVGPIDGHDMEAL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L   +  +TTGPVLIHVVT+KG+GY  AE A DKYHGV KFDP TG+Q KS A   +
Sbjct: 266 LQTLRAAR-ARTTGPVLIHVVTKKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANAPN 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F   L  EA  D  +VAI AAM  GTG+++  +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 325 YTKVFGSTLTEEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYSSF+QR YDQ+ HDV LQ LPVRF +DRAGLVGADG TH G+FDV F+
Sbjct: 385 AGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFL 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNM VMA +DEAEL HM+ATA A D+ P  FR+PRG G+GVE+P   +G  LE G+G
Sbjct: 445 TSLPNMTVMAAADEAELIHMIATAVAFDEGPIAFRFPRGEGVGVEMP--ERGTVLEPGRG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +G  +   L A+ LLE+ G+ +TVADARF +PLD  LI  L + H  
Sbjct: 503 RVVREGTDVAILSFGAHLHEALQAAKLLEAEGVSVTVADARFSRPLDTGLIDQLVRHHAA 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE+G++GGFG+HV+ +LA  G  DG +  R + LPDR+I+  SP D  A AGL    
Sbjct: 563 LVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAED 622

Query: 541 IAATVFNILGQTR 553
           IAAT    L + R
Sbjct: 623 IAATARGALVRGR 635


>gi|170744395|ref|YP_001773050.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
 gi|168198669|gb|ACA20616.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
          Length = 654

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 319/562 (56%), Positives = 393/562 (69%), Gaps = 26/562 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG----------RKN 50
           + T+RQ  GLSGFTKR+ES YD FG  HSSTSISAGLGMAV RDL             + 
Sbjct: 93  IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAVARDLAEAAARARGETPERR 152

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           NVVAVIGDG+++AG AYEAMNNAG L S ++VILNDN              PPVGA+S+ 
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLVVILNDNDM---------SIAPPVGAMSAY 203

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    R LR+ A+   + +   +++ A + +EYARG+++G G T+FEELG +Y+G
Sbjct: 204 LARLVSGDTYRSLRDTARQFGRLLPKALYDTAVRAEEYARGILAGGG-TMFEELGFHYVG 262

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           P+DGHN+D L+ IL+ V++    GPVL+HVVT+KG+GY  AE AAD+ H V KFD  +G+
Sbjct: 263 PIDGHNLDHLLPILKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVVSGQ 321

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+ A   +YT  F E+L+  A+ D  VVAI AAM  GTG++LF +  P R FDVGIAE
Sbjct: 322 QVKAKANAPTYTRVFGESLVKAADADDKVVAITAAMPSGTGVDLFAKAHPGRTFDVGIAE 381

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG T
Sbjct: 382 QHAVTFAAGLAAEGYRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFALDRAGLVGADGAT 441

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPNMVVMA +DEAEL HMVATA A D  P  FRYPRG G+GV+LP   
Sbjct: 442 HAGAFDLAYLCCLPNMVVMAAADEAELVHMVATAHAHDAGPIAFRYPRGEGVGVDLP--E 499

Query: 411 KGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           KG  L +G+GR++   EG RVAL+  GT +   L A+  LE  G+ +TVADARF KPLD 
Sbjct: 500 KGEVLALGRGRVIRRPEGARVALVSLGTRLAEALKAAEQLEERGIGVTVADARFAKPLDE 559

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
            L+  LA SHEVL+TVEEGS GGFG+ V+  LA  G LD GTV+ R L LPD Y DH +P
Sbjct: 560 GLLLDLAGSHEVLVTVEEGSTGGFGAMVLHLLAGRGALDAGTVRVRTLTLPDSYQDHDTP 619

Query: 528 ADQLAQAGLTPSHIAATVFNIL 549
               AQAGL    I   V + L
Sbjct: 620 ERMYAQAGLDAPAIVRAVEHAL 641


>gi|188581083|ref|YP_001924528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
           BJ001]
 gi|179344581|gb|ACB79993.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
          Length = 660

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 320/559 (57%), Positives = 395/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLK-----------GRK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL            G++
Sbjct: 96  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLDDAEAKAKGEAPGKR 155

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 156 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 206

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 207 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 265

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 266 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 324

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 325 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 384

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG 
Sbjct: 385 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGA 444

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVELP  
Sbjct: 445 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDSGPIALRYPRGEGVGVELP-- 502

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+ ++VADARF KPLD
Sbjct: 503 ESGEPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAVSVADARFAKPLD 562

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             +I  LA SHEVL+TVEEGS+GGFG+ V+  L++ G+LD G V+ R L LPD Y DH  
Sbjct: 563 AEMIVDLANSHEVLVTVEEGSVGGFGAMVLHLLSERGVLDAGRVRVRTLTLPDVYQDHDK 622

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 623 PEKMYAEAGLDAEGILKAV 641


>gi|126734148|ref|ZP_01749895.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
           CCS2]
 gi|126717014|gb|EBA13878.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter sp.
           CCS2]
          Length = 640

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 308/558 (55%), Positives = 384/558 (68%), Gaps = 13/558 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISA LG  VGRD+     + +AVIGDG+
Sbjct: 94  IRTLRQEGGLSGFTKRAESEYDPFGAAHSSTSISAALGFTVGRDMGMPTGDAIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG     + VILNDN ++S+         PPVGA+S  LS L ++ P+
Sbjct: 154 ISAGMAYEALNNAGAEGRRLFVILNDN-EMSIA--------PPVGAMSKYLSGLYAS-PM 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            EL ++A+G    + GP+ + A +      GM +G   TLFEELG  Y+GP+DGH++  L
Sbjct: 204 GELHKMAEGFEAALPGPLRDHARRARSLVTGMQTGGSGTLFEELGFSYVGPIDGHDMTQL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L   + T+ TGPVLIHV T KG+GY  AE +AD  HGV+KFD ATG Q KS     S
Sbjct: 264 LPVLRAAR-TRATGPVLIHVCTTKGKGYAPAEDSADCGHGVSKFDLATGAQAKSKPNAPS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F  AL  EA+ D  +VA+ AAM  GTG+++   RF  R FDVGIAEQH VTFAAG+
Sbjct: 323 YTKVFGSALTTEAQADPSIVAVTAAMPSGTGVDIMGARFKDRVFDVGIAEQHGVTFAAGM 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYS+F+QR YDQVVHDV LQ LPVRFA+DRAGLVGADGPTH G+FD+ +M
Sbjct: 383 AASGLKPFCAIYSTFLQRGYDQVVHDVALQNLPVRFAIDRAGLVGADGPTHAGAFDIGYM 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPNMVVMA  DE EL HMV TAAA DD P  FRYPRG G G++LP   +G  +E+GKG
Sbjct: 443 SALPNMVVMAAGDELELMHMVRTAAAYDDGPIAFRYPRGEGEGIDLP--ERGELIEIGKG 500

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L +G  +  C  A+  L + G+  T+ADARF KPLD ALIR L ++H+ 
Sbjct: 501 RIVQEGSDVAILSFGAHLAECRKAAEKLAAQGVSTTIADARFAKPLDRALIRQLLRNHKA 560

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVE+GS GGFG+ V+  LA DGLLDG  + R + LPDRYIDH SP    A AGLT   
Sbjct: 561 LITVEQGSRGGFGAMVLHDLANDGLLDGCCQVRTMTLPDRYIDHASPDAMYADAGLTAVD 620

Query: 541 IAATVFNILGQTREALEI 558
           +AAT     G   + +E+
Sbjct: 621 VAATAMQAAGIEVKRVEV 638


>gi|146278064|ref|YP_001168223.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145556305|gb|ABP70918.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 648

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/553 (54%), Positives = 379/553 (68%), Gaps = 14/553 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSES+YD FG  HSSTSISA LG A+GR+L     + +AVIGDG+
Sbjct: 97  MRTLRQKGGLSGFTKRSESDYDPFGAAHSSTSISAALGFAMGRELGQPVGDTIAVIGDGS 156

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEA+N+AG+L+  + VILNDN  +S+         PPVGAL+  L  L S  P 
Sbjct: 157 ITAGMAYEALNHAGHLNKRLFVILNDN-DMSI--------APPVGALARYLVNLSSKAPF 207

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR  A G+   + GP+ + A +  +   GM  G   TLFEELG  Y+GP+DGH++  L
Sbjct: 208 ATLRAAADGIESALPGPLRDGARRARQLVTGMPGGG--TLFEELGFTYVGPIDGHDMPSL 265

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L   +  +TTGPVLIHVVT KG+GY  AE A DKYHGV KFDP TG+Q KS A   +
Sbjct: 266 LQTLRAAR-ARTTGPVLIHVVTRKGKGYAPAENAPDKYHGVNKFDPVTGEQKKSVANAPN 324

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F   L  EA  D  +VAI AAM  GTG+++  +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 325 YTKVFGTTLTDEAARDPRIVAITAAMPSGTGVDIMQKRFPNRVFDVGIAEQHAVTFAAGL 384

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYSSF+QR YDQ+ HDV LQ LPVRF +DRAGLVGADG TH G+FDV F+
Sbjct: 385 AGAGMKPFCAIYSSFLQRGYDQIAHDVALQNLPVRFVIDRAGLVGADGATHAGAFDVGFL 444

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPN+ VMA +DEAEL HM+ATA A D+ P  FR+PRG G+GVE+P   +G  LE G+G
Sbjct: 445 TTLPNLTVMAAADEAELVHMIATAVAFDEGPIAFRFPRGEGVGVEMP--ERGTVLEPGRG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +G  +   L A+ LLE+ G+ +TVADARF +PLD  LI  L + H  
Sbjct: 503 RVVREGTDVAILSFGAHLHEALQAAKLLEAEGVSVTVADARFSRPLDTGLIDQLVRHHPA 562

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+TVE+G++GGFG+HV+ +LA  G  DG +  R + LPDR+I+  SP D  A AGL    
Sbjct: 563 LVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAED 622

Query: 541 IAATVFNILGQTR 553
           IAAT  + L + R
Sbjct: 623 IAATARSALARGR 635


>gi|149185145|ref|ZP_01863462.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
 gi|148831256|gb|EDL49690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. SD-21]
          Length = 640

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 305/557 (54%), Positives = 385/557 (69%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG A+   ++GR    +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAMANKMQGRPGRGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+R  S+   
Sbjct: 154 MSAGMAYEAMNNAEQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLARTVSSSEY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +A  ++K++   +H    K +EYARGM++G   TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGLRSLASRLSKKLSRRVHSSLEKAEEYARGMVTGG--TLFEELGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++++  GPVLIHVVT+KG+GY  AE +ADKYHGVAKFD  TG+Q KSS    +
Sbjct: 263 IPVLENVRDSEQ-GPVLIHVVTQKGKGYAPAENSADKYHGVAKFDVVTGEQKKSSGGPPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L   A  D  + AI AAM  GTG++ F +  P + FDVGIAEQH VTFAAGL
Sbjct: 322 YQNVFGETLAKLANDDPRICAITAAMPSGTGVDKFAQAHPDKAFDVGIAEQHGVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG++PF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 382 AAEGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGCTHAGSFDITYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HM  TAA  DD P  FRYPRG G GVE+P   K    E+GKG
Sbjct: 442 ATLPNFVVMAAADEAELAHMTYTAAEYDDGPIAFRYPRGAGTGVEIP--EKLEKFEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  G  ++    A+  LE+ GL  TVAD RF KPLD ALI  + +SHEV
Sbjct: 500 RIMREGSKVAILSLGARLEEAKKAADQLEAKGLSTTVADMRFAKPLDTALIEQIMRSHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++T+EEG++GG G+HV+ + + +GL DG +K R + LPD + D   P  Q  +AGL   H
Sbjct: 560 VVTIEEGAVGGLGAHVLTYASDEGLTDGGLKVRTMRLPDAFQDQDDPTKQYDEAGLNAPH 619

Query: 541 IAATVFNILGQTREALE 557
           I  TV + L      +E
Sbjct: 620 IVDTVLSALRHNSAGVE 636


>gi|315498416|ref|YP_004087220.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
           48]
 gi|315416428|gb|ADU13069.1| deoxyxylulose-5-phosphate synthase [Asticcacaulis excentricus CB
           48]
          Length = 640

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/552 (54%), Positives = 385/552 (69%), Gaps = 18/552 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + ++RQ  GLSGFTKRSES YD FG  H++TSISA LG    RD KG  N VVAVIGDG+
Sbjct: 93  IRSLRQGGGLSGFTKRSESPYDPFGAAHAATSISAALGFCAARDHKGETNKVVAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA     ++ VILNDN  +S+         PPVG +S+ L+ L S    
Sbjct: 153 MSAGMAYEAMNNAAETTRNLTVILNDN-DMSIA--------PPVGGMSAYLANLVSGGAY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + +R   K V +++   + E+  K +E++R  ++G   T FEELG YY+GP+DGH++D+L
Sbjct: 204 QAVRRFGKSVAERLPRALFEMVRKGEEFSRTYVTGG--TFFEELGFYYVGPIDGHDMDNL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++ + V++  T  PVL+HVVT+KG+GY  AE A+DKYHGVAKFD  TG+Q K  A   S
Sbjct: 262 LSVFKRVRDI-TDRPVLVHVVTQKGKGYAPAEAASDKYHGVAKFDVITGEQAKPKANAPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA  LI +A++D  VVAI AAM  GTGL+ F   FPTRC+DVGIAEQHAVTFAAGL
Sbjct: 321 YTEVFAAELIKQAQIDPKVVAITAAMPSGTGLDRFAEVFPTRCYDVGIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPFCA+YS+F+QR YDQV HDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 381 AADGMKPFCALYSTFLQRGYDQVAHDVALQDLPVRFAIDRAGLVGADGATHAGTFDIGYL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
             LP M++MA +DEAEL  M+ATA A DD PS FRYPRG G+GVE+P     +P  L +G
Sbjct: 441 GTLPGMMIMAAADEAELARMIATATAYDDGPSAFRYPRGEGVGVEIP----AVPETLAIG 496

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           +GRI+ EG +VA+L  G  +   L A+ LL + GL  TVADARF KPLD  LI  LA+ H
Sbjct: 497 RGRIVREGSKVAILSLGARLPEALKAADLLGARGLSTTVADARFAKPLDKELILQLARHH 556

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           E LITVEEG++GGFG+ V+ +LA +G LD  +K R L LPDR+ DH  P    A AGL  
Sbjct: 557 ECLITVEEGAMGGFGAFVLHYLAGEGALDNGLKIRTLTLPDRFQDHDKPEKMYADAGLDA 616

Query: 539 SHIAATVFNILG 550
             IAA+    LG
Sbjct: 617 QGIAASAMKALG 628


>gi|16126307|ref|NP_420871.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
           CB15]
 gi|221235086|ref|YP_002517522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Caulobacter crescentus
           NA1000]
 gi|21263543|sp|Q9A6M5.1|DXS_CAUCR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782066|sp|B8GXC4.1|DXS_CAUCN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|13423547|gb|AAK24039.1| 1-deoxyxylulose-5-phosphate synthase [Caulobacter crescentus CB15]
 gi|220964258|gb|ACL95614.1| 1-deoxy-D-xylulose 5-phosphate synthase [Caulobacter crescentus
           NA1000]
          Length = 640

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 314/552 (56%), Positives = 386/552 (69%), Gaps = 18/552 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  H++TSISA LG    RD KG  N+V+AVIGDG+
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAALGFCAARDAKGEDNSVIAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           + AG AYEAMN A      +IVILNDN  +S+         PPVG +S+ L+ L S    
Sbjct: 152 LGAGMAYEAMNAATDTTKRLIVILNDN-DMSIA--------PPVGGMSAYLANLVSGGAY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +R++ K V +++  PM E A K +EYARGM++G   T FEELG YYIGP+DGH++D L
Sbjct: 203 RSVRKLGKTVVEKLPTPMREAARKAEEYARGMVTGG--TFFEELGFYYIGPIDGHDMDAL 260

Query: 181 VAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           V++L   KN K  G  PVL+H VT+KG+GY  AE AADK H V KFD  TG+Q K++   
Sbjct: 261 VSVL---KNAKAFGDKPVLVHCVTQKGKGYAPAEGAADKLHAVVKFDVVTGQQQKAAGGP 317

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  FA+ LI +AE D  +VAI AAM  GTGL+LF + FP R FDVGIAEQHAVTFAA
Sbjct: 318 PSYTKVFAQELIKQAEKDDKIVAITAAMPSGTGLDLFGKAFPERTFDVGIAEQHAVTFAA 377

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A +G+KPF AIYS+F+QR YDQVVHDV +Q LPVRFAMDRAGLVGADGPTH GSFD+ 
Sbjct: 378 GMAADGMKPFAAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIG 437

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM  LP MV+MA +DE EL  MVATAA IDDRPS FRYPRG G+G+++P   +  PLE+G
Sbjct: 438 FMGALPGMVLMAAADEVELARMVATAAEIDDRPSAFRYPRGEGLGLDMPAIAE--PLEIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRI+ EG  VA++ +GT +   L A+ LL + GL  TV DARF KPLD  L+  LA+ H
Sbjct: 496 KGRIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREH 555

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           E +ITVEEGS+GGFG+ V+Q LAQ G LD  +K R L LPD + D   P    AQAGL  
Sbjct: 556 EAIITVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDA 615

Query: 539 SHIAATVFNILG 550
             I     + +G
Sbjct: 616 EGILRGALSAMG 627


>gi|126736182|ref|ZP_01751925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
 gi|126714348|gb|EBA11216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. CCS2]
          Length = 637

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 299/550 (54%), Positives = 386/550 (70%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSES YD FG  HSSTSISA LG AV RDL     + +A+IGDGA
Sbjct: 94  IRTLRTEGGLSGFTKRSESPYDPFGAAHSSTSISAALGFAVARDLGAGGGDAIAIIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG+L   +IVILNDN ++S+         PP GA+SS LSRL +  P 
Sbjct: 154 MSAGMAYEAMNNAGHLGKRLIVILNDN-EMSIA--------PPTGAMSSYLSRLYAGEPF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +E +  AKG    +  P  E A +  +  + M  G   TLFEELG  Y+GP+DGH+++ L
Sbjct: 205 QEFKAAAKGAVSLLPEPFREGAKRAKDMLKHMTVGG--TLFEELGFSYLGPIDGHDMEQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L  VK+ +  GP+LIH +T+KG+GY  AE+A+DK H  AKFD  TG+Q K+ +   S
Sbjct: 263 LSVLRTVKD-RADGPILIHAITKKGKGYAPAERASDKGHATAKFDVITGEQKKAPSNAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F+E+L   A  D  + A+ AAM  GTGL  F+ R+ +RCFDVGIAEQHAVTF+AGL
Sbjct: 322 YTSVFSESLCKLAADDPKICAVTAAMPDGTGLTKFMERYTSRCFDVGIAEQHAVTFSAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G++PFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFDV ++
Sbjct: 382 AAGGMRPFCALYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFDVGYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP  VVMA +DEAEL  MV TAAA D+ P  FR+PRG G+GVE+P   +   LE+GKG
Sbjct: 442 SNLPGFVVMAAADEAELVRMVTTAAAHDEGPIAFRFPRGEGVGVEMPETPE--LLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VA+L +GT +Q  ++A   LE+ G++ TVADARF KPLD  LI  LA  H+ 
Sbjct: 500 RMIREGAQVAILSFGTRLQEVMSACEALEAKGIKPTVADARFAKPLDRELILQLAADHDA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFGSHV Q LA +G+ D  +K+R +VLPD +ID  SP      AG+   H
Sbjct: 560 LITVEEGAVGGFGSHVAQLLADEGVFDHGLKYRSMVLPDTFIDQASPKVMYDVAGMNAEH 619

Query: 541 IAATVFNILG 550
           I A V  +LG
Sbjct: 620 IEAKVLEVLG 629


>gi|197104378|ref|YP_002129755.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
           HLK1]
 gi|254782082|sp|B4RGW0.1|DXS_PHEZH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|196477798|gb|ACG77326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Phenylobacterium zucineum
           HLK1]
          Length = 638

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 318/550 (57%), Positives = 384/550 (69%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ES+YD FG  H++TSISA LG    RD +GR N VVAVIGDG+
Sbjct: 92  IRTLRQGGGLSGFTKRAESDYDPFGAAHAATSISAALGFCAARDREGRDNKVVAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA      + VILNDN  +S+         PPVG +S+ ++RL S    
Sbjct: 152 MSAGMAYEAMNNAYETTKQLTVILNDN-DMSIA--------PPVGGMSAYMARLVSGGGY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + LR + K V++    P+ E A K +EYARGM++G   T FEELG YY+GP+DGH++D L
Sbjct: 203 QSLRNLGKAVSRAFPRPLQEAARKAEEYARGMVTGG--TFFEELGFYYVGPIDGHDMDAL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +L+  +      PVL+HVVT+KG+GY  AEKAADKYHGV KFD  TG Q KS A   S
Sbjct: 261 VHVLQNARKIDDK-PVLVHVVTQKGKGYAPAEKAADKYHGVVKFDVVTGAQAKSQAAAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ L+  AE D+ VVAI AAM  GTGL+LF +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFAQELVKHAERDERVVAITAAMPSGTGLDLFGQRFPERTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPF AIYS+F+QR YDQVVHDV +Q LPVRFA+DRAGLVGADGPTH GSFDV FM
Sbjct: 380 AADGMKPFAAIYSTFLQRGYDQVVHDVAIQSLPVRFAIDRAGLVGADGPTHAGSFDVGFM 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP MVVM P+DEAEL   +ATA AIDDRPS FRYPRG G+GVE+P      PLE+G+G
Sbjct: 440 GQLPGMVVMGPADEAELARAIATAVAIDDRPSAFRYPRGEGVGVEIP--ALADPLEIGRG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L +GT +   L A+ +L + GL  TVADARF KPLD  L+  LA+ HE 
Sbjct: 498 RIVREGTAVAILSFGTRLGESLKAADMLAARGLSATVADARFAKPLDVDLLLRLAREHEA 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG++GGFG  V+  LA+ G LD  +K R L LPD + D   P    AQAGL    
Sbjct: 558 LITVEEGAVGGFGGFVLHALAEHGALDRGLKIRTLTLPDIFQDQDKPEAMYAQAGLDAEG 617

Query: 541 IAATVFNILG 550
           I       LG
Sbjct: 618 IVRAALAALG 627


>gi|224004236|ref|XP_002295769.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209585801|gb|ACI64486.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 747

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 307/605 (50%), Positives = 403/605 (66%), Gaps = 49/605 (8%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-KGRKNNVVAVIGDGAM 61
           T+RQ  G+SGF KR ESEYD FG GHSSTSISA  GM+V + L   RKNN +AVIGDGA+
Sbjct: 142 TLRQLGGISGFCKRKESEYDSFGAGHSSTSISAAQGMSVAKSLLNKRKNNCIAVIGDGAI 201

Query: 62  TAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNRPL 120
           T G AYEAMNNAGYL S MIV+LNDN QVSLPT T   G + P   LS+  S L  ++P 
Sbjct: 202 TGGMAYEAMNNAGYLSSRMIVVLNDNGQVSLPTGTQTAGGVRPASQLSAYTSNLIVSKPF 261

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ R+ AK + +     + ++  ++DEYARG+++G   T+FEELG +Y+GP+DGH++D++
Sbjct: 262 QDFRDFAKSLNRLFPENVQDVNKRLDEYARGLVTGG--TVFEELGFFYVGPIDGHDLDNM 319

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE+++++ +T PVL+H+ T KG+GYP A  A+DK HGV KFD ATG Q K  A + S
Sbjct: 320 VPILEKLRDSDSTKPVLLHIKTNKGQGYPPALAASDKMHGVGKFDIATGIQVKGKAASPS 379

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
            T+ FA A+I  A  D+ +V I AAM GGTG+++F RRFP R +DVGIAEQHAVTFAAG+
Sbjct: 380 LTSIFANAMIDAATEDRAIVGITAAMPGGTGMDIFGRRFPKRTYDVGIAEQHAVTFAAGM 439

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYS+FMQR YDQVVHDV +Q LPVR  +DRAG+VG DGPTH G +D+ ++
Sbjct: 440 ACEGLKPFCCIYSTFMQRGYDQVVHDVAIQNLPVRMILDRAGVVGNDGPTHHGCYDLAYL 499

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRG---------NGIGVELPPGN- 410
            C+PN+ +M+PSDE EL +MV T AA DD P+  RYPRG         N  G EL  G  
Sbjct: 500 GCIPNLTIMSPSDEIELKNMVMTCAAFDDGPTVLRYPRGVGYGAEKLQNLFGYELENGEV 559

Query: 411 --KGIPLEVGKGRI------------------------------LIEGERVALLGYGTAV 438
             KG  +++GKGRI                              L++  R+A+L  GT +
Sbjct: 560 PAKGEVIKIGKGRIIRRPGGIHALKEELTANGSSDSRMGAGSRGLLKENRIAILTLGTRL 619

Query: 439 QSCLAASALLE--SNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHV 496
              L A+  +E  +  L +TVADARF KPLD  LIR L+ ++ +++TVEEGSIGGFG HV
Sbjct: 620 SEALVAADEIEGANPDLAVTVADARFMKPLDEDLIRELSDNNGIIVTVEEGSIGGFGDHV 679

Query: 497 VQFLAQDGLL-DGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 555
           + FL+ DG L DG +K+RP+VLPD Y +  +  +Q   AGL   HI  TV  +     EA
Sbjct: 680 LHFLSLDGALDDGELKFRPMVLPDTYFEAATQYEQYEMAGLNSHHIRDTVLRLANVKVEA 739

Query: 556 LEIMS 560
             +++
Sbjct: 740 APVLA 744


>gi|85709905|ref|ZP_01040970.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
 gi|85688615|gb|EAQ28619.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter sp. NAP1]
          Length = 641

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/557 (53%), Positives = 387/557 (69%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  HSSTSISA LG A+   L  +    +AVIGDGA
Sbjct: 94  IRTIRQGGGLSGFTKRAESEYDPFGAAHSSTSISAALGFAIANKLNDKPGRGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ L+R+ S+   
Sbjct: 154 MSAGMAYEAMNNAAQAGNRLVVILNDN-DMSI--------APPVGGLSAYLARMVSSSEY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +A    K++   +H+   K +EY+RGM++G   TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGLRSLASKAVKKMSRRLHDALGKAEEYSRGMVTGG--TLFEELGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++T + GPVLIHVVTEKG+GY  AE++ADKYHGV KF+  TG++ K SA   +
Sbjct: 263 IPVLENVRDT-SEGPVLIHVVTEKGKGYKPAEESADKYHGVPKFNVVTGEKQKGSAGAPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F + L   A+ DK + AI AAM  GTG++ F +R P R FDVGIAEQH VTFAAGL
Sbjct: 322 YQNVFGDTLADLADTDKRICAITAAMPSGTGVDRFAQRHPDRSFDVGIAEQHGVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+T++
Sbjct: 382 AAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGCTHAGSFDITYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HM  TA   D+ P  FRYPRG+G+GV LP   +   LE+GKG
Sbjct: 442 ATLPNMVVMAAADEAELVHMTYTAVEYDEGPIAFRYPRGSGVGVPLPETPQ--KLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG +VA+L  G  ++    A+  LE+ GL  TVAD RF KPLD  LI  L ++HEV
Sbjct: 500 RLVREGSKVAILSLGARLEEAKKAADQLEAKGLSTTVADMRFAKPLDEDLIARLMRTHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++T+EEG+IGG G+HV+ +   +GL D  +K R + LPD + D  SP  Q  +AGL+  H
Sbjct: 560 VVTIEEGAIGGLGAHVLTYATDEGLTDNGLKVRTMRLPDTFQDQDSPDKQYEEAGLSAPH 619

Query: 541 IAATVFNILGQTREALE 557
           I  TV   L     ++E
Sbjct: 620 IVDTVLKALKHNSTSIE 636


>gi|254563642|ref|YP_003070737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
 gi|254270920|emb|CAX26925.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens DM4]
          Length = 658

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 322/559 (57%), Positives = 394/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 93  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 152

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 153 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 203

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 204 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 262

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 263 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 321

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 322 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 381

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 382 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 441

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA SDEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 442 THAGAFDLAYLCCLPNMTVMAASDEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 499

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 500 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 559

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  LA+ G+LD G V+ R L LPD Y DH  
Sbjct: 560 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDK 619

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 620 PEKMYAEAGLDAEGILKAV 638


>gi|170744434|ref|YP_001773089.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
 gi|168198708|gb|ACA20655.1| deoxyxylulose-5-phosphate synthase [Methylobacterium sp. 4-46]
          Length = 663

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 318/562 (56%), Positives = 392/562 (69%), Gaps = 28/562 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG----------RKN 50
           + T+RQ  GLSGFTKR+ES YD FG  HSSTSISAGLGMAV RDL             + 
Sbjct: 93  IRTLRQGGGLSGFTKRAESPYDPFGAAHSSTSISAGLGMAVARDLAEAAARARGETPERR 152

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           NVVAVIGDG+++AG AYEAMNNAG L S ++VILND               PPVGA+S+ 
Sbjct: 153 NVVAVIGDGSISAGMAYEAMNNAGALRSRLVVILNDMSIA-----------PPVGAMSAY 201

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    R LR+ A+   + +   +++ A + +EYARG+++G G T+FEELG +Y+G
Sbjct: 202 LARLVSGDTYRSLRDTARQFGRLLPKALYDTAVRAEEYARGILAGGG-TMFEELGFHYVG 260

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           P+DGHN+D L+ IL+ V++    GPVL+HVVT+KG+GY  AE AAD+ H V KFD  +G+
Sbjct: 261 PIDGHNLDHLLPILKNVRDAPE-GPVLVHVVTQKGKGYAPAEAAADRGHAVVKFDVVSGQ 319

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+ A   +YT  F E+L+  A+ D  VVAI AAM  GTG++LF +  P R FDVGIAE
Sbjct: 320 QVKAKANAPTYTRVFGESLVKAADADDKVVAITAAMPSGTGVDLFAKAHPGRTFDVGIAE 379

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFAAGLA EG +PFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG T
Sbjct: 380 QHAVTFAAGLAAEGYRPFCAIYSTFLQRAYDQVVHDVALQNLPVRFALDRAGLVGADGAT 439

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPNMVVMA +DEAEL HMVATA A D  P  FRYPRG G+GV+LP   
Sbjct: 440 HAGAFDLAYLCCLPNMVVMAAADEAELVHMVATAHAHDAGPIAFRYPRGEGVGVDLP--E 497

Query: 411 KGIPLEVGKGRIL--IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           KG  L +G+GR++   EG RVAL+  GT +   L A+  LE  G+ +TVADARF KPLD 
Sbjct: 498 KGEVLALGRGRVIRRPEGARVALVSLGTRLAEALKAAEQLEERGIGVTVADARFAKPLDE 557

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
            L+  LA SHEVL+TVEEGS GGFG+ V+  LA  G LD GTV+ R L LPD Y DH +P
Sbjct: 558 GLLLDLAGSHEVLVTVEEGSTGGFGAMVLHLLAGRGALDAGTVRVRTLTLPDSYQDHDTP 617

Query: 528 ADQLAQAGLTPSHIAATVFNIL 549
               AQAGL    I   V + L
Sbjct: 618 ERMYAQAGLDAPAIVRAVEHAL 639


>gi|332185973|ref|ZP_08387719.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
 gi|332013788|gb|EGI55847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. S17]
          Length = 641

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/549 (56%), Positives = 379/549 (69%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LG AV   L G     +AVIGDGA
Sbjct: 94  IRTIRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFAVANKLAGTPGKGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS+ LSR+ S+R  
Sbjct: 154 MSAGMAYEAMNNAEQAGNRLIVILNDN-DMSI--------APPVGGLSAYLSRIVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+V K + K+   P+ + A K DE+ARGM  G   TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGVRDVFKKLAKRFPRPIQKAARKTDEFARGMTMGG--TLFEELGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ +  GP+LIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+     +
Sbjct: 263 IPVLENVRDAEE-GPILIHVVTKKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPGPPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L  EAE D  + AI AAM  GTGL+ F    P R FDVGIAEQHAVTFAAGL
Sbjct: 322 YQNVFGETLSREAESDPRICAITAAMPSGTGLDKFAAAHPDRFFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMA +DEAEL HMV T    D  P   RYPRGNG+GV LP   +   LE+GKG
Sbjct: 442 ASLPNMVVMAAADEAELVHMVHTCVNHDSGPIAVRYPRGNGVGVALPETPE--LLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG++VA+L  GT +   L A+  LE+ GL  +VAD RF KPLD ALIR L  +HEV
Sbjct: 500 RLVREGKKVAILSLGTRLGEALRAADALEAKGLSTSVADLRFAKPLDEALIRRLLTTHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EE +IGG G+HV+   + +GL+D  +K R + LPD + D   P  Q AQAGL    
Sbjct: 560 AVTIEENAIGGLGAHVLTMASDEGLIDAGLKLRTMRLPDLFQDQDKPEVQYAQAGLDADA 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVETVLKAL 628


>gi|218532564|ref|YP_002423380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens CM4]
 gi|218524867|gb|ACK85452.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           CM4]
          Length = 658

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 321/559 (57%), Positives = 394/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 93  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 152

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 153 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 203

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 204 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 262

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 263 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 321

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 322 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 381

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 382 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 441

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 442 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 499

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 500 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 559

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  LA+ G+LD G V+ R L LPD Y DH  
Sbjct: 560 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLAERGVLDTGRVRVRTLTLPDSYQDHDK 619

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 620 PEKMYAEAGLDAEGILKVV 638


>gi|395491697|ref|ZP_10423276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26617]
          Length = 641

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 305/549 (55%), Positives = 377/549 (68%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSESEYD FG  HSSTSISA LG A+   +  +    +AVIGDGA
Sbjct: 94  IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISASLGFAIANKIADKPGKAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ LSR+ S+R  
Sbjct: 154 MSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLSRIVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE+AK + K++  P     +K DE+ARG+    G TLFEELG YY+GP+DGHN++ L
Sbjct: 205 LGFRELAKRLAKKLPRPFASSLSKADEFARGL--AMGGTLFEELGFYYVGPIDGHNLEQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ +  GP+L+HVVT+KG+GY  AE AADKYHGV KFD  +G Q K+      
Sbjct: 263 IPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVISGVQTKAPPGPPQ 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F   L+ EAE D  + AI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YQNVFGAQLLKEAESDPTICAITAAMPSGTGLDGFSKAFPDRFFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPNMVVMAPSDEAEL HM  TAA  D  P   RYPRGNG GV +P   +   LE+GKG
Sbjct: 442 ATLPNMVVMAPSDEAELVHMTHTAALHDSGPIAVRYPRGNGTGVAMPEVAE--RLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G +VA++  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  +HEV
Sbjct: 500 RIVRQGHKVAIMALGTRLGEALKAADALEAKGLSTTVADLRFAKPLDEELIRKLLTTHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
            +T+EE S+GG G+HV+ F +  GL+D  +K R L LPD + D   P  Q A+AGL    
Sbjct: 560 AVTIEESSVGGLGAHVLTFASDTGLIDAGLKLRTLRLPDVFQDQDKPEAQYAEAGLDADA 619

Query: 541 IAATVFNIL 549
           I  TV   L
Sbjct: 620 IVETVLKAL 628


>gi|404254956|ref|ZP_10958924.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26621]
          Length = 641

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/551 (55%), Positives = 378/551 (68%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSESEYD FG  HSSTSISA LG A+   +  +    +AVIGDGA
Sbjct: 94  IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISASLGFAIANKIADKPGKAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ LSR+ S+R  
Sbjct: 154 MSAGMAYEAMNNAAQAGNRLVVILNDN-DMSI--------APPVGGLSAYLSRIVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE+AK + K++  P     +K DE+ARG+    G TLFEELG YY+GP+DGHN++ L
Sbjct: 205 LGFRELAKRLAKKLPRPFASSLSKADEFARGL--AMGGTLFEELGFYYVGPIDGHNLEQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ +  GP+L+HVVT+KG+GY  AE AADKYHGV KFD  +G Q K+      
Sbjct: 263 IPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVISGVQTKAPPGPPQ 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F   L+ EAE D  + AI AAM  GTGL+ F + FP R FDVGIAEQHAVTFAAGL
Sbjct: 322 YQNVFGAQLLKEAESDPTICAITAAMPSGTGLDGFSKAFPDRFFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPNMVVMAPSDEAEL HM  TAA  D  P   RYPRGNG GV +P     +P  LE+G
Sbjct: 442 ATLPNMVVMAPSDEAELVHMTHTAALHDSGPIAVRYPRGNGTGVAMPE----VPERLEIG 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRI+ +G +VA++  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  +H
Sbjct: 498 KGRIVRQGHKVAIMALGTRLGEALKAADALEAKGLSTTVADLRFAKPLDEELIRKLLTTH 557

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EV +T+EE S+GG G+HV+ F +  GL+D  +K R L LPD + D   P  Q A+AGL  
Sbjct: 558 EVAVTIEESSVGGLGAHVLTFASDTGLIDAGLKLRTLRLPDVFQDQDKPEAQYAEAGLDA 617

Query: 539 SHIAATVFNIL 549
             I  TV   L
Sbjct: 618 DAIVETVLKAL 628


>gi|240138460|ref|YP_002962932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
 gi|240008429|gb|ACS39655.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Methylobacterium extorquens AM1]
          Length = 660

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 321/559 (57%), Positives = 394/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 96  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 155

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 156 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 206

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 207 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 265

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 266 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 324

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 325 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 384

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 385 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 444

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 445 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 502

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 503 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 562

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  LA+ G+LD G V+ R L LPD Y DH  
Sbjct: 563 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLAERGVLDTGRVRVRTLTLPDSYQDHDK 622

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 623 PEKMYAEAGLDAEGILKAV 641


>gi|163853706|ref|YP_001641749.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens PA1]
 gi|163665311|gb|ABY32678.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           PA1]
          Length = 658

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 321/559 (57%), Positives = 394/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 93  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 152

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 153 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 203

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 204 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 262

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 263 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 321

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 322 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 381

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 382 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 441

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 442 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 499

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 500 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 559

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  LA+ G+LD G V+ R L LPD Y DH  
Sbjct: 560 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDK 619

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 620 PEKMYAEAGLDAEGILKVV 638


>gi|114326885|ref|YP_744042.1| 1-deoxy-D-xylulose-5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315059|gb|ABI61119.1| 1-deoxy-D-xylulose 5-phosphate synthase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 674

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 318/571 (55%), Positives = 402/571 (70%), Gaps = 33/571 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLK-------GRKNNVV 53
           + T+R   GLSGFTKRSESEYD FG GHSSTSISAGLGMAV RDL+           +V+
Sbjct: 105 IRTLRMGGGLSGFTKRSESEYDPFGAGHSSTSISAGLGMAVARDLRRAAGEVGAGPEHVI 164

Query: 54  AVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSR 113
           AVIGDGAM+AG  YEAMNNAG L S ++VILNDN  +S+         PPVGA+S+ LSR
Sbjct: 165 AVIGDGAMSAGMVYEAMNNAGSLKSRLVVILNDN-DMSI--------APPVGAMSAYLSR 215

Query: 114 LQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVD 173
           L S+R    LR++A  + +     +   A + +EYARG+++G   TLFEELG YY+GP+D
Sbjct: 216 LLSSRSFLNLRDLAGKMARHFPRGIERTARRAEEYARGILTGG--TLFEELGFYYVGPID 273

Query: 174 GHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK 233
           GHN+D L+ +L  V++ + TGP+L+H +T KG GY  AE +ADKYH V++F+  TG+Q K
Sbjct: 274 GHNLDHLLPVLRNVRDAEETGPILVHAITRKGHGYAPAEASADKYHAVSRFNVVTGEQIK 333

Query: 234 ------SSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVG 287
                 +     +YT  FAEALIA AE +  VVAI+AAM  GTGL+ F +RFP RCFDVG
Sbjct: 334 PAPVPGAKPAPPTYTKVFAEALIAAAEENPRVVAINAAMPSGTGLDAFEKRFPDRCFDVG 393

Query: 288 IAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGAD 347
           IAEQHAVTFAAGLA EG+ PFCA+YS+F+QR YDQ+VHDV +Q LPVRFA+DRAGLVGAD
Sbjct: 394 IAEQHAVTFAAGLAVEGMVPFCALYSTFLQRGYDQLVHDVAIQHLPVRFAIDRAGLVGAD 453

Query: 348 GPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP 407
           G TH GSFD+ ++ CLP M++M+PSDEAEL H VAT AA D  PS  RYPRG G+GV LP
Sbjct: 454 GATHAGSFDMAYLGCLPGMMIMSPSDEAELVHAVATVAAYDSGPSAVRYPRGEGVGVALP 513

Query: 408 PGNKGI----PLEVGKGRILIEGER-VALLGYGTAVQSCLAASALLESNGLRLTVADARF 462
              KG      L +G+GRI+ EG   +A+L  GT +Q  L A+  L ++GL +TVAD RF
Sbjct: 514 RDEKGRLRGDVLPIGRGRIVREGRSGIAILSIGTRLQDALLAADDLAAHGLTVTVADGRF 573

Query: 463 CKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDG----TVKWRPLVLP 518
            KPLD AL+  LA+ ++VL+ VEEGSIGG+ SHV+Q LAQ GLLD      +K R ++LP
Sbjct: 574 VKPLDTALVERLARENDVLVVVEEGSIGGYASHVMQHLAQAGLLDARDGHALKLRSMILP 633

Query: 519 DRYIDHGSPADQLAQAGLTPSHIAATVFNIL 549
           DRYIDH +  +Q+ QAGL    I  TV  ++
Sbjct: 634 DRYIDHDTQPNQIRQAGLDHQAIRDTVLKLV 664


>gi|114765816|ref|ZP_01444909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelagibaca bermudensis
           HTCC2601]
 gi|114541815|gb|EAU44852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. HTCC2601]
          Length = 641

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 308/554 (55%), Positives = 383/554 (69%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+R+  GLSGFTKRSES YD FG GHSSTSISA LG AV RDL G       + +AVI
Sbjct: 94  IRTLRKKGGLSGFTKRSESPYDPFGAGHSSTSISAALGFAVARDLGGVCDTGAGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDGAM+AG AYEAMNNAG+L   +IVILNDN ++S+         PP GA+SS LSRL +
Sbjct: 154 GDGAMSAGMAYEAMNNAGHLGKRLIVILNDN-EMSI--------APPTGAMSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P ++L+  AKG    +  P  E A +  E  +GM  G   TLFEELG  Y+GP+DGH+
Sbjct: 205 EEPFQDLKAAAKGAVSLLPPPFREGAKRAKEMLKGMTVGG--TLFEELGFDYLGPLDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ +L  V+  +   P+L+HV+T+KG+GY  AE++AD+ H  AKFD ATG+Q K+ +
Sbjct: 263 LHQLLPVLRMVR-ARANKPILLHVLTKKGKGYGPAEESADRGHARAKFDVATGEQKKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              +YT  FA+ L   A  D  + A+ AAM  GTGL+L   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPAYTKVFAKELTRLAAEDSRICAVTAAMPDGTGLDLMAERYPSRVFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH G++D
Sbjct: 382 AAGLAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGAYD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + FMA LP MVVMA +DEAEL HMVATAAA D+ P  FRYPRG G GVE+P    G  LE
Sbjct: 442 IAFMANLPGMVVMAAADEAELKHMVATAAAHDEGPIAFRYPRGEGEGVEMP--EAGEILE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G+GRI+ EG+RVALL +GT +     A   L + G+  TVADARF KPLD  L   LA 
Sbjct: 500 IGRGRIVSEGKRVALLSFGTRLGEVRKACEKLSARGITPTVADARFAKPLDRDLTLRLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LIT+EEGS+GGFGSHV Q L+ +G+ D  +K+R +VLPD +IDH SP D    AGL
Sbjct: 560 EHEALITIEEGSVGGFGSHVAQLLSDEGVFDHGLKFRSMVLPDTFIDHASPDDMYESAGL 619

Query: 537 TPSHIAATVFNILG 550
              HI   V   LG
Sbjct: 620 DARHIEEKVLTTLG 633


>gi|295688781|ref|YP_003592474.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
 gi|295430684|gb|ADG09856.1| deoxyxylulose-5-phosphate synthase [Caulobacter segnis ATCC 21756]
          Length = 640

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 312/550 (56%), Positives = 383/550 (69%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKR+ESEYD FG  H++TSISA LG    RD KG  N+VVAVIGDG+
Sbjct: 92  IRTLRQGGGLSGFTKRAESEYDPFGAAHAATSISAALGFCAARDAKGEDNSVVAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           + AG AYEAMN A      +IVILNDN  +S+         PPVG +S+ L+ L S    
Sbjct: 152 LGAGMAYEAMNAATDTTKRLIVILNDN-DMSIA--------PPVGGMSAYLANLVSGGAY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R +R++ K V +++  PM E A K +EYARGM++G   T FEELG +Y+GP+DGH++D L
Sbjct: 203 RSVRKLGKTVVEKLPSPMREAARKAEEYARGMVTGG--TFFEELGFHYVGPIDGHDMDAL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V++L+  K      PVL+H VT+KG+GY  AE A DK H V KFD  TG+Q KS+    S
Sbjct: 261 VSVLKNAKAFADK-PVLVHCVTQKGKGYAPAEGADDKLHAVVKFDVVTGQQQKSAGGPPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ LI +AE D  +VAI AAM  GTGL+LF + FP R FDVGIAEQHAVTFAAGL
Sbjct: 320 YTKVFAQELIKQAEKDDKIVAITAAMPSGTGLDLFGKAFPDRTFDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPF AIYS+F+QR YDQVVHDV +Q LPVRFAMDRAGLVGADGPTH GSFD+ FM
Sbjct: 380 AADGMKPFTAIYSTFLQRGYDQVVHDVAIQGLPVRFAMDRAGLVGADGPTHAGSFDIGFM 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP MV+MA +DE EL  MVATAAAIDDRPS FRYPRG G+G+E+P      PLE+GKG
Sbjct: 440 GALPGMVLMAAADEVELARMVATAAAIDDRPSAFRYPRGEGLGLEIPANVD--PLEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA++ +GT +   L A+ LL + GL  TV DARF KPLD  L+  LA+ HE 
Sbjct: 498 RIVREGTSVAIVSFGTRLSESLKAADLLAARGLSATVCDARFAKPLDLDLLLRLAREHEA 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVEEGS+GGFG+ V+Q LAQ G LD  +K R L LPD + D   P    AQAGL    
Sbjct: 558 IVTVEEGSMGGFGAFVLQALAQHGALDRGLKIRTLCLPDVFQDQDKPDAMYAQAGLDAEG 617

Query: 541 IAATVFNILG 550
           +     + LG
Sbjct: 618 VLRGALSALG 627


>gi|85375331|ref|YP_459393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Erythrobacter litoralis
           HTCC2594]
 gi|123099471|sp|Q2N6U5.1|DXS_ERYLH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|84788414|gb|ABC64596.1| 1-D-deoxyxylulose 5-phosphate synthase [Erythrobacter litoralis
           HTCC2594]
          Length = 640

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/557 (54%), Positives = 381/557 (68%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISAGLG AV   LKG     +AVIGDGA
Sbjct: 94  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAGLGFAVANKLKGEPGKAIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + +IVILNDN  +S+         PPVG LS  L+RL S+   
Sbjct: 154 MSAGMAYEAMNNAEQAGNRLIVILNDN-DMSIA--------PPVGGLSGYLARLMSSSEY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR +A  +T ++   +H    K +EY +G+++G   TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGLRSLASRMTAKVSRRVHTSLGKAEEYTKGLVTGG--TLFEELGFYYVGPIDGHNLDHL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ +  GP LIHV T KG+GY  AE +ADKYHGVAKFD  TG+Q KS+    +
Sbjct: 263 IPVLENVRDAEE-GPFLIHVRTVKGKGYAPAENSADKYHGVAKFDVVTGEQKKSTGGPPA 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F E L   A+ D  + AI AAM  GTG++ F +  P R FDVGIAEQH VTFAAGL
Sbjct: 322 YQNVFGETLAKLADSDPRICAITAAMPSGTGVDKFAKAHPDRAFDVGIAEQHGVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PF AIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT++
Sbjct: 382 AAQGMRPFAAIYSTFLQRAYDQVVHDVAIQNLPVRFAIDRAGLVGADGSTHAGSFDVTYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LPN VVMA +DEAEL HM  TAA  D  P  FRYPRG GIG++LP   +   LE+GKG
Sbjct: 442 ATLPNFVVMAAADEAELVHMTYTAAEHDSGPIAFRYPRGGGIGIDLPETPE--KLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+  G +VALL  GT ++    A+  LE+ GL  T+AD RF KPLD  LI  L K+HEV
Sbjct: 500 RIVKHGSKVALLSLGTRLEEAKRAADELEAKGLSTTIADMRFAKPLDTELIAQLMKNHEV 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++T+EE SIGG G+HV+ + + +GL D  +K R + LPD +I+  +P  Q  +AGLT  H
Sbjct: 560 VVTIEEASIGGLGAHVLTYASDEGLTDAGLKIRTMRLPDAFIEQDAPEKQYDEAGLTAPH 619

Query: 541 IAATVFNILGQTREALE 557
           I  TV   L Q    +E
Sbjct: 620 IVDTVLKALRQNSAGVE 636


>gi|163851366|ref|YP_001639409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens PA1]
 gi|163662971|gb|ABY30338.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           PA1]
          Length = 657

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 321/559 (57%), Positives = 394/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 93  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 152

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 153 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 203

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 204 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 262

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 263 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 321

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 322 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 381

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 382 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 441

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 442 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 499

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 500 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 559

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  LA+ G+LD G V+ R L LPD Y DH  
Sbjct: 560 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDK 619

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 620 PEKMYAEAGLDAEGILKAV 638


>gi|254293554|ref|YP_003059577.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hirschia baltica ATCC
           49814]
 gi|254042085|gb|ACT58880.1| deoxyxylulose-5-phosphate synthase [Hirschia baltica ATCC 49814]
          Length = 642

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 307/551 (55%), Positives = 382/551 (69%), Gaps = 16/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  H+ TSISAG G A  RDLK    NVV VIGDG+
Sbjct: 92  IRTLRQGGGLSGFTKRSESEYDPFGAAHAGTSISAGAGFATARDLKDEDRNVVCVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEAMN+ G +   MIVILNDN  +S+         PPVGALS  LS+  S++  
Sbjct: 152 MTAGMAYEAMNHMGGMHKRMIVILNDN-DMSIA--------PPVGALSHYLSKTVSSKGY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+ R+  K + K +G  + + A K + YAR      G  +F+ LG YY+GP+DGH++D L
Sbjct: 203 RQFRKAGKMMAKTVG--LEKPAKKAEHYARDF--ALGGAMFDALGFYYVGPIDGHDLDTL 258

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ K  GPVL+HVVTEKG+G+  AEK+ADKYHGV+KF+  TG+Q KS     S
Sbjct: 259 IPVLENVRDMKN-GPVLVHVVTEKGKGFEPAEKSADKYHGVSKFNVITGEQAKSKPNAPS 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ LI  A+ D+ +V I AAM  GTG++ F   FP R FDVGIAEQH VTFAA +
Sbjct: 318 YTNVFAQELIRLAKDDERIVGITAAMPSGTGMDKFGDAFPERMFDVGIAEQHGVTFAAAM 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G+KPFCAIYS+F+QRAYD VVHDV +QKLPVRFA+DRAGLVGADG TH GSFD+ ++
Sbjct: 378 AADGMKPFCAIYSTFLQRAYDSVVHDVAIQKLPVRFAIDRAGLVGADGATHAGSFDIGYL 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP+ V+MA SDEAEL  MVATA AIDD PS FR+PRG GIG++L    +  PLE+GKG
Sbjct: 438 GALPDFVLMAASDEAELQRMVATAHAIDDCPSAFRFPRGEGIGIDL--WERAEPLEIGKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  +A+L  G  +Q  L A+ +LE+ G   TVADARF KPLD  LI  LAK HEV
Sbjct: 496 RIVKEGTTIAILALGARLQEALHAADMLEAQGFSTTVADARFAKPLDTDLIERLAKEHEV 555

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+ GGFGS V++ LA+ G LD  ++ RP+ LPD + D   P      AGL+   
Sbjct: 556 LITVEEGARGGFGSFVLEHLAKVGALDNGLRIRPMTLPDVFQDQNKPELMYEDAGLSAKA 615

Query: 541 IAATVFNILGQ 551
           IA      LG+
Sbjct: 616 IATQAIAALGR 626


>gi|240141131|ref|YP_002965611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
 gi|240011108|gb|ACS42334.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens AM1]
          Length = 658

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 320/559 (57%), Positives = 393/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 93  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 152

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 153 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 203

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 204 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 262

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 263 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 321

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 322 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 381

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 382 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 441

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT    D  P   RYPRG G+G+ELP  
Sbjct: 442 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATCHVHDSGPIALRYPRGEGVGIELP-- 499

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 500 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 559

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  LA+ G+LD G V+ R L LPD Y DH  
Sbjct: 560 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLAERGVLDTGRVRVRTLTLPDLYQDHDK 619

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 620 PEKMYAEAGLDAEGILKIV 638


>gi|126741030|ref|ZP_01756713.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
 gi|126717956|gb|EBA14675.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. SK209-2-6]
          Length = 642

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 303/554 (54%), Positives = 378/554 (68%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGR----KNNVVAVI 56
           + T+R  +GLSGFTKRSES YD FG  HSSTSISA LG +V RDL G       + +AVI
Sbjct: 94  IRTLRMKEGLSGFTKRSESPYDPFGAAHSSTSISAALGFSVARDLGGVIPEGNGDAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L+  + V+LNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLNKRLFVVLNDN-EMSI--------APPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+ VAKG    +  P  E A +  +  +GM    G TLFE LG  Y+GP+DGH+
Sbjct: 205 EEPFQELKAVAKGAASLLPEPFREGAKRAKDMLKGM--AVGGTLFESLGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  +K  + TGPVLIHV+T+KG+GY  AE A DK H  AKFD  TGKQ K+ +
Sbjct: 263 MDQLLPVLRTLK-ARATGPVLIHVLTKKGKGYGPAETARDKGHATAKFDVLTGKQHKAPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F   L+  A  D  + A+ AAM  GTGL L   R+P+R FDVGIAEQH VTF
Sbjct: 322 NAPSYTSVFGNELVKLAAKDDKICAVTAAMPDGTGLALMAERYPSRTFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           A  LA  G+KPFCA+YS+F+QR YDQVVHDV LQ LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AGALAAGGMKPFCAMYSTFLQRGYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + F+A LP+MVVMA +DEAEL HMVATAAA DD P  FRYPRG G GVE+P   +   LE
Sbjct: 442 IGFLANLPSMVVMAAADEAELVHMVATAAAYDDGPIAFRYPRGEGEGVEMP--EEPQILE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GK R++ EG RVALL +GT +     A+  L + G+  T+ DARF KPLD  +I  LA 
Sbjct: 500 IGKSRMIQEGARVALLSFGTRLGETRKAAEALSAKGITPTIVDARFAKPLDREMILDLAA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +HE LIT+EEG++GGFGSHV Q L+ +G+ D   K+R +VLPD +ID  SP D    A +
Sbjct: 560 NHEALITIEEGAVGGFGSHVAQLLSDEGIFDRGFKFRSMVLPDSFIDQASPKDMYEAAAM 619

Query: 537 TPSHIAATVFNILG 550
               I A V  +LG
Sbjct: 620 NAPQIEAKVLEVLG 633


>gi|218530174|ref|YP_002420990.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           extorquens CM4]
 gi|218522477|gb|ACK83062.1| deoxyxylulose-5-phosphate synthase [Methylobacterium extorquens
           CM4]
          Length = 660

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 320/559 (57%), Positives = 393/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 96  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 155

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 156 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 206

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 207 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 265

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 266 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 324

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 325 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 384

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 385 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 444

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 445 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 502

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G+PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+  TVADARF KPLD
Sbjct: 503 ETGVPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAATVADARFAKPLD 562

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  L + G+LD G V+ R L LPD Y DH  
Sbjct: 563 AELIVDLAMSHEVLVTVEEGSVGGFGAMVLHLLTERGVLDTGRVRVRTLTLPDVYQDHDK 622

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 623 PEKMYAEAGLDAEGILKAV 641


>gi|429768590|ref|ZP_19300736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           470-4]
 gi|429189010|gb|EKY29868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevundimonas diminuta
           470-4]
          Length = 636

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/551 (56%), Positives = 383/551 (69%), Gaps = 15/551 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFTKRSESEYD FG  H+STSISA LG A  RD KG  N VVAVIGDG+
Sbjct: 91  IRTLRQGGGLSGFTKRSESEYDPFGAAHASTSISAALGFAAARDAKGGNNRVVAVIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG AYEAMNNA    S  ++VILNDN  +S+         PPVG +S+ L++  S   
Sbjct: 151 MSAGMAYEAMNNAAEATSGQLMVILNDN-DMSIA--------PPVGGMSAYLAKQVSGGT 201

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            + +R+V K     +  P  + A K +EYARGMI G   TLFEELG YY+GP+DGH++++
Sbjct: 202 YQNIRKVGKKFVDHMPRPFRDAARKAEEYARGMIVGG--TLFEELGFYYVGPIDGHDMEN 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV IL+      T  PVL+HVVT+KG+GY  AE +ADK H V KFD  +GKQ K+ +   
Sbjct: 260 LVPILKNAAAI-TDRPVLVHVVTQKGKGYAPAESSADKLHAVVKFDVVSGKQAKAISNAP 318

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F   LI  A+ D  V+A+ AAM  GTGL+LF + FP R FDVGIAEQHAVTFAAG
Sbjct: 319 SYTKVFGTELIKHAQADPTVMAVTAAMPSGTGLDLFGQAFPDRTFDVGIAEQHAVTFAAG 378

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP CAIYS+F+QR YDQVVHDV +Q LPVRFAMDRAGLVGADG TH GSFD+ +
Sbjct: 379 LAADGMKPVCAIYSTFLQRGYDQVVHDVAIQSLPVRFAMDRAGLVGADGATHAGSFDIGY 438

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M  LP MV+MA +DEAEL  M++T+ AIDDRPS FRYPRG G+GV++P      PLE+GK
Sbjct: 439 MGALPGMVLMAAADEAELAAMISTSLAIDDRPSAFRYPRGEGVGVDIP--ELAAPLEIGK 496

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRI+ EG  VA+L  GT +Q  L A+ +L + G+  TVADARF KPLD  LI  LA+ HE
Sbjct: 497 GRIVREGTSVAILSLGTRLQESLKAADMLAAKGVSATVADARFAKPLDADLILRLAREHE 556

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
            LITVEEG++GGFG+ V+Q LA+ G LD  +K R L LPD + D   P    AQAGL   
Sbjct: 557 ALITVEEGAMGGFGAFVLQLLAKKGALDAGLKIRTLHLPDIFQDQDKPEVMYAQAGLNAE 616

Query: 540 HIAATVFNILG 550
           HIAA     LG
Sbjct: 617 HIAAAAVTALG 627


>gi|188584012|ref|YP_001927457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium populi
           BJ001]
 gi|179347510|gb|ACB82922.1| deoxyxylulose-5-phosphate synthase [Methylobacterium populi BJ001]
          Length = 658

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 318/559 (56%), Positives = 393/559 (70%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLK-----------GRK 49
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL            G++
Sbjct: 93  IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDDAEARAKGEAPGKR 152

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 153 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 203

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 204 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 262

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 263 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 321

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDVGIA
Sbjct: 322 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIA 381

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 382 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 441

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVELP  
Sbjct: 442 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDSGPIALRYPRGEGVGVELP-- 499

Query: 410 NKGIPLEVGKGRILI--EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLD 467
             G PL +G+GR++   EG RVALL  GT +   L A+  LE+ G+ ++VADARF KPLD
Sbjct: 500 ESGEPLAIGRGRVVRRPEGARVALLSLGTRLSEALKAADALEAEGVAVSVADARFAKPLD 559

Query: 468 HALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGS 526
             LI  LA SHEVL+TVEEGS+GGFG+ V+  L++ G+LD G V+ R L LPD Y DH  
Sbjct: 560 AELIVDLANSHEVLVTVEEGSVGGFGAMVLHLLSERGVLDAGRVRVRTLTLPDVYQDHDK 619

Query: 527 PADQLAQAGLTPSHIAATV 545
           P    A+AGL    I   V
Sbjct: 620 PEKMYAEAGLDAEGILKAV 638


>gi|61653206|gb|AAX48160.1| deoxyxylulose-5-phosphate synthase [uncultured proteobacterium
           DelRiverFos13D03]
          Length = 631

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 308/557 (55%), Positives = 386/557 (69%), Gaps = 14/557 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ  G+SGFTKRSES YD FG  HSSTSISA LG  +GRD+     + +AVIGDGA
Sbjct: 88  MHSLRQEGGVSGFTKRSESVYDPFGAAHSSTSISAALGFTLGRDMGQPTGDAIAVIGDGA 147

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEAMN AG+L   M VILNDN  +S+         PPVGAL+  L+ L  ++P 
Sbjct: 148 ITAGMAYEAMNAAGHLGKRMFVILNDN-DMSIA--------PPVGALNRYLNGLSRHKPF 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR++A+G    + GP+ E A +  +   GM SG+  TLFE+LG  YIGPVDGH++ DL
Sbjct: 199 DLLRDMAEGFEAALPGPLREGARRARQIVTGMPSGA--TLFEQLGFSYIGPVDGHSMPDL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L   K T+ TGPVLIH VT KG+GY  AE +ADKYHGVAKFD  +G Q K+ +   +
Sbjct: 257 LATLRAAK-TRATGPVLIHAVTVKGKGYAPAENSADKYHGVAKFDVVSGTQAKAKSNAPA 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F   L   A  D  +VA+ AAM  GTGL++   RFP R FDVGIAEQHAVTFAAG+
Sbjct: 316 YTSVFGRCLTEAAARDGKIVAVTAAMPTGTGLDIMAERFPARVFDVGIAEQHAVTFAAGM 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPF AIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FDV F+
Sbjct: 376 AASGLKPFVAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDVGFL 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA  DEAEL HMVATAAA D+ P  FRYPRG G GV++P  ++G  L++GKG
Sbjct: 436 ANLPGFVVMAAGDEAELAHMVATAAAYDEGPISFRYPRGEGSGVQMP--DQGQVLQIGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+L +G  VALL +G  +  CL A+  L + G+ +TVADARF KPLD  LI  LA+ H+ 
Sbjct: 494 RVLRQGSDVALLCFGAHLPECLLAAEGLAAQGISVTVADARFAKPLDTDLITQLARHHQA 553

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           +ITVE+G+ GGFG+ V++++A  G LD  V+ R L LPDR+I+  SPA   A AGL+ + 
Sbjct: 554 VITVEQGARGGFGAQVLEYMANSGGLDHGVRLRTLTLPDRFIEQASPAAMYADAGLSVAD 613

Query: 541 IAATVFNILGQTREALE 557
           I   V  +L Q  + L 
Sbjct: 614 ITRAVERVLPQRVQVLR 630


>gi|340779464|ref|ZP_08699407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acetobacter aceti NBRC
           14818]
          Length = 645

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/567 (55%), Positives = 390/567 (68%), Gaps = 32/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 94  IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 153

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA   G     +IVILNDN ++S+         PPVG++S+ L
Sbjct: 154 VIGDGSISAGMAYEAMNNAAVAGEGAERLIVILNDN-EMSI--------APPVGSMSNYL 204

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LR++A    K++   +   A K +EYARGMI+G   TLFEELG YY+GP
Sbjct: 205 SRLMSSRQFMGLRDLAGKFVKKLPNRLERTAKKAEEYARGMITGG--TLFEELGFYYVGP 262

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH++  LV IL  +++T   GP+L+HV+TEKG GY  AE A DKYH VAKF+  TG+Q
Sbjct: 263 VDGHDMTQLVPILRNLRDTDQ-GPILLHVITEKGHGYKPAEAAGDKYHAVAKFNVVTGEQ 321

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+     S+T  FA  LI  A  D  + AI AAM  GTGL+ F  +FP R FDVGIAEQ
Sbjct: 322 KKAPPGPPSWTNIFARELIDRASTDNRIAAITAAMPSGTGLDKFATKFPDRFFDVGIAEQ 381

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 382 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 441

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            GSFD+ ++ CLP M +MAPSDE EL +M ATA   D+ P   RYPRGN  G+ELP   K
Sbjct: 442 AGSFDIAYLGCLPGMTIMAPSDEIELLNMTATACEFDEGPIALRYPRGNTYGLELPA--K 499

Query: 412 GIPLEVGKGRILIE-GER-------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  +++GKGRI+ E G++       +A+L  G  +Q  L A+  L ++GL  TVADARF 
Sbjct: 500 GEIIQIGKGRIVREMGQQSGREKGGIAILSLGPRLQEVLKAADQLAAHGLPPTVADARFA 559

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KPLD  L+  LA+ H VLIT+EEGS+GGFGS V Q L++ GLLD  V+ R + LPD +ID
Sbjct: 560 KPLDTQLVEQLARDHAVLITIEEGSVGGFGSFVAQHLSKTGLLD-NVRLRTMTLPDMFID 618

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H S  +Q   A L   +I  T  N LG
Sbjct: 619 HDSQFEQYNVAHLNAPYIVKTALNALG 645


>gi|397623997|gb|EJK67229.1| hypothetical protein THAOC_11764 [Thalassiosira oceanica]
          Length = 752

 Score =  583 bits (1502), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 307/606 (50%), Positives = 403/606 (66%), Gaps = 52/606 (8%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-KGRKNNVVAVIGDGAM 61
           T+RQ DG+SGF KR ESEYD FG GHSSTSISA  GM+V + L + R+NN +AVIGDGA+
Sbjct: 143 TLRQLDGMSGFCKRKESEYDSFGAGHSSTSISAAQGMSVAKSLLQKRRNNCIAVIGDGAI 202

Query: 62  TAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLD-GPIPPVGALSSALSRLQSNRPL 120
           T G AYEAMN+AGYL S MIV+LNDN QVSLPT T   G + P   LS+  S L  ++P 
Sbjct: 203 TGGMAYEAMNSAGYLTSRMIVVLNDNGQVSLPTGTQSAGGVKPASQLSAYTSNLLVSKPF 262

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           ++ R+ AK + K     + ++  ++DEYARG+++G   TLFEELG +Y+GP+DGH+++++
Sbjct: 263 QDFRDFAKSLNKLFPENVQDVNKRIDEYARGVVTGG--TLFEELGFFYVGPIDGHDLENM 320

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V ILE+++++ +  PVL+H+ T KG GY  A KA+D+ HGV KFD  TG QFK  A   S
Sbjct: 321 VPILEKLRDSDSNKPVLLHLKTTKGYGYEPALKASDRMHGVGKFDIKTGIQFKGKAAAPS 380

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T+ FA ALI  A   +++V I AAM GGTG+++F RRFP R FDVGIAEQHAVTFAAG+
Sbjct: 381 FTSIFANALIDAATEHREIVGITAAMPGGTGMDIFGRRFPKRTFDVGIAEQHAVTFAAGM 440

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFC IYS+FMQR YDQVVHDV +Q LPVR  +DRAG+VG DGPTH G +D+ +M
Sbjct: 441 ACEGLKPFCCIYSTFMQRGYDQVVHDVAIQNLPVRMILDRAGVVGNDGPTHHGCYDLAYM 500

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNG---------IGVELPPG-- 409
            C+PN+ +M+PSDE EL +MVATAA  D+ P   RYPRG G          G +L  G  
Sbjct: 501 GCIPNLTIMSPSDEIELRNMVATAADFDEGPIVLRYPRGVGYAADKLQTLFGYDLQDGEV 560

Query: 410 -NKGIPLEVGKGRILIE----------------------------GE----RVALLGYGT 436
             KG+ +E+GKGRI+ E                            GE    RVA+L  G+
Sbjct: 561 PTKGVAIEIGKGRIIREPGGIRTLSKPEAVPANGSTDSTIGAGSRGETRESRVAILSIGS 620

Query: 437 AVQSCLAASALLESN--GLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGS 494
            +   L A+  LE +   L +TVADARF KPLD  L+ SLA  + V++TVEEGS+GGFG 
Sbjct: 621 RLSEALIAADELEESYPNLAVTVADARFMKPLDKDLVLSLAADNGVIVTVEEGSVGGFGD 680

Query: 495 HVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 553
           HV+ FL+ +G LD G +++RP+V+PD Y +  +  +Q   AGL   HI   V   L +T 
Sbjct: 681 HVLHFLSHEGALDSGDLRFRPMVMPDTYFETATQYEQYEMAGLNARHIRDQVAK-LAKTS 739

Query: 554 EALEIM 559
              E++
Sbjct: 740 AGAEVV 745


>gi|21328654|gb|AAM48660.1| deoxyxylulose-5-phosphate synthase [uncultured marine
           proteobacterium]
          Length = 630

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 304/549 (55%), Positives = 376/549 (68%), Gaps = 14/549 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKRSES YD FG  HSSTSISA  G  V RDL     + +AVIGDG+
Sbjct: 89  MGTLRQEGGLSGFTKRSESPYDPFGAAHSSTSISAAHGFTVARDLGQDTGDAIAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG     M VILNDN ++S+         PPVGA+S  +S L +   L
Sbjct: 149 ISAGMAYEALNNAGAEGRRMFVILNDN-EMSIA--------PPVGAMSKYMSGL-AGTAL 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            +L    + +   + GPM + A +  E   G ++  G T+FEELG  YIGP+DGH++  L
Sbjct: 199 AQLNAFGQDIETVLPGPMRDHARRARELVTGAVASQG-TIFEELGFEYIGPIDGHDMSQL 257

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L   + T+  GPVLIH  T KG+GY  AE +ADKYHGVAKFD A+G Q KS A   S
Sbjct: 258 LSVLRSAR-TRAKGPVLIHCCTVKGKGYAPAETSADKYHGVAKFDVASGAQMKSGANAPS 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTT F + L   AE D  +V I AAM  GTGL++F +RF  R FDVGIAEQH VTFAAGL
Sbjct: 317 YTTVFGQTLTKLAEKDSKIVGITAAMPSGTGLDIFAQRFADRMFDVGIAEQHGVTFAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ F+
Sbjct: 377 AASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDIGFL 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMA +DEAEL HM+ TAAA D  P  FRYPRG G GV +P   +G  L++GKG
Sbjct: 437 TALPNMVVMAAADEAELVHMITTAAAHDTGPIAFRYPRGTGTGVSIP--QEGELLQIGKG 494

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+  G  +ALL +G  +   L A+ L+ + G+  TVADARF KPLDHALI  LAK+H+V
Sbjct: 495 RIVRPGAEIALLSFGGHLAEALKAADLISAQGVDATVADARFAKPLDHALISKLAKTHKV 554

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+E+G+ GGFG+ V+ +LA  GLLDG +  R + LPDR+ID  +P    A AGLT + 
Sbjct: 555 LITIEQGAQGGFGAMVLHYLADTGLLDGPLAVRSMTLPDRFIDQAAPDAMYADAGLTATD 614

Query: 541 IAATVFNIL 549
           IAAT    L
Sbjct: 615 IAATALQAL 623


>gi|86136863|ref|ZP_01055441.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
 gi|85826187|gb|EAQ46384.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter sp. MED193]
          Length = 642

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 305/554 (55%), Positives = 377/554 (68%), Gaps = 18/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRK----NNVVAVI 56
           + T+R   GLSGFTKRSES YD FG  HSSTSISA LG +V RDL G         +AVI
Sbjct: 94  IRTLRTKGGLSGFTKRSESPYDPFGAAHSSTSISAALGFSVARDLGGVVPEGLGEAIAVI 153

Query: 57  GDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           GDG+M+AG A+EAMNNAG+L   MIVILNDN ++S+         PPVGALSS LSRL +
Sbjct: 154 GDGSMSAGMAFEAMNNAGHLKKRMIVILNDN-EMSI--------APPVGALSSYLSRLYA 204

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             P +EL+ VAKG    +  P  E A +  +  +GM    G T+FE  G  Y+GP+DGH+
Sbjct: 205 EEPFQELKAVAKGAASLLPEPFREGAKRAKDMLKGM--AVGGTMFESFGFSYLGPIDGHD 262

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+ +L  VK  + TGPVLIHV+T+KG+GY  AE A DK H  AKFD  TGKQ K+ +
Sbjct: 263 MDQLLPVLRTVK-ARATGPVLIHVLTKKGKGYGPAEAARDKGHATAKFDVVTGKQHKTPS 321

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT  F + L+  A  D  + A+ AAM  GTGL+L   R+P+RCFDVGIAEQH VTF
Sbjct: 322 NAPSYTGVFGDELVKLAAKDDKICAVTAAMPDGTGLSLMAERYPSRCFDVGIAEQHGVTF 381

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AA LA  G+KPFCA+YS+F+QR YDQVVHDV +Q+LPVRFA+DRAGLVGADG TH GSFD
Sbjct: 382 AAALAAGGMKPFCAMYSTFLQRGYDQVVHDVAIQRLPVRFAIDRAGLVGADGATHAGSFD 441

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + +MA LP MVVMA +DEAEL HMV TAAA D  P  FRYPRG G GVE+P   +   LE
Sbjct: 442 IGYMANLPGMVVMAAADEAELVHMVHTAAAHDAGPIAFRYPRGEGEGVEMP--EEPQLLE 499

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKGR++ EG RVALL +GT +     A+  L + G+  T+ADARF KPLD  +I  L  
Sbjct: 500 IGKGRMIQEGSRVALLSFGTRLGEVKKAAEALAAKGITPTIADARFAKPLDREMILDLVA 559

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            HE LI++EEG++GGFGSHV Q L+ +G+ D   K+R +VLPD +ID  SPAD    A +
Sbjct: 560 GHEALISIEEGAVGGFGSHVAQLLSDEGVFDRGFKFRSMVLPDIFIDQSSPADMYETAAM 619

Query: 537 TPSHIAATVFNILG 550
               I A V  +LG
Sbjct: 620 NAPQIEAKVLEVLG 633


>gi|149202070|ref|ZP_01879043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
 gi|149144168|gb|EDM32199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. TM1035]
          Length = 661

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 303/545 (55%), Positives = 380/545 (69%), Gaps = 14/545 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AVGRD+     + +AVIGDG+
Sbjct: 114 IRTLRQKDGLSGFTKRSESIYDPFGAAHSSTSISAALGFAVGRDMGQATGDAIAVIGDGS 173

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG     + VILNDN ++S+         PPVGA+SS LSR+ ++ PL
Sbjct: 174 ISAGMAYEALNNAGAEGRRLFVILNDN-EMSI--------APPVGAMSSYLSRMYASEPL 224

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +  +A+G    +  P+ E A +  +   G+ +GSG TLFEELG  Y+GP+DGH++  L
Sbjct: 225 ARMASLAEGFEAALPTPLRESAKRARQLVTGL-TGSG-TLFEELGFQYVGPIDGHDMGQL 282

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L   + T+ TGPVLIHV T KG+GY  AE AADK HGV+KFDPATG Q KS     S
Sbjct: 283 LSVLRAAR-TRATGPVLIHVCTVKGKGYAPAEGAADKGHGVSKFDPATGAQAKSKPGAPS 341

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F +AL+ EA  D  +VA+ AAM  GTGL     RFP R FDVGIAEQHAVTFAAG+
Sbjct: 342 YTGVFGQALVDEAARDDRIVAVTAAMPDGTGLTKMAERFPARVFDVGIAEQHAVTFAAGM 401

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFC IYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 402 AASGLKPFCTIYSTFLQRAYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIGYL 461

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP M +MA +DEAEL HMVATAAA D  P  FRYPRG+G GV LP   +G PL +GKG
Sbjct: 462 GNLPGMTLMAAADEAELVHMVATAAAHDAGPIAFRYPRGSGTGVALP--ERGKPLAIGKG 519

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +G  +  C  A+ ++  +G+ +TVADARF KPLD  L+  L   H  
Sbjct: 520 RVIEEGTDVAILSFGAHLFECQVAADMVADDGITVTVADARFAKPLDTDLLMQLVGHHRA 579

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVE+G++GGFGS V+  LA+ G  D  +  R L LPDR+ID   PAD  A AGL+ + 
Sbjct: 580 LITVEQGAMGGFGSMVLHELARRGAFDKGLILRTLCLPDRFIDQADPADMYADAGLSATD 639

Query: 541 IAATV 545
           IA ++
Sbjct: 640 IAHSI 644


>gi|229597237|ref|YP_001756119.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 656

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 316/568 (55%), Positives = 395/568 (69%), Gaps = 26/568 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG---RKN 50
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL       KG   ++ 
Sbjct: 95  IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGAQKRR 154

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           N +AVIGDG+M+AG AYEA+NNAG L S +IVILNDN  +S+         PPVGA+S+ 
Sbjct: 155 NAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSAY 205

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    + LRE AK + K +   +++ AA  +EYAR ++ G G T+FEE+G +Y+G
Sbjct: 206 LARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGG-TMFEEMGFHYVG 264

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           PVDGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G 
Sbjct: 265 PVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 323

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDVGIAE
Sbjct: 324 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 383

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG T
Sbjct: 384 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 443

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVELP   
Sbjct: 444 HAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRGEGVGVELP--E 501

Query: 411 KGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           +G  L +GKGR++      RVALL  GT +   L A+  L   G+ +TVADARF KPLD 
Sbjct: 502 RGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVADARFAKPLDE 561

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
           ALI  LA+ HEVLITVEEGS GGFG+ V+  LA+ G LD G V+ R + LPD Y DH SP
Sbjct: 562 ALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTLPDAYQDHDSP 621

Query: 528 ADQLAQAGLTPSHIAATVFNILGQTREA 555
               A+AGL    I  T  + L + +++
Sbjct: 622 EKMYAEAGLDAKTIVRTALDTLPERKDS 649


>gi|393719494|ref|ZP_10339421.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas echinoides
           ATCC 14820]
          Length = 641

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 308/551 (55%), Positives = 376/551 (68%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSESEYD FG  HSSTSISA LG AV   + G+    +AVIGDGA
Sbjct: 94  IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISASLGFAVANKIAGKPGKGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ LSR+ S+R  
Sbjct: 154 MSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLSRIVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R++A+ + K++  P+     K +E+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGFRDLARKLAKRLPKPIATGMRKTEEFARGM--AMGGTLFEELGFYYVGPIDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ +  GP+L+HVVT+KG+GY  AE AADKYHGV KFD  TG Q K+      
Sbjct: 263 IPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVITGAQAKAPPGPPQ 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F   L  EAE D  + AI AAM  GTGL+ F +  P R FDVGIAEQHAVTFAAGL
Sbjct: 322 YQNVFGAQLSKEAETDPLICAITAAMPSGTGLDGFSKAHPERFFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFDVT+M
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDVTYM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPNMVVMAP+DEAEL HM  TA   D  P   RYPRGNG GV LP     +P  LE+G
Sbjct: 442 ASLPNMVVMAPADEAELVHMTHTAVLHDSGPIALRYPRGNGTGVALPE----VPQQLEIG 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRI+ +G +VA+L  GT +   L A+  LE+ GL  TVAD RF KPLD  LIR L  +H
Sbjct: 498 KGRIVRQGHKVAILSLGTRLGEALRAAEALEAKGLSTTVADLRFAKPLDEELIRKLLTTH 557

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EV +T+EE S+GG G+HV+ F +  GL+D  +K R + LPD + D   P  Q AQAGL  
Sbjct: 558 EVAVTIEEASVGGLGAHVLTFASDAGLIDAGLKLRTMRLPDLFQDQDKPEVQYAQAGLDA 617

Query: 539 SHIAATVFNIL 549
             I  TV   L
Sbjct: 618 DAIVETVLKAL 628


>gi|393769991|ref|ZP_10358504.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           sp. GXF4]
 gi|392724572|gb|EIZ81924.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           sp. GXF4]
          Length = 628

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 316/557 (56%), Positives = 390/557 (70%), Gaps = 26/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KGR---KN 50
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL       KGR   + 
Sbjct: 84  IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDADAAKAKGRGVKRR 143

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           N +AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S  
Sbjct: 144 NAIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSGY 194

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    + LRE AK + K +   +++ AA  +EYAR ++ G G T+FEE+G +Y+G
Sbjct: 195 LARLASGGTYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGG-TMFEEMGFHYVG 253

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           PVDGHN+D L+ +L+ V++ +  GP+L+HVVT KG+GY  AE +AD+YHGV KFD  +G 
Sbjct: 254 PVDGHNLDQLLPVLKNVRDAEH-GPILLHVVTRKGKGYAPAEASADRYHGVVKFDVVSGV 312

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDVGIAE
Sbjct: 313 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 372

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG T
Sbjct: 373 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 432

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVELP   
Sbjct: 433 HAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDSGPIALRYPRGEGVGVELP--E 490

Query: 411 KGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           +G  L +GKGR++ +    RVA+L  GT +   L A+  L   G+ +TVADARF KPLD 
Sbjct: 491 RGEALAIGKGRMVRQDAEARVAILSLGTRLSEALKAADTLSDQGVAVTVADARFAKPLDE 550

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
           ALI  LA+SHEVLIT+EEGS GGFG+ V+  L++ G LD G V+ R L LPD Y DH SP
Sbjct: 551 ALILDLAQSHEVLITIEEGSRGGFGAMVLHLLSERGALDAGRVRVRTLTLPDLYQDHDSP 610

Query: 528 ADQLAQAGLTPSHIAAT 544
               A+AGL  + I  T
Sbjct: 611 EKMYAEAGLDAATIVKT 627


>gi|47717729|gb|AAT37907.1| chloroplast 1-deoxy-D-xylulose-5-phosphate synthase [Elaeis
           guineensis]
          Length = 313

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/294 (95%), Positives = 288/294 (97%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT+GLSGFTKRSESEYDCFGTGHSST+ISAGLGMAVGRDLKGRKNNVVAVIGDGA
Sbjct: 20  MHTIRQTNGLSGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRKNNVVAVIGDGA 79

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL
Sbjct: 80  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 139

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTK+IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP DGHN+DDL
Sbjct: 140 RELREVAKGVTKRIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPGDGHNIDDL 199

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL+E K TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFK SA TQS
Sbjct: 200 IAILKEGKGTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKGSAITQS 259

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           YTTYFAEALIAEAEVDKD+VAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV
Sbjct: 260 YTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 313


>gi|170656381|gb|ACB25436.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
           JCM 2831]
          Length = 626

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 316/568 (55%), Positives = 395/568 (69%), Gaps = 26/568 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG---RKN 50
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL       KG   ++ 
Sbjct: 65  IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGAQKRR 124

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           N +AVIGDG+M+AG AYEA+NNAG L S +IVILNDN  +S+         PPVGA+S+ 
Sbjct: 125 NAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSAY 175

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    + LRE AK + K +   +++ AA  +EYAR ++ G G T+FEE+G +Y+G
Sbjct: 176 LARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGG-TMFEEMGFHYVG 234

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           PVDGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G 
Sbjct: 235 PVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 293

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDVGIAE
Sbjct: 294 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 353

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG T
Sbjct: 354 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 413

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVELP   
Sbjct: 414 HAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRGEGVGVELP--E 471

Query: 411 KGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           +G  L +GKGR++      RVALL  GT +   L A+  L   G+ +TVADARF KPLD 
Sbjct: 472 RGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVADARFAKPLDE 531

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
           ALI  LA+ HEVLITVEEGS GGFG+ V+  LA+ G LD G V+ R + LPD Y DH SP
Sbjct: 532 ALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTLPDAYQDHDSP 591

Query: 528 ADQLAQAGLTPSHIAATVFNILGQTREA 555
               A+AGL    I  T  + L + +++
Sbjct: 592 EKMYAEAGLDAKTIVRTALDTLPERKDS 619


>gi|410687145|ref|YP_006965280.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
           guttiformis]
 gi|399920087|gb|AFP55491.1| 1-deoxy-D-xylulose-5-phosphate synthase 1 [Sulfitobacter
           guttiformis]
          Length = 630

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 305/541 (56%), Positives = 368/541 (68%), Gaps = 22/541 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  GLSGFTKRSESE+D FG  HSSTSISA LG  V RD+     + +AVIGDG+
Sbjct: 92  MHTLRQEGGLSGFTKRSESEFDPFGAAHSSTSISAALGFTVARDMGEATGDAIAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG +   M VILNDN ++S+         PPVGA+S         R +
Sbjct: 152 ISAGMAYEAMNNAGAMGRRMFVILNDN-EMSIA--------PPVGAMS---------RYM 193

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             L E A G    + GP+ + A +  +   G +    STLFE LG  YIGP+DGH++  L
Sbjct: 194 SGLTEFANGTLAALPGPLRDHARRARQLVTGAVE-EQSTLFENLGFQYIGPIDGHDMGQL 252

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L   + T+ TGPVLIH  T KG+GY  AE A+D YHGV KFDP TG Q KS     S
Sbjct: 253 LGVLRAAR-TRATGPVLIHCCTVKGKGYAPAEAASDSYHGVGKFDPVTGIQAKSKPNAPS 311

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F +AL  EA  D  +VAI AAM GGTGL++F +  P R FDVGIAEQH VTFAAG+
Sbjct: 312 YTEIFGKALTEEARRDPKIVAITAAMPGGTGLDIFAKTHPNRMFDVGIAEQHGVTFAAGV 371

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPF AIYSSF+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 372 AAGGLKPFVAIYSSFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDIGYL 431

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNMVVMA SDEAEL HMVATAAA DD P  FRYPRG G GV LP   +G+PLE+GKG
Sbjct: 432 VALPNMVVMAASDEAELVHMVATAAAYDDGPIAFRYPRGEGEGVTLP--ERGVPLEIGKG 489

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I+ +G  VA+L +G  +     A+ L+E+ GL +TVADARF KPLD ALI  LA+ H V
Sbjct: 490 VIVRQGFDVAILSFGAHLGESQRAADLIEAQGLTVTVADARFAKPLDKALINQLARKHRV 549

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVE+GS GGFGS V+  LA +G LD T+  R + LPDR+ID  +P    A AG+T   
Sbjct: 550 LITVEQGSRGGFGSMVLDHLANEGWLDKTLAVRTVNLPDRFIDQAAPDAMYADAGMTAGD 609

Query: 541 I 541
           I
Sbjct: 610 I 610


>gi|170656911|gb|ACB25966.1| deoxyxylulose-5-phosphate synthase [Methylobacterium radiotolerans
           JCM 2831]
          Length = 634

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 316/562 (56%), Positives = 390/562 (69%), Gaps = 26/562 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG---RKN 50
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL       KG   ++ 
Sbjct: 65  IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGAQKRR 124

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           N +AVIGDG+M+AG AYEA+NNAG L S +IVILNDN  +S+         PPVGA+S+ 
Sbjct: 125 NAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSAY 175

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    + LRE AK + K +   +++ AA  +EYAR ++ G G T+FEE+G +Y+G
Sbjct: 176 LARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGG-TMFEEMGFHYVG 234

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           PVDGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G 
Sbjct: 235 PVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 293

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDVGIAE
Sbjct: 294 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 353

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG T
Sbjct: 354 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 413

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVELP   
Sbjct: 414 HAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRGEGVGVELP--E 471

Query: 411 KGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           +G  L +GKGR++      RVALL  GT +   L A+  L   G+ +TVADARF KPLD 
Sbjct: 472 RGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVADARFAKPLDE 531

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
           ALI  LA+ HEVLITVEEGS GGFG+ V+  LA+ G LD G V+ R + LPD Y DH SP
Sbjct: 532 ALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTLPDAYQDHDSP 591

Query: 528 ADQLAQAGLTPSHIAATVFNIL 549
               A+AGL    I  T    L
Sbjct: 592 EKMYAEAGLDAKTIVRTALATL 613


>gi|229597238|ref|YP_001756649.2| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 664

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 316/562 (56%), Positives = 390/562 (69%), Gaps = 26/562 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG---RKN 50
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LGMAV RDL       KG   ++ 
Sbjct: 95  IRTLRQGGGLSGFTKRSESVYDPFGAAHSSTSISAALGMAVARDLDNATAKQKGGAQKRR 154

Query: 51  NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSA 110
           N +AVIGDG+M+AG AYEA+NNAG L S +IVILNDN  +S+         PPVGA+S+ 
Sbjct: 155 NAIAVIGDGSMSAGMAYEALNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSAY 205

Query: 111 LSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIG 170
           L+RL S    + LRE AK + K +   +++ AA  +EYAR ++ G G T+FEE+G +Y+G
Sbjct: 206 LARLASGGAYQSLRETAKQLGKLLPKALYQRAAAAEEYARSLVVGGG-TMFEEMGFHYVG 264

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           PVDGHN+D L+ +L+ V++ +  GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G 
Sbjct: 265 PVDGHNLDHLLPVLKNVRDAEH-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSGI 323

Query: 231 QFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAE 290
           Q K+     +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P + FDVGIAE
Sbjct: 324 QAKAKPNAPAYTRVFGESLIKAADADDKVVAITAAMPGGTGIDLFGKAHPDKTFDVGIAE 383

Query: 291 QHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPT 350
           QHAVTFA GLA EG +PF AIYS+F+QRAYDQVVHDV LQ LPVRF +DRAGLVGADG T
Sbjct: 384 QHAVTFAGGLATEGYRPFVAIYSTFLQRAYDQVVHDVALQNLPVRFCLDRAGLVGADGAT 443

Query: 351 HCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGN 410
           H G+FD+ ++ CLPNM VMA +DEAEL HMVATA A D  P   RYPRG G+GVELP   
Sbjct: 444 HAGAFDLAYLCCLPNMTVMAAADEAELVHMVATAHAHDTGPIALRYPRGEGVGVELP--E 501

Query: 411 KGIPLEVGKGRILIEG--ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           +G  L +GKGR++      RVALL  GT +   L A+  L   G+ +TVADARF KPLD 
Sbjct: 502 RGEVLAIGKGRVVRRDAEARVALLSLGTRLAEALKAADALAEQGVAVTVADARFAKPLDE 561

Query: 469 ALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLD-GTVKWRPLVLPDRYIDHGSP 527
           ALI  LA+ HEVLITVEEGS GGFG+ V+  LA+ G LD G V+ R + LPD Y DH SP
Sbjct: 562 ALILDLARDHEVLITVEEGSRGGFGAMVLHLLAERGALDAGGVRVRTMTLPDAYQDHDSP 621

Query: 528 ADQLAQAGLTPSHIAATVFNIL 549
               A+AGL    I  T    L
Sbjct: 622 EKMYAEAGLDAKTIVRTALATL 643


>gi|354593293|ref|ZP_09011338.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
           A911]
 gi|353673358|gb|EHD15052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Commensalibacter intestini
           A911]
          Length = 672

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 297/567 (52%), Positives = 394/567 (69%), Gaps = 31/567 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN------NVVA 54
           + T+RQ  GLSGFTKRSES YD FG  HSSTSISA LG+AV    K + +      N +A
Sbjct: 119 IRTLRQPGGLSGFTKRSESIYDPFGAAHSSTSISAALGIAVANHYKAKHDPSYKERNSIA 178

Query: 55  VIGDGAMTAGQAYEAMNNA---GYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG++TAG AYEAMNNA   G     +IVILNDN ++S+          PVG++S  L
Sbjct: 179 VIGDGSITAGMAYEAMNNAAVAGPGAEKLIVILNDN-EMSISQ--------PVGSMSVYL 229

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           S+L S+R    LR++A  V K++   + + A + +EYAR M++G   TLFEELG YY+GP
Sbjct: 230 SQLLSSRHFLGLRDLAARVAKKLPESIEKKAKRAEEYARSMMTGG--TLFEELGFYYVGP 287

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           +DGHN+  LV +L  +++    GP+L+H+VT+KG GY  AE + DKYH V+KF+  TG+Q
Sbjct: 288 IDGHNLQQLVPVLRNLRDADQIGPILLHIVTQKGHGYKPAESSGDKYHAVSKFNVITGEQ 347

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K+     SYT+ F++ L+  A+ D+ ++AI AAM  GTGL+ F   FP R FDVGIAEQ
Sbjct: 348 TKAPPGPPSYTSVFSKELLKRAKEDEKIIAITAAMPSGTGLDKFQETFPDRYFDVGIAEQ 407

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAGLA EG++PFCAIYSSF+QR YDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 408 HAVTFAAGLATEGMRPFCAIYSSFLQRGYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 467

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G++D+ ++ CLP++V+MAPSDE EL HM ATAAA D+ P  FR+PRG G+G++LP  N+
Sbjct: 468 AGTYDIAYLGCLPDIVLMAPSDEVELMHMTATAAAFDEGPIAFRFPRGPGLGLQLP--NQ 525

Query: 412 GIPLEVGKGRILIE-GER-------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
              LE+GKGRI+ E G +       +A+L +G  +  CL A+  L   G   T+ DARF 
Sbjct: 526 AEILEIGKGRIVQEMGNQTGKEKGGIAILSFGARLTECLKAAETLTEQGYSPTIIDARFA 585

Query: 464 KPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYID 523
           KPLD  LI  LA++H+VLIT+EEGS GGFG++V++ LA +GLLD  V++RP+V+PD +I 
Sbjct: 586 KPLDTDLINQLARNHKVLITIEEGSRGGFGAYVMEHLANNGLLD-NVRFRPMVIPDFFIH 644

Query: 524 HGSPADQLAQAGLTPSHIAATVFNILG 550
           H + A Q  +AGL  + I       +G
Sbjct: 645 HNTQAAQYTEAGLDSASIVKVALKAMG 671


>gi|85703516|ref|ZP_01034620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
 gi|85672444|gb|EAQ27301.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseovarius sp. 217]
          Length = 661

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 300/542 (55%), Positives = 374/542 (69%), Gaps = 14/542 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSES YD FG  HSSTSISA LG AV RD+     + +AVIGDG+
Sbjct: 114 IRTLRQKDGLSGFTKRSESIYDPFGAAHSSTSISAALGFAVARDMGQATGDAIAVIGDGS 173

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG     + VILNDN ++S+         PPVGA+SS LSR+ ++ PL
Sbjct: 174 ISAGMAYEALNNAGAEGRRLFVILNDN-EMSI--------APPVGAMSSYLSRMYASEPL 224

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +  +A+G    +  P+ E A +  +   G+ +GSG TLFEELG  Y+GP+DGH++  L
Sbjct: 225 ARMASLAEGFEAALPAPLRESAKRARQLVTGL-TGSG-TLFEELGFQYVGPIDGHDMGQL 282

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L   + T+ TGPVLIH  T KG+GY  AE AAD+ HGV+KFDPATG Q KS     S
Sbjct: 283 LSVLRAAR-TRATGPVLIHCCTVKGKGYAPAEGAADRGHGVSKFDPATGAQAKSKPGAPS 341

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F +AL  EA  D  +VA+ AAM  GTGL     RFP R FDVGIAEQHAVTFAAG+
Sbjct: 342 YTGVFGQALTDEAARDDRIVAVTAAMPDGTGLTKMAERFPARVFDVGIAEQHAVTFAAGM 401

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYS+F+QRAYDQVVHDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 402 AASGLKPFCAIYSTFLQRAYDQVVHDVALQGLPVRFAIDRAGLVGADGATHAGAFDIGYL 461

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP M +MA +DEAEL HMVATAAA D  P  FRYPRG+G GV LP   +G PL +GKG
Sbjct: 462 GNLPGMTLMAAADEAELVHMVATAAAHDAGPIAFRYPRGSGTGVALP--ERGKPLAIGKG 519

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG  VA+L +G  +  C  A+ ++  +G+ +TVADARF KPLD  L+  L   H  
Sbjct: 520 RIIEEGTDVAILSFGAHLFECQVAADMVADDGISVTVADARFAKPLDTDLLMQLVSHHRA 579

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVE+G++GGFGS V+  LA+ G  D  +  R L LPDR+ID  +P D    AGL+   
Sbjct: 580 LITVEQGAMGGFGSMVMHELARRGAFDKGLILRTLCLPDRFIDQANPEDMYVDAGLSAPQ 639

Query: 541 IA 542
           IA
Sbjct: 640 IA 641


>gi|255261415|ref|ZP_05340757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
 gi|255103750|gb|EET46424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thalassiobium sp. R2A62]
          Length = 619

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 299/553 (54%), Positives = 380/553 (68%), Gaps = 25/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGFTKR+ES++D FG  HSSTSISA LG  V RD+     + VA+IGDG+
Sbjct: 89  MKTLRQEGGISGFTKRTESDFDPFGAAHSSTSISAALGFTVARDMGQPTGDAVAIIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG     M VILNDN ++S+         PPVGA+S  +SRL ++ PL
Sbjct: 149 ISAGMAYEAMNNAGAEGRRMFVILNDN-EMSIA--------PPVGAMSQYMSRL-ADTPL 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                        + GP+ + A +  E   G  + SG T+FEELG  Y+GP++GH++D L
Sbjct: 199 ----------GAALPGPLRDHARRARELVTGRTTSSG-TMFEELGFEYVGPINGHDMDQL 247

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A+L  V+ T+ TGPVLIH  T KG+GY  AE +ADKYHGV+KFD ++G Q KS +   S
Sbjct: 248 LAVLRSVR-TRATGPVLIHCCTVKGKGYAPAENSADKYHGVSKFDVSSGAQAKSGSNAPS 306

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F  AL   A  D  +V I AAM  GTG+++F   FP R FDVGIAEQH VTFAAGL
Sbjct: 307 YTSVFGHALTRIAARDSKIVGITAAMPSGTGMDIFADAFPRRVFDVGIAEQHGVTFAAGL 366

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FDV ++
Sbjct: 367 AAGGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDVGYL 426

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPNM VMA SDEAEL HMVATA A D  P  FRYPRG G G  +P  + G  LE+GKG
Sbjct: 427 SALPNMTVMAASDEAELVHMVATAVAHDAGPIAFRYPRGTGTGAAVP--DLGEVLEIGKG 484

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  VA+L +G  +   L ++ ++ + G+  TVADARF KPLDHALIR L K H+ 
Sbjct: 485 RVVREGADVAILSFGAHLSESLKSADMMAAQGVTATVADARFAKPLDHALIRQLVKHHKA 544

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LIT+E+GS GGFG+ V+ ++A +GLLDG +  R + LPDR+ID  +P    A AGLT + 
Sbjct: 545 LITIEQGSQGGFGAMVLHYMAGEGLLDGDIAVRTMTLPDRFIDQAAPDAMYADAGLTATD 604

Query: 541 IAATVFNILGQTR 553
           IAAT    + +TR
Sbjct: 605 IAATAIQAV-KTR 616


>gi|393723890|ref|ZP_10343817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sphingomonas sp. PAMC
           26605]
          Length = 641

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 303/551 (54%), Positives = 377/551 (68%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+R   GLSGFTKRSESEYD FG  HSSTSISA LG  V   +  +    +AVIGDGA
Sbjct: 94  IRTLRMGGGLSGFTKRSESEYDPFGAAHSSTSISAALGFGVANKIADKPGKGIAVIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA    + ++VILNDN  +S+         PPVG LS+ LSR+ S+R  
Sbjct: 154 MSAGMAYEAMNNAAQAGNRLVVILNDN-DMSIA--------PPVGGLSAYLSRIVSSREF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R++A+ + K++  P+ +   K +E+ARGM    G TLFEELG YY+GP+DGHN+D L
Sbjct: 205 LGFRDLARKLAKRLPKPIADGMRKTEEFARGM--AMGGTLFEELGFYYVGPIDGHNLDQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +LE V++ +  GP+L+HVVT+KG+GY  AE AADKYHGV KFD  +G Q K+      
Sbjct: 263 IPVLENVRDAEE-GPILVHVVTKKGKGYAPAEAAADKYHGVQKFDVISGVQTKAPPGPPQ 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y   F   L  EAE D  + AI AAM  GTGL+ F +  P R FDVGIAEQHAVTFAAGL
Sbjct: 322 YQNVFGAQLSKEAETDPRICAITAAMPSGTGLDAFAKAHPERFFDVGIAEQHAVTFAAGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A +G++PFCAIYS+F+QRAYDQVVHDV +Q LPVRFA+DRAGLVGADG TH GSFD+ ++
Sbjct: 382 AAQGMRPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRAGLVGADGATHAGSFDLAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVG 418
           A LPNMVVMAP+DEAEL HM  TA   D  P   RYPRGNG GVELP     +P  LE+G
Sbjct: 442 ATLPNMVVMAPADEAELVHMTHTAILHDSGPIAVRYPRGNGTGVELPV----VPEALEIG 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGRI+ +G +VA+L  GT ++  L A+  LE+ GL  TVAD RF KPLD  LIR L  +H
Sbjct: 498 KGRIVRQGHKVAILSLGTRLEEALRAAEALEAKGLSTTVADLRFAKPLDEDLIRKLLTTH 557

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           EV +T+EEG++GG G+HV+ F +  GL+D  +K R + LPD + D   P  Q AQAGL  
Sbjct: 558 EVAVTIEEGAVGGLGAHVLTFASDSGLIDAGLKLRTMRLPDIFQDQDKPELQYAQAGLDA 617

Query: 539 SHIAATVFNIL 549
             I  TV   L
Sbjct: 618 DAIVETVLKAL 628


>gi|89052661|ref|YP_508112.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
 gi|118595486|sp|Q28W25.1|DXS2_JANSC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|88862210|gb|ABD53087.1| 1-deoxy-D-xylulose-5-phosphate synthase [Jannaschia sp. CCS1]
          Length = 636

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 300/552 (54%), Positives = 377/552 (68%), Gaps = 18/552 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGLSGFTKRSESEYD FG  HSSTSISA LG A  +DL     + +AVIGDG+
Sbjct: 93  IRTLRQKDGLSGFTKRSESEYDPFGAAHSSTSISAALGFAAAQDLGEATGDGIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEA+NNAG L   + VILNDN ++S+         PPVGA+S  L+ L +  PL
Sbjct: 153 ISAGMAYEALNNAGDLGKRLFVILNDN-EMSIA--------PPVGAMSKYLTDLSAKSPL 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGS--GSTLFEELGLYYIGPVDGHNVD 178
             L+++A GV   +  P+ + A    E AR +++G    +TLFE LG  YIGPVDGH+++
Sbjct: 204 ATLKDIADGVASHLPEPIRQGA----ERARELVTGHQPSATLFEHLGFTYIGPVDGHDME 259

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +L+  L   K  + TGPVLIH VT KG+GY  AE + D YHGVAKFD ATG+Q KS+   
Sbjct: 260 ELLTTLRAAK-ARATGPVLIHAVTVKGKGYSPAELSDDCYHGVAKFDVATGQQKKSAPNA 318

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT+ F + L+  AE D  +V + AAM GGTG++   +  P R FDVGIAEQHAVTF+A
Sbjct: 319 PSYTSVFGQTLLNMAEADSRIVGVTAAMPGGTGISTLQKAKPNRVFDVGIAEQHAVTFSA 378

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A  GLKPFCAIYSSF+QR YDQ+VHDV LQ LPVRF +DRAGLVGADGPTH G+FD+ 
Sbjct: 379 GMAAGGLKPFCAIYSSFLQRGYDQIVHDVALQSLPVRFMIDRAGLVGADGPTHAGAFDIG 438

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           +++ LPNM VMA +DEAEL HM+ATAAA +D P   RYPRG G GV LP  ++G  LE+G
Sbjct: 439 YLSALPNMTVMACADEAELVHMMATAAAHNDGPIALRYPRGEGTGVALP--DQGDVLEIG 496

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++ +G  VA+L +G  ++    A+  LE+ GL +TVADARF KPLD  LI  L   H
Sbjct: 497 KGRVIQDGHDVAILSFGAHLEEAKDAATALEARGLSVTVADARFAKPLDTTLIDDLMTKH 556

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
             LITVE+G++ GFG  V+  LA  G LDG    R L LPDR+ID  SPA+  A AGLT 
Sbjct: 557 SALITVEQGAVLGFGGLVLHHLAATGQLDGRCAVRTLHLPDRFIDQASPAEMYADAGLTA 616

Query: 539 SHIAATVFNILG 550
             IA      +G
Sbjct: 617 DDIAQAALEAMG 628


>gi|357027710|ref|ZP_09089776.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
           amorphae CCNWGS0123]
 gi|355540411|gb|EHH09621.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Mesorhizobium
           amorphae CCNWGS0123]
          Length = 571

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 293/477 (61%), Positives = 352/477 (73%), Gaps = 14/477 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GLSGFT+R+ESEYD FG  HSSTSISAGLGMA+ RDL G +NNV+AVIGDGA
Sbjct: 109 IRTLRQEGGLSGFTRRAESEYDPFGAAHSSTSISAGLGMAMARDLSGGRNNVIAVIGDGA 168

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG LD+ +IVILNDN  +S+         PP GA+S+ L+RL S R  
Sbjct: 169 MSAGMAYEAMNNAGALDARLIVILNDN-DMSIA--------PPTGAMSAYLARLASGRTY 219

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+  K +T  +G        +  E+ARG ++G   TLFEELG Y+IGP+DGHN++ L
Sbjct: 220 LGLRDFGKKLTSYLGKRADRAITRAVEHARGYVTGG--TLFEELGFYHIGPIDGHNLEHL 277

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L+ V++    GPVLIHVVT+KG+GY  AE AADKYHGV KFD  TG Q K+ A   S
Sbjct: 278 IPVLKNVRDNGD-GPVLIHVVTQKGKGYGPAEAAADKYHGVNKFDVITGAQAKAPANAPS 336

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FAE+L+ E   D  +VA+ AAM  GTGL+LF   FP+R FDVGIAEQHAVTFAAGL
Sbjct: 337 YTKVFAESLVQEGREDDRIVAVTAAMPNGTGLDLFGEAFPSRTFDVGIAEQHAVTFAAGL 396

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG KPF AIYS+F+QRAYDQVVHDV +QKLPVRF +DRAG VGADG THCG+FD TF+
Sbjct: 397 ATEGYKPFAAIYSTFLQRAYDQVVHDVAIQKLPVRFPIDRAGFVGADGATHCGAFDTTFL 456

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP  VVMA +DEAEL HMV TAA  DD P  FRYPRGNG+GVE+P   +G  LE+G+G
Sbjct: 457 ATLPGFVVMAAADEAELRHMVRTAAHYDDGPIAFRYPRGNGVGVEMP--ERGSVLEIGRG 514

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           RI+ EG +VALL +GT +Q CL A+  L + GL  TVADARF KPLD  LIR LA+S
Sbjct: 515 RIVREGTKVALLSFGTRLQDCLLAAEELGAAGLSTTVADARFAKPLDEDLIRRLARS 571


>gi|50952770|gb|AAT90303.1| putative deoxyxylulose-5-phosphate synthase [uncultured
           proteobacterium eBACred25D05]
          Length = 647

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 292/541 (53%), Positives = 374/541 (69%), Gaps = 14/541 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ DG+SGFTKRSESEYD FG  HSSTSISA LG  +GR+L     + +AVIGDG+
Sbjct: 94  MMGLRQKDGVSGFTKRSESEYDPFGAAHSSTSISAALGFTMGRELGQTVGDCIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG AYEAMNNAG  +  + VILNDN ++S+         PPVGA+SS LS L  N   
Sbjct: 154 ISAGMAYEAMNNAGAENKRLFVILNDN-EMSIA--------PPVGAMSSYLSGLYGNSAF 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            +L+ +A+ V   +   M + A +  +   GM     +TLFEELG  Y+GP+DGHN+  L
Sbjct: 205 HKLKTLAEEVEVHLPWAMRDGARRARQIVTGM--HGQATLFEELGFDYLGPIDGHNMPQL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +++L   K  + TGPVLIHV T+KG GY  AE ++DKYHGV+KFD ATG Q K+ A   S
Sbjct: 263 LSVLRAAK-ARATGPVLIHVCTKKGCGYAPAENSSDKYHGVSKFDIATGLQSKTPANAPS 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+ F +AL  EAE D  +VA+ AAM  GTG+N   + FP R FDVGIAEQH VTFAAG+
Sbjct: 322 YTSIFGQALTIEAEADPRIVAVTAAMPSGTGVNAMAKVFPKRVFDVGIAEQHGVTFAAGM 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADG TH G+FDV ++
Sbjct: 382 AASGLKPFCAIYSTFLQRGYDQIVHDVALQNLPVRFAIDRAGLVGADGATHAGAFDVAYL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LPN VVMA +DEAEL HMV TAA  D  P  FRYPRGNG+GVELP   +G  LE+GKG
Sbjct: 442 SNLPNFVVMAAADEAELMHMVRTAAEYDAGPISFRYPRGNGLGVELP--KRGEVLEIGKG 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G  +A+L +G  +     A+  L++ G+ +T+ADARF KPLD  LI  L  +H  
Sbjct: 500 RIIQDGSDIAILSFGAHLSVVQEAAVALKNKGISVTIADARFAKPLDTDLIDELVNNHSA 559

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           ++TVE+GS+GGF S V+ +L Q G L   +    +VLPDR+ID  SPA+  + AG++  H
Sbjct: 560 ILTVEQGSVGGFSSLVLHYLMQSGQLRHGINIDSMVLPDRFIDQASPAEMYSDAGMSEGH 619

Query: 541 I 541
           +
Sbjct: 620 V 620


>gi|329851865|ref|ZP_08266546.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
           C19]
 gi|328839714|gb|EGF89287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Asticcacaulis biprosthecum
           C19]
          Length = 639

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 304/550 (55%), Positives = 379/550 (68%), Gaps = 14/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + ++RQ  GLSGFTKRSES YD FG  H++TSISA LG    RD KG  + V+AVIGDG+
Sbjct: 92  IRSLRQGGGLSGFTKRSESPYDPFGAAHAATSISAALGFCAARDQKGEDHKVIAVIGDGS 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNA     ++ VILNDN  +S+         PPVG +S+ L+ L S    
Sbjct: 152 MSAGMAYEAMNNAAETTRNLTVILNDN-DMSIA--------PPVGGMSAYLANLVSGGAY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           + +R   K V +++   + EL  K +E++R  ++G   T FEELG YY+GP+DGHN++ L
Sbjct: 203 QAVRRWGKSVAERLPRSIFELVRKSEEFSRTYVTGG--TFFEELGFYYVGPIDGHNMEHL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
             +L  V+  +   PVL+HVVT+KG+GY  AE AADKYHGVAKFD  TG+Q K  +   S
Sbjct: 261 CQVLRRVREIRDR-PVLVHVVTQKGKGYEPAENAADKYHGVAKFDVITGEQSKPKSNAPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA  LI +A  D  +VAI AAM  GTGL+ F   FPTRC+DVGIAEQHAVTFAAGL
Sbjct: 320 YTEVFASELIKQARRDDRIVAITAAMPSGTGLDRFAEVFPTRCYDVGIAEQHAVTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+KPFCAIYS+F+QR YDQV HDV LQ LPVRFA+DRAGLVGADG TH G+FD+ ++
Sbjct: 380 AAEGMKPFCAIYSTFLQRGYDQVAHDVSLQNLPVRFAIDRAGLVGADGATHAGAFDIGYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LP M++MA SDEAEL  M+ATA A DD PS FRYPRG+G+GV +P  +   PL +GKG
Sbjct: 440 GALPQMMIMAASDEAELAAMIATATAYDDGPSAFRYPRGDGVGVTIP--DVAQPLAIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ EG +VA+L  G  +Q  L A+ +L + GL  TVADARF KPLD  LI  LA+ HE 
Sbjct: 498 RIVREGSKVAILSLGARLQEALKAADMLAARGLSTTVADARFAKPLDKDLILQLARHHEC 557

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEGS+GGFG  V+ +LA +G LD  +K R L LPD Y D  S  +Q A+AGL  + 
Sbjct: 558 LITVEEGSVGGFGGFVLHYLAGEGALDNALKIRTLTLPDVYQDQDSQTNQYAEAGLDAAG 617

Query: 541 IAATVFNILG 550
           I  T    LG
Sbjct: 618 IVLTAVRALG 627


>gi|339320004|ref|YP_004679699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
           mitochondrii IricVA]
 gi|338226129|gb|AEI89013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Midichloria
           mitochondrii IricVA]
          Length = 624

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/550 (51%), Positives = 370/550 (67%), Gaps = 15/550 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G++GFTKR+ES YD FG GHSSTSISA LG A  RD+K + N+V+AVIGDGA
Sbjct: 88  MSTIRQPGGIAGFTKRNESIYDPFGAGHSSTSISAALGFAAARDIKKQNNHVIAVIGDGA 147

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNA  L++ M+VILNDNK             P VGA+SS L++L S+R  
Sbjct: 148 MSAGMAFEALNNASMLNTKMLVILNDNKM---------SIAPAVGAMSSYLAKLLSSRQY 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R +AK        P  E   K  +     ++ +GS  FEE+G +YIGPV GH++D L
Sbjct: 199 YKARNIAKNALHYT--PFFEKVVKNVQKCTKRLA-TGSNFFEEIGFHYIGPVGGHSLDQL 255

Query: 181 VAILEEVK-NTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           + +L  ++ N +   P+L+H+ TEKGRG+   EK+ + YH V  FD  T  Q K      
Sbjct: 256 IPVLRNIRDNDQVNKPILLHIRTEKGRGFDSPEKSLESYHAVLPFDLQTKIQKKPEKSYL 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SY+  FA  L   A+ +K+VVAI AAM  GTGL+L ++  P + +DVGIAEQHAVTFAAG
Sbjct: 316 SYSKVFASTLTKIAKKNKEVVAITAAMPSGTGLDLMIKELPDQVYDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA  G KPF AIYS+F+QRAYDQ++HDV +Q LPVRF +DRAGLVGADGPTH GSFD+ +
Sbjct: 376 LAAAGTKPFVAIYSTFLQRAYDQIIHDVAIQSLPVRFMLDRAGLVGADGPTHAGSFDLAY 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LPN + MAPSDEAEL  MV TA  I+  PS  RYP+     +E     +  PLE+GK
Sbjct: 436 LCNLPNFICMAPSDEAELAKMVFTAYQINHCPSAVRYPKAKTNSIEF--NYELEPLEIGK 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GR++ +GER+A+L  GT +Q C+  S +L+ +G  +T+ADARF KP+D  LIR LA SH+
Sbjct: 494 GRVIQKGERIAILSLGTRLQECIKTSEMLKKDGFDITIADARFAKPIDTELIRDLASSHD 553

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           +L+TVEEG+IGGFGS V QFL  DGLLDG +K+R L LPD +I+  +      +AGL   
Sbjct: 554 ILLTVEEGAIGGFGSSVAQFLLNDGLLDGKLKFRLLCLPDYFIEQNTVQQMYEEAGLNTR 613

Query: 540 HIAATVFNIL 549
            +  T+ N+L
Sbjct: 614 DMCQTIKNLL 623


>gi|339505914|ref|YP_004716612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter litoralis Och
           149]
 gi|338759907|gb|AEI96370.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Roseobacter litoralis
           Och 149]
          Length = 645

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/567 (53%), Positives = 386/567 (68%), Gaps = 18/567 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGFTKRSESEYD FG  HSSTSISA LG  V RD+     + VAVIGDG+
Sbjct: 93  MPTLRQGGGISGFTKRSESEYDPFGAAHSSTSISAALGFTVSRDMGQPTGDAVAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR-- 118
           ++AG AYEA+NNAG+    M VILNDN ++S+         PPVGA+SS LS L      
Sbjct: 153 ISAGMAYEALNNAGHEGRRMFVILNDN-EMSIA--------PPVGAMSSYLSSLSELSRV 203

Query: 119 -PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
            P   L  +A+G+ +    P+ + A +  E   G+   S  T FEELG  YIGP+DGH++
Sbjct: 204 GPFGGLVAIAEGMEQLAPKPVRDGARRARELVTGL--ESRGTFFEELGFDYIGPIDGHDM 261

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           + L+++L   K  + TGPVLIH  T KG+GY  AE +ADKYHGV+KF+  TG Q K+ A 
Sbjct: 262 EQLLSVLRGAK-ARATGPVLIHCCTVKGKGYAPAEGSADKYHGVSKFNVGTGVQAKAKAN 320

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F +AL + AE D  VVA+ AAM  GTG++   +RFP R FDVGIAEQH VTFA
Sbjct: 321 APSYTAVFGDALTSLAEEDPSVVAVTAAMPSGTGVDRMAKRFPNRVFDVGIAEQHGVTFA 380

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           A +A  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADG TH GSFD+
Sbjct: 381 AAMAATGLKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDI 440

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            ++  LP MVVMA +DEAEL HMVATA A +D P  FRYPRGNG GV LP    G  LE+
Sbjct: 441 GYLGALPGMVVMAAADEAELVHMVATAGAHNDGPIAFRYPRGNGTGVPLP--EMGRVLEI 498

Query: 418 GKGRILIEGE-RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           GKGR++ EG+  VA+L  GT +  C AA+ +LE+ G+  T+ADARF KPLD  LI +L +
Sbjct: 499 GKGRMIREGDGEVAILSLGTLLSDCEAAARMLEAEGINATIADARFAKPLDMELIANLVQ 558

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +H+ LITVE+G++GGFG+ V+Q +A +GLLD   K R + LPDR+ID  SP +   +AGL
Sbjct: 559 NHKALITVEQGAMGGFGAMVLQSMAAEGLLDLGCKLRTICLPDRFIDQASPTEMYREAGL 618

Query: 537 TPSHIAATVFNILGQTREALEIMSFKS 563
               I   V  +LG+  + + + + ++
Sbjct: 619 DTLGIVEQVTRVLGRDLKVVNLNANRT 645


>gi|110677515|ref|YP_680522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Roseobacter denitrificans
           OCh 114]
 gi|118595484|sp|Q16DV7.1|DXS1_ROSDO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|109453631|gb|ABG29836.1| 1-deoxy-D-xylulose-5-phosphate synthase, putative [Roseobacter
           denitrificans OCh 114]
          Length = 645

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/555 (54%), Positives = 378/555 (68%), Gaps = 18/555 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGFTKRSESEYD FG  HSSTSISA LG  + RD+     + VAVIGDG+
Sbjct: 93  MPTLRQGGGISGFTKRSESEYDPFGAAHSSTSISAALGFTISRDMGQPTGDAVAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR-- 118
           ++AG AYEAMNNAG+    M VILNDN ++S+         PPVGA+SS LS L      
Sbjct: 153 ISAGMAYEAMNNAGHEGRRMFVILNDN-EMSIA--------PPVGAMSSYLSSLSELSRA 203

Query: 119 -PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
            P   L  +A+G+ +    P+ + A +  E   G+   +  T FEELG  YIGP+DGH++
Sbjct: 204 GPFGGLVAIAEGMEQLAPKPVRDGARRARELVTGL--ENRGTFFEELGFDYIGPIDGHDM 261

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+++L   K  + TGPVLIH  T KG+GY  AE +ADKYHGV+KFD  TG Q K+ A 
Sbjct: 262 AQLLSVLRGAK-ARATGPVLIHCCTVKGKGYAPAEGSADKYHGVSKFDVGTGVQAKAKAN 320

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F +AL   AE D  VVA+ AAM  GTG++   +RFP R FDVGIAEQH VTFA
Sbjct: 321 APSYTAVFGDALTTLAEEDPSVVAVTAAMPSGTGVDRMAKRFPNRVFDVGIAEQHGVTFA 380

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           A +A  GLKPFCAIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADG TH GSFD+
Sbjct: 381 AAMAATGLKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGATHAGSFDI 440

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            ++  LP MVVMA +DEAEL HMVATA A +D P  FRYPRGNG GV LP    G  LE+
Sbjct: 441 GYLGALPGMVVMAAADEAELVHMVATAGAHNDGPIAFRYPRGNGTGVPLP--ETGRVLEI 498

Query: 418 GKGRILIEGE-RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           GKGR++ EG+  VA+L  GT +  C AA+ +LE+ G+  T+ADARF KPLD ALI +L +
Sbjct: 499 GKGRMIREGDGEVAILSLGTLLSDCEAAARILEAEGINATIADARFAKPLDMALIANLVQ 558

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +H+ LITVE+G++ GFG+ V+Q +A +GLLD   K R + LPDR+ID  +PA+    AGL
Sbjct: 559 THKALITVEQGAMAGFGAMVLQSMAAEGLLDLGCKVRTMCLPDRFIDQAAPAEMYRDAGL 618

Query: 537 TPSHIAATVFNILGQ 551
               I   V  +LG+
Sbjct: 619 DTMGIVEQVTRVLGR 633


>gi|408376776|ref|ZP_11174380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
 gi|407749466|gb|EKF60978.1| 1-deoxy-D-xylulose-5-phosphate synthase [Agrobacterium albertimagni
           AOL15]
          Length = 629

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/558 (53%), Positives = 365/558 (65%), Gaps = 47/558 (8%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++R+ DGLSGFT+R ES +D FG  HSSTSISAGLG A  RDLKG+  +VV +IGDGA
Sbjct: 98  MRSLRKKDGLSGFTRRGESPFDPFGAAHSSTSISAGLGFATARDLKGQDGHVVCIIGDGA 157

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EAMNNAG     +IVILNDN  +S+  +T        GAL+  LS ++ N   
Sbjct: 158 MSAGMAFEAMNNAGASGRPLIVILNDN-DMSISAST--------GALNRHLSDVRRN--- 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                              +   +FE  G  Y GPVDGH++D L
Sbjct: 206 --------------------------------TGTNAGNVFENFGFDYRGPVDGHDLDVL 233

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L E+++ K  GP+L+HVVT KG GY  AE A DKYHGV  FD  TGKQ K+ A+  S
Sbjct: 234 IPLLAELRDEKD-GPILLHVVTRKGAGYAPAEAAEDKYHGVNPFDVTTGKQNKTEAKAPS 292

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ALIAEAE D  +VAI AAM  GTG++ F   FP R FDVGIAEQHAVTFAAGL
Sbjct: 293 YTRVFADALIAEAEKDDRIVAITAAMAAGTGVDRFGAAFPDRTFDVGIAEQHAVTFAAGL 352

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYS+F+QRAYDQ+VHDV LQ+LPVRFA+DRAGLVG+DGPTH G+FD+ ++
Sbjct: 353 AAAGMKPFCAIYSTFLQRAYDQIVHDVALQQLPVRFAIDRAGLVGSDGPTHAGAFDILYL 412

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           A LP   VMA SDEAEL HMVATAAA D  P  FRYPRG G GV LP   +G  L +G+G
Sbjct: 413 ANLPGFTVMAASDEAELMHMVATAAAHDHGPIAFRYPRGEGTGVPLPI--RGDVLPIGRG 470

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI+ +G ++ALL +GT +  CL A  LL   G+ +TVADARF KPLD AL+  L  +H +
Sbjct: 471 RIIEQGGQIALLSFGTRLADCLKARRLLALEGISVTVADARFAKPLDTALLAELVDNHSM 530

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           L+T+EEG+ GGFG+ V+  LA  G+LDG    R L LPD +I   SP D   +A LT  H
Sbjct: 531 LVTIEEGATGGFGALVLHHLANRGMLDGRCAVRTLTLPDTFIAQASPEDMYEEAKLTARH 590

Query: 541 IAATVFNILGQTREALEI 558
           IAA   N L   R   +I
Sbjct: 591 IAAAARNGLTVARPNADI 608


>gi|294676253|ref|YP_003576868.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodobacter capsulatus SB
           1003]
 gi|141323|sp|P26242.1|DXS_RHOCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|46140|emb|CAA77557.1| 641 aa (68 kD) gene product of ORF641 [Rhodobacter capsulatus]
 gi|294475073|gb|ADE84461.1| 1-deoxy-D-xylulose-5-phosphate synthase-1 [Rhodobacter capsulatus
           SB 1003]
          Length = 641

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/548 (54%), Positives = 372/548 (67%), Gaps = 18/548 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF KRSES +D FG GHSSTSISA LG AVGR+L     + +A+IGDG+
Sbjct: 95  MLTLRQAGGISGFPKRSESPHDAFGAGHSSTSISAALGFAVGRELGQPVGDTIAIIGDGS 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEA+N+AG+L S M VILNDN  +S+         PPVGAL   L+ +    P 
Sbjct: 155 ITAGMAYEALNHAGHLKSRMFVILNDN-DMSIA--------PPVGALQHYLNTIARQAPF 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISG--SGSTLFEELGLYYIGPVDGHNVD 178
             L+  A+G+   + GP+ + A +    AR M++    G+TLFEELG  YIGPVDGH++ 
Sbjct: 206 AALKAAAEGIEMHLPGPVRDGARR----ARQMVTAMPGGATLFEELGFDYIGPVDGHDMA 261

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LV  L  V   + +GPVLIHV T KG+GY  AE A DK HGV+KFD  TGKQ KS    
Sbjct: 262 ELVETLR-VTRARASGPVLIHVCTTKGKGYAPAEGAEDKLHGVSKFDIETGKQKKSIPNA 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F E L  EA  D+ +VA+ AAM  GTGL++  +RFP R FDVGIAEQHAVTFAA
Sbjct: 321 PNYTAVFGERLTEEAARDQAIVAVTAAMPTGTGLDIMQKRFPRRVFDVGIAEQHAVTFAA 380

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A  GLKPF A+YSSF+QR YDQ+VHDV LQ LPVR  +DRAGLVG DG TH G+FDV+
Sbjct: 381 GMAAAGLKPFLALYSSFVQRGYDQLVHDVALQNLPVRLMIDRAGLVGQDGATHAGAFDVS 440

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
            +A LPN  VMA +DEAEL HMV TAAA D  P   RYPRG G GVE+P   +G  LE+G
Sbjct: 441 MLANLPNFTVMAAADEAELCHMVVTAAAHDSGPIALRYPRGEGRGVEMP--ERGEVLEIG 498

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++ EG  VA+L +G  +   L A+ +LE+ G+  TVADARFC+PLD  LI  L + H
Sbjct: 499 KGRVMTEGTEVAILSFGAHLAQALKAAEMLEAEGVSTTVADARFCRPLDTDLIDRLIEGH 558

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
             LIT+E+G++GGFG+ V+ +LA+ G L+     R + LPD YIDHGSP +  A AGLT 
Sbjct: 559 AALITLEQGAMGGFGAMVLHYLARTGQLEKGRAIRTMTLPDCYIDHGSPEEMYAWAGLTA 618

Query: 539 SHIAATVF 546
           + I  T  
Sbjct: 619 NDIRDTAL 626


>gi|254501855|ref|ZP_05114006.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
 gi|222437926|gb|EEE44605.1| 1-deoxy-D-xylulose-5-phosphate synthase [Labrenzia alexandrii
           DFL-11]
          Length = 619

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 296/546 (54%), Positives = 361/546 (66%), Gaps = 48/546 (8%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+R+ DGLSGFTKRSES YD FG  HSSTSISAGLG AV RDL+G+  +VV VIGDGA
Sbjct: 86  MRTLRKKDGLSGFTKRSESPYDPFGAAHSSTSISAGLGFAVARDLEGKDGHVVCVIGDGA 145

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRL-QSNRP 119
           MTAG AYE  NNAG+L+S MIVILNDN  +S+         PP GALS  L+ L QS+  
Sbjct: 146 MTAGMAYEGFNNAGHLNSRMIVILNDN-NMSIS--------PPTGALSDHLNTLAQSDTV 196

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            RE                                    + FE +G  Y GPVDGH++  
Sbjct: 197 QRE-----------------------------------RSFFENMGFAYHGPVDGHDIPT 221

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+A L  +K  + TGPV++H +T KG GY +AE A+DKYHGV+KFD  +GKQ KS  +  
Sbjct: 222 LLATLRHLKE-EGTGPVVLHAITRKGAGYVHAEAASDKYHGVSKFDVPSGKQSKSVPKAP 280

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  FA ALI EA  D  V+AI AAM  GTG++LF +++P R FDVGIAEQHAVTFA G
Sbjct: 281 SYTKVFANALIEEARQDDRVIAITAAMAEGTGVDLFGKQYPDRSFDVGIAEQHAVTFAGG 340

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA  G++PFCAIYS+F+QR YDQVVHD+ LQ LPVRFA+DRAGLVGADG TH G+FD+ F
Sbjct: 341 LAAGGMRPFCAIYSTFLQRGYDQVVHDIALQNLPVRFAIDRAGLVGADGATHAGAFDIGF 400

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +A LPN  VMA +DEAEL +MV TAA  D  P  FRYPRG G G +LP   + + L +GK
Sbjct: 401 LANLPNFTVMAAADEAELVNMVKTAAEHDLGPIAFRYPRGEGTGAQLPV--QPVALPIGK 458

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           GRI+  G   ALL +G  ++ CL A ALL + G+ +TVADARF KPLD  LI  L ++HE
Sbjct: 459 GRIVDIGHTAALLSFGGRLEQCLEARALLSALGISVTVADARFAKPLDTELIEDLVETHE 518

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           +L+TVEEG+ GGFG+ V+  LA  GLLDG    R + LPD +I   SP +   +AGL   
Sbjct: 519 LLVTVEEGATGGFGALVLHHLADKGLLDGRCGVRTMTLPDTFISQASPWEMYNEAGLNAR 578

Query: 540 HIAATV 545
            IA  V
Sbjct: 579 QIADLV 584


>gi|260574952|ref|ZP_05842954.1| deoxyxylulose-5-phosphate synthase [Rhodobacter sp. SW2]
 gi|259022957|gb|EEW26251.1| deoxyxylulose-5-phosphate synthase [Rhodobacter sp. SW2]
          Length = 632

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 297/554 (53%), Positives = 373/554 (67%), Gaps = 23/554 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  G+SGFTKRSESEYD FG  HSSTSISA LG AV RDL       +AVIGDG+
Sbjct: 93  MRSLRQGGGISGFTKRSESEYDPFGAAHSSTSISAALGFAVARDLGMPTGEAIAVIGDGS 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG AYEAMNNAG +   + VILNDN  +S+         PPVGA+S  L++L +  P 
Sbjct: 153 ITAGMAYEAMNNAGDMHKRLFVILNDN-DMSIA--------PPVGAMSRYLNQLNNGAPF 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISG--SGSTLFEELGLYYIGPVDGHNVD 178
             LR  A+G+   + GP+ + A +    AR +I+G   G TLFEELG  YIGP+DGH++ 
Sbjct: 204 AALRAAAEGIEASLPGPLRDGARR----ARQLITGIPGGGTLFEELGFTYIGPIDGHDMA 259

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            ++A L   +  + TGPV+IH +T KG+GYP AE A DKYHGV +FD  +G Q KS +  
Sbjct: 260 QVLATLRTAR-ARATGPVMIHALTVKGKGYPPAEHALDKYHGVGRFDVESGTQAKSKSNA 318

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  F  AL   A +D  +VA+ AAM  GTG+++   +FP R FDVGIAEQH VTFAA
Sbjct: 319 PSYTGVFGTALANAAALDTRIVAVTAAMPSGTGVDIMAAKFPARVFDVGIAEQHGVTFAA 378

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
            +A  GL+PF AIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVG DG TH G+FDV 
Sbjct: 379 AMAAAGLRPFVAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGQDGATHAGAFDVG 438

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+A LP MVVMA  DEA+L HMVATAAA DD P  FRYPRG G GVE+P  + G  L +G
Sbjct: 439 FLADLPGMVVMAAGDEADLVHMVATAAAYDDGPIAFRYPRGEGRGVEVP--SPGEILPIG 496

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR+L +G+ +ALL +G  +  CL A+ LLE++G+ +TVADARF KPLD  LI  L + H
Sbjct: 497 KGRVLRQGDDLALLSFGAHLGECLIAADLLEADGISVTVADARFAKPLDTDLITQLVRHH 556

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           + +ITVE+GS GGF + V+ +LA  G  D     R L LPDR+I+  SPA     AG+T 
Sbjct: 557 KAVITVEQGSAGGFAAQVLHYLANSGGFDRGAVVRTLTLPDRFIEQASPAAMYLDAGMTA 616

Query: 539 SHIAATVFNILGQT 552
             I      +L QT
Sbjct: 617 QDI-----RLLAQT 625


>gi|11493204|emb|CAC17468.1| 1-deoxy-D-xylulose 5-phosphate synthase [Nicotiana tabacum]
          Length = 294

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/294 (90%), Positives = 281/294 (95%)

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAEALIAEAE DKD+VAIHAAMGGGTG+NLF RRFPTRCFDVGIAEQHAVTFAAGL
Sbjct: 1   YTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFHRRFPTRCFDVGIAEQHAVTFAAGL 60

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKPFCAIYSSF+QRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG+FDVTFM
Sbjct: 61  ACEGLKPFCAIYSSFLQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFM 120

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           ACLPNMVVMAPSDE ELFHMVATAAAIDDRPSCFRYPRGNGIGVELP GNKG PLEVGKG
Sbjct: 121 ACLPNMVVMAPSDETELFHMVATAAAIDDRPSCFRYPRGNGIGVELPVGNKGTPLEVGKG 180

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RIL+EGERVALLGYG+AVQ+CLAA+A+LES GL++TVADA FCK LDHALIRSLAKSHEV
Sbjct: 181 RILVEGERVALLGYGSAVQNCLAAAAVLESRGLQVTVADAPFCKRLDHALIRSLAKSHEV 240

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           LITVEEGSIGGFGSHV QF+A DGLLDG +KWR +VLPDRYIDHGSP DQLA+A
Sbjct: 241 LITVEEGSIGGFGSHVAQFMALDGLLDGKLKWRRIVLPDRYIDHGSPVDQLAEA 294


>gi|163760422|ref|ZP_02167504.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
 gi|162282373|gb|EDQ32662.1| deoxyxylulose-5-phosphate synthase [Hoeflea phototrophica DFL-43]
          Length = 675

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 296/542 (54%), Positives = 362/542 (66%), Gaps = 14/542 (2%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGFTKR+ESEYD FG  HSSTSISAGLG A  R       + +AVIGDGA
Sbjct: 123 MATLRQDGGLSGFTKRAESEYDPFGAAHSSTSISAGLGFATARSFGFGDGDAIAVIGDGA 182

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG AYEAMNNAG +   + VILNDN+    P+         VGA S  LS L +  P 
Sbjct: 183 MSAGMAYEAMNNAGTMGKRLFVILNDNEMSISPS---------VGAFSKHLSALCTQAPA 233

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +  + +     +  P    AA+  + A G ++G+ S+LFE +G  YIGPVDGH++  L
Sbjct: 234 IGMDVMMRKAASMLPEPFKTGAARARQ-AVGALAGT-SSLFEHMGFSYIGPVDGHDLPQL 291

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +AIL  V+N    GPVLIH +T KG GY  AE +ADKYHGV  FD  TG   KS     +
Sbjct: 292 LAILRTVRNV-ADGPVLIHAITRKGAGYAPAENSADKYHGVGSFDAETGALSKSKPSAPA 350

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+AL  EA+ D  VVAI AAM  GTGL++F +  P R FDVGIAEQHAVTFAAGL
Sbjct: 351 YTKVFAKALCDEADRDPGVVAITAAMASGTGLDVFSQAHPERMFDVGIAEQHAVTFAAGL 410

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G+KPFCAIYS+F+QRAYDQ+VHDV +Q LPVRFA+DRAGLVGADGPTH G+FDV ++
Sbjct: 411 AAAGMKPFCAIYSTFLQRAYDQIVHDVAIQGLPVRFAIDRAGLVGADGPTHAGAFDVAYL 470

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           + LP   VMA +DEAEL HMVATA A D  P  FRYPRG G GV LP   +G P+ +GKG
Sbjct: 471 SNLPGFTVMAAADEAELVHMVATATAHDSGPIAFRYPRGEGTGVALP--ERGTPIPIGKG 528

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG  +A L +GT +  C  A+ +L + GL  TVADARF KPLD  LI  LA SH+ 
Sbjct: 529 RVIREGRDIAFLSFGTRLGECEKAADILAARGLSATVADARFAKPLDIELIERLASSHDA 588

Query: 481 LITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSH 540
           LITVEEG+ GGFG+ V++ LA  G LDG+   R L LPD +  H SP+    ++GL   H
Sbjct: 589 LITVEEGAGGGFGARVLEHLAAAGRLDGSFAIRTLTLPDHFEAHASPSVMYERSGLAAPH 648

Query: 541 IA 542
           +A
Sbjct: 649 LA 650


>gi|407782343|ref|ZP_11129556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
 gi|407206073|gb|EKE76035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oceanibaculum indicum P24]
          Length = 602

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 287/555 (51%), Positives = 361/555 (65%), Gaps = 56/555 (10%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R+ DG SGFT+R+ES YD FG  HSSTSISAGLG A+ R+L G   +VV VIGDGA
Sbjct: 73  MLGLRKKDGPSGFTRRAESPYDPFGAAHSSTSISAGLGFAMARELGGDPGDVVCVIGDGA 132

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG L   + VILNDN     P+          GA ++ L+ L + RP 
Sbjct: 133 MSAGMAFEAINNAGALGKRIFVILNDNAMSISPS---------TGAFATYLAELGA-RP- 181

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
                                             G   + F ++G  Y GPVDGH   DL
Sbjct: 182 ----------------------------------GEERSFFAQMGFAYHGPVDGH---DL 204

Query: 181 VAILEEVKNTK--TTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
             +LE++++ +   TGPVL+H +T KG GY  AE +ADKYHGVAKFD  TG+Q K++A  
Sbjct: 205 PGLLEKLRSLREEATGPVLLHAITRKGAGYDAAETSADKYHGVAKFDVETGQQAKAAAAA 264

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  FA AL+ EAE D  ++AI AAM  GTG+++F R FP R FDVGIAEQHAVTFAA
Sbjct: 265 PSYTKVFAGALVKEAEKDSRIIAITAAMEAGTGVDIFRRHFPDRAFDVGIAEQHAVTFAA 324

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G+KPFCAIYS+F+QR YDQ+VHDV LQ LPVRFA+DRAGLVGADGPTH G+FDV 
Sbjct: 325 GLAAGGMKPFCAIYSTFLQRGYDQIVHDVALQGLPVRFAIDRAGLVGADGPTHAGAFDVG 384

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++A LP   VMA SDEAEL +MVATAAA D  P  FRYPRG G GV +P    G+PL +G
Sbjct: 385 YLANLPGFTVMAASDEAELVNMVATAAAHDSGPIAFRYPRGEGTGVAMP--ETGVPLPIG 442

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KGR++  G  VALL +G  +  CL A  +L ++G+ +TVADARF KPLD  L+  L ++H
Sbjct: 443 KGRVVAAGGTVALLSFGGRLGECLMARQMLATHGIPVTVADARFAKPLDTGLLEELYETH 502

Query: 479 EVLITVEEGSIGGFGSHVVQFLAQDGLLDGTV----KWRPLVLPDRYIDHGSPADQLAQA 534
           E+L+T+EEG+ GGF + V+  LA  GLLDG +      R + LPDR+I   SP +    A
Sbjct: 503 ELLVTIEEGASGGFAALVLSHLAGRGLLDGHLGSRCALRTMTLPDRFIAQASPEEMYEDA 562

Query: 535 GLTPSHIAATVFNIL 549
           GL+  HIA  V ++L
Sbjct: 563 GLSAHHIALLVRDVL 577


>gi|349700050|ref|ZP_08901679.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 575

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/486 (55%), Positives = 344/486 (70%), Gaps = 30/486 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 103 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 162

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 163 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 213

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YYIGP
Sbjct: 214 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYIGP 271

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 272 VDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGEQ 331

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 332 KKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 391

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 392 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 451

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 452 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAGLGLELPAA-- 509

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L + GL  TVADARF 
Sbjct: 510 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLSPTVADARFA 569

Query: 464 KPLDHA 469
           KP+D A
Sbjct: 570 KPIDTA 575


>gi|349700982|ref|ZP_08902611.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Gluconacetobacter
           europaeus LMG 18494]
          Length = 578

 Score =  520 bits (1339), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 270/486 (55%), Positives = 344/486 (70%), Gaps = 30/486 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKG------RKNNVVA 54
           + T+RQ  GLSGFT+RSESEYD FG  HSSTSISAGLGMAV   L+       R+ NV+A
Sbjct: 106 IRTLRQPGGLSGFTRRSESEYDPFGAAHSSTSISAGLGMAVAHHLRAEEDPSYRERNVIA 165

Query: 55  VIGDGAMTAGQAYEAMNNAGYLD---SDMIVILNDNKQVSLPTATLDGPIPPVGALSSAL 111
           VIGDG+++AG AYEAMNNA +       +IV+LNDN ++S+         PPVGA+S+ L
Sbjct: 166 VIGDGSISAGMAYEAMNNASHCGPGAERLIVVLNDN-EMSI--------APPVGAMSNYL 216

Query: 112 SRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGP 171
           SRL S+R    LRE+A  + K++ G +   A K DEYARG+++G   TLFEELG YYIGP
Sbjct: 217 SRLMSSRKFLSLRELAAKMAKRLPGRLERTAKKADEYARGIMTGG--TLFEELGFYYIGP 274

Query: 172 VDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQ 231
           VDGH+++ LV IL  +++ +  GPVL+HV+TEKG GY  AE A DKYH V+KF+  TG+Q
Sbjct: 275 VDGHDMNQLVHILRNLRDAEDVGPVLVHVITEKGHGYTPAESAGDKYHAVSKFNVVTGEQ 334

Query: 232 FKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
            K  +   SYT+ FA+ L+ +A  D  +V I AAM  GTGL+ F + +P R FDVGIAEQ
Sbjct: 335 KKGPSGPPSYTSVFAKELVRQAATDDRIVTITAAMPSGTGLDKFAKAYPDRFFDVGIAEQ 394

Query: 292 HAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTH 351
           HAVTFAAG+A EGL+PFCAIYS+F+QRAYDQV+HDV LQKLPVRFA+DRAGLVGADG TH
Sbjct: 395 HAVTFAAGMATEGLRPFCAIYSTFLQRAYDQVMHDVVLQKLPVRFAIDRAGLVGADGATH 454

Query: 352 CGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNK 411
            G+FD+ ++ CLP M +MAPS+E EL HM AT+ A D+ P   RYPRG G+G+ELP    
Sbjct: 455 AGAFDIAYLGCLPGMTLMAPSNELELLHMTATSIAFDEGPIGLRYPRGAGLGLELPAA-- 512

Query: 412 GIPLEVGKGRILIEGER--------VALLGYGTAVQSCLAASALLESNGLRLTVADARFC 463
           G  LE+G+GRI+ E  R        +A+L  G  ++  L A+ +L + GL  TVADARF 
Sbjct: 513 GQILEIGRGRIVREMTRQSGPEQGGIAILSLGPRLEDALKAADMLAAQGLSPTVADARFA 572

Query: 464 KPLDHA 469
           KP+D A
Sbjct: 573 KPIDTA 578


>gi|377648348|gb|AFB70978.1| 1-deoxy-D-xylulose 5-phosphate synthase, partial [Mitragyna
           speciosa]
          Length = 313

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 263/294 (89%), Positives = 276/294 (93%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQTDGLSGFTKRSESEYDCFG GHSSTSISAGLGMAVGRDLKGRKN+VVAVIGDGA
Sbjct: 20  MPTLRQTDGLSGFTKRSESEYDCFGAGHSSTSISAGLGMAVGRDLKGRKNHVVAVIGDGA 79

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGP+PPVGALSSALSRLQSNRPL
Sbjct: 80  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPVPPVGALSSALSRLQSNRPL 139

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           RELREVAKGVTKQIGG +HELAAKVDEYARG+ISGSGSTLFEELG YYIGPVDGH++DDL
Sbjct: 140 RELREVAKGVTKQIGGSVHELAAKVDEYARGLISGSGSTLFEELGFYYIGPVDGHSIDDL 199

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VAIL+EVK+TKTTGPVLIHVVTEKGRGYPYAEKAADKYHGV KFDPATGKQFKSS +TQS
Sbjct: 200 VAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVVKFDPATGKQFKSSGKTQS 259

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           YTTYFAEAL+AEAE DKDVVAIHAAMG    +  F   FP + FDVGIAEQHAV
Sbjct: 260 YTTYFAEALVAEAEADKDVVAIHAAMGRWNRVEPFPSSFPNKMFDVGIAEQHAV 313


>gi|406707992|ref|YP_006758344.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB59]
 gi|406653768|gb|AFS49167.1| 1-deoxy-D-xylulose-5-phosphate synthase [alpha proteobacterium
           HIMB59]
          Length = 621

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 259/551 (47%), Positives = 369/551 (66%), Gaps = 18/551 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           +HT+R+ +GLSGFTKRSES YD FG  HSSTSISA LG+AV RDL+ +  +V+++IGDGA
Sbjct: 88  IHTLRKKNGLSGFTKRSESIYDPFGAAHSSTSISANLGIAVARDLQKKSFDVISIIGDGA 147

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG A+E +NN G+L  + ++ILNDN ++S+          PVGA+S  L  L S++  
Sbjct: 148 ISAGMAFEGLNNIGHLSKNSLIILNDN-EMSIA--------KPVGAMSKYLVNLLSSKTY 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+V K  TK++   +   A K + Y +G ++G+  TLFEELG+ YIGP+DGHN+D L
Sbjct: 199 ENIRDVVKNFTKKLPDEVGNFAKKTEGYLKGYLTGN--TLFEELGMNYIGPIDGHNLDLL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + + ++ K  +  GPV +H++TEKG+GY  AE + DK+HGV+ FD  TG Q KS  +T  
Sbjct: 257 IQLFQKYKEKELHGPVFLHIITEKGKGYAPAENSNDKFHGVSSFDIQTGVQNKSKDKT-- 314

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT+  +E L+  A+ DK V AI AAM  GTGL+ F   +P R FDVGIAEQHAVTFA G+
Sbjct: 315 YTSVISETLLKLAKKDKKVTAITAAMPSGTGLDKFQELYPDRFFDVGIAEQHAVTFAGGM 374

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A E +KPF AIYS+F+QRAYDQVVHD+ +Q LPVRF +DR+G VGADG TH GSFD+T++
Sbjct: 375 ATESMKPFVAIYSTFLQRAYDQVVHDIAIQSLPVRFLIDRSGFVGADGATHAGSFDLTYL 434

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            CLPN +VMAPS   EL +M+  + +I+++PS  RYPR + +G E         + +GKG
Sbjct: 435 CCLPNFIVMAPSSGEELKNMLNFSLSINNKPSAIRYPR-DTVG-EYNEKKSFEKITLGKG 492

Query: 421 RILIEGERVALLGYGTAVQSCLAASALL-ESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           +++ +G+++A L  GT ++    AS L+ + N  + T+ D RF KP+D  L+++L K+H+
Sbjct: 493 KVIQKGKKIAFLNLGTRLEQVKLASKLIKDKNKFQTTIIDMRFAKPIDTQLLKTLLKNHD 552

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           + ITVEE +IGGF S V  F      +   +K     + D +ID     DQ +Q+G++P 
Sbjct: 553 IFITVEENAIGGFSSQVNNFFLNQ--IKKQIKVLNFFMKDEFIDQSDINDQYSQSGISPE 610

Query: 540 HIAATVFNILG 550
            I   V N+L 
Sbjct: 611 EIYKKVSNLLN 621


>gi|374669416|gb|AEZ55866.1| chloroplast 1-deoxy-D-xylulose 5-phosphate synthase 2 [Mitragyna
           speciosa]
          Length = 492

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 241/321 (75%), Positives = 283/321 (88%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISAGLGMAVGRDL G+ N+V++VIGDGA
Sbjct: 172 MHTIRQTCGLAGFPKRDESVHDAFGAGHSSTSISAGLGMAVGRDLLGKANHVISVIGDGA 231

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNNAG+LDS++I++LNDNKQVSLPTATLDGP  PVGALS AL+++QS+R L
Sbjct: 232 MTAGQAYEAMNNAGFLDSNLIIVLNDNKQVSLPTATLDGPAAPVGALSKALTKMQSSRKL 291

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R+LRE AKGVTKQ+G   HE+AAKVD Y RG+++GSG++LFEELGLYYIGPVDGHN++DL
Sbjct: 292 RQLREAAKGVTKQLGNQAHEIAAKVDSYVRGVVNGSGASLFEELGLYYIGPVDGHNIEDL 351

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I ++VK+    GPVLIH++TEKG+GYP AE A+DK HGV KFDP TGKQ KSS++T++
Sbjct: 352 VYIFKKVKSMPAPGPVLIHIMTEKGKGYPPAEAASDKMHGVVKFDPQTGKQLKSSSKTKT 411

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YTTYFAE+L AEAE D  +VAIHAAMGGGTGLN+F +RFP RCFDVGIAEQHAVTFAAGL
Sbjct: 412 YTTYFAESLAAEAEQDDKIVAIHAAMGGGTGLNIFQKRFPHRCFDVGIAEQHAVTFAAGL 471

Query: 301 ACEGLKPFCAIYSSFMQRAYD 321
           A EGLKPFCAIYSSF+QR YD
Sbjct: 472 ATEGLKPFCAIYSSFLQRGYD 492


>gi|171363673|dbj|BAG14385.1| 1-deoxyxylulose-5-phosphate synthase [Perkinsus marinus]
          Length = 841

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 298/619 (48%), Positives = 384/619 (62%), Gaps = 77/619 (12%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNN--------- 51
           M T+RQ  GLSGFTKRSES YD FG GHS T++SA  G A+ RD K R ++         
Sbjct: 226 MSTLRQGGGLSGFTKRSESPYDPFGAGHSGTAMSAATGFAIARDHKKRVHDEAVREGGHT 285

Query: 52  -----------VVAVIGDGAMTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDG 99
                      VV+V+GDGA+T G AYEAMN+AG+L     +VILNDN QVSLPTA  + 
Sbjct: 286 TPPLSPEDDYTVVSVVGDGAITGGMAYEAMNHAGWLKLRKFLVILNDNGQVSLPTA-YNE 344

Query: 100 PIPPVGALSSALSRL--------------QSNRPLRELREVAKGVTKQIGGP-MHELAAK 144
              PVGALS ALS++               S+   ++ R   K   K +  P + E   +
Sbjct: 345 VHTPVGALSEALSKMGGMDSSVPDAISKVLSSPSFQDARNTLKLAVKALCPPQLAESLGR 404

Query: 145 VDEYARGMISG-SGSTLFEELGLYYIGPVDGHNVDDLVAILEEVKNT----KTTGPVLIH 199
           ++EY RG++S  S  T+FEELG YY+GPVDGH +D LV +L  +K +    K T P+L+H
Sbjct: 405 IEEYGRGLLSTYSRGTMFEELGFYYVGPVDGHCLDTLVTVLSNLKQSMDEGKITKPILLH 464

Query: 200 VVTEKGRGYPYAEKAADKYHGVAKFDPATGKQF-------------KSSARTQSYTTYFA 246
           V TEKG GY  AE A DK HGV +FD  TGK+                + +  +YT  FA
Sbjct: 465 VKTEKGHGYKPAEVALDKLHGVTQFDVKTGKKEVPTKVVEAPPTTETKAPKKMAYTDVFA 524

Query: 247 EALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFP-TRCFDVGIAEQHAVTFAAGLACEGL 305
           +ALIA AE D  +VAI AAM GGTGL+ F ++F   R FDVGI EQHAVT AAG+A EGL
Sbjct: 525 KALIAAAERDSRIVAITAAMPGGTGLHHFEKKFGLDRMFDVGICEQHAVTMAAGMAAEGL 584

Query: 306 KPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPN 365
            P+ AIYSSFMQRA DQ+VHDV LQKLPVRF +DRAG VGADGPTH G FD+  + C+P 
Sbjct: 585 VPYAAIYSSFMQRAIDQMVHDVALQKLPVRFVLDRAGFVGADGPTHHGQFDLAMLGCIPG 644

Query: 366 MVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP--LEVGKGRIL 423
           + + AP DEAEL +M+ T + +DD PS  R+PRG+G GV +P     +P  LE GKGR++
Sbjct: 645 VKICAPGDEAELSNMIYTMSKLDDGPSVVRFPRGSGEGVPIPV----VPEFLEPGKGRVV 700

Query: 424 -----IEGE-RVALLGYGTAVQSC-LAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
                 EGE  V LL  G  +  C  AA  L E  G  +TVADAR+ KPLD  +I  LA+
Sbjct: 701 KEYDGKEGELSVVLLSLGARLGECKKAAKVLSEKYGHHVTVADARWMKPLDETMICELAR 760

Query: 477 SHEVLITVEEGSIGGFGSHVVQFLAQDGLL-DGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
            H++++TVEEGSIGGFGSHV++ L   G+L DG +K   + +PD +    +P +QL +AG
Sbjct: 761 GHDIMVTVEEGSIGGFGSHVLELLTDKGILGDGKLKVGTIHIPDEWYQADTPENQLEKAG 820

Query: 536 LTPSHIAATVFNILGQTRE 554
           +       +V  I+G+ R+
Sbjct: 821 V-------SVDGIVGKARK 832


>gi|114320537|ref|YP_742220.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|122311762|sp|Q0A8V7.1|DXS_ALHEH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114226931|gb|ABI56730.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 628

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/535 (51%), Positives = 360/535 (67%), Gaps = 25/535 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+R+  GL+GF KR+ES YD FG GHSSTSISA LGMA+     G +   VA+IGDG MT
Sbjct: 97  TIRKYGGLAGFPKRAESPYDTFGVGHSSTSISAALGMALAARQAGEQRKAVAIIGDGGMT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG+A+EAMN+AG   +D++V+LNDN ++S+           VGALS  L+R+ S R   +
Sbjct: 157 AGEAFEAMNHAGDAGADLLVVLNDN-EMSISEN--------VGALSQHLTRILSGRWYHQ 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LR  +K V +++  P+HELA + +E+ +GM+     TLFEELG  Y GPVDGHNVD LV 
Sbjct: 208 LRSGSKEVLRRLPPPVHELARRTEEHLKGMVVPG--TLFEELGFQYFGPVDGHNVDALVE 265

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
           +L  + + +  GP L+HVVT KG+GY  AE+    YHGV +FDP  G   K S  + +Y 
Sbjct: 266 VLGNLAHQR--GPRLLHVVTCKGKGYRPAEQDPIAYHGVGQFDPEQGLP-KKSGGSLAYN 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F   L A AE D  +VAI  AM  G+G+  + RRFP R  DVGIAEQHAVT AAGLAC
Sbjct: 323 QVFGRWLCAMAEQDPRLVAITPAMREGSGMVEYARRFPERYHDVGIAEQHAVTLAAGLAC 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
           E +KP  AIYS+F+QR YDQ+VHDV LQ LPV FA+DRAGLVGADGPTH GSFD++++ C
Sbjct: 383 ESVKPVLAIYSTFLQRGYDQLVHDVALQNLPVLFAVDRAGLVGADGPTHHGSFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +PNM + APSDEAE + +++T     D P   RYPRG+G G  LP  +   PL +GKG  
Sbjct: 443 VPNMTIAAPSDEAECWRLLSTGYH-HDGPFAVRYPRGSGPGAALPEADLD-PLAIGKGVC 500

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              G R+A+L +GT V   LA +  L+     LTVAD RF +PLD ALIR LA +H++L+
Sbjct: 501 RRRGRRIAVLAFGTLVVPALAVAEALD-----LTVADMRFVRPLDEALIRELADTHDLLV 555

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           TVEE ++ GG GS V ++LA+ GL    V  R L LPDR++DHG+PA+ LA+ GL
Sbjct: 556 TVEENAVAGGAGSGVSEYLARAGL---DVPVRHLGLPDRFVDHGTPAELLAEVGL 607


>gi|117924355|ref|YP_864972.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus marinus
           MC-1]
 gi|226740156|sp|A0L6H3.1|DXS_MAGSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|117608111|gb|ABK43566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Magnetococcus marinus
           MC-1]
          Length = 622

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 280/551 (50%), Positives = 368/551 (66%), Gaps = 22/551 (3%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           ++RQ  GLSGFTKRSES YD FGTGHSSTSISA +GMA      G +   VAVIGDGAM 
Sbjct: 91  SIRQRHGLSGFTKRSESPYDPFGTGHSSTSISAAMGMARAAKANGIQRKAVAVIGDGAMG 150

Query: 63  AGQAYEAMNNAGY--LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           AG A+EA+N+AG+   D D++V+LNDN ++S+         P VGALSS L+R+ S    
Sbjct: 151 AGMAFEALNHAGHDNHDLDLVVVLNDN-EMSIS--------PNVGALSSYLNRMLSGGAY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+    V K I   M + A K +E+ +G++     TLFEELG  Y GP++GH+ D L
Sbjct: 202 NAFRDGTGKVLKTISRSMWDAAKKAEEHVKGLVMPG--TLFEELGFTYFGPINGHDFDAL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  V+  K  GP+L+HV+T+KG+G+P AE+    YHGVA FD  TG   +SS+   S
Sbjct: 260 LPTLRNVQ--KLGGPILLHVITKKGKGFPPAEEHPCTYHGVAPFDKDTGI-IQSSSGGTS 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ L A AE +  + AI AAM  GTGLNLF +RFP R  DVGIAEQHAVTFAAGL
Sbjct: 317 YTKVFAQELCALAEQNPHIHAITAAMREGTGLNLFEKRFPERFHDVGIAEQHAVTFAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EG+ P  AIYS+FMQRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D++++
Sbjct: 377 ATEGILPVVAIYSTFMQRAYDQLIHDVALQDLPVIFALDRAGLVGADGATHAGAYDLSYL 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             +P M +MAP+DE EL HM+ TA A+ ++P   RYPRG  +G  LPP    + LE+G+G
Sbjct: 437 RTVPGMTIMAPADENELRHMLHTAVAL-NKPVALRYPRGTALG--LPPEPPHV-LEIGRG 492

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R L +GE  A+L  G  V   L A+A+LE  G+ ++V DARF KPLD  L++ +A  H V
Sbjct: 493 RTLRKGEHAAILAVGQPVHPALEAAAILEQQGISVSVYDARFVKPLDQRLLQEVAM-HGV 551

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++ VEE ++ GGFGS V++ L+  G LD  +K R + +PDRYI HG+  +   + GL   
Sbjct: 552 VLVVEENAVQGGFGSAVLESLSNQGALDRGLKIRCMGIPDRYIPHGTQKELRGEIGLDAV 611

Query: 540 HIAATVFNILG 550
            IA T+  +LG
Sbjct: 612 GIATTLKELLG 622


>gi|387904758|ref|YP_006335096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. KJ006]
 gi|387579650|gb|AFJ88365.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia sp. KJ006]
          Length = 634

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 365/552 (66%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG+G GV        +P  +GK
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGSGTGVATVKEFTALP--IGK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRSSQPEGKRVAILAFGTMVAPSLAAADELDA-----TVANMRFVKPIDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L+Q
Sbjct: 547 AETHDYLVTVEEGCLMGGAGSACVEALMESGVIRPVLQ---LGLPDQFIDHGDPAKLLSQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDSAGIAKSI 615


>gi|209517793|ref|ZP_03266628.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
 gi|209501739|gb|EEA01760.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. H160]
          Length = 635

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/552 (51%), Positives = 361/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMAV   L+G     +AVIGDGA
Sbjct: 89  MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAVASKLQGDNRMGIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  P+ +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLR-VAPPVLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAATPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM VM PSDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 435 MRCIPNMTVMTPSDENECRQMLYTALQ-QSHPTAVRYPRGAGTGVATVKQMTAVPL--GK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD  L+R L
Sbjct: 492 GEVRRETSAPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDTELVRKL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEGSI GG GS  V+ L   G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGSIMGGAGSACVEALLASGVMRPVLQ---LGLPDRFIDHGDPAKLLAA 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIARSI 615


>gi|167566510|ref|ZP_02359426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
           EO147]
 gi|167573591|ref|ZP_02366465.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia oklahomensis
           C6786]
          Length = 634

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/552 (50%), Positives = 363/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  LKG     +AVIGDGA
Sbjct: 89  MKTLRQLDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLKGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  PM ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPMLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D++F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLSF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D  L++ L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEALDA-----TVANMRFVKPIDAELVQEL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G++   ++   L LPDR+IDHG PA  L+ 
Sbjct: 547 AQTHDYLVTVEEGCVMGGAGSACVEAMMESGVIRPVLQ---LGLPDRFIDHGDPAKLLSM 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDGDGIAKSI 615


>gi|134292966|ref|YP_001116702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
           G4]
 gi|134136123|gb|ABO57237.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia vietnamiensis
           G4]
          Length = 646

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 365/552 (66%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 101 MHTLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 160

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 161 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 211

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 212 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 268

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 269 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 326

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 327 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 386

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 387 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 446

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG+G GV        +P  +GK
Sbjct: 447 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGSGTGVATVKEFTALP--IGK 503

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 504 GEVRRRSSQPEGKRVAILAFGTMVAPSLAAADELDA-----TVANMRFVKPIDAALVREL 558

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L+Q
Sbjct: 559 AETHDYLVTVEEGCLMGGAGSACVEALMESGVIRPVLQ---LGLPDQFIDHGDPAKLLSQ 615

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 616 CGLDSAGIAKSI 627


>gi|170691119|ref|ZP_02882285.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
 gi|170144368|gb|EDT12530.1| deoxyxylulose-5-phosphate synthase [Burkholderia graminis C4D1M]
          Length = 635

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/552 (50%), Positives = 362/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 89  MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAIASKLQGDNRMGIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLR-VAPPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  S+   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPASAPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM+VM PSDE E   M+ TA      P+  RYPRG G GV        +P  VGK
Sbjct: 435 MRCIPNMMVMVPSDENESRQMLYTALQ-QSCPTAVRYPRGAGTGVATVKQMAALP--VGK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD  L+R L
Sbjct: 492 GEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDADLVRQL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L + G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGCVMGGAGSACVEALLESGVMRPVLQ---LGLPDRFIDHGDPAKLLAA 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIAKSI 615


>gi|187921414|ref|YP_001890446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phytofirmans
           PsJN]
 gi|187719852|gb|ACD21075.1| deoxyxylulose-5-phosphate synthase [Burkholderia phytofirmans PsJN]
          Length = 653

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 361/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 107 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAIASKLQGDNRTGIAVIGDGA 166

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 167 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 217

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 218 YAAARAGVERVLR-VAPPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 274

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 275 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPATTPSKK 332

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 333 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 392

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 393 LAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 452

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 453 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGTGVATVKQMAALPL--GK 509

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G I  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD AL+R L
Sbjct: 510 GEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDAALVRQL 564

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++T+EEG + GG GS  V+ L + G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 565 AETHDAIVTIEEGCVMGGAGSACVEALLESGVMRPVLQ---LGLPDRFIDHGDPAKLLAA 621

Query: 534 AGLTPSHIAATV 545
            GL  + I  ++
Sbjct: 622 CGLDAAGITKSI 633


>gi|171320201|ref|ZP_02909261.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
 gi|171094553|gb|EDT39607.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MEX-5]
          Length = 634

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/552 (51%), Positives = 362/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +   +   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSPTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA   L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELDA-----TVANMRFVKPIDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  LAQ
Sbjct: 547 AETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVIQ---LGLPDQFIDHGDPAKLLAQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|115358001|ref|YP_775139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           AMMD]
 gi|122321876|sp|Q0BAL8.1|DXS_BURCM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115283289|gb|ABI88805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           AMMD]
          Length = 646

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/552 (51%), Positives = 362/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 101 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 160

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 161 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 211

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 212 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 268

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +   +   +
Sbjct: 269 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSPTPAKK 326

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 327 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 386

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 387 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 446

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 447 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 503

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA   L++     TVA+ RF KP+D AL+R L
Sbjct: 504 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELDA-----TVANMRFVKPIDAALVREL 558

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  LAQ
Sbjct: 559 AETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVIQ---LGLPDQFIDHGDPAKLLAQ 615

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 616 CGLDGAGIAKSI 627


>gi|172062808|ref|YP_001810459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ambifaria
           MC40-6]
 gi|229813264|sp|B1Z1G2.1|DXS_BURA4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|171995325|gb|ACB66243.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria MC40-6]
          Length = 634

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/552 (51%), Positives = 362/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +   +   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSPTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA   L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELDA-----TVANMRFVKPVDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  LAQ
Sbjct: 547 AETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVIQ---LGLPDQFIDHGDPAKLLAQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|340785926|ref|YP_004751391.1| 1-deoxy-d-xylulose-5-phosphate synthase [Collimonas fungivorans
           Ter331]
 gi|340551193|gb|AEK60568.1| 1-deoxy-D-xylulose 5-phosphate synthase [Collimonas fungivorans
           Ter331]
          Length = 623

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/564 (49%), Positives = 374/564 (66%), Gaps = 37/564 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN-NVVAVIGDG 59
           MHT+RQ DG+SGF +R+ESEYD FGT HSSTSISA LGMA+    KG  + + +AVIGDG
Sbjct: 88  MHTLRQLDGISGFPRRAESEYDTFGTAHSSTSISAVLGMALAAKTKGETDRHAIAVIGDG 147

Query: 60  AMTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           AMTAG  +EAMNNAG Y D +M+VILNDN  +S+         PPVGAL+  L+RL S +
Sbjct: 148 AMTAGMVFEAMNNAGVYDDINMLVILNDN-DMSIS--------PPVGALNRYLARLMSGQ 198

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
              + + V K +   + GPM +LA + +E+A+GM+  +  T+FEE G  YIGP+DGH+++
Sbjct: 199 FYAQAKNVGKSI---LPGPMRQLAKRFEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLE 253

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+  L+ +KN K  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   
Sbjct: 254 SLIPTLQNLKNLK--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIK-PATVSK 310

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F + L   A  D  ++ I  AM GG+GL+ F +RFP R +DVGIAEQHAVTFAA
Sbjct: 311 MTYTQVFGDWLCDMAAQDDKLIGITPAMSGGSGLDTFAQRFPQRFYDVGIAEQHAVTFAA 370

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DR+GLVGADG TH G++D+ 
Sbjct: 371 GLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRSGLVGADGATHAGNYDMA 430

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ C+PNMVVMA SDE E   M++TA   +  P+  RYPRG GIG  + P    +PL  G
Sbjct: 431 YLRCIPNMVVMAASDENECRQMLSTAYHYNG-PAAVRYPRGAGIGAAIVPELTTLPL--G 487

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG I  +G+ VA+L +G+ +   +AA  LL++     TV + RF KPLD  L+  LA++H
Sbjct: 488 KGEIRRQGQSVAILAFGSMLAPSMAAGELLDA-----TVVNMRFIKPLDVDLVLELAQNH 542

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQA 534
           + L+TVEEGSI GG GS V + LA  G +      +PL+   LPDR+IDHG     LAQ 
Sbjct: 543 DALVTVEEGSIMGGAGSAVAEALAAAGCV------KPLLNLGLPDRFIDHGDVGQLLAQC 596

Query: 535 GLTPSHIAATVFNILGQTREALEI 558
           GL    IAA++    G+ +  L +
Sbjct: 597 GLNAEGIAASIRQRFGKDQPRLVV 620


>gi|402569608|ref|YP_006618952.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
 gi|402250805|gb|AFQ51258.1| deoxyxylulose-5-phosphate synthase [Burkholderia cepacia GG4]
          Length = 634

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 364/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 MATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTIMAASDEDECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L+Q
Sbjct: 547 AETHDCLVTVEEGCVMGGAGSACVEALMESGVIRPVIQ---LGLPDQFIDHGDPAKLLSQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|170699440|ref|ZP_02890484.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
           IOP40-10]
 gi|170135640|gb|EDT03924.1| deoxyxylulose-5-phosphate synthase [Burkholderia ambifaria
           IOP40-10]
          Length = 634

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/552 (51%), Positives = 362/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +   +   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSPTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTIMAASDEDECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA   L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAGEELDA-----TVANMRFVKPVDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  LAQ
Sbjct: 547 AETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVIQ---LGLPDQFIDHGDPAKLLAQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|295700828|ref|YP_003608721.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
 gi|295440041|gb|ADG19210.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1002]
          Length = 650

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 360/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 104 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAIASKLQGDNRMGIAVIGDGA 163

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 164 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 214

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  P+ +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 215 YAAARAGVERVLR-VAPPVLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 271

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 272 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAATPSKK 329

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 330 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 389

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 390 LAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 449

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM VMAPSDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 450 MRCIPNMTVMAPSDENECRQMLYTALQ-QSHPTAVRYPRGAGTGVATIKQMAALPL--GK 506

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  E     G+R+A+L +GT V   LAA+   ++     TVA+ RF KPLD  L+R L
Sbjct: 507 GEVRRETSAPAGKRIAILAFGTMVAPSLAAAEQFDA-----TVANMRFVKPLDTELVRKL 561

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG I GG GS  V+ L   G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 562 AETHDAIVTVEEGCIMGGAGSACVEALLASGVMRPVLQ---LGLPDRFIDHGDPAKLLAA 618

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 619 CGLDAAGIARSI 630


>gi|121534495|ref|ZP_01666318.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
           Nor1]
 gi|121306988|gb|EAX47907.1| deoxyxylulose-5-phosphate synthase [Thermosinus carboxydivorans
           Nor1]
          Length = 628

 Score =  496 bits (1278), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 276/554 (49%), Positives = 373/554 (67%), Gaps = 25/554 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GLSGF KRSESE+D FGTGHSSTSIS+ LGMA+ RDL G K +VVAVIGDG++T
Sbjct: 91  TLRQLGGLSGFPKRSESEHDVFGTGHSSTSISSALGMALARDLLGAKYHVVAVIGDGSLT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            GQAYEA+N+AG++ S++ VILNDN ++S+           VGA+S  L+R+++      
Sbjct: 151 GGQAYEALNHAGHMGSNLTVILNDN-EMSIAKN--------VGAMSQYLARMRTAPTYSR 201

Query: 123 LREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           ++   + + ++I   G  + + A +V +  + ++      +FEELG  YIGP+DGHN+  
Sbjct: 202 VKHDIEYLLRRIPAIGDSVAKTAERVKDSLKYLLVPG--VIFEELGFTYIGPIDGHNIAS 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV +L++ KN +  GPVLIHV+T+KG+GY  AE  ADK+HGV  F   TG+  K+     
Sbjct: 260 LVDVLQQAKNVR--GPVLIHVLTQKGKGYRPAECNADKFHGVGPFCVETGEIIKNGV-NP 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F +AL+  AE D  ++AI AAM  GTGL  F  RFP R FDVGIAE HAVT AAG
Sbjct: 317 TYTAVFGDALVELAEKDDRIIAITAAMPEGTGLKKFAARFPARFFDVGIAEPHAVTMAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A +GL+P  AIYS+F+QRAYDQ+VHDV LQ LPV FA+DRAG+VG DGPTH G FD++F
Sbjct: 377 MATQGLRPVVAIYSTFLQRAYDQIVHDVCLQNLPVVFALDRAGIVGEDGPTHHGVFDLSF 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP-LEVG 418
           +  +PNMV+MAP DE EL HM+ TA  ++  P   RYPRGNG+GV L   +K    LEVG
Sbjct: 437 LRHIPNMVIMAPKDENELRHMLHTALKLNC-PVAIRYPRGNGVGVSL---DKVFSLLEVG 492

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K  I+ +G ++  L  G  V  CL A+A+LE  G++  V +ARF KP D ALIR+LA+  
Sbjct: 493 KAEIVQQGGKLTFLALGAMVGPCLEAAAILEKRGIKAGVVNARFAKPFDAALIRALARDP 552

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
            +L+TVE+  + GGFGS V++++    L    VK   L LPD +++HGS  + LA+ GL 
Sbjct: 553 GMLVTVEDNVLTGGFGSAVLEYINSQNL--QWVKLLRLGLPDTFVEHGSRQELLAKHGLD 610

Query: 538 PSHIAATVFNILGQ 551
            + IAA V N + +
Sbjct: 611 GAGIAAAVQNFINE 624


>gi|407710084|ref|YP_006793948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
           phenoliruptrix BR3459a]
 gi|407238767|gb|AFT88965.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia
           phenoliruptrix BR3459a]
          Length = 635

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/552 (50%), Positives = 360/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 89  MSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAIASKLQGDNRMGIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLR-VAPPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +   S   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAVSPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM+VM PSDE E   M+ TA      P+  RYPRG G GV        +P  VGK
Sbjct: 435 MRCIPNMMVMVPSDENESRQMLYTALQ-QSCPTAVRYPRGAGTGVATVKQMAALP--VGK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD  L+R L
Sbjct: 492 GEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDAELVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L + G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGCVMGGAGSACVEALLESGVMRPVLQ---LGLPDRFIDHGDPAKLLAA 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIAKSI 615


>gi|345864102|ref|ZP_08816307.1| 1-deoxy-D-xylulose-5-phosphate synthase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
 gi|345124820|gb|EGW54695.1| 1-deoxy-D-xylulose-5-phosphate synthase [endosymbiont of Tevnia
           jerichonana (vent Tica)]
          Length = 636

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/537 (51%), Positives = 356/537 (66%), Gaps = 26/537 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G SGF KRSES+YD FGTGHSSTSISA LGMAV    KG    VVAVIGDG+
Sbjct: 100 MAKLRQQGGPSGFPKRSESDYDTFGTGHSSTSISAALGMAVAARRKGESRKVVAVIGDGS 159

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           + AG A+EA+N+AG LD D++V+LNDNK +S+          PVGA S+ LSRL S    
Sbjct: 160 IGAGMAFEALNHAGVLDQDLLVVLNDNK-MSISK--------PVGAFSNHLSRLLSGTLY 210

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K +   +   + EL  + +E+ +GM+     T+FEELG  YIGP+DGH++D L
Sbjct: 211 TGMREGGKSLLSHLPSQVSELMGRWEEHMKGMVLPG--TMFEELGFNYIGPIDGHDLDTL 268

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  +  +K +GP L+HVVT+KGRGY  AE++   YHGV  F+PATG+  K      S
Sbjct: 269 VPTLRNM--SKLSGPCLLHVVTQKGRGYEPAEESPIAYHGVTPFNPATGEMTKGGG-GPS 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L A AE D+ ++AI  AM  G+G+  F RRFP R FDVGIAEQHA+T AAG+
Sbjct: 326 YTQIFGDWLCATAEKDERLLAITPAMCEGSGMVEFARRFPKRYFDVGIAEQHALTLAAGM 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYSSF+QRAYDQ++HDV LQ L V  A+DRAG VGADG TH GSFD+++ 
Sbjct: 386 ACEGAKPVVAIYSSFLQRAYDQLIHDVVLQNLDVTLAVDRAGQVGADGATHAGSFDLSYA 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNM++MAPSDE E   M+ TA      P+  RYPRG G G E+    K  PLE+G+G
Sbjct: 446 RVLPNMLIMAPSDENECSRMLQTAYDYPG-PAMVRYPRGGGTGAEVEQPAK--PLELGQG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+  EG RVALL +G+ +Q+ LAA+  L++     TVAD RF KPLD AL+  LA  HE+
Sbjct: 503 RLRREGCRVALLSFGSLLQTALAAAEQLDA-----TVADMRFVKPLDEALVLDLASRHEL 557

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           L+T+EE  + GG GS V ++LA  G    +V+   L LPDR+I H +   QLA+ GL
Sbjct: 558 LVTLEENQVQGGAGSAVNEYLAHIG---HSVRLLNLGLPDRFIHHATQQQQLAECGL 611


>gi|167583905|ref|ZP_02376293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia ubonensis Bu]
          Length = 634

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 363/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQLDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DR+GLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRSGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM VM PSDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTVMVPSDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPQGKRIAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+VL+T EEG + GG GS  V+ L + G++   ++   L LPDR+IDHG  A  L+Q
Sbjct: 547 AETHDVLVTSEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDRFIDHGDHAKLLSQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|395760865|ref|ZP_10441534.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium lividum
           PAMC 25724]
          Length = 622

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/562 (49%), Positives = 363/562 (64%), Gaps = 29/562 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DG+SGF KR ESEYD FGT HSSTSISA LGMA    +KG   + +AVIGDG+
Sbjct: 88  MHTLRQKDGISGFPKRDESEYDTFGTAHSSTSISAALGMAQAAKIKGDPLHAIAVIGDGS 147

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 148 MTAGMAFEAMNNAGVQEDVNLLVILNDN-DMSIS--------PPVGALNRHLARLMSGQF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V   + GP+ ELA + +E+A+GM+  +  T+FEE G  YIGP+DGH++D 
Sbjct: 199 YAAAKNVGKSV---LPGPVLELAKRFEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLDS 253

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  K  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++    
Sbjct: 254 LIPTLQNIKQLK--GPQFLHVVTKKGQGYKLAEAQPILYHGTGKFNPAEGIKPATAPAKM 311

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F   L   A  DK +V I  AM  G+G+  F ++FP R FDVGIAEQH+VTF AG
Sbjct: 312 TYTEVFGNWLCDMATHDKRLVGITPAMREGSGMVKFEQQFPNRYFDVGIAEQHSVTFGAG 371

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 372 LACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDMAF 431

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M+ T       P+  RYPRG G GV + P    I  E+GK
Sbjct: 432 LRCIPNMVVMAASDENECRQMLTTGYHYPG-PAAIRYPRGAGAGVAIVPELTSI--EIGK 488

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G+R A+L +G+ V   +AA   L++     TVA+ RF KPLD AL++ LA  H+
Sbjct: 489 GEIKRQGKRSAILAFGSMVAPSVAAGEKLDA-----TVANMRFVKPLDVALLKQLAAEHD 543

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG I GG GS V + LA +G++   +    L LPD +IDHG P   L   GL  
Sbjct: 544 YLVTVEEGCIMGGAGSAVAEALAAEGIVKPILM---LGLPDVFIDHGDPVQLLKSVGLDA 600

Query: 539 SHIAATVFNILGQTREALEIMS 560
           + IAA++    G ++  L  +S
Sbjct: 601 AGIAASIEQRFGASQPRLAAVS 622


>gi|77970943|gb|ABB12322.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
          Length = 646

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/550 (50%), Positives = 362/550 (65%), Gaps = 28/550 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 101 MHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 160

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 161 MTAGMAFEAMNNAGVSEDAKVLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 211

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 212 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 268

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 269 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 326

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 327 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 386

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 387 MATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 446

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL---E 416
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL   E
Sbjct: 447 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVPTVKEFTEIPLGKGE 505

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           V +     EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R LA+
Sbjct: 506 VRRQTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVRELAE 560

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           +H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD +IDHG PA  L+Q G
Sbjct: 561 THDYLVTVEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDLFIDHGDPAKLLSQCG 617

Query: 536 LTPSHIAATV 545
           L  + IA ++
Sbjct: 618 LDGAGIAKSI 627


>gi|254253602|ref|ZP_04946919.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
 gi|124898247|gb|EAY70090.1| Deoxyxylulose-5-phosphate synthase [Burkholderia dolosa AUO158]
          Length = 646

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/552 (50%), Positives = 362/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 101 MHTLRQFGGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 160

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 161 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 211

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 212 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 268

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 269 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 326

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 327 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 386

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 387 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 446

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 447 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 503

Query: 420 GRILI-----EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KPLD AL+R L
Sbjct: 504 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPLDAALVREL 558

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+T EEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L+Q
Sbjct: 559 AQTHDYLVTAEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFIDHGDPATLLSQ 615

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 616 CGLDAAGIAKSI 627


>gi|323529244|ref|YP_004231396.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
 gi|323386246|gb|ADX58336.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1001]
          Length = 635

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 281/552 (50%), Positives = 359/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 89  MSTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAIASKLQGDNRMGIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLR-VAPPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +   S   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAVSPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM+VM PSDE E   M+ TA      P+  RYPRG G GV        +P  VGK
Sbjct: 435 MRCIPNMMVMVPSDENESRQMLYTALQ-QSCPTAVRYPRGAGTGVATVKQMAALP--VGK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD  L+R L
Sbjct: 492 GEVRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDAELVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L + G+    ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGCVMGGAGSACVEALLESGVTRPVLQ---LGLPDRFIDHGDPAKLLAA 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIAKSI 615


>gi|307726550|ref|YP_003909763.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
 gi|307587075|gb|ADN60472.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. CCGE1003]
          Length = 635

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 361/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 89  MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAIASKLQGDNRMGIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLR-VAPPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +   S   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAVSPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM+VMA SDE E   M+ TA      P+  RYPRG G GV        +P  +GK
Sbjct: 435 LRCIPNMMVMAASDENECRQMLYTALQ-QSCPTAVRYPRGAGTGVATVKQMAALP--IGK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD  L+R L
Sbjct: 492 GEVRRETSQPAGKRIAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPLDADLVRRL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L + G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGCVMGGAGSACVEALLESGVMRPVLQ---LGLPDRFIDHGDPAKLLAA 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIAKSI 615


>gi|206562766|ref|YP_002233529.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           J2315]
 gi|444361874|ref|ZP_21162452.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           BC7]
 gi|444372696|ref|ZP_21172129.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|229813273|sp|B4EN29.1|DXS_BURCJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|198038806|emb|CAR54768.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           J2315]
 gi|443592944|gb|ELT61708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443597989|gb|ELT66389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           BC7]
          Length = 634

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 363/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L + G++   ++   L LPD +IDHG PA  L+Q
Sbjct: 547 AETHDYVVTVEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDLFIDHGDPAKLLSQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|161702975|ref|YP_372966.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. 383]
 gi|118595497|sp|Q393P4.2|DXS_BURS3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 634

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/550 (50%), Positives = 362/550 (65%), Gaps = 28/550 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQQDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKVLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 MATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL---E 416
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL   E
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVPTVKEFTEIPLGKGE 493

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           V +     EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R LA+
Sbjct: 494 VRRQTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVRELAE 548

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           +H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD +IDHG PA  L+Q G
Sbjct: 549 THDYLVTVEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDLFIDHGDPAKLLSQCG 605

Query: 536 LTPSHIAATV 545
           L  + IA ++
Sbjct: 606 LDGAGIAKSI 615


>gi|421866285|ref|ZP_16297957.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           H111]
 gi|358073868|emb|CCE48835.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia cenocepacia
           H111]
          Length = 634

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 363/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L + G++   ++   L LPD +IDHG PA  L+Q
Sbjct: 547 AETHDYVVTVEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDLFIDHGDPAKLLSQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|170736030|ref|YP_001777290.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           MC0-3]
 gi|119368197|sp|Q1BLY7.2|DXS_BURCA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229813272|sp|B1K3S9.1|DXS_BURCC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169818218|gb|ACA92800.1| deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia MC0-3]
          Length = 634

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 363/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 491

Query: 420 GRILI-----EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD+++DHG  A  LAQ
Sbjct: 547 AETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFVDHGDHAKLLAQ 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDGAGIAKSI 615


>gi|107026830|ref|YP_624341.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           AU 1054]
 gi|116691976|ref|YP_837509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           HI2424]
 gi|123461833|sp|A0AYZ0.1|DXS_BURCH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|105896204|gb|ABF79368.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           AU 1054]
 gi|116649976|gb|ABK10616.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia cenocepacia
           HI2424]
          Length = 646

 Score =  494 bits (1271), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 363/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 101 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 160

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 161 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 211

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 212 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 268

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 269 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 326

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 327 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 386

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 387 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 446

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 447 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 503

Query: 420 GRILI-----EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 504 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVREL 558

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD+++DHG  A  LAQ
Sbjct: 559 AETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFVDHGDHAKLLAQ 615

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 616 CGLDGAGIAKSI 627


>gi|91777310|ref|YP_552518.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
           LB400]
 gi|118595499|sp|Q13RX1.1|DXS_BURXL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91689970|gb|ABE33168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia xenovorans
           LB400]
          Length = 635

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/552 (50%), Positives = 357/552 (64%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMAV   LKG     +AVIGDGA
Sbjct: 89  MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAVASKLKGDNRMGIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLR-VAPPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAATPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  V+ I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVIGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGTGVATIKQMTALPL--GK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G I  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD  L+R L
Sbjct: 492 GEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDADLVRQL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L   G+    ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGCVMGGAGSACVEALLASGVTRPVLQ---LGLPDRFIDHGDPAKLLAA 603

Query: 534 AGLTPSHIAATV 545
            GL    I  ++
Sbjct: 604 CGLDAVGITKSI 615


>gi|313200382|ref|YP_004039040.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
 gi|312439698|gb|ADQ83804.1| deoxyxylulose-5-phosphate synthase [Methylovorus sp. MP688]
          Length = 613

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 262/546 (47%), Positives = 358/546 (65%), Gaps = 27/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R  +G++GF +R+ES YD FGTGHSSTSISA LGMA+    +G +   VA+IGDGA
Sbjct: 89  MADLRMPNGIAGFPRRNESPYDTFGTGHSSTSISAALGMAIAAQQQGSERRAVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG +D++++VILNDN     P          VGAL + L++L S R  
Sbjct: 149 MTAGMAFEALNNAGAMDANLLVILNDNDMSISPN---------VGALHNYLAKLLSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R   + V   +  PM E A + +E+ +GM++    TLFEE G  YIGP+DGH+++ L
Sbjct: 200 ASMRRSGEKVLGVVP-PMLEFAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDIETL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L+ ++  K  GP  +H+VT+KG GY  AE    KYHGV KFDP+ G    +S++ ++
Sbjct: 257 ITTLKNIRKLK--GPQFLHIVTQKGHGYAPAEDNPGKYHGVGKFDPSNGCSVATSSK-KT 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L+  AE D+ ++ I  AM  G+GLN F  +FP R FDVGIAEQHA+TFAAG+
Sbjct: 314 YTQVFSDWLVDMAEQDERLIGITPAMCDGSGLNAFAEKFPKRFFDVGIAEQHALTFAAGM 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+G+KP  AIYS+F+QRAYDQ++HD+ LQ LPV FA+DRAGLVGADGPTH GSFD++FM
Sbjct: 374 ACDGMKPVVAIYSTFLQRAYDQLIHDIALQNLPVVFAIDRAGLVGADGPTHAGSFDLSFM 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM+++APSDE E   M+ TA    D PS  RYPRG G G  +      +P  +GKG
Sbjct: 434 RCIPNMLILAPSDENECRQMLYTAYQ-HDGPSAVRYPRGGGPGAVIKKAMTALP--IGKG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G+ VA+L +G+ +   LAA   L++     TV + RF KPLD ALI  LA SH +
Sbjct: 491 EVRRHGKNVAILAFGSMLTPALAAGEKLDA-----TVVNMRFVKPLDVALIAELAASHSL 545

Query: 481 LITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE + +GG G+ V++ L Q   ++  V    L LPD +IDHG     LA+ GL   
Sbjct: 546 LVTVEENTLLGGAGAAVMEALQQ---INPQVATLSLGLPDTFIDHGVHETMLAECGLNAE 602

Query: 540 HIAATV 545
            I A++
Sbjct: 603 GIIASI 608


>gi|254248779|ref|ZP_04942099.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
 gi|124875280|gb|EAY65270.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
          Length = 646

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 279/552 (50%), Positives = 363/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 101 MHSLRQYDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 160

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  ++  ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 161 MTAGMAFEAMNNAGVSENAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 211

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 212 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 268

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 269 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 326

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 327 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 386

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 387 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 446

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 447 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTEIPL--GK 503

Query: 420 GRILI-----EGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 504 GEVRRRTSQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVREL 558

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPD+++DHG  A  LAQ
Sbjct: 559 AETHDYLVTVEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFVDHGDHAKLLAQ 615

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 616 CGLDGAGIAKSI 627


>gi|385206459|ref|ZP_10033329.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
 gi|385186350|gb|EIF35624.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. Ch1-1]
          Length = 650

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 279/552 (50%), Positives = 358/552 (64%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF KR ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 104 MHTLRQLGGISGFPKRDESEYDTFGTAHSSTSISAALGMAIASKLQGDNRMGIAVIGDGA 163

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 164 MTAGMAFEALNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 214

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V + +  PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 215 YAAARAGVERVLR-VAPPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 271

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 272 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPATTPSKK 329

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  V+ I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 330 TYTQVFGEWLCDAAELDARVIGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 389

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 390 LAAEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 449

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG+G GV        +PL  GK
Sbjct: 450 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGSGTGVATIKQMTALPL--GK 506

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G I  E     G+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD  LIR L
Sbjct: 507 GEIRRETSQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPLDADLIRQL 561

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ L   G+    ++   L LPDR+IDHG PA  LA 
Sbjct: 562 AETHDAIVTVEEGCVMGGAGSACVEALLASGVTRPVLQ---LGLPDRFIDHGDPAKLLAA 618

Query: 534 AGLTPSHIAATV 545
            GL    I  ++
Sbjct: 619 CGLDAVGITKSI 630


>gi|312602677|ref|YP_004022522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
           HKI 454]
 gi|312169991|emb|CBW77003.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
           rhizoxinica HKI 454]
          Length = 655

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 280/552 (50%), Positives = 363/552 (65%), Gaps = 35/552 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +G+SGF +RSES++D FGT HSSTSISA LGMAV   LKG  +  +AVIGDGA
Sbjct: 110 MSTLRQWNGISGFPRRSESQFDAFGTAHSSTSISAALGMAVASQLKGEHHRAIAVIGDGA 169

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG+A+EA+NNAG   D  ++V+LNDN  +S+         PPVGAL+  L +L S R 
Sbjct: 170 MTAGEAFEALNNAGVCEDIPLLVVLNDN-DMSIS--------PPVGALNQYLVKLMSGRF 220

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               +E   GV K +  PM   A K++E+A+GM++ +  TLFEE G  YIGP+DGH++D 
Sbjct: 221 YANAKE---GVRKILPLPMLAFAHKLEEHAKGMVTPA--TLFEEFGFNYIGPIDGHDLDA 275

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  +S++ +
Sbjct: 276 LIPTLQNIRGLR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAASSK-K 332

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+GL  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 333 TYTQVFGEWLCDAAELDPRVVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAGG 392

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+ RAGLVGADG TH G++D+ +
Sbjct: 393 LAAEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALARAGLVGADGATHAGAYDMAY 452

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMAP+DE E   M+ T   I+  PS  RYPRG G GV        +P  VGK
Sbjct: 453 LRCIPNMVVMAPADENECRQMLHTGLQIEG-PSAVRYPRGTGPGVATHKRLSAMP--VGK 509

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G I  +     G RVA+L +G+ +   L A+   ++     TVA+ RF KPLD AL+R L
Sbjct: 510 GEIRRQSQAPAGHRVAILAFGSMLAPSLTAAQEFDA-----TVANMRFVKPLDEALVRQL 564

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A +HE+L+TVEEG++ GG GS V + LA  G L   V    L LPD +IDHG  A QLA 
Sbjct: 565 ADTHELLVTVEEGTLMGGAGSAVAEALACHGKL---VPLMQLGLPDTFIDHGDAAQQLAS 621

Query: 534 AGLTPSHIAATV 545
            GL  + IAA++
Sbjct: 622 VGLDATGIAASI 633


>gi|30249148|ref|NP_841218.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas europaea ATCC
           19718]
 gi|41016959|sp|Q82VD3.1|DXS_NITEU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|30180467|emb|CAD85072.1| Transketolase [Nitrosomonas europaea ATCC 19718]
          Length = 614

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 270/548 (49%), Positives = 361/548 (65%), Gaps = 31/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G++GF +R ESEYD FGT HSSTSISA LGMAV   LKG K + +AVIGDGA
Sbjct: 89  MARLRMQGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVAARLKGVKQHAIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG +D++++VILNDN  +S+         PPVGAL++ L++L S R  
Sbjct: 149 MSAGMAFEALNNAGVMDANLLVILNDN-DMSIS--------PPVGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIG--GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
              R   +   K +G   P+ ELA + +E+ +GM++ S  TLFEE G  YIGP+DGH++D
Sbjct: 200 ATARRAGE---KMLGVVPPVLELAKRAEEHVKGMVTPS--TLFEEFGFNYIGPIDGHDLD 254

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+  L  +K  +  GP  +HVVT KG+GY  AE+    YHGV KF P  G   K SA+ 
Sbjct: 255 ILLTTLNNIK--QLDGPQFLHVVTRKGKGYKQAEEDPILYHGVGKFQPDQGIVSKPSAKL 312

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F + L   A  D  ++ I  AM  G+GL  F + +P R FDVGIAEQHAVTFAA
Sbjct: 313 -AYTQIFGDWLCDMAAKDSRLIGITPAMREGSGLVRFSKEYPDRYFDVGIAEQHAVTFAA 371

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADGPTH GSFD++
Sbjct: 372 GAACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLS 431

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ C+PN+ VM P+DE E   M+ TA  + D P+  RYPRG+G GV++    + IPL  G
Sbjct: 432 YLRCIPNITVMTPADENECRQMLYTAFQL-DTPAAVRYPRGSGPGVQIQQEMQTIPL--G 488

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG I  +G+++ALL +G+ +  CL A   L++     TV + RF KPLD  L+ +LA  H
Sbjct: 489 KGEIRRQGKQIALLAFGSMLTPCLEAGDELDA-----TVVNMRFVKPLDQELVATLAAEH 543

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+T+EE +I GG GS V++ L+    LD  V+   L LPD +ID G PA  L+  GL 
Sbjct: 544 ELLVTIEENTIMGGAGSAVMESLSS---LDKNVRLLQLGLPDSFIDQGDPAHMLSDCGLD 600

Query: 538 PSHIAATV 545
            + I  ++
Sbjct: 601 KAGIIQSI 608


>gi|238024939|ref|YP_002909171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
 gi|237879604|gb|ACR31936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
          Length = 634

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/562 (50%), Positives = 365/562 (64%), Gaps = 33/562 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MATLRQFDGISGFPRRSESVYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  + + ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEHAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSAAPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDMAELDARVVGITPAMREGSGMVEFEKRFPARYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HD+ LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDIALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV  P       L VGK
Sbjct: 435 LRCIPNMTVMAASDEDECRQMLYTAVQ-QPNPTAVRYPRGAGAGV--PTVKAMTALPVGK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       EG+RVA+L +GT V   LAA+  +++     TVA+ RF KP+D  LIR L
Sbjct: 492 GEVRRRSAQPEGKRVAILAFGTMVAPSLAAAEQIDA-----TVANMRFVKPVDAELIREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ L + G++   ++   L LPDR+IDHG PA  L+ 
Sbjct: 547 AETHDYLVTVEEGCVQGGAGSACVEALMESGVIRPVLQ---LGLPDRFIDHGEPAKLLSL 603

Query: 534 AGLTPSHIAATVFN-ILGQTRE 554
            GL  + IA ++    L Q+ E
Sbjct: 604 CGLDAAGIAKSIRERFLSQSAE 625


>gi|312795724|ref|YP_004028646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia rhizoxinica
           HKI 454]
 gi|312167499|emb|CBW74502.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) [Burkholderia
           rhizoxinica HKI 454]
          Length = 648

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/552 (50%), Positives = 362/552 (65%), Gaps = 33/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +R ESEYD FGT HSSTSISA LGMA+   LKG     +AVIGDGA
Sbjct: 100 MSTLRQLGGISGFPRRCESEYDTFGTAHSSTSISAALGMAIASQLKGEDRYAIAVIGDGA 159

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG+A+EA+NNAG   D  ++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 160 MTAGEAFEALNNAGVCEDIPLLVILNDN-DMSIS--------PPVGALNRYLARLMSGKF 210

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               ++  + V +    PM ELA K++E+A+GM++ +  TLFEE G  YIGP+DGH++D 
Sbjct: 211 YATAKKGVERVLRH-APPMLELARKLEEHAKGMVTPA--TLFEEFGFNYIGPIDGHDLDA 267

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  +S++ +
Sbjct: 268 LIPTLQNIRGLR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAASSK-K 324

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+GL  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 325 TYTQVFGEWLCDAAELDPRVVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAGG 384

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ +
Sbjct: 385 LAAEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDMAY 444

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMAP+DE E   M+ T   I+  PS  RYPRG G GV        +P  VGK
Sbjct: 445 LRCIPNMVVMAPADENECRQMLHTGLQIEG-PSAVRYPRGTGPGVATHKRLSAVP--VGK 501

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G I  +     G RVA+L +G+ +   L A+   ++     TVA+ RF KPLD AL+R L
Sbjct: 502 GEIRRQSQAPAGHRVAILAFGSMLAPSLTAAQEFDA-----TVANMRFVKPLDEALVRQL 556

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A +HE+L+TVEEG + GG GS  ++ L   G++   ++   L LPDR+IDHG P   LA 
Sbjct: 557 ADTHELLVTVEEGCVMGGAGSACIESLQAAGIIRPVLQ---LGLPDRFIDHGDPTKLLAA 613

Query: 534 AGLTPSHIAATV 545
            GL  + IA+ +
Sbjct: 614 CGLDAAGIASAI 625


>gi|390577033|ref|ZP_10257073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
 gi|389931011|gb|EIM93099.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia terrae BS001]
          Length = 632

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/552 (49%), Positives = 360/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ  G+SGF KR ES+YD FGT HSSTSISA LGMA+G  L+G     +AVIGDGA
Sbjct: 89  MHSLRQLGGISGFPKRDESQYDTFGTAHSSTSISAALGMAIGSKLRGEDRFAIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V +    P+ +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLRH-APPVLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGTGVATVKQMAALPL--GK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  +     G+R+A+L +GT V   LAA+  L++     TVA+ RF KP+D  L+R L
Sbjct: 492 GEVRRQSTQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPIDADLVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ + + G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGCVMGGAGSACVEAMMESGVIRPVLQ---LGLPDRFIDHGDPAKLLAS 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIAKSI 615


>gi|416995850|ref|ZP_11939109.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
 gi|325518121|gb|EGC97907.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. TJI49]
          Length = 634

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/554 (50%), Positives = 363/554 (65%), Gaps = 36/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDTRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-------ELPPGNKG 412
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV       ELP G KG
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTELPIG-KG 492

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +     EG+R+A+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R
Sbjct: 493 ---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPVDAALVR 544

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA++H+ L+T EEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L
Sbjct: 545 ELAETHDYLVTAEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFIDHGDPAKLL 601

Query: 532 AQAGLTPSHIAATV 545
           +Q GL  + IA ++
Sbjct: 602 SQCGLDGAGIAKSI 615


>gi|119897489|ref|YP_932702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. BH72]
 gi|166198599|sp|A1K4R0.1|DXS_AZOSB RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|119669902|emb|CAL93815.1| probable 1-deoxy-D-xylulose 5-phosphate synthase [Azoarcus sp.
           BH72]
          Length = 619

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/550 (49%), Positives = 353/550 (64%), Gaps = 34/550 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G+SGF +R ESEYD FGT HSSTSISA LGMAV    +G     +AVIGDGA
Sbjct: 91  MSGLRHWGGISGFPRRCESEYDTFGTAHSSTSISAALGMAVAARDRGEDRRAIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG +D++++VILNDN ++S+         PPVGAL+  L+RL S    
Sbjct: 151 MSAGMAFEALNNAGDMDANLLVILNDN-EMSIS--------PPVGALTKILARLMSGSTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R V + V   +  PM ELA KV+EYA+GMI+    TLFEE G +Y GP+DGH++D L
Sbjct: 202 NAARRVGEKVLGTVP-PMAELARKVEEYAKGMIAPG--TLFEEFGFHYYGPIDGHDLDAL 258

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L+ ++  K  GP  +HV+T+KG+GY  AE     YHGV+KFD   G Q   S    +
Sbjct: 259 IPTLQNIRKLK--GPQFLHVITKKGQGYKLAEADPILYHGVSKFDHTAGIQTGKSGGKLT 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L   A  D  +V I  AM  G+GL  F +RFP R +DVGIAEQHA+TFAAGL
Sbjct: 317 YTQVFSDWLCDIAAADPRIVGITPAMREGSGLVEFAQRFPDRYYDVGIAEQHALTFAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HD+ LQ LPV  A+DR GLVGADG TH G+FD++F+
Sbjct: 377 ACEGLKPVVAIYSTFLQRAYDQLIHDIALQNLPVVLAIDRGGLVGADGATHHGAFDLSFL 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
           AC+PN+VVMAP+DE E   M+ TA    D P+  RYPRG G GV   P      L +GKG
Sbjct: 437 ACVPNLVVMAPADENECRQMLYTAVC-HDGPTAVRYPRGGGSGVV--PLEPMTALPIGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I   G R+A+L +G+ +   L     L++     +VA+ RF KPLD ALI  LA +H +
Sbjct: 494 EIRRHGTRIAVLAFGSMLGVALEVGEALDA-----SVANMRFVKPLDEALIAELAANHAL 548

Query: 481 LITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLV----LPDRYIDHGSPADQLAQAG 535
           L+TVEE + IGG GS V +F+        T+  RP V    LPDR+IDHG  A  LA  G
Sbjct: 549 LVTVEENAVIGGAGSEVARFV-------DTLPQRPRVLRLGLPDRFIDHGDQAQLLASVG 601

Query: 536 LTPSHIAATV 545
           L  + I A +
Sbjct: 602 LDKTGILAAI 611


>gi|167842190|ref|ZP_02468874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
 gi|424905504|ref|ZP_18329007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
 gi|390928397|gb|EIP85801.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           MSMB43]
          Length = 634

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/552 (49%), Positives = 360/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MKTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGTGVATVKAFTELPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V   +AA+  L++     TVA+ RF KP+D  L+R L
Sbjct: 492 GEVRRRTSQPDGKRIAILAFGTMVAPSIAAAEALDA-----TVANMRFVKPIDAELVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G++   ++   L LPDR++DHG PA  L+ 
Sbjct: 547 AQTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRPVLQ---LGLPDRFVDHGDPAKLLSM 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDSDGIANSI 615


>gi|186472775|ref|YP_001860117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia phymatum
           STM815]
 gi|229813274|sp|B2JP68.1|DXS_BURP8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|184195107|gb|ACC73071.1| deoxyxylulose-5-phosphate synthase [Burkholderia phymatum STM815]
          Length = 632

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/552 (49%), Positives = 359/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF KR ES YD FGT HSSTSISA LGMA+G  L+G     +AVIGDGA
Sbjct: 89  MSTLRQLGGISGFPKRDESPYDTFGTAHSSTSISAALGMAIGSKLRGDDRFAIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V +    P+ +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLRH-APPVLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG+KP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGMKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 435 MRCIPNMTIMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGTGVATVKQMAALPL--GK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  +     G+R+A+L +GT V   LAA+  L++     TVA+ RF KP+D AL+R L
Sbjct: 492 GEVRRQSTQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPIDAALVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ + + G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAVVTVEEGCVMGGAGSACVEAMMESGVIRPVLQ---LGLPDRFIDHGDPAKLLAS 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIAKSI 615


>gi|420247660|ref|ZP_14751055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
 gi|398070554|gb|EJL61848.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. BT03]
          Length = 632

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 274/552 (49%), Positives = 359/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ  G+SGF KR ES YD FGT HSSTSISA LGMA+G  L+G     +AVIGDGA
Sbjct: 89  MHSLRQLGGISGFPKRDESPYDTFGTAHSSTSISAALGMAIGSKLRGEDAYSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVEDDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V +    P+ +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLRH-APPVLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDSRVVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        +PL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGTGVATVKQMAALPL--GK 491

Query: 420 GRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +  +     G+R+A+L +GT V   LAA+  L++     TVA+ RF KP+D  L+R L
Sbjct: 492 GEVRRQSTQPAGKRIAILAFGTMVAPSLAAAEQLDA-----TVANMRFVKPIDADLVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ ++TVEEG + GG GS  V+ + + G++   ++   L LPDR+IDHG PA  LA 
Sbjct: 547 AETHDAIVTVEEGCVMGGAGSACVEAMMESGVIRPVLQ---LGLPDRFIDHGDPAKLLAS 603

Query: 534 AGLTPSHIAATV 545
            GL  + IA ++
Sbjct: 604 CGLDAAGIAKSI 615


>gi|253998308|ref|YP_003050371.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
           SIP3-4]
 gi|253984987|gb|ACT49844.1| deoxyxylulose-5-phosphate synthase [Methylovorus glucosetrophus
           SIP3-4]
          Length = 613

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/546 (47%), Positives = 356/546 (65%), Gaps = 27/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R  +G++GF +R+ES YD FGTGHSSTSISA LGMA+    +G +   VA+IGDGA
Sbjct: 89  MADLRMPNGIAGFPRRNESPYDTFGTGHSSTSISAALGMAIAAQQQGSERRAVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG +D++++VILNDN     P          VGAL + L++L S R  
Sbjct: 149 MTAGMAFEALNNAGAMDANLLVILNDNDMSISPN---------VGALHNYLAKLLSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R   + V   +  PM E A + +E+ +GM++    TLFEE G  YIGP+DGH+++ L
Sbjct: 200 ASMRRSGEKVLGVVP-PMLEFAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDIETL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L+ ++  K  GP  +H+VT+KG GY  AE    KYHGV KFDP+ G    +S++ ++
Sbjct: 257 ITTLKNIRKLK--GPQFLHIVTQKGHGYAPAEDNPGKYHGVGKFDPSNGCSVATSSK-KT 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L+  AE D+ ++ I  AM  G+GLN F  +FP R FDVGIAEQHA+TFAAG+
Sbjct: 314 YTQVFSDWLVDMAEQDERLIGITPAMCDGSGLNAFAEKFPKRFFDVGIAEQHALTFAAGM 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+G+KP  AIYS+F+QRAYDQ++HD+ LQ LPV FA+DRAGLVGADGPTH GSFD++FM
Sbjct: 374 ACDGMKPVVAIYSTFLQRAYDQLIHDIALQNLPVVFAIDRAGLVGADGPTHAGSFDLSFM 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM+++ PSDE E   M+ TA    D PS  RYPRG G G  +      +P  +GKG
Sbjct: 434 RCIPNMLILTPSDENECRQMLYTAYQ-HDGPSAVRYPRGGGPGAVIEKVMTALP--IGKG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G+ VA+L +G+ +   L A   L++     TV + RF KPLD ALI  LA SH +
Sbjct: 491 EVRRHGKNVAILAFGSMLTPALVAGEKLDA-----TVVNMRFVKPLDVALIAELAASHSL 545

Query: 481 LITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE + +GG G+ V++ L Q   ++  V    L LPD +IDHG     LA+ GL   
Sbjct: 546 LVTVEENTLLGGAGAAVMEALQQ---INPQVATLSLGLPDTFIDHGVHETMLAECGLNAE 602

Query: 540 HIAATV 545
            I A++
Sbjct: 603 GIIASI 608


>gi|226941242|ref|YP_002796316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Laribacter hongkongensis
           HLHK9]
 gi|254782077|sp|C1DAW8.1|DXS_LARHH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|226716169|gb|ACO75307.1| Dxs [Laribacter hongkongensis HLHK9]
          Length = 622

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 278/548 (50%), Positives = 356/548 (64%), Gaps = 30/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ  GL+GF KR ESEYD FG GHSSTSI A LGMAV     G    VVA+IGDGA
Sbjct: 91  MHTMRQKGGLAGFPKRDESEYDTFGVGHSSTSIGAALGMAVAARQTGSDRRVVAIIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EA+NNAG  D+D++VILNDN     P          VGAL+   +RL S R  
Sbjct: 151 MTAGQAFEALNNAGDSDTDLLVILNDNDMSISPN---------VGALNHYFTRLMSGRFY 201

Query: 121 RELREVAKGVTKQIG--GPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
             ++    G  + +G   P+ +LA K +E  +G+++ +  TLFEE G  Y+GPVDGH++ 
Sbjct: 202 ATMK---SGTNRVLGMAPPLQKLAHKAEEQVKGLLTPA--TLFEEFGFNYLGPVDGHDLG 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            LV  L+ ++  K  GP  +HVVT+KG GY  AEK    YHGV+KF P  G   KS +  
Sbjct: 257 VLVNTLQNIRQLK--GPQFLHVVTKKGHGYKLAEKDPISYHGVSKFSPENGLVSKSGSSK 314

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
             YT  F + L   A  D+ +V I  AM  G+G+  F + +P R FDVGIAEQHAVTFAA
Sbjct: 315 PGYTQVFGDWLCDMAAQDERLVGITPAMREGSGMVRFEKEYPDRYFDVGIAEQHAVTFAA 374

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+AC+GLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADGPTH G+FD++
Sbjct: 375 GMACDGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGPTHAGAFDLS 434

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ C+PNMVVMAPSDE E   ++ T A + D P+  RYPRG G G E       +PL  G
Sbjct: 435 YLRCIPNMVVMAPSDENECRQLLYT-AFLHDGPTAVRYPRGTGPGCEPVAAMTALPL--G 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           +G +  +G+ +A+L +G+ V   LAA+  L++     +VAD RF KPLD ALIR LA SH
Sbjct: 492 QGTLRRQGKGIAILAFGSMVHPALAAADQLDA-----SVADMRFVKPLDTALIRQLAASH 546

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+TVEE  + GG GS V++ LA  G+   TV    L LPD Y++HG PA  LA  GL 
Sbjct: 547 ELLVTVEENVVMGGTGSAVLETLAAAGI---TVPVLNLGLPDHYVEHGDPALLLADCGLD 603

Query: 538 PSHIAATV 545
            + I  +V
Sbjct: 604 TAGIVRSV 611


>gi|386827785|ref|ZP_10114892.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
 gi|386428669|gb|EIJ42497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Beggiatoa alba B18LD]
          Length = 638

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/547 (48%), Positives = 352/547 (64%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  GLSGF KR+ESEYD FG GHSSTSISA LGMA+   L G    V+AVIGDGA
Sbjct: 95  MHTIRQPHGLSGFPKRTESEYDTFGVGHSSTSISAALGMAIASKLAGINRKVMAVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPP-VGALSSALSRLQSNRP 119
           +TAG A+EA+ +AG +D+D++VILNDN          D  I P VG LS+ L+++ S+R 
Sbjct: 155 LTAGMAFEALEHAGDVDADLLVILNDN----------DMSISPNVGGLSNYLAKILSSRF 204

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
              +R+ +K +  +I   M ELA + +E+ +GM+     TLFEELG  YIGPVDGH++  
Sbjct: 205 YASVRQGSKQLLHRIP-TMRELARRAEEHVKGMVIPG--TLFEELGFNYIGPVDGHDLSA 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L  +K  K  GP  +HV+T+KG+GYP AE     YHGV  FDP TGK  K SA   
Sbjct: 262 LIPTLRNMKALK--GPQFLHVITQKGKGYPIAEDNPCTYHGVTAFDPKTGKMAKKSASAP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F + L   A  D  ++ I  AM  G+GL  F  +FP R FDV IAEQH+VT AAG
Sbjct: 320 TYTQIFGQWLCDMAAQDDKLIGITPAMREGSGLVEFSEKFPERYFDVSIAEQHSVTLAAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G+FD+ F
Sbjct: 380 LACEGYKPVVAIYSTFLQRAYDQLLHDVALQNLPVLFAIDRAGLVGADGATHAGTFDIAF 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNMV+M P+DE E   M+ T       P   RYPRGNGIG+ +      +P  +GK
Sbjct: 440 MRCIPNMVIMTPADENECRQMLTTGFLHRAAPCAVRYPRGNGIGIRVDQALTTLP--IGK 497

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
             +  +G RVALL +GT +Q+ L A+  L++     TV + RF KPLD+ ++ ++A+ H+
Sbjct: 498 AELRRQGHRVALLVFGTLLQTALEAAEQLDA-----TVINMRFVKPLDNEMVLNMAQQHD 552

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +++T+E+  I GG GS V ++L     +   V    L LPD +++HG  +  LA  GL  
Sbjct: 553 LIVTIEDSCIMGGAGSAVSEYLHTQAQV---VPVLQLGLPDEFLEHGIQSQMLADCGLDV 609

Query: 539 SHIAATV 545
           + I  +V
Sbjct: 610 AGIVRSV 616


>gi|253995977|ref|YP_003048041.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
 gi|253982656|gb|ACT47514.1| deoxyxylulose-5-phosphate synthase [Methylotenera mobilis JLW8]
          Length = 617

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/551 (47%), Positives = 364/551 (66%), Gaps = 25/551 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R+  G++GF +R+ES YD FGTGHSSTSISA LGMAV     G +   VA+IGDGA
Sbjct: 89  MQNLRKPQGIAGFPRRNESGYDTFGTGHSSTSISAALGMAVAAQKAGSERRSVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG +D++++V+LNDN  +S+           VGAL++ L++L S+R  
Sbjct: 149 MTAGMAFEALNNAGNMDANLLVVLNDN-DMSISNN--------VGALNNYLAKLLSSRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+  K V   +  PM E A + +E+ +GM++    TLFEE G  YIGP+DGH++D L
Sbjct: 200 GTVRKSGKKVLSALP-PMMEFAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDLDAL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  +K  +  GP  +H+VT+KG+G+  AE   +K+HGV KFDP  G    + A  +S
Sbjct: 257 IDTLHNIK--QLNGPQFLHIVTQKGKGFEPAEANPNKFHGVGKFDPFNGNAISAKA-AKS 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L+  A  D  ++ +  AM  G+GLN F  +FP R +DVGIAEQHA+TFAAG+
Sbjct: 314 YTEVFGDWLVDMAAADHRLIGVTPAMCDGSGLNAFASQFPERYYDVGIAEQHALTFAAGM 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKP  AIYS+F+QRAYDQ++HD+ LQ LPV  A+DRAGLVGADGPTH GSFD+TFM
Sbjct: 374 ACDGLKPVVAIYSTFLQRAYDQLIHDIALQNLPVLLAIDRAGLVGADGPTHAGSFDLTFM 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+M PS+E E   M++T   + +  +  RYPRG+G G  +   N  +P+E+GKG
Sbjct: 434 RCIPNIVIMTPSNENECRQMLST-GFLYNGVAAVRYPRGSGTGATV--NNSLLPIEIGKG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           RI  +GE+VA+L +G+ +   L A+  + +     TVA+ RF KP+DHALI  LA +H  
Sbjct: 491 RIERQGEKVAILAFGSMLAPALEAAEAINA-----TVANMRFVKPIDHALIAQLASTHTA 545

Query: 481 LITVEEGSI-GGFGSHVVQFL-AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +IT+EE  + GG GS V++ L A    L  T+K   L LPD++I+HG     LA  GL  
Sbjct: 546 IITIEENCVMGGAGSAVMESLQAMQHSLSHTIKTLSLGLPDQFIEHGVHETMLADCGLDA 605

Query: 539 SHIAATVFNIL 549
             IA+ +  ++
Sbjct: 606 KGIASAIAKLI 616


>gi|221197058|ref|ZP_03570105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2M]
 gi|221203730|ref|ZP_03576748.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2]
 gi|221212348|ref|ZP_03585325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD1]
 gi|421468344|ref|ZP_15916896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC BAA-247]
 gi|421476964|ref|ZP_15924817.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CF2]
 gi|221167447|gb|EED99916.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD1]
 gi|221175896|gb|EEE08325.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2]
 gi|221183612|gb|EEE16012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CGD2M]
 gi|400227279|gb|EJO57286.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           CF2]
 gi|400232199|gb|EJO61835.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC BAA-247]
          Length = 634

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/554 (50%), Positives = 362/554 (65%), Gaps = 36/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-------ELPPGNKG 412
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV       ELP G KG
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTELPIG-KG 492

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +     EG+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD AL+R
Sbjct: 493 ---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPLDAALVR 544

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA++H+ L+T EEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L
Sbjct: 545 ELAETHDFLVTAEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFIDHGDPAKLL 601

Query: 532 AQAGLTPSHIAATV 545
           +  GL  + IA ++
Sbjct: 602 SLCGLDGAGIAKSI 615


>gi|330821214|ref|YP_004350076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
           BSR3]
 gi|327373209|gb|AEA64564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia gladioli
           BSR3]
          Length = 634

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 279/554 (50%), Positives = 360/554 (64%), Gaps = 36/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+   L G     +AVIGDGA
Sbjct: 89  MSSLRQFDGISGFPRRSESVYDTFGTAHSSTSISAALGMALASQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               R    GV K   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++
Sbjct: 200 YAAAR---AGVEKVLSVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDL 254

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           D L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++  
Sbjct: 255 DSLIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPA 312

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
            ++YT  F E L   AE+D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA
Sbjct: 313 KKTYTQVFGEWLCDMAELDARVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFA 372

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
            G+A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+
Sbjct: 373 GGMATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDL 432

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            F+ C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IP  V
Sbjct: 433 AFLRCIPNMTVMAASDEDECRQMLYTAVQ-QPNPTAVRYPRGAGAGVPTVKAMTAIP--V 489

Query: 418 GKGRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           GKG +       EG+RVA+L +GT V   LAA+  L++     TVA+ RF KP+D  L+R
Sbjct: 490 GKGEVRRRSAQPEGKRVAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPIDAELVR 544

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA++H+ L+TVEEG I GG GS  V+ L + G++   ++   L LPDR+IDHG PA  L
Sbjct: 545 ELAQTHDYLVTVEEGCIQGGAGSACVEALMEGGVIRPVLQ---LGLPDRFIDHGDPAKLL 601

Query: 532 AQAGLTPSHIAATV 545
           +  GL  + IA ++
Sbjct: 602 SLCGLDAAGIAKSI 615


>gi|161521356|ref|YP_001584783.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
 gi|160345406|gb|ABX18491.1| deoxyxylulose-5-phosphate synthase [Burkholderia multivorans ATCC
           17616]
          Length = 646

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/554 (50%), Positives = 361/554 (65%), Gaps = 36/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 101 MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 160

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 161 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 211

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 212 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 268

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 269 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 326

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 327 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 386

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 387 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 446

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-------ELPPGNKG 412
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV       ELP G KG
Sbjct: 447 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTELPIG-KG 504

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +     EG+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD AL+R
Sbjct: 505 ---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPLDAALVR 556

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA++H+ L+T EEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L
Sbjct: 557 ELAETHDFLVTAEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFIDHGDPAKLL 613

Query: 532 AQAGLTPSHIAATV 545
           +  GL    IA ++
Sbjct: 614 SLCGLDGVGIAKSI 627


>gi|383757524|ref|YP_005436509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rubrivivax gelatinosus
           IL144]
 gi|381378193|dbj|BAL95010.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Rubrivivax gelatinosus
           IL144]
          Length = 628

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/562 (49%), Positives = 362/562 (64%), Gaps = 33/562 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G++GF +R ESEYD F TGHSSTSISA LGMA+    KG     +AVIGDG+
Sbjct: 89  MHTLRQLGGIAGFPRRDESEYDTFATGHSSTSISAALGMALAAKQKGEDRKAIAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGY----LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           MTAG A+EA+NNAG     +++D++V+LNDN  +S+         PPVGAL+  L+RL S
Sbjct: 149 MTAGMAFEALNNAGVPHAGVNADILVVLNDN-DMSIS--------PPVGALNKHLARLMS 199

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
                  RE AK V K    P+ ELA + +E+A+GM+     T+FEE G  Y+GP+DGH+
Sbjct: 200 GNFYAAAREGAKAVLKA-APPLFELARRFEEHAKGMVVPG--TIFEEFGFNYVGPIDGHD 256

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVA-KFDPATGKQFKSS 235
           +D L+  LE ++N K  GP  +HVVT+KG GY  AE    KYH  + +F+PA G   KSS
Sbjct: 257 LDALIPTLENLRNKK--GPQFLHVVTKKGYGYKMAEADPVKYHAASGRFNPAEGFP-KSS 313

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               ++T  F + L   AE D+ +V I  AM  G+G+  F +RFP R  DVGIAEQHAVT
Sbjct: 314 GGKPTFTQVFGQWLCDMAEADERLVGITPAMREGSGMVEFHKRFPRRYHDVGIAEQHAVT 373

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FAAGLACEGLKP  AIYS+F+QRAYDQ+VHDV LQ LPV FA+DR G+VGADGPTH G +
Sbjct: 374 FAAGLACEGLKPVVAIYSTFLQRAYDQLVHDVALQNLPVVFALDRGGIVGADGPTHAGVY 433

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ F+ C+PN  ++APSDE E    + TA    D+P   RYPRG+G G E+  G      
Sbjct: 434 DIAFIRCIPNCALLAPSDENECRQALTTAYR-RDQPVAVRYPRGSGCGAEIETGLS--EW 490

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E GKG +  EG+R+A+L +GT +   LAA+  L +     TV D RF KP+D AL+  +A
Sbjct: 491 EWGKGVVRREGQRIAILAFGTLLHPALAAAEKLGA-----TVVDMRFVKPMDEALVLEMA 545

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           + HE L+TVEEG + GG GS V++ LA  G    T     L +PDR+++HG PA  L+  
Sbjct: 546 RRHEALVTVEEGCVMGGAGSAVLECLAAAG---ATTPVLQLGIPDRFVEHGDPAKLLSML 602

Query: 535 GLTPSHIAATVFNILGQTREAL 556
           GL  + I A++    G +R AL
Sbjct: 603 GLDAAGIEASIRKRFG-SRPAL 623


>gi|399018342|ref|ZP_10720522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
 gi|398101587|gb|EJL91799.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. CF444]
          Length = 620

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/562 (49%), Positives = 362/562 (64%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +R+ESEYD FGT HSSTSISA LGMA+    KG   + +AVIGDGA
Sbjct: 86  MSTLRQFDGISGFPRRAESEYDTFGTAHSSTSISAALGMALAAKTKGEDRHAIAVIGDGA 145

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 146 MTAGMAFEAMNNAGICEDVNLLVILNDN-DMSIS--------PPVGALNRYLARLMSGQF 196

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             + + V K +   +  PM ELA +++E+A+GMI  +  T+FEE G  YIGP+DGH++D 
Sbjct: 197 YAKAKNVGKSM---LPAPMLELAKRLEEHAKGMIVPA--TMFEEFGFNYIGPIDGHDLDS 251

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +KN K  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++A   
Sbjct: 252 LIPTLQNLKNLK--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIK-PAAASKL 308

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   A  DK +V I  AM  G+G+  F ++FP R +DVGIAEQHAVTFAAG
Sbjct: 309 TYTQVFGEWLCDMAAQDKTLVGITPAMREGSGMVKFEQKFPDRYYDVGIAEQHAVTFAAG 368

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 369 MACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLAF 428

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M++TA A    P+  RYPRG G G  +      IPL  GK
Sbjct: 429 LRCIPNMVVMAASDENECRQMLSTAFAYKG-PASVRYPRGAGTGAAVEKTLTAIPL--GK 485

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  EG+ +A+L +GT V     A AL   + L  TVA+ RF KPLD ALIR LA SH+
Sbjct: 486 GEVRREGKGIAILAFGTMV-----APALATGDKLNATVANMRFIKPLDVALIRQLAASHD 540

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
            L+TVEEG I G     V     +  +      +P++   LPDR+IDHG     LA  GL
Sbjct: 541 ALVTVEEGCIMGGAGAAVAEALAEAGI-----VKPILHLGLPDRFIDHGDAGQLLASCGL 595

Query: 537 TPSHIAATVFNILGQTREALEI 558
               IAA++    G+ +  L +
Sbjct: 596 DGDGIAASIVQRFGKDQPRLVV 617


>gi|344337405|ref|ZP_08768339.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocapsa marina 5811]
 gi|343802358|gb|EGV20298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocapsa marina 5811]
          Length = 658

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/563 (49%), Positives = 366/563 (65%), Gaps = 31/563 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGLSGF KR ES+YDCFG GHSSTSISA LGMA+    +G + + VAVIGDGA
Sbjct: 103 MLSLRQKDGLSGFPKRCESDYDCFGVGHSSTSISAALGMALAAKQQGEQRDAVAVIGDGA 162

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG A+EA+N+AG +D D++VILNDN ++S+         PPVGA+++ L+RL S +  
Sbjct: 163 LSAGMAFEALNHAGSMDIDLVVILNDN-EMSIS--------PPVGAITNHLARLLSGKIY 213

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             +RE +K  T   G P +  L  + +E+ +GM+  S  TLFEELG  YIGP+DGH+V  
Sbjct: 214 TTMREGSK--TALRGMPQLRHLVGRWEEHMKGMLMPS--TLFEELGFNYIGPIDGHDVHS 269

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           ++  L  +K  +  G   +HVVT+KG GY  AE     YHGV  FD  TG+  K +++  
Sbjct: 270 VIKTLRNIKEMR--GQRFLHVVTQKGHGYEPAEGQPVTYHGVTPFDRRTGELRKGASKGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F   L   AE D  +V I  AM  G+GL +F +RFP R FDVGIAEQHAVT AAG
Sbjct: 328 TYTQIFGSWLCDTAEADPRLVGITPAMCEGSGLTVFSKRFPERFFDVGIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG+KP  AIYSSF+QRAYDQ++HDV LQ L V FA+DR GLVGADG TH GSFD++F
Sbjct: 388 MACEGVKPVVAIYSSFLQRAYDQLIHDVCLQGLDVTFAVDRGGLVGADGATHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
              LP +V+MAP+ E E   M+ TA      P+  RYPRGNG GV + P    +P  +G+
Sbjct: 448 GRPLPKLVIMAPAHENECRAMLRTAYEYPG-PAMVRYPRGNGPGVAIDPETPALP--IGR 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I+ +G RVALL +G+ V     A+  L++     TVA+ RF KPLD  LIR+LA+ H+
Sbjct: 505 GEIVRQGSRVALLAFGSMVTPASKAAEPLDA-----TVANMRFVKPLDGPLIRALAEGHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE S+ GG GS V ++LA +G+    +    L LPDRYIDH   A QLA  GL  
Sbjct: 560 LLVTVEENSVAGGAGSGVAEWLAAEGI---DIPCVHLGLPDRYIDHAEHAQQLAACGLDA 616

Query: 539 SHIAATVFNILG---QTREALEI 558
             I A+V +  G     R+ LE+
Sbjct: 617 EGIRASVRDAYGLRFPDRDLLEV 639


>gi|34498147|ref|NP_902362.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chromobacterium violaceum
           ATCC 12472]
 gi|41016944|sp|Q7NUK5.1|DXS_CHRVO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|34104002|gb|AAQ60362.1| 1-deoxy-D-xylulose 5-phosphate synthase [Chromobacterium violaceum
           ATCC 12472]
          Length = 616

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 274/547 (50%), Positives = 357/547 (65%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ +GL+GF KR ESEYD FG GHSSTSI A LGMAV     G     VA+IGDGA
Sbjct: 89  MHTMRQHNGLAGFPKREESEYDTFGVGHSSTSIGAALGMAVAAKTLGVDRKSVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EA+NNAG +D+D++VILNDN     P          VGAL++ L++L S R  
Sbjct: 149 MTAGQAFEALNNAGAMDTDLLVILNDNDMSISPN---------VGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +  V   I  P+ E+A+KV+E+ +G  +    TLFEE G  YIGP+DGH+VD L
Sbjct: 200 AAMREGSSKVLG-IAPPLKEIASKVEEHVKGFFTPG--TLFEEFGFNYIGPIDGHDVDVL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG-KQFKSSARTQ 239
           V  L+ +++ K  GP  +H+VT+KG+GY  AE    KYHGV KFDPA G    K  A   
Sbjct: 257 VDTLKNIRSLK--GPQFLHIVTKKGQGYKLAENDPVKYHGVTKFDPANGLASGKGGAGKP 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F + L   A++DK +V I  AM  G+G+  F +  P R +DV IAEQHAVTFA G
Sbjct: 315 QYTQVFGDWLCDMAKLDKRLVGITPAMREGSGMVRFEKEHPDRYYDVAIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +AC+GLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADGPTH G+FD+++
Sbjct: 375 MACDGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVMFALDRAGLVGADGPTHAGAFDLSY 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMAPSDE E   ++ TA  + D P+  RYPRG G G E+      +P  +GK
Sbjct: 435 LRCIPNMTVMAPSDENECRQLLYTAFQL-DTPTAVRYPRGTGPGAEIQQQMAALP--IGK 491

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +   G++VA+L +G+ V   LAA+  L++     TVAD RF KPLD  LIR LA++HE
Sbjct: 492 GVVRRRGKQVAILAFGSMVHPALAAAEALDA-----TVADMRFVKPLDAELIRKLAQTHE 546

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +++TVEE  + GG GS   + L   GL   T+    L LPD Y++HG PA  L+  GL  
Sbjct: 547 LIVTVEENVVMGGAGSGCGEALQAMGLAVPTLH---LGLPDDYVEHGDPALLLSLCGLDA 603

Query: 539 SHIAATV 545
           + I  ++
Sbjct: 604 AGIEKSI 610


>gi|189352477|ref|YP_001948104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
 gi|189336499|dbj|BAG45568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia multivorans
           ATCC 17616]
          Length = 634

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/554 (50%), Positives = 361/554 (65%), Gaps = 36/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MPTLRQLGGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSQLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIRELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L  EAE D  VV I  AM  G+G+  F +RF  R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDEAERDSRVVGITPAMREGSGMVEFEKRFKDRYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGV-------ELPPGNKG 412
           M C+PNM +MA SDE E   M+ TA      P+  RYPRG G GV       ELP G KG
Sbjct: 435 MRCIPNMTIMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKEFTELPIG-KG 492

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +     EG+R+A+L +GT V   LAA+  L++     TVA+ RF KPLD AL+R
Sbjct: 493 ---EVRRRTSQPEGKRIAILAFGTMVAPSLAAAEELDA-----TVANMRFVKPLDAALVR 544

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA++H+ L+T EEG + GG GS  V+ L + G++   ++   L LPD++IDHG PA  L
Sbjct: 545 ELAETHDFLVTAEEGCVMGGAGSACVEALMESGVIRPVLQ---LGLPDQFIDHGDPAKLL 601

Query: 532 AQAGLTPSHIAATV 545
           +  GL    IA ++
Sbjct: 602 SLCGLDGVGIAKSI 615


>gi|372490115|ref|YP_005029680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
 gi|359356668|gb|AEV27839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechlorosoma suillum PS]
          Length = 618

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 280/557 (50%), Positives = 353/557 (63%), Gaps = 33/557 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   GLSGF KR ES YD FG GHSSTSISA LGMA+    KG     VA+IGDGA
Sbjct: 92  MAKLRMHGGLSGFPKRCESAYDTFGVGHSSTSISAALGMALAAKQKGENRKAVAIIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG  D++M+VILNDN  +S+         PPVGAL+  L+RL S    
Sbjct: 152 MSAGMAFEALNNAGVADANMLVILNDN-DMSIS--------PPVGALNKYLARLLSGGLY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R   + V   +  P+ ELA + +E+ +GM++    TLFEELG  YIGP+DGH++D L
Sbjct: 203 SAARRAGEKVLG-VAPPLLELAKRAEEHVKGMLTPG--TLFEELGFNYIGPIDGHDLDAL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ +K  K  GP  +HV+T+KG+GY  AE     YHGV+KF P  G Q        +
Sbjct: 260 VPTLQNLKGLK--GPQFLHVITKKGQGYKLAEANPVLYHGVSKFQPEVGIQSGKGGGKLT 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L   A  +  +V I  AMG G+GL  F   +P R FDVGIAEQHAVTFAAGL
Sbjct: 318 YTQVFSDWLCDMAAAEPRLVGITPAMGEGSGLVRFAELYPERYFDVGIAEQHAVTFAAGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ+VHDV LQ LPV FA+DR GLVGADG TH G+FD++FM
Sbjct: 378 ACEGLKPVVAIYSTFLQRGYDQLVHDVALQNLPVVFAIDRGGLVGADGATHHGAFDLSFM 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+MAP+DE E   M+ TA  ID  PS  RYPRG G GV   P      L VGKG
Sbjct: 438 TCIPNLVIMAPADEDECRKMLTTAMGIDG-PSAVRYPRGGGSGVT--PETALTALPVGKG 494

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +G+ VALL +G+ VQ+ L A   L++     +VA+ RF KPLD  L+  LA++HE+
Sbjct: 495 EIRRQGKGVALLAFGSMVQAALGAGDALDA-----SVANMRFVKPLDRELLAELARNHEL 549

Query: 481 LITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L++VEE + IGG GS V + L + GL   TV    L LPD +IDHG     LA+ GL   
Sbjct: 550 LVSVEENALIGGAGSEVARALEEMGL---TVPLLRLGLPDHFIDHGDQNLLLAELGL--- 603

Query: 540 HIAATVFNILGQTREAL 556
                V  I+ Q R+ L
Sbjct: 604 ----DVDGIVRQVRQRL 616


>gi|221065760|ref|ZP_03541865.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
 gi|220710783|gb|EED66151.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni KF-1]
          Length = 622

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/546 (47%), Positives = 358/546 (65%), Gaps = 24/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    KG     +AVIGDGA
Sbjct: 93  MATLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NN G  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNGGVHDANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R+V K V KQ+  P+ ELA ++++ A+GM+  +  T+FE+ G  YIGP+DGH++D L
Sbjct: 204 AKARDVGKSVLKQVP-PLLELAKRLEQQAKGMVVPA--TMFEQFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++   Q+
Sbjct: 261 IPTLENIKGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKSATPAKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F   L   A  D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G+
Sbjct: 319 FTQVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++ TA    D P C RYPRG G+G+      +G+P   G+ 
Sbjct: 439 RCIPNMSMACPADERETRQLLTTAYE-QDHPVCVRYPRGAGVGMTPLESLEGLPFGKGEM 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R      +VA+L +GT +   L A+  L++     +VA+ R+ KPLD AL+  +A  HE+
Sbjct: 498 RRESSSRKVAILAFGTLLYPALQAAEALDA-----SVANMRWAKPLDEALLLKIAAEHEL 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EEG + GG GS V++ LA +GL    ++   L LPD +I+HG PA  LA  GL  +
Sbjct: 553 IVTLEEGCVMGGAGSAVMECLAANGLSRSVLQ---LGLPDAFIEHGDPAKLLALQGLDAA 609

Query: 540 HIAATV 545
            I A++
Sbjct: 610 GIEASI 615


>gi|332524232|ref|ZP_08400458.1| deoxyxylulose-5-phosphate synthase [Rubrivivax benzoatilyticus JA2]
 gi|332107567|gb|EGJ08791.1| deoxyxylulose-5-phosphate synthase [Rubrivivax benzoatilyticus JA2]
          Length = 628

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/551 (49%), Positives = 357/551 (64%), Gaps = 32/551 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G++GF +R ESEYD F TGHSSTSISA LGMA+    KG     +AVIGDG+
Sbjct: 89  MHTLRQLGGIAGFPRRDESEYDTFATGHSSTSISAALGMALAAKQKGEDRKAIAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGY----LDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           MTAG A+EA+NNAG     +++D++VILNDN  +S+         PPVGAL+  L+RL S
Sbjct: 149 MTAGMAFEALNNAGVPHAGVNADILVILNDN-DMSIS--------PPVGALNKHLARLMS 199

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
                  RE  KGV K    P+ ELA + +E+A+GM+     T+FEE G  Y+GP+DGH+
Sbjct: 200 GNFYAAAREGVKGVLKA-APPLFELARRFEEHAKGMVVPG--TIFEEFGFNYVGPIDGHD 256

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVA-KFDPATGKQFKSS 235
           +D L+  LE ++N K  GP  +HVVT+KG GY  AE    KYH  + +F+PA G   KSS
Sbjct: 257 LDALIPTLENLRNKK--GPQFLHVVTKKGYGYKMAEADPVKYHAASGRFNPAEGFP-KSS 313

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               ++T  F + L   AE D+ +V I  AM  G+G+  F +RFP R  DVGIAEQHAVT
Sbjct: 314 GGKPTFTQVFGQWLCDMAEADERLVGITPAMREGSGMVEFHKRFPRRYHDVGIAEQHAVT 373

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FAAGLACEGLKP  AIYS+F+QRAYDQ+VHDV LQ LPV FA+DRAG+VGADGPTH G +
Sbjct: 374 FAAGLACEGLKPVVAIYSTFLQRAYDQLVHDVALQNLPVVFALDRAGIVGADGPTHAGVY 433

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ F+ C+PN  ++APSDE E    + TA    D+P   RYPRG+G G E+  G      
Sbjct: 434 DIAFIRCIPNCALLAPSDENECRQALTTAYR-RDQPVAVRYPRGSGCGAEIETGLG--EW 490

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E GKG +  EG+R+A+L +GT +   LAA+  L +     TV D RF KP+D AL+  +A
Sbjct: 491 EWGKGVVRREGQRIAILAFGTLLHPALAAAEKLGA-----TVVDMRFVKPMDEALVLEMA 545

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           + HE ++TVEEG + GG GS V++ LA  G+    ++   L +PDR+ +HG P   L+  
Sbjct: 546 RRHEAIVTVEEGCVMGGAGSAVLECLAAAGVTTPVLQ---LGIPDRFTEHGDPNKLLSMM 602

Query: 535 GLTPSHIAATV 545
           GL    I A++
Sbjct: 603 GLDAEGIEASI 613


>gi|83717976|ref|YP_438814.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
 gi|167615333|ref|ZP_02383968.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           Bt4]
 gi|257141898|ref|ZP_05590160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
 gi|118595498|sp|Q2T7N5.1|DXS_BURTA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|83651801|gb|ABC35865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           E264]
          Length = 634

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/552 (50%), Positives = 359/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+RVA+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+R L
Sbjct: 492 GEVRRRTSQPDGKRVAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G +   ++   L LPDR++DHG PA  LA 
Sbjct: 547 AQTHDYLVTVEEGCVMGGAGSACVEAMMEGGAVRPVLQ---LGLPDRFVDHGDPAKLLAM 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDGDGIAKSI 615


>gi|288940188|ref|YP_003442428.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
 gi|288895560|gb|ADC61396.1| deoxyxylulose-5-phosphate synthase [Allochromatium vinosum DSM 180]
          Length = 634

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 273/547 (49%), Positives = 355/547 (64%), Gaps = 28/547 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF KR ESEYD FG GHSSTSISA LGMA+    +G +  V+A+IGDGA
Sbjct: 103 MCTLRQKDGISGFPKRGESEYDTFGVGHSSTSISAALGMALAAKQRGERRTVIAIIGDGA 162

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           + AG A+EA+N+AG +D D++VILNDN ++S+         PPVGA+S+ L+RL S +  
Sbjct: 163 LGAGMAFEALNHAGSMDIDLVVILNDN-EMSIS--------PPVGAISNHLARLLSGKLY 213

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             +RE +K      G P +  L  + +E+ +GM+  S  TLFEELG  YIGPVDGH++D 
Sbjct: 214 TSVREGSKHALA--GMPQLRHLVGRWEEHMKGMLMPS--TLFEELGFNYIGPVDGHDMDG 269

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L  +K+    G  L+H+VT+KGRG+  AE     YHGV  FD  TG+  K+     
Sbjct: 270 LLRTLRNIKDMP--GQRLLHIVTKKGRGFEPAEGQPVIYHGVTPFDRQTGQLLKAKGAGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F   L   A  D  +V I  AM  G+GL  F +RFP R FDVGIAEQHAVT AAG
Sbjct: 328 TYTQIFGGWLHDTAAADPRLVGITPAMCEGSGLTAFSKRFPERYFDVGIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEGLKP  AIYSSF+QRAYDQ+VHDV LQ L V FA+DR GLVGADG TH G FD++F
Sbjct: 388 LACEGLKPVVAIYSSFLQRAYDQLVHDVALQNLDVTFAVDRGGLVGADGATHAGGFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
              +PN+V+M PS+E E   M+ TA   +  P+  RYPRG G GV + P    +P  +G+
Sbjct: 448 CRPIPNLVIMTPSNENECRRMLRTAYEYEG-PALVRYPRGGGPGVAIDPNAPALP--IGR 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I+ EG R+ALL +G  V++ L A+ + ++     TVAD RF KPLD ALI  LA  HE
Sbjct: 505 GEIVREGSRIALLAFGPLVKTALEAAEVFDA-----TVADMRFVKPLDAALILDLAARHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG GS V + L++ G++   +    L LPDRYIDH    +QLA  GL  
Sbjct: 560 ILVTLEENAIAGGAGSGVAELLSEQGVVRRCLH---LGLPDRYIDHAEHHEQLASVGLDA 616

Query: 539 SHIAATV 545
             I A++
Sbjct: 617 PGIIASL 623


>gi|167577163|ref|ZP_02370037.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia thailandensis
           TXDOH]
          Length = 634

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/552 (50%), Positives = 359/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSATPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+RVA+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+R L
Sbjct: 492 GEVRRRTSQPDGKRVAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVREL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G +   ++   L LPDR++DHG PA  LA 
Sbjct: 547 AQTHDYLVTVEEGCVMGGAGSACVEAMMEGGAVRPVLQ---LGLPDRFVDHGDPAKLLAM 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDGDGIAKSI 615


>gi|134298942|ref|YP_001112438.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum reducens MI-1]
 gi|134051642|gb|ABO49613.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum reducens
           MI-1]
          Length = 635

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/548 (48%), Positives = 359/548 (65%), Gaps = 22/548 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GLSGF K  ES +D F TGHSSTSISA LGMA+ RDLKG K++VVAVIGDG++T
Sbjct: 94  TLRQYGGLSGFPKPEESIHDAFATGHSSTSISAALGMALTRDLKGEKHSVVAVIGDGSLT 153

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+EA+N AG+L ++MIV+LNDN ++S+         P VGALS  LSRL+++    +
Sbjct: 154 GGMAFEALNYAGHLKTNMIVVLNDN-EMSIA--------PNVGALSGYLSRLRTDPKYSK 204

Query: 123 LR-EVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + E+A  + K   GP + ++  ++ +  + ++      LFEELG  Y+GPVDGH+   +
Sbjct: 205 GKDEIADLLQKIPHGPKLLKVVDRLKDSVKYLVVPG--MLFEELGFTYLGPVDGHDTKAV 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L++ K    +GPVL+HV+T+KG+GY  AE+  D+YHGV  FD  TG   KS     S
Sbjct: 263 LTMLQQAK--AVSGPVLVHVITKKGKGYLPAEQNPDRYHGVGPFDLETGTVVKSQG-PPS 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F E ++  A+ D  ++ I AAM  GTGLN F + FP R FDVGIAEQHAVT AAG+
Sbjct: 320 YTEVFGETIVKLAKEDDRIIGITAAMPSGTGLNSFAKEFPKRYFDVGIAEQHAVTMAAGM 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G +P  AIYS+F+QRAYDQV+HDV +Q LPV FA+DR GLVG DGPTH G FD++F+
Sbjct: 380 AATGYRPIAAIYSTFLQRAYDQVLHDVCMQNLPVTFALDRGGLVGDDGPTHHGVFDISFL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             +PN+V+M+P DE EL HM+ TA   +  P   RYPRGNGIG+ +    + +P  +GKG
Sbjct: 440 RNIPNLVMMSPKDENELQHMLKTAVTYNG-PVAIRYPRGNGIGISMDEKLQCLP--IGKG 496

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            ++ EG  V LL  G  VQ  L A+  L + G+  TV +AR+ KPLD  LI + A   + 
Sbjct: 497 EVIREGNDVLLLAIGNMVQEALKAAESLSAQGIEATVINARYTKPLDEELILNYAGRIKN 556

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EE  + GGFGS +++     GL D  VK + L LPD +I+HG+     AQ GLT +
Sbjct: 557 IVTIEEHVLAGGFGSSILELFESSGLTD--VKMKRLGLPDEFIEHGTQNQLRAQYGLTSA 614

Query: 540 HIAATVFN 547
            I  TV N
Sbjct: 615 GIVDTVLN 622


>gi|264679658|ref|YP_003279565.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
 gi|262210171|gb|ACY34269.1| deoxyxylulose-5-phosphate synthase [Comamonas testosteroni CNB-2]
          Length = 622

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/546 (47%), Positives = 357/546 (65%), Gaps = 24/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    KG     +AVIGDGA
Sbjct: 93  MGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NN G  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNGGVHDANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R+V K V KQ+  P+ ELA ++++ A+GM+  +  T+FE+ G  YIGP+DGH++D L
Sbjct: 204 AKARDVGKSVLKQVP-PLLELAKRLEQQAKGMVVPA--TMFEQFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++   Q+
Sbjct: 261 IPTLENIKGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKPATPAKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F   L   A  D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G+
Sbjct: 319 FTQVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++ TA    D P C RYPRG G+GV      +G+P   G+ 
Sbjct: 439 RCIPNMSMACPADERETRQLLTTAYE-QDHPVCVRYPRGAGVGVTPLESLEGLPFGKGEM 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R     ++VA+L +G+ +   L A+  L++     +VA+ R+ KPLD  L+  +A  HE+
Sbjct: 498 RRESASKKVAILAFGSLLYPALQAAEALDA-----SVANMRWAKPLDEELLLQIAADHEL 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EEG + GG GS V++ LA  GL    ++   L LPD +I+HG PA  LA  GL  +
Sbjct: 553 IVTLEEGCVMGGAGSAVMESLAAHGLSKSVLQ---LGLPDEFIEHGDPAKLLALQGLDAA 609

Query: 540 HIAATV 545
            I A++
Sbjct: 610 GIEASI 615


>gi|299533200|ref|ZP_07046584.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           S44]
 gi|298718730|gb|EFI59703.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           S44]
          Length = 622

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/546 (47%), Positives = 357/546 (65%), Gaps = 24/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    KG     +AVIGDGA
Sbjct: 93  MGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NN G  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNGGVHDANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R+V K V KQ+  P+ ELA ++++ A+GM+  +  T+FE+ G  YIGP+DGH++D L
Sbjct: 204 AKARDVGKSVLKQVP-PLLELAKRLEQQAKGMVVPA--TMFEQFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++   Q+
Sbjct: 261 IPTLENIKGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKPATPAKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F   L   A  D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G+
Sbjct: 319 FTQVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++ TA    D P C RYPRG G+GV      +G+P   G+ 
Sbjct: 439 RCIPNMSMACPADERETRQLLTTAYE-QDHPVCVRYPRGAGVGVTPLESLEGLPFGKGEM 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R     ++VA+L +G+ +   L A+  L++     +VA+ R+ KPLD  L+  +A  HE+
Sbjct: 498 RRESASKKVAILAFGSLLYPALQAAEALDA-----SVANMRWAKPLDEELLLQIAADHEL 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EEG + GG GS V++ LA  GL    ++   L LPD +I+HG PA  LA  GL  +
Sbjct: 553 IVTLEEGCVMGGAGSAVMESLAAHGLSKSVLQ---LGLPDEFIEHGDPAKLLALQGLDAA 609

Query: 540 HIAATV 545
            I A++
Sbjct: 610 GIEASI 615


>gi|126443346|ref|YP_001063527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           668]
 gi|134278298|ref|ZP_01765012.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           305]
 gi|167915841|ref|ZP_02502932.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           112]
 gi|217422468|ref|ZP_03453971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           576]
 gi|166198605|sp|A3NMF6.1|DXS_BURP6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|126222837|gb|ABN86342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           668]
 gi|134250082|gb|EBA50162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           305]
 gi|217394699|gb|EEC34718.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           576]
          Length = 634

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/552 (49%), Positives = 361/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+++L
Sbjct: 492 GEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQAL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G++   ++   L LPDR++DHG PA  L+ 
Sbjct: 547 ARTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRPVLQ---LGLPDRFVDHGDPAKLLSL 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDGDGIAKSI 615


>gi|237510266|ref|ZP_04522981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           MSHR346]
 gi|235002471|gb|EEP51895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           MSHR346]
          Length = 634

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/552 (49%), Positives = 361/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+++L
Sbjct: 492 GEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQAL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G++   ++   L LPDR++DHG PA  L+ 
Sbjct: 547 ARTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRPVLQ---LGLPDRFVDHGDPAKLLSL 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDGDGIAKSI 615


>gi|394988075|ref|ZP_10380913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
           skB26]
 gi|393792533|dbj|GAB70552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfuricella denitrificans
           skB26]
          Length = 623

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/556 (48%), Positives = 365/556 (65%), Gaps = 30/556 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G++GF KR+ESEYD FG GHSSTSISA LGMAV    +G     VA+IGDGA
Sbjct: 92  MATLRQLGGIAGFPKRAESEYDAFGAGHSSTSISAALGMAVAAQAEGSDRRAVAIIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G A+EA+NNAG +D++++V+LNDN  +S+           VGAL++ L++L S R  
Sbjct: 152 MTGGMAFEALNNAGAMDANLLVVLNDN-DMSISEN--------VGALNNYLAKLMSGRFY 202

Query: 121 RELREVAKGVTKQIGG--PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
             +R   KG  K +G   P+ ELA + +E+ +GM+     TLFEE G  YIGP+DGH++D
Sbjct: 203 SAMR---KGGEKVLGAVPPILELAKRAEEHMKGMVIPG--TLFEEFGFNYIGPIDGHDLD 257

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            LV  L  +K+ +  GP L+H+ T+KG+GY  AE+    YHGVAKF+P  G         
Sbjct: 258 VLVTTLSNLKHLQ--GPQLLHIATQKGKGYKLAEEDPCLYHGVAKFNPEDGVSDAKPGGK 315

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F + L   A  DK +V I  AM  G+G+  F R +P R FDVGIAEQHA+TFAA
Sbjct: 316 LTYTQVFGDWLCDMAAQDKRLVGITPAMCEGSGMVRFAREYPKRYFDVGIAEQHALTFAA 375

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+ACEG+KP  AIYS+F+QRAYDQ++HD+ LQ LP+  A+DRAGLVGADGPTH GSFD++
Sbjct: 376 GIACEGMKPVVAIYSTFLQRAYDQLIHDIALQGLPIVLAIDRAGLVGADGPTHAGSFDLS 435

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+ C+PN++VMAPSDE E   M+ T A + + PS  RYPRG+G+GV +    + +P  +G
Sbjct: 436 FLRCVPNLLVMAPSDENECRQMLYT-AFMHNGPSAVRYPRGSGMGVAIQQEMQALP--IG 492

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  EGE++A+L +G+     + A AL  +  L+ TVA+ RF KPLD  L   LA++H
Sbjct: 493 KGEVRREGEKIAILAFGS-----MLAPALAAAEELKATVANMRFVKPLDEELTLRLAQTH 547

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           ++L+TVEE ++ GG GS V++FL   G+   TV+   L LPDR+++HG P   LA  GL 
Sbjct: 548 DLLVTVEENAVMGGAGSAVLEFLESKGV---TVQVLQLGLPDRFVEHGDPVKLLASCGLD 604

Query: 538 PSHIAATVFNILGQTR 553
              I   V   L  T+
Sbjct: 605 QDGIVRAVQGRLHSTQ 620


>gi|82701370|ref|YP_410936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
           ATCC 25196]
 gi|118595593|sp|Q2YCH7.1|DXS_NITMU RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|82409435|gb|ABB73544.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosospira multiformis
           ATCC 25196]
          Length = 614

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/539 (49%), Positives = 358/539 (66%), Gaps = 31/539 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G++GF +R ESEYD FGT HSSTSISA LGMAV    +G+K +VVAVIGDGA
Sbjct: 89  MSKLRMRGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVASQWEGKKRSVVAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG +D++++VILNDN  +S+          PVGAL++ L+RL S +  
Sbjct: 149 MSAGMAFEALNNAGAMDTNLLVILNDN-DMSISR--------PVGALNNYLARLMSGQFY 199

Query: 121 RELREVAKGVTKQIGGPMH--ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
              R   +   K +G   H  ELA + +E+ +GM++ S  TLFEE G  YIGP+DGH++D
Sbjct: 200 ATARRAGE---KMLGVVPHVLELAKRAEEHVKGMVTPS--TLFEEFGFNYIGPIDGHDLD 254

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            LV+ L  ++N +  GP  +HVVT KG GY  AE     YHGV +F+P  G   K+S + 
Sbjct: 255 VLVSTLNNIRNLR--GPQFLHVVTRKGAGYKAAEDDPILYHGVTRFNPDAGIIPKASVKP 312

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  F + L   A +D+ +V I  AM  G+G+  F   +  R FDVGIAEQHAVTFAA
Sbjct: 313 -SYTQVFGDWLCDMAALDQRLVGITPAMREGSGMVRFSHEYADRYFDVGIAEQHAVTFAA 371

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLAC+GLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADGPTH GSFD+T
Sbjct: 372 GLACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLT 431

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ C+PN+ VMAPSDE E   M+ TA  ++  P+  RYPRG+G GV      + +PL  G
Sbjct: 432 YLRCIPNITVMAPSDENECRQMLYTAFQMNT-PAAVRYPRGSGSGVAQQKEMQMLPL--G 488

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           +G I  EG  +ALL +G+ +Q CL A+  L +     TVA+ RF KPLD  L+ SLA +H
Sbjct: 489 RGEIRREGAEIALLAFGSMLQPCLEAAEELNA-----TVANMRFVKPLDDDLVASLAANH 543

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           E+L+TVEE ++ GG GS V++ L+  G    TV    L LPD ++D G P+  L++ GL
Sbjct: 544 ELLVTVEENTVMGGAGSAVLESLSARGR---TVPVLQLGLPDTFLDQGDPSQMLSECGL 599


>gi|403523639|ref|YP_006659208.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BPC006]
 gi|403078706|gb|AFR20285.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BPC006]
          Length = 651

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/552 (49%), Positives = 361/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 106 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 165

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 166 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 216

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 217 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 273

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 274 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 331

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 332 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 391

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 392 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 451

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 452 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 508

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+++L
Sbjct: 509 GEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQAL 563

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G++   ++   L LPDR++DHG PA  L+ 
Sbjct: 564 ARTHDYLVTVEEGCVMGGAGSACVEAMMESGVVRPVLQ---LGLPDRFVDHGDPAKLLSL 620

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 621 CGLDGDGIAKSI 632


>gi|188586311|ref|YP_001917856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229836068|sp|B2A526.1|DXS_NATTJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|179350998|gb|ACB85268.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 631

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/552 (48%), Positives = 351/552 (63%), Gaps = 24/552 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GLSGF K  ES YD FGTGHSSTSISA LGMA  RDL+G    V+AVIGDGAMT
Sbjct: 91  TLRQFGGLSGFPKPEESRYDAFGTGHSSTSISAALGMAKARDLQGSNEEVLAVIGDGAMT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+EAMN+AG+  ++M VILNDN ++S+ T         VGALSS LSRL+++     
Sbjct: 151 GGMAFEAMNHAGHEQANMTVILNDN-EMSIGTN--------VGALSSYLSRLRTDPKYHR 201

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
           ++E  + + K+I   GG M +   +V D     M+SG    LFEELG  YIGP+DGHN+ 
Sbjct: 202 IKEDVEFLLKRIPAIGGKMMKSVERVKDSMKYLMVSG---MLFEELGFTYIGPIDGHNIP 258

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+ +L   K+    GPVL+HV+T+KG+GY  AEK  DK+HG   F+  TG   K +   
Sbjct: 259 QLMEVLNNAKDK--NGPVLVHVITKKGKGYEPAEKFPDKFHGTGPFEIETGNAPKKAETA 316

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SY+  F + +   A  ++ VVAI AAM  GTGL  F R FP R FDVGIAEQHA+TFAA
Sbjct: 317 PSYSKVFGDTISEIARKNESVVAITAAMKDGTGLTNFAREFPERFFDVGIAEQHAITFAA 376

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA +G KP  AIYS+F+QRAYDQ++HDV +Q  PV FA+DRAG+VG DG TH G +D++
Sbjct: 377 GLARKGFKPVVAIYSTFLQRAYDQIIHDVCMQDNPVIFAIDRAGIVGGDGETHQGLYDLS 436

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++  +PN++VMAP DEAEL  M+ TA  I ++P   RYPRG G GV L      IPL   
Sbjct: 437 YLRSIPNLIVMAPKDEAELQRMLNTAVNI-NKPVAIRYPRGKGEGVTLWENMTPIPLY-- 493

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG  + EG +VA++G G  V   L  + +L+  G+  TV +ARF KPLD + I  +A+ H
Sbjct: 494 KGETIREGSQVAMIGVGKMVPDMLEVADMLKKEGIEPTVFNARFVKPLDESSILEIAQKH 553

Query: 479 EVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E + T EE + +GGFGS V++ L++ GL    +      LPD YI HG  +  L+Q  L 
Sbjct: 554 EYIYTFEENTELGGFGSQVLECLSKHGLAHKLIDR--FCLPDEYIPHGDRSKVLSQYSLH 611

Query: 538 PSHIAATVFNIL 549
              +   + N L
Sbjct: 612 SQELINKILNRL 623


>gi|53716443|ref|YP_105137.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           23344]
 gi|53722783|ref|YP_111768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           K96243]
 gi|76819327|ref|YP_336000.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710b]
 gi|126456504|ref|YP_001076424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106a]
 gi|167820730|ref|ZP_02452410.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           91]
 gi|167829089|ref|ZP_02460560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           9]
 gi|167850566|ref|ZP_02476074.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           B7210]
 gi|167907502|ref|ZP_02494707.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           NCTC 13177]
 gi|226195571|ref|ZP_03791158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242313679|ref|ZP_04812696.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106b]
 gi|254186153|ref|ZP_04892671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254194253|ref|ZP_04900685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           S13]
 gi|254208408|ref|ZP_04914757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
 gi|254263208|ref|ZP_04954073.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710a]
 gi|254301206|ref|ZP_04968650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           406e]
 gi|81606250|sp|Q63JF4.1|DXS_BURPS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|81684641|sp|Q62DU1.1|DXS_BURMA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|119368198|sp|Q3JKA3.1|DXS_BURP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|166198604|sp|A3P7W4.1|DXS_BURP0 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|52213197|emb|CAH39237.1| 1-deoxy-D-xylulose 5-phosphate synthase [Burkholderia pseudomallei
           K96243]
 gi|52422413|gb|AAU45983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           23344]
 gi|76583800|gb|ABA53274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710b]
 gi|126230272|gb|ABN93685.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106a]
 gi|147751095|gb|EDK58163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei JHU]
 gi|157810695|gb|EDO87865.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           406e]
 gi|157933839|gb|EDO89509.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169651004|gb|EDS83697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           S13]
 gi|225932056|gb|EEH28056.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242136918|gb|EES23321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1106b]
 gi|254214210|gb|EET03595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1710a]
          Length = 634

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/552 (49%), Positives = 360/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+++L
Sbjct: 492 GEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQAL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G +   ++   L LPDR++DHG PA  L+ 
Sbjct: 547 ARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRPVLQ---LGLPDRFVDHGDPAKLLSL 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDGDGIAKSI 615


>gi|94311551|ref|YP_584761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus metallidurans
           CH34]
 gi|118595608|sp|Q1LK34.1|DXS_RALME RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|93355403|gb|ABF09492.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Cupriavidus metallidurans CH34]
          Length = 637

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/571 (47%), Positives = 368/571 (64%), Gaps = 36/571 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +R+ESEYD FGT HSSTSISA LGMA+G   +G K   +AVIGDGA
Sbjct: 90  MSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISAALGMALGARTRGEKRVGIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG Y D  M+V+LNDN  +S+         PPVG L+  L+RL S + 
Sbjct: 150 MTAGMAFEAMNNAGVYKDLPMLVVLNDN-DMSIS--------PPVGMLNKHLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ K   +  P+ E A +++E+A+GM+  +  TLFEE G  Y+GP+DGH++
Sbjct: 201 YAATK---KGIEKVLSVAPPVLEFAKRLEEHAKGMVVPA--TLFEEFGFDYVGPIDGHDL 255

Query: 178 DDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++    +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGHGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPSAK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F E L   A  DK ++ +  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PSRKTYTQVFGEWLCDMAAADKRLIGVTPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G +
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ F+ C+PNM+VM P+DE E   ++ TA    D P+  RYPRG G+GV   P    +P 
Sbjct: 436 DIPFLRCIPNMMVMVPADENECRQLLTTAFQ-QDCPTAVRYPRGAGVGVATQPELTALP- 493

Query: 416 EVGKGRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG I  E     G+RVA++ +G+ V   L A+  L++     TVA+ RF KPLD  L
Sbjct: 494 -VGKGEIRREGHARAGQRVAIMAFGSMVHPALTAAEQLDA-----TVANMRFVKPLDVEL 547

Query: 471 IRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           ++ LA +H+ L+TVEEG ++GG GS V++ LA+ G+   T+    L LPD++IDHG PA 
Sbjct: 548 VKQLAANHDFLVTVEEGATMGGAGSAVLEALAEAGIELPTLV---LGLPDKFIDHGDPAH 604

Query: 530 QLAQAGLTPSHIAATVFNILGQTREALEIMS 560
            L+  GL  + I  +V      T + +++ S
Sbjct: 605 LLSLCGLDAAGIERSVRERFSLTAQPVKVAS 635


>gi|167724591|ref|ZP_02407827.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           DM98]
 gi|167743542|ref|ZP_02416316.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           14]
 gi|167899159|ref|ZP_02486560.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           7894]
 gi|167923680|ref|ZP_02510771.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           BCC215]
 gi|254184924|ref|ZP_04891513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1655]
 gi|386865571|ref|YP_006278519.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026b]
 gi|418397014|ref|ZP_12970764.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354a]
 gi|418536792|ref|ZP_13102461.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026a]
 gi|418544103|ref|ZP_13109415.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258a]
 gi|418550944|ref|ZP_13115891.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258b]
 gi|418556611|ref|ZP_13121235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354e]
 gi|184215516|gb|EDU12497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1655]
 gi|385350375|gb|EIF56919.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258b]
 gi|385350772|gb|EIF57294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1258a]
 gi|385351684|gb|EIF58150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026a]
 gi|385366776|gb|EIF72378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354e]
 gi|385369578|gb|EIF74893.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           354a]
 gi|385662699|gb|AFI70121.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia pseudomallei
           1026b]
          Length = 634

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/552 (49%), Positives = 360/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 89  MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+++L
Sbjct: 492 GEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQAL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G +   ++   L LPDR++DHG PA  L+ 
Sbjct: 547 ARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRPVLQ---LGLPDRFVDHGDPAKLLSL 603

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 604 CGLDGDGIAKSI 615


>gi|326317941|ref|YP_004235613.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323374777|gb|ADX47046.1| deoxyxylulose-5-phosphate synthase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 622

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/546 (48%), Positives = 355/546 (65%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    +G     VA+IGDGA
Sbjct: 93  MPTLRQLGGLSGFPQRTESEYDTFGTAHSSTSISAALGMALAARQRGEDRRAVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D+D++VILNDN  +S+         PPVGAL+  L++L S    
Sbjct: 153 MTAGMAFEALNNAGVADADLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGHFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V K +  P+ ELA + ++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AAAKNVGKTVLKPVP-PLLELAKRFEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KFDP+ G    ++   Q+
Sbjct: 261 IPTLENIKGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGITPPATPPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D+ +V I  AM  G+G+  F + FP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGQWLCDMAAQDERLVGITPAMREGSGMVEFEKSFPGRYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   +++TA    D P   RYPRG+G GV   PG +G+P   GKG
Sbjct: 439 RCIPNMSIACPADERECRQLLSTAYE-QDHPVAVRYPRGSGAGVAPLPGLEGLPF--GKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G+R+A+L +GT +   L A+  L++     TVA+ R+ KPLD AL+  +A  H+ 
Sbjct: 496 EVRRAGQRIAILAFGTLLYPALQAAETLDA-----TVANMRWAKPLDTALLLEIAAGHDA 550

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEEG++ GG GS V + L   G+    ++   L LPD +I+HG PA  LA  GL   
Sbjct: 551 LVTVEEGAVLGGAGSAVCEALNAAGIQKPVLQ---LGLPDVFIEHGDPARLLALQGLDAE 607

Query: 540 HIAATV 545
            I  ++
Sbjct: 608 GIVRSI 613


>gi|349575615|ref|ZP_08887526.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
 gi|348012883|gb|EGY51819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria shayeganii 871]
          Length = 627

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/548 (49%), Positives = 355/548 (64%), Gaps = 30/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  GL+GF KR+ESEYD FG GHSSTSI A LGMAV   L G     VAVIGDGA
Sbjct: 91  MHTIRQCGGLAGFPKRAESEYDDFGVGHSSTSIGAALGMAVADRLSGSPRRSVAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSR--LQSNR 118
           MTAGQA+EA+NNAG +D+D++VILNDN+    P          VGAL   L+   ++  R
Sbjct: 151 MTAGQAFEALNNAGAMDTDLLVILNDNEMSISPN---------VGALPKYLASEVVRDMR 201

Query: 119 -PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMI---SGSGSTLFEELGLYYIGPVDG 174
             LR ++  ++ V  ++ G + ++A +V+   R M+    G  ++LF   GL Y GPVDG
Sbjct: 202 GALRSIKHKSEKVLDKLPGAL-DIAQRVENRIRSMVDEVQGGQNSLFNNFGLDYTGPVDG 260

Query: 175 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 234
           H+V  LVA+L E+K  K  GP L+HV+T KG+GYP AE     +H V KF+PA G    +
Sbjct: 261 HDVRKLVAVLREMKQRK--GPQLLHVLTRKGQGYPLAENDPVGFHAVGKFNPAEGPSKPA 318

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           +    SYT  F + L  +A  D  +VAI  AM  G+GL  F ++FP R FDVGIAEQHAV
Sbjct: 319 APAKPSYTQIFGDWLHDQATADPKLVAITPAMREGSGLVAFEQQFPERYFDVGIAEQHAV 378

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFAAGLACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAG+VGADGPTH G+
Sbjct: 379 TFAAGLACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGIVGADGPTHAGA 438

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D++++ C+PNMVV APSDE E   +++T  A+  +P+  RYPRG+G G  +  G   +P
Sbjct: 439 YDLSYLRCIPNMVVAAPSDENECRLLLSTCYAL-KQPAAVRYPRGSGCGAAVTSGLDTVP 497

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           L  GKG +   G   A+L +G+ VQ  L A     +  L LTVAD RF KP+D ALI  L
Sbjct: 498 L--GKGIVRRRGHGTAVLAFGSMVQPALTA-----AETLNLTVADMRFVKPIDEALIIEL 550

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+ HE L+ +EE ++ GG GS V++ LAQ GL   T+    L +PD   +HG PA  L  
Sbjct: 551 AQQHERLVCIEENAVQGGAGSAVLEVLAQHGLCRPTLL---LGIPDVVTEHGDPAVLLDD 607

Query: 534 AGLTPSHI 541
            GL+   I
Sbjct: 608 MGLSAGKI 615


>gi|339484558|ref|YP_004696344.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
 gi|338806703|gb|AEJ02945.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas sp. Is79A3]
          Length = 614

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/552 (48%), Positives = 354/552 (64%), Gaps = 27/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   GL+GF +R ESEYD FGT HSSTSISA LGMAV   L       +A+IGDGA
Sbjct: 89  MSKLRMQGGLAGFPRRDESEYDAFGTAHSSTSISAALGMAVAAQLNKTDRRAIAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG +D++++VILNDN  +S+          PVGAL++ L++L S R  
Sbjct: 149 MSAGMAFEALNNAGVMDANLLVILNDN-DMSISR--------PVGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R   + V   +  PM ELA + +E+ +GM++    TLFEE G  YIGP+DGH++D L
Sbjct: 200 ATARRAGEKVLGVVP-PMLELAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDLDVL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  +K     GP  +HVVT KG GY  AE+    YHGV KFDP  G   KS+ +  +
Sbjct: 257 ITTLNNIK--LLDGPQFLHVVTRKGAGYKVAEEDPILYHGVGKFDPEKGIIPKSAGKP-A 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L   A  D  ++ I  AM  G+GL  F + +P R FDVGIAEQHAVTFAAG 
Sbjct: 314 YTQIFGDWLCDMAAQDSRLIGITPAMREGSGLVRFSQEYPERYFDVGIAEQHAVTFAAGA 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADGPTH GSFD++++
Sbjct: 374 ACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLSYL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM VMAP+DE E   M+ TA  + D P+  RYPRG G GV++    K +P  +G+G
Sbjct: 434 RCIPNMTVMAPADENECRQMLYTAFQL-DTPTAVRYPRGTGSGVQVQKEMKALP--IGRG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +GER+ALL +G+ +  CL A+  L +     TV + RF KPLD  L+ SLA SH++
Sbjct: 491 EIRRQGERIALLAFGSMLAPCLEAAEELNA-----TVINMRFIKPLDDDLVASLAASHDL 545

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE ++ GG GS V + L    +    VK   L LPD +ID G  A  LA  GL+ +
Sbjct: 546 LVTVEENTVMGGAGSAVTESLNSQRI---CVKVLQLGLPDVFIDQGDHAQMLADCGLSKN 602

Query: 540 HIAATVFNILGQ 551
            I  +V ++  +
Sbjct: 603 GIIQSVRSVFSE 614


>gi|430809187|ref|ZP_19436302.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
 gi|429498331|gb|EKZ96841.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus sp. HMR-1]
          Length = 637

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 272/571 (47%), Positives = 368/571 (64%), Gaps = 36/571 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +R+ESEYD FGT HSSTSISA LGMA+G   +G K   +AVIGDGA
Sbjct: 90  MSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISAALGMALGARTRGEKRVGIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG Y D  M+V+LNDN  +S+         PPVG L+  L+RL S + 
Sbjct: 150 MTAGMAFEAMNNAGVYKDLPMLVVLNDN-DMSIS--------PPVGMLNKHLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ K   +  P+ E A +++E+A+GM+  +  TLFEE G  Y+GP+DGH++
Sbjct: 201 YAATK---KGIEKVLSVAPPVLEFAKRLEEHAKGMVVPA--TLFEEFGFDYVGPIDGHDL 255

Query: 178 DDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++    +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGHGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPSAK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F E L   A  DK ++ +  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PSRKTYTQVFGEWLCDMAAADKRLIGVTPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G +
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ F+ C+PNM+VMAP+DE E   ++ TA    D P+  RYPRG G+GV   P    +P 
Sbjct: 436 DIPFLRCIPNMMVMAPADENECRQLLTTAFQ-QDCPTAVRYPRGAGVGVATQPELTALP- 493

Query: 416 EVGKGRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG I  E     G+RVA++ +G+ V   L A+  L++     TVA+ RF KPLD  L
Sbjct: 494 -VGKGEIRREGHARAGQRVAIMAFGSMVHPALTAAEQLDA-----TVANMRFVKPLDVEL 547

Query: 471 IRSLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           ++ LA +H+ L+TVEEG ++GG GS V++ LA+  +   T+    L LPD++IDHG PA 
Sbjct: 548 VKQLAANHDFLVTVEEGATMGGAGSAVLEALAEADIALPTLV---LGLPDKFIDHGDPAH 604

Query: 530 QLAQAGLTPSHIAATVFNILGQTREALEIMS 560
            L+  GL  + I  +V    G   + +++ S
Sbjct: 605 LLSLCGLDAAGIERSVRERFGLAAQPVKVAS 635


>gi|121596455|ref|YP_991107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
 gi|124381982|ref|YP_001025505.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10229]
 gi|126445825|ref|YP_001077568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10247]
 gi|238561513|ref|ZP_00441961.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
           horse 4]
 gi|251767135|ref|ZP_02266099.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           PRL-20]
 gi|254177253|ref|ZP_04883909.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           10399]
 gi|254203075|ref|ZP_04909437.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
 gi|254359404|ref|ZP_04975676.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           2002721280]
 gi|121224253|gb|ABM47784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei SAVP1]
 gi|126238679|gb|ABO01791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10247]
 gi|147746120|gb|EDK53198.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei FMH]
 gi|148028591|gb|EDK86551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           2002721280]
 gi|160698293|gb|EDP88263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei ATCC
           10399]
 gi|238524498|gb|EEP87931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei GB8
           horse 4]
 gi|243063767|gb|EES45953.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei
           PRL-20]
 gi|261826589|gb|ABM99911.2| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia mallei NCTC
           10229]
          Length = 651

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/552 (49%), Positives = 360/552 (65%), Gaps = 32/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G  L G     +AVIGDGA
Sbjct: 106 MKTLRQFDGISGFPRRSESEYDTFGTAHSSTSISAALGMAIGSKLNGDDRFSIAVIGDGA 165

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG   D+ ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 166 MTAGMAFEAMNNAGVSEDAKLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 216

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  P+ ELA K++E+A+GM+  +  TLFEE G  YIGP+DGH++D 
Sbjct: 217 YAAARAGVERVL-SVAPPVLELARKLEEHAKGMVVPA--TLFEEFGFNYIGPIDGHDLDS 273

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 274 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTTPAKK 331

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G
Sbjct: 332 TYTQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAGG 391

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 392 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGAYDLAF 451

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IPL  GK
Sbjct: 452 LRCIPNMTVMAASDENECRQMLHTALQ-QPNPTAVRYPRGAGTGVATVKAFTEIPL--GK 508

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G +       +G+R+A+L +GT V     A +L  ++ L  TVA+ RF KP+D  L+++L
Sbjct: 509 GEVRRRTSQPDGKRIAILAFGTMV-----APSLAAADALDATVANMRFVKPIDAELVQAL 563

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A++H+ L+TVEEG + GG GS  V+ + + G +   ++   L LPDR++DHG PA  L+ 
Sbjct: 564 ARTHDYLVTVEEGCVMGGAGSACVEAMMESGAVRPVLQ---LGLPDRFVDHGDPAKLLSL 620

Query: 534 AGLTPSHIAATV 545
            GL    IA ++
Sbjct: 621 CGLDGDGIAKSI 632


>gi|418531678|ref|ZP_13097589.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           ATCC 11996]
 gi|371451180|gb|EHN64221.1| 1-deoxy-D-xylulose-5-phosphate synthase [Comamonas testosteroni
           ATCC 11996]
          Length = 622

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/546 (47%), Positives = 357/546 (65%), Gaps = 24/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    KG     +AVIGDGA
Sbjct: 93  MGTLRQFGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NN G  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNGGVHDANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R+V K V KQ+  P+ ELA ++++ A+GM+  +  T+FE+ G  YIGP+DGH++D L
Sbjct: 204 AKARDVGKSVLKQVP-PLLELAKRLEQQAKGMVVPA--TMFEQFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++   Q+
Sbjct: 261 IPTLENIKGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKPATPAKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F   L   A  D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA G+
Sbjct: 319 FTQVFGHWLCDMAAKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAGGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   +++TA      P C RYPRG G+GV      +G+P   G+ 
Sbjct: 439 RCIPNMSMACPADERETRQLLSTAYE-QHHPVCVRYPRGAGVGVTPLESLEGLPFGKGEM 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R     ++VA+L +G+ +   L A+  L++     +VA+ R+ KPLD  L+  +A  HE+
Sbjct: 498 RRESASKKVAILAFGSLLYPALQAAEALDA-----SVANMRWAKPLDEELLLQIAAEHEL 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EEG I GG GS V++ LA  GL    ++   L LPD +I+HG PA  LA  GL  +
Sbjct: 553 IVTLEEGCIMGGAGSAVMESLAAHGLSKSVLQ---LGLPDEFIEHGDPAKLLALQGLDAA 609

Query: 540 HIAATV 545
            I A++
Sbjct: 610 GIEASI 615


>gi|404497671|ref|YP_006721777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|418067360|ref|ZP_12704705.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
 gi|118595485|sp|Q39RT4.1|DXS2_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 2; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 2; Short=DXP
           synthase 2; Short=DXPS 2
 gi|78195273|gb|ABB33040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|373558965|gb|EHP85282.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
          Length = 635

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/550 (48%), Positives = 355/550 (64%), Gaps = 24/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT RQ  G+SGF KRSES +D FG GHSSTSISAGLGMA  +DLKG  +  +AVIGDG+
Sbjct: 89  FHTQRQYKGISGFPKRSESPHDAFGAGHSSTSISAGLGMAAAQDLKGSGSRAIAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G AYEA+N AG+L  ++IV+LNDN ++S+           VGA SS +SR  +    
Sbjct: 149 LTGGMAYEALNQAGHLKKNLIVVLNDN-EMSISQN--------VGAFSSFVSRKMTGSDF 199

Query: 121 RELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           R+L++  +G+ + I   G  +   A + +   +G ++     LFE LG  YIGP+ GH++
Sbjct: 200 RKLKKEMQGLLENIPAIGKDILHFARRAENSLKGFLTPG--MLFEALGFDYIGPIPGHDL 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ + E VK  +  GPVL+HV+T KG+GY  AE+    +HGV  FD ATGK       
Sbjct: 258 PQLLEVFENVKGLE--GPVLVHVMTTKGKGYQPAEENPAAFHGVGPFDVATGKTTGGKPG 315

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F   L+  AE D+ ++AI AAM  GTGL  F +RFP R FDVGIAEQHA+TFA
Sbjct: 316 AASYTGVFGATLVKLAEEDEKIIAITAAMPDGTGLTPFAKRFPERFFDVGIAEQHALTFA 375

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA +G +P  AIYS+F+QRAYDQV HDV LQKLPV  A+DR GLVG DGPTH G+FD+
Sbjct: 376 AGLAADGFRPVTAIYSTFLQRAYDQVFHDVCLQKLPVTMALDRGGLVGDDGPTHHGTFDL 435

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +++  LP M +MAP DE EL HM+ T A    RP   RYPRG G G  LP       LE+
Sbjct: 436 SYLRHLPEMTLMAPKDENELQHMLKT-AIYAGRPVALRYPRGAGYG--LPLDQTIQSLEI 492

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           G+G +L EG+ VA++  G+ V     A+ LLE+ G+R TV +ARF KPLD  LI   A+ 
Sbjct: 493 GRGELLTEGDDVAIVAIGSTVYPAQEAAKLLEARGIRATVVNARFVKPLDRELILGAARR 552

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ-AG 535
              ++TVEE ++ GGFGS V++ LA +G+ D  V+ + + +PDR+I+ G P  QL +  G
Sbjct: 553 TGCIVTVEENALQGGFGSAVLELLADEGMTD--VRAKRIGIPDRFIEQG-PQPQLRKDLG 609

Query: 536 LTPSHIAATV 545
           L  + IAATV
Sbjct: 610 LDGAGIAATV 619


>gi|120610695|ref|YP_970373.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
           AAC00-1]
 gi|166198591|sp|A1TNR1.1|DXS_ACIAC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120589159|gb|ABM32599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax citrulli
           AAC00-1]
          Length = 622

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/540 (49%), Positives = 353/540 (65%), Gaps = 32/540 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    +G     VA+IGDGA
Sbjct: 93  MPTLRQLGGLSGFPQRTESEYDTFGTAHSSTSISAALGMAMAARQRGEDRRAVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D++++VILNDN  +S+         PPVGAL+  L++L S    
Sbjct: 153 MTAGMAFEALNNAGVADANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSG--- 200

Query: 121 RELREVAKGVTKQIGGP---MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
            +    AK V K + GP   + ELA + ++ A+GM+  +  TLFE+ G  YIGP+DGH++
Sbjct: 201 -QFYAAAKNVGKTVLGPVPPLLELAKRFEQQAKGMVLPA--TLFEKFGFNYIGPIDGHDL 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           D L+  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KFDP+ G    ++  
Sbjct: 258 DSLIPTLENIKGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPATPP 315

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
            Q++T  F + L   A  D  +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFA
Sbjct: 316 KQTFTQVFGQWLCDMAAQDDRLVGITPAMREGSGMVEFEKRFPGRYYDVGIAEQHAVTFA 375

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AG+ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+
Sbjct: 376 AGMACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDI 435

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            F+ C+PNM +  P+DE E   +++TA A  D P   RYPRG+G GV   PG +G+P   
Sbjct: 436 PFVRCIPNMSIACPADERECRQLLSTAYA-QDHPVAVRYPRGSGAGVAPLPGLEGLPF-- 492

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG +   G+R+A+L +GT +   L A   L++     TVA+ R+ KPLD AL+  +A  
Sbjct: 493 GKGEVRRTGQRIAILAFGTLLYPALQAGETLDA-----TVANMRWAKPLDTALLLEIAAG 547

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           H+ L+TVEEG++ GG GS V + L   G+    ++   L LPD +I+HG PA  LA  GL
Sbjct: 548 HDALVTVEEGAVLGGAGSAVCEALNAAGIQKPVLQ---LGLPDVFIEHGDPARLLALQGL 604


>gi|374367606|ref|ZP_09625667.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
           OR16]
 gi|373100909|gb|EHP41969.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus basilensis
           OR16]
          Length = 636

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/562 (48%), Positives = 358/562 (63%), Gaps = 39/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G    G K   +AVIGDGA
Sbjct: 90  MHSLRQWGGISGFPRRSESEYDTFGTAHSSTSISAALGMALGARTLGEKRVSIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG Y D  ++V+LNDN  +S+         PPVGAL+S L+RL S + 
Sbjct: 150 MTAGMAFEAMNNAGVYKDLPLLVVLNDN-DMSIS--------PPVGALNSHLARLMSGKF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ +   +  P+ E A + +E+A+GM+  +  TLFEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGIERVLSVAPPVLEFAKRFEEHAKGMMVPA--TLFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+PA G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPSTK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F E L   A  D  +VA+  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PARKTYTQVFGEWLCDMAAADPKLVAVTPAMREGSGMVEFEKRFPNRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVLAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ F+ C+PNM+VM P+DE E   ++ TA      P+  RYPRG G GV        +P 
Sbjct: 436 DIAFLRCIPNMMVMTPADENECRQLLTTAYQ-QACPTAVRYPRGAGSGVATEAALTALP- 493

Query: 416 EVGKGRI-----LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG +        G+RVA L +G+ +   L A+  L++     +VA+ RF KPLD AL
Sbjct: 494 -VGKGEMRRTGGARAGQRVAFLAFGSMLHPALGAAEALDA-----SVANMRFVKPLDEAL 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           ++ LA  H+ L+TVEEG + GG GS V++ LA  G+    V    L LPDR++DHG PA 
Sbjct: 548 VKKLASEHDYLVTVEEGCVMGGAGSAVLEALAAAGI---AVPVLQLGLPDRFVDHGDPAF 604

Query: 530 QLAQAGLTPSHIAATV---FNI 548
            LAQ GL    I  +V   FN+
Sbjct: 605 LLAQCGLDAKGIEQSVRERFNL 626


>gi|194290325|ref|YP_002006232.1| 1-deoxy-d-xylulose-5-phosphate synthase [Cupriavidus taiwanensis
           LMG 19424]
 gi|229813270|sp|B3R5H4.1|DXS_CUPTR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|193224160|emb|CAQ70169.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Cupriavidus taiwanensis LMG 19424]
          Length = 638

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 275/561 (49%), Positives = 359/561 (63%), Gaps = 36/561 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G    G+K   VAVIGDGA
Sbjct: 90  MRTLRQWGGISGFPRRSESEYDTFGTAHSSTSISAALGMALGARTLGQKRVSVAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRHLARLLSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ K   +  P+ E A + +E+A+GM+  +  TLFEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGMMVPA--TLFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+PA G +  + 
Sbjct: 256 NSLVPTLQNIRERALEGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPAAK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PARKTYTQVFGDWLCDMAAADKRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM PSDE E   ++ TA    D P+  RYPRG+G G  +       P+
Sbjct: 436 DIAYLRCIPNMMVMTPSDENECRQLLTTAFQ-QDCPTAVRYPRGSGPGAAI--AADLAPV 492

Query: 416 EVGKGRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG +  E     G RV  L +G+ VQ  L A+  L++     TVAD RF KPLD AL
Sbjct: 493 PVGKGVVRREAGARAGHRVGFLAFGSMVQPALGAAEALDA-----TVADMRFVKPLDVAL 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           ++ LA  H+ L+TVEEGS+ GG GS V++ LA+ G+    +    L LPDR++DHG PA 
Sbjct: 548 VKRLAADHDYLVTVEEGSVMGGAGSAVLEALAEAGIDKPVLT---LGLPDRFVDHGDPAF 604

Query: 530 QLAQAGLTPSHIAATVFNILG 550
            L Q GL  + I  +V    G
Sbjct: 605 LLQQCGLDAAGIERSVRERFG 625


>gi|347540555|ref|YP_004847980.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudogulbenkiania sp.
           NH8B]
 gi|345643733|dbj|BAK77566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudogulbenkiania sp.
           NH8B]
          Length = 618

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/548 (49%), Positives = 356/548 (64%), Gaps = 28/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ  GL+GF KR ESEYD FG GHSSTSISA LGMA     +G +   VA+IGDGA
Sbjct: 89  MHTMRQKGGLAGFPKREESEYDTFGVGHSSTSISAALGMAAAAKAQGIERKSVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EA+NNAG +D DM+V+LNDN     P          VGAL++ L++L S R  
Sbjct: 149 MTAGQAFEALNNAGAMDLDMLVVLNDNDMSISPN---------VGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +++ +  V   I  P+ E+A+KV+E+ +GM +    TLFEE G  YIGP+DGH++  L
Sbjct: 200 AAMKQGSSKVLG-IAPPLREIASKVEEHVKGMFTPG--TLFEEFGFNYIGPIDGHDLHVL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ- 239
           V  L+ +K+ K  GP  +H+VT+KG+GY  AE     YHGV KFDPA G     S  ++ 
Sbjct: 257 VDTLKNIKSLK--GPQFLHIVTKKGQGYKLAENDPVAYHGVTKFDPANGLSGGKSGNSKP 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F + +   A+ D  +V I  AM  G+GL  F +  P R FDV IAEQHAVTFAAG
Sbjct: 315 SYTQIFGDWICDMAKHDTRLVGITPAMREGSGLVRFEKEHPDRYFDVAIAEQHAVTFAAG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LAC+G+KP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADGPTH G+FD+++
Sbjct: 375 LACDGMKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGPTHAGAFDISY 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMAPSDE E   M+ TA  + D P+  RYPRG G G  +      +P  +G+
Sbjct: 435 LRCIPNMTVMAPSDENECRQMLYTAFTL-DTPTAVRYPRGTGPGAHIQHEMSALP--IGR 491

Query: 420 GRILIEGE-RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           G I  +G+ RVA+L +G+ V   L A+   ++     TVAD RF KPLD  LI+SLA+SH
Sbjct: 492 GHIRRQGQGRVAILAFGSMVTPALQAAEAFDA-----TVADMRFVKPLDTGLIKSLAESH 546

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+++TVEE  + GG GS  V+ +   G+   T     L LPD Y++HG PA  LA  GL 
Sbjct: 547 ELIVTVEENVVMGGAGSACVEAIEALGI---TAPVLQLGLPDDYVEHGDPALLLADCGLD 603

Query: 538 PSHIAATV 545
              I A++
Sbjct: 604 AKGIEASI 611


>gi|393778038|ref|ZP_10366321.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
 gi|392714924|gb|EIZ02515.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. PBA]
          Length = 642

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/556 (48%), Positives = 352/556 (63%), Gaps = 36/556 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DG+SGF +RSESEYD FGT HSSTSISA LGMA+G   KG     +AVIGDGA
Sbjct: 92  MHTLRQLDGISGFPRRSESEYDTFGTAHSSTSISAALGMALGAKTKGEDRVAIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG Y D  ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 152 MTAGMAFEAMNNAGVYRDVPLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 202

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 203 YAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 257

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT KG+GY  AE     YHG  KFDPA G +  + 
Sbjct: 258 ESLVPTLQNIRELAHAGRGPQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAEGIRPAAK 317

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               +YT  F + L   A  D  +V I  AM  G+G+  F RRFP R +DVGIAEQHAVT
Sbjct: 318 PSRPAYTKVFGDWLCDMAAADARLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQHAVT 377

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 378 FAGGLACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFALDRAGLVGADGATHAGAY 437

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM++M P+DE E   M+ T     D P+  RYPRG G GV +      +P 
Sbjct: 438 DIAYLRCIPNMLIMTPADENECRQMLTTGFR-HDGPASVRYPRGAGPGVAVDAALSALP- 495

Query: 416 EVGKGRI-----LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG +        G+R A+L +G+ +   LAA   L++     TV + RF KPLD  L
Sbjct: 496 -VGKGEVRRTGHAPAGQRTAILAFGSMLHPALAAGEALDA-----TVVNMRFVKPLDVEL 549

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           +R+LA  H+  +TVEEG + GG GS  ++ LA    +D  +    L LPDR++DHG PA 
Sbjct: 550 LRTLAADHDRFVTVEEGCVMGGAGSACLEALAA---MDIALPVLQLGLPDRFVDHGDPAL 606

Query: 530 QLAQAGLTPSHIAATV 545
            LAQ GL    I A++
Sbjct: 607 LLAQCGLDAKGIEASI 622


>gi|224825911|ref|ZP_03699015.1| deoxyxylulose-5-phosphate synthase [Pseudogulbenkiania ferrooxidans
           2002]
 gi|224602135|gb|EEG08314.1| deoxyxylulose-5-phosphate synthase [Pseudogulbenkiania ferrooxidans
           2002]
          Length = 618

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 275/548 (50%), Positives = 357/548 (65%), Gaps = 28/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ  GL+GF KR ESEYD FG GHSSTSISA LGMA     +G +   VA+IGDGA
Sbjct: 89  MHTMRQKGGLAGFPKREESEYDTFGVGHSSTSISAALGMAAAAKAQGIERKSVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EA+NNAG +D DM+VILNDN     P          VGAL++ L++L S R  
Sbjct: 149 MTAGQAFEALNNAGAMDLDMLVILNDNDMSISPN---------VGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +++ +  V   I  P+ E+A+KV+E+ +GM +    TLFEE G  YIGP+DGH++D L
Sbjct: 200 AAMKQGSSKVLG-IAPPLREIASKVEEHVKGMFTPG--TLFEEFGFNYIGPIDGHDLDVL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ- 239
           V  L+ +K+ K  GP  +H+VT+KG+GY  AE     YHGV KFDPA G     S  ++ 
Sbjct: 257 VDTLKNIKSLK--GPQFLHIVTKKGQGYKLAENDPVAYHGVTKFDPANGLSGGKSGSSKP 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F + +   A+ D  +V I  AM  G+GL  F +  P R FDV IAEQHAVTFAAG
Sbjct: 315 SYTQIFGDWICDMAKHDTRLVGITPAMREGSGLVRFEKEHPDRYFDVAIAEQHAVTFAAG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LAC+G+KP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADGPTH G+FD+++
Sbjct: 375 LACDGMKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFAIDRAGLVGADGPTHAGAFDISY 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMAPSDE E   M+ TA  + D P+  RYPRG G G  +      +P  +G+
Sbjct: 435 LRCIPNMTVMAPSDENECRQMLYTAFTL-DTPTAVRYPRGTGPGAHIQHEMSALP--IGR 491

Query: 420 GRILIEGE-RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           G I  +G+ RVA+L +G+ V   L A+   ++     TVAD RF KPLD  LI+SLA+SH
Sbjct: 492 GHIRRQGQGRVAILAFGSMVTPALQAAEAFDA-----TVADMRFVKPLDTGLIKSLAESH 546

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+++TVEE  + GG GS  V+ +   G+   T     L LPD Y++HG PA  LA  GL 
Sbjct: 547 ELIVTVEENVVMGGAGSACVEAIEAQGI---TAPVLQLGLPDDYVEHGDPALLLADCGLD 603

Query: 538 PSHIAATV 545
              I A++
Sbjct: 604 AKGIEASI 611


>gi|187478667|ref|YP_786691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella avium 197N]
 gi|118595495|sp|Q2KZ15.1|DXS_BORA1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|115423253|emb|CAJ49786.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella avium 197N]
          Length = 620

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 275/547 (50%), Positives = 352/547 (64%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G     +AVIGDGA
Sbjct: 90  MATLRQEGGISGFPKRSESEYDDFGTAHSSTSISAALGMAVASRNAGVARQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   D +++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 150 MSAGMAFEAMNNAGVTSDINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + + K V + +  P+ ELA + +E+A+GMI+ +  T+FEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNMGKAVLQHVP-PVLELARRFEEHAKGMITSA--TMFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  G   +HVVT KGRGY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LIPTLQNLKTLQ--GLQFLHVVTRKGRGYKLAEVDPVLYHGPGKFDPAVGIQAAKTPAKR 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F   L  +AE D  +V I  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFGAWLCDQAEADPRLVGITPAMREGSGLVEFEQRFPKRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QR YDQVVHDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 376 LACEGQKPVVAIYSTFLQRGYDQVVHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMV+  PSDE E   +++T  A    P+  RYPRG G G  +  G   +PL  GK
Sbjct: 436 LRCVPNMVIATPSDENETRLLLSTCYAYPG-PASVRYPRGAGCGAAVSAGLDTVPL--GK 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +   G R+A++G+GT V + LAA+  L++     TVAD RF KPLD  L+R LA +HE
Sbjct: 493 GVVRRRGARIAIMGFGTLVPAALAAAEKLDA-----TVADMRFVKPLDVELLRELAATHE 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+T+E+ ++ GG GS V + L   GL   T+    L LPD +IDHG  A  LA  GL  
Sbjct: 548 ALVTLEDAAVMGGAGSAVTEALNMAGL---TLPVLQLGLPDVFIDHGDQAALLAGVGLDA 604

Query: 539 SHIAATV 545
           + I  +V
Sbjct: 605 AGIERSV 611


>gi|398832980|ref|ZP_10591126.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
 gi|398222367|gb|EJN08744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum sp. YR522]
          Length = 636

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 272/560 (48%), Positives = 367/560 (65%), Gaps = 30/560 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG+SGF +R ES+YD FGT HSSTSISA LGMA+    +G   + +AVIGDGA
Sbjct: 102 MSSLRQQDGISGFPRRDESDYDTFGTAHSSTSISAALGMALAARTQGSDRHAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG + D +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 162 MTAGMAFEALNNAGVHDDVNLLVILNDN-DMSIS--------PPVGALNRYLARLMSGKF 212

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             + R+V K V   + GP+ ELA +++E+A+GM+  +  T+FEE G  YIGP+DGH++D 
Sbjct: 213 YAKARDVGKSV---LPGPVLELAKRLEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLDS 267

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  K  GP  +HVVT KG+GY  AE     YHG  KF+P+ G +  +S++  
Sbjct: 268 LIPTLQNLKQLK--GPQFLHVVTRKGQGYKLAEADPVLYHGPGKFNPSEGIKPSTSSKA- 324

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   A  D+  V I  AM  G+G+  F ++FP R +DVGIAEQHAVTFAAG
Sbjct: 325 TYTQVFGEWLCDMAGADQRAVGITPAMREGSGMVAFEKQFPQRYYDVGIAEQHAVTFAAG 384

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG+KP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 385 MACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLAF 444

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M++TA      P+  RYPRG G+G  +    + +PL  G+
Sbjct: 445 LRCIPNMVVMAASDENECRQMLSTAYQYPG-PAAVRYPRGAGVGAVVQKSLETLPL--GR 501

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  +A+L +GT V     A AL   + L  TVA+ RF KPLD  L+R LA  H+
Sbjct: 502 GEVRRQGRGIAILAFGTMV-----APALQAGDKLNATVANMRFVKPLDVDLVRQLAADHD 556

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG I GG G+ V + LA  G++   +    L LPDR+IDHG  A  L Q GL  
Sbjct: 557 ALVTVEEGCIMGGAGAAVSEALAAAGIVKPILH---LGLPDRFIDHGDAAQLLVQCGLDG 613

Query: 539 SHIAATVFNILGQTREALEI 558
           + IAA++    G+ +  L +
Sbjct: 614 AGIAASIVERFGKDQPRLVV 633


>gi|345869245|ref|ZP_08821203.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
           AZ1]
 gi|343923168|gb|EGV33860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodococcus drewsii
           AZ1]
          Length = 649

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 277/548 (50%), Positives = 354/548 (64%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF KR ESEYD FG GHSSTSISA LGMA+    KG +  V+AVIGDGA
Sbjct: 103 MCTLRQKDGVSGFPKRCESEYDAFGVGHSSTSISAALGMALAAKQKGERRTVIAVIGDGA 162

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++AG A+EA+N+AG +D D++VILNDN ++S+         PPVGA+S+ L+RL S +  
Sbjct: 163 LSAGMAFEALNHAGSMDIDLVVILNDN-EMSIS--------PPVGAISNHLARLLSGKLY 213

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             +RE +K  T   G P +  L  + +E+ +GM+  S  TLFEELG  YIGP+DGH++  
Sbjct: 214 TSVREGSK--TALAGMPQLRHLVGRWEEHVKGMLMPS--TLFEELGFNYIGPIDGHDLGS 269

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           +   L  +K     G  L+HVVT+KGRGY  AE     YHGV  FD  TG+  K  +   
Sbjct: 270 VTRTLRNIKGMP--GQRLLHVVTQKGRGYEPAEGQPTTYHGVTPFDRRTGELRKGKSNGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F   L   A+ D  +V I  AM  G+GL  F +RFP R FDVGIAEQHAVT AAG
Sbjct: 328 TYTQIFGGWLCDAADEDPRLVGITPAMCEGSGLTAFSKRFPDRYFDVGIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEGLKP  AIYSSF+QRAYDQ++HDV LQ L V FA+DR GLVGADG TH GSFD++F
Sbjct: 388 MACEGLKPVVAIYSSFLQRAYDQLIHDVALQNLDVTFAVDRGGLVGADGATHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
              +PNMV+MAPS+E E   M+ TA   +  P+  RYPRG G G+ + P    +P  +G+
Sbjct: 448 TRPIPNMVIMAPSNENECRQMLKTAFEYEG-PAMVRYPRGGGPGIAIDPKAPALP--IGR 504

Query: 420 GRILIEGE-RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           G I+ +G   VALL +G+ V   L A+  L +     TVA+ RF KPLD  LI+ LA +H
Sbjct: 505 GEIVRQGAGSVALLAFGSMVTPALKAAETLNA-----TVANMRFVKPLDLDLIQKLADTH 559

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+TVEE +I GG GS V + LA  GL   T +   L LPD YIDH    +QLA  GL 
Sbjct: 560 ELLVTVEENTIAGGAGSAVAEALAGLGL---TPRCIQLGLPDSYIDHAQHGEQLAACGLD 616

Query: 538 PSHIAATV 545
            + I A+V
Sbjct: 617 AAGILASV 624


>gi|255658172|ref|ZP_05403581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM
           20544]
 gi|260849480|gb|EEX69487.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mitsuokella multacida DSM
           20544]
          Length = 629

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/554 (48%), Positives = 364/554 (65%), Gaps = 37/554 (6%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+R+  G++GF  R ES YD FG GH+STSISA LGMA+ RD KG KN V+AVIGDGA+T
Sbjct: 91  TLRKKGGITGFPNRFESAYDAFGVGHASTSISAALGMALARDAKGEKNQVIAVIGDGALT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRL----QSNR 118
            G+++EA+NNAG L + +IVILNDN+       ++D     VGA+S  LSR+    Q  R
Sbjct: 151 GGESFEALNNAGDLGTKLIVILNDNEM------SIDAN---VGAMSEYLSRIRIAPQYAR 201

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARG-MISGSGSTLFEELGLYYIGPVDGHNV 177
             R++  +   +   IG  +++ A+ + +  R  ++ GS   LFEE+G +YIGP+DGHN+
Sbjct: 202 AKRDMGSLLMSIP-HIGDKVYKTASHLKDGVRSVLVPGS---LFEEMGFHYIGPLDGHNI 257

Query: 178 DDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
               A++EEV  +  +  GPVLIH+ T KG+GY  AE+A +K+HGV  FDP+TGK  K +
Sbjct: 258 ----ALMEEVFKSAKEMEGPVLIHIHTVKGKGYQPAEQAPEKFHGVGCFDPSTGKSAKKA 313

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT+ F++ALI  A+   D++AI AAM  GTGL  F + +P R FDVGIAE+HA+T
Sbjct: 314 GCAPSYTSVFSQALIELAKDRPDILAITAAMPSGTGLKAFGKAYPKRFFDVGIAEEHAMT 373

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+A  G+ P  A+YS+F QRAYDQ++HDV LQ LPV   +DRAGLVG DGPTH G F
Sbjct: 374 LAAGMAAGGMHPVIALYSTFAQRAYDQLIHDVCLQNLPVTLCLDRAGLVGEDGPTHHGVF 433

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D++++  +PNM VMAP DE EL HM+ATA AI   P+  RYPRG G+GVEL    +   L
Sbjct: 434 DLSYLRQMPNMCVMAPKDEEELRHMLATAIAIPG-PAAVRYPRGAGLGVELTDSFE--KL 490

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            VGK  +L EG  +A L  GT V+    A+A+L   G+  TV + RF KPLD ALI ++A
Sbjct: 491 SVGKAEVLQEGGSIAFLAVGTMVEQVKEAAAILAEEGIESTVVNMRFIKPLDTALIDAMA 550

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQL 531
           K+ +++IT EE  + GGFGS V ++LA  G      +  PLV   +PDR+I+ G+  + L
Sbjct: 551 KTKKLIITAEENVLAGGFGSAVAEYLADSG------QQVPLVRFGIPDRFIEQGTRKELL 604

Query: 532 AQAGLTPSHIAATV 545
           +  GL P  +A  V
Sbjct: 605 SLCGLQPEQMAECV 618


>gi|114331489|ref|YP_747711.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
 gi|122313705|sp|Q0AFY6.1|DXS_NITEC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114308503|gb|ABI59746.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosomonas eutropha C91]
          Length = 614

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/546 (47%), Positives = 353/546 (64%), Gaps = 27/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G++GF +R ESEYD FGT HSSTSISA LGMAV   +   K + +A+IGDGA
Sbjct: 89  MAHLRMQGGIAGFPRRDESEYDAFGTAHSSTSISAALGMAVAARINKIKQHAIAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG +D+D++VILNDN  +S+         PPVGAL+  L++L S R  
Sbjct: 149 MSAGMAFEALNNAGVMDADLLVILNDN-DMSIS--------PPVGALNHYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R   + +   +  P+ ELA + +E+ +GM++    TLFEE G  YIGP+DGH++D L
Sbjct: 200 ATARRAGERMLGVVP-PVLELAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDLDIL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  +K  +  GP  +H+VT KG+GY  AE+    YHGV KF+P  G   K S R  +
Sbjct: 257 LTTLNNIK--QLDGPQFLHIVTRKGKGYKPAEEDPVLYHGVGKFEPGKGVIPKPSTRP-A 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L   A  D  ++ I  AM  G+GL  F + +P R FDVGIAEQHAVTFAAG 
Sbjct: 314 YTQIFGDWLCDMAAKDSRLIGITPAMREGSGLIRFSKEYPDRYFDVGIAEQHAVTFAAGA 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADGPTH GSFD++++
Sbjct: 374 ACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLSYL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+ VM P+DE E   M+ TA  +D  P+  RYPRG G GV++    + +PL  GKG
Sbjct: 434 RCIPNITVMMPADENECRQMLYTAFQLDT-PTAVRYPRGTGPGVQIKQEMQIVPL--GKG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +G R+ALL +G+ +  CL A   L++     TV + RF KPLD  L+ +LA  HE+
Sbjct: 491 EIRRQGTRIALLAFGSMLSPCLEAGDELDA-----TVVNMRFVKPLDQELVMTLAAEHEL 545

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE +I GG GS V++ LA  G+    ++   L L D ++D G PA  L+  GL  +
Sbjct: 546 LVTVEENTIMGGAGSAVLECLASQGV---NIRLLQLGLSDNFLDQGDPAQMLSDCGLDKT 602

Query: 540 HIAATV 545
            I  +V
Sbjct: 603 GIIKSV 608


>gi|89901646|ref|YP_524117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens
           T118]
 gi|118595611|sp|Q21UG7.1|DXS_RHOFD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|89346383|gb|ABD70586.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Rhodoferax ferrireducens
           T118]
          Length = 632

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/546 (48%), Positives = 356/546 (65%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R ESEYD FGT HSSTSISA LGMA+   ++G +   +AVIGDGA
Sbjct: 93  MATLRQLGGLSGFPQRGESEYDDFGTAHSSTSISAALGMALAAKIRGEERYAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+NNAG  D +++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 LTAGMAFEALNNAGVADCNLLVILNDN-DMSIS--------PPVGALNRHLAKLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V K    P+ ELA +++E A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AAAKNVGKTVLKG-APPLFELAKRLEESAKGMVVPA--TLFEKFGFNYIGPIDGHDLDAL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G Q  +++  Q+
Sbjct: 261 IPTLENIKHLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLQAPATSPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A VD  +V I  AM  G+G+  F +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 319 FTQVFGQWLCDMAAVDPRLVGITPAMREGSGMVEFEQRFPQRFFDVGIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ++HDV +Q LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGLKPVVAIYSTFLQRGYDQLIHDVAIQNLPVVFALDRAGLVGADGATHAGAYDIPFL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+ V  P+DE E   +++TA A  + P   RYPRG G G  +  G + +P   G+G
Sbjct: 439 RCIPNVSVACPADENECRQLLSTAFA-QNHPVAVRYPRGAGAGTVVQAGLEALPF--GQG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I   G  VA+L +GT     L   AL  +  L +TV + R+ KPLD AL+  +A  H+ 
Sbjct: 496 EIRRAGSSVAILAFGT-----LLHPALQVAEKLNVTVVNMRWVKPLDVALLLQVAADHDA 550

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEEG+I GG GS V++ L   G+L   ++   L L D +I+HG PA  LA  GL  +
Sbjct: 551 LVTVEEGAIMGGAGSAVLEALQAAGVLKPVLQ---LGLRDEFIEHGDPAKLLALQGLDAA 607

Query: 540 HIAATV 545
            I A++
Sbjct: 608 GIQASI 613


>gi|319761831|ref|YP_004125768.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           BC]
 gi|330826309|ref|YP_004389612.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           K601]
 gi|317116392|gb|ADU98880.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           BC]
 gi|329311681|gb|AEB86096.1| deoxyxylulose-5-phosphate synthase [Alicycliphilus denitrificans
           K601]
          Length = 630

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/540 (49%), Positives = 353/540 (65%), Gaps = 32/540 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    KG     +AVIGDGA
Sbjct: 93  MGTLRQLGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D+D++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNAGVADADLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R+V K V +    P+ ELA ++++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AKARDVGKSVLRN-APPLLELAKRLEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +++ K  GP  +HVVT+KG+GY  AE     YHG  KFDP  G    ++   Q+
Sbjct: 261 IPTLENIRSLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPRVGLVKPATPPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGQWLCDMAAKDQRLVGITPAMREGSGMVEFHQRFPGRYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P+M +  P+DE E   ++ TA    D P   RYPRG G+GV    G +G+P   GKG
Sbjct: 439 RCIPHMSMACPADERECRQLLTTAYE-QDHPVAVRYPRGAGVGVAPLAGLEGLPF--GKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G R+A+L +GT +   L A+  L++     TV + R+ KPLD  L+  +A  HE 
Sbjct: 496 EVRRQGRRIAILAFGTLLYPALQAAEKLDA-----TVVNMRWAKPLDTELLLRVAAEHEA 550

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+TVEEG I GG GS V + L   G+L      RPL+   LPD +I+HG PA  LA  GL
Sbjct: 551 LVTVEEGCIMGGAGSAVGEALNAAGVL------RPLLQLGLPDAFIEHGDPARLLALQGL 604


>gi|73540585|ref|YP_295105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
 gi|118595607|sp|Q474C2.1|DXS_RALEJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|72117998|gb|AAZ60261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha JMP134]
          Length = 638

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 272/561 (48%), Positives = 361/561 (64%), Gaps = 36/561 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+T+RQ  G+SGF +RSES+YD FGT HSSTSISA LGMA+G    G +   +AVIGDGA
Sbjct: 90  MNTLRQFGGISGFPRRSESQYDTFGTAHSSTSISAALGMALGARTLGEQRVSIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNKHLARLLSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ K   +  P+ E A + +E+A+GM+  +  TLFEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGMMVPA--TLFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           D LV  L+ ++    +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  + 
Sbjct: 256 DSLVPTLQNIRKRALEGAGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPAAK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F E L   A  DK ++ I  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PARKTYTQVFGEWLCDMAAADKRLIGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA G+ACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGMACEGLKPIVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM PSDE E   ++ TA    + P+  RYPRG G GV      K +P 
Sbjct: 436 DIAYLRCIPNMMVMTPSDENECRQLLTTAFH-QNCPTAVRYPRGAGQGVATEAVLKDVP- 493

Query: 416 EVGKGRI-----LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG +        G+RVA LG+G+ V   L A+  L++     +VAD RF KPLD  L
Sbjct: 494 -VGKGVMRRTGGARSGQRVAFLGFGSMVHPALGAAQALDA-----SVADMRFVKPLDVEL 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           ++ LA+ H  L+TVEEGS+ GG GS V++ LA+ G+    +    L LPDR+IDHG PA 
Sbjct: 548 VKRLAEEHNYLVTVEEGSVMGGAGSAVLEALAEAGI---DIPVLVLGLPDRFIDHGDPAL 604

Query: 530 QLAQAGLTPSHIAATVFNILG 550
            L+Q GL  + I  +V    G
Sbjct: 605 LLSQCGLDAAGIERSVRERFG 625


>gi|152979790|ref|YP_001352021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
           Marseille]
 gi|151279867|gb|ABR88277.1| 1-deoxy-D-xylulose-5-phosphate synthase [Janthinobacterium sp.
           Marseille]
          Length = 621

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 273/562 (48%), Positives = 359/562 (63%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +R ES YD FGT HSSTSISA LGMA+    KG   + +AVIGDGA
Sbjct: 88  MHSLRQIDGISGFPRRDESPYDTFGTAHSSTSISAALGMALAAKTKGEDRHAIAVIGDGA 147

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG + D +++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 148 MTAGMAFEAMNNAGIHDDINLLVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V   +  PM ELA + +E+A+GMI  +  T+FEE G  YIGP+DGH++D 
Sbjct: 199 YAAAKNVGKTV---LPAPMRELAKRFEEHAKGMIVPA--TMFEEFGFNYIGPIDGHDLDS 253

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +KN K  GP  +HVVT KG+GY  AE     YHG  KFDPA G +  S+A+  
Sbjct: 254 LIPTLQNLKNLK--GPQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAEGIK-PSTAKKV 310

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT+ F + L   A  DK +V I  AM  G+G+  F RRFP R +DVGIAEQHAVTFAAG
Sbjct: 311 TYTSVFGDWLCDMAAADKRLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQHAVTFAAG 370

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEGLKP  AIYS+F+QR YDQ++HDV LQ L V FA+DR+GLVGADG TH G++D+ +
Sbjct: 371 MACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRSGLVGADGATHAGNYDIAY 430

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M++T       P+  RYPRG GIG ++      IPL  G 
Sbjct: 431 LRCIPNMVVMAASDENECRQMLSTGFDYQG-PAAVRYPRGGGIGAKVGTDLATIPL--GT 487

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  EG+ +A+L +GT V   L+A   L++     TVA+ RF KPLD  L++ LA +H+
Sbjct: 488 GEIKREGKGIAILAFGTMVAPSLSAGEELDA-----TVANMRFIKPLDVELLKRLAATHD 542

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
            L+TVEEGSI G     V        +      +PL+   LPD++IDHG     LA  GL
Sbjct: 543 ALVTVEEGSIMGGAGAAVAEAMAAAGI-----VKPLLNLGLPDQFIDHGDAGKLLALCGL 597

Query: 537 TPSHIAATVFNILGQTREALEI 558
             + IA ++    G+ +  L +
Sbjct: 598 DAAGIATSIRKRFGKDQPRLVV 619


>gi|257095635|ref|YP_003169276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048159|gb|ACV37347.1| deoxyxylulose-5-phosphate synthase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 629

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/546 (48%), Positives = 348/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G+SGF KRSES YD FG GHSSTSISA LGMA+   +KG    VVA+IGDGA
Sbjct: 91  MAKLRMHGGVSGFPKRSESRYDTFGVGHSSTSISAALGMALAAKIKGETRKVVAIIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AGQA+EA+NNAG  D+DM+VILNDN  +S+         PPVGAL+  L+RL S    
Sbjct: 151 MSAGQAFEALNNAGVADADMLVILNDN-DMSIS--------PPVGALNRYLARLFSGSTF 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+  + +       + E A + +E+ +GM++    TLFEELGL YIGP+DGH+++ L
Sbjct: 202 NAARKAGEKIL-DFSPSLREFAKRAEEHVKGMLTPG--TLFEELGLNYIGPIDGHDLESL 258

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ +K+ K  GP  +HV+T+KG+GY  AE     YHGV+KF P  G     +    +
Sbjct: 259 VPTLQNLKHLK--GPQFLHVITKKGQGYKLAEVDPILYHGVSKFKPEVGIAGGPTGAKPT 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L   A  D  +V I  AM  G+GL  F  R+P R +DVGIAEQHAVTFAAGL
Sbjct: 317 YTQVFGDWLCDMAAADPRLVGITPAMREGSGLLRFSERYPQRYYDVGIAEQHAVTFAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL+P  AIYS+F+QR YDQ+VHDV LQ LPV FA+DR GLVGADGPTH G+FD++F+
Sbjct: 377 ACEGLRPVLAIYSTFLQRGYDQLVHDVALQNLPVVFALDRGGLVGADGPTHHGAFDISFL 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+VVM P+DE E   M+ TA  +D  PS  RYPRG G GV +     G+P  VGKG
Sbjct: 437 TCIPNLVVMTPTDEDECRKMLTTAYRLDG-PSAVRYPRGTGPGVAIEKALVGLP--VGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I   G  VALL +G+ +   LAA   +++     +VA+ RF KP+D  LI +LA  H +
Sbjct: 494 EIRRRGRDVALLAFGSMLTPALAAGEDIDA-----SVANMRFVKPIDRELILALAAEHSL 548

Query: 481 LITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L++VEE + IGG GS V + L +   +    +   L +PD +I+HG  A  LA+ GL   
Sbjct: 549 LVSVEENAVIGGAGSEVERVLEE---IASPTRLLRLGIPDHFIEHGDQALLLAEVGLDRD 605

Query: 540 HIAATV 545
            I A V
Sbjct: 606 GIVAAV 611


>gi|377813360|ref|YP_005042609.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
 gi|357938164|gb|AET91722.1| deoxyxylulose-5-phosphate synthase [Burkholderia sp. YI23]
          Length = 638

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 273/554 (49%), Positives = 353/554 (63%), Gaps = 34/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF +R+ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 89  MPGLRQLGGISGFPRRTESEYDTFGTAHSSTSISAALGMAIANKLQGDNRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVADDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V +    P+ +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLRH-APPVLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPAATPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   A +D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAALDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGNYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IP  VGK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLYTALQ-QSNPTAVRYPRGAGTGVATVKQMTAIP--VGK 491

Query: 420 GRILIE-------GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           G I  E       G+R+A+  +GT V   LAA+  L+     LTVA+ RF KP+D  L+R
Sbjct: 492 GEIRRESSQKLGSGKRIAICAFGTMVAPSLAAAGELD-----LTVANMRFVKPVDADLLR 546

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA +H+ ++T+EEGSI GG GS  V+ L   G++   ++   L LPD +IDHG P   L
Sbjct: 547 ELAATHDAIVTIEEGSIMGGAGSACVEALLASGVIKPVLQ---LGLPDVFIDHGDPGKLL 603

Query: 532 AQAGLTPSHIAATV 545
           A  GL  + I  ++
Sbjct: 604 ASVGLDAAGIVRSI 617


>gi|237749331|ref|ZP_04579811.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           OXCC13]
 gi|229380693|gb|EEO30784.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           OXCC13]
          Length = 619

 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/557 (48%), Positives = 358/557 (64%), Gaps = 30/557 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+T+RQ +GLSGF KR ESE+D FGT HSSTSISA LGMA+   LKG     +AVIGDGA
Sbjct: 88  MNTLRQLNGLSGFPKRDESEFDSFGTAHSSTSISAALGMALAAKLKGEDTYSIAVIGDGA 147

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A+EAMNN G Y D +M+VILNDN  +S+         PPVGAL+S  +RL S + 
Sbjct: 148 ITGGMAFEAMNNVGVYDDINMLVILNDN-DMSIS--------PPVGALNSYFARLMSGKF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V   +  PM  +A K +E+A+ MI+ +  TLFEE G  YIGP+DGH+++ 
Sbjct: 199 YAAAKNVGKTV---LPAPMRHIARKFEEHAKSMIAPA--TLFEEFGFNYIGPIDGHDLEA 253

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  K  GP  +H+VT+KG GY  AE     YHG+ KF P  G +   +A+  
Sbjct: 254 LVPTLQNLKERK--GPQFLHIVTKKGHGYKLAEADPILYHGLGKFCPEEGIKPVLAAKP- 310

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +Y   F   L   A VDK ++ I  AM  G+G+  F + +P R FDVGIAEQHAVTF+AG
Sbjct: 311 TYADIFGNWLCDMAAVDKKLIGITPAMKEGSGMVQFAKDYPERFFDVGIAEQHAVTFSAG 370

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DR+GLVGADG TH G++D+ +
Sbjct: 371 LACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRSGLVGADGATHAGNYDMAY 430

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMAPS E E   M+ TA   +  P+  RYPRG GIG+E  P  +   L +GK
Sbjct: 431 LRCIPNMVVMAPSSENEARQMLTTAYRYNG-PAAVRYPRGAGIGIE--PEKELTALPLGK 487

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G IL +G+ +A+L +GT V   L+A   L++     TV + RF KP+D  LI  +AK+H 
Sbjct: 488 GDILRKGKNIAILAFGTMVNPALSAGEELDA-----TVVNMRFVKPIDKELICEMAKTHP 542

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG+I GG GS V++ LA++ L   T     L LPD++IDHG     LA   L  
Sbjct: 543 CLVTVEEGTIHGGAGSAVMETLAEEKL---THPVLLLGLPDKFIDHGDVGQLLAMHKLDK 599

Query: 539 SHIAATVFNILGQTREA 555
             I A++    G+  ++
Sbjct: 600 HGIMASIIERFGKIDDS 616


>gi|254432745|ref|ZP_05046448.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobium sp. PCC 7001]
 gi|197627198|gb|EDY39757.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobium sp. PCC 7001]
          Length = 641

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 257/557 (46%), Positives = 358/557 (64%), Gaps = 24/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  G++G+ KRSES +D FG GH+STSISA LGMA+ RD +G     VAVIGDGA
Sbjct: 87  FHTLRQKGGVAGYLKRSESRFDHFGAGHASTSISAALGMALARDRRGETFKCVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN  +S+         PPVGALS+ L+R++ ++P
Sbjct: 147 LTGGMALEAINHAGHLPRTNLLVVLNDN-DMSIS--------PPVGALSTHLNRMRHSKP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVD---EYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ + + A+   K +     EL  ++    E  R +       +FEELG  Y+GP+DGHN
Sbjct: 198 VQFIADNAEEAIKHLPFMHGELPPELKNLKESMRRLAVPKVGAVFEELGFTYMGPIDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           + ++V   E+  +T+  GPVL+HV T KG+GY YAE+    YH  + FD ATGK F SS 
Sbjct: 258 IAEMVRTFEQAHHTE--GPVLVHVATTKGKGYAYAEEDQVGYHAQSSFDLATGKAFPSSK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  F + L+   + D  VV I AAM  GTGL+L  +  P + FDVGIAEQHAVT
Sbjct: 316 PKPPSYSKVFGQTLVKICDQDPRVVGITAAMATGTGLDLLEKALPAQYFDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+ACEGL+P CAIYS+F+QRAYDQ++HDV +QKLPV F MDRAG+VGADGPTH G +
Sbjct: 376 MAAGMACEGLRPVCAIYSTFLQRAYDQLIHDVGIQKLPVTFVMDRAGIVGADGPTHQGQY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D++++ C+PN  VMAP DEAEL  M+ TA    + P   R PRG G GV  P   +G  P
Sbjct: 436 DISYLRCVPNFTVMAPRDEAELQRMLITAIQ-HNGPCALRIPRGEGEGV--PLAEEGFEP 492

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+G+G +L +G+ + ++ YG  V   +A + LL+  G+R  V +ARF +PLD ALI  +
Sbjct: 493 LEIGRGELLADGDDLLIVAYGAMVHPAMATAGLLQEQGVRAAVINARFLRPLDEALILPM 552

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFG+ V + L    +L    +   + +PD  +DH SPA     
Sbjct: 553 ARRIGRVVTMEEGCLPGGFGAAVTESLVDHDVLVPVFR---IGIPDTLVDHASPAQSKET 609

Query: 534 AGLTPSHIAATVFNILG 550
            GLTP  +A  +    G
Sbjct: 610 LGLTPPQMAERILERFG 626


>gi|418062607|ref|ZP_12700377.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
 gi|373563851|gb|EHP90009.1| 1-deoxy-D-xylulose-5-phosphate synthase, partial [Methylobacterium
           extorquens DSM 13060]
          Length = 515

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/434 (58%), Positives = 315/434 (72%), Gaps = 24/434 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDL-------KG----RK 49
           + T+RQ  GLSGFTKRSESEYD FG  HSSTSISA LGMAV RDL       KG    ++
Sbjct: 93  IRTLRQGGGLSGFTKRSESEYDPFGAAHSSTSISAALGMAVARDLEEADAKAKGGPAPKR 152

Query: 50  NNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSS 109
            N++AVIGDG+M+AG AYEAMNNAG L S +IVILNDN  +S+         PPVGA+S+
Sbjct: 153 RNMIAVIGDGSMSAGMAYEAMNNAGALHSRLIVILNDN-DMSIA--------PPVGAMSA 203

Query: 110 ALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYI 169
            L+RL S    R LRE AK + K +   +++ AA  +EYAR +I G G T+FEE+G +Y+
Sbjct: 204 YLARLASGGTYRSLRETAKQLGKLLPKALYQRAAAAEEYARSLIVGGG-TMFEEMGFHYV 262

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHN+D L+ +L+ V+++   GP+L+HVVT+KG+GY  AE +AD+YHGV KFD  +G
Sbjct: 263 GPVDGHNLDHLLPVLKNVRDSDQ-GPILLHVVTQKGKGYAPAEASADRYHGVVKFDVVSG 321

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
            Q K+ A   +YT  F E+LI  A+ D  VVAI AAM GGTG++LF +  P R FDVGIA
Sbjct: 322 VQAKAKANAPAYTRVFGESLIKAADADPKVVAITAAMPGGTGIDLFGKAHPDRTFDVGIA 381

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFA GLA EG KPF AIYS+F+QRAYDQVVHDV LQ L VRF +DRAGLVGADG 
Sbjct: 382 EQHAVTFAGGLATEGYKPFVAIYSTFLQRAYDQVVHDVALQNLAVRFCLDRAGLVGADGA 441

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G+FD+ ++ CLPNM VMA +DEAEL HMVAT  A D  P   RYPRG G+G+ELP  
Sbjct: 442 THAGAFDLAYLCCLPNMTVMAAADEAELVHMVATCHAHDSGPIALRYPRGEGVGIELP-- 499

Query: 410 NKGIPLEVGKGRIL 423
             G+PL +G+GR++
Sbjct: 500 ETGVPLAIGRGRVV 513


>gi|134093560|ref|YP_001098635.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herminiimonas
           arsenicoxydans]
 gi|133737463|emb|CAL60506.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Herminiimonas arsenicoxydans]
          Length = 609

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/555 (48%), Positives = 357/555 (64%), Gaps = 34/555 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ DG+SGF +R ES YD FGT HSSTSISA LGMA+    KG   + +AVIGDGA
Sbjct: 76  MHSLRQRDGISGFPRRDESVYDTFGTAHSSTSISAALGMALAARTKGENRHAIAVIGDGA 135

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG + D +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 136 MTAGMAFEALNNAGIHDDINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGQF 186

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V   +  P+ ELA + +E+A+GMI  +  T+FEE G  YIGP+DGH++D 
Sbjct: 187 YAAAKNVGKTV---LPAPVRELAKRFEEHAKGMIVPA--TMFEEFGFNYIGPIDGHDLDS 241

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G +  ++A   
Sbjct: 242 LIPTLQNLKHLK--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFDPAEGIK-PAAASKV 298

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT+ F + L   A  D  ++ I  AM  G+G+  F RRFP R +DVGIAEQHAVTFAAG
Sbjct: 299 TYTSVFGDWLCDMAAADDKLIGITPAMREGSGMVEFERRFPGRYYDVGIAEQHAVTFAAG 358

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ +
Sbjct: 359 MACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAY 418

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M++T    +  P+  RYPRG GIG ++      IPL  G 
Sbjct: 419 LRCIPNMVVMAASDENECRQMLSTGFHYNG-PAAVRYPRGGGIGAKVEKNLATIPL--GT 475

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  EG+R+A+L +GT V   L A   L++     TVA+ RF KPLD  L++ LA +HE
Sbjct: 476 GEIRREGKRIAILAFGTMVAPSLRAGEELDA-----TVANMRFVKPLDVELLKRLAATHE 530

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
            ++TVEEG I G     V        +      +PL+   LPD++IDHG     LA  GL
Sbjct: 531 AIVTVEEGCIMGGAGAAVAEALAAAGI-----VKPLLNLGLPDQFIDHGDAQQLLAMCGL 585

Query: 537 TPSHIAATVFNILGQ 551
             + IAAT+    G+
Sbjct: 586 DAAGIAATIRQRFGK 600


>gi|238026700|ref|YP_002910931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
 gi|237875894|gb|ACR28227.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia glumae BGR1]
          Length = 648

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/550 (49%), Positives = 352/550 (64%), Gaps = 28/550 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF  R+ES YD FGT HSSTSISA  GMAV   L+  +   +AVIGDGA
Sbjct: 89  MPTLRQIGGISGFPVRTESVYDTFGTAHSSTSISAAFGMAVAAKLQDSERRAIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   +IVILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVADDVPLIVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  PM  LA K++E+A+GMI  +  T+FEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLS-VAPPMLGLARKLEEHAKGMIMPA--TMFEEFGFNYIGPIDGHDLDA 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L  +K  +  GP  +HVVT+KG GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLRNIKGLR--GPQFLHVVTKKGLGYKLAEADPVLYHGPGKFNPAEGIRPPATPPRK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +Y   F E L   AE+D  VV I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG
Sbjct: 315 TYAQVFGEWLCDAAELDARVVGITPAMREGSGMVEFEKRFPARYYDVGIAEQHAVTFAAG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAG+VGADG TH G++D  F
Sbjct: 375 LATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGIVGADGATHAGAYDFAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL---E 416
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV      + +P+   E
Sbjct: 435 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGPGVATARQMEALPIGRGE 493

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           + +     EG+R+A+L +GT V   LAA+  +++     TVA+ RF KPLD  L+R LA+
Sbjct: 494 IRRRSTQQEGQRIAILAFGTMVTPALAAAEEIDA-----TVANMRFVKPLDVELVRQLAE 548

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           +H+ ++TVEE ++ GG GS  V+ L  DG L   ++   L LPDR+IDHG PA  LA  G
Sbjct: 549 THDAIVTVEEAAVMGGAGSACVEALMADGPLRPVLQ---LGLPDRFIDHGDPAKLLAGCG 605

Query: 536 LTPSHIAATV 545
           L  + IA ++
Sbjct: 606 LDGAGIAQSI 615


>gi|148263091|ref|YP_001229797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
           Rf4]
 gi|146396591|gb|ABQ25224.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter uraniireducens
           Rf4]
          Length = 637

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 268/554 (48%), Positives = 350/554 (63%), Gaps = 23/554 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T RQ  G+SGF KRSES +D FG GHSSTSISAGLGMAV   LK   + V+AVIGDG++T
Sbjct: 91  TQRQYHGISGFPKRSESMHDAFGAGHSSTSISAGLGMAVAHGLKEEASKVIAVIGDGSLT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+EA+N AG+L  ++IV+LNDN ++S+           VGALS+ +SR  +    R 
Sbjct: 151 GGIAFEALNQAGHLHKNLIVVLNDN-EMSISKN--------VGALSTFISRKLTGSYYRG 201

Query: 123 LREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           L++  +G+ K I   GG +   A K +   +G ++    TLFE LG  YIGPV GH++  
Sbjct: 202 LKKEMQGLLKNIPAIGGNILHFARKAENSLKGFLTPG--TLFEALGFEYIGPVQGHDLPQ 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ I++ V+  +  GPVL+HV+T KG+GY  AEK  DK+HGV  FD  TGK        Q
Sbjct: 260 LIEIMQNVRALE--GPVLVHVMTTKGKGYQPAEKTPDKFHGVGPFDVKTGKVIAGKPGAQ 317

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F E ++  A  DK ++AI AAM  GTGL  F + +P R FDVGIAEQHA+TFAAG
Sbjct: 318 SYTGIFGETMVKLAAEDKKIIAITAAMPDGTGLTPFAKAYPDRFFDVGIAEQHALTFAAG 377

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EG +P  AIYS+F+QRAYDQV HD+ LQKLPV  A+DRAGLVG DGPTH G FD+++
Sbjct: 378 MATEGFRPVAAIYSTFVQRAYDQVFHDICLQKLPVTLALDRAGLVGDDGPTHHGVFDLSY 437

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LP M VMAP DE EL HM+ T A   DRP   RYPRG G GV +    + IP  +G 
Sbjct: 438 LRHLPEMTVMAPKDENELQHMLKT-AIYSDRPIALRYPRGAGYGVAMDESLQAIP--IGV 494

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G  L EG  + L+  G+ V   + A+ LL+  G+R TV +ARF KPLD  LI + A    
Sbjct: 495 GEQLAEGGDLTLVAIGSTVYPAMEAAELLKEKGIRATVINARFVKPLDRNLILAAAGRTG 554

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            +ITVEE ++ GGFGS V++ LA +      ++ + + +PDRYI+ GS A       L  
Sbjct: 555 CIITVEENAMQGGFGSAVLELLADEA---AGIRVKRIGVPDRYIEQGSQAQLRQDLRLDA 611

Query: 539 SHIAATVFNILGQT 552
           + IA T    LG+ 
Sbjct: 612 AGIAQTAAEFLGKN 625


>gi|325983214|ref|YP_004295616.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212]
 gi|325532733|gb|ADZ27454.1| deoxyxylulose-5-phosphate synthase [Nitrosomonas sp. AL212]
          Length = 614

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 263/550 (47%), Positives = 352/550 (64%), Gaps = 27/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+ +R  DGL+GF +R ESEYD FGT HSSTSISA LGMAV   L       +A+IGDGA
Sbjct: 89  MNKLRMQDGLAGFPRRDESEYDAFGTAHSSTSISAALGMAVAAQLNRTDRRAIAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG +D++++VILNDN  +S+          PVGAL++ L++L S R  
Sbjct: 149 MSAGMAFEALNNAGVMDANLLVILNDN-DMSISR--------PVGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R   + V   +   + ELA + +E+ +GM++    TLFEE G  YIGP+DGH++D L
Sbjct: 200 ATARRAGEKVLGVVPTVL-ELAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDLDVL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  +K  +  GP  +HVVT KG GY  AE+    YHGV KFDP  G   KS+ +  +
Sbjct: 257 VTTLGNIKQLE--GPQFLHVVTRKGAGYKVAEEDPILYHGVGKFDPKKGIVTKSNGKP-T 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L   A  D  ++ +  AM  G+GL  F   +P R FDVGIAEQHAVTFAAG 
Sbjct: 314 YTQIFGDWLCDMAAQDSRLIGVTPAMREGSGLVRFSEEYPERYFDVGIAEQHAVTFAAGA 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADGPTH GSFD+T++
Sbjct: 374 ACDGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFAIDRAGLVGADGPTHAGSFDLTYL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM VMAP+DE E   M+ TA  + D P+  RYPRG G G+++    + +P  VG+G
Sbjct: 434 RCIPNMTVMAPADENECRQMLYTAFKL-DTPTAVRYPRGTGPGIQVQKEMQALP--VGRG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +G+++ALL +G+ +  CLAA      + L  TV + RF KPLD  L+ SL   H +
Sbjct: 491 EIRRQGKKIALLAFGSMLAPCLAA-----GDELNATVVNMRFIKPLDDDLLASLTADHNL 545

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE ++ GG GS V++ L    +  G ++   L LPD +I+ G  A  LA  GL  S
Sbjct: 546 LVTVEENTVMGGAGSAVIESLNSQRIQVGVLQ---LGLPDIFIEQGDHAQMLANCGLDSS 602

Query: 540 HIAATVFNIL 549
            I  +V  +L
Sbjct: 603 GIIKSVRAVL 612


>gi|71908674|ref|YP_286261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
           RCB]
 gi|118595510|sp|Q47BJ0.1|DXS_DECAR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|71848295|gb|AAZ47791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dechloromonas aromatica
           RCB]
          Length = 618

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 274/546 (50%), Positives = 347/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+R   G+SGF KR+ES YD FG GHSSTSISA LGMA+    KG     +A+IGDGA
Sbjct: 91  MSTLRMHGGVSGFPKRAESPYDTFGVGHSSTSISAALGMALAAKHKGEDRKAIAIIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EAMNNAG  D+DM+VILNDN ++S+         PPVGAL++ L+RL S++  
Sbjct: 151 MSAGMAFEAMNNAGVADADMLVILNDN-EMSIS--------PPVGALNNILTRLTSSKTY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE  + +      P+ ELA + +E+ +GMI+    TLFEE G +Y GP+DGH++D L
Sbjct: 202 NVAREAGRHMLG-FAPPLLELARRAEEHVKGMIAPG--TLFEEFGFHYYGPIDGHDLDAL 258

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HV+T+KG+GY  AE     YHGV KF    G Q        +
Sbjct: 259 IPTLENLKKLK--GPKFLHVITKKGQGYKLAENDPILYHGVGKFAACDGIQSAKGPAKLT 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L   A+ D  +V I  AM  G+G+  F      R FDVGIAEQHAVTFAAGL
Sbjct: 317 YTQVFGDWLCDMAKADSRLVGITPAMREGSGMVRFSAEHADRYFDVGIAEQHAVTFAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ+VHDV LQ LPV FA+DR GLVGADGPTH G+FD++F+
Sbjct: 377 ACEGLKPVVAIYSTFLQRGYDQLVHDVALQNLPVIFAVDRGGLVGADGPTHHGTFDLSFV 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM VMAP+DEAE   M++TA  ID  PS  RYPRG+G G    P  K   L VGKG
Sbjct: 437 TCIPNMTVMAPADEAECRKMLSTAMTIDG-PSMVRYPRGSGTGT--IPEAKLDTLPVGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I   G+ +ALL +G+     L A+A+     L  TVA+ RF KPLD  LI  LA +H +
Sbjct: 494 DIRRRGKDIALLAFGS-----LVAAAVAAGEELDATVANMRFIKPLDADLIVELAGNHSL 548

Query: 481 LITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+++EE + IGG GS + + LA+ GL    V    L LPDR+IDHG     LA+ GL   
Sbjct: 549 LVSIEENAVIGGAGSEIERVLAERGL---QVPVLRLGLPDRFIDHGEQGQLLAELGLDKE 605

Query: 540 HIAATV 545
            I   V
Sbjct: 606 GIVRAV 611


>gi|387129646|ref|YP_006292536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM7]
 gi|386270935|gb|AFJ01849.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM7]
          Length = 610

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/546 (47%), Positives = 356/546 (65%), Gaps = 33/546 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ DGLSGF KRSES +D FG GHSSTS+SA LGMA+           VA+IGDGA
Sbjct: 92  MHTMRQADGLSGFPKRSESPFDSFGVGHSSTSVSAALGMALAAQSNQDARRAVAIIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAGQAYEA+ +AG L ++++V+LNDN ++S+           VG +++ L+RL S+R  
Sbjct: 152 LTAGQAYEALAHAGDLSANLLVVLNDN-EMSISRN--------VGGMANYLARLLSSRFY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              RE +K V ++I     E+A + +E+ +GM+     TLFEE+G  YIGP+DGHN+D L
Sbjct: 203 TSAREGSKKVLEKIPSAW-EIARRAEEHMKGMVVPG--TLFEEMGFNYIGPIDGHNLDTL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  ++N K  GP  +H+VT+KG+G+  AE+   KYHGV+   PA GK    S+  +S
Sbjct: 260 ITTLGNLRNCK--GPQFLHIVTKKGKGFTPAEQEPCKYHGVS---PAGGK----SSAGKS 310

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L+  A  DK ++ I  AM  G+GLN F  RFP R FDVGIAEQHAVT AAGL
Sbjct: 311 YTQVFSDWLVDMAVADKQLIGITPAMCEGSGLNRFAERFPDRYFDVGIAEQHAVTLAAGL 370

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACE  KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADGPTH GSFD+T++
Sbjct: 371 ACENKKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHAGSFDLTYL 430

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM++MAP+DE E   M+ T    D  P+  RYPRG G G  + P    +P  +GK 
Sbjct: 431 RCIPNMLIMAPADENECRQMLTTGFHFDG-PAAVRYPRGVGSGSPVQPDLSALP--IGKA 487

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           + L +G++VA+L +G+ + + L A    ++     +V + RF KPLD  LI  LA SH++
Sbjct: 488 KQLRQGQKVAILAFGSMLSAALEAGEKTDA-----SVINMRFVKPLDTTLINQLADSHDL 542

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           LIT+EE ++ GG GS V ++L+  G        R + LPDR+ D G+    L   GL+ +
Sbjct: 543 LITIEENAVAGGAGSGVAEYLSSIG---SKTPIRLIGLPDRFQDQGNHQQMLNDVGLSAN 599

Query: 540 HIAATV 545
            +  T+
Sbjct: 600 GLIDTI 605


>gi|413965126|ref|ZP_11404352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. SJ98]
 gi|413927800|gb|EKS67089.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderia sp. SJ98]
          Length = 638

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/554 (49%), Positives = 353/554 (63%), Gaps = 34/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF +R+ESEYD FGT HSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 89  MPGLRQLGGISGFPRRAESEYDTFGTAHSSTSISAALGMAIANKLQGDNRFSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVADDVPLLVILNDN-DMSIS--------PPVGALNRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V +    P+ +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLRH-APPVLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTAPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   A  D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAAQDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGNYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM VMA SDE E   M+ TA      P+  RYPRG G GV        IP  VGK
Sbjct: 435 LRCIPNMTVMAASDENECRQMLYTALQ-QPNPTAVRYPRGAGTGVATVKQMTAIP--VGK 491

Query: 420 GRILIE-------GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           G I  E       G+R+A+  +GT V   LAA+  L+     LTVA+ RF KP+D  L+R
Sbjct: 492 GEIRRESSQKLGSGKRIAICAFGTMVAPSLAAAEELD-----LTVANMRFVKPVDADLLR 546

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA +H+ ++T+EEG+I GG GS  V+ L    ++   ++   L LPD +IDHG PA  L
Sbjct: 547 ELAATHDAIVTIEEGTIMGGAGSACVEALLASSIVKPVLQ---LGLPDVFIDHGDPAKLL 603

Query: 532 AQAGLTPSHIAATV 545
           +  GL  + IA ++
Sbjct: 604 SSVGLDAAGIAKSI 617


>gi|409407600|ref|ZP_11256051.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
 gi|386433351|gb|EIJ46177.1| 1-deoxy-D-xylulose 5-phosphate synthase [Herbaspirillum sp. GW103]
          Length = 621

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/560 (48%), Positives = 365/560 (65%), Gaps = 30/560 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +G+SGF +R ES+YD FGT HSSTSISA LGMA+    +G   + +AVIGDGA
Sbjct: 87  MDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISAALGMALAARTQGSDRHAIAVIGDGA 146

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG + D +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 147 MTAGMAFEALNNAGVHEDINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGKF 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             + R+V K V   + GP+ ELA +++E+A+GM+  +  T+FEE G  YIGP+DGH++D 
Sbjct: 198 YAKARDVGKSV---LPGPVLELAKRLEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLDS 252

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  K  GP  +HVVT+KG+GY  AE     YHG  KF+P+ G +  S+    
Sbjct: 253 LIPTLQNLKQLK--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPSEGIK-PSAGGKL 309

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F + L   A  D+ +V I  AM  G+G+  F + FP R +DVGIAEQHAVTFAAG
Sbjct: 310 TYTQVFGQWLCDMAAADEKLVGITPAMREGSGMVGFEKTFPKRYYDVGIAEQHAVTFAAG 369

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG+KP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 370 MACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLAF 429

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M++TA      P+  RYPRG G+G  +    + +PL  G+
Sbjct: 430 LRCIPNMVVMAASDENECRKMLSTAYQYPG-PAAVRYPRGAGVGAAVEKTLETLPL--GR 486

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G  VA+L +G+     L A AL   + L  TVA+ RF KPLD  L++ LA SH+
Sbjct: 487 GEIRRQGRDVAILAFGS-----LLAPALSAGDKLNATVANMRFIKPLDVELVKQLAASHD 541

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG I GG G+ V + LA  G+    +    L LPDR+IDHG  A  LAQ GL  
Sbjct: 542 ALVTVEEGCIMGGAGAAVSEALAAAGINKPVLH---LGLPDRFIDHGDAAQLLAQCGLDA 598

Query: 539 SHIAATVFNILGQTREALEI 558
             IA ++    G+ +  L +
Sbjct: 599 DGIAQSIVQRFGKDQTRLVV 618


>gi|33597052|ref|NP_884695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella parapertussis
           12822]
 gi|33600897|ref|NP_888457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
           RB50]
 gi|410420905|ref|YP_006901354.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
           MO149]
 gi|410472461|ref|YP_006895742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella parapertussis
           Bpp5]
 gi|412338916|ref|YP_006967671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella bronchiseptica
           253]
 gi|427815399|ref|ZP_18982463.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           1289]
 gi|427819665|ref|ZP_18986728.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           D445]
 gi|41016954|sp|Q7W7Q0.1|DXS_BORPA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|41016955|sp|Q7WL37.1|DXS_BORBR RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|33566503|emb|CAE37759.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella parapertussis]
 gi|33568497|emb|CAE32409.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           RB50]
 gi|408442571|emb|CCJ49122.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella parapertussis
           Bpp5]
 gi|408448200|emb|CCJ59881.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           MO149]
 gi|408768750|emb|CCJ53520.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           253]
 gi|410566399|emb|CCN23960.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           1289]
 gi|410570665|emb|CCN18858.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           D445]
          Length = 620

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/543 (49%), Positives = 354/543 (65%), Gaps = 27/543 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +AVIGDGA
Sbjct: 90  MAHLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVTPNINLLVVLNDND-MSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA +++E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAVLQHVP-PVLELARRLEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ ++     G   +HVVT KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLR--ALPGLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQQAKAPARK 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F + L   AE D+ +V I  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFGQWLCDMAERDERLVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QR YDQ+VHDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 376 LACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV APSDE+E   +++T       P+  RYPRG G G  +  G   +PL  GK
Sbjct: 436 LRCVPNMVVAAPSDESEARLLLSTCYE-HPGPASVRYPRGAGCGAAVGEGLATVPL--GK 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  EG R+A+LG+GT VQ+ L A+  +++     TVAD RF KPLD  L+  LA  H+
Sbjct: 493 GLVRREGRRIAILGFGTLVQAALGAAGQIDA-----TVADMRFVKPLDRELVLELAARHD 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEE +I GG GS V++ LA+ G+   T+    L LPD +IDHG  A  LA  GL  
Sbjct: 548 ALVTVEEAAIMGGAGSAVLETLAEAGV---TLPVLQLGLPDAFIDHGDQAALLAGLGLDA 604

Query: 539 SHI 541
           + I
Sbjct: 605 AGI 607


>gi|300867681|ref|ZP_07112326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
 gi|300334264|emb|CBN57498.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria sp. PCC 6506]
          Length = 635

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 260/553 (47%), Positives = 359/553 (64%), Gaps = 25/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES++D FG GH+STSISAGLGMA+ RD+KG    VVAVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAGLGMALARDMKGENFKVVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN ++S+         P VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVVLNDN-EMSIS--------PNVGAIPRYLNKMRLSAP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L++  +   K I         +++    GM    +   G+ + EELG  Y+GPVDGH
Sbjct: 198 VQFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRLAVPKVGAVI-EELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+A  ++    +  GPVL+HVVT KG+GY  AEK    YH    F+ ATGK   S+
Sbjct: 257 NLEELIATFKQAHTIQ--GPVLVHVVTVKGKGYAIAEKDQVGYHAQNPFNLATGKAIPSN 314

Query: 236 -ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  +Y+  FA ALI  AE +  +VAI AAM  GTGL+ F  + P +  DVGIAEQHAV
Sbjct: 315 RPKPPAYSKVFAHALIKLAEDNPKIVAITAAMATGTGLDKFQEKLPKQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QRAYDQ+VHDV +QKLPV F +DRAG+VGADGPTH G 
Sbjct: 375 TCAAGLACEGIRPVVAIYSTFLQRAYDQIVHDVCIQKLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGI 413
           +D++++ CLPNMV+MAP DEAEL  M+ T       P   RYPRGNG GV L   G + +
Sbjct: 435 YDISYLRCLPNMVLMAPKDEAELQRMIVTGINHTSGPIAMRYPRGNGYGVPLMEEGWEEL 494

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P  +GKG IL +G+ V +LGYG+ VQ  + A+ +L  +G+  TV +ARF KPLD  LI  
Sbjct: 495 P--IGKGEILRQGDDVLMLGYGSMVQPAMQAAEILSEHGIEATVVNARFAKPLDEELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA     +IT+EEG + GGFGS V + L    +    ++   + +PD  +DH +P     
Sbjct: 553 LAHKIGRVITLEEGCVMGGFGSAVAESLLDRDIAAKVIR---IGVPDVLVDHATPEQSFT 609

Query: 533 QAGLTPSHIAATV 545
           + GL P+ IA  V
Sbjct: 610 ELGLNPAQIAERV 622


>gi|333916048|ref|YP_004489780.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
 gi|333746248|gb|AEF91425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4]
          Length = 626

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/554 (48%), Positives = 360/554 (64%), Gaps = 24/554 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GLSGF +R+ES YD FGT HSSTSISA LGMA+    KG     +AVIGDGA
Sbjct: 93  MASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNAGVTDANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R++ K V KQ+  P+ ELA ++++ A+GM+  +  TLFE  G  YIGP+DGH++D L
Sbjct: 204 AKARDMGKSVLKQVP-PLLELAKRLEQQAKGMVVPA--TLFENFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDP+ G    ++   Q+
Sbjct: 261 IPTLENIKSLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLVKPATPPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F   L   A+ D+ +V I  AM  G+G+  F RRFP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGHWLCDMADKDQRLVGITPAMREGSGMVEFHRRFPGRYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ++HDV LQKLPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P+M +  P+DE E   ++ TA    D P   RYPRG G+GV      +G+P   G+ 
Sbjct: 439 RCIPHMSMACPADERECRQLLTTAYE-QDHPVAVRYPRGAGVGVAPLESLEGLPFGKGEV 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R     ++VA+L +GT +   LAA+  L++     TV + R+ KPLD  L+R +A +HE+
Sbjct: 498 RRESAKKQVAILAFGTLLYPALAAAEALDA-----TVVNMRWAKPLDEELLRQVASTHEL 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++TVEEG I GG GS V + L   G+   T +   L LPD +I+HG PA  LA  GL  +
Sbjct: 553 IVTVEEGCIMGGAGSAVAESLQAAGI---TRQLLQLGLPDEFIEHGDPAKLLALQGLDAA 609

Query: 540 HIAATVFNILGQTR 553
            I A+V   L   R
Sbjct: 610 GIEASVRAHLAPER 623


>gi|397688272|ref|YP_006525591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           10701]
 gi|395809828|gb|AFN79233.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           10701]
          Length = 629

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/547 (47%), Positives = 352/547 (64%), Gaps = 28/547 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +R ESEYD FG GHSSTSI A LGMA+   L+G++   +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRCESEYDTFGVGHSSTSIGAALGMAIAARLQGQQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + +DM+V+LNDN  +S+           VG +S+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGADMLVVLNDN-DMSISRN--------VGGMSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++   +GP  +HVVT+KG+G+  AE     +H + K +P    +   +     
Sbjct: 270 IATLRNMRDL--SGPQFLHVVTKKGKGFAPAEVDPITWHAINKLEPLDAPKKPKAPSGPR 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AEVD  +  I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAEVDARLTGITPAMKEGSDLVAFAERFPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGK 419
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG G      P  +G+ PLE+GK
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYLFEG-PAAVRYPRGTGPNA---PIERGLEPLEIGK 503

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   LA    L++     TV D RF KPLD AL+R LA SHE
Sbjct: 504 GVVRRQGSKVALLVFGVQLTEALAVGETLDA-----TVVDMRFVKPLDEALVRQLADSHE 558

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE SI GG GS V +FLA++GLL   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 559 LLVTIEENSIMGGAGSAVNEFLAREGLLQPILN---LGLPDHYVEHAKPAQMLAECGLDE 615

Query: 539 SHIAATV 545
           + I A V
Sbjct: 616 AGIEAAV 622


>gi|291613175|ref|YP_003523332.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus
           ES-1]
 gi|291583287|gb|ADE10945.1| deoxyxylulose-5-phosphate synthase [Sideroxydans lithotrophicus
           ES-1]
          Length = 614

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/546 (47%), Positives = 355/546 (65%), Gaps = 27/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G+SGF KR+ES YD FGTGHSSTSISA LGMAV   L G+ N  VA+IGDGA
Sbjct: 89  MGGLRMAHGISGFPKRNESRYDAFGTGHSSTSISAALGMAVAARLAGKDNRSVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+ G A+EA+NNAG +D++++VILNDN  +S+          PVGAL++ L++L S R  
Sbjct: 149 MSGGMAFEALNNAGAMDANLLVILNDN-DMSISR--------PVGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R  ++ + K +  P+ E A + +E+ +GM++    TLFEE G  YIGP+DGH++D L
Sbjct: 200 AAMRRGSEKILKGMP-PVLEFAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDLDVL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  ++  K  GP  +H+VT+KG+GY +AE     YHGV KFDP+ G   K S +  +
Sbjct: 257 VETLGNIR--KLEGPQFLHIVTQKGKGYAHAEDDCVLYHGVGKFDPSHGITAKPSTKP-T 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F E L   A  D  +V I  AM  G+G+  F  +FP R FDVGIAEQHA+TFAAGL
Sbjct: 314 YTQVFGEWLCDMAAQDARLVGITPAMCEGSGMVEFAEKFPQRYFDVGIAEQHALTFAAGL 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+G KP  AIYS+F+QR YDQ++HD+ +Q LPV  A+DR GLVGADG TH GSFD++++
Sbjct: 374 ACDGFKPVVAIYSTFLQRGYDQLIHDIAIQNLPVVLAIDRGGLVGADGATHAGSFDLSYL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             +PNM VMAP+DE E   M++TA  + D PS  RYPRG G GV +    + IP  VGKG
Sbjct: 434 RSVPNMTVMAPADEKECRQMLSTAFHL-DTPSAVRYPRGTGPGVMVQKDLQAIP--VGKG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG +VA+L +G+ +   L A+  L++     TVA+ RF KPLD  L+  LA+ H +
Sbjct: 491 EVRREGGKVAILAFGSMLAPALEAAGQLDA-----TVANMRFVKPLDEELVLKLAREHAL 545

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE ++ GG GS V + LA+ G++   V    L LPD +++ G P   LA  GL  +
Sbjct: 546 LVTVEENTLQGGAGSAVAECLARRGIV---VPMLHLGLPDAFLEQGDPVQMLADCGLDAN 602

Query: 540 HIAATV 545
            IA ++
Sbjct: 603 GIARSI 608


>gi|427824862|ref|ZP_18991924.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           Bbr77]
 gi|410590127|emb|CCN05206.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella bronchiseptica
           Bbr77]
          Length = 620

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 271/543 (49%), Positives = 354/543 (65%), Gaps = 27/543 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +AVIGDGA
Sbjct: 90  MAHLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVTPNINLLVVLNDND-MSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA +++E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAVLQHVP-PVLELARRLEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ ++     G   +HVVT KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLR--ALPGLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQQAKAPARK 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F + L   AE D+ +V I  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFGQWLCDMAERDERLVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QR YDQ+VHDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 376 LACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV APSDE+E   +++T       P+  RYPRG G G  +  G   +PL  GK
Sbjct: 436 LRCVPNMVVAAPSDESEARLLLSTCYE-HPGPASVRYPRGAGCGAAVGEGLATVPL--GK 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  EG R+A+LG+GT VQ+ L A+  +++     TVAD RF KPLD  L+  LA  H+
Sbjct: 493 GLVRREGRRIAILGFGTLVQAALGAADQIDA-----TVADMRFVKPLDRELVLELAARHD 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEE +I GG GS V++ LA+ G+   T+    L LPD +IDHG  A  LA  GL  
Sbjct: 548 ALVTVEEAAIMGGAGSAVLETLAEAGV---TLPVLQLGLPDAFIDHGDQAALLAGLGLDA 604

Query: 539 SHI 541
           + I
Sbjct: 605 AGI 607


>gi|319788993|ref|YP_004150626.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
 gi|317113495|gb|ADU95985.1| deoxyxylulose-5-phosphate synthase [Thermovibrio ammonificans HB-1]
          Length = 617

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 267/553 (48%), Positives = 356/553 (64%), Gaps = 29/553 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
             T+RQ  G+SGF    ES YD FGTGHSSTSISA LG+ VG+ LKG + +V+AVIGDGA
Sbjct: 87  FKTLRQFGGISGFPSIKESPYDAFGTGHSSTSISAALGIKVGKRLKGEEGHVIAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG+AYE +NNAG L  D+IVILNDN ++S+           +GA+S+ L++L +   L
Sbjct: 147 LTAGEAYEGLNNAGQLKEDLIVILNDN-EMSISKN--------IGAISNYLTKLTTGESL 197

Query: 121 RELREVAKGVTKQI-GGPMHELAAKVDEY-ARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
           R  +E  + VTK+I G   ++   +V++   +G+       LFEELG  Y+GP+DGH+++
Sbjct: 198 RRAKERLEEVTKKIFGDTFYKGLKRVEDLIVKGLFPPG--MLFEELGFRYVGPIDGHDIE 255

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            LV  L  V  +K  GP L+HV+T+KG+G+  AE+  DK+HGV+       K+  S  + 
Sbjct: 256 TLVTTLRNV--SKMRGPTLVHVLTKKGKGHKPAEERPDKFHGVSP------KKLLSEPQP 307

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F++ L+  AE D  +VAI AAM  GTGL+ F  RFP R FDVGIAEQHAVTFAA
Sbjct: 308 PTYTEVFSKTLVEMAEKDSSIVAITAAMPSGTGLDRFAARFPERYFDVGIAEQHAVTFAA 367

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA +GL+P  AIYS+F+QRAYDQ++HDV LQ+LPV FA+DRAGLVG DG TH G+FD++
Sbjct: 368 GLAKKGLRPVVAIYSTFLQRAYDQIIHDVALQELPVTFAIDRAGLVGEDGATHHGAFDLS 427

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++  +PN+VV AP DE EL H++ T A    RP   RYPRG G GV L    K IP  +G
Sbjct: 428 YLRVVPNLVVAAPKDEEELRHLLYT-AVYSGRPFAVRYPRGRGYGVTLREPLKKIP--IG 484

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              +L EG  + +L  G  V   L A+  L + G+  TV +ARF KPLD  L++ LA  H
Sbjct: 485 SWEVLREGGDLLILATGWTVYQALEAARELSAEGIEATVVNARFIKPLDEKLLKELALKH 544

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             +ITVEE ++ GGFGS V +FLA     +G V    L LPD++I+HGS A       + 
Sbjct: 545 STVITVEENAVKGGFGSAVNEFLAL--WYNGRV--FNLGLPDKFIEHGSQALLRKLVKID 600

Query: 538 PSHIAATVFNILG 550
              I  +V  ILG
Sbjct: 601 KDGIKESVREILG 613


>gi|388567038|ref|ZP_10153477.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
 gi|388265743|gb|EIK91294.1| 1-deoxy-d-xylulose-5-phosphate synthase [Hydrogenophaga sp. PBC]
          Length = 635

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/553 (47%), Positives = 352/553 (63%), Gaps = 26/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +R ES YD FGT HSSTSISA LGMA+    KG     VA+IGDGA
Sbjct: 93  MDTLRQLGGISGFPRRDESPYDTFGTAHSSTSISAALGMAMAAKAKGEDRRAVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D  ++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNAGVADGKLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + + K V K    P+ ELA + ++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AAAKHMGKQVLKG-APPLFELAKRFEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTT--GPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +  LE ++       GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++   
Sbjct: 261 IPTLENIRQLMDAHEGPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLTKPATPPK 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            ++T  F + L   A  D+ +V I  AM  G+G+  F RRFP R FDVGIAEQHAVTFAA
Sbjct: 321 TTFTQVFGQWLCDMAAADQRLVGITPAMREGSGMVEFERRFPDRYFDVGIAEQHAVTFAA 380

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLACEGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++DV 
Sbjct: 381 GLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDVA 440

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ C+P + V  P+DE E   +++TA A  + P   RYPRG G+G   P G +G+P   G
Sbjct: 441 YLRCIPQVSVACPADEGECRQLLSTAFA-QNHPVAVRYPRGAGVGAAQPEGLQGLPF--G 497

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  +G  VA+L +GT +   LAA+  L +     +VA+ R+ KPLD  L+R +A++H
Sbjct: 498 KGELRRKGRGVAILAFGTLLYPALAAAERLGA-----SVANMRWVKPLDIELLREIARTH 552

Query: 479 EVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             ++TVEEG ++GG GS V++ L  +GL    +    L LPD +I+HG PA  LA  GL 
Sbjct: 553 VAIVTVEEGCTMGGAGSAVMEALQAEGL---QLPVLALGLPDDFIEHGDPAKLLALQGLD 609

Query: 538 PSHIAATVFNILG 550
            + I  +V    G
Sbjct: 610 AAGIERSVRERFG 622


>gi|337286893|ref|YP_004626366.1| deoxyxylulose-5-phosphate synthase [Thermodesulfatator indicus DSM
           15286]
 gi|335359721|gb|AEH45402.1| deoxyxylulose-5-phosphate synthase [Thermodesulfatator indicus DSM
           15286]
          Length = 634

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/563 (47%), Positives = 352/563 (62%), Gaps = 21/563 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  G++GF KRSES +D    GHSSTSISA LG+   +D   ++  VV VIGDG+
Sbjct: 89  FHTLRQYGGIAGFPKRSESPHDIVDVGHSSTSISAALGLVTAQDFLKQEGKVVVVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+E +NNAG+L  D+IVILNDN ++S+         P VGALSS LSR  +    
Sbjct: 149 MTAGLAFEGLNNAGHLKKDLIVILNDN-EMSIS--------PNVGALSSFLSRKLTGPVA 199

Query: 121 REL-REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           R L RE+   V+   GG     A +  E A   +   G  LFE LG  Y+GP+ GHN++ 
Sbjct: 200 RRLKRELESFVSHLPGGEHLVTAIRKSEDAIKCLLTPG-MLFEALGFRYVGPIPGHNLET 258

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L  VKN +  GP L+HV+T+KG+GY  AE+  +K+HG+  FD  TGK   S  +  
Sbjct: 259 LIDTLRNVKNLE--GPTLVHVLTKKGKGYRPAEEEPEKFHGLGPFDIKTGKPKTSKNKPP 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT+ F++ ++   E++  +VAI AAM  GTGL  F  RFP R FDVGIAEQHAVTFAAG
Sbjct: 317 SYTSVFSKTMVRLGEMEPRLVAITAAMPSGTGLKAFSERFPERFFDVGIAEQHAVTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA  G+ P CAIYS+F+QRA+DQ++HDV L  L V FA+DRAG+VG DGPTH G FD+T+
Sbjct: 377 LALGGMIPVCAIYSTFLQRAFDQIIHDVALTNLHVVFAIDRAGIVGEDGPTHQGQFDLTY 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  +PNM+VMAP DE EL HM+ TA      P   RYPRG G G  L    K IP  +GK
Sbjct: 437 LRLIPNMIVMAPKDENELQHMLYTAVKCQG-PVAVRYPRGAGEGASLDWELKEIP--IGK 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  EGE + L+  G  V   L A+ LL   GL  TV +ARF KPLD  LI   A    
Sbjct: 494 GEIFREGEDILLVAIGNMVYPALKAADLLAKEGLSATVINARFVKPLDEDLITEWALRTG 553

Query: 480 VLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            ++T+EE + +GGFGS V++   Q GL       + + LPD++I+HG+PA    + GLTP
Sbjct: 554 RVVTIEENTLLGGFGSAVLELFQQKGL---RFPVKRIGLPDKFIEHGAPALLREKYGLTP 610

Query: 539 SHIAATVFN-ILGQTREALEIMS 560
             IA  V + +L Q R  + +++
Sbjct: 611 EKIAEEVKDWLLHQERPDIRVLT 633


>gi|404401537|ref|ZP_10993121.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fuscovaginae
           UPB0736]
          Length = 632

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/548 (48%), Positives = 353/548 (64%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MHTLRQKDGLAAFPRRTESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSAVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVG 418
           + C+P M+VM PSDE EL  M++T    +  P+  RYPRG+G      P  K + P+E+G
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLSTGHRYNG-PAAVRYPRGSGPNA---PIEKNLEPIEIG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  +G +VALL +G  +     A AL+ +  L  TV D RF KPLD AL+R +A SH
Sbjct: 504 KGVVRRQGSKVALLVFGVQL-----AEALVVAEKLDATVVDMRFVKPLDEALVREIAGSH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+T+EE +I GG G+ V +FLAQD LL   +    L LPD Y++H  PA  LA+ GL 
Sbjct: 559 ELLVTIEENAIMGGAGAAVSEFLAQDNLLKPILH---LGLPDAYVEHAKPAQMLAECGLD 615

Query: 538 PSHIAATV 545
            + I A+V
Sbjct: 616 VAGIEASV 623


>gi|222110170|ref|YP_002552434.1| 1-deoxy-d-xylulose-5-phosphate synthase [Acidovorax ebreus TPSY]
 gi|254782071|sp|B9MEU8.1|DXS_DIAST RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|221729614|gb|ACM32434.1| deoxyxylulose-5-phosphate synthase [Acidovorax ebreus TPSY]
          Length = 629

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/554 (47%), Positives = 358/554 (64%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    +G +   VA+IGDGA
Sbjct: 93  MPSLRQLGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQRGDERRCVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNAGVADANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R+V K V K    P+ ELA ++++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AKARDVGKSVLKN-APPLLELAKRLEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE ++  K  GP  +HVVT+KG+GY  AE     YHG  KFDP  G    ++   Q+
Sbjct: 261 IPTLENIRGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPRVGLVKPATPPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   AE D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGQWLCDMAEKDERLVGITPAMREGSGMVEFHQRFPERYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGAKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++ TA    D P   RYPRG G+GV   P  +G+P   GKG
Sbjct: 439 RCIPNMSMACPADERECRQLLTTAYE-QDHPVAVRYPRGAGVGVAPLPDLEGLPF--GKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G R+A+L +GT +   L A+  L++     TV + R+ KPLD  L+  +A  H+ 
Sbjct: 496 EVRRKGRRMAILAFGTLLYPALQAAEALDA-----TVVNMRWAKPLDTQLLLQVAAEHDA 550

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+TVEEG I GG GS V + LA  G+       RPL+   LPD +I+HG PA  LA  GL
Sbjct: 551 LVTVEEGCIMGGAGSAVAEALAAAGV------QRPLLQLGLPDAFIEHGDPAKLLALQGL 604

Query: 537 TPSHIAATVFNILG 550
             + +  ++    G
Sbjct: 605 DAAGMQRSITERFG 618


>gi|160897685|ref|YP_001563267.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
 gi|160363269|gb|ABX34882.1| deoxyxylulose-5-phosphate synthase [Delftia acidovorans SPH-1]
          Length = 638

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/554 (48%), Positives = 360/554 (64%), Gaps = 24/554 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GLSGF +R+ES YD FGT HSSTSISA LGMA+    KG     +AVIGDGA
Sbjct: 105 MASLRQFGGLSGFPQRAESPYDTFGTAHSSTSISAALGMALAAKQKGEDRRAIAVIGDGA 164

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 165 MTAGMAFEALNNAGVTDANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 215

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R++ K V KQ+  P+ ELA ++++ A+GM+  +  TLFE  G  YIGP+DGH++D L
Sbjct: 216 AKARDMGKSVLKQVP-PLLELAKRLEQQAKGMVVPA--TLFENFGFNYIGPIDGHDLDSL 272

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDP+ G    ++   Q+
Sbjct: 273 IPTLENIKSLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLVKPATPPKQT 330

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F   L   A+ D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 331 FTQVFGHWLCDMADKDQRLVGITPAMREGSGMVEFHKRFPGRYYDVGIAEQHAVTFAAGM 390

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ++HDV LQKLPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 391 ACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVVFALDRAGLVGADGATHAGAYDIAFV 450

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P+M +  P+DE E   ++ TA    D P   RYPRG G+GV      +G+P   G+ 
Sbjct: 451 RCIPHMSMACPADERECRQLLTTAYE-QDHPVAVRYPRGAGVGVAPLESLEGLPFGKGEV 509

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R     ++VA+L +GT +   LAA+  L++     TV + R+ KPLD  L+R +A +HE+
Sbjct: 510 RRESAKKQVAILAFGTLLYPALAAAEALDA-----TVVNMRWAKPLDEELLRQVASTHEL 564

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++TVEEG I GG GS V + L   G+   T +   L LPD +I+HG PA  LA  GL  +
Sbjct: 565 IVTVEEGCIMGGAGSAVAESLQAAGI---TRQLLQLGLPDEFIEHGDPAKLLALQGLDAA 621

Query: 540 HIAATVFNILGQTR 553
            I A+V   L   R
Sbjct: 622 GIEASVRAHLAPER 635


>gi|411117534|ref|ZP_11390021.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
           cyanobacterium JSC-12]
 gi|410713637|gb|EKQ71138.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoriales
           cyanobacterium JSC-12]
          Length = 636

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 260/563 (46%), Positives = 356/563 (63%), Gaps = 25/563 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KRSES++D FG GH+STSISA LGMA+ RDLKG K  VVAVIGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRSESKFDHFGAGHASTSISAALGMALARDLKGEKFKVVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN+    P          VGA+   L++L+ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKLRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K +      L+  ++    GM    +   G+ +FEELG  Y+GP+DGH
Sbjct: 198 VQFLSDNLEEQLKHLPFVGESLSPDLNRLKEGMKRLAVPKVGA-VFEELGFTYMGPIDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+A  ++    KT GPVL+HV T KG+GY  AE+    YH    F+ ATGK   S+
Sbjct: 257 NLEELIATFQQAH--KTPGPVLVHVATVKGKGYEVAEQDQVGYHAQNPFNIATGKAIPST 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +   Y+  F E L   AE +  V+ I AAM  GTGL++  +R P +  DVGIAEQHAV
Sbjct: 315 KPKPPGYSKVFGETLTKIAENNPKVIGITAAMATGTGLDILQKRLPDQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QRA+DQ+VHDV +QKLPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAAGLACEGMRPVAAIYSTFLQRAFDQIVHDVCIQKLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ C+PNMV+MAP DEAEL  M+ T     D     RYPRGNG GV  P   +G  
Sbjct: 435 YDIAYLRCIPNMVLMAPKDEAELQRMIVTGIEYTDGAIALRYPRGNGYGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PLE+GKG IL  G+ V L+ YG+ V   +  S +L  +G+  TV +ARF KPLD  LI  
Sbjct: 493 PLEIGKGEILRTGDDVLLVAYGSMVYPSMQTSEILHEHGIEATVVNARFAKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    ++T+EEG + GGFGS V + L      D +V    + +PD  +DH SP    A
Sbjct: 553 LAEKIGRVVTLEEGCLPGGFGSAVAEALLD---ADISVSLTRIGVPDILVDHASPDQSKA 609

Query: 533 QAGLTPSHIAATVFNILGQTREA 555
             GLTP+ +A  +       ++A
Sbjct: 610 SLGLTPAQMAERILTKFFSQQQA 632


>gi|300313125|ref|YP_003777217.1| 1-deoxy-D-xylulose-5-phosphate synthase [Herbaspirillum seropedicae
           SmR1]
 gi|300075910|gb|ADJ65309.1| 1-deoxy-D-xylulose 5-phosphate synthase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 621

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 273/560 (48%), Positives = 366/560 (65%), Gaps = 30/560 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +G+SGF +R ES+YD FGT HSSTSISA LGMA+    +G   + +AVIGDGA
Sbjct: 87  MDTLRQQEGISGFPRRIESQYDTFGTAHSSTSISAALGMALAARTQGSDRHAIAVIGDGA 146

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG + D  ++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 147 MTAGMAFEALNNAGVHEDVKLLVILNDN-DMSIS--------PPVGALNRYLARLMSGKF 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R+V K V   + GP+ ELA +++E+A+GM+  +  T+FEE G  YIGP+DGH++D 
Sbjct: 198 YARARDVGKSV---LPGPVLELAKRLEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLDS 252

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K+ K  GP  +HVVT+KG+GY  AE     YHG  KF+P+ G +  S+    
Sbjct: 253 LVPTLQNLKHLK--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPSEGIK-PSAGGKL 309

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F + L   A  D  +V I  AM  G+G+  F ++FP R +DVGIAEQHAVTFAAG
Sbjct: 310 TYTKVFGDWLCDMAAADDKLVGITPAMREGSGMVDFEKKFPNRYYDVGIAEQHAVTFAAG 369

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG+KP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 370 MACEGMKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLAF 429

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M++TA      P+  RYPRG GIG  +    + +PL  G+
Sbjct: 430 LRCIPNMVVMAASDENECRKMLSTAYQYPG-PASVRYPRGAGIGAAVDQTLETLPL--GR 486

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G+ VA+L +G+     L A +L   + L  TVA+ RF KPLD  L++ LA SH+
Sbjct: 487 GEIRRQGKNVAILAFGS-----LLAPSLGAGDKLNATVANMRFIKPLDVELVKQLAASHD 541

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG I GG G+ V + LA  G+    +    L LPDR+IDHG  A  LAQ GL  
Sbjct: 542 ALVTVEEGCIMGGAGAAVSEALAAAGINKPILH---LGLPDRFIDHGDAAQLLAQCGLDA 598

Query: 539 SHIAATVFNILGQTREALEI 558
           + IA ++    G+ +  L +
Sbjct: 599 NGIADSIAQRFGKDQPKLVV 618


>gi|344199834|ref|YP_004784160.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrivorans SS3]
 gi|343775278|gb|AEM47834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrivorans SS3]
          Length = 624

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/543 (49%), Positives = 353/543 (65%), Gaps = 33/543 (6%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +R  DGLSGF KR ES YD FG GHSSTSISA LGMAV   L  +   VVA+IGDGAMTA
Sbjct: 92  LRIKDGLSGFLKRDESPYDSFGAGHSSTSISAALGMAVAAKLGHKSREVVAIIGDGAMTA 151

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 123
           G AYEA+NN G LD++++VILNDN ++S+         P VGA+S  L+R+ S R    +
Sbjct: 152 GLAYEALNNGGVLDANLLVILNDN-EMSIS--------PNVGAVSQYLTRILSGRLYNTV 202

Query: 124 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 183
           RE A G       P+ ELA K +E  +G+++    TLFEE+G +Y GP+DGH++D L+  
Sbjct: 203 REGA-GQALSFVPPLRELAKKAEEGVKGLVAPG--TLFEEMGFHYFGPIDGHDLDTLIQT 259

Query: 184 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 243
           LE +K  K  GP L+HV+T+KG+GY  AE+    YHGV  F+   GK  K SA   SYT 
Sbjct: 260 LENLK--KIRGPRLLHVITKKGKGYGPAEQDPCGYHGVTPFNQTDGKMAKKSAGAASYTQ 317

Query: 244 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 303
            F + L  +   +K +VAI  AM  G+GL  F + FP R FDVGIAEQHAVTFAAGLAC+
Sbjct: 318 VFGDWLCDKGAAEKQLVAITPAMREGSGLVRFAQLFPERYFDVGIAEQHAVTFAAGLACD 377

Query: 304 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 363
           G+ P  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADG TH G+FD+ +  C+
Sbjct: 378 GIHPVVAIYSTFLQRAYDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDMAYARCI 437

Query: 364 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG-NKGIPLEVGKGRI 422
           PN+V+MAP DE E+  M+ T  A    P+  RYPRGNG G+ L    ++ IP  +G+  +
Sbjct: 438 PNLVIMAPKDEQEMRDMLNTGFAYQG-PALVRYPRGNGRGLALDKDLSRQIP--IGRAEV 494

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
           L EG+ +A+L +GT   + + A A L++     TV + RF KPLD  L+ SLA+SH   +
Sbjct: 495 LREGKELAILAFGTRAAAAMVAGAALDA-----TVVNMRFVKPLDTELLTSLAQSHRAFL 549

Query: 483 TVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGLTP 538
           TVEEGS +GG GS V +FL  +G++      RPL L   PD +I+ G  +  LA  GL  
Sbjct: 550 TVEEGSRMGGAGSAVAEFLLNEGVV------RPLRLLGFPDTFIEQGDASQWLADLGLDA 603

Query: 539 SHI 541
           + I
Sbjct: 604 AGI 606


>gi|383754045|ref|YP_005432948.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas
           ruminantium subsp. lactilytica TAM6421]
 gi|381366097|dbj|BAL82925.1| putative 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas
           ruminantium subsp. lactilytica TAM6421]
          Length = 625

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/550 (47%), Positives = 349/550 (63%), Gaps = 25/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  G++GF  R ES+YD FG GH+STSISA LGMA+ RDL GRKN V+AVIGDGA
Sbjct: 91  FHTLRQKGGITGFPNRFESDYDAFGVGHASTSISAALGMAISRDLSGRKNEVIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRL----QS 116
           +T G+A+EA+N+AG L   +IVILNDN+       ++D     VG LS  LSR+    Q 
Sbjct: 151 LTGGEAFEALNHAGDLGKKIIVILNDNEM------SID---KNVGGLSEYLSRIRITPQY 201

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           N+  +++  +   +   IG      A  V +  R  +   G  +FEELG +YIGPVDGHN
Sbjct: 202 NKAKKDMGSLLMSIP-HIGDKAFRTAQVVKDSVRAALVPGG--IFEELGFHYIGPVDGHN 258

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L  ILE  +  + +GPVLIH+ T KG+GY  AE   DK+HG+ KF+  TGK      
Sbjct: 259 ISLLQEILESAR--EMSGPVLIHIHTTKGKGYAPAEMEPDKFHGIGKFNKETGKCLPKEG 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F++ALI  A+ D ++ AI AAM  GTGL  F + +P R FDVGIAE+HAVT 
Sbjct: 317 -APSYTSVFSKALIELADKDSNITAITAAMPSGTGLKAFGQEYPARFFDVGIAEEHAVTL 375

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+A +G  P  A+YS+F QRAYDQ++HDV LQ LPV   +DRAGLVGADGPTH G+FD
Sbjct: 376 AAGMAADGKHPVVALYSTFAQRAYDQLMHDVCLQNLPVTLCLDRAGLVGADGPTHHGAFD 435

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           ++++  +PNM V  P DEAEL  M+ATA  ++  P+  RYPRGNG GVEL  G   IP  
Sbjct: 436 LSYLRHMPNMTVFVPKDEAELRDMLATAVKMES-PTAVRYPRGNGQGVELQAGFNDIP-- 492

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
            GK  +L +G  VA+L  G      LAA+ LL+  G+   V + RF KPLD  +I+ L +
Sbjct: 493 AGKAELLRDGSDVAILALGPITYKALAAAKLLQQQGISAAVVNMRFAKPLDTEMIQRL-R 551

Query: 477 SHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
             ++L+TVEE S +GGFGS + ++L   GL   +V    L LPDR+++ G+  + L    
Sbjct: 552 HVQLLVTVEENSLVGGFGSGMAEYLTDSGLAR-SVDLLRLGLPDRFVEQGTQEELLTLCS 610

Query: 536 LTPSHIAATV 545
           L P  +A  +
Sbjct: 611 LQPEQMAERI 620


>gi|445494923|ref|ZP_21461967.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
           HH01]
 gi|444791084|gb|ELX12631.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Janthinobacterium sp.
           HH01]
          Length = 623

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 263/546 (48%), Positives = 350/546 (64%), Gaps = 27/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ +G+SGF KR ESEYD FGT HSSTSISA LGMA    +KG   + +AVIGDG+
Sbjct: 88  MHTLRQLNGISGFPKRDESEYDTFGTAHSSTSISAALGMAQAAKIKGEHRHAIAVIGDGS 147

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG   D +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 148 MTAGMAFEALNNAGVQEDLNLLVILNDN-DMSIS--------PPVGALNRYLARLMSGQF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V   + GP+ ELA +++E+A+GM+  +  T+FEE G  YIGP+DGH+++ 
Sbjct: 199 YAAAKNVGKSV---LPGPVLELAKRLEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLES 253

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  K  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  ++    
Sbjct: 254 LVPTLQNIKQLK--GPQFLHVVTKKGQGYKLAEAEPVLYHGTPKFNPAEGIKPAAAPGKM 311

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F   L   A  DK +V I  AM  G+G+  F + +P R FDVGIAEQHAVTF AG
Sbjct: 312 SYTDVFGNWLCDMAAADKKLVGITPAMREGSGMVRFEQEYPDRYFDVGIAEQHAVTFGAG 371

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEGLKP  AIYS+F+QR YDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ +
Sbjct: 372 LACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLAY 431

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M++T       P+  RYPRG G G  + P  +   +E+GK
Sbjct: 432 LRCIPNMVVMAASDENECRQMLSTGYHYKG-PAAIRYPRGAGAGAAIQP--ELTTIEIGK 488

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G+++A+L +G+ V    AA   L++     TVA+ RF KPLD  L++ LA  ++
Sbjct: 489 GEIKRKGQKIAILAFGSMVAPATAAGEALDA-----TVANMRFIKPLDVELVKQLAAEYD 543

Query: 480 VLITVEEGSIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
            L+TVEEG I G     V        +   ++   L LPD++IDHG PA  LA  GL  +
Sbjct: 544 YLVTVEEGCIMGGAGAAVAEALAAEGIVKPLQM--LGLPDKFIDHGDPAKLLASVGLDAA 601

Query: 540 HIAATV 545
            I A++
Sbjct: 602 GITASI 607


>gi|33593754|ref|NP_881398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis
           Tohama I]
 gi|384205042|ref|YP_005590781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis CS]
 gi|408414646|ref|YP_006625353.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis
           18323]
 gi|41016953|sp|Q7VV87.1|DXS_BORPE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|33563827|emb|CAE43071.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella pertussis
           Tohama I]
 gi|332383156|gb|AEE68003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella pertussis CS]
 gi|401776816|emb|CCJ62055.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella pertussis
           18323]
          Length = 620

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/543 (49%), Positives = 353/543 (65%), Gaps = 27/543 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +AVIGDGA
Sbjct: 90  MAHLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVTPNINLLVVLNDND-MSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA +++E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAVLQHVP-PVLELARRLEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ ++     G   +HVVT KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLR--ALPGLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQQAKAPARK 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F + L   AE D+ +V I  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFGQWLCDMAERDERLVGITPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QR YDQ+VHDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 376 LACEGQKPVVAIYSTFLQRGYDQLVHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV APSDE+E   +++T       P+  RYPRG G G  +  G   +PL  GK
Sbjct: 436 LRCVPNMVVAAPSDESEARLLLSTCYE-HPGPASVRYPRGAGCGAAVGEGLATVPL--GK 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  EG R+A+LG+GT VQ+ L A+  +++      VAD RF KPLD  L+  LA  H+
Sbjct: 493 GLVRREGRRIAILGFGTLVQAALGAAGQIDA-----MVADMRFVKPLDRELVLELAARHD 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEE +I GG GS V++ LA+ G+   T+    L LPD +IDHG  A  LA  GL  
Sbjct: 548 ALVTVEEAAIMGGAGSAVLETLAEAGV---TLPVLQLGLPDAFIDHGDQAALLAGLGLDA 604

Query: 539 SHI 541
           + I
Sbjct: 605 AGI 607


>gi|395005696|ref|ZP_10389565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
 gi|394316252|gb|EJE52982.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. CF316]
          Length = 627

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/554 (47%), Positives = 359/554 (64%), Gaps = 34/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+T+RQ  G+SGF +R+ES YD FGT HSSTSISA LGMA+   +KG   + VA+IGDGA
Sbjct: 93  MNTLRQMGGISGFPQRAESPYDTFGTAHSSTSISAALGMALAAKVKGENRHAVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NN G  D++++V+LNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNGGVADANLLVVLNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V + +  P+ ELA + ++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AAAKNVGKTVLRPVP-PLLELAKRFEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    +++  Q+
Sbjct: 261 IPTLENIKSLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKGTASPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L      D+ +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGQWLCDMGAHDQRLVGITPAMREGSGMVEFEKRFPERYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   +++TA    D P   RYPRG+G GV    G +G+P   GKG
Sbjct: 439 RCIPNMSMACPADERECRQLLSTAFE-QDHPVAVRYPRGSGAGVAPLAGLEGLPF--GKG 495

Query: 421 RILIE--------GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
            I  E        G R+A+L +GT +   L A   L++     TVA+ R+ KP+D  L+R
Sbjct: 496 EIRRERKAAAGEAGPRIAILAFGTLLYPALEAGEALDA-----TVANMRWAKPVDVELLR 550

Query: 473 SLAKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            +A+ H+VL+TVEEG ++GG GS V + L   G++   ++   L LPD +I+HG PA  L
Sbjct: 551 DVAERHDVLVTVEEGATMGGAGSAVTEALNAAGIVRPVLQ---LGLPDAFIEHGDPAKLL 607

Query: 532 AQAGLTPSHIAATV 545
           +  GL  + I   V
Sbjct: 608 SLQGLDAAGIERAV 621


>gi|385810711|ref|YP_005847107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ignavibacterium album JCM
           16511]
 gi|383802759|gb|AFH49839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ignavibacterium album JCM
           16511]
          Length = 648

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/563 (44%), Positives = 351/563 (62%), Gaps = 23/563 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKN-NVVAVIGDG 59
           +  +R+  G+SGF KR+ESEYD FG GH++TSISA LGMAVGRDL    N  V+A+IGDG
Sbjct: 102 LKRIRKFGGISGFLKRTESEYDAFGAGHATTSISAALGMAVGRDLNNESNRKVIAIIGDG 161

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           AMT G AYEAMNN+G L SD+IV+LNDN+    P          V  +S+  + + S+  
Sbjct: 162 AMTGGMAYEAMNNSGVLKSDLIVVLNDNRMSIAPN---------VWQISNYFTEMISHPD 212

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
             + +     +T ++   G  + ++AA+++   + +++     LFE LG  Y GPV+GHN
Sbjct: 213 YNKFKAQIWDLTGKLDAFGDRLRKIAARLESGIKAVVTPG--MLFEALGFRYFGPVNGHN 270

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ I E VK  K  GP+LIH +TEKG+GY  AE    + H    FD  TGK +K   
Sbjct: 271 LHQLIRIFEHVKTLK--GPILIHAITEKGKGYKPAEGHIQRLHASTPFDKLTGKAYKKEG 328

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              +YTT F  AL+   + +  VV I  AM  GTGL++  + FP   FDVGIAE+HAVTF
Sbjct: 329 APPAYTTIFGNALVEIVKQNPKVVGITGAMPDGTGLDILQKEFPKNYFDVGIAEEHAVTF 388

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA +G+ P  AIYS+F+QRA+DQ++HDV LQKL V F MDRAGLVGADGPTH G+FD
Sbjct: 389 AAGLATQGIIPVVAIYSTFLQRAFDQIIHDVALQKLHVVFVMDRAGLVGADGPTHHGAFD 448

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           V+++  +P MV+MAP DEAEL +M+ TA      P   RYPRG+ +GVE+ PG + I  E
Sbjct: 449 VSYLRFIPGMVIMAPKDEAELRNMLYTAVEYKKGPIALRYPRGSALGVEVKPGFEKI--E 506

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GK   L  G+ VALL +G+ V   + AS  LE+ G+   V + RF KPLD  L+  ++ 
Sbjct: 507 IGKAETLKSGDDVALLAFGSMVNYAMIASEKLEAQGIHAEVINMRFAKPLDTNLLDDVST 566

Query: 477 SHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
             + ++T+EE S IGGFGS ++++ A+    +  ++   + LPD+++DHG+  +     G
Sbjct: 567 RFKKIVTLEENSIIGGFGSGILEYFAEKNYKNDLLR---IGLPDKFVDHGTQEELHKMLG 623

Query: 536 LTPSHIAATVFNILGQTREALEI 558
           + P  I   V + +   +   E+
Sbjct: 624 IDPDGIVNQVIHFIEIKKSKEEV 646


>gi|319792407|ref|YP_004154047.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS]
 gi|315594870|gb|ADU35936.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus EPS]
          Length = 618

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/551 (47%), Positives = 355/551 (64%), Gaps = 26/551 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+    KG     VA+IGDGA
Sbjct: 89  MPTLRQIGGISGFPQRSESEYDTFGTAHSSTSISAALGMAMAAKQKGEDRYTVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+NNAG  D  ++VILNDN  +S+         PPVGAL+  L++L S    
Sbjct: 149 LTAGMAFEALNNAGVCDCKLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGNFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V +    P+ ELA + +++A+GM+  +  TLFE+ G  Y+GP+DGH++D L
Sbjct: 200 AAAKNVGKSVLRA-APPLFELAKRFEQHAKGMVVPA--TLFEQFGFNYVGPIDGHDLDSL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  LE +K+   +GP  +HVVT+KG+GY  AE     YHG  KFDP  G    ++   Q+
Sbjct: 257 VPTLENLKHL--SGPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPQVGLVKSTTVAKQT 314

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D  +V I  AM  G+GL  F +RFP R +DVGIAEQHAVTFAAGL
Sbjct: 315 FTQVFGQWLCDTAAHDGRLVGITPAMREGSGLVEFEQRFPDRYYDVGIAEQHAVTFAAGL 374

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 375 ACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFALDRAGLVGADGATHAGAYDIPFL 434

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE EL  ++ T+A   + P   RYPRG G GV        +PL  GKG
Sbjct: 435 RCIPNMSIACPADERELRQLL-TSAYEQNHPVAVRYPRGAGAGVAPHLTLDALPL--GKG 491

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG+R+A+L +G+ +   L A+  L++     TV + R+ KPLD  L+  +A +H+ 
Sbjct: 492 EVRREGKRIAILAFGSLLYPALTAAESLDA-----TVVNMRWAKPLDVELLLQVAGTHDA 546

Query: 481 LITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EEG ++GG GS V++ L    +    ++   L LPDR+I+HG PA  LA  GL  +
Sbjct: 547 IVTLEEGATMGGAGSAVLEALQAANVQKPVLQ---LGLPDRFIEHGDPAKLLASIGLDAT 603

Query: 540 HIAATVFNILG 550
            IAA++    G
Sbjct: 604 GIAASITQRFG 614


>gi|334341585|ref|YP_004546565.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum ruminis DSM
           2154]
 gi|334092939|gb|AEG61279.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum ruminis DSM
           2154]
          Length = 636

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/551 (48%), Positives = 351/551 (63%), Gaps = 27/551 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  G+SGF +  ES +D FGTGHSSTSISA LGMA+ RDLKG + +VVAVIGDG+MT
Sbjct: 91  TLRQYGGISGFPRPDESVHDAFGTGHSSTSISAALGMALARDLKGEEYSVVAVIGDGSMT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN-RPLR 121
            G A+EA+N+AG+L  ++IV+LNDN+    P          VGALS  LSRL+++ +  R
Sbjct: 151 GGMAFEALNHAGHLQKNLIVVLNDNEMSIAPN---------VGALSGYLSRLRTDPKYYR 201

Query: 122 ELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHNV 177
              E+A  + K   G   +L   VD    G+    + G     FEELG  Y+GPVDGH++
Sbjct: 202 SKDEIADLLHKIPHGA--KLLKVVDRLKDGLKYLVVPG---MFFEELGFTYLGPVDGHDL 256

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             ++ +L++ K+    GPVL+HV+T+KGRGY  AE   D++HGV  FD  TG   K+   
Sbjct: 257 KAVMTLLQQAKSA--NGPVLVHVLTQKGRGYKPAESNPDRFHGVGPFDVETGNIKKAEGG 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F + L+  A  ++ +V I AAM GGTGLNLF + +P R FDVGIAEQHA+T A
Sbjct: 315 PPSYTEVFGKTLVKLARDNEKIVGITAAMPGGTGLNLFAKEYPARYFDVGIAEQHAITMA 374

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA  G +P  AIYS+FMQRAYDQV+HDV LQ LPV FA+DRAGLVG DGPTH G FD+
Sbjct: 375 AGLAASGYRPVTAIYSTFMQRAYDQVLHDVCLQNLPVTFALDRAGLVGDDGPTHHGVFDL 434

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +F+  +PN+V++AP DE EL H + T A +   P   RYPRG G G+EL    K +PL  
Sbjct: 435 SFLRNIPNLVIVAPKDENELQHALHT-AILHPGPMAVRYPRGAGTGIELDRELKALPL-- 491

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG +L +GE V LL  G  V+  L A+  L + G+R  V + RF KPLD  LI + A+ 
Sbjct: 492 GKGEVLRKGEDVLLLAVGNLVEEALKAADALAAEGVRAAVVNPRFIKPLDRELILTYARL 551

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              ++T+EE  + GGFGS V++ L   GL D  VK   L +PD +++HG P    A  GL
Sbjct: 552 TRNVVTIEEHVLMGGFGSAVLELLESAGLADCKVKR--LGIPDSFVEHGKPGILKANLGL 609

Query: 537 TPSHIAATVFN 547
               I  TV N
Sbjct: 610 NAEEIVKTVLN 620


>gi|237747172|ref|ZP_04577652.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           HOxBLS]
 gi|229378523|gb|EEO28614.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oxalobacter formigenes
           HOxBLS]
          Length = 615

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/553 (47%), Positives = 354/553 (64%), Gaps = 30/553 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +G+SGF KR ES+YD FGT HSSTSISA LGMA+   LK      +AVIGDGA
Sbjct: 88  MKTLRQLNGISGFPKRDESQYDAFGTAHSSTSISAALGMALAARLKNENYTSIAVIGDGA 147

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A+EAMNN G Y D +++VILNDN  +S+         P VGAL+S  +RL S + 
Sbjct: 148 ITGGMAFEAMNNVGMYNDINLLVILNDN-DMSIS--------PAVGALNSYFARLMSGKF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V +   GPM E+A + +E+A+G+I+ +  TLFEE G  Y+GP+DGH+++ 
Sbjct: 199 YATAKNVGKTVLR---GPMLEIAKRFEEHAKGLIAPA--TLFEEFGFNYVGPIDGHDLES 253

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  K  GP  +H+VT+KG GY  AE     YHG+ KF P  G +  +     
Sbjct: 254 LIPTLQNLKERK--GPQFLHIVTKKGHGYKLAEADPVLYHGLGKFSPEEGIK-PAPVSKP 310

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +Y   F   L   A V++ +V I  AM  G+G+  F + +P R FDVGIAEQHAVTFAAG
Sbjct: 311 TYAEIFGNWLCDTAAVNQKLVGITPAMREGSGMVRFAKTYPDRFFDVGIAEQHAVTFAAG 370

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ +
Sbjct: 371 LACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDMAY 430

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMV+MAPSDE E   M+ T A + + P+  RYPRG G+G  +    +  PL +GK
Sbjct: 431 LRCIPNMVIMAPSDENEARQML-TTAFLYNGPASVRYPRGAGVGKAV--HQELSPLPIGK 487

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +L  G+ +A+L +GT V S L+A   L +     TV + RF KPLD AL+  +A++H 
Sbjct: 488 GEVLRRGQNIAILAFGTMVASSLSAGEELNA-----TVINMRFVKPLDKALVLEIAQTHP 542

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG+I GG GS V++ LA + + +  +    L LPD++IDHG     LA   L  
Sbjct: 543 FLVTVEEGTISGGAGSAVMETLAAEKMANPVLL---LGLPDKFIDHGDVNQLLAMHNLDK 599

Query: 539 SHIAATVFNILGQ 551
             I  ++    G+
Sbjct: 600 DGIITSIRKRFGK 612


>gi|225848429|ref|YP_002728592.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643052|gb|ACN98102.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 632

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/561 (45%), Positives = 357/561 (63%), Gaps = 24/561 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
             T+RQ  G+SGF+K  ES+YD FGTGHSSTSISA LGM VG+DLKG ++  +AVIGDGA
Sbjct: 92  FKTLRQYKGISGFSKIKESKYDHFGTGHSSTSISAALGMRVGKDLKGDESYTIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAGQA+E +NNAG+LD S  IVILNDN Q+S+         P VGA+ +  +++ + + 
Sbjct: 152 MTAGQAFEGLNNAGWLDPSRFIVILNDN-QMSIS--------PNVGAIYTYFNKIITKQV 202

Query: 120 LRELREVAK-GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++ R+  K  + K  G    ++  K++EY +G+ +     +FEELG  Y+GP+DGH++ 
Sbjct: 203 FQKPRQKLKEAINKIFGDQGVKIFRKIEEYTKGLFAPG--IIFEELGFTYVGPIDGHSLF 260

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           DL   LE VK+ +  GP+LIHV+T+KG+GY +AE+    +HGV+ FD  +G  F  ++  
Sbjct: 261 DLEQTLENVKSMR--GPILIHVITQKGKGYKFAEENPVVFHGVSPFDKISG-IFNKTSTA 317

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SY+  F +AL+  AE D+ +VAI  AM  G+GL  F +RFP R FDVGIAEQHA TFA 
Sbjct: 318 PSYSKVFGDALVELAEKDEKIVAITPAMKEGSGLVEFAKRFPNRFFDVGIAEQHAATFAG 377

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA EG KP  A YS+F+QRAYDQV+HD+ LQ+LPV FA+DR GLVG DGPTH G FD+ 
Sbjct: 378 GLALEGFKPVAAYYSTFLQRAYDQVIHDIALQELPVLFAIDRGGLVGDDGPTHHGVFDIA 437

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  +PN+++ AP DE EL   + T      +    RYPRGNG GV+L    +   +++G
Sbjct: 438 FLRLVPNIIIAAPKDEQELRDFLYTGLN-SGKTFALRYPRGNGYGVKLEDFKE---IKIG 493

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
               L+ G  VA+L  G  V   L     L+  G   TV +ARF KP+D  L++ + K+H
Sbjct: 494 SWEELVSGRDVAILAVGKYVYRALEVKKNLKLKGFNPTVINARFIKPMDEELLKRVLKTH 553

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E +IT+E+G + GGFGS V +++  +G  +  +++    +PDR+I+HG         GL 
Sbjct: 554 EFIITMEDGVLNGGFGSAVAEYILDNGFSNKLLRFG---IPDRFIEHGKVEILEKDLGLD 610

Query: 538 PSHIAATVFNILGQTREALEI 558
            S +   +   + + + AL I
Sbjct: 611 ISSMTDKISEFIVKKQPALNI 631


>gi|91787629|ref|YP_548581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
 gi|118595599|sp|Q12CQ9.1|DXS_POLSJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91696854|gb|ABE43683.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. JS666]
          Length = 635

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/555 (48%), Positives = 354/555 (63%), Gaps = 33/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GLSGF +R ES YD FGT HSSTSISA LGMA+    +G   + VA+IGDGA
Sbjct: 89  MGSLRQFGGLSGFPRRDESPYDTFGTAHSSTSISAALGMALAAHQQGEDRHAVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EA+NNAG + D  ++V+LNDN  +S+         PPVGAL+  L++L S R 
Sbjct: 149 MSAGMAFEALNNAGVHDDCKLLVVLNDN-DMSIS--------PPVGALNRYLAQLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V + +  P+ ELA +++ +A+GM+  +  TLFE  G  YIGP+DGH+++ 
Sbjct: 200 YASAKNVGKQVLR-VAPPLLELAKRLEAHAKGMVVPA--TLFENFGFNYIGPIDGHDLES 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G Q  S+   +
Sbjct: 257 LIPTLENIKHLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAMGLQKSSAPAKR 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F + L   AE DK +V I  AM  G+G+  F +RFP R  DVGIAEQHAVTFAAG
Sbjct: 315 TFTQVFGQWLCDMAEQDKRLVGITPAMREGSGMVEFHKRFPGRYHDVGIAEQHAVTFAAG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 MACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM V  P+DE E   ++++A    + P   RYPRG G GVE  PG +  PL  GK
Sbjct: 435 LRCIPNMSVACPADENECRKLLSSAFE-QNHPVAVRYPRGAGAGVEPEPGLQ--PLPFGK 491

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  EG  VA+L +GT +   L A     +  L +TV + R+ KPLD  L+  +A SHE
Sbjct: 492 GEIRREGSGVAILAFGTLLYPALQA-----AEKLGVTVVNMRWAKPLDTELLLKVAASHE 546

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAG 535
            L+T+EEG+I GG GS V + L   GL       +PL+   L D +I+HG PA  LA  G
Sbjct: 547 ALVTLEEGAIMGGAGSAVGEALQAAGL------GKPLLQLGLKDEFIEHGDPAKLLALQG 600

Query: 536 LTPSHIAATVFNILG 550
           L  + I A V    G
Sbjct: 601 LDAAGIEAAVMARFG 615


>gi|390949923|ref|YP_006413682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocystis violascens DSM
           198]
 gi|390426492|gb|AFL73557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiocystis violascens DSM
           198]
          Length = 650

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 272/547 (49%), Positives = 350/547 (63%), Gaps = 28/547 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G SGF KRSES YD FG GHSSTSISA LGMA+    +G +  VVAVIGDGA
Sbjct: 103 MSCLRQKGGPSGFPKRSESAYDTFGVGHSSTSISAALGMALAAKQRGERRTVVAVIGDGA 162

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           + AG A+EA+N+AG +D D++VILNDN ++S+         PPVGA+S+ L+RL S +  
Sbjct: 163 LGAGMAFEALNHAGSMDIDLVVILNDN-EMSIS--------PPVGAISNHLARLLSGKLY 213

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             +RE +K  T   G P +  L  + +E+ +GM+  S  TLFEELG  YIGP+DGH++D 
Sbjct: 214 TSVREGSK--TALAGLPHLRHLVGRWEEHMKGMVMPS--TLFEELGFNYIGPIDGHDLDS 269

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           ++  L  VK     G  L+HVVT KG GY  AE     YHGV  FD  TG+  K  +   
Sbjct: 270 VIKTLRNVKGMP--GQRLLHVVTHKGHGYEPAEGQPTTYHGVTPFDRRTGELRKGKSNGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F + L   AE D  +V I  AM  G+GL  F +RFP R FDVGIAEQHAVT AAG
Sbjct: 328 SYTQIFGDWLCDAAEQDPRLVGITPAMCEGSGLTAFAKRFPDRFFDVGIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEGLKP  AIYSSF+QRAYDQ +HDV LQ L V FA+DR GLVG DG TH GSFD++F
Sbjct: 388 MACEGLKPVVAIYSSFLQRAYDQFIHDVCLQDLDVTFAVDRGGLVGPDGATHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
              +P ++++APS+E E   M+ TA   +  P+  RYPRG G GV + P     P  +G+
Sbjct: 448 CRPIPKLIILAPSNENECRRMLRTAYEYEG-PAMVRYPRGCGPGVVIDPDAPVFP--IGR 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G ++  G RVALL +G+ V   L A+  L++     TVA+ RF KPLD +LI  LA+ H+
Sbjct: 505 GEVIRRGRRVALLAFGSMVTPALEAAVSLDA-----TVANMRFVKPLDESLILELAQGHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG GS V + L+  GL    V+   L LPDRYI+H   A+QLA  GL  
Sbjct: 560 LLVTIEENAIAGGAGSAVSESLSARGL---AVRCLHLGLPDRYIEHAEHAEQLAICGLDA 616

Query: 539 SHIAATV 545
           + I A+V
Sbjct: 617 AGIVASV 623


>gi|329908092|ref|ZP_08274827.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546762|gb|EGF31698.1| 1-deoxy-D-xylulose 5-phosphate synthase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 616

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/555 (48%), Positives = 354/555 (63%), Gaps = 35/555 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DG+SGF +R+ESEYD FGT HSSTSISA LGMA+    KG   + VA+IGDGA
Sbjct: 88  MHTLRQRDGISGFPRRAESEYDTFGTAHSSTSISAALGMALAARTKGENRHAVAIIGDGA 147

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG  +EAMNNAG Y D +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 148 MTAGMVFEAMNNAGVYDDINLLVILNDN-DMSIS--------PPVGALNQYLARLMSGKF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R V K V   +  P+ ELA + +E+A+GM+  +  T+FEE G  YIGP+DGH++D 
Sbjct: 199 YAAARNVGKSV---LPAPVLELAKRFEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLDA 253

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K+ K  GP  +HVVT+KG+GY  AE     YHG  KF+P  G +  +     
Sbjct: 254 LIPTLQNLKHLK--GPQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPEVGIKPATVPAKM 311

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F + L   A  DK ++ I  AM  G+G+  F ++FP R FDVGIAEQHAVTFAAG
Sbjct: 312 TYTQVFGDWLCDMAAQDKRLIGITPAMREGSGMVRFEQQFPARYFDVGIAEQHAVTFAAG 371

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EGLKP  AIYS+F+QR YDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 372 MATEGLKPVLAIYSTFLQRGYDQLIHDVALQDLDVTFALDRAGLVGADGATHAGNYDMAF 431

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M+ T   +   P+  RYPRG G GV +      +P+  GK
Sbjct: 432 LRCIPNMVVMAASDENECRQML-TTGYLYPGPAAVRYPRGAGPGVAITAPLTALPM--GK 488

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
             +  +GERVA+L +GT V   L A   L +     TV + RF KPLD  L+R LA +H+
Sbjct: 489 AEVRRQGERVAILAFGTMVAPSLVAGERLNA-----TVVNMRFVKPLDVELVRELALTHD 543

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAG 535
            ++TVEEG++ GG GS V + LA  G++      RP++   LPD++IDHG     LA  G
Sbjct: 544 AIVTVEEGALMGGAGSAVAEALAAAGMV------RPILHLGLPDQFIDHGDVGQLLAGVG 597

Query: 536 LTPSHIAATVFNILG 550
           L    I  +V    G
Sbjct: 598 LDAEGIVRSVQQRFG 612


>gi|260220842|emb|CBA28812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 631

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/552 (48%), Positives = 349/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GLSGF +R ESEYD FGT HSSTSISA LGMA+   +KG     VAVIGDGA
Sbjct: 96  MDSLRQFGGLSGFPRRDESEYDTFGTAHSSTSISAALGMALASRIKGEDRYSVAVIGDGA 155

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D  ++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 156 MTAGMAFEALNNAGVEDCRLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 206

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V K    P+ ELA +++E A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 207 AAAKSVGKSVLKG-APPLFELAKRLEEQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 263

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++    +
Sbjct: 264 IPTLENIKQLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKSTTPAKTT 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D+ +V I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA GL
Sbjct: 322 FTQVFGQWLCDMAAADERLVGITPAMREGSGMVEFEKRFPQRYFDVGIAEQHAVTFAGGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 382 ATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFL 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM V  P+DE E   +++TA A  + P   RYPRG+G GV +    +G+P   GKG
Sbjct: 442 RCIPNMSVACPADENECRQLLSTAYA-QNHPVAVRYPRGSGAGVAVSSSLEGLPF--GKG 498

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +G  +A+L +GT     L   AL+ +  L  TV + R+ KPLD  L+  +A +H  
Sbjct: 499 EIRKQGGNIAILAFGT-----LLYPALVAAEALGATVVNMRWAKPLDTELLLQVAATHSA 553

Query: 481 LITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEEG ++GG GS V++ L    L   ++    L L D +I+HG PA  L   GL  +
Sbjct: 554 LVTVEEGATMGGAGSAVLEALQAAKL---SIPVLQLGLADEFIEHGDPAYLLQMQGLDAA 610

Query: 540 HIAATVFNILGQ 551
            I A+V    G 
Sbjct: 611 GIQASVRQRFGH 622


>gi|322420928|ref|YP_004200151.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
 gi|320127315|gb|ADW14875.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M18]
          Length = 635

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/548 (48%), Positives = 349/548 (63%), Gaps = 24/548 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT R   G+SGF KRSES +D FG GHSSTSISAGLG+AV   LKG    V++VIGDG+
Sbjct: 89  FHTQRCYKGISGFPKRSESPHDAFGAGHSSTSISAGLGLAVAHTLKGDDARVISVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G A EA+N AG+L  +MIV+LNDN ++S+           VGALSS +SR  +    
Sbjct: 149 LTGGMALEALNQAGHLKKNMIVVLNDN-EMSISKN--------VGALSSFISRKMTGTYY 199

Query: 121 RELREVAKGV---TKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           R L++  +G+      IG  +   A K +   +G ++    TLFE LG  Y+GP+ GH++
Sbjct: 200 RSLKKEMEGLLAGIPAIGCNILHFAKKAENSLKGFLTPG--TLFEALGFEYVGPIAGHDI 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ +LE VK  K  GP+L+HV+T+KG+G+P AE   DK+HGVA   PA+    K    
Sbjct: 258 PTLIGVLENVK--KLEGPILVHVMTKKGKGHPPAENMPDKFHGVAPTKPASATSAKQPP- 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT+ F + L+   E D  ++AI AAM  GTGL  F  RFP R FDVGIAEQHA+TFA
Sbjct: 315 -PSYTSVFGDTLVKLGEKDPKILAITAAMPDGTGLTPFADRFPDRFFDVGIAEQHALTFA 373

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA EG +P  AIYS+F QRAYDQV HD+ LQKLPV  A+DRAGLVG DGPTH G+FD+
Sbjct: 374 AGLAAEGFRPVAAIYSTFTQRAYDQVFHDICLQKLPVTLALDRAGLVGDDGPTHHGAFDI 433

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +++  LP + VMAP DE EL HM+ T A    RP   RYPRG G GV +    K   LE+
Sbjct: 434 SYLRHLPELTVMAPKDENELQHMLKT-AIYHGRPISLRYPRGAGFGVTMEKELKA--LEI 490

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG +L+EG  + L+  G+ V   L A+ALL+  G+  +V +ARF KPLD  LI S A  
Sbjct: 491 GKGELLVEGSDLTLVAIGSTVYPALEAAALLKQKGIFASVVNARFIKPLDRELILSEASR 550

Query: 478 HEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              ++TVEE + +GGFGS V++ +A  GL    V+ + + +PD +I+ G+ +   A  GL
Sbjct: 551 TGCMVTVEENALLGGFGSAVLEAVADAGLTG--VRMKRIGIPDSFIEQGTQSQLRADLGL 608

Query: 537 TPSHIAAT 544
             + IAAT
Sbjct: 609 DGAGIAAT 616


>gi|375108095|ref|ZP_09754356.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderiales bacterium
           JOSHI_001]
 gi|374668826|gb|EHR73611.1| 1-deoxy-D-xylulose-5-phosphate synthase [Burkholderiales bacterium
           JOSHI_001]
          Length = 638

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 266/562 (47%), Positives = 357/562 (63%), Gaps = 30/562 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +R ESEYD FGT HSSTSISA LGMA+   +KG   + VAVIGDGA
Sbjct: 90  MGTLRQLGGISGFPRRDESEYDAFGTAHSSTSISAALGMALAAKIKGEARHAVAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G A+EA+NNAG   +DM+V+LNDN ++S+         PPVGAL+  L+RL S R  
Sbjct: 150 LTGGMAFEALNNAGVSQADMLVVLNDN-EMSIS--------PPVGALNKHLARLLSGRTY 200

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE AK V K    P++E A + +E+ +GM+     T+FEE+G  YIGP+DGH++D L
Sbjct: 201 SGVREGAKSVLKNT--PLYEFAKRFEEHTKGMVVPG--TIFEEMGFTYIGPIDGHDLDAL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  LE +++ +  GP  +HV+T+KG GY  AE     YHG +KFDPA G    ++    +
Sbjct: 257 VPTLENLRDKR--GPHFLHVITKKGYGYKLAEADPINYHGPSKFDPAVGIVKPATPPKTT 314

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D  +V I  AM  G+G+  F RRFP R FDV IAEQHAVTFA GL
Sbjct: 315 FTQVFGQWLCDMAAADPRLVGITPAMREGSGMVEFERRFPGRYFDVSIAEQHAVTFAGGL 374

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 375 ACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGNYDIAFV 434

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM ++ P+DE E    ++TA      P+C RYPRG G+G  L PG   +P   G+ 
Sbjct: 435 RCIPNMAMLTPADENECRQALSTAFG-HGGPACVRYPRGAGVGTALEPGFATLPWGKGEL 493

Query: 421 RILIEG-----ERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           R  + G      R+A+L +GT +   LAA+  L++      VA+ RF KPLD  L+  LA
Sbjct: 494 RREVRGGSASARRIAILAFGTLLYPALAAAEKLDA-----AVANMRFAKPLDTELVLQLA 548

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           +SH+ L+T+E+G I GG GS V + LA  G+    ++   L LPD +I HG PA  +A  
Sbjct: 549 RSHDALVTLEDGCIAGGAGSAVAEALAAAGIQLPLLQ---LGLPDEFIQHGDPAKLMAML 605

Query: 535 GLTPSHIAATVFNILGQTREAL 556
           GL  + I  ++    G  + +L
Sbjct: 606 GLDAAGIEQSITQRFGAPQLSL 627


>gi|15606220|ref|NP_213598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aquifex aeolicus VF5]
 gi|8134411|sp|O67036.1|DXS_AQUAE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|2983421|gb|AAC07004.1| hypothetical protein aq_881 [Aquifex aeolicus VF5]
          Length = 628

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/527 (48%), Positives = 345/527 (65%), Gaps = 24/527 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNN-VVAVIGDGAM 61
           T+RQ  G+SGF +R ES YD FG GHSSTSISA LG  +G+DLKG K + V+AVIGDGA+
Sbjct: 94  TLRQYKGISGFLRREESIYDAFGAGHSSTSISAALGFRIGKDLKGEKEDYVIAVIGDGAL 153

Query: 62  TAGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           TAG AYEA+NNAG++  D  IVILNDN ++S+         P VGA+S+ L+R+ S   +
Sbjct: 154 TAGMAYEALNNAGHIRPDRFIVILNDN-EMSIS--------PNVGAISTYLNRIISGHFV 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +E R+  K   +  G     +    +E+ +G+IS     +FEELG  YIGP+DGH++  L
Sbjct: 205 QETRQKIKNFLQHFGETPLRIMKLTEEFLKGLISPG--VIFEELGFNYIGPIDGHDIKAL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
              L  VK+ K  GPVL+HV T+KG+GY  AE+   K+HGVA +   +G+  K S+   +
Sbjct: 263 EDTLNNVKDIK--GPVLLHVYTKKGKGYKPAEENPVKWHGVAPYKVESGEIIKKSS-PPT 319

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T+ F +AL+  AE D+ +VAI  AM  G+GL  F +RFP R FDVGIAEQHA TFAAGL
Sbjct: 320 WTSVFGKALVELAERDEKIVAITPAMREGSGLVEFAKRFPDRFFDVGIAEQHACTFAAGL 379

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A EGL+P  A YS+F+QRAYDQV+HDV LQ LPV FA+DRAGLVG DGPTH G FD++++
Sbjct: 380 AAEGLRPVAAYYSTFLQRAYDQVIHDVALQNLPVTFAIDRAGLVGDDGPTHHGVFDLSYL 439

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMVV AP DE EL  ++ T      +P   RYPRG   GV   P      +E+G  
Sbjct: 440 RCVPNMVVCAPKDEQELRDLLYT-GIYSGKPFALRYPRGAAYGV---PTEGFKKIEIGTW 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
             L+EGE   +L  G  V   L A+  L   G+R+ V +ARF KP+D  ++R LA  ++ 
Sbjct: 496 EELLEGEDCVILAVGYPVYQALRAAEKLYKEGIRVGVVNARFVKPMDEKMLRDLANRYDT 555

Query: 481 LITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGS 526
            ITVE+ + +GGFGS V++F A++G++   +    L +PDR+I+HG 
Sbjct: 556 FITVEDNTVVGGFGSGVLEFFAREGIMKRVIN---LGVPDRFIEHGK 599


>gi|386817455|ref|ZP_10104673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
 gi|386422031|gb|EIJ35866.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiothrix nivea DSM 5205]
          Length = 630

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/538 (49%), Positives = 354/538 (65%), Gaps = 27/538 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+GF KRSESEYD FG GHSSTSISA LGMA+    KG   + +A+IGDGA
Sbjct: 86  MDSIRQKDGLAGFPKRSESEYDTFGVGHSSTSISAALGMALAAQQKGEDYHSIAIIGDGA 145

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG AYEA+N+AG LD+++IV+LNDN ++S+         P VGAL   L+RL S R  
Sbjct: 146 MTAGMAYEALNHAGDLDANLIVVLNDN-EMSIS--------PNVGALRKYLTRLLSGRMY 196

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K         + +L    +E+ +GM+     TLFEE+G  Y GP+DGH+V++L
Sbjct: 197 SSMRESGKKALSH-SKSLSKLVKLTEEHMKGMVLPG--TLFEEMGFKYYGPIDGHDVEEL 253

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V +LE +K  K  GP L+H++T+KG+GY  AE+    YHGV  F+  TG    S   T +
Sbjct: 254 VHVLENLKQIK--GPRLLHILTQKGKGYEPAEEDPCAYHGVTPFNLKTGLVSSSKKSTPT 311

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L   A  DK +V I  AM  G+GL  F  +FP R FDVGIAEQHAVT AAGL
Sbjct: 312 YTQVFGQWLCDMAAQDKRLVGITPAMREGSGLVAFSEQFPQRYFDVGIAEQHAVTLAAGL 371

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADGPTH G++D++F+
Sbjct: 372 ACEGLKPVVAIYSTFLQRAYDQLLHDVAIQNLPVVFAVDRAGLVGADGPTHSGNYDLSFL 431

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMVVMAP+DE E   M+ TA  + D P+  RYPRG G G+E  P  +   + VGK 
Sbjct: 432 RCVPNMVVMAPADENECRQMLYTAFQL-DCPTAVRYPRGKGTGIE--PHTEMQAMPVGKA 488

Query: 421 -RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
            ++   G  +A+L +G+ +    AA+  L++     T+ + RF KPLD  ++R LA+SHE
Sbjct: 489 VKVRNGGNSIAILLFGSLLAEARAAAEELDA-----TLVNMRFVKPLDKTILRELAQSHE 543

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +L+T+E+ ++ GG GS V ++L + GL    V+   L LPD YI+H    +QLA  GL
Sbjct: 544 LLVTLEDNAVMGGAGSAVNEYLHEAGL---AVEVMNLGLPDVYIEHAQREEQLAACGL 598


>gi|253699519|ref|YP_003020708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sp. M21]
 gi|251774369|gb|ACT16950.1| deoxyxylulose-5-phosphate synthase [Geobacter sp. M21]
          Length = 635

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/553 (47%), Positives = 350/553 (63%), Gaps = 24/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT R   G+SGF KR+ES +D FG GHSSTSISAGLGMAV + LK     +++VIGDG+
Sbjct: 89  FHTQRCYKGISGFPKRAESPHDAFGVGHSSTSISAGLGMAVAQGLKEDAARIISVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN--- 117
           +T G A+EA+N AG+L  ++IV+LNDN ++S+           VGALSS +SR  +    
Sbjct: 149 LTGGMAFEALNQAGHLKKNLIVVLNDN-EMSISKN--------VGALSSFISRKMTGGYY 199

Query: 118 RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           R L++  E        IG  +   A K +   +G ++    TLFE LG  Y+GP+ GH++
Sbjct: 200 RSLKKEMEALMANIPAIGSNILHFAKKAENSLKGFLTPG--TLFEGLGFEYVGPIAGHDL 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ +LE VK  +  GP+L+HV+T+KG+GYP AE   DK+HGVA   PA+    K    
Sbjct: 258 PTLLGVLENVK--RLEGPILLHVMTKKGKGYPPAETMPDKFHGVAPTKPASASPTKRPP- 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT+ F E ++   EVD  ++AI AAM  GTGL  F  RFP R FDVGIAEQHA+TFA
Sbjct: 315 -PSYTSVFGETMVKLGEVDPKILAITAAMPDGTGLTPFAERFPDRFFDVGIAEQHALTFA 373

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA EG +P  AIYS+F QRAYDQV HD+ LQKLPV  A+DRAGLVG DGPTH GSFD+
Sbjct: 374 AGLAVEGFRPVAAIYSTFTQRAYDQVFHDICLQKLPVTLALDRAGLVGDDGPTHHGSFDI 433

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +++  LP + VMAP DE EL HM+ T A    RP   RYPRG G GV L    + +P  +
Sbjct: 434 SYLRHLPELTVMAPKDENELQHMLKT-ALYSGRPISLRYPRGAGFGVPLDQELQELP--I 490

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG +LI+G  + ++  G+ V   L A+A L   G+  +V +ARF KP+D  LI + AK 
Sbjct: 491 GKGELLIDGGDLTIVAIGSTVHPALEAAAQLRQKGIFASVVNARFIKPIDSELILAQAKK 550

Query: 478 HEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              L+TVEE + +GGFGS V++ ++  GL    V+ + + +PDR+I+ G+ A   A  GL
Sbjct: 551 TGCLVTVEENALLGGFGSAVLELISDAGL--NAVRIKRIGIPDRFIEQGTQAQLRADLGL 608

Query: 537 TPSHIAATVFNIL 549
             + IAAT    L
Sbjct: 609 DAAGIAATCETFL 621


>gi|297537808|ref|YP_003673577.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
 gi|297257155|gb|ADI29000.1| deoxyxylulose-5-phosphate synthase [Methylotenera versatilis 301]
          Length = 627

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/556 (45%), Positives = 360/556 (64%), Gaps = 30/556 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++R   G++GF +RSESEYD FGTGHSSTSISA LGMAV     G +   VA+IGDGA
Sbjct: 94  MQSLRNPQGIAGFPRRSESEYDTFGTGHSSTSISAALGMAVAAQKAGLERRAVAIIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG +D++++VILNDN  +S+           VGAL++ L++L S+R  
Sbjct: 154 MTAGMAFEALNNAGDMDANLLVILNDN-DMSISNN--------VGALNNYLAKLLSSRFY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+  K V   +   M E A + +E+ +GM++    TLFEE G  YIGP+DGH++D L
Sbjct: 205 GTVRKSGKKVLSAVPHVM-EFAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDMDAL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  +K  K  GP  +H+VT+KG+G+  AE   +K+HGV KFDP  G    S+ + ++
Sbjct: 262 IDTLSNIKQLK--GPQFLHIVTQKGKGFEPAEDNPNKFHGVGKFDPFNGDALTSNTK-KT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F E L+  A +D  ++ I  AM  G+GLN F  ++P R +DVGIAEQH++TFAAG+
Sbjct: 319 YTQVFGEWLVDMAALDNRLIGITPAMCDGSGLNAFAEKYPDRYYDVGIAEQHSLTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKP  AIYS+F+QRAYDQ++HD+ LQ LPV FA+DRAGLVGADGPTH GSFD++++
Sbjct: 379 ACDGLKPVVAIYSTFLQRAYDQLIHDIALQNLPVLFAIDRAGLVGADGPTHAGSFDLSYL 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+MAPSDE E   M+ T    +   +  RYPRG G GV +    + I  E+G  
Sbjct: 439 RCIPNIVIMAPSDENECRQMLYTGFQYNG-VAAVRYPRGGGAGVVIQKKMQAI--EIGTA 495

Query: 421 RILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            I         ++VA+L +G+ + +CL A   L++     TV + RF KP+D  ++ +LA
Sbjct: 496 EIKRHVASNTKQKVAILSFGSMLNACLKAGEKLDA-----TVVNMRFVKPIDKIMLENLA 550

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFL-AQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
             H ++ITVEE S+ GG GS V++ L A        ++   L LPD++I+HG     LA+
Sbjct: 551 IDHTLIITVEENSVMGGAGSAVLEALQAIQNPNKSPIRTLCLGLPDKFIEHGVHETMLAE 610

Query: 534 AGLTPSHIAATVFNIL 549
            GL    IA+T+  ++
Sbjct: 611 CGLDAEGIASTIAKLI 626


>gi|350546104|ref|ZP_08915528.1| 1-deoxy-D-xylulose 5-phosphate synthase [Candidatus Burkholderia
           kirkii UZHbot1]
 gi|350526130|emb|CCD41296.1| 1-deoxy-D-xylulose 5-phosphate synthase [Candidatus Burkholderia
           kirkii UZHbot1]
          Length = 638

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/554 (48%), Positives = 349/554 (62%), Gaps = 34/554 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 89  MPGLRQLGGISGFPRRSESEYDTFGTAHSSTSISAALGMAIANKLQSDNRYSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EAMNNAG  D   ++VILNDN  +S+         PPVGAL   L+RL S R 
Sbjct: 149 MTAGMAFEAMNNAGVADDLPLLVILNDN-DMSIS--------PPVGALHRHLARLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V +    PM +LA K++E+A+GMI  +  TLFEE G  YIGP+DGH++D 
Sbjct: 200 YAAARAGVERVLRA-APPMLDLARKLEEHAKGMIVPA--TLFEEFGFNYIGPIDGHDLDS 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  G   +HVVT+KG+GY  AE     YHG  KF+PA G +  ++   +
Sbjct: 257 LIPTLQNIKELR--GLQFLHVVTKKGQGYKLAEADPVLYHGPGKFNPAEGIKPSTAPSKK 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   A  D  VV I  AM  G+G+  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 315 TYTQVFGEWLCDAAAQDSRVVGITPAMREGSGMVEFEKRFPDRYFDVGIAEQHAVTFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F
Sbjct: 375 LAADGMKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRAGLVGADGATHAGNYDLAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNM V+A SDE E   M+ TA      P+  RYPRG G GV +      IP  VG+
Sbjct: 435 LRCIPNMTVIAASDENECRQMLYTALQ-QSNPTAVRYPRGAGTGVAMVKQMTAIP--VGR 491

Query: 420 GRILIE-------GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           G I  E       G+R+A+  +GT V   LAA+  L+     LTV + RF KP+D  L+R
Sbjct: 492 GEIRRESSQKLGSGKRIAICAFGTMVAPSLAAAEALD-----LTVVNMRFVKPIDADLLR 546

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA +H+ ++T+EEG+I GG GS  V+ L    ++   ++   L LPD +IDHG PA  L
Sbjct: 547 ELAATHDAIVTIEEGAIMGGAGSACVEALLASSIIKPVLQ---LGLPDTFIDHGDPAKLL 603

Query: 532 AQAGLTPSHIAATV 545
           A  GL    IA ++
Sbjct: 604 ASVGLDAIGIARSI 617


>gi|339010260|ref|ZP_08642830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           LMG 15441]
 gi|338772415|gb|EGP31948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           LMG 15441]
          Length = 628

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/553 (46%), Positives = 361/553 (65%), Gaps = 26/553 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL GF K +ES +D + TGHSSTS+S  +GMA  RDLK    +V+ VIGDGA+T
Sbjct: 89  TLRQYKGLCGFPKMAESAHDVWETGHSSTSLSGAMGMASARDLKKENYHVIGVIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS----NR 118
            G A+EA+N+ G+   ++IV+LNDN ++S+         P VGA+ + L +L++    NR
Sbjct: 149 GGMAFEALNHIGHEKKNVIVVLNDN-EMSIA--------PNVGAMHNYLGKLRTDHIYNR 199

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGM-ISGSGSTLFEELGLYYIGPVDGHNV 177
              E+  + K +   +GG + +LA KV +  + M +SG    LFEELG  YIGP+DGHN+
Sbjct: 200 AKDEVESLLKAIPA-VGGKLAQLAEKVKDSMKYMLVSG---ILFEELGFTYIGPIDGHNL 255

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           + ++  L    NT+  GPVL+HV+T+KG+GY  AE+ A K+HG   +   +G+  K+ A 
Sbjct: 256 ELVIDSLRTAANTR--GPVLLHVITKKGKGYLPAEQNAMKWHGTDTYKIESGEMIKAVAA 313

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             +Y + FA+ LI   + D  +VAI  AM  G+GL  +   +P R FDVGIAEQHA TFA
Sbjct: 314 APAYKSVFADTLIKLTQQDDRIVAITPAMPDGSGLLKYASVYPERMFDVGIAEQHACTFA 373

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA +G+KPF AIYS+F+QRAYDQ++HDV   KLPV FA+DRAGLVGADG TH G +D+
Sbjct: 374 AGLATQGMKPFLAIYSTFLQRAYDQLIHDVARMKLPVVFAVDRAGLVGADGETHQGVYDI 433

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            FM  +PNMV+MAP DE E+ HM+ TAA  D  P  FRYPRGNG+GV++    K +P  +
Sbjct: 434 AFMRAIPNMVIMAPKDENEMQHMMKTAAEYDG-PISFRYPRGNGLGVKMDEELKALP--I 490

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           G+  ++ EG+ VA+L +G        A  LL+ +G+     +ARFCKPLD  L+  LAK 
Sbjct: 491 GQMEVVREGKGVAVLSFGHIYDVAEKAINLLQMDGIMPMFVNARFCKPLDEELLLRLAKE 550

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +  ++TVEEG + GGFGS V++F A+ G  +  V+  P+ +PD +++HGS  +Q  +  L
Sbjct: 551 NMDIVTVEEGCVQGGFGSAVMEFYAEQGYHNMVVE--PMGIPDYFVEHGSVKEQRQEISL 608

Query: 537 TPSHIAATVFNIL 549
           T   IAA V ++L
Sbjct: 609 TAEAIAARVRSLL 621


>gi|344342928|ref|ZP_08773798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marichromatium purpuratum
           984]
 gi|343805480|gb|EGV23376.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marichromatium purpuratum
           984]
          Length = 643

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/552 (48%), Positives = 358/552 (64%), Gaps = 30/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MH++RQ  GLSGF KR ES YD FG GHSSTSISA LGMA+    +G + NV+AVIGDGA
Sbjct: 103 MHSLRQKGGLSGFPKRGESAYDTFGVGHSSTSISAALGMAIAAKQRGERRNVIAVIGDGA 162

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           + AG A+EA+N+AG +D D+ VILNDN ++S+         PPVGA+S+ L+RL S +  
Sbjct: 163 LGAGMAFEALNHAGSMDIDLTVILNDN-EMSIS--------PPVGAISNHLARLLSGKLY 213

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             +RE +K   +  G P + EL  + +E+ +GM+  S  TLFEELG  YIGP+DGH   D
Sbjct: 214 TSMREGSKSALR--GMPQLRELVGRWEEHMKGMVMPS--TLFEELGFNYIGPIDGH---D 266

Query: 180 LVAILEEVKNTK-TTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           L ++L+ ++N K   G  L+HVVT KG GY  AE     +HGV  FD  TG+  KS A+ 
Sbjct: 267 LESVLKTLRNVKGMPGQRLLHVVTHKGHGYEPAEGQPVTFHGVTPFDRQTGEFRKSKAKG 326

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F   L   A  D  +VAI  AM  G+G+  F +RFP R  DVGIAEQHAVT AA
Sbjct: 327 PTYTKVFGSWLCDTAARDPRLVAITPAMCEGSGMGEFAKRFPQRFHDVGIAEQHAVTLAA 386

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+ACEG+KP  AIYSSF+QRA+DQ+VHDV LQ+L V  A+DR GLVGADG TH G FD++
Sbjct: 387 GMACEGVKPVVAIYSSFLQRAFDQLVHDVCLQQLDVTLAVDRGGLVGADGATHAGCFDLS 446

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F   LP++V+MAP+DE E   M+ T    +  P+  RYPRG G GV + P    +P  +G
Sbjct: 447 FSRPLPDLVIMAPADENECRQMLKTGYEFNG-PAMVRYPRGVGPGVAVDPAAPALP--IG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           +G  + EG+RVA+L +GT V   L  +  L++     TVA+ RF KPLD  LI +LA+ H
Sbjct: 504 RGLRVREGQRVAMLAFGTMVAPALEVAEELDA-----TVANMRFVKPLDRELILALAREH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
            +L+T+EE ++ GG GS + + L  +G++   ++   L LPDR +DH + A+QLA+ GL 
Sbjct: 559 ALLVTLEENTLAGGAGSAITELLNAEGVVVPVLQ---LGLPDRNVDHATQAEQLAECGLD 615

Query: 538 PSHIAATVFNIL 549
            + I  +V   L
Sbjct: 616 VAGIRDSVSRAL 627


>gi|421874464|ref|ZP_16306068.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           GI-9]
 gi|372456508|emb|CCF15617.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus laterosporus
           GI-9]
          Length = 614

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/553 (46%), Positives = 361/553 (65%), Gaps = 26/553 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL GF K +ES +D + TGHSSTS+S  +GMA  RDLK    +V+ VIGDGA+T
Sbjct: 75  TLRQYKGLCGFPKMAESAHDVWETGHSSTSLSGAMGMASARDLKKENYHVIGVIGDGALT 134

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS----NR 118
            G A+EA+N+ G+   ++IV+LNDN ++S+         P VGA+ + L +L++    NR
Sbjct: 135 GGMAFEALNHIGHEKKNVIVVLNDN-EMSIA--------PNVGAMHNYLGKLRTDHIYNR 185

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGM-ISGSGSTLFEELGLYYIGPVDGHNV 177
              E+  + K +   +GG + +LA KV +  + M +SG    LFEELG  YIGP+DGHN+
Sbjct: 186 AKDEVESLLKAIPA-VGGKLAQLAEKVKDSMKYMLVSG---ILFEELGFTYIGPIDGHNL 241

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           + ++  L    NT+  GPVL+HV+T+KG+GY  AE+ A K+HG   +   +G+  K+ A 
Sbjct: 242 ELVIDSLRTAANTR--GPVLLHVITKKGKGYLPAEQNAMKWHGTDTYKIESGEMIKAVAA 299

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             +Y + FA+ LI   + D  +VAI  AM  G+GL  +   +P R FDVGIAEQHA TFA
Sbjct: 300 APAYKSVFADTLIKLTQQDDRIVAITPAMPDGSGLLKYASVYPERMFDVGIAEQHACTFA 359

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA +G+KPF AIYS+F+QRAYDQ++HDV   KLPV FA+DRAGLVGADG TH G +D+
Sbjct: 360 AGLATQGIKPFLAIYSTFLQRAYDQLIHDVARMKLPVVFAVDRAGLVGADGETHQGVYDI 419

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            FM  +PNMV+MAP DE E+ HM+ TAA  D  P  FRYPRGNG+GV++    K +P  +
Sbjct: 420 AFMRAIPNMVIMAPKDENEMQHMMKTAAEYDG-PISFRYPRGNGLGVKMDEELKALP--I 476

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           G+  ++ EG+ VA+L +G        A  LL+ +G+     +ARFCKPLD  L+  LAK 
Sbjct: 477 GQMEVVREGKGVAVLSFGHIYDVAEKAINLLQMDGIMPMFVNARFCKPLDEELLLRLAKE 536

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +  ++TVEEG + GGFGS V++F A+ G  +  V+  P+ +PD +++HGS  +Q  +  L
Sbjct: 537 NMDIVTVEEGCVQGGFGSAVMEFYAEQGYHNMVVE--PMGIPDYFVEHGSVKEQRQEISL 594

Query: 537 TPSHIAATVFNIL 549
           T   IAA V ++L
Sbjct: 595 TAEAIAARVRSLL 607


>gi|428224504|ref|YP_007108601.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geitlerinema sp. PCC 7407]
 gi|427984405|gb|AFY65549.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geitlerinema sp. PCC 7407]
          Length = 637

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/554 (46%), Positives = 358/554 (64%), Gaps = 27/554 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RDLKG K  VVAVIGDGA+
Sbjct: 88  HTLRQKDGIAGYLKRGESKFDHFGAGHASTSISAALGMAIARDLKGEKFKVVAVIGDGAL 147

Query: 62  TAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPP-VGALSSALSRLQSNRP 119
           T G A EA+N+AG+L  ++++V+LNDN          D  I P VGALS  L++++ + P
Sbjct: 148 TGGMALEAINHAGHLPRTNLMVVLNDN----------DMSISPNVGALSRYLNKMRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K +      L+ +++    GM    +S  G+ +FEELG  YIGPVDGH
Sbjct: 198 MQFLSDNLEEQFKHLPFVGDSLSPELNRVKEGMKRLAVSKVGA-VFEELGFTYIGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+   ++  +    GPVL+HV T KG+GY  AE+    YH  + F+ ATGK   +S
Sbjct: 257 NLEELITTFQQAHSQ--VGPVLVHVSTTKGKGYAIAEQDQVGYHAQSPFNLATGKAIPAS 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  SY+  FA  L+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAV
Sbjct: 315 KPKPPSYSKVFAHTLVKLAEDNPKIVGITAAMATGTGLDKLQAKLPKQYMDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T A GLACEG++P  AIYS+F+QRA+DQVVHDV +Q LPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAGGLACEGMRPVVAIYSTFLQRAFDQVVHDVCIQNLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGI 413
           +D++++ C+PNMV+MAP DEAEL  M+ T     D P   RYPRGNG GV L   G + +
Sbjct: 435 YDISYLRCIPNMVLMAPKDEAELQQMLVTGVNYTDGPIALRYPRGNGYGVPLMEEGWEAL 494

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P  +GK  +L +G+ + LLGYG+ V   +  + +L  +G+  TV +ARF KP+D  LI  
Sbjct: 495 P--IGKAEVLRQGDDLLLLGYGSMVYPAMQTAEILSEHGVEATVVNARFAKPIDDELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    ++T+EEGSI GGFGS V + L   G++   ++   L +PD  ++H  P +   
Sbjct: 553 LAQKIGRVVTMEEGSIMGGFGSGVAEALLDAGVVVPVMR---LGVPDTLVEHAKPEESKV 609

Query: 533 QAGLTPSHIAATVF 546
           + GLTPS +A  + 
Sbjct: 610 ELGLTPSQMAERIL 623


>gi|218245352|ref|YP_002370723.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 8801]
 gi|226740147|sp|B7JVJ6.1|DXS_CYAP8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|218165830|gb|ACK64567.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 8801]
          Length = 636

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/562 (45%), Positives = 354/562 (62%), Gaps = 25/562 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RD +G    VVAVIGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAALGMALARDAQGEDYKVVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN ++S+         P VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPHTNLMVVLNDN-EMSIS--------PNVGAISRYLNKVRLSDP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K +      L+ +++    GM    +S  G+ + EELG  Y GP+DGH
Sbjct: 198 VQFLADNLEEQFKHLPFFGDSLSPEMERVKEGMKRLAVSKVGAVI-EELGFKYFGPIDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+ +L++  ++    K TGPVL+HV T KG+GY  AEK    YH  + F+ ATGK   SS
Sbjct: 257 NLQELISTFKQAH--KVTGPVLVHVATVKGKGYELAEKDQVGYHAQSPFNLATGKAIPSS 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  SY   FA  L   AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAV
Sbjct: 315 KPKPPSYAKVFAHTLTTLAENNPKIIGITAAMATGTGLDKLQAKLPKQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T A GLACEG++P  AIYS+F+QRAYDQV+HDV +Q LPV F MDRAG+VGADGPTH G 
Sbjct: 375 TLAGGLACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNLPVFFCMDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ C+PNM +MAP DEAEL  M+ T     D P   RYPRGNGIGV  P   +G  
Sbjct: 435 YDIAYLRCIPNMTIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGIGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PL +GKG IL  G+ + +LGYGT V + L A+  L  +G+  TV +ARF KPLD  LI  
Sbjct: 493 PLPIGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGIEATVVNARFVKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    ++T+EEG + GGFGS V +  +   +L   V  +   +PDR +DH +P    A
Sbjct: 553 LAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPLKRFGVPDRLVDHATPDQSKA 609

Query: 533 QAGLTPSHIAATVFNILGQTRE 554
             GLT   IA  +  +    R+
Sbjct: 610 DLGLTSPQIAEQILQVFFSNRQ 631


>gi|311105030|ref|YP_003977883.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           A8]
 gi|310759719|gb|ADP15168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           A8]
          Length = 620

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/547 (48%), Positives = 352/547 (64%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +A+IGDGA
Sbjct: 90  MAKLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAIIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 150 MSAGMAFEAMNNAGVTPNINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA + +E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAVLQHVP-PVLELARRFEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  +  G   +HVVT+KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLKALE--GLQFLHVVTKKGQGYKLAEADPVLYHGPGKFDPAVGIQQSKAPGKR 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           S+T  F + L   AE D  +VAI  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 SFTQVFGQWLCDMAEQDSRLVAITPAMREGSGLVEFEQRFPLRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+FMQR YDQ +HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 376 IACEGQKPVVAIYSTFMQRGYDQFIHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV  PSDE E   +++T       P+  RYPRG G G    PG   +  E+G+
Sbjct: 436 LRCVPNMVVATPSDENETRLLLSTCYQ-HPGPASVRYPRGAGCGAAEAPGLDTV--ELGR 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  EG ++A+LG+G  +Q+ L A+  L++     TVAD RF KP+D  LI  LA  H+
Sbjct: 493 GVVRREGRKIAILGFGMLLQAALGAAEKLDA-----TVADMRFVKPIDRELILDLASRHD 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+T+E+ SI GG GS V++ L+  G+   T+    L LPD +IDHG  +   A  GL  
Sbjct: 548 ALVTLEDASIMGGAGSAVLETLSAAGI---TIPVLQLGLPDEFIDHGEQSALWAGIGLDA 604

Query: 539 SHIAATV 545
           + I +++
Sbjct: 605 TGIESSI 611


>gi|197119726|ref|YP_002140153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
           Bem]
 gi|197089086|gb|ACH40357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter bemidjiensis
           Bem]
          Length = 635

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/553 (47%), Positives = 349/553 (63%), Gaps = 24/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT R   G+SGF KR+ES +D FG GHSSTSISAGLGMAV + LK     V++VIGDG+
Sbjct: 89  FHTQRCYKGISGFPKRAESPHDAFGVGHSSTSISAGLGMAVAQGLKEDAARVISVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN--- 117
           +T G A+EA+N AG+L  ++IV+LNDN ++S+           VGALSS +SR  +    
Sbjct: 149 LTGGMAFEALNQAGHLKKNLIVVLNDN-EMSISKN--------VGALSSFISRKMTGGYY 199

Query: 118 RPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           R L++  E        IGG +   A K +   +G ++    TLFE LG  Y+GP+ GH++
Sbjct: 200 RSLKKEMEALMANIPAIGGNILHFAKKAENSLKGFLTPG--TLFEGLGFEYVGPIAGHDL 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ +LE VK  +  GP+L+HV+T+KG+GYP AE   DK+HGVA   PA+    K    
Sbjct: 258 PTLLGVLENVK--RLEGPILLHVMTKKGKGYPPAETMPDKFHGVAPTKPASASPAKLPP- 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT+ F   ++   E+D  ++AI AAM  GTGL  F  RFP R FDVGIAEQHA+TFA
Sbjct: 315 -PSYTSVFGNTMVKLGEIDPKILAITAAMPDGTGLTPFAERFPDRFFDVGIAEQHALTFA 373

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA EG +P  AIYS+F QRAYDQ+ HDV LQKLPV  A+DRAGLVG DGPTH GSFD+
Sbjct: 374 AGLAVEGFRPVAAIYSTFTQRAYDQIFHDVCLQKLPVTLALDRAGLVGDDGPTHHGSFDI 433

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +++  LP + VMAP DE EL HM+ T A    RP   RYPRG G GV L    + +P  +
Sbjct: 434 SYLRHLPELTVMAPKDENELQHMLKT-ALYSGRPISLRYPRGAGFGVPLDHELQELP--I 490

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG +LI+G  + ++  G+ V   L A+A L   G+   V +ARF KP+D  LI + AK 
Sbjct: 491 GKGELLIDGGDLTIVAIGSTVHPALEAAAQLRQKGIFAAVVNARFIKPIDSELILAQAKK 550

Query: 478 HEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              L+TVEE + +GGFGS V++ L+  GL    V+ + + +PDR+I+ G+ A   A  GL
Sbjct: 551 TGCLVTVEENALLGGFGSAVLELLSDAGL--NAVRIKRIGIPDRFIEQGTQAQLRADLGL 608

Query: 537 TPSHIAATVFNIL 549
             + IAAT    L
Sbjct: 609 DAAGIAATCETFL 621


>gi|428219388|ref|YP_007103853.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudanabaena sp. PCC
           7367]
 gi|427991170|gb|AFY71425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudanabaena sp. PCC
           7367]
          Length = 639

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 257/556 (46%), Positives = 350/556 (62%), Gaps = 24/556 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KR+ES +D FG GH+STSISAGLGMA+ RD  G    V A+IGDGA+
Sbjct: 88  HTLRQKDGVAGYLKRTESPFDHFGAGHASTSISAGLGMAMARDAMGDDYKVAAIIGDGAL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L  ++++VILNDN ++S+         P VGA+   L+RL+ + P+
Sbjct: 148 TGGMALEAINHAGHLPKTNLLVILNDN-EMSIS--------PNVGAIPRYLNRLRLSEPI 198

Query: 121 RELREVAKGVTKQI---GGPMHELAAKVDEYAR--GMISGSGSTLFEELGLYYIGPVDGH 175
           + + E  +   + +   GG +     ++ +  +   M+      + EELG  YIGP+DGH
Sbjct: 199 QSISENLEDQIRNLPFLGGSISPEIERLRDNFKIVTMLQNKVGAIIEELGFKYIGPIDGH 258

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           NV +L+         K  GPV++HV T KG+GY YAE     YH    FD ATGK   S 
Sbjct: 259 NVKELIDTFTMAHTLK--GPVMVHVSTTKGKGYKYAEVDKVAYHAQNAFDIATGKATPSK 316

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +   Y+  F + LI  AE DK ++ I AAM  GTGL+    +FP +  DVGIAEQHA+T
Sbjct: 317 PKPPKYSKVFVDTLIKLAEHDKRIIGITAAMATGTGLDKLQTKFPDQYVDVGIAEQHAIT 376

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+ACEG++P  AIYS+F+QRAYDQ++HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 377 LAAGMACEGVRPIAAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMY 436

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D+ ++ C+PNMV+MAP DEAEL  M+ T     D P   RYPRGNGIGV  P   +G  P
Sbjct: 437 DIAYLRCIPNMVMMAPKDEAELQQMLVTGINYTDGPIAMRYPRGNGIGV--PLQEEGWQP 494

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           L +GKG +L EG+ V L+ YGT V + + A+ LL  +G+  TV +ARF KP+D  LI  L
Sbjct: 495 LPIGKGEVLREGDDVLLVAYGTMVNTAMQAAELLVEHGMEATVVNARFAKPIDLELIAPL 554

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    + T+EEG I GGFGS V++ L   G++    +   L +PD  +DH SP +  A 
Sbjct: 555 AQKIGHVFTLEEGCIMGGFGSGVLEGLMDMGIMLPITR---LGVPDILVDHASPDEAKAG 611

Query: 534 AGLTPSHIAATVFNIL 549
            GLT   I   +   L
Sbjct: 612 LGLTSGQIKDRILTQL 627


>gi|198283750|ref|YP_002220071.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665347|ref|YP_002426381.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248271|gb|ACH83864.1| deoxyxylulose-5-phosphate synthase [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517560|gb|ACK78146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 624

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/540 (49%), Positives = 353/540 (65%), Gaps = 27/540 (5%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +R  DGLSGF KR ES YD FG GHSSTSISAGLGMAV   L+ +   VVA+IGDGAMTA
Sbjct: 92  LRIRDGLSGFLKRDESPYDSFGAGHSSTSISAGLGMAVAARLEHKSRQVVAIIGDGAMTA 151

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 123
           G AYEA+NN G LD+D++V+LNDN ++S+         P VGA+S  L+R+ S R    +
Sbjct: 152 GLAYEALNNGGVLDADLLVVLNDN-EMSIS--------PNVGAVSRYLTRILSGRLYNTV 202

Query: 124 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 183
           RE A G       P+ ELA K +E  +G+++     LFEE+G +Y GP+DGH++D L+  
Sbjct: 203 REGA-GQALSFVPPLRELARKAEEGVKGLVTPG--ALFEEMGFHYFGPIDGHDLDALIPT 259

Query: 184 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 243
           LE +K  K  GP L+HV+T+KG+GY  AE     YHGV  F+ + G+  K SA   SYT 
Sbjct: 260 LENLK--KIRGPRLLHVITKKGKGYGPAELDPCGYHGVTPFNRSDGRMAKKSAGAPSYTQ 317

Query: 244 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 303
            F + L  +   +K +VAI  AM  G+GL  F + FP R FDVGIAEQHAVTFAAGLAC+
Sbjct: 318 VFGDWLCEKGAAEKHLVAITPAMREGSGLVRFEQLFPERYFDVGIAEQHAVTFAAGLACD 377

Query: 304 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 363
           G+ P  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADG TH G+FD+ +  C+
Sbjct: 378 GIHPVVAIYSTFLQRAYDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDIAYARCI 437

Query: 364 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG-NKGIPLEVGKGRI 422
           PN+V+MAP DE E+  M+ T  A    P+  RYPR NG+GV L    ++ IP  VGK  I
Sbjct: 438 PNLVIMAPKDEQEMRDMLNTGFAWQG-PALVRYPRDNGLGVALDRDLSRQIP--VGKAEI 494

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
           L +G+ +A+L +GT   + +AA   L++     TV + RF KPLD  L+ SLA++H   +
Sbjct: 495 LRKGKDLAILAFGTRAAAAMAAGETLDA-----TVVNMRFVKPLDTELLTSLAQTHRAFL 549

Query: 483 TVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEEG+ +GG GS V +FL  +G++   V  R L LPD +I+ G     LA  GL  + I
Sbjct: 550 TVEEGARMGGAGSAVAEFLLNEGVV---VPMRLLGLPDIFIEQGDAGRWLADLGLDAAGI 606


>gi|421618907|ref|ZP_16059874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri KOS6]
 gi|409779087|gb|EKN58761.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri KOS6]
          Length = 632

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 349/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +RSESEYD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MATLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPPAPKKPAGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADARLTGITPAMKEGSDLVAFSERYPDRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGLKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + PG +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNAAIEPGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G + ALL +G  +   L     L++     TV D RF KPLD AL+R LA SH +
Sbjct: 505 VVRRQGSKTALLVFGVQLPEALRVGEALDA-----TVVDMRFVKPLDEALLRELAASHAL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE SI GG GS V +FLA +G+L      RP++   LPD Y++H  P++ LA+ GL
Sbjct: 560 LVTIEENSIMGGAGSAVAEFLAAEGVL------RPILHLGLPDYYVEHAKPSEMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A V
Sbjct: 614 DAAGIEAAV 622


>gi|398807912|ref|ZP_10566782.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax sp. CF313]
 gi|398088543|gb|EJL79101.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax sp. CF313]
          Length = 618

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/546 (47%), Positives = 352/546 (64%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +R+ESEYD FGT HSSTSISA LGMA+    KG   + VA+IGDGA
Sbjct: 89  MPTLRQIGGISGFPQRTESEYDTFGTAHSSTSISAALGMAMAAKQKGEDRHAVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+NNAG  D  ++VILNDN  +S+         PPVGAL+  L++L S    
Sbjct: 149 LTAGMAFEALNNAGVCDCKLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGNFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V +    P+ ELA +++++A+GM+  +  TLFE+ G  Y+GP+DGH++D L
Sbjct: 200 AAAKSVGKSVLRN-APPLFELAKRLEQHAKGMVVPA--TLFEQFGFNYVGPIDGHDLDSL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  LE +K+ +  GP  +HVVT+KG+GY  AE     YHG  KFDP  G    ++   Q+
Sbjct: 257 VPTLENLKHLE--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPQVGLVKSAAVVKQT 314

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D  +V I  AM  G+GL  F +RFP R +DVGIAEQHAVTFAAGL
Sbjct: 315 FTQVFGQWLCDTAAADGRLVGITPAMREGSGLVEFEKRFPDRYYDVGIAEQHAVTFAAGL 374

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 375 ACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFALDRAGLVGADGATHAGAYDIPFL 434

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++ T+A   + P   RYPRG G G       + +P   GKG
Sbjct: 435 RCIPNMSIACPADERECRQLL-TSAYEQNHPVAVRYPRGAGAGAAPHLTLEALPF--GKG 491

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  EG R+A+L +GT +   LAA+  L++     TV + R+ KPLD  L+  +A +H+ 
Sbjct: 492 EIRREGRRIAILAFGTLLYPALAAAEPLDA-----TVVNMRWAKPLDVELLLKVAGTHDA 546

Query: 481 LITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EEG ++GG GS V++ L    +    ++   L LPDR+I+HG PA  LA  GL   
Sbjct: 547 IVTLEEGATMGGAGSAVLEALQAANIQKPVLQ---LGLPDRFIEHGDPAKLLASIGLDAP 603

Query: 540 HIAATV 545
            I A++
Sbjct: 604 GIEASI 609


>gi|428211174|ref|YP_007084318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria acuminata PCC
           6304]
 gi|427999555|gb|AFY80398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria acuminata PCC
           6304]
          Length = 635

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/554 (45%), Positives = 350/554 (63%), Gaps = 23/554 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ +G++G+ KRSES++D FG GH+STSISAGLGMA+ RD+KG K  VV+VIGDGA
Sbjct: 88  FHTLRQKNGVAGYLKRSESKFDHFGAGHASTSISAGLGMALARDMKGEKFKVVSVIGDGA 147

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L +++++V+LNDN+    P          VGA+   L++++ + P
Sbjct: 148 LTGGMALEAINHAGHLPNTNLMVVLNDNEMSISPN---------VGAIPRYLNKMRLSPP 198

Query: 120 LRELREVAKGVTKQ---IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L++  +   K    +G        ++ E  + +       +FEELG  YIGP+DGHN
Sbjct: 199 VQFLKDNLEEQFKHLPFVGETFTPEMQRIKEGMKRLAVPKVGAVFEELGFTYIGPIDGHN 258

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L+    +    +  GPVL+HV T KG+GY  AEK    YH    F+ ATGK   S+ 
Sbjct: 259 LEELITTFNQAH--QMPGPVLVHVATVKGKGYAIAEKDQVGYHAQNPFNLATGKAIPSNK 316

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  FAE LI  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHA T
Sbjct: 317 PKPPSYSKVFAETLIKLAEENPKIVGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAAT 376

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLACEG++P CAIYS+F+QRAYDQ++HD+ +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 377 LAAGLACEGIRPVCAIYSTFLQRAYDQIIHDICIQKLPVFFCLDRAGIVGADGPTHQGLY 436

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D+  + C+PN+V+MAP DEAEL  M+ T     D     RYPRGNG GV  P   +G  P
Sbjct: 437 DIASLRCIPNLVLMAPKDEAELQRMLVTGIDYTDGAIAMRYPRGNGYGV--PLMEEGWEP 494

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+GKG IL  G+ + +LGYG+ V   L  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 495 LEIGKGEILRSGDDLLILGYGSMVYPALQTAEILNEHGISATVVNARFVKPLDTELILPL 554

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFGS V +      +    V    L +PD+ +DH  P    A+
Sbjct: 555 AQRIGKVVTMEEGCLMGGFGSAVAEACMDQNI---PVSMLRLGVPDQLVDHAKPEQSFAE 611

Query: 534 AGLTPSHIAATVFN 547
            GLTPS +A  V  
Sbjct: 612 LGLTPSQMADRVLQ 625


>gi|257058388|ref|YP_003136276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 8802]
 gi|256588554|gb|ACU99440.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 8802]
          Length = 636

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/562 (45%), Positives = 354/562 (62%), Gaps = 25/562 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RD +G    VVAVIGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAALGMALARDAQGEDYKVVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN ++S+         P VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPHTNLMVVLNDN-EMSIS--------PNVGAISRYLNKVRLSDP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K +      L+ +++    GM    +S  G+ + EELG  Y GP+DGH
Sbjct: 198 VQFLADNLEEQFKHLPFFGDSLSPEMERVKEGMKRLAVSKVGAVI-EELGFKYFGPIDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+ +L++  ++    K TGPVL+HV T KG+GY  AEK    YH  + F+ ATGK   SS
Sbjct: 257 NLQELISTFKQAH--KVTGPVLVHVATVKGKGYELAEKDQVGYHAQSPFNLATGKAIPSS 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  SY   FA  L   AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAV
Sbjct: 315 KPKPPSYAKVFAHTLTTLAENNPKIIGITAAMATGTGLDKLQAKLPKQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T A GLACEG++P  AIYS+F+QRAYDQV+HDV +Q LPV F MDRAG+VGADGPTH G 
Sbjct: 375 TLAGGLACEGMRPVVAIYSTFLQRAYDQVLHDVCIQNLPVFFCMDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ C+PNM +MAP DEAEL  M+ T     D P   RYPRGNGIGV  P   +G  
Sbjct: 435 YDIAYLRCIPNMTIMAPKDEAELQRMIVTGVNYTDGPIAMRYPRGNGIGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PL +GKG IL  G+ + +LGYGT V + L A+  L  +G+  TV +ARF KPLD  LI  
Sbjct: 493 PLPIGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGIEATVLNARFVKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    ++T+EEG + GGFGS V +  +   +L   V  +   +PDR +DH +P    A
Sbjct: 553 LAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPLKRFGVPDRLVDHATPDQSKA 609

Query: 533 QAGLTPSHIAATVFNILGQTRE 554
             GLT   IA  +  +    R+
Sbjct: 610 DLGLTSPQIAEQILQVFFSNRQ 631


>gi|440680572|ref|YP_007155367.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
           7122]
 gi|428677691|gb|AFZ56457.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena cylindrica PCC
           7122]
          Length = 636

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 256/554 (46%), Positives = 355/554 (64%), Gaps = 25/554 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR E+++D FG GH+STSISA LGMA+ RDLKG K   VAVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAALGMALARDLKGEKFKAVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN+    P          VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKMRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ +++  +   K I      L+ ++D    GM    +   G+ +FEELG  Y+GPVDGH
Sbjct: 198 VQFIKDNFEEQVKHIPFVGESLSPELDRIKEGMKRLAVPKVGA-VFEELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+A  ++    + TGPVL+HVVT KG+GY  AEK    YH    F+ +TGK   S+
Sbjct: 257 NLEELIATFQQAH--QMTGPVLVHVVTTKGKGYEIAEKDQVGYHAQNPFNVSTGKAIPSN 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  +Y   F+  L+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHA+
Sbjct: 315 KPKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTGLDKLQTKLPNQYIDVGIAEQHAI 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ C+PNMVVMAP DEAEL  MV T       P   R+PRGNG GV  P   +G  
Sbjct: 435 YDIAYLRCIPNMVVMAPKDEAELQRMVVTGINHTSGPISMRFPRGNGHGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PLE+GKG IL +G+ V ++GYGT V   + A+ +L  +G+  TV +ARF KPLD  LI  
Sbjct: 493 PLEIGKGEILRQGDDVLIVGYGTMVYPGMQAAEILSEHGIEATVINARFVKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LAK    ++T+EEG + GGFGS V + L    +L   V  + + +PD  +DH +P    A
Sbjct: 553 LAKQIGRVVTLEEGCLMGGFGSAVAEALMDADVL---VPVKRIGVPDILVDHATPDQSFA 609

Query: 533 QAGLTPSHIAATVF 546
             GL+   IA TV 
Sbjct: 610 ALGLSSRQIAETVL 623


>gi|169831189|ref|YP_001717171.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|229813271|sp|B1I3J6.1|DXS_DESAP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169638033|gb|ACA59539.1| deoxyxylulose-5-phosphate synthase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 634

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/549 (47%), Positives = 350/549 (63%), Gaps = 26/549 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ +GLSGF  R+ESEYDCFGTGHSSTSISA LGMA+ RDL G   NVVAVIGDGA
Sbjct: 88  FHTLRQFEGLSGFPNRNESEYDCFGTGHSSTSISAALGMALARDLSGEDRNVVAVIGDGA 147

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           ++ G A+EA+N AG+L   +IV+LNDN ++S+           VGA++  LSRL+++   
Sbjct: 148 LSGGMAFEALNQAGHLGCRLIVVLNDN-EMSIARN--------VGAMARYLSRLRTDPMY 198

Query: 121 RELREVAKGVTKQIG--GP--MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
              ++  + + ++I   GP  +  +    D     +++G    LFEELG  Y+GP+DGHN
Sbjct: 199 SRSKDEVESLLRRIPAIGPRVLGWIERIKDSLKYLVVAG---MLFEELGFTYLGPIDGHN 255

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  ++ +  + +  +  GPVL+HV+T+KG+GY  AEK  DK+HGV  FDPATG    + A
Sbjct: 256 IPAMLNVFRQAQAVE--GPVLVHVLTKKGKGYAPAEKNPDKFHGVGPFDPATGNT-PTDA 312

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           R  S+T  F   L+  AE D  ++AI AAM  GTGL  F RRFP R FDVGIAEQHAVT 
Sbjct: 313 RV-SFTEVFGRTLVQLAEADSRILAITAAMTSGTGLGPFSRRFPQRFFDVGIAEQHAVTL 371

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLA EG +P  AIYS+F+QRAYDQV+HDV LQKLPV FA+DR G+VG DG TH G FD
Sbjct: 372 AAGLAVEGYRPVVAIYSTFLQRAYDQVLHDVCLQKLPVVFALDRGGIVGEDGVTHQGVFD 431

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
            +F+  +PN+V+MAP DE E  HM+ TA    + P   RYPRG G G  L      +P  
Sbjct: 432 FSFLRPVPNLVMMAPKDENEFQHMLKTAVE-HEGPIAVRYPRGTGTGCALDQDLVALP-- 488

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G+  +L EG+ + L+  G  V + + A+ +L   G+  +V +ARF KPLD   I   A+
Sbjct: 489 IGRAEVLREGDDITLIAIGNMVPTAVKAAEILAERGIEASVVNARFVKPLDEKCICHYAR 548

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
               LIT+EE  I GGFGS V + L   GL D  V+ + + LPD +I+HG+P    A+ G
Sbjct: 549 RTGRLITLEENVIAGGFGSAVQELLVAKGLTD--VRVQLIGLPDVFIEHGAPHLLRAKYG 606

Query: 536 LTPSHIAAT 544
           LT   +  T
Sbjct: 607 LTVDRVVRT 615


>gi|359798546|ref|ZP_09301117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter
           arsenitoxydans SY8]
 gi|359363368|gb|EHK65094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter
           arsenitoxydans SY8]
          Length = 620

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/548 (48%), Positives = 355/548 (64%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +AVIGDGA
Sbjct: 90  MAKLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 150 MSAGMAFEAMNNAGVTPNINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA + +E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAVLQHVP-PVLELARRFEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  +  G   +HVVT KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLKALE--GLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQQSKAPGKR 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F + L   A+ DK +VA+  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFGKWLCDTAQQDKRLVAVTPAMREGSGLVEFEQRFPQRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+FMQR YDQ +HDV LQ L V FA+DRAG+VGADG TH G++D+ F
Sbjct: 376 VACEGQKPVVAIYSTFMQRGYDQFIHDVALQNLDVTFALDRAGIVGADGATHAGNYDIAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP-LEVG 418
           + C+PNMVV  PSDE E   +++T       P+  RYPRG G G    P + G+  +E+G
Sbjct: 436 LRCVPNMVVATPSDENETRLLLSTCYQYPG-PASVRYPRGAGCGA---PESDGLDVVELG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG I  EG+++A+LG+GT VQ+ LAA+  L++     TVAD RF KP+D  LI  LA  H
Sbjct: 492 KGVIRREGKKIAILGFGTLVQAALAAAGKLDA-----TVADMRFVKPIDRELILDLAGRH 546

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + ++TVE+  I GG GS V++ L+  G+    +    L LPD +IDHG  +  LA  GL 
Sbjct: 547 DAIVTVEDACIMGGAGSAVLETLSAAGV---QIPVLQLGLPDEFIDHGEQSALLAGLGLD 603

Query: 538 PSHIAATV 545
            + I  ++
Sbjct: 604 AAGIEQSI 611


>gi|434391679|ref|YP_007126626.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gloeocapsa sp. PCC 7428]
 gi|428263520|gb|AFZ29466.1| 1-deoxy-D-xylulose-5-phosphate synthase [Gloeocapsa sp. PCC 7428]
          Length = 635

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/555 (46%), Positives = 349/555 (62%), Gaps = 25/555 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES +D FG GH+STSISA LGMA+ RDLKG K  V AVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCESPFDHFGAGHASTSISAALGMALARDLKGEKFKVAAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN+    P          VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN---------VGAISRHLNKMRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   KQI      L  +++ +  GM    +   G+ +FEELG  Y+GPVDGH
Sbjct: 198 VQFLSDNLEEQVKQIPFVGDSLETELERFKEGMKRLAVPKVGA-VFEELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+   ++    K  GPVL+HV T KG+GY  AE+    YH  + F+  TGK   SS
Sbjct: 257 NLEELITTFKQAH--KIGGPVLVHVATVKGKGYAIAEQDQVGYHAQSPFNLTTGKAIPSS 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +   Y+  FA AL+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAV
Sbjct: 315 KPKPPGYSKVFAHALVKLAENNPKIVGITAAMATGTGLDKLQAKLPQQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QR YDQ+VHDV +Q LPV F MDRAG+VGADGPTH G 
Sbjct: 375 TLAAGLACEGMRPVVAIYSTFLQRGYDQIVHDVCIQNLPVFFCMDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ CLPNMV+MAP DEAEL  MV T     + P   RYPRGNG GV  P   +G  
Sbjct: 435 YDIAYLRCLPNMVLMAPKDEAELQRMVVTGVNYTNGPIAMRYPRGNGYGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P+E+GKG  L  G+ V LLG+G+ V   +  + +L  +G++ TV +ARF KPLD  LI  
Sbjct: 493 PVEIGKGETLRHGDDVLLLGFGSMVYPAMQVAEILSEHGIQATVVNARFAKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    ++T+EEG + GGFGS V + L      D  V  +   +PD  +DH SP    A
Sbjct: 553 LAQRIGRVVTLEEGCLMGGFGSAVAEALLDA---DVVVPVKRFGIPDTLVDHASPDQSKA 609

Query: 533 QAGLTPSHIAATVFN 547
           + GLT   IA  V  
Sbjct: 610 ELGLTSPQIAQEVLK 624


>gi|345877365|ref|ZP_08829115.1| 1-deoxy-D-xylulose 5-phosphate synthase [endosymbiont of Riftia
           pachyptila (vent Ph05)]
 gi|344225605|gb|EGV51958.1| 1-deoxy-D-xylulose 5-phosphate synthase [endosymbiont of Riftia
           pachyptila (vent Ph05)]
          Length = 583

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/486 (53%), Positives = 327/486 (67%), Gaps = 22/486 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G SGF KRSES+YD FGTGHSSTSISA LGMAV    KG    VVAVIGDG+
Sbjct: 100 MAKLRQQGGPSGFPKRSESDYDTFGTGHSSTSISAALGMAVAARRKGESRKVVAVIGDGS 159

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           + AG A+EA+N+AG LD D++V+LNDNK +S+          PVGA S+ LSRL S    
Sbjct: 160 IGAGMAFEALNHAGVLDQDLLVVLNDNK-MSISK--------PVGAFSNHLSRLLSGTLY 210

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K +   +   + EL  + +E+ +GM+     T+FEELG  YIGP+DGH++D L
Sbjct: 211 TGMREGGKSLLSHLPSQVSELMGRWEEHMKGMVLPG--TMFEELGFNYIGPIDGHDLDTL 268

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  +  +K +GP L+HVVT+KGRGY  AE++   YHGV  F+PATG+  K      S
Sbjct: 269 VPTLRNM--SKLSGPCLLHVVTQKGRGYEPAEESPIAYHGVTPFNPATGEMTKGGG-GPS 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L A AE D+ ++AI  AM  G+G+  F RRFP R FDVGIAEQHA+T AAG+
Sbjct: 326 YTQIFGDWLCATAEKDERLLAITPAMCEGSGMVEFARRFPKRYFDVGIAEQHALTLAAGM 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYSSF+QRAYDQ++HDV LQ L V  A+DRAG VGADG TH GSFD+++ 
Sbjct: 386 ACEGAKPVVAIYSSFLQRAYDQLIHDVVLQNLDVTLAVDRAGQVGADGATHAGSFDLSYA 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNM++MAPSDE E   M+ TA      P+  RYPRG G G E+    K  PLE+G+G
Sbjct: 446 RVLPNMLIMAPSDENECSRMLQTAYDYPG-PAMVRYPRGGGTGAEVEQPAK--PLELGQG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R+  EG RVALL +G+ +Q+ LAA+  L++     TVAD RF KPLD AL+  LA  HE+
Sbjct: 503 RLRREGCRVALLSFGSLLQTALAAAEQLDA-----TVADMRFVKPLDEALVLDLASRHEL 557

Query: 481 LITVEE 486
           L+T+EE
Sbjct: 558 LVTLEE 563


>gi|323702780|ref|ZP_08114440.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532297|gb|EGB22176.1| deoxyxylulose-5-phosphate synthase [Desulfotomaculum nigrificans
           DSM 574]
          Length = 639

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 270/550 (49%), Positives = 346/550 (62%), Gaps = 27/550 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GLSGF KR ES +D F TGHSSTSISA LGM + RDLKG K +VVAVIGDG+MT
Sbjct: 91  TLRQYGGLSGFPKRDESIHDAFDTGHSSTSISAALGMVLARDLKGEKYSVVAVIGDGSMT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN-RPLR 121
            G A+EA+N+AG+L  ++IVILNDN+    P          VGALSS LS L+++ +  R
Sbjct: 151 GGMAFEALNHAGHLKKNLIVILNDNEMSIAPN---------VGALSSYLSSLRTDPKYSR 201

Query: 122 ELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHNV 177
              E+A+ + K   GP  +L   VD     +    + G    LFEELG  Y+GPVDGH++
Sbjct: 202 SKDEIAELLQKIPHGP--KLLKVVDRLKDSLKYLVVPG---MLFEELGFTYLGPVDGHDI 256

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             +  +L++ KN    GPVL+HV+T+KG+GY  AEK  D +HGV  FD  TG   K    
Sbjct: 257 KAVTTMLKQAKNL--GGPVLVHVLTKKGKGYEPAEKNPDLFHGVGPFDVVTGAIKKIPGA 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F + +I  A+ D  ++ I AAM  GTGLN F + FP R FDVGIAEQHAVT A
Sbjct: 315 PPSYTQIFGQTMINLAKQDDKIIGITAAMPSGTGLNKFAQEFPNRYFDVGIAEQHAVTMA 374

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA  G +P  AIYS+F+QRAYDQV+HDV LQ LPV FA+DRAGLVG DGPTH G FD+
Sbjct: 375 AGLAAGGYRPVVAIYSTFLQRAYDQVLHDVCLQNLPVTFALDRAGLVGDDGPTHHGVFDL 434

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            ++  +PNMV+MAP DE EL HM+ T A   + P+  RYPRG G GV +    + IP  +
Sbjct: 435 AYLRSIPNMVIMAPKDENELQHMLKT-AVYHNAPTAVRYPRGAGEGVAIDSQLQTIP--I 491

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           G+  +L +GE V LL  G  V   L A+  L + G+   V +AR+ KPLD  LI   A  
Sbjct: 492 GQAEVLWDGEDVVLLAIGNMVPEALKAAENLRAQGISAAVINARYVKPLDEELILHYAAR 551

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              L+TVEE  + GGFGS V++ L + GL +  VK + + +PD +++HG      A  GL
Sbjct: 552 TGHLVTVEEHVLMGGFGSAVLELLERAGLSE--VKVKRIGIPDCFVEHGKQKILRANYGL 609

Query: 537 TPSHIAATVF 546
           T   IA TV 
Sbjct: 610 TAEGIAETVL 619


>gi|344171952|emb|CCA84578.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia syzygii R24]
          Length = 636

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/554 (47%), Positives = 356/554 (64%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMALGAKTQGENRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y +  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPAAR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHA T
Sbjct: 316 PSKISYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPNRYYDVGIAEQHAAT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VMAP+DE E   +++TA A  D P+  RYPRG G GV + P  + +P+
Sbjct: 436 DMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDCPTAVRYPRGAGSGVAVLPTLEPLPV 494

Query: 416 ---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +      G RVA+L +G+ V    AA+  L++     TV + RF KPLD A + 
Sbjct: 495 GKAEVRRASTAPAGRRVAILAFGSMVAPATAAAERLDA-----TVVNMRFVKPLDVACVL 549

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR++DHG  A  L
Sbjct: 550 EMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFVDHGDHAALL 606

Query: 532 AQAGLTPSHIAATV 545
           AQ GL  + I A++
Sbjct: 607 AQCGLDANGILASI 620


>gi|39995792|ref|NP_951743.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           PCA]
 gi|409911234|ref|YP_006889699.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           KN400]
 gi|81703187|sp|Q74FC3.1|DXS1_GEOSL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|39982556|gb|AAR34016.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           PCA]
 gi|298504800|gb|ADI83523.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter sulfurreducens
           KN400]
          Length = 637

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 261/535 (48%), Positives = 341/535 (63%), Gaps = 23/535 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT RQ  G+SGF KRSES +D F TGHSSTSISAGLGMA+ R+L+G  N VVAVIGDG+
Sbjct: 89  FHTQRQYGGISGFPKRSESSHDAFDTGHSSTSISAGLGMAMARELRGGSNKVVAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G A+EA+N AG+L  ++IV+LNDN ++S+         P VGA SS +SR  +    
Sbjct: 149 MTGGIAFEALNQAGHLKKNLIVVLNDN-EMSIS--------PNVGAFSSFVSRKLTGSYF 199

Query: 121 RELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           REL++  +G+ + I   G  + + A + +   +G ++     LFE LG  YIGP+ GHN+
Sbjct: 200 RELKKEVQGLLQNIPAIGKDILQFARRAENSLKGFLTPG--MLFEALGFDYIGPIQGHNL 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ + E  +     GPV++HV+T KG+GY  AE     +HGV  FD ATGK   S   
Sbjct: 258 PQLLEVFENARGLD--GPVVVHVMTTKGKGYVPAETNPSAFHGVGPFDVATGKTTGSKPG 315

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F + L   A  ++ +VAI AAM  GTGL  F + FP R FDVGIAEQHAVTFA
Sbjct: 316 AASYTGIFGDTLAQLARENEKIVAITAAMPDGTGLTGFAKEFPERFFDVGIAEQHAVTFA 375

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA EG +P  AIYS+F+QRAYDQV HDV LQ LPV FA+DR G+VG DGPTH G FD+
Sbjct: 376 AGLAAEGFRPVTAIYSTFLQRAYDQVFHDVCLQNLPVVFALDRGGVVGDDGPTHHGVFDL 435

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +++  LP M +MAP DE EL HM+ TA +  D P   RYPRG G G+ L    + IP  +
Sbjct: 436 SYLRHLPGMTLMAPKDENELRHMLKTAVS-HDGPIALRYPRGAGCGIPLDQELREIP--I 492

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           G G IL EG+ VA++  G  V   L A+  L   G+R TV +ARF KPLD  +I   A+ 
Sbjct: 493 GTGEILAEGDDVAIIAIGITVLPALEAARTLAEKGIRATVINARFVKPLDREMILQAARR 552

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
              +IT EE ++ GGFGS V++ LA +G+    V+ + L +PDR+++ G P  QL
Sbjct: 553 TGCIITAEENALQGGFGSAVLELLADEGMTG--VRVKRLGIPDRFVEQG-PQPQL 604


>gi|171060047|ref|YP_001792396.1| deoxyxylulose-5-phosphate synthase [Leptothrix cholodnii SP-6]
 gi|229813281|sp|B1Y2X5.1|DXS_LEPCP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|170777492|gb|ACB35631.1| deoxyxylulose-5-phosphate synthase [Leptothrix cholodnii SP-6]
          Length = 639

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/556 (48%), Positives = 355/556 (63%), Gaps = 36/556 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R ESEYD FGT HSSTSISA LGMA+    KG K + VA+IGDG+
Sbjct: 91  MSTLRQLGGLSGFPRRDESEYDTFGTAHSSTSISAALGMALAAQQKGEKRHAVAIIGDGS 150

Query: 61  MTAGQAYEAMNNAGYLDS----DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS 116
           MTAG A+EA+NN G   +    +++VILNDN  +S+         PPVGAL+  L+RL S
Sbjct: 151 MTAGMAFEALNNGGMPHAGRVPNLLVILNDN-DMSIS--------PPVGALNKYLARLLS 201

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
            R     RE AK V K     + ELA + +E+A+GM+     T+FEE G  Y+GP+DGH+
Sbjct: 202 GRFYAAAREGAKSVLKS-APTLFELARRFEEHAKGMVVPG--TIFEEFGFNYVGPIDGHD 258

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D L+  LE +++    G   +HVVT+KG GY  AE     YHG  KFDP  G    ++ 
Sbjct: 259 LDALIPTLENLRDKP--GAQFLHVVTKKGYGYKLAEADPIAYHGPGKFDPQIGLVKPATP 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              ++T  F + L   A  D  +VAI  AM  G+G+  F +RFP R  DVGIAEQHAVTF
Sbjct: 317 PKTTFTQVFGQWLCDMAAADPKLVAITPAMREGSGMVEFHKRFPERYHDVGIAEQHAVTF 376

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLACEGL+P  AIYS+F+QRAYDQ++HDV LQ LP+ FA+DRAGLVGADG TH G++D
Sbjct: 377 AAGLACEGLRPVVAIYSTFLQRAYDQLIHDVALQNLPMVFALDRAGLVGADGATHAGAYD 436

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + F+ C+PNM ++AP+DEAE    ++TA A  D P   RYPRG+G G  +  G + +P  
Sbjct: 437 IAFVRCIPNMSLLAPADEAETRRALSTAFA-HDGPVAVRYPRGSGAGTAVETGFETLPW- 494

Query: 417 VGKGRIL------IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            G+G +       + G R+A+L +GT +   LAA+  L++     TVA+ RF KPLD AL
Sbjct: 495 -GRGEVRRQAGGHVRGPRIAILAFGTLLYPALAAAEKLDA-----TVANMRFIKPLDAAL 548

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           +  LA++H+ L+TVEEG + GG GS V++ L   GL    +    L LPD++I+HG PA 
Sbjct: 549 VEQLARTHDALVTVEEGCLMGGAGSAVLEALQAAGLQTPVLT---LGLPDQFIEHGDPAL 605

Query: 530 QLAQAGLTPSHIAATV 545
            LA  GL  + I A +
Sbjct: 606 LLAACGLDSAGIEAAI 621


>gi|427701934|ref|YP_007045156.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobium gracile PCC
           6307]
 gi|427345102|gb|AFY27815.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobium gracile PCC
           6307]
          Length = 639

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/558 (46%), Positives = 355/558 (63%), Gaps = 26/558 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  G++G+ KRSES +D FG GH+STSISA LGMA+ RD +G     VAVIGDGA
Sbjct: 87  FHTLRQQGGVAGYLKRSESRFDHFGAGHASTSISAALGMALARDRRGEDFKCVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN  +S+         PPVGALS+ L+R++ ++P
Sbjct: 147 LTGGMALEAINHAGHLPRTKLLVVLNDN-DMSIS--------PPVGALSTHLNRMRLSKP 197

Query: 120 LRELREVAKGVTKQI----GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH 175
           ++ L   A+   K +    G    EL    +   R  +   G+ +FEELG  Y+GP+DGH
Sbjct: 198 VQFLSGSAEEAVKHLPFLHGELPTELKTLKESMKRLAVPKVGA-VFEELGFTYVGPIDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           ++ ++V   +     +  GPVL+HV T KG+GYPYAE     YH  + FD ATGK + SS
Sbjct: 257 DIPEMVRTFQAAH--RCEGPVLVHVATTKGKGYPYAEADQVGYHAQSAFDLATGKAYPSS 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  S++  F + L+   E D  VV I AAM  GTGL+L  R  P + FDVGIAEQHAV
Sbjct: 315 KPKPPSWSKVFGQTLVKICEQDSRVVGITAAMATGTGLDLLERALPNQYFDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAG+ACEGL+P  AIYS+F+QRAYDQ++HDV +QKLPV F +DRAG+VGADGPTH G 
Sbjct: 375 TMAAGMACEGLRPVVAIYSTFLQRAYDQLIHDVGIQKLPVTFVLDRAGIVGADGPTHQGQ 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D++++  +PN  VMAP DEAEL  M+ T+ A  D P   R PRG G GV  P  ++G  
Sbjct: 435 YDISYLRAVPNFTVMAPKDEAELQRMLVTSIA-HDGPCAIRIPRGEGEGV--PLMDEGWQ 491

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PLE+G+G +L +G+ + ++ YG  V   +A + LL+  GLR  V +ARF +PLD ALI  
Sbjct: 492 PLEIGRGELLTDGDDLLIVAYGAMVAPAMATAGLLQEKGLRAAVVNARFLRPLDEALILP 551

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA     ++T+EEG++ GGFG+ VV+ L    L    V    L +PD  +DH SP     
Sbjct: 552 LAHRIGRVVTMEEGALPGGFGAAVVESLNDHDL---PVPVLRLGIPDVLVDHASPDQSKE 608

Query: 533 QAGLTPSHIAATVFNILG 550
           + GLTPS +A  +    G
Sbjct: 609 RLGLTPSQMAERILERFG 626


>gi|452879303|ref|ZP_21956424.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           VRFPA01]
 gi|452184117|gb|EME11135.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           VRFPA01]
          Length = 627

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/546 (47%), Positives = 358/546 (65%), Gaps = 28/546 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+G++   VAVIGDGA
Sbjct: 102 MGTLRQKDGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGKERKSVAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D+DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHASEVDADMLVILNDN-DMSISHN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  +++ K  GP  +HVVT+KG+G+  AE     YH + K + A G   K +   + 
Sbjct: 270 VATLRNMRDMK--GPQFLHVVTKKGKGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK- 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y++ F + L   A  D  ++ I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 326 YSSVFGQWLCDMAAQDARLLGITPAMKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGM 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 386 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYL 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  ++ T    D  P+  RYPRG+G    + P  +  P+E+GKG
Sbjct: 446 RCIPGMLVMTPSDEDELRKLLTTGYLFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G +VALL +G  +     A A+  + GL  TVAD RF KPLD AL+R LA SHE+
Sbjct: 503 VVRRRGGKVALLVFGVQL-----AEAMKVAEGLDATVADMRFVKPLDEALVRELAGSHEL 557

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+++EE ++ GG GS V +FLA++GL    V    L LPD Y++H  P++ LA+ GL  +
Sbjct: 558 LVSIEENAVMGGAGSAVGEFLAREGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDVA 614

Query: 540 HIAATV 545
            I   V
Sbjct: 615 GIEKAV 620


>gi|152984765|ref|YP_001346443.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA7]
 gi|166201528|sp|A6V058.1|DXS_PSEA7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|150959923|gb|ABR81948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           PA7]
          Length = 627

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/546 (47%), Positives = 358/546 (65%), Gaps = 28/546 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+G++   VAVIGDGA
Sbjct: 102 MGTLRQKDGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGKERKSVAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D+DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHASEVDADMLVILNDN-DMSISHN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  +++ K  GP  +HVVT+KG+G+  AE     YH + K + A G   K +   + 
Sbjct: 270 VATLRNMRDMK--GPQFLHVVTKKGKGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK- 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y++ F + L   A  D  ++ I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 326 YSSVFGQWLCDMAAQDARLLGITPAMKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGM 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 386 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYL 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  ++ T    D  P+  RYPRG+G    + P  +  P+E+GKG
Sbjct: 446 RCIPGMLVMTPSDEDELRKLLTTGYLFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G +VALL +G  +     A A+  + GL  TVAD RF KPLD AL+R LA SHE+
Sbjct: 503 VVRRRGGKVALLVFGVQL-----AEAMKVAEGLDATVADMRFVKPLDEALVRELAGSHEL 557

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+++EE ++ GG GS V +FLA++GL    V    L LPD Y++H  P++ LA+ GL  +
Sbjct: 558 LVSIEENAVMGGAGSAVGEFLAREGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAA 614

Query: 540 HIAATV 545
            I   V
Sbjct: 615 GIEKAV 620


>gi|386332877|ref|YP_006029046.1| 1-deoxy-d-xylulose-5-phosphate synthase protein [Ralstonia
           solanacearum Po82]
 gi|334195325|gb|AEG68510.1| 1-deoxy-d-xylulose-5-phosphate synthase protein [Ralstonia
           solanacearum Po82]
          Length = 637

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/555 (47%), Positives = 356/555 (64%), Gaps = 33/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMAQGAKTRGESRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVA-KFDPATGKQFKS 234
             LV  L+ ++     G  P  +HVVT+KG+GY  AE    KYH  + +FDPA G    +
Sbjct: 256 GSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPVKYHAASGRFDPAVGFAKPA 315

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           +    SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAV
Sbjct: 316 TPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAV 375

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G+
Sbjct: 376 TFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGA 435

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D+ ++ C+PNM+VMAP+DE E   +++TA A  D P+  RYPRG G GV + P    +P
Sbjct: 436 YDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDCPTAVRYPRGAGPGVAVQPTLDPLP 494

Query: 415 L---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALI 471
           +   EV +      G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A +
Sbjct: 495 VGKAEVRRASTAPAGQRVAILAFGSMVAPATAAAERLDA-----TVVNMRFVKPLDVACV 549

Query: 472 RSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQ 530
             +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR+IDHG  A  
Sbjct: 550 LEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFIDHGDHAAL 606

Query: 531 LAQAGLTPSHIAATV 545
           LA  GL  + I A++
Sbjct: 607 LALCGLDANGILASI 621


>gi|404493292|ref|YP_006717398.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus
           DSM 2380]
 gi|118595596|sp|Q3A3Z6.1|DXS_PELCD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|77545349|gb|ABA88911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter carbinolicus
           DSM 2380]
          Length = 634

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/555 (47%), Positives = 347/555 (62%), Gaps = 23/555 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  G+SGF KR ES YD F  GHSSTSISA LGMA  RD K  K   VAVIGDG++T
Sbjct: 90  TLRQLGGISGFPKREESPYDAFDVGHSSTSISAALGMAAARDCKNGKEKFVAVIGDGSLT 149

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+EA+N AG  + ++IVILNDN ++S+           VGALSS ++R  ++  +  
Sbjct: 150 GGMAFEALNQAGDQNKNLIVILNDN-EMSISQN--------VGALSSLINRKMTSELVVR 200

Query: 123 LREVAK---GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           L++ A+   G   +IG  + ++A K +E  +G  +     LFE  G  Y+GP++GH ++ 
Sbjct: 201 LKKEAENFLGHVPRIGKDLLKVARKAEESLKGFFTPG--MLFEAFGFDYVGPLNGHRLET 258

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  LE V N +  GPVL+HVVT KG+G+  AEK    +HGV  FD  TG+   S     
Sbjct: 259 LIPALENVANLE--GPVLVHVVTRKGKGFEPAEKNPSLFHGVGPFDKETGEVRASKGGPA 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           S+T  F   L A AE D  +VAI AAM  GTGL  F +R+P+R FDVGIAEQHAVTFAAG
Sbjct: 317 SFTGVFGSTLTAMAEKDDRIVAITAAMLEGTGLKEFSKRYPSRFFDVGIAEQHAVTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LAC+G++P  A+YS+F+QRAYD VVHDV LQ+LPV FA+DR GLVGADGPTH G FD +F
Sbjct: 377 LACQGMRPVVALYSTFLQRAYDNVVHDVALQRLPVTFAIDRGGLVGADGPTHHGVFDYSF 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  +PNMVV+AP DE EL   + T     D P  +RYPRG  +G+ELP   + +P  +GK
Sbjct: 437 LRHIPNMVVIAPRDEIELQRAMLTGTQ-HDGPLAYRYPRGKALGLELPDSVESMP--IGK 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G  L +G    +   G   +  L AS +L   GL + V D RF KPLD  L+ + A+   
Sbjct: 494 GEKLRDGSDAVIFALGVVCKEALVASDILAGEGLSVAVVDPRFLKPLDQQLLIAEARRTG 553

Query: 480 VLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           V++TVEE    GGFGS V++ LA +GL    V+   + LPDR+I+ G+     A+ GL  
Sbjct: 554 VVVTVEENVRQGGFGSAVLEMLADEGL---AVRVLRIGLPDRFIEQGTQQQLYARYGLDA 610

Query: 539 SHIAATVFNILGQTR 553
             IAA+V N +   R
Sbjct: 611 EGIAASVRNFMHHDR 625


>gi|421897746|ref|ZP_16328113.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum MolK2]
 gi|206588952|emb|CAQ35914.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum MolK2]
          Length = 637

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/555 (47%), Positives = 356/555 (64%), Gaps = 33/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMAQGAKTQGESRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVA-KFDPATGKQFKS 234
             LV  L+ ++     G  P  +HVVT+KG+GY  AE    KYH  + +FDPA G    +
Sbjct: 256 GSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPVKYHAASGRFDPAVGFAKPA 315

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           +    SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAV
Sbjct: 316 TPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAV 375

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G+
Sbjct: 376 TFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGA 435

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D+ ++ C+PNM+VMAP+DE E   +++TA A  D P+  RYPRG G GV + P    +P
Sbjct: 436 YDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDCPTAVRYPRGAGPGVAVQPTLDPLP 494

Query: 415 L---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALI 471
           +   EV +      G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A +
Sbjct: 495 VGKAEVRRASTAPAGQRVAILAFGSMVAPATAAAERLDA-----TVVNMRFVKPLDVACV 549

Query: 472 RSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQ 530
             +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR+IDHG  A  
Sbjct: 550 LEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFIDHGDHAAL 606

Query: 531 LAQAGLTPSHIAATV 545
           LA  GL  + I A++
Sbjct: 607 LALCGLDANGILASI 621


>gi|121604407|ref|YP_981736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas
           naphthalenivorans CJ2]
 gi|166198636|sp|A1VMD7.1|DXS_POLNA RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120593376|gb|ABM36815.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas
           naphthalenivorans CJ2]
          Length = 636

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/557 (47%), Positives = 351/557 (63%), Gaps = 27/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R ESEYD FGT HSSTSISA LGMA+  + KG   N VAVIGDG+
Sbjct: 89  MGTLRQLGGLSGFPRRDESEYDTFGTAHSSTSISAALGMALAAEFKGENRNAVAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EA+NNAG  D   ++V+LNDN  +S+         PPVGAL+  L++L S R 
Sbjct: 149 MSAGMAFEALNNAGVHDHCKLLVVLNDN-DMSIS--------PPVGALNRHLAQLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R V K V  Q+  P+ ELA +++ +A+GM+  +   +FE  G  YIGP+DGH+++ 
Sbjct: 200 YASARHVGKKVL-QVAPPLLELARRLESHAKGMVVPA--AVFESFGFNYIGPIDGHDLES 256

Query: 180 LVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           L+  LE +++   TG  P  +HVVT+KG+GY  AE     YHG  KFDP+ G Q  S+  
Sbjct: 257 LIPTLENIRHLMATGAGPQFLHVVTKKGQGYKLAEADPIAYHGPGKFDPSMGLQKSSAPA 316

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
            Q++T  F   L   AE D  +V I  AM  G+G+  F +RFP R  DVGIAEQHAVTFA
Sbjct: 317 KQTFTQVFGRWLCDMAEHDPRLVGITPAMREGSGMVEFHKRFPKRYHDVGIAEQHAVTFA 376

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AG+ACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+
Sbjct: 377 AGMACEGLKPVLAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDI 436

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            ++ C+PNM +  P+DE E   ++ TA    D P   RYPRG G GVE   G K +P   
Sbjct: 437 PYLRCIPNMGIACPADENECRKLLTTAFE-QDSPVAVRYPRGAGAGVEPEAGLKSLPF-- 493

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG I  EG  +A+L +GT +   L A+  L +     TV + R+ KPLD  L+  +A  
Sbjct: 494 GKGEIRREGSGIAILAFGTLLYPALQAAEKLGA-----TVVNMRWAKPLDTELLLKVAAG 548

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           HEVL+T+EEG+I GG GS V + L   G++   ++   L L D +I+HG  A  LA  GL
Sbjct: 549 HEVLVTLEEGAIMGGAGSAVGEALQAAGVVKPLLQ---LGLKDEFIEHGEVAVLLALQGL 605

Query: 537 TPSHIAATVFNILGQTR 553
             + I A V +  G  +
Sbjct: 606 DAAGIEAAVRSRFGSFK 622


>gi|124267816|ref|YP_001021820.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum
           PM1]
 gi|171769840|sp|A2SJ46.1|DXS_METPP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|124260591|gb|ABM95585.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Methylibium petroleiphilum
           PM1]
          Length = 631

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/559 (47%), Positives = 356/559 (63%), Gaps = 31/559 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF +R ESEYD FGT HSSTSISA LGMA+   +KG     VA+IGDGA
Sbjct: 91  MAGLRQLGGISGFPRRDESEYDTFGTAHSSTSISAALGMALAAKIKGEDRRSVAIIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG   ++M+V+LNDN  +S+         PPVGAL+   +RL S R  
Sbjct: 151 MTAGMAFEALNNAGVSGANMLVVLNDN-DMSIS--------PPVGALNRYFARLMSGRFY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              R+ AK V K    P+ ELA + +E+A+GMI  S  T+FEE G  Y+GP+DGH++D L
Sbjct: 202 SAARQGAKSVLKN-APPLLELARRFEEHAKGMIVPS--TIFEEFGFTYVGPIDGHDLDSL 258

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +++ K  GP  +HVVT+KG GY  AE     YHG  KF+PA G + K++    S
Sbjct: 259 IPTLENLRDRK--GPQFLHVVTKKGYGYKLAEADPVAYHGPGKFNPAEGLK-KAAPGKPS 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D  +V I  AM  G+G+  F +RFP R FDVGIAEQHAVTFAAGL
Sbjct: 316 FTQVFGQWLCDMAAKDTRLVGITPAMREGSGMVEFEQRFPDRYFDVGIAEQHAVTFAAGL 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QR YDQ++HDV +Q LPV FA+DRAG+VGADG TH G++D+ ++
Sbjct: 376 ACEGLKPVVAIYSTFLQRGYDQLIHDVAIQNLPVVFALDRAGIVGADGATHAGAYDIAYV 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P++ ++AP+DE E    + TAA     P   RYPRG G+GV +      +P   G+G
Sbjct: 436 RCVPHLSLIAPADENECRQAL-TAAFEQQHPVAVRYPRGAGVGVAVQSELTALPW--GRG 492

Query: 421 RI----LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
            +       G R+A+L +GT +   LAA+  L++     TVA+ RF KPLD  L+ SLA+
Sbjct: 493 ELRREARGGGRRIAILAFGTLLYPALAAAEKLDA-----TVANMRFIKPLDTELVLSLAR 547

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           SHE L+TVEEG + GG GS V++ L   G+    +    L LPD +++HG PA  LAQ G
Sbjct: 548 SHEALVTVEEGCLQGGAGSAVLEALQAAGV---NLPVLTLGLPDEFVEHGDPAKLLAQLG 604

Query: 536 LTPSHIAATVFNILGQTRE 554
           L  + I  ++    G   E
Sbjct: 605 LDAAGIEQSILKRFGAKLE 623


>gi|386022368|ref|YP_005940393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           4166]
 gi|327482341|gb|AEA85651.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri DSM
           4166]
          Length = 632

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 349/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +R ESEYD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPPVPKKPAGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYPDRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + P  +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNASIEPALE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G +VALL +G  +   L     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRQGSKVALLVFGVQLPEALQVGEALDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+TVEE SI GG GS V +FLA +G+L      RP++   LPD Y++H  P++ LA+ GL
Sbjct: 560 LVTVEENSIMGGAGSAVAEFLAAEGVL------RPILHLGLPDYYVEHAKPSEMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A V
Sbjct: 614 DAAGIEAAV 622


>gi|222056744|ref|YP_002539106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
 gi|221566033|gb|ACM22005.1| deoxyxylulose-5-phosphate synthase [Geobacter daltonii FRC-32]
          Length = 636

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/553 (47%), Positives = 350/553 (63%), Gaps = 23/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT RQ  G+SGF KRSES +D FG GHSSTSISAGLGMAV   LKG  + V+AVIGDG+
Sbjct: 89  FHTQRQYQGISGFPKRSESAHDAFGAGHSSTSISAGLGMAVANCLKGDPSKVIAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G A+EA+N AG+L  +++V+LNDN ++S+           VGALS+ +SR  +    
Sbjct: 149 LTGGMAFEALNQAGHLRKNLVVVLNDN-EMSISKN--------VGALSTFISRKLTGNYY 199

Query: 121 RELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           R+L++  + + + I   GG +   A K +   +G ++    TLFE LG  YIGPV GH++
Sbjct: 200 RDLKKEMQRLLQNIPAIGGNILHFARKAENSLKGFLTPG--TLFEALGFEYIGPVHGHDL 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ I++ V++ +  GPVL+HVVT KG+GY  AE   DK+HGV  FD  TGK       
Sbjct: 258 PQLIEIMQNVRSLE--GPVLVHVVTTKGKGYQPAEDTPDKFHGVGPFDIKTGKVTGGKPG 315

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F + L   AE D+ +VAI AAM  GTGL  F R FP R FDVGIAEQHA+TFA
Sbjct: 316 AASYTGIFGDTLCKLAEEDEKIVAITAAMPDGTGLTKFSRTFPDRFFDVGIAEQHALTFA 375

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AG+A EG +P  AIYS+F QRAYDQ+ HD+ LQKLPV  A+DRAGLVG DGPTH G FD+
Sbjct: 376 AGMATEGFRPVAAIYSTFAQRAYDQIFHDICLQKLPVTLALDRAGLVGDDGPTHHGVFDL 435

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +++  LP M VMAP DE EL HM+ T A   D+P   RYPRG G GV +    K IPL V
Sbjct: 436 SYLRHLPEMTVMAPKDENELQHMLKT-AIYSDQPIALRYPRGAGYGVAMDSILKTIPLGV 494

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
            +   L +GE + L+  G+ V   + A+  L++ G++  V +ARF KPLD  LI S A  
Sbjct: 495 AEQ--LAKGEDITLIAIGSTVYPAMEAAEQLKAKGIKACVINARFVKPLDRNLILSAAGR 552

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              ++TVEE ++ GGFG+ +++ L+ +G     +K + + +PDR+I+ GS A      GL
Sbjct: 553 SGCVVTVEENALQGGFGTAIMELLSDEG---AGIKVKRIGIPDRFIEQGSQAQLRKDLGL 609

Query: 537 TPSHIAATVFNIL 549
             + IA    + L
Sbjct: 610 DAAGIAQVAEDFL 622


>gi|350570639|ref|ZP_08938989.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
           9715]
 gi|349795412|gb|EGZ49211.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria wadsworthii
           9715]
          Length = 626

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 269/553 (48%), Positives = 352/553 (63%), Gaps = 46/553 (8%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ  GL+GF KRSESEYD FG GHSSTSI A LGMAV   L GR N  VA+IGDGA
Sbjct: 90  MHTMRQYSGLAGFPKRSESEYDDFGVGHSSTSIGAALGMAVADKLAGRSNRSVAIIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EA+NNAG +D D++VILNDN ++S+         P VGAL   L+    +  +
Sbjct: 150 MTAGQAFEALNNAGDMDIDLLVILNDN-EMSIS--------PNVGALPKYLA----SNVV 196

Query: 121 RELREVAKGVTKQIGGPMH------ELAAKVDEYARGMIS-----GSGSTLFEELGLYYI 169
           R++R V   +  Q G  +       E+A KV+   + + S         +LFE  G  Y 
Sbjct: 197 RDMRGVLSTIKNQTGKVLDKLPGALEIAQKVEHKIKAIASEGDHIKQSLSLFENFGFEYT 256

Query: 170 GPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATG 229
           GPVDGHNV+ LV +L E+++ K  GP L+HV+T+KG GY  AE+   KYH + K   A+ 
Sbjct: 257 GPVDGHNVEHLVDVLRELRSKK--GPQLLHVITKKGNGYKLAERDPVKYHAIGKTPTASE 314

Query: 230 KQFKSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
               ++    +YT  F + LI +AE D  +VAI  AM  G+GL  F +RFP R FDVGIA
Sbjct: 315 ADKPAAPPKPTYTQIFGQWLIDQAEADNRLVAITPAMREGSGLVEFEQRFPERYFDVGIA 374

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFAAGLAC+G KP  AIYS+F+QR YDQ+VHDV LQ LPV FA+DRAG+VGADGP
Sbjct: 375 EQHAVTFAAGLACQGAKPVVAIYSTFLQRGYDQLVHDVALQNLPVMFAVDRAGIVGADGP 434

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G +D++F+ C+PNMV+ APSDEAE   +++T  A+ D P+  RYPRG+G G  +P  
Sbjct: 435 THAGVYDLSFLRCIPNMVIAAPSDEAECRLLLSTCYAL-DAPTVVRYPRGSGNGA-VPAA 492

Query: 410 N-KGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDH 468
           N + +PL  GKG I  +G + A+L +G+ V+  L  +  L +     TVAD RF KPLD 
Sbjct: 493 NLETVPL--GKGIIRRQGNKTAILAFGSMVRPSLGVAEKLNA-----TVADMRFVKPLDE 545

Query: 469 ALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDH 524
            LI  LA+ H+ L+  EE +  GG GS V++ LA+  +       +P++L    D   +H
Sbjct: 546 PLILQLAREHDYLVCTEENAEQGGAGSAVLELLAKHKIC------KPVLLAAIEDIVTEH 599

Query: 525 GSPADQLAQAGLT 537
           G PA  L Q GL+
Sbjct: 600 GDPALLLDQLGLS 612


>gi|443468786|ref|ZP_21058993.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas
           pseudoalcaligenes KF707]
 gi|442898005|gb|ELS24822.1| 1-deoxy-D-xylulose 5-phosphate synthase [Pseudomonas
           pseudoalcaligenes KF707]
          Length = 631

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/557 (46%), Positives = 357/557 (64%), Gaps = 31/557 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   ++G +   +AVIGDGA
Sbjct: 102 MATLRQKDGVAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARMQGSERKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + +DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHASDVQADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P              
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEADPIGYHAITKLEPIKAPATPKKPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAGQDPRLVGITPAMKEGSDLVAFAERFPDRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+G KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACDGAKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  ++ T    +  P+  RYPRG+G    + P  K +  E+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRLLLTTGHHFEG-PAAVRYPRGSGPNSPIDPELKTV--EIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G +VALL +G  +     A AL  ++GL  TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRQGSKVALLVFGVQL-----AEALQVADGLDATVVDMRFVKPLDEALVRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE S+ GG G+ V +FLA++ LL   +    L LPD Y++H  PA+ LA+ GL  +
Sbjct: 560 LVTVEENSVMGGAGAAVSEFLARENLLKPILH---LGLPDYYVEHAKPAEMLAECGLDAA 616

Query: 540 HIAATVFNILGQTREAL 556
            + A+V     +TR AL
Sbjct: 617 GVEASV-----RTRMAL 628


>gi|428314255|ref|YP_007125232.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus sp. PCC 7113]
 gi|428255867|gb|AFZ21826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus sp. PCC 7113]
          Length = 635

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 350/554 (63%), Gaps = 23/554 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR E+++D FG GH+STSISA LGMA+ RD+KG    V AVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAALGMAMARDIKGENFKVAAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG++ ++ ++V+LNDN+    P          VGA+S  L++++ N  
Sbjct: 147 LTGGMALEAINHAGHMPNTKVLVVLNDNEMSISPN---------VGAISRYLNKVRLNPQ 197

Query: 120 LRELREVAKGVTKQ---IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L +  +   K    +G  +    A+V E  + +       + EELG  Y+GPVDGHN
Sbjct: 198 IQFLTDNLEEQFKHLPFVGESLSPELARVKEGMKRLAVPKVGAVIEELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK-SS 235
           ++DL+A  +   N    GPVL+HV T KG+GY  AE+    YH  + FD ATGK    SS
Sbjct: 258 LEDLIATFKAAHNH--NGPVLVHVATVKGKGYAIAEQDQVGYHAQSPFDLATGKAIPASS 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  FA  L+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPSYSKVFAHTLVKLAENNPKIVGITAAMATGTGLDKLHAKLPKQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLACEG++P  AIYS+F+QRAYDQ+VHDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLACEGIRPVVAIYSTFLQRAYDQIVHDVCIQNLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D+ ++ CLPNMV+MAP DEAEL  M+ T     D P   R+PRGNG GV  P   +G  P
Sbjct: 436 DIAYLRCLPNMVLMAPKDEAELQRMLVTGVNYTDGPIAMRFPRGNGYGV--PLMEEGWEP 493

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           L +GKG IL  G+ V L+GYGT V + +  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 494 LPIGKGEILRNGDDVLLVGYGTMVHTAMQTAEILSEHGIEATVINARFAKPLDTELILPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFGS + + L    +L   ++   L +PD  ++H  P +  A 
Sbjct: 554 AQRIGRVVTLEEGCVMGGFGSGLAETLLDHNVLVPVMR---LGVPDLLVEHAKPEESKAD 610

Query: 534 AGLTPSHIAATVFN 547
            GLTPS IA  V N
Sbjct: 611 LGLTPSQIAERVRN 624


>gi|83746514|ref|ZP_00943565.1| 1-deoxy-D-xylulose 5-phosphate synthase [Ralstonia solanacearum
           UW551]
 gi|207743825|ref|YP_002260217.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum IPO1609]
 gi|83726845|gb|EAP73972.1| 1-deoxy-D-xylulose 5-phosphate synthase [Ralstonia solanacearum
           UW551]
 gi|206595225|emb|CAQ62152.1| 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum IPO1609]
          Length = 636

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/554 (47%), Positives = 354/554 (63%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMAQGAKTQGESRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
             LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +  + 
Sbjct: 256 GSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPATR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VMAP+DE E   +++TA A  D P+  RYPRG G GV + P    +P+
Sbjct: 436 DMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDCPTAVRYPRGAGPGVAVQPTLDPLPV 494

Query: 416 ---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +      G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A + 
Sbjct: 495 GKAEVRRASTAPAGQRVAILAFGSMVAPATAAAERLDA-----TVVNMRFVKPLDVACVL 549

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR+IDHG  A  L
Sbjct: 550 EMARTHDYVVTVEEGCVMGGAGSACLEVLAAAGVATPVLQ---LGLPDRFIDHGDHAALL 606

Query: 532 AQAGLTPSHIAATV 545
           A  GL  + I A++
Sbjct: 607 ALCGLDANGILASI 620


>gi|419839194|ref|ZP_14362612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           HK386]
 gi|386909905|gb|EIJ74569.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           HK386]
          Length = 621

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/550 (46%), Positives = 349/550 (63%), Gaps = 26/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV  + +      V VIGDGA
Sbjct: 91  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENASRKTVCVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG + +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 151 ITAGMAFEALNHAGSVHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSIY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D+L
Sbjct: 202 STLRDGSKKILDKVP-PVKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNIDEL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K + +  +
Sbjct: 261 VATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKHNTKP-T 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA GL
Sbjct: 318 YSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFATGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADGPTH G+FD++FM
Sbjct: 378 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLSFM 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM++M PSDE E   M+ T      +P+  RYPRGN IGVEL P      L +GK 
Sbjct: 438 RCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAIGVELTPLEM---LPIGKS 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+++A+L +GT + S L AS  L +     TV D RF KP+D  +I  LA++H+ 
Sbjct: 494 RLIREGQKIAILNFGTLLPSALEASEKLNA-----TVVDMRFVKPIDIEMINVLAQTHDY 548

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + L   GL   
Sbjct: 549 LVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALKDLGLDSK 605

Query: 540 HIAATVFNIL 549
            I   + N +
Sbjct: 606 GIEEKILNFV 615


>gi|387127050|ref|YP_006295655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophaga sp. JAM1]
 gi|386274112|gb|AFI84010.1| 1-deoxy-D-xylulose 5-phosphate synthase [Methylophaga sp. JAM1]
          Length = 611

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/546 (46%), Positives = 354/546 (64%), Gaps = 34/546 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           +HTMRQ  GLSGF KRSES YD FG GHSSTSISA LGMA+     G  N  VA+IGDGA
Sbjct: 94  LHTMRQPGGLSGFPKRSESNYDSFGVGHSSTSISAALGMAIAARATGSSNRSVAIIGDGA 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAGQAYEA+ +AG L++DM+V+LNDN ++S+           VG +++ L+RL S R  
Sbjct: 154 LTAGQAYEALAHAGDLNADMLVVLNDN-EMSISKN--------VGGMANYLARLLSGRFY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R  RE +K + ++I  P  E A + +E+ +GM+     TLFEE+G  YIGP+DGH++D L
Sbjct: 205 RSARESSKKMLEKIP-PAWEFARRTEEHVKGMMVPG--TLFEEMGFNYIGPIDGHDLDTL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  ++N+K  G   +H+VT+KG+G+  AE+   KYHGV+   PA  K+        +
Sbjct: 262 ITTLNNLRNSK--GAQFLHIVTKKGKGFKPAEQQPCKYHGVS---PANSKK-----SGPT 311

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F++ L       +D++AI  AM  G+GLN F +RFP R FDVGIAEQHAVT AAG+
Sbjct: 312 FTQVFSQWLCDMGTASEDLIAITPAMCEGSGLNDFAKRFPERYFDVGIAEQHAVTLAAGM 371

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH GSFD++++
Sbjct: 372 ACEGKKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGATHAGSFDLSYL 431

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM++M PS+E E   M+ T     + P+  RYPRG+G G  + P  +  PL + K 
Sbjct: 432 RCIPNMLIMTPSNENECRQMLTTGFH-HNGPAAVRYPRGSGNGTTIDP--QLDPLPLCKA 488

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +I   G++ A+L +GT + + L A+  +++     TV + RF KPLD A++  +A  HE+
Sbjct: 489 QICRSGQKTAILAFGTLLHAALDAAEQIDA-----TVVNMRFVKPLDTAVLDEIAAHHEL 543

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           +IT+EE ++ GG GS V ++  Q G        + + LPD +IDHG     L+  GL  S
Sbjct: 544 IITIEENAVMGGAGSAVNEYFQQQGR---AANIQMMGLPDYFIDHGDHGQMLSACGLDAS 600

Query: 540 HIAATV 545
            I  T+
Sbjct: 601 GIIDTI 606


>gi|409422488|ref|ZP_11259583.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. HYS]
          Length = 632

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/547 (46%), Positives = 352/547 (64%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MHTLRQKDGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQNDPRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D+DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVDADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK-SSARTQ 239
           +  L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 ITTLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPVDKPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + L   A  D+ +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG
Sbjct: 328 KYSAVFGQWLCDMAAADQRLVGITPAMKEGSDLVAFSERYPDRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG+G     P  N   PLE+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGSGPNA--PIENSLEPLEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  +++     TV D RF KPLD AL+R +A SH+
Sbjct: 505 GIVRRQGSKVALLVFGVQLSEALKVAEQIDA-----TVVDMRFVKPLDEALVREIAGSHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGAAVSEFLAREAVLKPMLH---LGLPDVYVEHAKPAQMLAECGLDA 616

Query: 539 SHIAATV 545
           + I A+V
Sbjct: 617 AGIEASV 623


>gi|333924274|ref|YP_004497854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           carboxydivorans CO-1-SRB]
 gi|333749835|gb|AEF94942.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           carboxydivorans CO-1-SRB]
          Length = 639

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 269/550 (48%), Positives = 345/550 (62%), Gaps = 27/550 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GLSGF KR ES +D F TGHSSTSISA LGM + RDLKG K +VVAVIGDG+MT
Sbjct: 91  TLRQYGGLSGFPKRDESIHDAFDTGHSSTSISAALGMVLARDLKGEKYSVVAVIGDGSMT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN-RPLR 121
            G A+EA+N+AG+L  ++IVILNDN+    P          VGALSS LS L+++ +  R
Sbjct: 151 GGMAFEALNHAGHLKKNLIVILNDNEMSIAPN---------VGALSSYLSSLRTDPKYSR 201

Query: 122 ELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHNV 177
              E+A+ + K   GP  +L   VD     +    + G    LFEELG  Y+GPVDGH++
Sbjct: 202 SKDEIAELLQKIPHGP--KLLKVVDRLKDSLKYLVVPG---MLFEELGFTYLGPVDGHDI 256

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             +  +L++ KN    GPVL+HV+T+KG+GY  AEK  D +HGV  FD  TG   K    
Sbjct: 257 KAVTTMLKQAKNL--GGPVLVHVLTKKGKGYEPAEKNPDLFHGVGPFDVVTGAIKKIPGA 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F + +I  A+ D  ++ I AAM  GTGLN F + FP R FDVGIAEQHAVT A
Sbjct: 315 PPSYTQIFGQTMINLAKQDDKIIGITAAMPSGTGLNKFAQEFPNRYFDVGIAEQHAVTMA 374

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA  G +P  AIYS+F+QRAYDQV+HDV LQ LPV FA+DRAGLVG DGPTH G FD+
Sbjct: 375 AGLAAGGYRPVVAIYSTFLQRAYDQVLHDVCLQNLPVTFALDRAGLVGDDGPTHHGVFDL 434

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            ++  +PNMV+MAP DE EL HM+ T A   + P+  RYPRG G GV +    + IP  +
Sbjct: 435 AYLRNIPNMVIMAPKDENELQHMLKT-AVYHNAPTAVRYPRGAGEGVAIDSQLQTIP--I 491

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           G+  +L +GE V LL  G  V   L A+  L + G+   V +AR+ KPLD  LI   A  
Sbjct: 492 GQAEVLWDGEDVVLLAIGNMVPEALKAAENLRAQGISAAVINARYVKPLDEELILHYAAR 551

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              L+TVEE  + GGFGS V++ L + GL +  VK + + +PD +++HG      A  GL
Sbjct: 552 TGHLVTVEEHVLMGGFGSAVLELLERAGLSE--VKVKRIGIPDCFVEHGKQKILRANYGL 609

Query: 537 TPSHIAATVF 546
           T   I  TV 
Sbjct: 610 TAEGIVETVL 619


>gi|153872363|ref|ZP_02001280.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS]
 gi|152071171|gb|EDN68720.1| Deoxyxylulose-5-phosphate synthase [Beggiatoa sp. PS]
          Length = 619

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/540 (47%), Positives = 349/540 (64%), Gaps = 30/540 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQT+G++GF KR ES YD FG GHSSTSISA LGMA+          VVA+IGDGA
Sbjct: 90  MSTLRQTNGIAGFPKRRESIYDTFGVGHSSTSISAALGMAIANHQLDSNRKVVAIIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPP-VGALSSALSRLQSNRP 119
           MTAG A+EA+N+AG +D++++VILNDN          D  I P VG LS+  +++ S++ 
Sbjct: 150 MTAGMAFEALNHAGDMDTNILVILNDN----------DMSISPNVGGLSNYFAKILSSQL 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
              +RE +K + +++   + ELA + +E+ +GM++    TLFEELG  YIGP+DGH   D
Sbjct: 200 YTSMREGSKHLLERMPT-VRELAKRTEEHVKGMVAPG--TLFEELGFNYIGPIDGH---D 253

Query: 180 LVAILEEVKNTKT-TGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           L  +L  +KN +   GP  +H++T+KG+G+P AE     YHGV+ FDP TG+    S   
Sbjct: 254 LPLLLSTLKNMRVLEGPQFLHIITQKGKGFPSAEDDPCVYHGVSAFDPKTGQMESKSTDA 313

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F++ L   A  D+ ++ I  AM  G+GL  F   FP R FDVGIAEQH+VT AA
Sbjct: 314 PTYTKIFSDWLCDMAAHDERLIGITPAMREGSGLVDFSTLFPDRYFDVGIAEQHSVTLAA 373

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+ACEGLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADGPTH GSFD+ 
Sbjct: 374 GIACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGPTHAGSFDLA 433

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++  +PNM++MAP+DE E   M  T    +  PS  RYPRG G+GV + P    +P  + 
Sbjct: 434 YLRSIPNMLIMAPADENECRQMFTTGFQYEG-PSAVRYPRGCGVGVPVMPKLTTLP--IA 490

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           + ++  +GE+VALL +GT     L A AL  +  L  TV + RF KPLD  +I  +AK H
Sbjct: 491 QAQLRRQGEQVALLVFGT-----LLAMALEAAEQLNATVVNMRFVKPLDVEMITQMAKQH 545

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           ++L+TVEE  I GG GS V ++L    L    +    L LPDR+++HG     LAQ GL+
Sbjct: 546 KLLVTVEENVIMGGAGSAVNEYLQTKALSTPVLN---LGLPDRFLEHGDTTTLLAQCGLS 602


>gi|434399693|ref|YP_007133697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stanieria cyanosphaera PCC
           7437]
 gi|428270790|gb|AFZ36731.1| 1-deoxy-D-xylulose-5-phosphate synthase [Stanieria cyanosphaera PCC
           7437]
          Length = 636

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/562 (45%), Positives = 352/562 (62%), Gaps = 23/562 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR E+++D FG GH+STSISA LGMA+ RD KG     VAVIGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRCENKFDHFGAGHASTSISAALGMALARDAKGEDYKCVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L +++++VILNDN ++S+         P VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPNTNLMVILNDN-EMSIS--------PNVGAISRYLNKVRLSDP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L +  +   K +   G  +     +V E  + +       + EELG  Y GP+DGHN
Sbjct: 198 IQFLSDNLEEQFKHLPFFGDSLTPEMERVKEGMKRLAVPKVGAVIEELGFKYFGPIDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           + +L++  ++    K TGPVL+HV T KG+GY  AEK    YH  + F+ ATGK   S+ 
Sbjct: 258 LQELISTFKQAH--KVTGPVLVHVATVKGKGYAIAEKDQVGYHAQSPFNLATGKAIPSNK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY   F   L   AE +  ++ I AAM  GTGL+   ++ P +  DVGIAEQHAVT
Sbjct: 316 PKPPSYAKVFTHTLTKLAENNPKIIGITAAMATGTGLDKLQQKLPKQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            +AGLACEG++P  AIYS+F+QRAYDQ++HD+ +Q LPV F MDRAG+VGADGPTH G +
Sbjct: 376 LSAGLACEGMRPLVAIYSTFLQRAYDQIIHDICIQNLPVFFCMDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGIP 414
           D+ ++ C+PNMV+MAP DEAEL  M+ T     D P   RYPRGNG+GV L   G + I 
Sbjct: 436 DIAYLRCIPNMVIMAPKDEAELQRMIVTGIDHTDSPIAMRYPRGNGVGVPLMEEGWEAI- 494

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
            E+GKG IL  G+ V LLGYGT V   L  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 495 -EIGKGEILRNGDDVLLLGYGTMVHPALQVAEILSEHGIEATVVNARFVKPLDTELILPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFGS V + L  + +L   V  +   +PD  +DH  P    A 
Sbjct: 554 AQRIGKVVTMEEGCLMGGFGSAVTEALQDNNVL---VPVKRFGIPDILVDHAEPNQSKAD 610

Query: 534 AGLTPSHIAATVFNILGQTREA 555
            GLT S +A  +      T++A
Sbjct: 611 LGLTSSQMAENILKAYFPTKQA 632


>gi|293604270|ref|ZP_06686677.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii
           ATCC 43553]
 gi|292817147|gb|EFF76221.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter piechaudii
           ATCC 43553]
          Length = 622

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/548 (48%), Positives = 354/548 (64%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +A+IGDGA
Sbjct: 90  MAQLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAIIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 150 MSAGMAFEAMNNAGVTPNINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA + +E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YATAKNVGRAVLQHVP-PVLELARRFEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  +  G   +HVVT+KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLKALQ--GLQFLHVVTKKGQGYKLAEADPVLYHGPGKFDPAVGIQQSKAPGKR 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F   L   AE D  +VAI  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFGNWLCDTAEQDTRLVAITPAMREGSGLVEFEKRFPLRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+FMQR YDQ +HDV LQ L V FA+DRAG+VGADG TH G++D  F
Sbjct: 376 VACEGQKPVVAIYSTFMQRGYDQFIHDVALQNLDVTFALDRAGIVGADGATHAGNYDTAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIG-VELPPGNKGIPLEVG 418
           + C+PNMVV  PSDE+E   +++T       P+  RYPRG G G VE   G     +E+G
Sbjct: 436 LRCVPNMVVATPSDESETRLLLSTCYQ-HPGPASVRYPRGAGCGAVE---GTGLDTVELG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           +G +  EG+++A+LG+GT VQ  LAA+  L++     TVAD RF KP+D  LI  LA+ H
Sbjct: 492 RGIVRREGKKIAILGFGTLVQPALAAAGKLDA-----TVADMRFVKPIDRELILDLARRH 546

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+E+ +I GG GS V++ L+ +G+    +    L LPD +IDHG  +  LA  GL 
Sbjct: 547 DALVTIEDAAIMGGAGSAVLEVLSAEGV---QIPVLQLGLPDVFIDHGEQSALLAGLGLD 603

Query: 538 PSHIAATV 545
              I  ++
Sbjct: 604 AEGIEQSI 611


>gi|239814578|ref|YP_002943488.1| 1-deoxy-D-xylulose-5-phosphate synthase [Variovorax paradoxus S110]
 gi|239801155|gb|ACS18222.1| deoxyxylulose-5-phosphate synthase [Variovorax paradoxus S110]
          Length = 632

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/551 (47%), Positives = 352/551 (63%), Gaps = 26/551 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+    KG   + VA+IGDGA
Sbjct: 103 MPTLRQIGGISGFPQRSESEYDTFGTAHSSTSISAALGMAMAAKQKGEDRHSVAIIGDGA 162

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+NNAG  D  ++VILNDN  +S+         PPVGAL+  L++L S    
Sbjct: 163 LTAGMAFEALNNAGVCDCKLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGNFY 213

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V +    P+ ELA + +++A+GM+  +  TLFE+ G  Y+GP+DGH++D L
Sbjct: 214 AAAKNVGKSVLRA-APPLFELAKRFEQHAKGMVVPA--TLFEQFGFNYVGPIDGHDLDSL 270

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  LE +K+    GP  +HVVT+KG+GY  AE     YHG  KFDP  G    ++   Q+
Sbjct: 271 VPTLENLKHLD--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPQVGLVKPTAVAKQT 328

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D  +V I  AM  G+GL  F +RFP R +DVGIAEQHAVTFAAGL
Sbjct: 329 FTQVFGQWLCDMAAHDGRLVGITPAMREGSGLVEFEQRFPDRYYDVGIAEQHAVTFAAGL 388

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 389 ACEGLKPVVAIYSTFLQRAYDQLIHDVAIQNLPVVFALDRAGLVGADGATHAGAYDIPFL 448

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++++A    + P   RYPRG G GV        +P   GKG
Sbjct: 449 RCIPNMSIACPADERECRQLLSSAYE-QNHPVAVRYPRGAGAGVVPHLALDALPF--GKG 505

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG+R+A+L +GT +   L A+  L++     TV + R+ KPLD  L+  +A +HE 
Sbjct: 506 EVRREGKRIAILVFGTLLYPALTAAESLDA-----TVVNMRWAKPLDVELLLKVAGTHEA 560

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EEG++ GG GS V++ L    +    ++   L LPDR+I+HG P   LA  GL  +
Sbjct: 561 IVTLEEGAVMGGAGSAVLEALQAANVQKPVLQ---LGLPDRFIEHGDPGKLLASIGLDAA 617

Query: 540 HIAATVFNILG 550
            IAA++    G
Sbjct: 618 GIAASITQRFG 628


>gi|318041518|ref|ZP_07973474.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CB0101]
          Length = 635

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/560 (45%), Positives = 361/560 (64%), Gaps = 26/560 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KR ES +D FG GH+STSISA LGMA+ RD +G     VAVIGDG++
Sbjct: 88  HTLRQKDGVAGYLKRCESSFDHFGAGHASTSISAALGMALARDQRGEDFKCVAVIGDGSL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L  + ++V+LNDN  +S+         PPVGALS+ L+R++ ++PL
Sbjct: 148 TGGMALEAINHAGHLPKTRLLVVLNDND-MSIS--------PPVGALSTHLNRMRHSKPL 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL---FEELGLYYIGPVDGHNV 177
           + L++ A+   K +     EL  ++      M   +   L   FEELG  Y+GPVDGH++
Sbjct: 199 QFLQDNAEEAIKHLPFLHGELPPELKNLKESMKRLAVPKLGAVFEELGFTYMGPVDGHDI 258

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA- 236
             ++ + ++    +  GPVL+HV T KG+GY YAE+    YH  + FD ATGK + SS  
Sbjct: 259 AGMIQVFQQAHAHE--GPVLVHVATTKGKGYAYAEEDQVGYHAQSAFDLATGKAYPSSKP 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +  SY+  F + L+   E D  VV I AAM  GTGL+L  +  P + FDVGIAEQHAVT 
Sbjct: 317 KPPSYSKVFGQTLVKLCEQDPRVVGITAAMATGTGLDLLEKARPHQYFDVGIAEQHAVTM 376

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+ACEGL+P CAIYS+F+QRAYDQ++HDV +Q LPV F MDRAG+VGADGPTH G +D
Sbjct: 377 AAGMACEGLRPICAIYSTFLQRAYDQLIHDVGIQNLPVTFVMDRAGIVGADGPTHQGQYD 436

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PL 415
           ++++ C+PN  VMAP DEAEL  M+ T     + P+  R PRG G G  L    +G  PL
Sbjct: 437 ISYLRCVPNFTVMAPKDEAELQRMMVTCLQ-HNGPTALRIPRGEGEGAAL--MEEGWEPL 493

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+G+G +L +G+ + ++ YG  V   +A + LL+  G+R  V +ARF +P+D ALI  +A
Sbjct: 494 EIGRGELLADGDDLLIVAYGAMVYPAMATAGLLQEQGVRAAVINARFLRPMDEALILPMA 553

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           +    ++T+EEG + GGFG+ VV+ L    +L   V    + +PD+ +DH +P DQ  QA
Sbjct: 554 RRIGRVVTMEEGCLAGGFGAAVVETLNDHDVL---VPVHRIGIPDQLVDHATP-DQSKQA 609

Query: 535 -GLTPSHIAATVFNILGQTR 553
            GLTP+ +A ++    G  R
Sbjct: 610 LGLTPAQMADSILKRFGSLR 629


>gi|260893253|ref|YP_003239350.1| deoxyxylulose-5-phosphate synthase [Ammonifex degensii KC4]
 gi|260865394|gb|ACX52500.1| deoxyxylulose-5-phosphate synthase [Ammonifex degensii KC4]
          Length = 629

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/565 (48%), Positives = 357/565 (63%), Gaps = 28/565 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  G+SGF  R ES YD FGTGH+STSISA LG+A  RDL G    VVAVIGDGA+T
Sbjct: 88  TLRQLGGVSGFPSREESPYDIFGTGHASTSISAALGLAKARDLAGDHYAVVAVIGDGALT 147

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A EA+N+AG+L +D+IV+LNDN ++S+           VGAL++ LSRL+S+   R 
Sbjct: 148 GGMALEALNHAGHLQTDLIVVLNDN-EMSISKN--------VGALANYLSRLRSDPAYRR 198

Query: 123 LREVAKGVTKQIGG---PMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           L+E  + +T ++ G    + +  +++    + ++       FEELG  Y+GPVDGH++  
Sbjct: 199 LQEEFESLTSRLPGFGPRLRDFLSRLKGSVKYLVVPG--MFFEELGFTYLGPVDGHHLPT 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ ILE  +  K  GPVL+HVVT KG+GY  AE+  D YHGV  F+P TG+ + SS  T 
Sbjct: 257 LLRILERARALK--GPVLVHVVTRKGKGYKPAEEDPDLYHGVGPFNPETGELYSSSLPT- 313

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            YT  F   L+  AE D  +VAI AAM  GTGL LF +RFP R FDVGIAEQHAVTFAAG
Sbjct: 314 -YTEIFGRTLVRLAEEDPRIVAITAAMPSGTGLKLFAQRFPHRFFDVGIAEQHAVTFAAG 372

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA  G +P  AIYS+F+QRAYDQ++HDV LQ+LPV FA+DRAG+VG DG TH G FD+ +
Sbjct: 373 LAVGGYRPVVAIYSTFLQRAYDQIIHDVCLQRLPVVFALDRAGIVGEDGATHQGLFDLAY 432

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  +P+MVVMAP+DE EL HM+ TA    + P   RYPRG G+GV L    +  PL +G+
Sbjct: 433 LRSIPHMVVMAPADENELQHMLKTALT-HEGPIALRYPRGTGLGVTLDADPR--PLPIGQ 489

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +L EG  V L+  G  V   L A+  L + G+   V +ARF KPLD  LI   AK   
Sbjct: 490 GVVLREGRDVTLIAIGNMVPRALKAAEELAAQGISAAVINARFVKPLDIELILRYAKRTR 549

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            ++T+EEG + GGFGS V + L   GL  G VK   L + D +++HG P +   + GL  
Sbjct: 550 WVVTIEEGILAGGFGSAVAECLTSHGL--GEVKITRLGIEDTFVEHGHPEELRKKYGLDV 607

Query: 539 SHIAATVFNILGQTREALEIMSFKS 563
             I   V     Q+R  L + S K+
Sbjct: 608 QGIVRAVL----QSRPLLRLTSRKT 628


>gi|339495742|ref|YP_004716035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           17588 = LMG 11199]
 gi|338803114|gb|AEJ06946.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           17588 = LMG 11199]
          Length = 632

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 349/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +R ESEYD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPPAPKKPTGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYPDRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGLKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + P  +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNASIEPALE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G +VALL +G  +   L     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRQGSKVALLVFGVQLPEALQVGEALDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+TVEE S+ GG GS V +FLA +G+L      RP++   LPD Y++H  P++ LA+ GL
Sbjct: 560 LVTVEENSVMGGAGSAVAEFLAAEGVL------RPILHLGLPDYYVEHAKPSEMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A V
Sbjct: 614 DAAGIEAAV 622


>gi|268592057|ref|ZP_06126278.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rettgeri DSM
           1131]
 gi|291312450|gb|EFE52903.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rettgeri DSM
           1131]
          Length = 621

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/550 (47%), Positives = 350/550 (63%), Gaps = 26/550 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ +GL  F  R ESEYD    GHSSTSISAGLGMA+  + + +    V VIGDGA+T
Sbjct: 97  TIRQKNGLHPFPWREESEYDILSVGHSSTSISAGLGMAIAAEKEKQNRKTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG    DM+VILNDN ++S+           VGAL++ L+ L S +    
Sbjct: 157 AGMAFEAMNHAGDAAPDMLVILNDN-EMSISEN--------VGALNNHLAHLLSGKLYTT 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  K +E+ +GM+     T+FEELG  YIGPVDGH+V  LV 
Sbjct: 208 LREGGKKVFSNMP-PIKELLKKTEEHIKGMVVPG--TMFEELGFNYIGPVDGHDVVALVQ 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP+T    KS     +++
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPISWHAVPKFDPSTFTLPKSKETGPTFS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L  EA+ D  ++AI  AM  G+G+  F + FP + FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCEEAKDDSKLMAITPAMREGSGMVRFSKEFPEQYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QR YDQV+HDV +QK+PV FA+DRAG+VGADG TH GSFD++F+ C
Sbjct: 383 GGYKPIVAIYSTFLQRGYDQVIHDVAIQKVPVMFAIDRAGIVGADGQTHQGSFDISFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+MAPSDE E   M+ T     D P   RYPRG G G EL P +   PL +GKG +
Sbjct: 443 IPTMVIMAPSDENECRQMLHTGYHYQDGPCAVRYPRGTGTGAELQPLS---PLPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
             +GE+VA+L +GT     L + AL+ +  L  TV D RF KPLD AL+  +A +H+VL+
Sbjct: 500 RRQGEKVAILCFGT-----LLSHALVAAEQLNATVVDMRFVKPLDEALVLEMANTHDVLV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           T+EE +I GG GS V +FL  +  +  T+    L LPD +I  G+  + +A+ GL  + I
Sbjct: 555 TLEENAIMGGAGSGVNEFLMHEKKIIPTLN---LGLPDYFISQGTQEELIAELGLDSTGI 611

Query: 542 AATVFNILGQ 551
             ++ N L +
Sbjct: 612 VNSINNYLAK 621


>gi|395651510|ref|ZP_10439360.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas
           extremaustralis 14-3 substr. 14-3b]
          Length = 631

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/546 (46%), Positives = 348/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G++ F +RSESEYD FG GHSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 102 MSTLRQKGGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P         A    
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG+
Sbjct: 328 YSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGAKPVVAIYSTFLQRAYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRGNG    +       P+E+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGNGPNAVIE--KDLAPIEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G + A L +G  +   L  +  +++     TV D RF KPLD AL+R +A  HE+
Sbjct: 505 IVRRQGSKTAFLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAARHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  +
Sbjct: 560 LVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEA 616

Query: 540 HIAATV 545
            I A+V
Sbjct: 617 GIEASV 622


>gi|302879473|ref|YP_003848037.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans
           ES-2]
 gi|302582262|gb|ADL56273.1| deoxyxylulose-5-phosphate synthase [Gallionella capsiferriformans
           ES-2]
          Length = 613

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/546 (47%), Positives = 347/546 (63%), Gaps = 27/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G++GF KR ES YD FGTGHSSTSISA LGMAV   L G     VA+IGDGA
Sbjct: 89  MSGLRMEGGIAGFPKREESPYDTFGTGHSSTSISAALGMAVAAQLSGSARRSVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G A+EA+NNAG ++++++VILNDN  +S+          PVGAL++ L++L S R  
Sbjct: 149 MTGGMAFEALNNAGAMNANLLVILNDN-DMSISR--------PVGALNNYLAKLMSGRFY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R  ++ V K +  P+ E A + +E+ +GM+     T+FEE G  YIGP+DGH+++ L
Sbjct: 200 AAMRRGSEKVLKGMP-PVLEFAKRAEEHVKGMVIPG--TMFEEFGFNYIGPIDGHDLNAL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  ++  +  GP  +HVVT+KG+GY  AE+    YHGV+KFD   G   K S    S
Sbjct: 257 IDTLSNIRQLE--GPQFLHVVTQKGKGYTLAEEDCLLYHGVSKFDRTNGIVPKPSG-NPS 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L   A  D  VV I  AM  G+G+  F  ++P R FDVGIAEQHA+TFAAGL
Sbjct: 314 YTQVFGQWLCDIAAEDARVVGITPAMCEGSGMGEFAEKYPQRYFDVGIAEQHALTFAAGL 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+G KP  AIYS+F+QRAYDQ++HD+ +QKLPV  A+DR GLVGADG TH GSFD++F+
Sbjct: 374 ACDGYKPVVAIYSTFLQRAYDQLIHDIAIQKLPVILAIDRGGLVGADGATHAGSFDLSFL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM VMAPSDE E   M+ TA  +D  P+  RYPRG G GV +    + +P  VGK 
Sbjct: 434 RCIPNMTVMAPSDENECRQMLYTAMTLDT-PTAVRYPRGVGPGVAVCNEMQALP--VGKA 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG RVA+L +G+     + A AL+    L  TV + RF KPLD  L+  +A +HE+
Sbjct: 491 EVRREGVRVAILAFGS-----MLAPALIAGEQLDATVVNMRFVKPLDAELLHRMASAHEL 545

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++TVEE ++ GG GS V + LA+ G+    V    L LPDR+ID G P   LA  GL  +
Sbjct: 546 VVTVEENTVQGGAGSAVAECLAEAGI---AVNLLHLGLPDRFIDQGDPVKMLADCGLDSA 602

Query: 540 HIAATV 545
            I   +
Sbjct: 603 GIIVAI 608


>gi|384085057|ref|ZP_09996232.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidithiobacillus
           thiooxidans ATCC 19377]
          Length = 624

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/541 (48%), Positives = 350/541 (64%), Gaps = 25/541 (4%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +R  DGLSGF KR ES YD FG GHSSTSISAGLGMAV   LK     VVA+IGDGAMTA
Sbjct: 92  LRMKDGLSGFLKRDESPYDSFGAGHSSTSISAGLGMAVAAKLKKNDREVVAIIGDGAMTA 151

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 123
           G AYEA+NN G LD++++V+LNDN ++S+         P VGA+S  L+R+ S R    +
Sbjct: 152 GMAYEALNNGGVLDANLLVVLNDN-EMSIS--------PNVGAVSQYLTRILSGRLYNTV 202

Query: 124 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 183
           R+ A G    +  P+ ELA K +E  +G+++    TLFEE+G  Y GP+DGH++D L+  
Sbjct: 203 RDGA-GQALSLVPPLRELAKKAEEGVKGLVTPG--TLFEEMGFNYFGPIDGHDLDALIPT 259

Query: 184 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 243
           LE +K  K  GP L+HV+T+KG+GY  AE+    YHGV  F+ + G+  K +    SYT 
Sbjct: 260 LENLKKIK--GPRLLHVMTKKGKGYGPAEEDPCGYHGVTPFNQSDGQMAKKAGGPPSYTK 317

Query: 244 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 303
            F + L  +   +  +VAI  AM  G+GL  F + +P R +DVGIAEQHAVTFAAG+AC+
Sbjct: 318 VFGDWLCDKGAAESSLVAITPAMREGSGLVRFEQLYPERYYDVGIAEQHAVTFAAGMACD 377

Query: 304 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 363
           G+ P  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADG TH G+FD+ +  C+
Sbjct: 378 GIHPVVAIYSTFLQRAYDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDMAYARCI 437

Query: 364 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL 423
           PN+VVMAP DE EL  M+ T  A    P+  RYPRG G+G+EL   N    + +GK  ++
Sbjct: 438 PNLVVMAPKDEQELRDMLNTGFAYPG-PALVRYPRGTGVGLELDK-NLERTVALGKAEVI 495

Query: 424 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 483
             G ++A+L +GT   + L A   L++     TV + RF KPLD  L++ L ++H+ L+T
Sbjct: 496 RSGNKLAILAFGTRAAAALQAGEALDA-----TVINMRFVKPLDQELLQELTQTHQALLT 550

Query: 484 VEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIA 542
           VEEG I GG GS V ++L   G +   V  R L LPD++I+ G     LA+ GL  S I 
Sbjct: 551 VEEGVIAGGAGSAVAEYLLNQGQI---VPMRILGLPDQFIEQGDANQWLAELGLDASGIT 607

Query: 543 A 543
           A
Sbjct: 608 A 608


>gi|426411714|ref|YP_007031813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. UW4]
 gi|426269931|gb|AFY22008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. UW4]
          Length = 632

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/566 (46%), Positives = 360/566 (63%), Gaps = 40/566 (7%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDP----ATGKQFKSSA 236
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P    AT  +  S  
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPATAPKKASGP 327

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +   Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT 
Sbjct: 328 K---YSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTL 384

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD
Sbjct: 385 AAGMACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFD 444

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           ++F+ C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E
Sbjct: 445 LSFLRCIPGMLVMTPSDENELRKML-TTGHLYEGPAAVRYPRGNGPNATIEKDLE--PIE 501

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKG +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A 
Sbjct: 502 IGKGVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAG 556

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           SHE+L+TVEE ++ GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ G
Sbjct: 557 SHELLVTVEENAVMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECG 613

Query: 536 LTPSHIAATVFNILGQTREALEIMSF 561
           L  + I A++       RE L++++ 
Sbjct: 614 LNEAGIEASI-------RERLQLLNI 632


>gi|434384302|ref|YP_007094913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chamaesiphon minutus PCC
           6605]
 gi|428015292|gb|AFY91386.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chamaesiphon minutus PCC
           6605]
          Length = 636

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/552 (46%), Positives = 351/552 (63%), Gaps = 23/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RDLKG     VAVIGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRGESKFDHFGAGHASTSISAALGMAIARDLKGENFKCVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+++AG+L  ++++V+LNDN+    P          VGA+   L++L+ + P
Sbjct: 147 LTGGMALEAIDHAGHLPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKLRVSPP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L +  +   K I   G  +    A+V E  + +       +FEELG  YIGPVDGHN
Sbjct: 198 IQFLSDNIEEQLKHIPFVGESISPELARVKEGMKRLAVPKVGAVFEELGFTYIGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L++  E     K  GPV++HV T KG+GY  AE   + YH  + F+ ATGK   +S 
Sbjct: 258 LEELISTFEGAH--KHAGPVIVHVATTKGKGYAIAESDREGYHAQSPFNLATGKSAPASK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  +Y+  FA+ LIA AE D  +VAI AAMG GTGL+ F  + P R  DVGIAEQHA+T
Sbjct: 316 PKPPTYSKVFADTLIALAENDPRIVAITAAMGTGTGLDKFQAKLPDRYVDVGIAEQHAIT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLA EG++P  AIYS+F+QRA+DQ+VHD  +Q LPV   +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLATEGMRPVAAIYSTFLQRAFDQIVHDACIQHLPVFLCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGIP 414
           D+ ++ C+PNMV+MAP DE EL  M+ T     D P   RYPRGNG GV L   G + +P
Sbjct: 436 DIAYLRCIPNMVLMAPKDEGELQQMLVTGINYTDGPIAMRYPRGNGYGVPLMDEGWEELP 495

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GK  IL EG+ V ++ YG+ V   L A+ LL  +G+  TV +ARF KPLD  L   L
Sbjct: 496 --IGKAEILREGDDVLMIAYGSMVHPTLQAAGLLSEHGISATVINARFAKPLDTELFAPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+S   ++TVEEG + GGFGS + + L     L+  V  + + +PD  ++H +P + L  
Sbjct: 554 ARSIGKVVTVEEGCLMGGFGSAIAESLMD---LNVVVPIKRIGVPDILVEHATPDESLGS 610

Query: 534 AGLTPSHIAATV 545
            GLT S IA TV
Sbjct: 611 LGLTSSQIAETV 622


>gi|434407504|ref|YP_007150389.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cylindrospermum stagnale
           PCC 7417]
 gi|428261759|gb|AFZ27709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cylindrospermum stagnale
           PCC 7417]
          Length = 635

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/561 (45%), Positives = 360/561 (64%), Gaps = 25/561 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ +G++G+ KR E+++D FG GH+STSISA LGMA+ RDLKG K   VAVIGDGA
Sbjct: 87  FHTLRQKNGVAGYLKRCENKFDHFGAGHASTSISAALGMALARDLKGEKFKAVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN ++S+         P VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTSLLVVLNDN-EMSIS--------PNVGAIPRYLNKMRLSAP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ +++  +G  KQI      L+ +++    GM    +   G+ +FEELG  Y+GPVDGH
Sbjct: 198 VQFIKDNFEGQLKQIPFVGESLSPELERIKEGMKRLAVPKVGA-VFEELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+A  ++    +  GPVL+HVVT KG+GY  AE     YH    F+ ATGK   S+
Sbjct: 257 NLEELIATFQQAH--QMPGPVLVHVVTTKGKGYEIAELDQVGYHAQNPFNVATGKAIPSN 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  +Y   F+  L+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAV
Sbjct: 315 KPKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLA EG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAAGLATEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ C+PN+VVMAP DEAEL  MV T     D P   R+PRGNG GV  P   +G  
Sbjct: 435 YDIAYLRCIPNIVVMAPKDEAELQRMVVTGVNHTDGPIAMRFPRGNGYGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PLE+GKG IL +G+ V +LGYG+ V + + A+ +L  +G+  TV +ARF KPLD  LI  
Sbjct: 493 PLEIGKGEILRQGDDVLILGYGSMVYTAMQAAEILSEHGIEATVINARFVKPLDTDLILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LAK    ++T+EEG + GGFGS V + L    +L   V  + + +PD  +DH +P +  A
Sbjct: 553 LAKQIGRVVTLEEGCLMGGFGSAVAEALMDADIL---VPVKRIGVPDILVDHATPDESYA 609

Query: 533 QAGLTPSHIAATVFNILGQTR 553
             GLT   IA  V     Q +
Sbjct: 610 ALGLTSRQIAEKVLQTYFQKQ 630


>gi|300690861|ref|YP_003751856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia solanacearum
           PSI07]
 gi|299077921|emb|CBJ50560.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia solanacearum PSI07]
          Length = 636

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/556 (47%), Positives = 356/556 (64%), Gaps = 36/556 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMALGAKTQGENRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y +  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPAAR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHA T
Sbjct: 316 PSKISYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAAT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VMAP+DE E   +++TA A  D P+  RYPRG G GV +    +  PL
Sbjct: 436 DMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDCPTAVRYPRGAGPGVAVQATLE--PL 492

Query: 416 EVGKGRI-----LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGK  +        G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A 
Sbjct: 493 PVGKAEVRRVSTAPAGQRVAILAFGSMVAPATAAAERLDA-----TVVNMRFVKPLDVAC 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           +  +A+SH+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR++DHG  A 
Sbjct: 548 VLEMARSHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFVDHGDHAA 604

Query: 530 QLAQAGLTPSHIAATV 545
            LAQ GL  + I A+V
Sbjct: 605 LLAQCGLDANGILASV 620


>gi|91776485|ref|YP_546241.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
           flagellatus KT]
 gi|118595589|sp|Q1GZD7.1|DXS_METFK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|91710472|gb|ABE50400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacillus
           flagellatus KT]
          Length = 614

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/546 (46%), Positives = 349/546 (63%), Gaps = 27/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R+  G++GF +R ES YD FGTGHSSTSISA LGMAV     G   + +AVIGDGA
Sbjct: 89  MGNLRRPGGIAGFPRRDESIYDTFGTGHSSTSISAALGMAVAAQKTGSDRHSIAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG +D++++VILNDN     P          VGAL++ L++L S    
Sbjct: 149 MTAGMAFEALNNAGAMDANILVILNDNDMSISPN---------VGALTNYLAKLLSGPLY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R   + V   +  P+ E A + +E+ +GM++    TLFEE G  YIGP+DGH++D L
Sbjct: 200 TTVRRSGEKVLGVVP-PVREFAKRAEEHVKGMVTPG--TLFEEFGFNYIGPIDGHDIDVL 256

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L  ++  K  GP  +H+ T+KG GY  AE    K+HGV KFDP+ G     + + ++
Sbjct: 257 ITTLRNIRELK--GPQFLHIATQKGHGYQPAEDNPGKFHGVGKFDPSNGCSIAQAGK-KT 313

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L+  A  D+ +V I  AM  G+GLN F  +FP R FDVGIAEQHA+TFAAG+
Sbjct: 314 YTQVFSDWLVDMAARDERLVGITPAMCDGSGLNAFAEQFPDRFFDVGIAEQHALTFAAGM 373

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKP  AIYS+F+QRAYDQ +HD+ LQ LPV FA+DRAGLVGADGPTH GSFD++++
Sbjct: 374 ACDGLKPVVAIYSTFLQRAYDQFIHDIALQNLPVMFAIDRAGLVGADGPTHAGSFDLSYL 433

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+++MAPSDE E   M+ T A + D PS  RYPRG G G  +    + +P  +GKG
Sbjct: 434 RCIPNIIIMAPSDENECRQMLYT-AYLHDGPSAVRYPRGGGPGATITRDMQLLP--IGKG 490

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G  VA+L +G+ +   L A+  L++     TVA+ RF KPLD  LI  LA SH +
Sbjct: 491 ELRRQGSWVAILAFGSMLAPALEAAETLDA-----TVANMRFVKPLDANLINQLASSHTL 545

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++TVEE ++ GG G+ V++ +      D       L LPD +I+HG     LA+ GL  +
Sbjct: 546 IVTVEENAVMGGAGAAVMECMQA---ADIHTPVLCLGLPDMFIEHGVHETMLAECGLNAA 602

Query: 540 HIAATV 545
            I A +
Sbjct: 603 GIIAAI 608


>gi|300703493|ref|YP_003745095.1| 1-deoxy-d-xylulose 5-phosphate synthase [Ralstonia solanacearum
           CFBP2957]
 gi|299071156|emb|CBJ42470.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia solanacearum CFBP2957]
          Length = 637

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/555 (47%), Positives = 356/555 (64%), Gaps = 33/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMAQGAKTRGESRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y +  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYKNLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVA-KFDPATGKQFKS 234
             LV  L+ ++     G  P  +HVVT+KG+GY  AE    KYH  + +FDPA G    +
Sbjct: 256 GSLVPTLQNIRQRALEGGGPQFLHVVTKKGQGYKLAEADPVKYHAASGRFDPAVGFAKPA 315

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           +    SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAV
Sbjct: 316 TPPKTSYTQLFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAV 375

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G+
Sbjct: 376 TFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGA 435

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D+ ++ C+PNM+VMAP+DE E   +++TA A  D P+  RYPRG G GV + P    +P
Sbjct: 436 YDMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDCPTAVRYPRGAGPGVAVQPTLDPLP 494

Query: 415 L---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALI 471
           +   EV +      G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A +
Sbjct: 495 VGKAEVRRASTAPAGQRVAILAFGSMVAPATAAAERLDA-----TVVNMRFVKPLDVACV 549

Query: 472 RSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQ 530
             +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR+IDHG  A  
Sbjct: 550 LEMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFIDHGDHAAL 606

Query: 531 LAQAGLTPSHIAATV 545
           LA  GL  + I A++
Sbjct: 607 LALCGLDANGILASI 621


>gi|428775720|ref|YP_007167507.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halothece sp. PCC 7418]
 gi|428689999|gb|AFZ43293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Halothece sp. PCC 7418]
          Length = 638

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/559 (45%), Positives = 353/559 (63%), Gaps = 25/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES +D FG GH+STSISAGLGMA+ RD KG +  VV+VIGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRCESPFDHFGAGHASTSISAGLGMALARDAKGEEFKVVSVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN ++S+         P VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLMVVLNDN-EMSIS--------PNVGAISRYLNKVRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K +      L  +++    GM    +   G+ + EELG  Y GP+DGH
Sbjct: 198 MQFLSDNLEEQFKHLPFFGESLTPEMERVKEGMKRLAVPKVGAVI-EELGFKYFGPIDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKS 234
           N+ +L+    + +  + TGPVL+HV T KG+GY  AEK    YH  + F+ ATGK Q  S
Sbjct: 257 NLSELIHTFRQAE--QVTGPVLVHVATTKGKGYAIAEKDQVGYHAQSAFNIATGKAQPSS 314

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +   Y   FA  L   AE +  ++ I AAM  GTGL+   ++ P +  DVGIAEQHAV
Sbjct: 315 KPKPPKYCKVFAHTLTKLAESNPKIIGITAAMATGTGLDKLQQKLPDQYVDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ CLPNMVVMAP DEAEL  M  T     D     RYPRGNGIGV  P   +G  
Sbjct: 435 YDIAYLRCLPNMVVMAPKDEAELQRMTVTGINYTDGAIAMRYPRGNGIGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P+E+GKG IL  G+ + LLGYGT V + + A+ +L  +G+  TV ++RF KPLD  LI  
Sbjct: 493 PIEIGKGEILRNGDDILLLGYGTMVSTAMQAAEILSEHGIEATVVNSRFVKPLDTDLIFP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    + T+EEG + GGFGS V +    + +L   V  +   +PD+ +DH  P + +A
Sbjct: 553 LAQKIGRVATLEEGCLMGGFGSAVTEAFMDNNIL---VPVKRFGVPDQLVDHAKPEEAIA 609

Query: 533 QAGLTPSHIAATVFNILGQ 551
             GL  S IA  V +   Q
Sbjct: 610 DLGLNSSQIAEQVLSTFFQ 628


>gi|431925835|ref|YP_007238869.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri RCH2]
 gi|431824122|gb|AGA85239.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri RCH2]
          Length = 632

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/549 (46%), Positives = 350/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +GL+ F +RSESEYD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MGTLRQKEGLAAFPRRSESEYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPVKPKKPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L A A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCAMAAADPRLTGITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + PG +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNAAIEPGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G ++ALL +G  +   +     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRQGSKIALLVFGVQLPEAMQVGEALDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+TVEE SI GG GS V +FL  + +L      +PL+   LPD Y++H  P++ LA+ GL
Sbjct: 560 LVTVEENSIMGGAGSAVAEFLTGESIL------KPLLHLGLPDYYVEHAKPSEMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A V
Sbjct: 614 DAAGIEAAV 622


>gi|298492661|ref|YP_003722838.1| deoxyxylulose-5-phosphate synthase ['Nostoc azollae' 0708]
 gi|298234579|gb|ADI65715.1| deoxyxylulose-5-phosphate synthase ['Nostoc azollae' 0708]
          Length = 635

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/554 (46%), Positives = 353/554 (63%), Gaps = 25/554 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KR E+++D FG GH+STSISA LGMA+ RDLKG K   VAVIGDGA+
Sbjct: 88  HTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAALGMALARDLKGEKFKSVAVIGDGAL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L  ++++V+LNDN+    P          VGA+   L++++ + P+
Sbjct: 148 TGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKMRLSPPV 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHN 176
           + L +  +   K I      ++ +++    GM    +   G+ +FEELG  Y+GP+DGHN
Sbjct: 199 QFLSDGIEEQLKHIPFVGESISPELERIKEGMKRLAVPKVGA-VFEELGFTYMGPMDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L+A  ++    K TGPVL+HVVT KG+GY  AEK    YH    F+ ATGK   SS 
Sbjct: 258 LEELIATFQQAH--KITGPVLVHVVTTKGKGYELAEKDQVGYHAQNPFNLATGKAIPSSK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  +Y   F+  L+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPAYAKVFSHTLVKLAEQNPKIVGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLA EG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DR+G+VGADGPTH G +
Sbjct: 376 LAAGLAAEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRSGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D+ +M C+PNMVVMAP DEAEL  MV T       P   R+PRGNG GV  P   +G  P
Sbjct: 436 DIAYMRCIPNMVVMAPKDEAELQRMVVTGINHTTSPISMRFPRGNGHGV--PLMEEGWEP 493

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+GKG IL +G+ V +LGYGT V   + A+ +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 494 LEIGKGEILRQGDDVLILGYGTMVYPSMQAAEILSEHGIEATVINARFVKPLDTELIVPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           AK    ++++EEG + GGFGS V + L    +L   V  + + +PD  +DH +P +  A 
Sbjct: 554 AKQIGRVVSLEEGCLMGGFGSAVAEALMDANVL---VPVKRIGVPDILVDHATPDESFAV 610

Query: 534 AGLTPSHIAATVFN 547
            GL+   I  TV  
Sbjct: 611 LGLSSRQIVETVLQ 624


>gi|417842707|ref|ZP_12488788.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21127]
 gi|341951266|gb|EGT77843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21127]
          Length = 625

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 354/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG + +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 IYSTLRDGSKKILDKVP-PVKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K +++ 
Sbjct: 263 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKHNSKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADGPTH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN IGVEL P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAIGVELTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ EG+++A+L +GT + S L A+  L +     TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIREGQKIAILNFGTLLPSALEAAEKLNA-----TVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + L   GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALKDLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 SKGIEDKILNFIAK 621


>gi|392419664|ref|YP_006456268.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri CCUG
           29243]
 gi|390981852|gb|AFM31845.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri CCUG
           29243]
          Length = 632

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/546 (46%), Positives = 346/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +RSESEYD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MATLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPVKPKKPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + PG +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNATIEPGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG +VALL +G  +   L     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRREGSKVALLVFGVQLPEALQVGETLDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE SI  G GS V +FL  + +L   +    L LPD Y++H  P++ LA+ GL  +
Sbjct: 560 LVTIEENSIMAGAGSAVAEFLTGESILKPMLH---LGLPDYYVEHAKPSEMLAECGLDAA 616

Query: 540 HIAATV 545
            I A V
Sbjct: 617 GIEAAV 622


>gi|398925618|ref|ZP_10661992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM48]
 gi|398171979|gb|EJM59867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM48]
          Length = 632

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/563 (46%), Positives = 355/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYEGPAAVRYPRGNGPNANIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVIRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A++       RE L+++S 
Sbjct: 617 AGIEASI-------RERLQLLSI 632


>gi|148242489|ref|YP_001227646.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. RCC307]
 gi|166201543|sp|A5GTT4.1|DXS_SYNR3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|147850799|emb|CAK28293.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. RCC307]
          Length = 640

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/558 (45%), Positives = 358/558 (64%), Gaps = 26/558 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+R+ DG++G+ KRSES +D FG GH+STSISA LGMA+ RD +G+ +  VAVIGDGA
Sbjct: 87  FHTLRKKDGVAGYLKRSESSFDHFGAGHASTSISAALGMAIARDRQGQNHKCVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN  +S+         PPVGALS+ L+R++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTRLLVVLNDN-DMSIS--------PPVGALSNHLNRMRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L   A+   + +     ++ A+++    GM    +   G+ +FEELG  Y+GPVDGH
Sbjct: 198 MQFLTGSAEEAVRHLPFMQGQVPAELNRIKEGMKRLAVPKVGA-VFEELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           ++  LV   +E    ++ GPVL+HV T KG+GYPYAE     YH  + FD  TGK F + 
Sbjct: 257 DIGALVRTFQEAH--RSEGPVLVHVATTKGKGYPYAEADQVGYHAQSAFDLTTGKSFPAK 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  SY+  F + L+   E D  +V I AAM  GTGL+L  +  P +  DVGIAEQHAV
Sbjct: 315 KPKPPSYSKVFGQTLVKLCEQDSRIVGITAAMATGTGLDLLQKAVPDQYVDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAG+AC+GLKP  AIYS+F+QRAYDQ++HDV +QKLPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAAGMACDGLKPVVAIYSTFLQRAYDQLIHDVGIQKLPVTFVLDRAGIVGADGPTHQGQ 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D++++ C+PN  VMAP DEAEL  M+ T     + P   R PRG+G GV  P    G  
Sbjct: 435 YDISYLRCVPNFTVMAPKDEAELQRMLVTGLR-HNGPIALRIPRGSGEGV--PCLEDGWE 491

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PLE+G+G +L EG+ + ++ YG  V   +A + LL+  G+R TV +ARF +PLD AL+  
Sbjct: 492 PLEIGRGELLAEGDDLLIVAYGAMVAPAMATAGLLQEQGIRATVVNARFLRPLDEALLVP 551

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LAK    ++T+EEG + GGFG+ V++ L    +L   V    L +PD+ +DH SP +   
Sbjct: 552 LAKRIGRVVTMEEGCLAGGFGAAVMEALHDRDVL---VPMLRLGIPDQLVDHASPDESKQ 608

Query: 533 QAGLTPSHIAATVFNILG 550
             GLTP  +A  +    G
Sbjct: 609 ALGLTPPQMADRICERFG 626


>gi|421503887|ref|ZP_15950832.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           DLHK]
 gi|400345391|gb|EJO93756.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           DLHK]
          Length = 631

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/557 (46%), Positives = 351/557 (63%), Gaps = 32/557 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   LKG K   VAVIGDGA
Sbjct: 102 MGSLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHATDVNANMLVILNDN-DMSISKN--------VGGLSNYLAKIISSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A KV+E+A+GM+     TLFEELG  Y+GP+DGH++  L
Sbjct: 213 ASMREGSKKILSRLPGAW-EIARKVEEHAKGMLVPG--TLFEELGWNYVGPIDGHDLPIL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     YH + K +P T            
Sbjct: 270 LATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPIGYHAITKLEPVTPSAVPRKPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D+ +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADQRLVGITPAMKEGSDLVAFAERFPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+G+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACDGVKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDISYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M+ T       P+  RYPRG+G    L  G +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENELRRMLTTGYLFAG-PAAVRYPRGSGPNAPLDAGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G+  ALL +G  +     A AL     L  TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRQGKGAALLVFGVQL-----AEALQVGEALNATVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE ++ GG GS V +FLA   ++      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAVMGGAGSAVSEFLAAQNII------KPLLHLGLPDYYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATVFNILGQTR 553
             + I   V   L Q R
Sbjct: 614 DQAGIERAVRERLDQLR 630


>gi|237755740|ref|ZP_04584346.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692104|gb|EEP61106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 631

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/529 (46%), Positives = 337/529 (63%), Gaps = 24/529 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
             T+RQ  G+SGF+K  ES+YD FGTGHSSTSISA LG  VG+DLK      +AVIGDGA
Sbjct: 91  FRTLRQYKGISGFSKIKESKYDHFGTGHSSTSISAALGFRVGKDLKKDDAYTIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAGQA+E +NNAG+LD S  IVILNDN Q+S+         P VGA+ +  +++ + + 
Sbjct: 151 MTAGQAFEGLNNAGWLDPSRFIVILNDN-QMSIS--------PNVGAIYTYFNKIITKQV 201

Query: 120 LRELREVAKGVTKQIGGPMH-ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++ R+  K    +I G    ++  K++EY +G+ +     +FEELG  Y+GP+DGH++ 
Sbjct: 202 FQKPRQKLKEAINKIFGEQGVKIFRKIEEYTKGLFAPG--LIFEELGFTYVGPIDGHSLF 259

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           DL   LE +K  +  GP+L+HV+T+KG+GY YAE+    +HGV+ FD  +G  F  S+  
Sbjct: 260 DLEQTLENIKQMR--GPILLHVITQKGKGYKYAEENPTTFHGVSPFDKISG-VFNKSSNL 316

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F +AL+  AE D  VVAI  AM  G+GL  F  +FP R FDVGIAEQHA TFA 
Sbjct: 317 PTYSKVFGDALVEIAEKDDKVVAITPAMREGSGLVKFAEKFPDRFFDVGIAEQHAATFAG 376

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
            LA EG KP  A YS+F+QRAYDQV+HD+ LQ+LPV FA+DR GLVG DGPTH G FD+ 
Sbjct: 377 ALALEGFKPVAAYYSTFLQRAYDQVIHDIALQELPVFFAIDRGGLVGDDGPTHHGVFDIA 436

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  +PNM++ +P DE EL  ++ T      RP   RYPRG G GV++   N    +E+G
Sbjct: 437 FLRPIPNMIIASPKDEQELRDLLYTGLN-SKRPFALRYPRGTGYGVKMEGFN---TIEIG 492

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              IL EG  +A+L  G  V   L     L   G   TV +ARF KP+D  L+  L K+H
Sbjct: 493 SWEILDEGRDIAILAVGKYVYRALEVKKQLRLKGFNPTVVNARFIKPMDENLLNKLLKTH 552

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGS 526
           E +IT E+G + GGFGS V +F+  +G  +  +++    +PD++I+HG 
Sbjct: 553 EFVITAEDGVLNGGFGSAVAEFVIDNGYSNKVLRFG---IPDKFIEHGK 598


>gi|407940295|ref|YP_006855936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
 gi|407898089|gb|AFU47298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. KKS102]
          Length = 631

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/552 (46%), Positives = 354/552 (64%), Gaps = 30/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF +R+ES YD FGT HSSTSISA LGMA+    KG   + VA+IGDGA
Sbjct: 93  MHTLRQLGGISGFPQRAESVYDTFGTAHSSTSISAALGMALAAKRKGDNRHAVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG  D +++V+LNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MSAGMAFEALNNAGVADCNLLVVLNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V + +  P+ E A + ++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AAAKNVGKTVLRPVP-PLLEFAKRFEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDP+ G    ++   Q+
Sbjct: 261 IPTLENIKSLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPATPPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D  +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++++A    D P   RYPRG+G GV       G+P   G+ 
Sbjct: 439 RCIPNMSMACPADERECRQLLSSAFE-QDHPVAVRYPRGSGAGVAPLAALDGLPFGKGEI 497

Query: 421 RILIEGE------RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           R   +GE      R+A+L +GT +   L     L++     TV + R+ KP+D AL+R +
Sbjct: 498 RRERKGEADGKAPRIAILAFGTLLYPALEVGEALDA-----TVVNMRWAKPIDEALLRKV 552

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+ H+ L+TVEEG+I GG GS V + L   G++   ++   L LPD +I+HG PA  LA 
Sbjct: 553 AERHDALVTVEEGAIMGGAGSAVTEALNAMGIVRPVLQ---LGLPDVFIEHGDPAKLLAL 609

Query: 534 AGLTPSHIAATV 545
            GL  + I A++
Sbjct: 610 QGLDAAGIRASI 621


>gi|241765610|ref|ZP_04763566.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN]
 gi|241364578|gb|EER59638.1| deoxyxylulose-5-phosphate synthase [Acidovorax delafieldii 2AN]
          Length = 630

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 267/544 (49%), Positives = 352/544 (64%), Gaps = 33/544 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +R+ES YD FGT HSSTSISA LGMA+    KG + +VVA+IGDGA
Sbjct: 93  MSTLRQLGGISGFPQRTESAYDTFGTAHSSTSISAALGMALAAKRKGEERHVVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNAGVADANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + V K V K    P+ ELA ++++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AAAKNVGKSVLKN-APPLLELAKRLEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++A  Q+
Sbjct: 261 IPTLENIKDLK--GPQFLHVVTKKGQGYKLAEVDPVAYHGPGKFDPAVGLVKSTAAPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   AE D  +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGQWLCDMAEQDDRLVGITPAMREGSGMVEFHKRFPDRYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRGYDQMIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   +++TA A  D P   RYPRG+G GV    G   +P   GKG
Sbjct: 439 RCIPNMSMACPADERECRQLLSTAFA-QDHPVAVRYPRGSGAGVAPLRGLDSLPF--GKG 495

Query: 421 RILIE-------GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
            I  E       G R+A+L +GT     L   AL  +  L  TV + R+ KPLD  L+  
Sbjct: 496 EIRRERKGDGKAGPRIAILAFGT-----LLYPALEAAEALDATVVNMRWAKPLDVELLLE 550

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           +A SH  L+T+EEG+I GG GS V++ LA   +   T+    L LPD +I+HG PA  LA
Sbjct: 551 VAASHHALVTLEEGAIMGGAGSAVMEALAAAQV---TMPVLQLGLPDVFIEHGDPARLLA 607

Query: 533 QAGL 536
             GL
Sbjct: 608 LQGL 611


>gi|121593454|ref|YP_985350.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42]
 gi|166198592|sp|A1W4U9.1|DXS_ACISJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|120605534|gb|ABM41274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. JS42]
          Length = 629

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/554 (47%), Positives = 357/554 (64%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GLSGF +R+ESEYD FGT HSSTSISA LGMA+    +G +   VA+IGDGA
Sbjct: 93  MPSLRQLGGLSGFPQRAESEYDTFGTAHSSTSISAALGMALAAKQRGDERRCVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+NNAG  D++++VILNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 153 MTAGMAFEALNNAGVADANLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + R++ K V K    P+ ELA ++++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 204 AKARDMGKSVLKN-APPLLELAKRLEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE ++  K  GP  +HVVT+KG+GY  AE     YHG  KFDP  G    ++   Q+
Sbjct: 261 IPTLENIRGLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPRVGLVKPATPPKQT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A+ DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 319 FTQVFGQWLCDMADKDKRLVGITPAMREGSGMVEFHQRFPDRYYDVGIAEQHAVTFAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 379 ACEGVKPVVAIYSTFLQRAYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIAFV 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P+M +  P+DE E   ++ TA    D P   RYPRG G+GV   P  +G+P   GKG
Sbjct: 439 RCIPHMSMACPADERECRQLLTTAYE-QDHPVAVRYPRGAGVGVAPLPDLEGLPF--GKG 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G+R+A+L +GT     L   AL  +  L  TV + R+ KPLD  L+  +A  H+ 
Sbjct: 496 EVRRTGQRIAILAFGT-----LLYPALQAAQALDATVVNMRWAKPLDTQLLLQVAAEHDA 550

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+TVEEG I GG GS V + LA  GL       RPL+   LPD +I+HG PA  LA  GL
Sbjct: 551 LVTVEEGCIMGGAGSAVAEALAAAGL------QRPLLQLGLPDVFIEHGDPAKLLALQGL 604

Query: 537 TPSHIAATVFNILG 550
             + +  ++    G
Sbjct: 605 DAAGMQRSITERFG 618


>gi|389681780|ref|ZP_10173124.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           O6]
 gi|388554315|gb|EIM17564.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           O6]
          Length = 632

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/547 (47%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K DP  +       A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLDPLDSPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P MVVM PSDE EL  M++T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMVVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNTTIEKDLQ--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +     A AL  ++ L  TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQL-----AEALKVADKLDATVVDMRFVKPLDEALVREIAASHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLAREAILKPILH---LGLPDLYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I A V
Sbjct: 617 AGIEAAV 623


>gi|422010054|ref|ZP_16357036.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rettgeri
           Dmel1]
 gi|414092227|gb|EKT53906.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rettgeri
           Dmel1]
          Length = 621

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 262/550 (47%), Positives = 350/550 (63%), Gaps = 26/550 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ +GL  F  R ESEYD    GHSSTSISAGLGMA+  + + +    V VIGDGA+T
Sbjct: 97  TIRQKNGLHPFPWREESEYDILSVGHSSTSISAGLGMAIAAEKEQQNRKTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG    DM+VILNDN ++S+           VGAL++ L+ L S +    
Sbjct: 157 AGMAFEAMNHAGDAAPDMLVILNDN-EMSISEN--------VGALNNHLAHLLSGKLYTT 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  K +E+ +GM+     T+FEELG  YIGPVDGH+V  LV 
Sbjct: 208 LREGGKKVFSNMP-PIKELLKKTEEHIKGMVVPG--TMFEELGFNYIGPVDGHDVVALVQ 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP+T    KS     +++
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPISWHAVPKFDPSTFTLPKSKETGPTFS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L  EA+ D  ++AI  AM  G+G+  F + FP + FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCEEAKDDGKLMAITPAMREGSGMVRFSKEFPDQYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QR YDQV+HDV +QK+PV FA+DRAG+VGADG TH GSFD++F+ C
Sbjct: 383 GGYKPIVAIYSTFLQRGYDQVIHDVAIQKVPVMFAIDRAGIVGADGQTHQGSFDISFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+MAPSDE E   M+ T     D P   RYPRG G G EL P +   PL +GKG +
Sbjct: 443 IPTMVIMAPSDENECRQMLHTGYHYQDGPCAVRYPRGTGTGAELQPLS---PLPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
             +GE+VA+L +GT     L + AL+ +  L  TV D RF KPLD ALI  +A +H+VL+
Sbjct: 500 RRKGEKVAILCFGT-----LLSHALVAAEQLNATVVDMRFVKPLDEALILEMANTHDVLV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           T+EE +I GG GS V +FL  +  +  T+    L LPD +I  G+  + +A+ GL  + I
Sbjct: 555 TLEENAIMGGAGSGVNEFLMHEKKIIPTLN---LGLPDYFISQGTQEELIAELGLDSTGI 611

Query: 542 AATVFNILGQ 551
             ++ N L +
Sbjct: 612 VNSINNYLAK 621


>gi|344167297|emb|CCA79505.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [blood disease bacterium R229]
          Length = 636

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 265/556 (47%), Positives = 355/556 (63%), Gaps = 36/556 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMALGAKTQGENRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y +  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPAAR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHA T
Sbjct: 316 PSKISYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAAT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM P+DE E   +++TA A  D P+  RYPRG G GV +    +  PL
Sbjct: 436 DMAYLRCIPNMMVMVPADENECRQLLSTAFA-QDCPTAVRYPRGAGPGVAVQATLE--PL 492

Query: 416 EVGKGRI-----LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGK  +        G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A 
Sbjct: 493 PVGKAEVRRVSTAPAGQRVAILAFGSMVAPATAAAERLDA-----TVVNMRFVKPLDAAC 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           +  +A+SH+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR++DHG  A 
Sbjct: 548 VLEMARSHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFVDHGDHAA 604

Query: 530 QLAQAGLTPSHIAATV 545
            LAQ GL  + I A+V
Sbjct: 605 LLAQCGLDANGILASV 620


>gi|330505138|ref|YP_004382007.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           NK-01]
 gi|328919424|gb|AEB60255.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina
           NK-01]
          Length = 631

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/546 (47%), Positives = 345/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   LKG K   VAVIGDGA
Sbjct: 102 MGTLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHATDVGANMLVILNDN-DMSISKN--------VGGLSNYLAKIISSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A KV+E+A+GM+     TLFEELG  Y+GP+DGH++  L
Sbjct: 213 ASMREGSKKILSRLPGAW-EIARKVEEHAKGMLVPG--TLFEELGWNYVGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     YH + K +P T            
Sbjct: 270 LATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPIGYHAITKLEPVTPVAAPKKPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADNRLVGITPAMKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGAKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M+ T    D  P+  RYPRG+G    L  G +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENELRRMLTTGHLFDG-PAAVRYPRGSGPNAPLDAGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G+ VALL +G  +   L     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRQGKGVALLAFGVQLAEALRVGETLDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE SI GG GS V +F A +   +  V    L LPD Y++H  P+  LA+ GL  +
Sbjct: 560 LVTLEENSIMGGAGSAVSEFFAAE---NRQVPMLHLGLPDYYVEHAKPSQMLAECGLDEA 616

Query: 540 HIAATV 545
            I A V
Sbjct: 617 GIEAAV 622


>gi|342904303|ref|ZP_08726104.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21621]
 gi|341953543|gb|EGT80047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21621]
          Length = 643

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 353/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 113 MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVTAERENAGRK--TVCVIGD 170

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG + +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 171 GAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 221

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 222 IYSTLRDGSKKILDKVP-PVKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 280

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K + + 
Sbjct: 281 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKHNTKP 338

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 339 -TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFAT 397

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADGPTH G+FD++
Sbjct: 398 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLS 457

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN IGVEL P      L +G
Sbjct: 458 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAIGVELTPLEM---LPIG 513

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ EG+++A+L +GT + S L A+  L +     TV D RF KP+D  +I  LA++H
Sbjct: 514 KSRLIREGQKIAILNFGTLLPSALEAAEKLNA-----TVVDMRFVKPIDIEMINVLAQTH 568

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + L   GL 
Sbjct: 569 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALKDLGLD 625

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 626 SKGIEEKILNFIAK 639


>gi|187929505|ref|YP_001899992.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12J]
 gi|309781718|ref|ZP_07676451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA]
 gi|404396620|ref|ZP_10988414.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_2_56FAA]
 gi|229836074|sp|B2U930.1|DXS_RALPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|187726395|gb|ACD27560.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12J]
 gi|308919359|gb|EFP65023.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_7_47FAA]
 gi|348610583|gb|EGY60271.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia sp. 5_2_56FAA]
          Length = 636

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/554 (47%), Positives = 353/554 (63%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G   KG     +AVIGDGA
Sbjct: 90  MGSLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMALGAKTKGEDRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+ +GM   +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHTKGMFVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +    
Sbjct: 256 ESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPSGR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               +YT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PAKVTYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM P+DE E   +++TA A  D P+  RYPRG G GV + P  + +P+
Sbjct: 436 DIAYLRCIPNMMVMTPADENECRQLLSTAFA-QDCPTAVRYPRGAGTGVTVQPTLEPLPV 494

Query: 416 ---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +      G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A + 
Sbjct: 495 GKAEVRRTSTAPAGQRVAILAFGSMVAPASAAAERLDA-----TVVNMRFVKPLDVACVL 549

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            +A++H+ ++T EEG + GG GS  ++ LA  G+    ++   L LPDR++DHG  A  L
Sbjct: 550 EMARTHDFVVTAEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFVDHGDHAALL 606

Query: 532 AQAGLTPSHIAATV 545
           AQ GL  + I A++
Sbjct: 607 AQCGLDANGILASI 620


>gi|398803632|ref|ZP_10562650.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. CF318]
 gi|398095885|gb|EJL86216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Polaromonas sp. CF318]
          Length = 635

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 266/549 (48%), Positives = 347/549 (63%), Gaps = 27/549 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GLSGF +R ESEYD FGT HSSTSISA LGMA+    KG   + VA+IGDGA
Sbjct: 89  MGSLRQFGGLSGFPRRDESEYDTFGTAHSSTSISAALGMALAAQQKGEDRHAVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EA+NNAG  D   ++V+LNDN  +S+         PPVGAL+  L++L S R 
Sbjct: 149 MSAGMAFEALNNAGVHDHCKLLVVLNDN-DMSIS--------PPVGALNRYLAQLMSGRF 199

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V + +  P+ ELA +++ +A+GM+  +  TLFE  G  YIGP+DGH+++ 
Sbjct: 200 YASAKHVGKQVLR-VAPPLLELAKRLEAHAKGMVVPA--TLFENFGFNYIGPIDGHDLES 256

Query: 180 LVAILEEVKNT--KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
           LV  LE +K+      GP  +HVVT+KG+GY  AE     YHG  KFDPA G Q  S+  
Sbjct: 257 LVPTLENIKHLMDNNGGPQFLHVVTKKGQGYKLAEADPIAYHGPGKFDPAMGLQKSSAPA 316

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
            Q++T  F + L   AE D  +V I  AM  G+G+  F +RFP R  DVGIAEQHAVTFA
Sbjct: 317 KQTFTQVFGQWLCDMAEHDARLVGITPAMREGSGMVEFHKRFPGRYHDVGIAEQHAVTFA 376

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AG+ACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+
Sbjct: 377 AGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDI 436

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            ++ C+PNM V  P+DE E   ++++A    D P   RYPRG G GVE   G +  PL  
Sbjct: 437 PYLRCIPNMSVACPADERECRKLLSSAFE-QDHPVAVRYPRGAGAGVEPEAGLE--PLPF 493

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG I  EG  VA+L +GT +   L A+  L +     TV + R+ KPLD  L+  +A  
Sbjct: 494 GKGEIRREGAGVAILAFGTLLYPALQAAEKLGA-----TVVNMRWAKPLDTELLLKVAAG 548

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           HE L+TVEEG+I GG GS V + L   G+    +    L L D +I+HG PA  LA  GL
Sbjct: 549 HEALVTVEEGAIMGGAGSAVSEALQAAGINKPVLH---LGLQDEFIEHGDPAKLLALQGL 605

Query: 537 TPSHIAATV 545
             + I A +
Sbjct: 606 DAAGIEAAI 614


>gi|325294213|ref|YP_004280727.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064661|gb|ADY72668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 619

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/562 (45%), Positives = 364/562 (64%), Gaps = 35/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            +T+RQ  G+SGF    ES YD FG GHSSTSISA LG+ VG+ LKG + +V+AVIGDGA
Sbjct: 87  FYTLRQYGGISGFPSIKESPYDVFGVGHSSTSISAALGIRVGKKLKGEEGHVIAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG+AYE +NNAG L  D+IVILNDN ++S+           +GA+S+ L+++ +   L
Sbjct: 147 LTAGEAYEGLNNAGQLGEDLIVILNDN-EMSISKN--------IGAISNYLTKVTTGEFL 197

Query: 121 RELREVAKGVTKQI-GGPMHELAAKVDEY-ARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
           R+ +   + VTK+I G  +++   +V++   +G+       LFEELG  Y+GP+DGH++D
Sbjct: 198 RKAKHRLEEVTKKIFGEKVYKGLKRVEDLIVKGLFPPG--MLFEELGFRYVGPIDGHDLD 255

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+  LE V  +K +GP L+HV+T+KG+GY  AE+  +++HG++       K+  S ++ 
Sbjct: 256 TLIVTLENV--SKMSGPTLVHVITKKGKGYEPAEEKPERFHGISP------KKTNSDSKQ 307

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT  F++ LI   +  KD+VAI AAM  GTGL+ F   FP R +DVGIAEQHAVTFAA
Sbjct: 308 PTYTEVFSKTLIEIGKKYKDIVAITAAMPSGTGLDKFKEVFPERYYDVGIAEQHAVTFAA 367

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A +GLKP  AIYS+F+QRA+DQ+VHDV LQ+LPV FA+DRAGLVG DG TH G+FD++
Sbjct: 368 GMAKKGLKPVVAIYSTFLQRAFDQIVHDVALQELPVVFAIDRAGLVGEDGATHHGAFDLS 427

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++  +PNMVV  P DE EL H++ TA    ++P   RYPRG G GV L      IP  +G
Sbjct: 428 YLRIIPNMVVAVPKDEEELRHLLYTAVR-SNKPFAVRYPRGRGYGVLLREPLYEIP--IG 484

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              +L +G+ +A+L  G  V   L A+  LE  G+ +TV +AR+ KPLD  L+R LAK +
Sbjct: 485 TWEVLRKGKDMAILANGWTVYQALDAAKELEKLGISVTVVNARYVKPLDEVLLRELAKEY 544

Query: 479 EVLITVEEGSI-GGFGSHVVQFLA---QDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           E+++TVEE ++ GGFGS V +FLA   Q  L++       + LPD +I+HG        A
Sbjct: 545 ELILTVEENTVKGGFGSTVDEFLAPWYQGKLVN-------IGLPDEFIEHGDQNLLRRLA 597

Query: 535 GLTPSHIAATVFNILGQTREAL 556
           G+    I   V   L +   +L
Sbjct: 598 GIDKEGIKKKVMEFLKKRASSL 619


>gi|373467319|ref|ZP_09558618.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sp. oral taxon
           851 str. F0397]
 gi|371758854|gb|EHO47610.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sp. oral taxon
           851 str. F0397]
          Length = 625

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/554 (46%), Positives = 353/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG + +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 IYSTLRDGSKKILDKVP-PVKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K + + 
Sbjct: 263 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKHNTKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADGPTH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN IGVEL P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAIGVELTPLEI---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ EG+++A+L +GT + S L A+  L +     TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIREGQKIAILNFGTLLPSALEAAGKLNA-----TVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     +++    LPD +I   +  + L   GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQFG---LPDYFIPQATQQEALKDLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 SKGIEEKILNFIAK 621


>gi|398910222|ref|ZP_10654918.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM49]
 gi|398186484|gb|EJM73858.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM49]
          Length = 632

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/563 (46%), Positives = 356/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A++       RE L++++ 
Sbjct: 617 AGIEASI-------RERLQLLNI 632


>gi|114776788|ref|ZP_01451831.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mariprofundus ferrooxydans
           PV-1]
 gi|114552874|gb|EAU55305.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mariprofundus ferrooxydans
           PV-1]
          Length = 620

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/551 (47%), Positives = 348/551 (63%), Gaps = 23/551 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  GL GFTKR+ES++D FG GH+STSISA  GMAVGRDL  + + VVAVIGDGA
Sbjct: 90  MPGIRQYGGLCGFTKRAESDHDPFGAGHASTSISAAYGMAVGRDLSHQDHQVVAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G A+EAMN+AG  ++ ++VILNDN+    P          VGA+SS L+R+ S R  
Sbjct: 150 LTGGMAFEAMNHAGGNNNKLLVILNDNEMSIAPN---------VGAMSSYLARIISGRSY 200

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            + ++ AK + +++ G + + A +V+E+ +GMI+    TLFEE+G  YIGPVDGH+ D L
Sbjct: 201 TQAKDTAKRILEKLPGAL-DAAKRVEEHVKGMITPG--TLFEEMGFRYIGPVDGHDFDHL 257

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  L+    ++  GP L+HVVT KG G+  AE+  + +HG+  +D  TG+ FKSS +  S
Sbjct: 258 LPTLQNC--SRLNGPTLLHVVTRKGLGFSPAEEDPETWHGLGPYDVKTGEPFKSSGQAAS 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  FA+ L   A+ D  VVAI AAM GGTGL  F  R P RCFDVGIAEQHAVTFA GL
Sbjct: 316 YTQVFADMLADMADADDRVVAITAAMPGGTGLTRFAARHPDRCFDVGIAEQHAVTFAGGL 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G +P+ AIYS+FMQRAYDQ++HD+ +Q LPV F +DRAG+VGADG TH G FD+ FM
Sbjct: 376 AASGKRPYVAIYSTFMQRAYDQIIHDICIQNLPVTFCLDRAGIVGADGATHTGMFDLAFM 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             LPNM VMAP DEAEL  M+ T+  ID  P   RYPRG+G GV +   +   PL VG  
Sbjct: 436 RNLPNMTVMAPKDEAELRRMLVTSLTIDG-PVAIRYPRGHGYGVSIEDSS---PLPVGHA 491

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLES-NGLRLTVADARFCKPLDHALIRSLAKSHE 479
            +L EG+   ++  G+ V   L A   L S +G  +T+ + RF KPLD   I    KS +
Sbjct: 492 EVLTEGDSGLVIAVGSRVHDALQAVETLRSEHGRAMTLLNLRFIKPLDEQAIMIHLKSGQ 551

Query: 480 VLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            LI VEEG + GG G  +     Q G       +  + +PD +  HG+ A+ L   GL  
Sbjct: 552 PLIIVEEGVAAGGAGQQIAVLALQHGWHG---PFAHIAMPDAFPAHGTQAEILRDLGLDA 608

Query: 539 SHIAATVFNIL 549
           + I + +  ++
Sbjct: 609 AGILSRLRQLI 619


>gi|146284018|ref|YP_001174171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri
           A1501]
 gi|166201531|sp|A4VQS8.1|DXS_PSEU5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145572223|gb|ABP81329.1| 1-deoxyxylulose-5-phosphate synthase [Pseudomonas stutzeri A1501]
          Length = 632

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 347/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +R ESEYD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPPAPKKPTGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYPDRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGLKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + P  +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNASIEPALE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G +VALL +G  +   L     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRRGSKVALLVFGVQLPEALQVGDALDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+TVEE SI GG GS V +FLA +G+L      RP++   LPD Y++H  P++ LA+ GL
Sbjct: 560 LVTVEENSIMGGAGSAVAEFLAAEGVL------RPILHLGLPDYYVEHAKPSEMLAECGL 613

Query: 537 TPSHIAATV 545
             + I   V
Sbjct: 614 DAAGIEVAV 622


>gi|365085342|ref|ZP_09327158.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
 gi|363417875|gb|EHL24926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acidovorax sp. NO-1]
          Length = 633

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/553 (46%), Positives = 355/553 (64%), Gaps = 33/553 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+SGF +R+ES YD FGT HSSTSISA LGMA+    KG   + VA+IGDGA
Sbjct: 90  MHTLRQLGGISGFPQRAESIYDTFGTAHSSTSISAALGMALAAKRKGENRHAVAIIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           M+AG A+EA+NNAG  D +++V+LNDN  +S+         PPVGAL+  L++L S +  
Sbjct: 150 MSAGMAFEALNNAGVADCNLLVVLNDN-DMSIS--------PPVGALNRYLAQLMSGQFY 200

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              + + K V + +  P+ ELA + ++ A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 201 AAAKNMGKTVLRPVP-PLLELAKRFEQQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 257

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDP+ G    ++   Q+
Sbjct: 258 IPTLENIKSLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPSVGLTKPATPPKQT 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   A  D  +V I  AM  G+G+  F +RFP R +DVGIAEQHAVTFAAG+
Sbjct: 316 FTQVFGQWLCDMAAQDPRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAAGM 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++D+ F+
Sbjct: 376 ACEGVKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAYDIPFV 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +  P+DE E   ++++A    D P   RYPRG+G GV      +G+P   GKG
Sbjct: 436 RCIPNMSMACPADERECRQLLSSAFE-QDHPVAVRYPRGSGAGVAPLAALEGLPF--GKG 492

Query: 421 RILIEGE-------RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
            I  E +       R+A+L +GT +   L A   L++     TV + R+ KP+D AL+R 
Sbjct: 493 EIRRERQGSDPKAPRIAILAFGTLLYPALQAGEALDA-----TVVNMRWAKPIDEALLRE 547

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           +A  H+ L+T+EEG+I GG GS V + L   G++   ++   L LPD +I+HG PA  LA
Sbjct: 548 VAGRHDALVTLEEGAIMGGAGSAVTEALNGMGIVRPVLQ---LGLPDVFIEHGDPAKLLA 604

Query: 533 QAGLTPSHIAATV 545
             GL  + I  +V
Sbjct: 605 LQGLDAAGIEKSV 617


>gi|114566129|ref|YP_753283.1| deoxyxylulose-5-phosphate synthase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|122318773|sp|Q0AZE2.1|DXS_SYNWW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114337064|gb|ABI67912.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 638

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/550 (45%), Positives = 353/550 (64%), Gaps = 27/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF K  ESEYD F TGHSSTSISA LGMA+ RDL+G+ N+VVAVIGDGA
Sbjct: 89  MSTLRQYGGISGFPKVEESEYDAFNTGHSSTSISAALGMALARDLQGQSNSVVAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG  DSD+IV+LNDN ++S+           VGA+S+ L+RL+++   
Sbjct: 149 LTAGMAFEALNHAGQEDSDLIVVLNDN-EMSISKN--------VGAMSAYLNRLRTDPSY 199

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARG----MISGSGSTLFEELGLYYIGPVDGHN 176
              +E  + V  +I G    LA    ++       M+ G    +FEELG  YIGPV+GH+
Sbjct: 200 SRTKEEIESVLNRIPGIGPNLARAAGKFKDTVKYLMVPG---IIFEELGFTYIGPVNGHD 256

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           + +L A+L  +K  K  GP+L+H +T+KG+GY  A +  D +HGV  FD  TG Q K S 
Sbjct: 257 LAELKAVLSNIKKMK--GPILLHTITQKGKGYEPAFQKPDIFHGVGPFDVDTGTQLKKSL 314

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +T  YT  F + ++ +A+ D  +VAI AAM  GTGL+ F R FP R FDVGI EQHAVT 
Sbjct: 315 KT--YTEIFGDFMLNQAQRDNKLVAITAAMTSGTGLSEFSRNFPERFFDVGICEQHAVTL 372

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+A  GL+P  A+YS+F+QRAYDQ+VHDV LQKLPV FA+DRAGLVG DGPTH G+FD
Sbjct: 373 AAGMASSGLRPVVAVYSTFLQRAYDQIVHDVALQKLPVIFAIDRAGLVGEDGPTHHGAFD 432

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
            +++  +PN+++MAP+DE EL  M+ +A +++  P   RYPRG G GV +    +   LE
Sbjct: 433 FSYLRHIPNLIIMAPADENELVDMLHSAFSMEG-PVAIRYPRGVGEGVRIKSERQ--LLE 489

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
            G+ R++ EG+ +A++  G  V        LL   G+   + DARF KPLD  +I   A+
Sbjct: 490 PGQSRLIAEGQDLAIIAVGRGVSIARDVVDLLAGKGVNPLLVDARFVKPLDRRVIAGAAQ 549

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
            +  L+T+E+ S+ GGFGS + + L ++G+     +   + LPD +++HG       Q  
Sbjct: 550 KYHRLLTIEDNSLAGGFGSAIGEMLVEEGI---DAELLHIALPDEFVEHGRVELLFEQLN 606

Query: 536 LTPSHIAATV 545
           + P  I  ++
Sbjct: 607 MNPDSILESI 616


>gi|254362650|ref|ZP_04978737.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           PHL213]
 gi|452745878|ref|ZP_21945710.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype 6 str. H23]
 gi|153094269|gb|EDN75133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           PHL213]
 gi|452086017|gb|EME02408.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype 6 str. H23]
          Length = 617

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/549 (46%), Positives = 347/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DG+  F  R ES YD    GHSSTSISAGLG+AV  + +      V VIGDGA
Sbjct: 92  MHTIRQKDGIHPFPWREESPYDVLSVGHSSTSISAGLGIAVAAEKENAGRKTVCVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 152 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSLY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ +K +  ++   +     K +E+ +G+I    STLFEELG  YIGP+DGHN+D+L
Sbjct: 203 TSVRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDEL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  ++  K  GP  +H+ T+KG+GY  AE     YHGV KFDP   +  KS A   +
Sbjct: 262 VKTLSNMRELK--GPQFLHIRTKKGKGYTPAENDPIGYHGVPKFDPTAAELPKSKA-APT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTF AGL
Sbjct: 319 YSNIFGDWLCEMAERDPKIIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYSSF+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 379 AIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFM 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +MAPSDE E+  M+ TA  + + PS  RYPRGN  GV+L P  +   LEVGKG
Sbjct: 439 RCIPNMTIMAPSDENEMRKMLYTAYTM-NTPSAIRYPRGNAKGVKLEPMQR---LEVGKG 494

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I+ EG++VA+L +G      L   A + +     T+ D RF KPLD AL++ +A SHE+
Sbjct: 495 NIIREGKKVAILNFG-----ALLDEAKIVAEKHNYTLVDMRFIKPLDEALLQKVADSHEL 549

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG GS V ++L   G      K +PLV+   PD ++   + A+  A  GL
Sbjct: 550 LVTLEENAIQGGAGSFVNEYLQNIG------KIKPLVMLGIPDFFVPQSTQAEAYADLGL 603

Query: 537 TPSHIAATV 545
               I A +
Sbjct: 604 DAQGIEAKI 612


>gi|146308858|ref|YP_001189323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina ymp]
 gi|166201529|sp|A4XZ25.1|DXS_PSEMY RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145577059|gb|ABP86591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mendocina ymp]
          Length = 631

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 261/557 (46%), Positives = 350/557 (62%), Gaps = 32/557 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   LKG K   VAVIGDGA
Sbjct: 102 MGSLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHATDVGANMLVILNDN-DMSISKN--------VGGLSNYLAKIISSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A KV+E+A+GM+     TLFEELG  Y+GP+DGH++  L
Sbjct: 213 ASMREGSKKILSRLPGAW-EIARKVEEHAKGMLVPG--TLFEELGWNYVGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     YH + K +P T            
Sbjct: 270 LATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPIGYHAITKLEPVTPSAVPRKPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D+ +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADQRLVGITPAMKEGSDLVAFAERFPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+G+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACDGVKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDISYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M+ T    D  P+  RYPRG+G    L  G +   LE+GK 
Sbjct: 448 RCIPGMLVMTPSDENELRRMLTTGYLFDG-PAAVRYPRGSGPNAPLDAGLE--LLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G+  ALL +G  +     A AL     L  TV D RF KPLD AL+R LA SHE+
Sbjct: 505 IVRRQGKGAALLVFGVQL-----AEALQVGEALNATVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE ++ GG GS V +FLA   ++      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAVMGGAGSAVSEFLAAQNII------KPLLHLGLPDYYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATVFNILGQTR 553
             + I   V   L Q R
Sbjct: 614 DQAGIERAVRERLDQLR 630


>gi|398948107|ref|ZP_10672587.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM33]
 gi|398161115|gb|EJM49358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM33]
          Length = 632

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/562 (46%), Positives = 356/562 (63%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMS 560
           + I A++       RE L++++
Sbjct: 617 AGIEASI-------RERLQLLN 631


>gi|217970188|ref|YP_002355422.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thauera sp. MZ1T]
 gi|217507515|gb|ACK54526.1| deoxyxylulose-5-phosphate synthase [Thauera sp. MZ1T]
          Length = 622

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/557 (48%), Positives = 350/557 (62%), Gaps = 27/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G+SGF +R ESEYD FGT HSSTSISA LGMAV    +G   + +AVIGDGA
Sbjct: 91  MTGLRHFGGISGFPRRCESEYDTFGTAHSSTSISAALGMAVAARARGEDRHAIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EA+NNAG +++ +++VILNDN ++S+         PPVGAL+  L+R+ S   
Sbjct: 151 MSAGMAFEALNNAGDMENLNLLVILNDN-EMSIS--------PPVGALTKILARMMSGST 201

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R V + V   +  P+ ELA KV+EYA+GMI G G TLFEE G +Y GP+DGH++D 
Sbjct: 202 YNTARRVGEKVLG-VAPPVAELARKVEEYAKGMI-GPG-TLFEEFGFHYYGPIDGHDLDA 258

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  K  GP  +HV+T KG+GY  AE     YHGV+KFD   G Q        
Sbjct: 259 LIPTLQNLRKLK--GPQFLHVITRKGQGYKLAEADPVLYHGVSKFDHTAGIQTGKGGGKL 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F + L   A+ D  +V I  AM  G+GL  F + FP R FDVGIAEQHAVTFAAG
Sbjct: 317 TYTQVFGDWLCDMAKADPRIVGITPAMREGSGLVRFAQEFPERYFDVGIAEQHAVTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG  P  AIYS+F+QRAYDQ++HDV LQ LPV FA+DR GLVGADG TH G+FD++F
Sbjct: 377 LACEGFVPVVAIYSTFLQRAYDQLIHDVALQNLPVVFAIDRGGLVGADGATHHGAFDLSF 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           ++C+PNMVVMAPSDE E   M+ TA      PS  RYPRG G G       + +P  +GK
Sbjct: 437 LSCVPNMVVMAPSDEDECRQMLYTAVQ-HAGPSAVRYPRGGGNGTAPRAQMRALP--IGK 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G ++  G  +ALL +G+ +      +  L++     TVA+ RF KPLD  L+  LA SH+
Sbjct: 494 GEVVRRGRGIALLAFGSLLGVAREVAETLDA-----TVANMRFVKPLDVELVAELATSHD 548

Query: 480 VLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +++T+EE + IGG G+ V + +  DGL       R L LPD +IDHG  A  LA  GL  
Sbjct: 549 LIVTLEENAVIGGAGAEVSRLV--DGLATRPRVLR-LGLPDHFIDHGDQAQLLASVGLDQ 605

Query: 539 SHIAATVFNILGQTREA 555
             I A++    G    A
Sbjct: 606 DGILASIARATGAPERA 622


>gi|428781127|ref|YP_007172913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dactylococcopsis salina
           PCC 8305]
 gi|428695406|gb|AFZ51556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Dactylococcopsis salina
           PCC 8305]
          Length = 637

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/552 (46%), Positives = 347/552 (62%), Gaps = 25/552 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ DG++G+ KR ES++D FG GH+STSISAGLGMA+ RD KG    VV++IGDGA+T
Sbjct: 89  TLRQKDGIAGYLKRCESQFDHFGAGHASTSISAGLGMALARDAKGENFKVVSIIGDGALT 148

Query: 63  AGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLR 121
            G A EA+N+AG++ D++++V+LNDN+    P          VGA+S  L++++ + P++
Sbjct: 149 GGMALEAINHAGHIPDTNLMVVLNDNEMSISPN---------VGAISRYLNKVRLSPPMQ 199

Query: 122 ELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHNV 177
            L +  +   K +      L  +++    GM    +   G+ + EELG  Y GP+DGHN+
Sbjct: 200 FLTDNLEEQFKHLPFFGESLTPEMERMKEGMKRLAVPKVGAVI-EELGFKYFGPIDGHNL 258

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSSA 236
            +L+   ++    +  GPVL+HV T KG+GY  AEK    YH  + F+ ATGK Q  S  
Sbjct: 259 TELIHTFQQAH--QVPGPVLVHVATTKGKGYSIAEKDQVGYHAQSAFNIATGKAQPSSKP 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +   Y   FA  L   AE +  ++ I AAM  GTGL+   ++ P +  DVGIAEQHAVT 
Sbjct: 317 KPPKYCKVFAHTLTQLAENNPKIIGITAAMATGTGLDKLQQKLPDQYVDVGIAEQHAVTL 376

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G +D
Sbjct: 377 AAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMYD 436

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PL 415
           + ++ CLPNMV+MAP DEAEL  M  T     D P   RYPRGNGIGV  P   +G  P+
Sbjct: 437 IAYLRCLPNMVIMAPKDEAELQRMTVTGVNYTDGPIAMRYPRGNGIGV--PLMEEGWDPV 494

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+GKG IL  G+ V +LGYG  V + L A+ +L  +G+  TV +ARF KPLD  LI  LA
Sbjct: 495 EIGKGEILRNGDDVLVLGYGAMVPTALQAAEILSEHGIEATVVNARFVKPLDTELIFPLA 554

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           K    ++T+EEG + GGFGS V +      LL   V  +   +PD+ +DH  P +  A  
Sbjct: 555 KQIGRVVTLEEGCLMGGFGSAVTEAFMDHNLL---VPVKRFGVPDQLVDHAKPEEAKADL 611

Query: 535 GLTPSHIAATVF 546
           GL+ S IA  V 
Sbjct: 612 GLSSSQIAEQVL 623


>gi|255022131|ref|ZP_05294134.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
           ATCC 51756]
 gi|340782899|ref|YP_004749506.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
           SM-1]
 gi|254968395|gb|EET25954.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
           ATCC 51756]
 gi|340557050|gb|AEK58804.1| 1-deoxy-D-xylulose 5-phosphate synthase [Acidithiobacillus caldus
           SM-1]
          Length = 624

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/558 (48%), Positives = 351/558 (62%), Gaps = 32/558 (5%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +R  DGLSGF KR ES +D FG GHSSTSISA LGMAV   L  R+  VVA+IGDGAMTA
Sbjct: 92  LRMKDGLSGFLKRDESPFDAFGAGHSSTSISAALGMAVAAKLTQRQRQVVAIIGDGAMTA 151

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 123
           G AYEA+NNAG LD+D++V+LNDN+    P          VGA+S  L+R+ S R    +
Sbjct: 152 GLAYEALNNAGVLDADLLVVLNDNEMSISPN---------VGAVSQYLTRILSGRFYNSM 202

Query: 124 REVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAI 183
           RE A G    +  P+ ELA K +E  +G++S     LFEE+G +Y GP+DGH++D L+  
Sbjct: 203 REGA-GQALSLVPPLRELARKAEEGVKGLVSPG--VLFEEMGFHYYGPIDGHDLDVLIPT 259

Query: 184 LEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTT 243
           LE +K  K  GP L+HV+T KG+G+  AE     YHGV  FD   G+  K S    SYT 
Sbjct: 260 LENLKKIK--GPRLLHVITRKGKGFAPAEADPCTYHGVTPFDRQDGRMVKKSGGAPSYTQ 317

Query: 244 YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACE 303
            F + +  +A  +  +VAI  AM  G+GL  F + +P R FDVGIAEQHAVTFAAGLACE
Sbjct: 318 VFGDWICDKAAAESTLVAITPAMREGSGLVRFQQLYPERYFDVGIAEQHAVTFAAGLACE 377

Query: 304 GLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACL 363
           G +P  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVGADG TH G+FD+ +  C+
Sbjct: 378 GQRPVVAIYSTFLQRAYDQLLHDVAIQNLPVLFAIDRAGLVGADGATHQGAFDMAYARCI 437

Query: 364 PNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL 423
           PN+ +MAP DE EL  M+ T  A+   P+  RYPRG G+GV L   + G  + VGK  +L
Sbjct: 438 PNLTIMAPKDEQELRDMLNTGFALPG-PALVRYPRGAGVGVPL-DRDLGRTIPVGKAELL 495

Query: 424 IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLIT 483
             G R+A+L +GT      AA+AL     L  TV + RF KPLD  L+ +LA+ HE  +T
Sbjct: 496 RRGRRLAILSFGTR-----AAAALQAGETLDATVVNMRFVKPLDTELLSTLAQDHEAFVT 550

Query: 484 VEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIA 542
           VEEG ++GG G+ V + L   GL       R L LPDR+I+ G     LA+ GL  +   
Sbjct: 551 VEEGCTLGGAGAGVAEALLDLGL---RPSMRILGLPDRFIEQGDAEAWLAELGLDAA--- 604

Query: 543 ATVFNILGQTREALEIMS 560
                I+G  RE LE ++
Sbjct: 605 ----GIVGAGRELLERLA 618


>gi|145636151|ref|ZP_01791821.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittHH]
 gi|148825982|ref|YP_001290735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittEE]
 gi|229846703|ref|ZP_04466810.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           7P49H1]
 gi|166198620|sp|A5UC51.1|DXS_HAEIE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|145270673|gb|EDK10606.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittHH]
 gi|148716142|gb|ABQ98352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittEE]
 gi|229810192|gb|EEP45911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           7P49H1]
          Length = 625

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 355/554 (64%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 LYSTLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA+L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++ 
Sbjct: 263 ELVAMLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDIS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 TKGIEEKILNFIAK 621


>gi|398879894|ref|ZP_10634975.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM67]
 gi|398195212|gb|EJM82263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM67]
          Length = 632

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/562 (45%), Positives = 355/562 (63%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAATDPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYNGPAAVRYPRGNGPNATIEKDLQ--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD  L+R +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEELVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDLYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMS 560
           + I A++       RE L++++
Sbjct: 617 AGIEASI-------RERLQLLA 631


>gi|417841999|ref|ZP_12488094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M19501]
 gi|341947779|gb|EGT74420.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M19501]
          Length = 625

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/554 (46%), Positives = 352/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG + +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 IYSTLRDGSKKILDKVP-PVKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K + + 
Sbjct: 263 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKHNTKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADGPTH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN IGVEL P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAIGVELTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ EG+++A+L +GT     L  SAL  +  L  TV D RF KP+D  +I  LA+SH
Sbjct: 496 KSRLIREGQKIAILNFGT-----LLPSALEPAEKLNATVVDMRFVKPIDIEMIDVLAQSH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA   L 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLRLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 TKGIEEKILNFIAK 621


>gi|388547623|ref|ZP_10150885.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M47T1]
 gi|388274223|gb|EIK93823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. M47T1]
          Length = 632

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/550 (46%), Positives = 347/550 (63%), Gaps = 26/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQNSGRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P         A    
Sbjct: 270 VATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLNAPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D+ +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADQRLVGITPAMKEGSDLVDFSERYPDRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P MVVM PSDE EL  M++T   + + P+  RYPRG G    +    +   LE+GKG
Sbjct: 448 RCIPGMVVMTPSDENELRKMLST-GHLHEGPAAVRYPRGTGPNAAIDSSLEA--LEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  EG + ALL +G  +     A AL  +  L  TV D RF KPLD  L+R +A  HE+
Sbjct: 505 VIRREGSKAALLVFGVQL-----AEALKVAEKLDATVVDMRFVKPLDETLVRDIAARHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE SI GG G+ V +FLA++ LL   +    L LPD Y++H  PA  LA+ GL  +
Sbjct: 560 LVTIEENSIMGGAGAAVSEFLARENLLKPVLH---LGLPDTYVEHAKPAQMLAECGLDEA 616

Query: 540 HIAATVFNIL 549
            I A +   L
Sbjct: 617 GIEAAIVKRL 626


>gi|292491350|ref|YP_003526789.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus halophilus Nc4]
 gi|291579945|gb|ADE14402.1| deoxyxylulose-5-phosphate synthase [Nitrosococcus halophilus Nc4]
          Length = 640

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/542 (47%), Positives = 342/542 (63%), Gaps = 37/542 (6%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL+ F  R ES YD FG GHSSTSISA LGMA+    +G     +A+IGDG MT
Sbjct: 96  TIRQAGGLAPFPARHESPYDIFGVGHSSTSISAALGMAIAAKQRGENRKSIAIIGDGGMT 155

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG AYEA+++AG LD+D++VILNDN+    P          VGA+SS L+RL S R    
Sbjct: 156 AGMAYEALDHAGALDADLLVILNDNEMSISPN---------VGAISSYLTRLLSGRVYST 206

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           +RE +K V + +  PM ELA + +E+ +GM++    TLFEE+G  Y GP+DGH++  LV 
Sbjct: 207 VREGSKKVLEHMPPPMWELARRTEEHVKGMVAPG--TLFEEMGFNYFGPMDGHDLASLVR 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQF--KSSARTQS 240
            L  +   K +GP L+H+VT KG+GY  AE+    YHGV  FDP  G Q   K  +   S
Sbjct: 265 TLRNLH--KLSGPRLLHIVTRKGKGYTLAEENPVTYHGVTPFDPKVGLQHAPKKPSPAVS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L   A  D  +V I  AM  G+GL  F   FP R FDVGIAEQH+VT AAG+
Sbjct: 323 YTQVFSQWLCDMAAQDAHLVGITPAMREGSGLVKFSECFPERYFDVGIAEQHSVTLAAGM 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAG+VG DGPTH GSFD++++
Sbjct: 383 ACDGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGVVGPDGPTHAGSFDLSYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMVVMAP+DE E   M+ T   + ++P+  RYPRG G GV +      +P  VGK 
Sbjct: 443 RCVPNMVVMAPADENECRQMLYTGFLL-EQPAAVRYPRGKGPGVAVEAKMTALP--VGKA 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EG+ +A+L +G  V   L A+  L++     +V + RF KPLD  +I  +A SHE+
Sbjct: 500 ELKREGQGIAILAFGAMVAPALEAAEKLDA-----SVVNMRFVKPLDENMILEMAMSHEL 554

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDG-----LLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           L+TVE+ +I GG GS V + LA  G     LL G        LPD Y++HGS  + LA  
Sbjct: 555 LVTVEDNAIAGGAGSAVNECLANHGIPVPVLLHG--------LPDCYLEHGSREELLAHC 606

Query: 535 GL 536
            L
Sbjct: 607 HL 608


>gi|261346382|ref|ZP_05974026.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rustigianii
           DSM 4541]
 gi|282565700|gb|EFB71235.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia rustigianii
           DSM 4541]
          Length = 621

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/547 (47%), Positives = 350/547 (63%), Gaps = 32/547 (5%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ +GL  F  R+ESEYD    GHSSTSISAGLGMA+  + + +    V VIGDGA+T
Sbjct: 97  TIRQKNGLHPFPWRAESEYDILSVGHSSTSISAGLGMAIAAEKEDKNRKTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG    DM+VILNDN ++S+           VGAL++ L+ L S +    
Sbjct: 157 AGMAFEAMNHAGDAAPDMLVILNDN-EMSISEN--------VGALNNHLAHLLSGKLYTT 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   I  P+ EL  K +E+ +GM+     T+FEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSNIP-PIKELLKKTEEHIKGMVVPG--TMFEELGFNYIGPVDGHDVVALIQ 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDPAT    KS     +++
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPISWHAVPKFDPATFTLPKSKDTRPTFS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L  EA+ D  ++A+  AM  G+G+  F + +P + FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCEEAKNDDKLMAVTPAMREGSGMVRFSKEYPNQYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G  P  AIYS+F+QR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GSFD++F+ C
Sbjct: 383 GGYNPVVAIYSTFLQRGYDQVIHDVAIQKLPVMFAIDRAGIVGADGQTHQGSFDISFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+MAPSDE E   M+ T     + P+  RYPRG G+G EL P +   PLE+GKG +
Sbjct: 443 IPTMVIMAPSDENECRQMLHTGYHYQEGPTAVRYPRGAGVGAELMPLS---PLEIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
             +GE+VA+L +GT + + L A+  L +     TV D RF KPLD ALI  +A SH++L+
Sbjct: 500 RRQGEKVAILSFGTLLSNALEAAEQLNA-----TVVDMRFVKPLDEALILDMANSHDMLV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTP 538
           T+EE +I GG GS V +FL ++       K  P++   LPD +I  G+  + LA  GL  
Sbjct: 555 TLEENAIMGGAGSGVNEFLMREK------KVLPILNLGLPDFFIPQGTQEELLADLGLDA 608

Query: 539 SHIAATV 545
           + I  ++
Sbjct: 609 AGIVKSI 615


>gi|145632791|ref|ZP_01788524.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145634983|ref|ZP_01790690.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
 gi|144986447|gb|EDJ93013.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           3655]
 gi|145267849|gb|EDK07846.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittAA]
          Length = 625

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 355/554 (64%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 LYSTLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA+L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++ 
Sbjct: 263 ELVAMLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDIS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATRQEALADLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 TKGIEEKILNFIAK 621


>gi|241663624|ref|YP_002981984.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia pickettii 12D]
 gi|240865651|gb|ACS63312.1| deoxyxylulose-5-phosphate synthase [Ralstonia pickettii 12D]
          Length = 636

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/554 (47%), Positives = 352/554 (63%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G    G     +AVIGDGA
Sbjct: 90  MGSLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMALGAKTNGEDRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+ +GM   +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHTKGMFVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +    
Sbjct: 256 ESLVPTLQNIRQRAREGGGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPSGR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               +YT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PAKVTYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM P+DE E   +++TA A  D P+  RYPRG G GV + P  + +P+
Sbjct: 436 DIAYLRCIPNMMVMTPADENECRQLLSTAFA-QDGPTAVRYPRGAGTGVAVQPTLEPLPV 494

Query: 416 ---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +      G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A + 
Sbjct: 495 GKAEVRRASTAPAGQRVAILAFGSMVAPASAAAERLDA-----TVVNMRFVKPLDVACVL 549

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR++DHG  A  L
Sbjct: 550 EMARTHDYVVTVEEGCVMGGAGSACLEALACAGVATPVLQ---LGLPDRFVDHGDHAALL 606

Query: 532 AQAGLTPSHIAATV 545
           AQ GL  + I A +
Sbjct: 607 AQCGLDANGILACI 620


>gi|16273346|ref|NP_439591.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae Rd
           KW20]
 gi|145629448|ref|ZP_01785246.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|260580725|ref|ZP_05848551.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           RdAW]
 gi|1175801|sp|P45205.1|DXS_HAEIN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|1574278|gb|AAC23088.1| 1-deoxyxylulose-5-phosphate synthase (dxs) {Escherichia coli)
           [Haemophilus influenzae Rd KW20]
 gi|144978291|gb|EDJ88055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           22.1-21]
 gi|260092542|gb|EEW76479.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           RdAW]
          Length = 625

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 354/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 LYSTLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++ 
Sbjct: 263 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDIS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 TKGIEEKILNFIAK 621


>gi|409397082|ref|ZP_11248025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Chol1]
 gi|409118584|gb|EKM94983.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Chol1]
          Length = 632

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/556 (45%), Positives = 347/556 (62%), Gaps = 26/556 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +RSESEYD FG GHSSTSI A LGMA+   LKG K   +AVIGDGA
Sbjct: 102 MSTLRQKDGLAAFPRRSESEYDTFGVGHSSTSIGAALGMAIAARLKGEKRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG +S+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGMSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPAKPKQPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+  R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYADRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGLKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M++M PSDE E+  M+ T    +  P+  RYPRG+G    + PG    PLE+GKG
Sbjct: 448 RCIPGMLIMTPSDENEMRRMLTTGYLFEG-PAAVRYPRGSGPNATIEPGLA--PLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G+RVALL +G  +   L     L++     TV D RF KPLD AL+R LA  HE 
Sbjct: 505 VVRRQGKRVALLVFGVQLPEALQVGETLDA-----TVVDMRFVKPLDEALLRRLAAEHEF 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE S+ GG GS V +FLA + ++   +    L LPD Y++H  P + LA+ GL  +
Sbjct: 560 LVTIEENSVMGGAGSAVAEFLAAEAVVMPLLH---LGLPDSYVEHAKPNEMLAECGLDAA 616

Query: 540 HIAATVFNILGQTREA 555
            I A V   L    EA
Sbjct: 617 GIEAAVRQRLAALGEA 632


>gi|402698240|ref|ZP_10846219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fragi A22]
          Length = 632

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/547 (46%), Positives = 354/547 (64%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MATLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P    +    A +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEADPIGYHAITKLEPLDAPKAAPKAASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A VD+ +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSAVFGEWLCDMAAVDQRLVGITPAMKEGSDLIAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P MV+M PSDE EL  M+ T   + + P+  RYPRG+G    +    +  PLE+GK
Sbjct: 448 LRCIPGMVIMTPSDENELRKML-TTGHLYNGPAAVRYPRGSGPNASIEKTLE--PLEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G +VA+L +G  +     A AL  +  +  TV D RF KP+D AL+R +A SHE
Sbjct: 505 GVIRRKGSKVAMLVFGVQL-----AEALQVAEKIDATVVDMRFVKPMDEALVREMADSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G+ V + LA++ +L   +    L LPD Y++H  P+  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGAAVSELLARENVLKSVLH---LGLPDVYVEHAKPSQMLAECGLDA 616

Query: 539 SHIAATV 545
           + I A+V
Sbjct: 617 AGIEASV 623


>gi|188996591|ref|YP_001930842.1| 1-deoxy-D-xylulose-5-phosphate synthase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931658|gb|ACD66288.1| deoxyxylulose-5-phosphate synthase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 631

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/529 (46%), Positives = 336/529 (63%), Gaps = 24/529 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
             T+RQ  G+SGF+K  ES+YD FGTGHSSTSISA LG  VG+DLK      +AVIGDGA
Sbjct: 91  FRTLRQYKGISGFSKIKESKYDHFGTGHSSTSISAALGFRVGKDLKKDDVYTIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLD-SDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAGQA+E +NNAG+LD S  IVILNDN Q+S+         P VGA+ +  +++ + + 
Sbjct: 151 MTAGQAFEGLNNAGWLDPSRFIVILNDN-QMSIS--------PNVGAIYTYFNKIITKQV 201

Query: 120 LRELREVAKGVTKQIGGPMH-ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++ R+  K    +I G    ++  K++EY +G+ +     +FEELG  Y+GP+DGH++ 
Sbjct: 202 FQKPRQKLKEAINKIFGEQGVKIFRKIEEYTKGLFAPG--LIFEELGFTYVGPIDGHSLF 259

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           DL   LE +K  +  GP+L+HV+T+KG+GY YAE+    +HGV+ FD  +G  F  S+  
Sbjct: 260 DLEQTLENIKQMR--GPILLHVITQKGKGYKYAEENPTTFHGVSPFDKISG-VFNKSSNL 316

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F +AL+  AE D  +VAI  AM  G+GL  F  +FP R FDVGIAEQHA TFA 
Sbjct: 317 PTYSKVFGDALVELAEKDDKIVAITPAMKEGSGLVKFAEKFPDRFFDVGIAEQHAATFAG 376

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
            LA EG KP  A YS+F+QRAYDQV+HD+ LQ+LPV FA+DR GLVG DGPTH G FD+ 
Sbjct: 377 ALALEGFKPVAAYYSTFLQRAYDQVIHDIALQELPVFFAIDRGGLVGDDGPTHHGVFDIA 436

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  +PNM++ +P DE EL  ++        RP   RYPRG G GV++   N    +E+G
Sbjct: 437 FLRPIPNMIIASPKDEQELRDLLYIGLN-SKRPFALRYPRGTGYGVKIEGFN---TIEIG 492

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              IL EG  +A+L  G  V   L     L   G   TV +ARF KP+D  L+  L K+H
Sbjct: 493 SWEILDEGRDIAILAVGKYVYRALEVKKQLRLKGFNPTVVNARFIKPMDENLLNKLLKTH 552

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGS 526
           E +IT E+G + GGFGS V +F+  +G  +  +++    +PD++I+HG 
Sbjct: 553 EFVITAEDGVLNGGFGSAVAEFVIDNGYSNKVLRFG---IPDKFIEHGK 598


>gi|428209085|ref|YP_007093438.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chroococcidiopsis
           thermalis PCC 7203]
 gi|428011006|gb|AFY89569.1| 1-deoxy-D-xylulose-5-phosphate synthase [Chroococcidiopsis
           thermalis PCC 7203]
          Length = 636

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/555 (46%), Positives = 347/555 (62%), Gaps = 29/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RDLKG K  V A+IGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAALGMALARDLKGDKFKVAAIIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++VILNDN+    P          VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVILNDNEMSISPN---------VGAISRYLNKMRLSAP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K I      L  ++     GM    +S  G+ + EELG  Y+GPVDGH
Sbjct: 198 VQFLADNLEEQVKHIPFVGESLTPELHRLKGGMKRLAVSKVGA-IIEELGFTYLGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+ +L+A  E+  + +  GPVL+HV T KG+GY  AEK    YH  + FD  TGK   SS
Sbjct: 257 NLAELIATFEQAHHIQ--GPVLVHVATVKGKGYEIAEKDQVGYHAQSPFDLTTGKAIPSS 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +   Y+  FA  L+  AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAV
Sbjct: 315 KPKPPGYSKVFAHTLVKLAENNPKIIGITAAMATGTGLDKLASKLPKQYVDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T  AGLACEG++P  AIYS+F+QRAYDQ+VHDV +Q LPV F MDRAG+VG+DGPTH G 
Sbjct: 375 TLGAGLACEGMRPVVAIYSTFLQRAYDQIVHDVCIQNLPVFFCMDRAGIVGSDGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGI 413
           +D+ ++ CLPNMV+MAP DEAEL  MV T     D P   RYPRGNG GV L   G + +
Sbjct: 435 YDIAYLRCLPNMVLMAPKDEAELQQMVVTGVNYTDGPIAMRYPRGNGYGVPLMEEGWESL 494

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P  +GKG IL  G+ + L+G+G  V   +  + +L  +G+  TV +ARF KPLD  LI  
Sbjct: 495 P--IGKGEILRHGDDLLLIGFGAMVHPAMQVAEILREHGIEATVINARFAKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT--VKWRPLVLPDRYIDHGSPADQ 530
           LA+    ++T+EEG + GGFGS V      + LLD    V  + + +PD  +DH  P + 
Sbjct: 553 LAQQIGRVVTLEEGCLMGGFGSAVA-----EALLDANVVVPVKRIGIPDTLVDHAEPNES 607

Query: 531 LAQAGLTPSHIAATV 545
            A  GLT   IA TV
Sbjct: 608 KADLGLTSPQIAETV 622


>gi|428298117|ref|YP_007136423.1| 1-deoxy-D-xylulose-5-phosphate synthase [Calothrix sp. PCC 6303]
 gi|428234661|gb|AFZ00451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Calothrix sp. PCC 6303]
          Length = 635

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/555 (44%), Positives = 350/555 (63%), Gaps = 25/555 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR E+++D FG GH+STSISAGLGMA+ RD KG K  VV++IGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAGLGMAMARDAKGEKFKVVSIIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG++  ++++V+LNDN+    P          VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHMPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKMRLSPP 197

Query: 120 LR----ELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH 175
           ++     + E  K +   +G  +    A++ E  + +       +FEELG  Y+GPVDGH
Sbjct: 198 IQFFSGNIEEQFKNIPF-VGESLSPELARIKEGMKRLAVPKVGAVFEELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+   ++    + TGPVL+HV T KG+GY  AEK    YH    F+P TGK   S+
Sbjct: 257 NLEELITTFQQAH--QITGPVLVHVATTKGKGYEIAEKDQVGYHAQTPFNPTTGKAIPST 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +  +Y   FA  L+  AE +  ++ I AAM  GTGL+   ++ P +  DVGIAEQHAV
Sbjct: 315 KPKPPAYAKVFAHTLVKLAEQNPKIIGITAAMATGTGLDKLQQKLPNQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T +AGLACEG++P  AIYS+F+QRA+DQ++HDV +Q LPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLSAGLACEGMRPVVAIYSTFLQRAFDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI- 413
           +D+ ++ C+PNMV+MAP DEAEL  M+ T       P   R+PRG+G GV  P   +G  
Sbjct: 435 YDIAYLRCIPNMVLMAPKDEAELQRMIVTGVDYTSGPIAMRFPRGSGYGV--PLMEEGWE 492

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           PLE+GKG IL  G+ V L+ YGT V S +  + +L  +G++ TV +ARF KPLD  LI  
Sbjct: 493 PLEIGKGEILRHGDDVLLVAYGTMVNSAMQTAEVLNEHGIQATVVNARFAKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LAK    ++T+EEG + GGFG+ V + L      D  V  + + +PD  +DH  P     
Sbjct: 553 LAKKIGRVVTLEEGCVMGGFGTAVAEALLD---ADVVVPVKRIGIPDILVDHAEPDQSKV 609

Query: 533 QAGLTPSHIAATVFN 547
           + GLT S IA +V  
Sbjct: 610 ELGLTSSQIAESVMT 624


>gi|319897072|ref|YP_004135267.1| 1-deoxy-d-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3031]
 gi|317432576|emb|CBY80936.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3031]
          Length = 621

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/554 (46%), Positives = 354/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 91  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 148

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 149 GAITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 199

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 200 LYSTLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 258

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++ 
Sbjct: 259 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP 316

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 317 -TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFAT 375

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++
Sbjct: 376 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDIS 435

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +G
Sbjct: 436 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H
Sbjct: 492 KSRLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTH 546

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL 
Sbjct: 547 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLD 603

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 604 TKGIEEKILNFIAK 617


>gi|444334832|ref|ZP_21150275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. A160]
 gi|443549836|gb|ELT58429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. A160]
          Length = 526

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/552 (46%), Positives = 357/552 (64%), Gaps = 28/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GL  F  R ESE+D    GHSSTSISAGLG+A+  + +      V VIGDGA
Sbjct: 1   MPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSISAGLGIAIAAERENAGRKTVCVIGDGA 60

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+RL S    
Sbjct: 61  ITAGMAFEALNHAGSLHTDMLVILNDN-EMSISEN--------VGALNNHLARLLSGSFY 111

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K +   +  P+ E   K +E+ +G++S  GST+FEELG  YIGP+DGHNV++L
Sbjct: 112 SSIREGGKKILSGVP-PIKEFVKKTEEHVKGLVS-PGSTMFEELGFNYIGPIDGHNVEEL 169

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           ++ L+ + + K  GP  +H+VT+KG+GY  AEK    +HGV KF+  +G+  KS+A T +
Sbjct: 170 ISTLQNMSSLK--GPQFLHIVTKKGKGYTPAEKDPIGFHGVPKFNHLSGELPKSNA-TPT 226

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFAAGL
Sbjct: 227 YSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVEFSQRFPQQYFDVAIAEQHAVTFAAGL 286

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 287 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGQTHQGAFDISFM 346

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+M PSDE E   M+ T      +P+  RYPRGN +GVEL P     PLE+GK 
Sbjct: 347 RCIPNLVIMTPSDENECRQMLYTGYHC-GKPAAVRYPRGNAVGVELEPLQ---PLELGKS 402

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ EG+++A+L +GT     L  +AL  +  L  TV D RF KPLD A I ++AK HE+
Sbjct: 403 KLIREGKKIAILNFGT-----LLPNALQVAEKLNTTVIDMRFVKPLDAARINAVAK-HEL 456

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EE ++ GG GS V + L         VK   L LPD +I  G+ ++ L +  L  +
Sbjct: 457 IVTLEENALQGGAGSAVAEVLNHQ---QHQVKLLQLGLPDFFIPQGTQSEMLTELKLDAA 513

Query: 540 HIAATVFNILGQ 551
            I   + N LG+
Sbjct: 514 GIEWQILNYLGE 525


>gi|398886803|ref|ZP_10641657.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM60]
 gi|398187958|gb|EJM75281.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM60]
          Length = 632

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/562 (45%), Positives = 355/562 (63%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAATDPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYNGPAAVRYPRGNGPNATIEKDLQ--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD  L+R +A +HE
Sbjct: 505 GVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEELVREIAGNHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDLYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMS 560
           + I A++       RE L++++
Sbjct: 617 AGIEASI-------RERLQLLA 631


>gi|398977332|ref|ZP_10687049.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM25]
 gi|398138076|gb|EJM27106.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM25]
          Length = 632

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/562 (46%), Positives = 352/562 (62%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MESLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P MV+M PSDE EL  M+ T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMVIMTPSDENELRKML-TTGHLYNGPAAVRYPRGTGPNATIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KP+D AL+R +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQMAEALKVAETLDA-----TVVDMRFVKPMDEALVREIANSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMS 560
             I A V       RE LE++S
Sbjct: 617 VGIEAAV-------RERLELLS 631


>gi|350551593|ref|ZP_08920807.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodospira sibirica
           ATCC 700588]
 gi|349796960|gb|EGZ50741.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodospira sibirica
           ATCC 700588]
          Length = 622

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/537 (48%), Positives = 345/537 (64%), Gaps = 26/537 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R   GLSGF KR ESEYD FG GHSSTSISA LGMA+    KG     VA+IGDGA
Sbjct: 93  MHTLRSRGGLSGFPKREESEYDSFGVGHSSTSISAALGMALAARQKGEARRSVAIIGDGA 152

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+N+AG   SD++VILNDN+    P          VGA+++ L+RL S    
Sbjct: 153 MTAGMAFEALNHAGGNKSDILVILNDNEMSISPN---------VGAMNNYLARLLSGPIY 203

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V   +  PM E   + +E+ +GMI     TLFEELG  Y GP+DGH++D L
Sbjct: 204 SNVREGSKRVLNHMP-PMREFMRRAEEHVKGMIVPG--TLFEELGFNYYGPIDGHDLDGL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           + +L  + + K  GP L+HVVT+KG+GY  AEK    YHGV KF+P  G   ++     +
Sbjct: 261 LKMLRNLHSLK--GPRLLHVVTQKGKGYTPAEKDPCTYHGVGKFNPDVGIDPQAKPVRPN 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L  +A+ D  +V I  AM  G+G+  F +RFP R  DVGIAEQHA+T AAG+
Sbjct: 319 YTEVFGQWLCDQAQADMRLVGITPAMREGSGMVAFSQRFPERYHDVGIAEQHALTLAAGM 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGLKP  AIYSSF+QRAYDQ+VHD+ LQ LPV  A+DRAG+VG DG TH G+ D++FM
Sbjct: 379 ACEGLKPVVAIYSSFLQRAYDQLVHDIALQNLPVLLAIDRAGVVGPDGATHAGNLDLSFM 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+MAP+DE E   M++T  A+ ++P+  RYPRG G G  + PG + +PL  G+ 
Sbjct: 439 RCVPNLVIMAPADENECRQMLSTGFAL-NQPAAVRYPRGCGPGTAMTPGLETLPL--GRA 495

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +G ++A+L +G  +   + ASA+ E+  L  TV + RF  PLD  L+  LA SHE+
Sbjct: 496 EIRRQGRKIAILAFGAPL---IEASAVAET--LDATVVNMRFVAPLDENLVLELAASHEL 550

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           L+TVE+  I GG GS V + LA       T     L LP+R+ +HGS  + L  AGL
Sbjct: 551 LVTVEDNVIAGGAGSAVAECLAHHA---QTTPLLLLGLPNRFQEHGSREELLQDAGL 604


>gi|317970000|ref|ZP_07971390.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. CB0205]
          Length = 635

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/560 (45%), Positives = 355/560 (63%), Gaps = 24/560 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES +D FG GH+STSISA LGMA+ RD +G     VAVIGDG+
Sbjct: 87  FHTLRQKDGVAGYLKRCESSFDHFGAGHASTSISAALGMALARDQRGDDLKSVAVIGDGS 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN  +S+         PPVGALS+ L+R++ +RP
Sbjct: 147 LTGGMALEAINHAGHLPKTRLLVVLNDN-DMSIS--------PPVGALSTHLNRMRHSRP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL---FEELGLYYIGPVDGHN 176
           L+ L++ A+   K +     EL  ++      M   +   L   FEELG  Y+GPVDGH+
Sbjct: 198 LQFLQDNAEEAIKHLPFMHGELPPELKNLKESMKRLAVPKLGAVFEELGFTYMGPVDGHD 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +  L+ + E+    +  GPVL+HV T KG+GY +AE     YH  + FD ATGK + SS 
Sbjct: 258 IAGLIDVFEQAHAHE--GPVLVHVATTKGKGYAFAEADQVGYHAQSAFDLATGKAYPSSK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  F + L+   E D  VV I AAM  GTGL+L  +  P + FDVGIAEQHAVT
Sbjct: 316 PKPPSYSKVFGQTLVKLCEQDPRVVGITAAMATGTGLDLLEKARPQQYFDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+ACEGL+P CAIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 MAAGMACEGLRPVCAIYSTFLQRAYDQLIHDVGIQNLPVTFVLDRAGIVGADGPTHQGQY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D++++ C+PN  VMAP DEAEL  M+ T       P+  R PRG G G   P   +G  P
Sbjct: 436 DISYLRCVPNFTVMAPKDEAELQRMMVTCLN-HSGPTALRIPRGEGEGA--PLMEEGWEP 492

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+G+G +L +G+ + ++ YG+ V   +A + LL+  G+R  V +ARF +PLD ALI  +
Sbjct: 493 LEIGRGELLTDGDDLLIVAYGSMVAPAMATAGLLQEQGVRAAVINARFLRPLDEALILPM 552

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFG+ VV+ L    +L   +    + +PD  +DH +PA     
Sbjct: 553 ARRIGKVVTMEEGCLAGGFGAAVVEILNDKDVL---LPVHRIGIPDVLVDHATPAQSKEA 609

Query: 534 AGLTPSHIAATVFNILGQTR 553
            GLTP  +  ++ +  G  +
Sbjct: 610 LGLTPVQMTESILDRFGTLK 629


>gi|398865852|ref|ZP_10621361.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM78]
 gi|398242301|gb|EJN27920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM78]
          Length = 632

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/563 (45%), Positives = 355/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SH+
Sbjct: 505 GVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAASHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A++       RE L++++ 
Sbjct: 617 AGIEASI-------RERLQLLNI 632


>gi|398874776|ref|ZP_10629976.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM74]
 gi|398193999|gb|EJM81084.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM74]
          Length = 632

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/563 (46%), Positives = 356/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SH+
Sbjct: 505 GIVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAGSHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A++       RE L++++ 
Sbjct: 617 AGIEASI-------RERLQLLNI 632


>gi|398858336|ref|ZP_10614028.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM79]
 gi|398239648|gb|EJN25355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM79]
          Length = 632

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/547 (47%), Positives = 347/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A VD  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAVDPRLVGITPAMKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QRAYDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRAYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PIAKDLEPIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVVRRQGNKVALLVFGVQLAEALKVAEKLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L++VEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVSVEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDTYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I   V
Sbjct: 617 AGIEEAV 623


>gi|422322211|ref|ZP_16403253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           C54]
 gi|317402860|gb|EFV83402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           C54]
          Length = 620

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/547 (47%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +AVIGDGA
Sbjct: 90  MAKLRQVGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   D +++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 150 MSAGMAFEAMNNAGVTADINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA + +E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAVLQHVP-PVLELARRFEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  +  G   +HVVT+KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLKALQ--GLQFLHVVTKKGQGYKLAEADPVLYHGPGKFDPAVGIQQSKAPGKR 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F++ L    + D  +VA+  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFSDWLCDMGQQDPRLVAVTPAMREGSGLVEFEKRFPQRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACE  KP  AIYS+F+QR YDQ++HDV LQ L V FA+DRAG+VGADG TH G++D  F
Sbjct: 376 VACEAQKPVLAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGIVGADGATHAGNYDTAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV  PSDE E   +++T       P+  RYPRG G G     G   +  E+G+
Sbjct: 436 LRCVPNMVVATPSDENETRLLLSTCYQYPG-PASVRYPRGAGCGAAETAGLDTV--ELGR 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  EG ++A+LG+GT +Q  LA +  L++     TVAD RF KP+D ALI  LA  H+
Sbjct: 493 GVVRREGRKIAILGFGTLLQPALAVAEKLDA-----TVADMRFVKPIDRALILDLASRHD 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+T+E+ +I GG GS V++ LA +G+   ++    L  PD +IDHG     LA  GL  
Sbjct: 548 ALVTIEDAAIMGGAGSAVLEVLAAEGV---SIPVLQLGFPDEFIDHGDQLALLAGIGLDA 604

Query: 539 SHIAATV 545
           + I  ++
Sbjct: 605 AGIEQSI 611


>gi|261867965|ref|YP_003255887.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|365967756|ref|YP_004949318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans ANH9381]
 gi|415768813|ref|ZP_11483967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-2]
 gi|416077118|ref|ZP_11585742.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype b str. SCC1398]
 gi|444346553|ref|ZP_21154517.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype c str. AAS4A]
 gi|261413297|gb|ACX82668.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|348004255|gb|EGY44778.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype b str. SCC1398]
 gi|348657659|gb|EGY75245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-2]
 gi|365746669|gb|AEW77574.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans ANH9381]
 gi|443541371|gb|ELT51798.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype c str. AAS4A]
          Length = 616

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/552 (46%), Positives = 356/552 (64%), Gaps = 28/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GL  F  R ESE+D    GHSSTSISAGLG+A+  + +      V VIGDGA
Sbjct: 91  MPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSISAGLGIAIAAERENAGRKTVCVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+RL S    
Sbjct: 151 ITAGMAFEALNHAGSLHTDMLVILNDN-EMSISEN--------VGALNNHLARLLSGSFY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K +   +  P+ E   K +E+ +G +S  GST+FEELG  YIGP+DGHNV++L
Sbjct: 202 SSLREGGKKILSGVP-PIKEFVKKTEEHVKGFVS-PGSTMFEELGFNYIGPIDGHNVEEL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           ++ L+ + + K  GP  +H+VT+KG+GY  AEK    +HGV KF+  +G+  KS+A T +
Sbjct: 260 ISTLQNMSSLK--GPQFLHIVTKKGKGYTPAEKDPIGFHGVPKFNHLSGELPKSNA-TPT 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFAAGL
Sbjct: 317 YSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVEFSQRFPQQYFDVAIAEQHAVTFAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 377 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGQTHQGAFDISFM 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+M PSDE E   M+ T      +P+  RYPRGN +GVEL P     PLE+GK 
Sbjct: 437 RCIPNLVIMTPSDENECRQMLYTGYHC-GKPAAVRYPRGNAVGVELEPLQ---PLELGKS 492

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ EG+++A+L +GT     L  +AL  +  L  TV D RF KPLD A I ++AK HE+
Sbjct: 493 KLIREGKKIAILNFGT-----LLPNALQVAEKLNATVIDMRFVKPLDAARINAVAK-HEL 546

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EE ++ GG GS V + L         VK   L LPD +I  G+ ++ L +  L  +
Sbjct: 547 IVTLEENALQGGAGSAVAEVLNHQ---QHQVKLLQLGLPDFFIPQGTQSEMLTELKLDAA 603

Query: 540 HIAATVFNILGQ 551
            I   + N LG+
Sbjct: 604 GIEWQILNYLGE 615


>gi|334119058|ref|ZP_08493145.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus vaginatus
           FGP-2]
 gi|333458529|gb|EGK87146.1| 1-deoxy-D-xylulose-5-phosphate synthase [Microcoleus vaginatus
           FGP-2]
          Length = 635

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/565 (44%), Positives = 355/565 (62%), Gaps = 25/565 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RDLKG     VAVIGDGA+
Sbjct: 88  HTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAALGMAMARDLKGENFKTVAVIGDGAL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG++  ++++V+LNDN+    P          VGA++  L++++ + P+
Sbjct: 148 TGGMALEAINHAGHMPKTNLLVVLNDNEMSISPN---------VGAITRYLNKMRLSPPV 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHN 176
           + L++  +   K I         +++    GM    +S  G+ + EELG  Y+GPVDGHN
Sbjct: 199 QFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRLAVSKVGAVI-EELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L+A  ++    +  GPVL+HVVT KG+GY  AEK    YH    F+ ATGK   S+ 
Sbjct: 258 LEELIATFKQAHTIQ--GPVLVHVVTVKGKGYAIAEKDQVGYHAQNPFNLATGKGLPSTK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  +Y+  FA AL+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPAYSKVFAHALVKLAEDNPKIVGITAAMATGTGLDKLHEKLPKQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            +AGLACEG++P  AIYS+F+QR YDQ++HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LSAGLACEGMRPVVAIYSTFVQRGYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGIP 414
           D++F+ CLPNM +MAP DEAEL  M+ T       P   RYPRGNG GV L   G + +P
Sbjct: 436 DISFLRCLPNMTIMAPKDEAELQRMIVTGINHTSGPITMRYPRGNGYGVPLMEEGWEELP 495

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GKG IL  G+ + +LGYG+ V   +  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 496 --IGKGEILRNGDDLLILGYGSMVYPAMQTAEILSEHGIEATVINARFVKPLDTELILPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEGS+ GGFGS V + L  + +L   V    L +PD  +DH +P    A 
Sbjct: 554 AQRIGRVVTLEEGSLMGGFGSAVAESLLDNNVL---VPLMRLGVPDTLVDHATPEQSFAS 610

Query: 534 AGLTPSHIAATVFNILGQTREALEI 558
            GLTP  +A  +     + +  + +
Sbjct: 611 LGLTPPQMADRILATFSRKQSPVSV 635


>gi|319943221|ref|ZP_08017504.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lautropia mirabilis ATCC
           51599]
 gi|319743763|gb|EFV96167.1| 1-deoxy-D-xylulose-5-phosphate synthase [Lautropia mirabilis ATCC
           51599]
          Length = 631

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/544 (47%), Positives = 352/544 (64%), Gaps = 33/544 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAV-----GRDLKGRKNNVVAV 55
           M T+RQ  GLSGF +R+ESEYD FG GHSSTSI+A +GMAV     G +    +   VAV
Sbjct: 97  MATLRQYQGLSGFPRRAESEYDTFGVGHSSTSIAAAMGMAVASRNLGENQGPERRRHVAV 156

Query: 56  IGDGAMTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRL 114
           IGDGAM+AG A+EA+NNAG + D D++VILNDN     P          VGA++  L+R+
Sbjct: 157 IGDGAMSAGMAFEALNNAGVMRDVDLLVILNDNDMSISPA---------VGAMNHYLARI 207

Query: 115 QSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDG 174
            S RPL + R+VA+ +   +  PM+ELA K++E+A+GM+  +  TLFEELG  Y GP+DG
Sbjct: 208 LSARPLVKARDVARQMLSVVP-PMYELARKLEEHAKGMLVPA--TLFEELGFTYFGPIDG 264

Query: 175 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 234
           H++D LV  L+ ++     GP+ +HV+T KG+GY  AE     YHG  KFDPA G +   
Sbjct: 265 HDLDALVPTLQNLREMH--GPLFLHVITRKGQGYKLAESDPVLYHGPGKFDPAEGIKRPL 322

Query: 235 SARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHA 293
           +  T+ +YT  F++ +   AEV+  +VA+  AM  G+GL  F +RFP R FDVGIAEQHA
Sbjct: 323 TPPTKPTYTQVFSDWVCDMAEVEPRLVAVTPAMREGSGLVEFEKRFPQRYFDVGIAEQHA 382

Query: 294 VTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG 353
           VTFAAG+AC+GL P  AIYS+F+QRAYDQ++HDV LQ LPV FA+DR+GLVGADG TH G
Sbjct: 383 VTFAAGMACDGLVPVVAIYSTFLQRAYDQLLHDVALQDLPVVFALDRSGLVGADGATHAG 442

Query: 354 SFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI 413
            +D  F+ C+PNMV+MAP+DE E   M+ +A      P   RYPRG G GV +      +
Sbjct: 443 VYDYAFLRCVPNMVIMAPADENECRQMLYSAVRY-HAPVAVRYPRGTGPGVLVQKEFTEL 501

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P   GK  +  +G+R+A+L +G+ V   + A   L++     TV + RF KP+D  LIR 
Sbjct: 502 PR--GKAEVRRQGKRIAILAFGSMVAPAMTAGEALDA-----TVVNMRFVKPIDADLIRE 554

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA +H+  +TVEE  + GG GS  ++ LA+ G+    ++   L LPDRYI+HG  A  L 
Sbjct: 555 LAATHDAFVTVEEHVVMGGAGSACLEVLAEAGIEKPVLQ---LGLPDRYIEHGEHALLLR 611

Query: 533 QAGL 536
             GL
Sbjct: 612 LEGL 615


>gi|398942445|ref|ZP_10670287.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp.
           GM41(2012)]
 gi|398160625|gb|EJM48890.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp.
           GM41(2012)]
          Length = 632

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/563 (46%), Positives = 354/563 (62%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAASDPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T    +  P+  RYPRG+G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLTTGHLFNG-PAAVRYPRGSGPNATIEKNLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDSYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A+V       RE L++++ 
Sbjct: 617 AGIEASV-------RERLQLLNI 632


>gi|254248387|ref|ZP_04941707.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
 gi|124874888|gb|EAY64878.1| Deoxyxylulose-5-phosphate synthase [Burkholderia cenocepacia PC184]
          Length = 639

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/543 (48%), Positives = 345/543 (63%), Gaps = 31/543 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSES YD FGT HSSTSISA LGMA    + G   + VAVIGDGA
Sbjct: 88  MKTLRQGGGISGFPRRSESPYDAFGTAHSSTSISAVLGMAHAARINGEARHCVAVIGDGA 147

Query: 61  MTAGQAYEAMNN-AGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           ++AG A+EAMNN AG  D  ++V+LNDN     PT         VGAL    ++L +NR 
Sbjct: 148 LSAGIAFEAMNNLAGCNDLRLLVVLNDNDMSISPT---------VGALRDCFAKLTANRF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           L   +  AK V + +  P+   A ++    +G++  +  TLFEE G  Y+GP+DGH++D 
Sbjct: 199 LNRRKADAKSVLQAMPAPLAGAAHRLKAQVKGVLLPA--TLFEEFGFNYVGPIDGHDLDA 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  LE ++  K  GP L+HV+T KGRGY  AEK    YHG  KFDP  G    S     
Sbjct: 257 LIPALETMRTLK--GPQLLHVITRKGRGYALAEKDPVLYHGPGKFDPDVGIVPPSPPGKP 314

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F   L  EAE D+ VVAI  AM  G+GL  F RRFP R FDVGIAEQHA+TFA G
Sbjct: 315 TYTQVFGNWLCDEAERDRRVVAITPAMREGSGLVDFERRFPDRYFDVGIAEQHAITFAGG 374

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +GLKP  AIYS+F+QR YDQ++HD+ +Q+LPV FA+DRAG+VGADG TH G+FD+ F
Sbjct: 375 LAADGLKPVVAIYSTFLQRGYDQLIHDIAIQRLPVTFAIDRAGIVGADGATHMGAFDIAF 434

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P++V+MAP+DE E   M+ TA    D P+  RYPRG G GV  PP  +  P+ +GK
Sbjct: 435 LRCIPDLVLMAPADENECRQMLHTALD-HDGPAAVRYPRGCGRGV--PPVREMQPIPIGK 491

Query: 420 GRIL-----IEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           G ++       G R+A+L +G+ V + L A   L++     TVA+ RF +PLD  L+R+L
Sbjct: 492 GAVIRTSSQPPGARIAILAFGSMVDATLKAGKQLDA-----TVANMRFIRPLDIDLVRTL 546

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A  H+VL+TVEEG + GG GS  ++ LA   +    +    L LPD++I+HG PA  LA 
Sbjct: 547 ADQHDVLVTVEEGCVAGGAGSACLEVLAAHRV---PIPVLQLGLPDQFIEHGDPAMLLAA 603

Query: 534 AGL 536
            GL
Sbjct: 604 CGL 606


>gi|378697712|ref|YP_005179670.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           10810]
 gi|301170228|emb|CBW29832.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Haemophilus influenzae 10810]
          Length = 620

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/553 (45%), Positives = 352/553 (63%), Gaps = 26/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV  + +      V VIGDGA
Sbjct: 91  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRKTVCVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 151 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSLY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D+L
Sbjct: 202 STLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNIDEL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++  +
Sbjct: 261 VATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP-T 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA GL
Sbjct: 318 YSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFATGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 378 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDISFM 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +GK 
Sbjct: 438 RCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIGKS 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H+ 
Sbjct: 494 RLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINMLAQTHDY 548

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL   
Sbjct: 549 LVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLDTK 605

Query: 540 HIAATVFNILGQT 552
            I   + + + +T
Sbjct: 606 GIEEKILSFIQKT 618


>gi|395797727|ref|ZP_10477015.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Ag1]
 gi|395338095|gb|EJF69948.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. Ag1]
          Length = 632

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/547 (46%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MATLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLNAPAAAPKKPSGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  VALL +G  +   L  +  +++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSGVALLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           S I A+V
Sbjct: 617 SGIEASV 623


>gi|17546940|ref|NP_520342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia solanacearum
           GMI1000]
 gi|21263512|sp|Q8XX95.1|DXS_RALSO RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|17429240|emb|CAD15928.1| probable 1-deoxy-d-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (dxp synthase)
           (dxps) protein [Ralstonia solanacearum GMI1000]
          Length = 636

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/554 (47%), Positives = 356/554 (64%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMALGAKTQGENRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y +  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS--------PPVGALNRYLARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPAAR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFEQRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VMAP+DE E   +++TA A  D P+  RYPRG G GV + P  + +P+
Sbjct: 436 DMAYLRCIPNMMVMAPADENECRQLLSTAFA-QDCPTAVRYPRGAGTGVVVQPTLEPLPV 494

Query: 416 ---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +      G+RV +L +G+ V    AA+  L++     TV + RF KPLD A + 
Sbjct: 495 GKAEVRRASTAPAGQRVVILAFGSMVAPAAAAAERLDA-----TVVNMRFVKPLDAACVL 549

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR++DHG  A  L
Sbjct: 550 EMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFVDHGDHAALL 606

Query: 532 AQAGLTPSHIAATV 545
           A  GL  + I A++
Sbjct: 607 ALCGLDANGILASI 620


>gi|387121992|ref|YP_006287875.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|415756050|ref|ZP_11480960.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-3]
 gi|416038199|ref|ZP_11574059.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. H5P1]
 gi|416048347|ref|ZP_11576288.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype d str. I63B]
 gi|416068223|ref|ZP_11582702.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype f str. D18P1]
 gi|429732220|ref|ZP_19266838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans Y4]
 gi|347993222|gb|EGY34598.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype d str. I63B]
 gi|347995141|gb|EGY36352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype a str. H5P1]
 gi|348001257|gb|EGY42008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans serotype f str. D18P1]
 gi|348655888|gb|EGY71314.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D17P-3]
 gi|385876484|gb|AFI88043.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|429156847|gb|EKX99467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aggregatibacter
           actinomycetemcomitans Y4]
          Length = 616

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/552 (46%), Positives = 357/552 (64%), Gaps = 28/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GL  F  R ESE+D    GHSSTSISAGLG+A+  + +      V VIGDGA
Sbjct: 91  MPTIRQKGGLHPFPWRGESEFDVLSVGHSSTSISAGLGIAIAAERENAGRKTVCVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+RL S    
Sbjct: 151 ITAGMAFEALNHAGSLHTDMLVILNDN-EMSISEN--------VGALNNHLARLLSGSFY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K +   +  P+ E   K +E+ +G++S  GST+FEELG  YIGP+DGHNV++L
Sbjct: 202 SSIREGGKKILSGVP-PIKEFVKKTEEHVKGLVS-PGSTMFEELGFNYIGPIDGHNVEEL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           ++ L+ + + K  GP  +H+VT+KG+GY  AEK    +HGV KF+  +G+  KS+A T +
Sbjct: 260 ISTLQNMSSLK--GPQFLHIVTKKGKGYTPAEKDPIGFHGVPKFNHLSGELPKSNA-TPT 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFAAGL
Sbjct: 317 YSKIFGDWLCEIAEQDPKLIGITPAMREGSGMVEFSQRFPQQYFDVAIAEQHAVTFAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 377 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGQTHQGAFDISFM 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+V+M PSDE E   M+ T      +P+  RYPRGN +GVEL P     PLE+GK 
Sbjct: 437 RCIPNLVIMTPSDENECRQMLYTGYHC-GKPAAVRYPRGNAVGVELEPLQ---PLELGKS 492

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ EG+++A+L +GT     L  +AL  +  L  TV D RF KPLD A I ++AK HE+
Sbjct: 493 KLIREGKKIAILNFGT-----LLPNALQVAEKLNATVIDMRFVKPLDAARINAVAK-HEL 546

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           ++T+EE ++ GG GS V + L         VK   L LPD +I  G+ ++ L +  L  +
Sbjct: 547 IVTLEENALQGGAGSAVAEVLNHQ---QHQVKLLQLGLPDFFIPQGTQSEMLTELKLDAA 603

Query: 540 HIAATVFNILGQ 551
            I   + N LG+
Sbjct: 604 GIEWQILNYLGE 615


>gi|359300541|ref|ZP_09186380.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus
           [parainfluenzae] CCUG 13788]
          Length = 619

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/549 (46%), Positives = 351/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DG+  F  R ES YD    GHSSTSISAGLG+AV    +      V VIGDGA
Sbjct: 92  IKTIRQKDGIHPFPWREESVYDVLSVGHSSTSISAGLGIAVAAQKENAGRQTVCVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+++ S    
Sbjct: 152 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLAQIFSGSLY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ +K V +++  P+     K +E+ +G+IS   STLFEELG  YIGPVDGHN+++L
Sbjct: 203 TTVRDGSKKVLEKVPSPIKNFMKKTEEHMKGVISPV-STLFEELGFNYIGPVDGHNIEEL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ ++  K  GP  +HV T+KG+GY  AE     YHGV KFDPA+G Q   +    +
Sbjct: 262 VKTLKNMRELK--GPQFLHVRTKKGKGYQPAENDPIGYHGVPKFDPASG-QLPKAKSIPT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFAAGL
Sbjct: 319 YSDIFGQWLCETAEQDTKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYSSF+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 379 AIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFM 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +M PSDE E+  M+ TA  + + P+  RYPRGN  GV L P      LE+GKG
Sbjct: 439 RCIPNMTIMTPSDENEMRQMLYTAYQM-NTPTAVRYPRGNAKGVALEPMES---LEIGKG 494

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ +GE+VA+L +GT +     A  + E+     T+AD RF KPLD ALI+ LA SH++
Sbjct: 495 KLIRQGEKVAILNFGTFLTE---AQKVAEAG--NYTLADMRFVKPLDEALIQELANSHDL 549

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG GS V ++L + G      K +PLV+   PD +I   +  +     GL
Sbjct: 550 LVTLEENAIQGGAGSAVNEYLQKIG------KIKPLVMLGIPDEFIPQSTQQEAYEALGL 603

Query: 537 TPSHIAATV 545
             + I   +
Sbjct: 604 DSAGIKQKI 612


>gi|85859631|ref|YP_461833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Syntrophus aciditrophicus
           SB]
 gi|118595622|sp|Q2LUA7.1|DXS_SYNAS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|85722722|gb|ABC77665.1| 1-deoxy-D-xylulose 5-phosphate synthase [Syntrophus aciditrophicus
           SB]
          Length = 650

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/559 (45%), Positives = 354/559 (63%), Gaps = 24/559 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  G+SGF KR ES YD F  GHSSTSISA  G+A  RDLK  +  VVA+IGDG+MT
Sbjct: 104 TLRQKGGISGFPKREESPYDVFNVGHSSTSISAASGIAEARDLKKERFKVVAIIGDGSMT 163

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+E +N +G    D+++ILNDN ++S+         P VGALSS L+ + + +   +
Sbjct: 164 AGLAFEGLNWSGDRKKDLVIILNDN-EMSIS--------PNVGALSSYLNHIMTGQTANK 214

Query: 123 LREVAKGVTK---QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           +R+  +   K    IG  + E + + +E  + +I      LFE+LG  Y+GP++GH +D 
Sbjct: 215 IRKDIRNFLKTIPSIGEQVLEFSRRAEESLKALIVPGA--LFEDLGFTYVGPLEGHRLDH 272

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART- 238
           L+  LE+V+N +  GPVL+HV+T KG+GY +AE    ++HG+  F P TGK   +S    
Sbjct: 273 LIRNLEDVRNME--GPVLVHVITRKGKGYKFAEAEPLRFHGICPFSPETGKPAAASESPV 330

Query: 239 -QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F   ++  A  +  +VAI AAM  GTGLN F   FP R FDVGIAEQH+VTFA
Sbjct: 331 PPSYTQVFGNTIVKLARQNPRLVAITAAMCEGTGLNAFAEEFPERFFDVGIAEQHSVTFA 390

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA EG+ P  AIYSSF+QRAYDQ++HDV LQ LPV FA+DRAG VG DGPTH G FD+
Sbjct: 391 AGLATEGILPVVAIYSSFLQRAYDQILHDVCLQNLPVVFALDRAGFVGEDGPTHHGLFDL 450

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +++  +PNMVVMAP DE EL HM+ TA A   +P+  RYPRG+G+GV +   ++   LE+
Sbjct: 451 SYLRSIPNMVVMAPKDENELQHMLHTAVAC-GKPAAVRYPRGSGVGVTM--DSQPFSLEL 507

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG +L EG  +A+L  G  V   L A+  L   G+  TV +ARF KPLD  L+  + +S
Sbjct: 508 GKGEVLCEGGSLAILAVGDPVHPALTAAVQLREEGIYATVVNARFVKPLDRELLLRIVRS 567

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
            + ++TVEE  + GGFGS +++FL ++ +    VK   L + D + +  + A+Q    G+
Sbjct: 568 FKKILTVEENVLTGGFGSAILEFLEENDIHGIQVKR--LGIRDEFAEQATQAEQRRLYGI 625

Query: 537 TPSHIAATVFNILGQTREA 555
               IAA V +++   R +
Sbjct: 626 DEQGIAAAVRSMMNMGRSS 644


>gi|398983679|ref|ZP_10690143.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM24]
 gi|399012338|ref|ZP_10714662.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM16]
 gi|398115900|gb|EJM05673.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM16]
 gi|398156851|gb|EJM45263.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM24]
          Length = 632

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/548 (46%), Positives = 351/548 (64%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MESLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A VD  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSAVFGEWLCDMAAVDPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVG 418
           + C+P MV+M PSDE EL  M+ T   + + P+  RYPRGNG    +    K + P+E+G
Sbjct: 448 LRCIPGMVIMTPSDENELRKML-TTGHLYNGPAAVRYPRGNGPNATI---EKDLDPIEIG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SH
Sbjct: 504 KGILRRQGSKVALLVFGVQLAEALKVAEKLDA-----TVVDMRFVKPLDEALVREIADSH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL 
Sbjct: 559 ELLVTIEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLD 615

Query: 538 PSHIAATV 545
            + I A++
Sbjct: 616 EAGIEASI 623


>gi|319776298|ref|YP_004138786.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           F3047]
 gi|317450889|emb|CBY87114.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           F3047]
          Length = 621

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/552 (45%), Positives = 351/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV  + +      V VIGDGA
Sbjct: 91  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRKTVCVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 151 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSLY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D+L
Sbjct: 202 STLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNIDEL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++  +
Sbjct: 261 VATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP-T 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA GL
Sbjct: 318 YSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFATGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 378 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDISFM 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +GK 
Sbjct: 438 RCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIGKS 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H+ 
Sbjct: 494 RLIRKGQKIAILNFGT-----LLPSALELSEKLNPTVVDMRFVKPIDIEMINMLAQTHDY 548

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL   
Sbjct: 549 LVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLDTK 605

Query: 540 HIAATVFNILGQ 551
            I   + N + +
Sbjct: 606 GIEEKILNFIAK 617


>gi|95928788|ref|ZP_01311534.1| deoxyxylulose-5-phosphate synthase [Desulfuromonas acetoxidans DSM
           684]
 gi|95135133|gb|EAT16786.1| deoxyxylulose-5-phosphate synthase [Desulfuromonas acetoxidans DSM
           684]
          Length = 625

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/541 (47%), Positives = 344/541 (63%), Gaps = 25/541 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            +T+RQ DG+SGF KR ES +DCF  GHSSTSISA LGMAVGRD K   N VVAVIGDG+
Sbjct: 89  FNTLRQLDGISGFPKRKESPHDCFDVGHSSTSISAALGMAVGRDCKELNNKVVAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG+LD +MI+ILNDN ++S+         P VGALSS LSR  ++R  
Sbjct: 149 LTAGLAFEALNHAGHLDRNMIIILNDN-EMSIS--------PNVGALSSFLSRKMTSRLF 199

Query: 121 ----RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
               RE     K V +  G  + +LA + ++  +  ++     LFE  G+ Y+GP+DGH+
Sbjct: 200 VRFKRETEIFLKSVPR-FGKDLVQLAKRTEDSFKAFVTPG--MLFEAFGIEYVGPIDGHS 256

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +D+L+  L+ V  ++  GP LIHVVT KG+GY  AE     +HGV  FD  +GK   ++ 
Sbjct: 257 MDELIETLQNV--SRLDGPSLIHVVTRKGKGYQPAEDNPALFHGVGPFDKTSGKVKTTTG 314

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              SYT+ F E L   AE D  +VAI AAM  GTGL  F  RFP R FDVGIAEQHAVT 
Sbjct: 315 APPSYTSVFGEYLCQLAEKDSRLVAITAAMCTGTGLVPFAERFPKRFFDVGIAEQHAVTL 374

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+ACE L+P  AIYS+F+QRAYD V+HDV LQ LPV FA+DR GLVGADGPTH G FD
Sbjct: 375 AAGMACEELRPVVAIYSTFLQRAYDNVLHDVCLQNLPVTFALDRGGLVGADGPTHHGVFD 434

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           ++++  +PN+ V  P DE EL   + TA    D P  +RYPRGNG+G++     K  PL 
Sbjct: 435 LSYLRHIPNVTVAVPRDELELKRAMLTATT-SDGPFVYRYPRGNGLGLQQTDDFK--PLT 491

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G+G  L EG+   L+  GT  ++ +  +  L   G+ + V DARF KPLD  L+ + A+
Sbjct: 492 IGQGEKLREGQAATLVSIGTFAETAMDVAVKLSEKGIEIAVVDARFLKPLDQELLIAEAR 551

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
               +IT+EE  + GGFGS V++ + ++ L    ++   L LPD +I  GS  + L   G
Sbjct: 552 RTGNIITLEENVLAGGFGSAVMELMEKNRLYPRVMR---LGLPDEFIQQGSHDELLKLHG 608

Query: 536 L 536
           L
Sbjct: 609 L 609


>gi|145334377|ref|NP_001078570.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
 gi|110742752|dbj|BAE99284.1| 1-D-deoxyxylulose 5-phosphate synthase - like protein [Arabidopsis
           thaliana]
 gi|332004287|gb|AED91670.1| 1-deoxy-D-xylulose 5-phosphate synthase 3 [Arabidopsis thaliana]
          Length = 565

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/412 (56%), Positives = 294/412 (71%), Gaps = 23/412 (5%)

Query: 5   RQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAG 64
           RQ  G+SG T R ESEYD FGTGH   SISAGLG+AV RD+KG+++ VVAVI +  +TAG
Sbjct: 166 RQNSGISGVTSRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAG 225

Query: 65  QAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELR 124
           QAYEAM+NAGYLDS+MIVILND++  SL     +G    + ALSS +S++QS++  R+ R
Sbjct: 226 QAYEAMSNAGYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFR 284

Query: 125 EVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAIL 184
           E+AK +TK+IG  M+E AAKVDEYARGM+  +GSTLFEELGLYYIGPVDGHN++DLV +L
Sbjct: 285 ELAKAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEELGLYYIGPVDGHNIEDLVCVL 344

Query: 185 EEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTY 244
            EV +  + GPVL+HV+TE  R                  D  T K      R ++Y+  
Sbjct: 345 REVSSLDSMGPVLVHVITEGNR------------------DAETVKNIMVKDR-RTYSDC 385

Query: 245 FAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEG 304
           F EAL+ EAE D+D+V +HA M     L  F  RFP R F+VG+AEQHAVTF+AGL+  G
Sbjct: 386 FVEALVMEAEKDRDIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHAVTFSAGLSSGG 445

Query: 305 LKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLP 364
           LKPFC I S+F+QRAYDQVVHDVD Q+  VRF +  AGLVG+DGP  CG+FD+ FM+ LP
Sbjct: 446 LKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCGAFDIAFMSSLP 505

Query: 365 NMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVE-LPPGNKGIPL 415
           NM+ MAP+DE EL +MVATAA + DRP CFR+PRG+ + +  L P   G+P+
Sbjct: 506 NMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNMNYLVP--TGLPI 555


>gi|419955643|ref|ZP_14471768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri TS44]
 gi|387967556|gb|EIK51856.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri TS44]
          Length = 632

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/556 (45%), Positives = 348/556 (62%), Gaps = 26/556 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +RSESEYD FG GHSSTSI A LGMA+   LKG K   +AVIGDGA
Sbjct: 102 MSTLRQKDGLAAFPRRSESEYDTFGVGHSSTSIGAALGMAIAARLKGEKRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG +S+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGMSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPAKPKQPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYPDRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    +  G +  PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYLFEG-PAAVRYPRGSGPNATIEAGLE--PLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G+R ALL +G  +   L     L++     TV D RF KPLD AL+R LA  H +
Sbjct: 505 VVRRQGKRAALLVFGVQLPEALQVGEALDA-----TVVDMRFVKPLDEALLRRLAAEHAL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVEE SI GG GS V +FLA + ++   +    L LPD Y++H  P++ LA+ GL  +
Sbjct: 560 LVTVEENSIMGGAGSAVAEFLAAEAVVMPLLH---LGLPDSYVEHAKPSEMLAECGLDAA 616

Query: 540 HIAATVFNILGQTREA 555
            I A V   L    EA
Sbjct: 617 GIEAAVRQRLAALGEA 632


>gi|421139008|ref|ZP_15599054.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BBc6R8]
 gi|404509731|gb|EKA23655.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BBc6R8]
          Length = 632

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/547 (46%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MATLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLNAPAAAPKKPSGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMASADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  VALL +G  +   L  +  +++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSGVALLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTLEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           S I A+V
Sbjct: 617 SGIEASV 623


>gi|114563955|ref|YP_751469.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella frigidimarina
           NCIMB 400]
 gi|122299142|sp|Q07ZD4.1|DXS_SHEFN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|114335248|gb|ABI72630.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Shewanella frigidimarina
           NCIMB 400]
          Length = 621

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/547 (45%), Positives = 352/547 (64%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ +GL  F  R ES YD F  GHS TS+SA LGMA+    +G    VVAVIGDGA
Sbjct: 95  MHTIRQKNGLHPFPWREESPYDTFSVGHSGTSVSAALGMAIAAGKEGVGRKVVAVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G  +EA+N+AG L +DM+V+LNDN ++S+           VGAL++ L++L S R  
Sbjct: 155 MTGGMVFEALNHAGDLHNDMLVVLNDN-EMSISEN--------VGALNNHLAQLMSGRFY 205

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             +RE +K V K  G P + E+A + +E+ +GM+  +  TLFEELG  YIGP+DGH+VD 
Sbjct: 206 TTIRENSKKVLK--GMPVIKEMAKRTEEHLKGMVVPA--TLFEELGFNYIGPIDGHDVDS 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  +  ++N K  GP ++H++T+KGRGY  AEK    +H V KFDP+  K+  +     
Sbjct: 262 LVETMRNMRNLK--GPQILHIMTKKGRGYEPAEKDPIGWHAVPKFDPSQFKKPTTKPGLP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +++  F + L   A  D  +VAI  AM  G+G+  F +RFP++ FD  IAEQHAVT AAG
Sbjct: 320 TFSQVFGKWLCDMAATDDKLVAITPAMREGSGMVEFSQRFPSQYFDAAIAEQHAVTLAAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
            AC GLKP  AIYS+F+QR YDQ++HDV LQ+LPV FA+DR G+VGADGPTH G+FD++F
Sbjct: 380 FACAGLKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSF 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM++MAPSDE E   M+ T     D P+  RYPRG   G E       IP  +GK
Sbjct: 440 MRCIPNMIIMAPSDENECRQMLYTGYCYQDGPTAVRYPRGFATGAEQIDTMTMIP--IGK 497

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G+++A++ +GT +++   A+  L++     T+AD RF KPLD  L+  LA SH+
Sbjct: 498 GVLTRQGQKIAIVNFGTTLEAATDAAEKLDA-----TIADMRFVKPLDLGLLEQLANSHD 552

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           V++TVEE +I GG GS V++ L +  ++   ++   + LPD +I HG+P +  A+  L  
Sbjct: 553 VIVTVEENAIMGGAGSGVIEALHKMRIVKPVLQ---IGLPDEFIKHGAPDEITAELQLDA 609

Query: 539 SHIAATV 545
             I A +
Sbjct: 610 QGILAQI 616


>gi|163857372|ref|YP_001631670.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella petrii DSM
           12804]
 gi|229813262|sp|A9ITB0.1|DXS_BORPD RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|163261100|emb|CAP43402.1| 1-deoxy-D-xylulose 5-phosphate synthase [Bordetella petrii]
          Length = 627

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/547 (49%), Positives = 356/547 (65%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +AVIGDGA
Sbjct: 90  MASLRQEGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGIQRQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   D +++V+LNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 150 MSAGMAFEAMNNAGVTPDINLLVVLNDN-DMSIS--------PPVGALNRYLARLMSGRF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + + + +  P+ ELA + +E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAMLQHVP-PVLELARRFEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  +  G   +HVVT KG GY  AE     YHG  KFDPA G Q   ++  +
Sbjct: 258 LVPTLQNLKALQ--GLQFLHVVTRKGHGYKLAEADPVLYHGPGKFDPAVGIQQGKASTRK 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F + L   AE D+ +V I  AM  G+GL  F RRFP R FDVGIAEQHAVTFAAG
Sbjct: 316 TFTQVFGQWLCDMAERDERLVGITPAMREGSGLVEFERRFPRRYFDVGIAEQHAVTFAAG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QR YDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ +
Sbjct: 376 LACEGQKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAY 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV APSDE E   +++T       P+  RYPRG G G E+ PG   +P+  GK
Sbjct: 436 LRCVPNMVVAAPSDENEARLLLSTCYEYPG-PASVRYPRGAGRGAEISPGLDTVPM--GK 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  +A+L +GT  Q+ LAA+  L++     TVAD RF KP+D  LI  LA  H+
Sbjct: 493 GIVRRQGRGIAILAFGTLTQAALAAAEALDA-----TVADMRFVKPIDRELILQLAAGHD 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            ++TVEE +I GG GS V++ L  +G++   V    L LPDR+IDHG  A  LA  GL  
Sbjct: 548 AIVTVEEAAIMGGAGSAVIEVLHHEGVV---VPVLQLGLPDRFIDHGDQAALLAGLGLDA 604

Query: 539 SHIAATV 545
           + I  ++
Sbjct: 605 AGIERSI 611


>gi|421152011|ref|ZP_15611603.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 14886]
 gi|404526143|gb|EKA36375.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas aeruginosa
           ATCC 14886]
          Length = 627

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/546 (47%), Positives = 354/546 (64%), Gaps = 28/546 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +GL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+G++   VAVIGDGA
Sbjct: 102 MGTLRQKNGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGKERKSVAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A   D+DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHASEGDADMLVILNDN-DMSISHN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  +++ K  GP  +HVVT+KG+G+  AE     YH + K + A G   K +   + 
Sbjct: 270 VATLRNMRDMK--GPQFLHVVTKKGKGFAPAELDPIGYHAITKLE-APGSAPKKTGGPK- 325

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y++ F + L   A  D  ++ I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 326 YSSVFGQWLCDMAAQDARLLGITPAMKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGM 385

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 386 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDISYL 445

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  ++ T    D  P+  RYPRG+G    + P  +  P+E+GKG
Sbjct: 446 RCIPGMLVMTPSDEDELRKLLTTGYLFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKG 502

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +   G R+ALL +G  +     A A+  +  L  TV D RF KPLD AL+R LA SHE+
Sbjct: 503 VVRRRGGRIALLVFGVQL-----AEAMKVAESLDATVVDMRFVKPLDEALVRELAGSHEL 557

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE ++ GG GS V +FLA +GL    V    L LPD Y++H  P++ LA+ GL  +
Sbjct: 558 LVTIEENAVMGGAGSAVGEFLASEGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAA 614

Query: 540 HIAATV 545
            I   V
Sbjct: 615 GIEKAV 620


>gi|344940448|ref|ZP_08779736.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacter
           tundripaludum SV96]
 gi|344261640|gb|EGW21911.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylobacter
           tundripaludum SV96]
          Length = 620

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/547 (47%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+R  DG+S F  R+ESEYD FG GHSSTSISA LGMA+  +LKG    +VA+IGDG+
Sbjct: 94  MTTIRTKDGVSAFPSRAESEYDAFGVGHSSTSISAALGMAIASELKGEDKKMVAIIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G A+EAMN+AG LD++++VILNDN  +S+         PPVGA+++ L+++ S++  
Sbjct: 154 ITGGMAFEAMNHAGALDANLLVILNDN-DMSIS--------PPVGAMNNYLTKILSSKFY 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K     +   + ELA + +E+ +GM+     TLFEELG  YIGP+DGH++D L
Sbjct: 205 SSMREGSKKALSSMPS-VWELARRTEEHMKGMVVPG--TLFEELGFNYIGPIDGHDIDML 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ- 239
           V+ LE +K+   TGP  +H+VT+KG+GYP AEK    YHGV  FDP+     KS+     
Sbjct: 262 VSTLENLKHI--TGPRFLHIVTQKGKGYPPAEKDPLAYHGVPAFDPSKDCLPKSAPSPHP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F E L   A  D+ ++ I  AM  G+GL  F + +P R FDV IAEQHAVT AAG
Sbjct: 320 TYTEVFGEWLCDMAAKDERLLGITPAMREGSGLVKFSQCYPRRYFDVAIAEQHAVTLAAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
            AC+G KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD ++
Sbjct: 380 QACQGAKPVVAIYSTFLQRAYDQMIHDVAIQNLDVLFALDRAGLVGPDGPTHAGSFDYSY 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNM+VMAP+DE E   M+ T   + + P+  RYPRG G GV +      +PL  GK
Sbjct: 440 MRCIPNMLVMAPADENECRQMLYT-GFMHEGPASVRYPRGKGPGVAVDKTMTALPL--GK 496

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
             +  +G R+A+L +G+ V   + A   L +     TV + RF KP+D  L+  LAKSHE
Sbjct: 497 AEVRHQGSRIAILAWGSMVTPAMEAGKQLGA-----TVVNMRFVKPIDTELVLELAKSHE 551

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           VLITVEE  + GG GS V  FL    +L   +    + LPD +++ G+  + LA  GL  
Sbjct: 552 VLITVEENVLAGGAGSAVNDFLQAQQILMPVLN---IGLPDSFVEQGTREELLALCGLDI 608

Query: 539 SHIAATV 545
             I A V
Sbjct: 609 QGILAKV 615


>gi|68250029|ref|YP_249141.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           86-028NP]
 gi|81335547|sp|Q4QKG6.1|DXS_HAEI8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|68058228|gb|AAX88481.1| 1-deoxy-D-xylulose 5-phosphate synthase [Haemophilus influenzae
           86-028NP]
          Length = 625

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/554 (46%), Positives = 354/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 LYSTLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA+L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++ 
Sbjct: 263 ELVAMLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQH VTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHTVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDIS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATRQEALADLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 TKGIEEKILNFIAK 621


>gi|390453367|ref|ZP_10238895.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paenibacillus peoriae KCTC
           3763]
          Length = 632

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/540 (46%), Positives = 347/540 (64%), Gaps = 24/540 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ DGL GF KRSESE+D +  GHSSTS+SA +GMA+ RDLKG  N V+AVIGDGA+T
Sbjct: 89  TLRQRDGLCGFVKRSESEHDVWEAGHSSTSLSAAMGMALARDLKGEDNKVIAVIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+EA+N+ G+   +++VILNDN ++S+         P VGA+ + LS+++S+R    
Sbjct: 149 GGMAFEALNHIGHERKNLMVILNDN-EMSIA--------PNVGAMHNYLSKIRSDRHYLR 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++  + + K+I   GG + + A +V D +   M+ G    LFEELGL Y+GPVDGH++ 
Sbjct: 200 AKDELEVLLKKIPAIGGKLAKSAGRVKDSFKYMMVPG---VLFEELGLTYLGPVDGHDLP 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+   ++  N   TGPVL+HVVT KG+GY  AE  + K+HG++ +   +G+  K+    
Sbjct: 257 KLIETFQQADNV--TGPVLVHVVTTKGKGYKPAEADSHKWHGISPYKIESGQVLKAVGNP 314

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
             YT  F   LI  AE D+ ++A+  AM GG+GL  F   F TR  DVGIAEQHA T  A
Sbjct: 315 M-YTEIFGRTLIELAEQDERIIAVTPAMPGGSGLVPFSEEFSTRMIDVGIAEQHAATMCA 373

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
            LA EGLKP  A+YS+FMQRAYDQ+VHD+      V FA+DRAG VGADG TH G FDV 
Sbjct: 374 ALAMEGLKPIFAVYSTFMQRAYDQIVHDICRHNANVMFAIDRAGFVGADGETHHGVFDVA 433

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  +PN+V+M P DE EL HM+ TA   DD P  +RYPR N +GV L    K IP  +G
Sbjct: 434 FLRHIPNLVLMMPKDENELRHMMKTALDYDDGPIAYRYPRVNVVGVPLDSELKAIP--IG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              +L +GE  A++  G  +Q    A+  ++  GL+++V +ARF KP+D  ++R LA+ H
Sbjct: 492 SWELLRKGEGYAVIASGPMLQVAAEAAEAMKREGLQVSVVNARFLKPVDEEMLRELARQH 551

Query: 479 EVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             LI +EE S  G  GS V++F A + +L+  V  R + +PDR+++HGS  +Q A+ GLT
Sbjct: 552 TKLIVLEEASEAGSLGSAVLEFYANEEILNAQV--RLMGIPDRFVEHGSIKEQRAEVGLT 609


>gi|423016478|ref|ZP_17007199.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           AXX-A]
 gi|338780420|gb|EGP44828.1| 1-deoxy-D-xylulose-5-phosphate synthase [Achromobacter xylosoxidans
           AXX-A]
          Length = 620

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/547 (47%), Positives = 348/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G +   +AVIGDGA
Sbjct: 90  MAKLRQLGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVQRQHIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 150 MSAGMAFEAMNNAGVTANINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 200

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA + +E+A+GM++ +  TLFEE G  Y+GP+DGH++D 
Sbjct: 201 YAAAKNVGRAVLQHVP-PVLELARRFEEHAKGMVTPA--TLFEEFGFNYVGPIDGHDLDA 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  L+ +K  +  G   +HVVT+KG+GY  AE     YHG  KFDPA G Q   +   +
Sbjct: 258 LVPTLQNLKALQ--GLQFLHVVTKKGQGYKLAEADPVLYHGPGKFDPAVGIQQSKAPGKR 315

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F++ L    E D  +VA+  AM  G+GL  F +RFP R FDVGIAEQHAVTFA G
Sbjct: 316 TFTQVFSDWLCEMGEQDSRLVAVTPAMREGSGLVEFEKRFPQRYFDVGIAEQHAVTFAGG 375

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACE  KP  AIYS+F+QR YDQ++HDV LQ L V FA+DRAG+VGADG TH G++D  F
Sbjct: 376 IACEAQKPVLAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGIVGADGATHAGNYDTAF 435

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV  PSDE E   +++T       P+  RYPRG G G     G   +  E+G+
Sbjct: 436 LRCVPNMVVATPSDENETRLLLSTCYQYPG-PASVRYPRGAGCGAAETAGLGTV--ELGR 492

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  EG ++A+LG+GT VQ  LA +  L++     TVAD RF KP+D ALI  LA  H+
Sbjct: 493 GVVRREGRKIAILGFGTLVQPALAVAEKLDA-----TVADMRFVKPIDRALILDLASRHD 547

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+T+E+ +I GG GS V++ LA +G+    +    L  PD +IDHG     LA  GL  
Sbjct: 548 ALVTIEDAAIMGGAGSAVLEVLAAEGI---AIPVLQLGFPDEFIDHGDQLALLAGIGLDA 604

Query: 539 SHIAATV 545
           + I  ++
Sbjct: 605 AGIEQSI 611


>gi|404496791|ref|YP_006720897.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|418065258|ref|ZP_12702632.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
 gi|118595481|sp|Q39UB1.1|DXS1_GEOMG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase 1; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase 1; Short=DXP
           synthase 1; Short=DXPS 1
 gi|78194396|gb|ABB32163.1| 1-deoxy-D-xylulose-5-phosphate synthase [Geobacter metallireducens
           GS-15]
 gi|373562436|gb|EHP88647.1| deoxyxylulose-5-phosphate synthase [Geobacter metallireducens RCH3]
          Length = 625

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/547 (49%), Positives = 348/547 (63%), Gaps = 22/547 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+R   G+SGF KR ES +D F TGH+STSISA LG AV RDL+G +N VVAVIGDG+MT
Sbjct: 91  TLRTLGGISGFPKRCESSHDAFDTGHTSTSISAALGFAVARDLRGERNKVVAVIGDGSMT 150

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G AYE +NNAG+L+ D++V+LNDN ++S+           VGALS+ L+R  ++  +  
Sbjct: 151 GGLAYEGLNNAGHLNKDLVVVLNDN-EMSIAEN--------VGALSNFLNRTVTSEFVHT 201

Query: 123 LREVAKGVT---KQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           +++  +G      +IG  + ++A + +E  +G+ +     LFE  G  YIGP+DGH+   
Sbjct: 202 MKKDLEGFLGGLDRIGHGVLKVAKRAEESLKGLFTPG--MLFEAFGFEYIGPIDGHDTAR 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+   E+VK  +    VLIHV+T+KGRGYP AE+    +HGV  F+  TGK  K      
Sbjct: 260 LMETFEKVK--RFDDAVLIHVLTKKGRGYPPAEEKPALFHGVGPFELETGKVIKGKGGAA 317

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F EA+   A  D+ V+A+ AAM  GTGL  F   +PTR FDVGIAEQH VTFAAG
Sbjct: 318 SYTGVFGEAIRKIAAEDERVIALTAAMPDGTGLTPFAADYPTRFFDVGIAEQHGVTFAAG 377

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA EG +P  A+YSSF+QRAYDQV HDV LQ LPV FA+DRAG+VG+DGPTH G FD+ +
Sbjct: 378 LAAEGYRPVFAVYSSFLQRAYDQVFHDVCLQNLPVTFAIDRAGVVGSDGPTHHGLFDLAY 437

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LPNMVVMAP DE EL H++ TA    D P+  RYPRGNG GV L      +P  +GK
Sbjct: 438 LRHLPNMVVMAPKDENELQHLLLTAIE-HDGPAAVRYPRGNGYGVSLDQTCSVLP--IGK 494

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G IL EG   ALL  G+ V     A+  L + G+ L V +ARF KPLD  LI SLA++  
Sbjct: 495 GEILREGLDGALLAIGSTVYPAREAAEALAAEGIDLAVVNARFVKPLDRDLILSLARTTG 554

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            LI VEE  I GGFG+ V++ L ++G+    VK   L  PDRY++ G   +  AQ GL  
Sbjct: 555 RLIIVEENVIQGGFGTAVLELLEEEGI--NGVKVLRLGYPDRYVEQGEQHELRAQYGLDA 612

Query: 539 SHIAATV 545
             I A V
Sbjct: 613 PGITARV 619


>gi|297569006|ref|YP_003690350.1| deoxyxylulose-5-phosphate synthase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924921|gb|ADH85731.1| deoxyxylulose-5-phosphate synthase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 636

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/534 (48%), Positives = 339/534 (63%), Gaps = 22/534 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  G+SGF KR ESE+D F TGHSSTSISA LGMA G +LKG  N  +AVIGDG+MT
Sbjct: 105 TLRQFGGISGFPKREESEFDHFDTGHSSTSISAALGMAAGTELKGENNKTIAVIGDGSMT 164

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+E +N AG+L  ++IVILNDN+    P          VGALSS LSR  + R +  
Sbjct: 165 GGLAFEGLNQAGHLGKNLIVILNDNEMSISPN---------VGALSSFLSRKLTGRTMVR 215

Query: 123 LREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           +++  + + K  Q+G  + +L  + +E  +G  +     LFE L   YIGP+ GH++D L
Sbjct: 216 IKKELEHLLKNFQMGENVLQLLKRSEESLKGFFTPG--MLFEALKFEYIGPIPGHHLDSL 273

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +     V++  + GPVLIHV+T KG+GYP AE+    +HGV  F+ ATGK F +     S
Sbjct: 274 LETFRNVRDF-SQGPVLIHVITTKGKGYPPAEERPGDFHGVGPFEVATGKPFATEG-PPS 331

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F + L+  A+ D  + AI AAM  GTGLN F   FP R FDVGIAEQHA TFAAGL
Sbjct: 332 YTKVFGDTLVELAQQDPRICAITAAMPSGTGLNRFAAEFPDRFFDVGIAEQHAATFAAGL 391

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEGL+P  A+YS+F+QRA+DQVVHD+ L +LPV FA+DR G+VG DGPTH G FD++F+
Sbjct: 392 ACEGLRPVVAVYSTFLQRAFDQVVHDICLPELPVIFAIDRGGVVGDDGPTHHGVFDLSFL 451

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
             +PN+++MAP DE EL +M+ TA      P   RYPRG G+GV L P  + IP   GKG
Sbjct: 452 RIIPNLILMAPKDENELRNMLFTALQ-SPEPVAIRYPRGAGLGVTLAPELQKIPF--GKG 508

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +L EG  V LL  G  V + L A+A L   G+   V + RF KPLD  LI   A     
Sbjct: 509 ELLQEGSDVLLLPVGNRVATALEAAAGLAKTGVSAAVINPRFVKPLDGDLICQWAGKTGR 568

Query: 481 LITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           ++TVE+    GGFGS V++ L + GL    VK + L LPDR+++HGS   QL Q
Sbjct: 569 VVTVEDNVRAGGFGSAVLELLQRRGL--AGVKVKTLGLPDRFLEHGS-QQQLWQ 619


>gi|229592838|ref|YP_002874957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SBW25]
 gi|259645387|sp|C3K2R1.1|DXS_PSEFS RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229364704|emb|CAY52664.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SBW25]
          Length = 632

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/547 (46%), Positives = 349/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 102 MGTLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K DP           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLDPLNAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G + A L +G  +   L  +  +++     TV D RF KPLD AL+R +A  HE
Sbjct: 505 GIVRRQGSKTAFLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAGGHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I A+V
Sbjct: 617 AGIEASV 623


>gi|145638944|ref|ZP_01794552.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|145271916|gb|EDK11825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittII]
 gi|309750913|gb|ADO80897.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2866]
          Length = 625

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/554 (46%), Positives = 354/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D
Sbjct: 204 LYSTLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++ 
Sbjct: 263 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDIS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+ C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +G
Sbjct: 440 FIRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 TKGIEEKILNFIAK 621


>gi|260583061|ref|ZP_05850843.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           NT127]
 gi|260093912|gb|EEW77818.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           NT127]
          Length = 625

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/554 (46%), Positives = 354/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V VIGD
Sbjct: 95  MSTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCVIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN++
Sbjct: 204 LYSTLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNIE 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++ 
Sbjct: 263 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDLS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ +G+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIRKGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEILNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 TKGIEEKILNFIAK 621


>gi|6249535|emb|CAB60078.1| 1-deoxy-xylulose 5-phosphate synthase [Synechococcus elongatus PCC
           6301]
          Length = 636

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/557 (45%), Positives = 350/557 (62%), Gaps = 24/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR+E+ +D FG GH+STSISAGLGMA+ RD +G     VAVIGDG+
Sbjct: 87  FHTLRQKDGIAGYPKRTENRFDHFGAGHASTSISAGLGMALARDAQGEDYRCVAVIGDGS 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN     P          VGALS  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTRLLVVLNDNDMSISPN---------VGALSRYLNKIRVSEP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L +      +QI   GG + +    V E  + +       +FEELG  Y+GPVDGHN
Sbjct: 198 MQLLTDGLTQGMQQIPFVGGAITQGFEPVKEGMKRLSYSKIGAVFEELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSS 235
           +++L+A   E    K TGPVL+HV T KG+GYPYAE+    YH    FD ATGK +  S 
Sbjct: 258 LEELIATFREAH--KHTGPVLVHVATTKGKGYPYAEEDQVGYHAQNPFDLATGKAKPASK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  F + L   A+ D+ +V I AAM  GTGL++  +  P +  DVGIAEQHAV 
Sbjct: 316 PKPPSYSKVFGQTLTTLAKSDRRIVGITAAMATGTGLDILQKALPKQYIDVGIAEQHAVV 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+AC+G++P  AIYS+F+QRA+DQV+HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGMACDGMRPVVAIYSTFLQRAFDQVIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP-PGNKGIP 414
           D+ ++  +PNMV+MAP DEAEL  M+ T    D  P   R+PRGNGIGV LP  G + +P
Sbjct: 436 DIAYLRLIPNMVLMAPKDEAELQRMLVTGIEYDG-PIAMRFPRGNGIGVPLPEEGWESLP 494

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GK   L +G+ + +L YG+ V   L  + LL  +G+  TV +ARF KPLD  LI  L
Sbjct: 495 --IGKAEQLRQGDDLLMLAYGSMVYPALQTAELLNEHGISATVINARFAKPLDEELIVPL 552

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T EEG + GGFGS +++ L    L    V   P+ +PD  ++H SP +   +
Sbjct: 553 ARQIGKVVTFEEGCLPGGFGSAIMESLQAHDL---QVPVLPIGVPDLLVEHASPDESKQE 609

Query: 534 AGLTPSHIAATVFNILG 550
            GLTP  +A  +    G
Sbjct: 610 LGLTPRQMADRILEKFG 626


>gi|398901781|ref|ZP_10650572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM50]
 gi|398179392|gb|EJM67004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM50]
          Length = 632

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/538 (47%), Positives = 344/538 (63%), Gaps = 27/538 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A VD  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAVDPRLVGITPAMKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QRAYDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRAYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + D P+  RYPRG G     P      P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYDGPAAVRYPRGTGPNA--PIAKDLEPIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQLAEALKVAEKLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDAYVEHAKPAQMLAECGL 614


>gi|148826942|ref|YP_001291695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittGG]
 gi|166198621|sp|A5UEV6.1|DXS_HAEIG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148718184|gb|ABQ99311.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           PittGG]
          Length = 625

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/552 (45%), Positives = 350/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+  F  R ESE+D    GHSSTSISAGLG+AV  + +      V VIGDG+
Sbjct: 95  MSTIRQKGGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENASRKTVCVIGDGS 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 155 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+D+L
Sbjct: 206 STLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNIDEL 264

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++  +
Sbjct: 265 VATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP-T 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA GL
Sbjct: 322 YSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFATGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 382 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDISFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +GK 
Sbjct: 442 RCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIGKS 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+++A+L +GT     L  SAL  S  L  TV D RF KP+D  +I  LA++H+ 
Sbjct: 498 RLIREGQKIAILNFGT-----LLPSALELSEKLNATVVDMRFVKPIDIEMINMLAQTHDY 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + LA  GL   
Sbjct: 553 LVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALADLGLDTK 609

Query: 540 HIAATVFNILGQ 551
            I   + N + +
Sbjct: 610 GIEEKILNFIAK 621


>gi|253990913|ref|YP_003042269.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus asymbiotica]
 gi|253782363|emb|CAQ85527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus asymbiotica]
          Length = 621

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/546 (48%), Positives = 348/546 (63%), Gaps = 30/546 (5%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGDGA 60
           T+RQ +GL  F  R ESEYD    GHSSTSISAGLGMA+   R+ KGR+   V VIGDGA
Sbjct: 97  TIRQKNGLHPFPWRDESEYDTLCVGHSSTSISAGLGMAIAAQRENKGRR--TVCVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG +D D++VILNDN ++S+           VGAL++ L++L S +  
Sbjct: 155 ITAGMAFEAMNHAGDIDPDILVILNDN-EMSISEN--------VGALNNHLAQLLSGKLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K V   +  P+ EL  K +E+ +GM+     TLFEELG  YIGP+DGH+V  L
Sbjct: 206 TTLREGGKKVFSNLP-PIKELLKKTEEHIKGMVIPG--TLFEELGFNYIGPIDGHDVLTL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
              L+ ++  K  GP L+H++T+KGRGY  AEK    +H V KFDPATG   KSS    +
Sbjct: 263 TQTLKNMRELK--GPQLLHIMTKKGRGYAPAEKDPISWHAVPKFDPATGTLPKSSDNRPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           ++  F E L  EA  DK ++AI  AM  G+G+  F R +P + FDV IAEQHAVTFAAGL
Sbjct: 321 FSKIFGEWLCEEAANDKKLMAITPAMREGSGMVRFSREYPDQYFDVAIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQV+HDV +Q LPV FA+DR G+VGADG TH G+FD++F+
Sbjct: 381 AIGGYKPIVAIYSTFLQRAYDQVIHDVAIQNLPVLFAIDRGGIVGADGQTHQGAFDLSFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MAPSDE E   M+ T       P   RYPRG G G EL P  +   L +GKG
Sbjct: 441 RCIPNMVIMAPSDENECRQMLHTGYHYQQGPVAVRYPRGAGTGAELQPFEQ---LPIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +G++VA+L +GT     L   A+  +  L  TV D RF KPLD  LI  +A SH++
Sbjct: 498 VIRRQGKKVAILNFGT-----LLPDAITAAESLNATVIDMRFVKPLDKELILEMAGSHDL 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L Q+G     ++   L LPD+++  GS  +  A  GL  +
Sbjct: 553 LVTLEENAIMGGAGSGVNELLMQEG---HHIQILNLGLPDQFVPQGSQEEIRADLGLDAT 609

Query: 540 HIAATV 545
            I  ++
Sbjct: 610 GIKNSI 615


>gi|333979345|ref|YP_004517290.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           kuznetsovii DSM 6115]
 gi|333822826|gb|AEG15489.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 639

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/564 (47%), Positives = 353/564 (62%), Gaps = 26/564 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  G+SGF +  ESE+D FGTGHSSTSISA LG+A+ RDLKG   +VVAVIGDGA
Sbjct: 89  FHTLRQFGGISGFPRPQESEHDAFGTGHSSTSISAALGLALARDLKGDNYSVVAVIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G A+EA+N+AG+  + +IV+LNDN+    P          VG L+  LSRL+++ P+
Sbjct: 149 MTGGMAFEALNHAGHHKTSLIVVLNDNEMSIAPN---------VGGLAKYLSRLRTD-PM 198

Query: 121 -----RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH 175
                 EL ++ K +   IG  + +   +V +  + ++       FEELG  Y+GP+DGH
Sbjct: 199 YSKGKEELEQLLKRIPA-IGPRVVKAVERVKDSLKYLVVPG--MFFEELGFIYLGPIDGH 255

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+  ++ + ++ K T+  GPVL+HV+T KGRGYP AE+ ADK+HGV  F+  TG+  K  
Sbjct: 256 NIQAMINVFQQAKTTR--GPVLVHVLTRKGRGYPPAEENADKFHGVGPFEVKTGQVIKKP 313

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SYT  F   L+     DK +VAI AAM  GTGL+ F   FP R +DVGIAEQHAVT
Sbjct: 314 GQPPSYTEVFGRTLVELGRRDKRIVAITAAMPSGTGLDHFAAAFPERFYDVGIAEQHAVT 373

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
             AGLA  GL+P  AIYS+F+QRAYDQV+HDV LQ LPV FA+DRAGLVG DG TH G F
Sbjct: 374 LGAGLAAGGLRPVVAIYSTFLQRAYDQVLHDVCLQNLPVTFALDRAGLVGEDGATHHGVF 433

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D  ++  +PN+V+MAP DE EL  M+ TA      P+  RYPR  G G   P   + +PL
Sbjct: 434 DFAYLRSIPNLVLMAPGDENELRRMLKTALEYPG-PAVLRYPRSAGTGC--PLDEEILPL 490

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            VGK R+L EG+ V LL  GT V     A++LLE  G+  TV +ARF KPLD   I   A
Sbjct: 491 PVGKARVLREGDDVTLLAAGTMVSLAGEAASLLEQQGIHATVINARFVKPLDEECITRYA 550

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
                ++T+EE  + GGFGS V++ L   GL +  V+   L +PD +I+HGS A  LA+ 
Sbjct: 551 LRTRRVVTIEEHVLQGGFGSAVLELLGDRGLRN--VQVIRLGIPDEFIEHGSRAVLLARC 608

Query: 535 GLTPSHIAATVFNILGQTREALEI 558
           GLT   +  TV   LG  R   ++
Sbjct: 609 GLTVEVLVNTVLKALGAHRAKTKV 632


>gi|395498974|ref|ZP_10430553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. PAMC
           25886]
          Length = 632

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/547 (46%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MATLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLNAPAAAPKKPSGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  VALL +G  +   L  +  +++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSGVALLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I A+V
Sbjct: 617 AGIEASV 623


>gi|33861464|ref|NP_893025.1| 1-deoxy-D-xylulose-5-phosphate synthase [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
 gi|41016947|sp|Q7V1G6.1|DXS_PROMP RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|33634041|emb|CAE19366.1| 1-deoxy-D-xylulose 5-phosphate synthase [Prochlorococcus marinus
           subsp. pastoris str. CCMP1986]
          Length = 637

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/552 (44%), Positives = 351/552 (63%), Gaps = 24/552 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           ++RQ  G++G+ KRSES +D FG GH+STSISA LGMA+ RD KG  +  VAVIGDGA+T
Sbjct: 89  SLRQQKGIAGYLKRSESHFDHFGAGHASTSISAALGMAIARDRKGEDHKCVAVIGDGALT 148

Query: 63  AGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLR 121
            G A EA+N+AG+L ++ ++V+LNDN  +S+         PPVGALS+ L+R++ + PL+
Sbjct: 149 GGMALEAINHAGHLPNTPLVVVLNDN-DMSIS--------PPVGALSTYLNRVRLSPPLQ 199

Query: 122 ELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            L +  +   K I   G  + E    +    R +       +FEELG  Y+GP+DGH++ 
Sbjct: 200 FLSDSVQESVKNIPLIGKDIPEELKNIKGSVRRLAVPKVGAVFEELGFTYMGPIDGHDIS 259

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA-R 237
           +L+         K   PV++HVVT KG+GYPYAE     YH  + FD  TGK   SS  +
Sbjct: 260 NLINTFNAAHRLKK--PVMVHVVTTKGKGYPYAEADQVGYHAQSSFDLTTGKSIPSSKPK 317

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SY+  F + L+   E D  V+ I AAM  GTGL+L  +  P +  DVGIAEQHAVT A
Sbjct: 318 PVSYSKIFGQTLLKICEQDSKVIGITAAMATGTGLDLLQKNIPEQYIDVGIAEQHAVTLA 377

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AG++C+GLKP  AIYS+F+QRA+DQ++HDV +Q LPV F +DRAG+VGADGPTH G +D+
Sbjct: 378 AGMSCDGLKPVVAIYSTFLQRAFDQLIHDVGIQNLPVSFVLDRAGIVGADGPTHQGQYDI 437

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLE 416
           ++M  +PN V+MAP DEAEL  M+ T+      P+  R PRG+G+GV +   ++G  PL+
Sbjct: 438 SYMRAIPNFVLMAPKDEAELQRMLITSINYKG-PTALRIPRGSGLGVAV--MDEGWEPLK 494

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G+G IL EG+ V ++ YG+ VQS    + LL++ G+   + +ARF +PLD  LI  L +
Sbjct: 495 IGEGEILEEGDDVLIIAYGSMVQSATETANLLKNRGISACIINARFVRPLDQDLIIPLVR 554

Query: 477 SHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
             + ++T+EEG+ +GGFGS +V+ L  +   D  +    + +PD  +DH SP     + G
Sbjct: 555 KLKKVVTMEEGTLVGGFGSAIVEMLNDN---DINIPVLRIGIPDVLVDHASPDQSKEKLG 611

Query: 536 LTPSHIAATVFN 547
           LTP  +A  + N
Sbjct: 612 LTPDQMAEKIIN 623


>gi|77461228|ref|YP_350735.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Pf0-1]
 gi|119368202|sp|Q3K660.1|DXS_PSEPF RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|77385231|gb|ABA76744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Pf0-1]
          Length = 632

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/562 (45%), Positives = 352/562 (62%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 METLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P MV+M PSDE EL  M+ T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMVIMTPSDENELRKML-TTGHLYNGPAAVRYPRGTGPNATIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KP+D AL+R +A SH+
Sbjct: 505 GVVRRQGSKVALLVFGVQMAEALKVAETLDA-----TVVDMRFVKPMDEALVREIANSHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMS 560
             I A V       RE LE+++
Sbjct: 617 VGIEAAV-------RERLELLN 631


>gi|429331880|ref|ZP_19212620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida CSV86]
 gi|428763391|gb|EKX85566.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida CSV86]
          Length = 632

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/550 (47%), Positives = 354/550 (64%), Gaps = 33/550 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+T+RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MNTLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLRNEARKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + L   A  D+ +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG
Sbjct: 328 KYSAVFGQWLCDMAAADERLVGITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG+G     P  +   PLE+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRRMLST-GHLYNGPAAVRYPRGSGPNA--PIEDSLDPLEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G +VALL +G  +     A AL  +  L  TV D RF KPLD AL+  LA SH+
Sbjct: 505 GVIRRQGSKVALLVFGVQL-----AEALKVAETLNATVVDMRFVKPLDEALVLELAGSHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAG 535
           +L+T+EE +I GG G+ V +FLA++ +L      +PL+   LPD Y++H  PA  LA+ G
Sbjct: 560 LLVTIEENAIMGGAGAAVGEFLAREAVL------KPLLHLGLPDVYVEHAKPAQMLAECG 613

Query: 536 LTPSHIAATV 545
           L  + I A+V
Sbjct: 614 LDAAGIEASV 623


>gi|348617927|ref|ZP_08884461.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Candidatus Glomeribacter gigasporarum BEG34]
 gi|347816871|emb|CCD29115.1| 1-deoxy-D-xylulose-5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Candidatus Glomeribacter gigasporarum BEG34]
          Length = 636

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 266/561 (47%), Positives = 354/561 (63%), Gaps = 43/561 (7%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GLSGF +R ESEYD FGT HSSTSISA LGMA+   LK      +AVIGDGA
Sbjct: 91  MATLRQQGGLSGFPRRCESEYDAFGTAHSSTSISAALGMALASRLKDESRFCIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPP-VGALSSALSRLQSNR 118
           M+AG A+EAMN+AG  D   +IV+LNDN          D  I P VGAL+  L+RL S R
Sbjct: 151 MSAGMAFEAMNHAGVCDDLPLIVVLNDN----------DMSISPAVGALNRYLARLMSGR 200

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
                ++  + V + +  P+ E A + +E+A+GM+  +  TLFE LG  YIGP+DGH++D
Sbjct: 201 FYAAAKKGVETVLR-VAPPVLEFARRFEEHAKGMVVPA--TLFEALGFNYIGPIDGHDLD 257

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+  L  +K  K  GP  +HVVT+KG+GY  AE     YH   +F+P  G Q KS+ R+
Sbjct: 258 SLIPTLNNLKALK--GPQFLHVVTKKGQGYKLAEADPVLYHAPGQFNPLDGVQPKSARRS 315

Query: 239 ---QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F E L   A  D  +V I  AM  G+GL  F RRFP R +DVGIAEQHA+T
Sbjct: 316 AARKTYTQVFGEWLCEAAARDARIVGITPAMREGSGLVEFERRFPERYYDVGIAEQHALT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            A GLA EGLKP  AIYS+F+QRAYDQ++HD+ LQKLPV FA+DRAG+VGADG TH G++
Sbjct: 376 LAGGLAVEGLKPVVAIYSTFLQRAYDQLIHDIALQKLPVVFAIDRAGVVGADGATHMGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ F+ C+PN+ VMA SDE E + M+ TAA ++  P+  RYPRG+G G  +    + +P 
Sbjct: 436 DLAFLRCIPNLTVMAASDENECWQMLNTAAQLNG-PAAVRYPRGSGPGAPVFKHARALP- 493

Query: 416 EVGKGRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            +G+G +  E     G+R+A+L +GT V     A +L+ +  L  +VA+ RF KPLD  L
Sbjct: 494 -IGRGEMRRESAQPCGQRIAILAFGTMV-----AQSLIAAEQLDASVANMRFVKPLDQTL 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGS 526
           +  LA++H+ L+TVEEG + GG GS  ++ L   G+       RP++   L DR+IDHG 
Sbjct: 548 VVQLAQTHDALVTVEEGCVMGGAGSACIESLLAHGI------ERPMLQLGLSDRFIDHGD 601

Query: 527 PADQLAQAGLTPSHIAATVFN 547
           PA  L   GL    IA  + N
Sbjct: 602 PARLLTDHGLDGEGIAQAIQN 622


>gi|378953115|ref|YP_005210603.1| hypothetical protein PSF113_5228 [Pseudomonas fluorescens F113]
 gi|359763129|gb|AEV65208.1| Dxs [Pseudomonas fluorescens F113]
          Length = 632

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/551 (46%), Positives = 353/551 (64%), Gaps = 35/551 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDP-----ATGKQFKSS 235
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P     AT K+    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAATPKK---- 323

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
           A    Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT
Sbjct: 324 AGGPKYSGVFGQWLCDMAAADPRLVGITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVT 383

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSF
Sbjct: 384 LAAGMACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSF 443

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D++F+ C+P M+VM PSDE EL  M+ T    +  P+  RYPRG G    +    +  P+
Sbjct: 444 DLSFLRCIPGMLVMTPSDENELRKMLTTGHLFNG-PAAVRYPRGTGPNATISTDLE--PI 500

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+GKG I  +G++ ALL +G  +   L  + +L++     TV D RF KPLD AL+R +A
Sbjct: 501 EIGKGVIRRQGKQTALLVFGVQLAESLKVAEILDA-----TVVDMRFVKPLDEALVREMA 555

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
            SH++L+T+EE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ 
Sbjct: 556 GSHDLLVTLEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDTYVEHAKPAQMLAEC 612

Query: 535 GLTPSHIAATV 545
           GL  + I A V
Sbjct: 613 GLDEAGIEAAV 623


>gi|261493236|ref|ZP_05989763.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496521|ref|ZP_05992901.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261307724|gb|EEY09047.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311086|gb|EEY12262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 617

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/549 (46%), Positives = 345/549 (62%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DG+  F  R ES YD    GHSSTSISAGLG+AV  + +      V VIGDGA
Sbjct: 92  MHTIRQKDGIHPFPWREESPYDVLSVGHSSTSISAGLGIAVAAEKENAGRKTVCVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 152 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSLY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ +K +  ++   +     K +E+ +G+I    STLFEELG  YIGP+DGHN+D+L
Sbjct: 203 TSVRDGSKKILDKVPT-IKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDEL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  ++  K  GP  +H+ T+KG+GY  AE     YHGV KFDP   +  KS A   +
Sbjct: 262 VKTLSNMRELK--GPQFLHIRTKKGKGYTPAENDPIGYHGVPKFDPTAAELPKSKA-APT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTF AGL
Sbjct: 319 YSNIFGDWLCEMAERDPKIIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYSSF+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 379 AIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFM 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +MAPSDE E+  M+ TA  + + PS  RYPRGN  GV+L P      LEVGK 
Sbjct: 439 RCIPNMTIMAPSDENEMRQMLYTAYTM-NTPSAIRYPRGNAKGVKLEPMQG---LEVGKA 494

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I+ EG++VA+L +G      L   A + +     T+ D RF KPLD AL++ +A SHE+
Sbjct: 495 NIIREGKKVAILNFG-----ALLDEAKIVAEKHNYTLVDMRFIKPLDEALLQKVADSHEL 549

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG GS V ++L   G      K +PLV+   PD ++   + A+  A  GL
Sbjct: 550 LVTLEENAIQGGAGSFVNEYLQNIG------KIKPLVMLGIPDFFVPQSTQAEAYADLGL 603

Query: 537 TPSHIAATV 545
               I A +
Sbjct: 604 DAQGIEAKI 612


>gi|337278945|ref|YP_004618416.1| 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase [Ramlibacter
           tataouinensis TTB310]
 gi|334730021|gb|AEG92397.1| 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating)
           [Ramlibacter tataouinensis TTB310]
          Length = 628

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 262/547 (47%), Positives = 350/547 (63%), Gaps = 28/547 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  GL+GF  R+ESEYD FGT HSSTSISA LGMAV    +G     VA+IGDGA
Sbjct: 89  MGTLRQLGGLAGFPLRTESEYDAFGTAHSSTSISAALGMAVAAHRQGEDRKAVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPI-PPVGALSSALSRLQSNRP 119
           M+AG A+EA+NNAG  + +++VILNDN          D  I PPVGAL+  L++L S + 
Sbjct: 149 MSAGMAFEALNNAGVAECNLLVILNDN----------DMSISPPVGALNRYLAQLMSGQF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V K +  P+ +LA + +E+A+GM+  +  TLFE+ G  YIGP+DGH++  
Sbjct: 199 YAAAKSVGKNVLK-VAPPLFQLAKRFEEHAKGMVVPA--TLFEQFGFNYIGPIDGHDLHS 255

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  LE +K+ K  GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++    
Sbjct: 256 LIPTLENLKHLK--GPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVQPATPPKT 313

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F + L   A  D  +V I  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 314 TFTQVFGQWLCDMATQDARLVGITPAMREGSGLVEFEKRFPERYFDVGIAEQHAVTFAAG 373

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEGLKP  AIYS+F+QRAYDQ++HDV LQKLPV  A+DRAG+VGADGPTH G++D+ +
Sbjct: 374 LACEGLKPVVAIYSTFLQRAYDQLIHDVALQKLPVVLALDRAGIVGADGPTHAGAYDIPY 433

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PN+ +  P+DE E   +++ A A  D P   RYPRG G+G  +  G    PL  G+
Sbjct: 434 LRCIPNVSIACPADENECRGLLSAAFA-QDHPVAVRYPRGAGVGAAVDAGLA--PLPFGR 490

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G+RVA+L +GT +   L A+  L +     TV + R+ KPLD AL+  +A  HE
Sbjct: 491 GELRRQGQRVAILAFGTLLHPALRAAERLNA-----TVVNMRWAKPLDQALLLEVAARHE 545

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG++ GG GS V + LA  G+    ++   L L D +I HG PA  LA  GL  
Sbjct: 546 ALVTVEEGAVMGGAGSAVAEALAAAGVAKPLLQ---LGLRDEFIPHGDPARLLALQGLDD 602

Query: 539 SHIAATV 545
           + I  ++
Sbjct: 603 AGIERSI 609


>gi|270263553|ref|ZP_06191822.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13]
 gi|421781970|ref|ZP_16218430.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia plymuthica A30]
 gi|270042437|gb|EFA15532.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia odorifera 4Rx13]
 gi|407755844|gb|EKF65967.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia plymuthica A30]
          Length = 621

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 263/552 (47%), Positives = 345/552 (62%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DGL  F  R+ESEYD    GHSSTSISAGLGMAV  + +G+    V VIGDGA
Sbjct: 95  ISTIRQKDGLHPFPWRAESEYDVLSVGHSSTSISAGLGMAVAAEREGKNRRTVCVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG ++ DM+V+LNDN ++S+           VGAL++ L++L S +  
Sbjct: 155 ITAGMAFEAMNHAGDINPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L
Sbjct: 206 STLREGGKRVLSGLP-PIKELVKRTEEHLKGMVVPG--TLFEELGFNYIGPVDGHDVQGL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L+ +++ K  GP L+H++T+KGRGY  AEK    +H V KFDPA+G   KS+    S
Sbjct: 263 VATLKNMRDLK--GPQLLHIMTKKGRGYAPAEKDPISFHAVPKFDPASGTLPKSAGGQPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  ++AI  AM  G+G+  F R +P + FDV IAEQHAVTFAAGL
Sbjct: 321 YSKIFGDWLCETAAKDSSLMAITPAMREGSGMVQFSRDYPQQYFDVAIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +QKLPV FA+DR G+VGADG TH G+FD++FM
Sbjct: 381 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQKLPVMFAIDRGGIVGADGQTHQGAFDLSFM 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P MV+M PSDE E   M+ T    ++ PS  RYPRGNG G +L P      L +GKG
Sbjct: 441 RCIPTMVIMTPSDENECRQMLYTGYHYNEGPSAVRYPRGNGTGAQLEPLGA---LPIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EGE+VA+L +GT     L   A   +  L  T+ D RF KPLD  L+  LA SHEV
Sbjct: 498 VVRREGEKVAILNFGT-----LLPEAAQVAEALNATLVDMRFVKPLDEQLVLELAASHEV 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L         V    + LPD ++  GS  +     GL  +
Sbjct: 553 LVTLEENAIMGGAGSGVNELLMAK---RRAVPVLNIGLPDSFVSQGSQEEVRVDLGLDAA 609

Query: 540 HIAATVFNILGQ 551
            I   +   L Q
Sbjct: 610 GIRRQIEAWLAQ 621


>gi|428773332|ref|YP_007165120.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobacterium stanieri
           PCC 7202]
 gi|428687611|gb|AFZ47471.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanobacterium stanieri
           PCC 7202]
          Length = 639

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/569 (44%), Positives = 352/569 (61%), Gaps = 25/569 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KRSE+++D FG GH+STSISAGLGMA+ RD KG    VV+VIGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRSENKFDHFGAGHASTSISAGLGMALARDAKGENFKVVSVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L +++++V+LNDN ++S+         P VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPNTNLMVVLNDN-EMSIS--------PNVGAISRYLNKVRLSDP 197

Query: 120 LRELREVAKGVTKQI-----GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDG 174
           ++ L    +   K       G  +      + E  + +       + EELG  Y GPVDG
Sbjct: 198 IQFLTGNIEEQFKHFPFFGDGENLSPEMRNLKEAMKRLAMPKVGAVIEELGFTYFGPVDG 257

Query: 175 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 234
           HN+D+L+   +  K  K  GPV +HVVT KG+GY  AEK    YH  + F+  TGK   S
Sbjct: 258 HNIDELINTFQ--KAHKVKGPVFVHVVTVKGKGYSMAEKDQVGYHAQSPFNLTTGKPIPS 315

Query: 235 SA-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHA 293
           +  +  SY+  FA  L   AE D  ++ I AAM  GTGL+   ++ P +  DVGIAEQHA
Sbjct: 316 NKPKPPSYSKVFAHTLTTLAENDPKIIGITAAMATGTGLDKLQQKLPKQYIDVGIAEQHA 375

Query: 294 VTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG 353
           VT AAGLACEG+ P  AIYS+F+QRAYDQ++HDV +QK+PV F +DRAG+VGADGPTH G
Sbjct: 376 VTLAAGLACEGMTPVAAIYSTFLQRAYDQIIHDVCIQKIPVFFCLDRAGIVGADGPTHQG 435

Query: 354 SFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKG 412
            +D+ ++ C+PN+V+MAP DEAEL  M  T     +     RYPRGNG+GV L   G + 
Sbjct: 436 MYDIAYLRCIPNLVIMAPKDEAELQRMTVTGIKHKESAIAMRYPRGNGLGVPLAEEGWEE 495

Query: 413 IPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
           IP  +GKG IL  G+ V L+GYG+ V + +  + +L  +G+  TV +ARF KPLD  LI 
Sbjct: 496 IP--IGKGEILRNGDDVLLVGYGSMVNNAMQTAEILSEHGVEATVINARFVKPLDTELIV 553

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA+    ++T+EEG I GGFGS V + L    +    V  + + +PD  +DH +PA   
Sbjct: 554 PLAEKIGKVVTLEEGCIMGGFGSAVAEALIDHNV---NVPVKRIGVPDILVDHATPAQSF 610

Query: 532 AQAGLTPSHIAATVFNILGQTREALEIMS 560
           A  GLT   IA  V N     +  + + S
Sbjct: 611 ADLGLTSPQIAERVLNTFFSDKPEMAVKS 639


>gi|194476654|ref|YP_002048833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paulinella chromatophora]
 gi|171191661|gb|ACB42623.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paulinella chromatophora]
          Length = 632

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/557 (45%), Positives = 350/557 (62%), Gaps = 24/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
             T+RQ  G++G+ KRSES +D FG GH+STSISA LGMA+ RD +G     VAVIGDGA
Sbjct: 87  FQTLRQKGGVAGYLKRSESRFDHFGAGHASTSISAALGMAMARDQRGENFKCVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++VILNDN  +S+         PPVGALS+ L+R++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTRLLVILNDN-DMSIS--------PPVGALSTYLNRMRLSPP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L   A+   K +   GG +     ++ E  R +       +FEELG  Y+GPV+GHN
Sbjct: 198 VQFLSGSAEEAVKHLPFMGGELPAELERLKESMRRLAVPKVGAVFEELGFTYMGPVNGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           + ++V   +     +  GPVL+HV T KG+GYPYAE     YH    FD A+GK + SS 
Sbjct: 258 ITEMVRTFQAAH--RCEGPVLVHVATMKGKGYPYAEADQVGYHAQPAFDLASGKAYPSSK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  F + L+   E D  VV I AAM  GTGL+L  +  P +  DVGIAEQHAVT
Sbjct: 316 PKPPSYSKVFGQTLVKLCEQDARVVGITAAMATGTGLDLLQKAIPGQYVDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+ACEGLKP  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGMACEGLKPVVAIYSTFLQRAYDQLIHDVGIQNLPVTFVLDRAGIVGADGPTHQGQY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D+++M  +PN  VMAP DEAEL  M+ T   + D PS  R PRG G GV  P   +G  P
Sbjct: 436 DISYMRAIPNFTVMAPKDEAELQRMLVT-CLLHDGPSALRIPRGEGEGV--PLAEEGWEP 492

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           L +G+G ++ +GE + ++ YG+ V S +  S LL ++G++  V +ARF +PLD  LI S+
Sbjct: 493 LSIGRGELITDGEDILIVAYGSMVVSAITTSELLRTSGIQAAVINARFLRPLDETLILSM 552

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           AK    ++T+EEGS+ GGFGS V+  L  + +L   V    + +PD  ++H SP +    
Sbjct: 553 AKKIGRVVTMEEGSLPGGFGSAVLDSLNDNNIL---VPIFRIGIPDVLVNHASPKESKQS 609

Query: 534 AGLTPSHIAATVFNILG 550
             LTP  +A  +    G
Sbjct: 610 LELTPIQMAERIIKRFG 626


>gi|161378143|ref|NP_742690.2| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida KT2440]
 gi|38372168|sp|Q88QG7.2|DXS_PSEPK RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
          Length = 631

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/549 (46%), Positives = 350/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE+VALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA SHE+
Sbjct: 505 VVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   +L      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DAAGIEASV 622


>gi|261341012|ref|ZP_05968870.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316877|gb|EFC55815.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cancerogenus
           ATCC 35316]
          Length = 620

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/547 (47%), Positives = 347/547 (63%), Gaps = 32/547 (5%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + + ++   V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKENKQRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIKPDMLVILNDN-EMSISEN--------VGALNNHLAQLLSGKLYST 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  LV 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLVT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP +G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPTSGCLPKSSGGMPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++A+  AM  G+G+  F +++P + FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAVTPAMREGSGMVEFSKKYPDQYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++F+ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P+MV+M PSDE E   M+ T     D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPDMVIMTPSDENECRQMLFTGYHYQDGPSAVRYPRGNAVGVELKPLEK---LAIGKGLV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE+VA+L +GT     L   A   ++ L  T+ D RF KPLD ALI  +A SHE+L+
Sbjct: 500 KRRGEKVAILNFGT-----LMPEAAQVADTLNATLVDMRFVKPLDEALILEMAASHELLV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTP 538
           T+EE +I GG GS V + L  +       KW P++   LPD +I  G+  +  A  GL  
Sbjct: 555 TLEENAIMGGAGSGVNEVLMANR------KWVPVLNLGLPDHFIPQGTQDEARAAIGLDA 608

Query: 539 SHIAATV 545
           + I A +
Sbjct: 609 AGIEAKI 615


>gi|113868690|ref|YP_727179.1| 1-deoxy-D-xylulose-5-phosphate synthase [Ralstonia eutropha H16]
 gi|123032800|sp|Q0K860.1|DXS_RALEH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|113527466|emb|CAJ93811.1| Deoxyxylulose-5-phosphate synthase [Ralstonia eutropha H16]
          Length = 638

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 273/571 (47%), Positives = 359/571 (62%), Gaps = 36/571 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G    G K   VAVIGDGA
Sbjct: 90  MGTLRQWGGISGFPRRSESEYDTFGTAHSSTSISAALGMALGARTLGEKRVSVAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRHLARLLSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ K   +  P+ E A + +E+A+GM+  +  TLFEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGMMVPA--TLFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++    +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  + 
Sbjct: 256 NSLVPTLQNIRERALEGAGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPAAK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F + L   A  DK +V I  AM  G+G+  F RRFP R +DVGIAEQHAVT
Sbjct: 316 PARKTYTQVFGDWLCDMAAADKRLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM PSDE E   ++ TA      PS  RYPRG+G G  +      +P 
Sbjct: 436 DIAYLRCIPNMMVMTPSDENECRQLLTTAFH-QACPSAVRYPRGSGPGAAIAAELTTVP- 493

Query: 416 EVGKGRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG +  E     G RV  L +G+ V   L A+  L++      VAD RF KPLD  L
Sbjct: 494 -VGKGVMRREGGARAGHRVGFLAFGSMVHPALGAAEALDA-----AVADMRFVKPLDVEL 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           ++ LA  ++ L+TVEEGS+ GG GS V++ LA+ G+    +    L LPDR++DHG PA 
Sbjct: 548 VKRLAAENDYLVTVEEGSVMGGAGSAVLEALAEAGIDKPVLT---LGLPDRFVDHGDPAY 604

Query: 530 QLAQAGLTPSHIAATVFNILGQTREALEIMS 560
            L Q GL  + I  +V    G  +  + + S
Sbjct: 605 LLQQCGLDAAGIERSVRERFGLDQPKVTVAS 635


>gi|408479221|ref|ZP_11185440.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. R81]
          Length = 632

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/547 (46%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+G     +AVIGDGA
Sbjct: 102 MGSLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPVDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G + A L +G  +   L  +  +++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSKTAFLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I A+V
Sbjct: 617 AGIEASV 623


>gi|56477948|ref|YP_159537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Aromatoleum aromaticum
           EbN1]
 gi|81598684|sp|Q5P228.1|DXS_AZOSE RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56313991|emb|CAI08636.1| 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) (DXP synthase)
           (DXPS) [Aromatoleum aromaticum EbN1]
          Length = 621

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/547 (47%), Positives = 348/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF +RSES YD FGT HSSTSISA LGMAV    +G +   +AVIGDGA
Sbjct: 91  MSRLRQFGGISGFPRRSESSYDTFGTAHSSTSISAALGMAVAARNRGEQRRSIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EA+NNAG + D +++VILNDN ++S+         PPVGAL+  L+R+ S R 
Sbjct: 151 MSAGMAFEALNNAGDMRDINLLVILNDN-EMSIS--------PPVGALTKILARMFSGRT 201

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  PM + A KV+E+ +G+I+    TLFEE G +Y GP+DGH++D 
Sbjct: 202 YNAARRAGEKVLG-VSPPMLDFARKVEEHVKGLITPG--TLFEEFGFHYYGPIDGHDLDA 258

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ ++  K  GP  +HV+T KG+GY  AE     YHGV+ FD   G Q    A   
Sbjct: 259 LIPTLQNLR--KLNGPHFLHVITRKGQGYKLAEADPVLYHGVSTFDHTAGIQTAKGAAKL 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F + L   A  D+ V+ I  AM  G+G+  F + FP R +DVGIAEQHA+TFAAG
Sbjct: 317 TYTQVFGDWLCDIAAQDEKVIGITPAMREGSGMVRFAQEFPNRYYDVGIAEQHALTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QRAYDQ++HD+ LQ LPV FA+DRAGLVGADG TH G+FD+++
Sbjct: 377 LACEGFKPVVAIYSTFLQRAYDQLIHDIALQNLPVMFAIDRAGLVGADGATHHGAFDLSY 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PN+VVMAP+DE E   M+ TA    + P+  RYPRG G+  ++ P      L +GK
Sbjct: 437 LGCIPNLVVMAPADENECRQMLYTAYR-HNGPAAVRYPRGGGM--QVGPETAMSALPIGK 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I   G R+ALL +G+ + + L A+  L++     TVA+ RF KPLD  LI  LA SH+
Sbjct: 494 GEIRRSGHRIALLVFGSLLFNALQAAEQLDA-----TVANMRFVKPLDVTLIEELAASHD 548

Query: 480 VLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE   IGG GS V + L  + L D     R L LPD +IDHG  +  L   GL  
Sbjct: 549 LLVTLEENIVIGGAGSEVARVL--ESLSDRPQLLR-LGLPDTFIDHGDQSQLLESVGLDA 605

Query: 539 SHIAATV 545
             I A +
Sbjct: 606 PGIVAAI 612


>gi|452746755|ref|ZP_21946565.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri NF13]
 gi|452009232|gb|EME01455.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri NF13]
          Length = 632

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/546 (45%), Positives = 346/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +GL+ F +RSES+YD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MATLRQKEGLAAFPRRSESQYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPAKPKKPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + PG +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNATIEPGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G +VALL +G  +   L     L++     TV D RF KPLD AL+R LA +HE+
Sbjct: 505 VVRRQGSKVALLVFGVQLPEALQVGEALDA-----TVVDMRFVKPLDEALLRELAGNHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE SI  G GS V +FL  + +L   +    L LPD Y++H  P++ LA+ GL  +
Sbjct: 560 LVTIEENSIMAGAGSAVAEFLTGESILKPMLH---LGLPDYYVEHAKPSEMLAECGLDAA 616

Query: 540 HIAATV 545
            I A V
Sbjct: 617 GIEAAV 622


>gi|418293778|ref|ZP_12905680.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
 gi|379065163|gb|EHY77906.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
          Length = 632

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/546 (45%), Positives = 345/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL+ F +R ESEYD FG GHSSTSISA LGMAV   LKG +   +AVIGDGA
Sbjct: 102 MGTLRQKDGLAAFPRRVESEYDTFGVGHSSTSISAALGMAVAARLKGEQRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+V+LNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVGANMLVVLNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 SSMREGSKKILSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     +H ++K +P              
Sbjct: 270 IATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPITWHAISKLEPVGAPPAPKKPLGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +  I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADPRLTGITPAMKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGMKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE E+  M+ T    +  P+  RYPRG+G    + PG +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENEMRRMLTTGYHFEG-PAAVRYPRGSGPNAAIEPGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G +VALL +G  +   L     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRKGSKVALLVFGVQLPEALQVGEALDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE SI  G GS V +FL  + +L   +    L LPD Y++H  P++ LA+ GL  +
Sbjct: 560 LVTIEENSIMAGAGSAVAEFLTGESILKPMLH---LGLPDYYVEHAKPSEMLAECGLDAA 616

Query: 540 HIAATV 545
            I A V
Sbjct: 617 GIEAAV 622


>gi|254415673|ref|ZP_05029432.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196177623|gb|EDX72628.1| 1-deoxy-D-xylulose-5-phosphate synthase [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 635

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/553 (45%), Positives = 349/553 (63%), Gaps = 25/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR E+++D FG GH+STSISA LGMA+ RD KG      AVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCENKFDHFGAGHASTSISAALGMALARDAKGENFKTAAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN ++S+         P VGA+S +L+R++ ++P
Sbjct: 147 LTGGMALEAINHAGHLPHTRLLVVLNDN-EMSIS--------PNVGAISRSLNRVRLSKP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K        L  ++     GM    +   G+ L EELG  Y+GPVDGH
Sbjct: 198 MQFLADNLEEQFKHFPLFGESLTPELQRVKEGMKRLAVPKVGAVL-EELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N++DL+   +       +GPVL+HVVT KG+GY  AE+    YH  + FD  TGK   S+
Sbjct: 257 NLEDLITTFKSAHTY--SGPVLVHVVTTKGKGYAIAEQDQVGYHAQSPFDLTTGKAIPSN 314

Query: 236 A-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             +   Y+  FA  L+  AE +  ++ I AAM  GTGL     + P +  DVGIAEQHAV
Sbjct: 315 KPKPPGYSKVFAHTLVKLAENNPKIIGITAAMATGTGLTKLQEKLPKQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGI 413
           +D+ ++ C+PN+VVMAP DEAEL  M+ T     + P   RYPRGNG GV L   G  G+
Sbjct: 435 YDIAYLRCIPNIVVMAPKDEAELQRMLVTGVNYTEGPIAMRYPRGNGYGVPLMEEGWDGL 494

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P  +GKG IL  G+ + L+GYG+ V   +  + +L  +G+  TV +ARF KPLD  LI  
Sbjct: 495 P--IGKGEILRNGDDILLIGYGSMVYPAMQTAEILSEHGIEATVVNARFVKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    ++T+EEG + GGFGS V + L+ + +L   V  +   +PD+ +DH  P +  A
Sbjct: 553 LAQRIGKVVTLEEGCLMGGFGSAVTEALSDNNVL---VPVKRFGVPDKLVDHAKPDESKA 609

Query: 533 QAGLTPSHIAATV 545
             GLTPS +A  V
Sbjct: 610 DLGLTPSQMAQQV 622


>gi|16329681|ref|NP_440409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC
           6803]
 gi|383321423|ref|YP_005382276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|383324593|ref|YP_005385446.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|383490477|ref|YP_005408153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|384435743|ref|YP_005650467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC
           6803]
 gi|451813841|ref|YP_007450293.1| hypothetical protein MYO_15190 [Synechocystis sp. PCC 6803]
 gi|3023661|sp|P73067.1|DXS_SYNY3 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|1652165|dbj|BAA17089.1| sll1945 [Synechocystis sp. PCC 6803]
 gi|339272775|dbj|BAK49262.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC
           6803]
 gi|359270742|dbj|BAL28261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|359273913|dbj|BAL31431.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|359277083|dbj|BAL34600.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|407957565|dbj|BAM50805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bacillus subtilis
           BEST7613]
 gi|451779810|gb|AGF50779.1| hypothetical protein MYO_15190 [Synechocystis sp. PCC 6803]
          Length = 640

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/559 (45%), Positives = 353/559 (63%), Gaps = 23/559 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KRSES +D FG GH+STSISAGLGMA+ RD KG    VV++IGDGA+
Sbjct: 88  HTLRQKDGVAGYLKRSESRFDHFGAGHASTSISAGLGMALARDAKGEDFKVVSIIGDGAL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L  + ++VILNDN ++S+         P VGA+S  L++++ + P+
Sbjct: 148 TGGMALEAINHAGHLPHTRLMVILNDN-EMSIS--------PNVGAISRYLNKVRLSSPM 198

Query: 121 RELREVAKGVTKQ---IGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           + L +  +   K    +G  +     +V E  + ++      + EELG  Y GP+DGH++
Sbjct: 199 QFLTDNLEEQIKHLPFVGDSLTPEMERVKEGMKRLVVPKVGAVIEELGFKYFGPIDGHSL 258

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA- 236
            +L+   ++ +  K  GPV +HV T KG+GY  AEK    YH  + F+ +TGK + SS  
Sbjct: 259 QELIDTFKQAE--KVPGPVFVHVSTTKGKGYDLAEKDQVGYHAQSPFNLSTGKAYPSSKP 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +  SY+  FA  L   A+ + ++V I AAM  GTGL+    + P +  DVGIAEQHAVT 
Sbjct: 317 KPPSYSKVFAHTLTTLAKENPNIVGITAAMATGTGLDKLQAKLPKQYVDVGIAEQHAVTL 376

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAG+ACEG++P  AIYS+F+QR YDQ++HDV +QKLPV F +DRAG+VGADGPTH G +D
Sbjct: 377 AAGMACEGIRPVVAIYSTFLQRGYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMYD 436

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PL 415
           + ++ C+PN+V+MAP DEAEL  M+ T           RYPRGNGIGV  P   +G  PL
Sbjct: 437 IAYLRCIPNLVLMAPKDEAELQQMLVTGVNYTGGAIAMRYPRGNGIGV--PLMEEGWEPL 494

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+GK  IL  G+ V LLGYG+ V   L  + LL  +G+  TV +ARF KPLD  LI  LA
Sbjct: 495 EIGKAEILRSGDDVLLLGYGSMVYPALQTAELLHEHGIEATVVNARFVKPLDTELILPLA 554

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           +    ++T+EEG + GGFGS V + L  + +L   V  + L +PD  +DH +P       
Sbjct: 555 ERIGKVVTMEEGCLMGGFGSAVAEALMDNNVL---VPLKRLGVPDILVDHATPEQSTVDL 611

Query: 535 GLTPSHIAATVFNILGQTR 553
           GLTP+ +A  +   L +T 
Sbjct: 612 GLTPAQMAQNIMASLFKTE 630


>gi|206602066|gb|EDZ38548.1| Deoxyxylulose-5-phosphate synthase [Leptospirillum sp. Group II
           '5-way CG']
          Length = 630

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 261/554 (47%), Positives = 347/554 (62%), Gaps = 22/554 (3%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ  GL+GF K  ES +D F  GH+ TSISA LGMA  RDLKG K +VVAV+GDG+
Sbjct: 89  LKTIRQWKGLAGFPKPEESVHDAFSAGHAGTSISAALGMAEARDLKGEKYHVVAVVGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A EA+N AG    +++VILNDN ++S+           VGALS  L+R+ S+   
Sbjct: 149 LTAGMAMEALNQAGARKKNLLVILNDN-EMSISEN--------VGALSDYLARITSDPRW 199

Query: 121 RELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
             LR   +G+ ++I   G PM  +A    E   GM+S  G  LFEE+G  Y+GP+DGH  
Sbjct: 200 EGLRRRTEGLMREIPMIGEPMVRMAQVAHESVVGMLSKPG-LLFEEMGFRYVGPIDGH-- 256

Query: 178 DDLVAILEEVKNTKTT-GPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
            DL  +L+ + N K   GP+L+HV+T KG+GYP AEK    +HGV  FD ATG+  K  A
Sbjct: 257 -DLPLLLQTIGNLKEQPGPILLHVLTVKGKGYPPAEKNPITFHGVTPFDIATGEIKKKPA 315

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              +YT  F++ +I       D+ AI AAM  GTGL  F + FP R  DVGIAEQHAVT 
Sbjct: 316 GAPAYTKIFSQTMIELGHRFPDLFAITAAMPEGTGLVDFRKTFPERFVDVGIAEQHAVTL 375

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           A G+A +G+ P  AIYS+F+QRAYDQ+VHD+ LQ L V FA+DR GLVG DGPTH G FD
Sbjct: 376 AGGMAAQGITPVVAIYSTFLQRAYDQLVHDICLQNLHVVFALDRGGLVGEDGPTHHGVFD 435

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++  +PNMVVMAP DE EL HM+ T A + D P   RYPRG G GV L    + IP  
Sbjct: 436 IAYLRHIPNMVVMAPKDENELRHMLYT-AVLHDGPIAVRYPRGEGQGVPLDKEFRSIP-- 492

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +G    L EG+ V LL YG+ V   + ++ LL + G+   V + RF KPLD +L+ S+ K
Sbjct: 493 IGTAETLREGQDVCLLAYGSMVPVAMESAGLLRAEGIDAGVVNMRFAKPLDTSLLASVVK 552

Query: 477 SHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
            +  ++T+EEG + GGFGS ++++LA    L G V  R + +PD+Y+DHGSP    A  G
Sbjct: 553 KYSHIVTMEEGVLKGGFGSAILEWLAMSDNL-GKVNVRMVGIPDQYVDHGSPKILRASLG 611

Query: 536 LTPSHIAATVFNIL 549
           LT   +  ++   L
Sbjct: 612 LTAPDVVKSLKEWL 625


>gi|24981908|gb|AAN66154.1|AE016243_6 deoxyxylulose-5-phosphate synthase [Pseudomonas putida KT2440]
          Length = 655

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/549 (46%), Positives = 350/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 126 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGA 185

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 186 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 236

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 237 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 293

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 294 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 351

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 352 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGM 411

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 412 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 471

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 472 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKG 528

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE+VALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA SHE+
Sbjct: 529 VVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHEL 583

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   +L      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 584 LVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGL 637

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 638 DAAGIEASV 646


>gi|398996324|ref|ZP_10699183.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM21]
 gi|398127098|gb|EJM16513.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM21]
          Length = 632

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/563 (45%), Positives = 355/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAASDPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRG+G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYNGPAAVRYPRGSGPNATIEKDLQ--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDHYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A++       RE L++++ 
Sbjct: 617 AGIEASI-------RERLQLLNL 632


>gi|294670646|ref|ZP_06735522.1| hypothetical protein NEIELOOT_02369 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307616|gb|EFE48859.1| hypothetical protein NEIELOOT_02369 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 540

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/559 (47%), Positives = 354/559 (63%), Gaps = 36/559 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M TMRQ  GL+GF KR ESEYD FG GHSSTSI A LGMAV   L GR N  VAVIGDGA
Sbjct: 1   MDTMRQYGGLAGFPKRGESEYDDFGVGHSSTSIGAALGMAVADKLAGRANRSVAVIGDGA 60

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSR---LQS 116
           MTAGQA+EA+N AG + D D++VILNDN+    P          VGAL   L+R      
Sbjct: 61  MTAGQAFEALNCAGDMQDVDLLVILNDNEMSISPN---------VGALPKYLARNVMRDM 111

Query: 117 NRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGS------TLFEELGLYYIG 170
           +  L  ++  ++ V  ++ G + E+A KV E+    ++  G+      +LFE  G  Y G
Sbjct: 112 HGLLSTIKAQSEKVLDKLPGAL-EIAQKV-EHKIKTLANEGNHIKQSLSLFENFGFAYTG 169

Query: 171 PVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK 230
           P DGHNV  LV  L E++  +  GP L+HV+T+KG+GY  AE    KYH + K    + +
Sbjct: 170 PADGHNVVQLVETLNELR--RKPGPKLLHVITKKGQGYKLAENDPVKYHAIGKAPAQSDR 227

Query: 231 QFKSSARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIA 289
             ++ A ++ +YT  F + L  +AE D  + AI  AM  G+GL  F +RFP R FDVGIA
Sbjct: 228 PSETPAPSRPTYTQIFGQWLCDQAEADHRLAAITPAMREGSGLVEFEQRFPDRYFDVGIA 287

Query: 290 EQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGP 349
           EQHAVTFAAGLACEG+KP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAG+VGADGP
Sbjct: 288 EQHAVTFAAGLACEGIKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGIVGADGP 347

Query: 350 THCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPG 409
           TH G++D++F+ C+PNMV+ APSDE E   +++T   + D+P+  RYPRG G G  +  G
Sbjct: 348 THAGAYDLSFLRCVPNMVIAAPSDENECRLLLSTCYRL-DQPAAVRYPRGTGCGAAVSDG 406

Query: 410 NKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHA 469
            + +P  VGKG I  +G++ A+L +G+ VQ  + A     +  L  TVAD RF KPLD  
Sbjct: 407 LETVP--VGKGVIRRQGQKTAILAFGSMVQPAMQA-----AESLNATVADMRFVKPLDET 459

Query: 470 LIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPA 528
           LI  LA++H+ ++ +EE SI GG G  V++ LAQ G++   +   P+ +PD   DHG PA
Sbjct: 460 LILELAQTHDRIVCIEENSICGGAGGAVLECLAQHGVVKPVL---PIGIPDTVTDHGDPA 516

Query: 529 DQLAQAGLTPSHIAATVFN 547
             L + GL+   I   + N
Sbjct: 517 LLLDKLGLSAEKIRERIAN 535


>gi|148545811|ref|YP_001265913.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1]
 gi|395446913|ref|YP_006387166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida ND6]
 gi|421524821|ref|ZP_15971442.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida LS46]
 gi|166201530|sp|A5VXW9.1|DXS_PSEP1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|148509869|gb|ABQ76729.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida F1]
 gi|388560910|gb|AFK70051.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida ND6]
 gi|402751284|gb|EJX11797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida LS46]
          Length = 631

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/549 (46%), Positives = 350/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE+VALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA SHE+
Sbjct: 505 VVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   +L      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DAAGIEASV 622


>gi|388466845|ref|ZP_10141055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas synxantha
           BG33R]
 gi|388010425|gb|EIK71612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas synxantha
           BG33R]
          Length = 632

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/563 (45%), Positives = 355/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGSLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P ++VM PSDE EL  M++T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGILVMTPSDENELRKMLST-GHLYNGPAAVRYPRGNGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G + A L +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVVRRQGSKTAFLVFGVQLAEALKVAEKLDA-----TVVDMRFVKPLDEALVREIAASHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A+V       RE L +++ 
Sbjct: 617 AGIEASV-------RERLALLAL 632


>gi|381160392|ref|ZP_09869624.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodovibrio sp. 970]
 gi|380878456|gb|EIC20548.1| 1-deoxy-D-xylulose-5-phosphate synthase [Thiorhodovibrio sp. 970]
          Length = 642

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 269/540 (49%), Positives = 346/540 (64%), Gaps = 27/540 (5%)

Query: 9   GLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTAGQAYE 68
           GLSGF KRSES YD FG GHSSTSISA LGM++   +KG +  V+AVIGDG++ AG A+E
Sbjct: 109 GLSGFPKRSESRYDTFGVGHSSTSISAALGMSIAARVKGEQRQVIAVIGDGSLGAGMAFE 168

Query: 69  AMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAK 128
           A+N+ G LD D++VILNDN ++S+         PPVGA+S  LSRL S+R    +RE +K
Sbjct: 169 ALNHGGPLDPDLLVILNDN-EMSIS--------PPVGAISRHLSRLLSSRVYTSVREGSK 219

Query: 129 GVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVAILEEVK 188
              + +    H L  + +E+ +GM+  S  T+FEE+G  YIGP+DGH++DDLVA L  +K
Sbjct: 220 TALRSMPHLRH-LVGRWEEHMKGMVMPS--TMFEEMGFNYIGPIDGHDMDDLVATLNNMK 276

Query: 189 NTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYTTYFAEA 248
                GP  +HV T+KGRGY  AE    ++HGV  FD  TG+  K  A  ++YT  F + 
Sbjct: 277 --AMPGPRFLHVSTQKGRGYEPAEGQPVQFHGVTPFDSKTGRMHKK-AGGKTYTQIFGDW 333

Query: 249 LIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPF 308
           L   AE +  ++AI  AM  G+G+  F  RFP R FDVGIAEQHAVT AAG+ACEG+KP 
Sbjct: 334 LCEAAEKEPRLLAITPAMREGSGMVAFSERFPERYFDVGIAEQHAVTLAAGMACEGMKPV 393

Query: 309 CAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMACLPNMVV 368
            AIYS+F+QRAYDQ+VHDV LQ+L V FA+DRAGLVGADG TH GSFD+++   LPN+V+
Sbjct: 394 VAIYSTFLQRAYDQLVHDVCLQRLDVTFAVDRAGLVGADGATHAGSFDLSYGRPLPNLVI 453

Query: 369 MAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGER 428
           MAP+DE E   M+ TA      P+  RYPRG G GVE+ P      L +G+G IL +GE 
Sbjct: 454 MAPADENECRRMLQTALE-HPGPAMVRYPRGCGPGVEIDPSAP--VLAIGEGEILRQGEH 510

Query: 429 VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS 488
           VALLG+G+ V     A AL     +  TVA+ RF KPLD  LI  LA  H++LIT+EE  
Sbjct: 511 VALLGFGSRV-----APALEVGEEINATVANMRFVKPLDERLILELADQHQLLITIEENV 565

Query: 489 I-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFN 547
           I GG GS V + L+  GL    V+   L LPD   +  S  +QL   GL    I   V +
Sbjct: 566 IAGGAGSAVSELLSAHGL---AVRCVHLGLPDVCQEQASHGEQLHVCGLDAPGIRDAVLS 622


>gi|422590458|ref|ZP_16665113.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280]
 gi|330877559|gb|EGH11708.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           morsprunorum str. M302280]
          Length = 631

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/547 (46%), Positives = 349/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+G +   +AVIGDGA
Sbjct: 102 MSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVAANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 TSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P       +    + 
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLNAPVSVQKKVSSP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + +   AEVD  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGQWICDMAEVDSRLVGITPAMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P +VVM PSDE EL  +++T   +   P+  RYPRG G    +       P+E+GK
Sbjct: 448 LRCIPGIVVMTPSDENELRKLLST-GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G+RVA+L +G  +     A AL+ +  L  TV D RF KPLD ALIR  A SHE
Sbjct: 505 GVVRRQGQRVAILAFGVQL-----AEALVVAEKLDATVIDMRFVKPLDEALIRETAASHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE ++ GG G+ V +FLA+  +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTLEENAVMGGAGAAVSEFLARANILKSVLH---LGLPDVYVEHAKPAQMLAECGLDV 616

Query: 539 SHIAATV 545
             I A +
Sbjct: 617 DGIEAAI 623


>gi|60616022|gb|AAX31156.1| 1-deoxy-D-xylulose 5-phosphate synthase [Zea mays]
          Length = 303

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/291 (76%), Positives = 249/291 (85%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQT GL+GF KR ES +D FG GHSSTSISA LGMAV RDL GRKN+V++VIGDGA
Sbjct: 13  MHTIRQTSGLAGFPKRDESAHDAFGVGHSSTSISAALGMAVARDLLGRKNHVISVIGDGA 72

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQAYEAMNN+GYLD++MIV+LNDNKQVSLPTATLDGP  PVGALS AL++LQS+   
Sbjct: 73  MTAGQAYEAMNNSGYLDANMIVVLNDNKQVSLPTATLDGPSKPVGALSRALTKLQSSTKF 132

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
           R LRE AK VTKQIGGP HE+AAKVDEYARGMIS SGS+LFEELGLYYIGPVDGH V+DL
Sbjct: 133 RPLREAAKSVTKQIGGPTHEVAAKVDEYARGMISASGSSLFEELGLYYIGPVDGHCVEDL 192

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V I E+VK+    GPVLIH+VTEKG+GYP AE AAD+ HGV KF+PATG+Q KS + T S
Sbjct: 193 VTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADRMHGVVKFEPATGRQLKSKSPTLS 252

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQ 291
           YT YFAE+LI EAE D+ VVAIHAAMGGGTGLN F +RFP RCFDVGIAEQ
Sbjct: 253 YTQYFAESLIREAESDEKVVAIHAAMGGGTGLNYFQKRFPERCFDVGIAEQ 303


>gi|366160335|ref|ZP_09460197.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia sp. TW09308]
 gi|432371194|ref|ZP_19614258.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE11]
 gi|430900407|gb|ELC22426.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE11]
          Length = 620

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/544 (47%), Positives = 344/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKDRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVILNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++F+ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT +Q  +       +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGTLMQEAVKV-----AESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|431800579|ref|YP_007227482.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida HB3267]
 gi|430791344|gb|AGA71539.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida HB3267]
          Length = 631

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 350/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVEFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLEPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE+VALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA SHE+
Sbjct: 505 VVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAASHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   ++      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAIMGGAGAAVGEFLASQAIV------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DAAGIEASV 622


>gi|354567520|ref|ZP_08986689.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fischerella sp. JSC-11]
 gi|353542792|gb|EHC12253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Fischerella sp. JSC-11]
          Length = 635

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/564 (44%), Positives = 350/564 (62%), Gaps = 24/564 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KRSES +D FG GH+STSISA LGMA+ RD KG K  VVA+IGDGA
Sbjct: 87  FHTLRQKDGIAGYLKRSESRFDHFGAGHASTSISAALGMALARDAKGEKFKVVAIIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN+    P          VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKMRLSGP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++  ++  +   KQI   G  +     ++ E  + +       +FEELG  Y+GPVDGHN
Sbjct: 198 VQFFKDSFEEQFKQIPFVGESLSPELGRIKEGMKRLAVPKVGAVFEELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L+A  ++    + TGPVL+HV T KG+GY  AE+    YH  + F+  TGK   SS 
Sbjct: 258 LEELIATFQQAH--QITGPVLVHVATIKGKGYEIAEQDQVGYHAQSPFNLTTGKAIPSSK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  +Y+  FA  L+  AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPAYSKVFAHTLVKLAEQNPKIIGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLA EG++P  AIYS+F+QRAYDQ++HDV +Q LPV F MDRAG+VGADGPTH G +
Sbjct: 376 LAAGLAAEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCMDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D+ ++ C+PNMV+MAP DEAEL  MV T       P   R+PRGNG GV  P   +G  P
Sbjct: 436 DIAYLRCIPNMVLMAPKDEAELQRMVVTGVNHTTGPIAMRFPRGNGYGV--PLMEEGWEP 493

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+GK  IL  G+ + +LGYGT V   +  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 494 LEIGKAEILRHGDDLLILGYGTMVHPAMQVAEILSEHGIETTVINARFAKPLDTELIFPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFGS V + L      D  V  + + +PD  ++H  P    A+
Sbjct: 554 AQKIGRVVTLEEGCVMGGFGSAVAEALLDA---DIVVPIKRIGVPDVLVEHAEPNQSKAE 610

Query: 534 AGLTPSHIAATVFN-ILGQTREAL 556
            GLT   IA  V      Q + A+
Sbjct: 611 LGLTSPQIAEKVLQAFFNQQKSAV 634


>gi|387895862|ref|YP_006326159.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           A506]
 gi|387164060|gb|AFJ59259.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           A506]
          Length = 632

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/563 (45%), Positives = 356/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+G +   +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V +  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGVTPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G + A L +G  +   L  +  +++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSKTAFLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAASHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A+V       RE L +++ 
Sbjct: 617 AGIEASV-------RERLALLNL 632


>gi|447918528|ref|YP_007399096.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas poae
           RE*1-1-14]
 gi|445202391|gb|AGE27600.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas poae
           RE*1-1-14]
          Length = 632

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/547 (46%), Positives = 350/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+++RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+G +   +AVIGDGA
Sbjct: 102 MNSLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K DP           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLDPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V +  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGVTPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  VA L +G  +   L  +  +++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSNVAFLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I  +V
Sbjct: 617 AGIETSV 623


>gi|427402584|ref|ZP_18893581.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
           45783]
 gi|425718390|gb|EKU81337.1| 1-deoxy-D-xylulose-5-phosphate synthase [Massilia timonae CCUG
           45783]
          Length = 624

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 265/547 (48%), Positives = 349/547 (63%), Gaps = 29/547 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ +GLSGF KR ESEYD FGT HSSTSISA LGMA    +KG   + +AVIGDG+
Sbjct: 88  MPTLRQLNGLSGFPKRDESEYDTFGTAHSSTSISAALGMATAARIKGEDRHAIAVIGDGS 147

Query: 61  MTAGQAYEAMNNAGYLDS-DMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG  D  +++VILNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 148 MTAGMAFEALNNAGVEDDVNLLVILNDN-DMSIS--------PPVGALNRYLARLLSGQF 198

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V K V   +  P+ +LA K++E+A+GM+  +  T+FEE G  YIGP+DGH++D 
Sbjct: 199 YAAAKNVGKSV---LPAPVLDLARKLEEHAKGMVVPA--TMFEEFGFNYIGPIDGHDLDS 253

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  LE +K  K  GP  +HVVT+KG+GY  AE     YHG  KF+   G +  ++    
Sbjct: 254 LIPTLENIKKLK--GPQFLHVVTKKGQGYKLAEAEPILYHGTGKFNHLEGIKPSTAPGKI 311

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F   L   A  DK +V I  AM  G+G+  F + +P R FDVGIAEQH+VTF AG
Sbjct: 312 TYTEVFGNWLCDMAAADKRLVGITPAMREGSGMVRFHQEYPQRYFDVGIAEQHSVTFGAG 371

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +A EGLKP  AIYS+F+QRAYDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ +
Sbjct: 372 IATEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDLAY 431

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVVMA SDE E   M+ TA      P+  RYPRG G+G ++      I  E+GK
Sbjct: 432 LRCIPNMVVMAASDENECRQMLTTAYHYPG-PAAVRYPRGAGVGAQIAEALSSI--EIGK 488

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +   G+ VALL +G+ V   L A   L++     TVA+ RF KPLD  L++ LA+ H+
Sbjct: 489 GEVRRTGKGVALLAFGSMVAPSLKAGDELDA-----TVANMRFVKPLDVELVKRLAQEHD 543

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
            L+TVEEG I GG G+ V++ LA  G+    +    L LPD +ID G P   LA  GL  
Sbjct: 544 FLVTVEEGCIMGGAGAAVMEALAAAGIAKPVLN---LGLPDNFIDQGDPQALLASVGLDA 600

Query: 539 SHIAATV 545
             IAA++
Sbjct: 601 KGIAASI 607


>gi|298245142|ref|ZP_06968948.1| deoxyxylulose-5-phosphate synthase [Ktedonobacter racemifer DSM
           44963]
 gi|297552623|gb|EFH86488.1| deoxyxylulose-5-phosphate synthase [Ktedonobacter racemifer DSM
           44963]
          Length = 645

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/572 (45%), Positives = 352/572 (61%), Gaps = 32/572 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  GLSG+ +R ES YD FG  H+STSISA LGMA  RDLKG    VVA+IGDGA
Sbjct: 89  FHTIRQFGGLSGYLRRDESPYDTFGASHASTSISAALGMAAARDLKGEDTKVVAIIGDGA 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDN-KQVSLPTATLDGPIPPVGALSSALS---RLQS 116
           +T G A EA+NNAG +  ++I++LNDN K +S            VGAL   LS   ++Q+
Sbjct: 149 LTGGMALEAINNAGSMKKNLIIVLNDNDKSIS----------DNVGALHQYLSQVRKVQT 198

Query: 117 NRPLRELREVAKGVTKQ---IGGPMHELAAKVDEYARGMISGSGS-TLFEELGLYYIGPV 172
               + LR++AKG  ++   +G    E A + +   +  +  S S  +FEELG+ + GP 
Sbjct: 199 TPSYQRLRDMAKGSIERFPVLGDKAREAAGRAETSFKQFVMHSKSGAIFEELGIKFFGPF 258

Query: 173 DGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQF 232
           DGH++  ++ + E VK+ +  GPV++ VVT+KG+G+  AE  + K+HG   +D  TG   
Sbjct: 259 DGHDIPSMLDVFENVKHIE--GPVMVQVVTKKGKGWEVAESDSTKWHGPGAYDYKTGIIK 316

Query: 233 KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQH 292
           K++    +YT  FA  L+  AE D  VV I AAM  GTGL    +RFP R FDVGIAEQH
Sbjct: 317 KNAGDPPTYTEVFANTLVEIAEKDPSVVGITAAMAEGTGLKKMHQRFPERYFDVGIAEQH 376

Query: 293 AVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHC 352
           AVTFAAG+A  G+KP  AIYS+FMQRA+DQV+HDV +Q L V FAMDRAG+VG DG T  
Sbjct: 377 AVTFAAGMATLGIKPVIAIYSTFMQRAFDQVMHDVCVQDLHVVFAMDRAGIVGEDGQTQH 436

Query: 353 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG 412
           G FD  FM  LP+M VMAP DE EL HM+ TA  +D  P   RYPRG  +G+E+   ++ 
Sbjct: 437 GVFDTAFMRILPHMKVMAPKDEEELRHMLYTAVYLDG-PVALRYPRGKALGIEM--SDEL 493

Query: 413 IPLEVGKGRILI-----EGERV--ALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 465
             LEVGK  +L      E ER   A+L YG+ V     A+  L   G++ T+ +AR+ KP
Sbjct: 494 HMLEVGKAELLSPATLEEAERTDCAILAYGSTVAQAEIAAKELAQEGIKATIVNARWAKP 553

Query: 466 LDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           LD  L   LAK+   ++T+E+  + GGFGS V++   Q GLL   ++ R + LPD+Y++H
Sbjct: 554 LDEELFLHLAKTTRRIVTIEDHVLAGGFGSAVLELFEQHGLLR-DIETRLIALPDKYVEH 612

Query: 525 GSPADQLAQAGLTPSHIAATVFNILGQTREAL 556
           G+P       GL+ +H+   V  +LG  +  L
Sbjct: 613 GAPTILKELYGLSSAHLKEVVREMLGTQQHTL 644


>gi|397698473|ref|YP_006536356.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida
           DOT-T1E]
 gi|397335203|gb|AFO51562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida
           DOT-T1E]
          Length = 631

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/549 (46%), Positives = 350/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE+VALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA SHE+
Sbjct: 505 VVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   +L      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DVAGIEASV 622


>gi|220909494|ref|YP_002484805.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cyanothece sp. PCC 7425]
 gi|254782069|sp|B8HWL8.1|DXS_CYAP4 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|219866105|gb|ACL46444.1| deoxyxylulose-5-phosphate synthase [Cyanothece sp. PCC 7425]
          Length = 632

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/562 (46%), Positives = 347/562 (61%), Gaps = 45/562 (8%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+  R ESE+D FG GH+STSISA LGMA+ RD +G  + VVA+IGDGA+
Sbjct: 88  HTLRQKDGVAGYLNRKESEFDHFGAGHASTSISAALGMALARDQRGETHKVVAIIGDGAL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G + EA+N+AG+L  ++++V+LNDN+    P          VGALS  L++++ N  +
Sbjct: 148 TGGMSLEAINHAGHLPHTNLMVVLNDNEMSISPN---------VGALSRYLNKMRLNPQV 198

Query: 121 RELRE---------VAKGVTKQIG---GPMHELAA-KVDEYARGMISGSGSTLFEELGLY 167
           + + E         V   +T ++G   G M  LA  KV              +FEELG  
Sbjct: 199 QFITENLEEQIKHFVGDSITPELGRLKGGMKRLAVPKV------------GAVFEELGFT 246

Query: 168 YIGPVDGHNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA 227
           Y+GPVDGHN+++L+A        K  GPVL+HV T KG+GY  AEK    YH    F+ A
Sbjct: 247 YVGPVDGHNLEELIATFNAAH--KIPGPVLVHVATVKGKGYAIAEKDQVGYHAQNPFNLA 304

Query: 228 TGKQFKSSA-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDV 286
           TGK   SS  +  SY+  F + L   AE D  ++ I AAM  GTGL++  +  P +  DV
Sbjct: 305 TGKAMPSSKPKPPSYSKVFGDTLTKLAEADSRIIGITAAMATGTGLDILQKHLPDQYIDV 364

Query: 287 GIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGA 346
           GIAEQHAVT AAGLACEG++P   IYS+F+QRAYDQ+VHDV +Q LPV F MDRAG+VGA
Sbjct: 365 GIAEQHAVTMAAGLACEGMRPVVTIYSTFLQRAYDQIVHDVCIQSLPVLFCMDRAGIVGA 424

Query: 347 DGPTHCGSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL 406
           DGPTH G +D+ ++ CLPNMV+MAP DEAEL  M+ T     D P   RYPRGNG GV L
Sbjct: 425 DGPTHQGMYDIAYLRCLPNMVLMAPKDEAELQQMLVTGINYMDGPIGLRYPRGNGYGVAL 484

Query: 407 PPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKP 465
               +G  PL +GK  +L +G+ + +L YG+ V   L A+ +L  +G+  TV +ARF KP
Sbjct: 485 --MEEGWEPLPIGKAEVLRQGDDLLMLAYGSMVYPTLQAAEILREHGIAATVVNARFAKP 542

Query: 466 LDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
           LD  LI  LA+    ++TVEEG  IGGFGS V++ L    +L   V    + +PD  ++H
Sbjct: 543 LDTELILPLAEKLGRVVTVEEGCLIGGFGSAVLEALQDQEIL---VPVTRIGIPDILVEH 599

Query: 525 GSPADQLAQAGLTPSHIAATVF 546
            +P    AQ GLT + IA  V 
Sbjct: 600 ATPDQSKAQLGLTSAQIAERVL 621


>gi|70732811|ref|YP_262578.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas protegens
           Pf-5]
 gi|118595604|sp|Q4K5A5.1|DXS_PSEF5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|68347110|gb|AAY94716.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas protegens
           Pf-5]
          Length = 633

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/548 (47%), Positives = 351/548 (64%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVG 418
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G      P +K + P+E+G
Sbjct: 448 LRCIPGMLVMTPSDENELRMMLST-GHLYNGPAAVRYPRGTGPNA---PIDKSLEPIEIG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG I  +G +VALL +G  +     A AL  +  L  TV D RF KPLD AL+R +A SH
Sbjct: 504 KGVIRRQGRQVALLVFGVQL-----AEALQVAEKLDATVVDMRFVKPLDEALVREIASSH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+T+EE +I GG G  V ++LA++ +L   +    L LPD Y++H  PA  LA+ GL 
Sbjct: 559 ELLVTIEENAIMGGAGGAVSEYLARENILKPILH---LGLPDAYVEHAKPAQMLAECGLD 615

Query: 538 PSHIAATV 545
            + I A+V
Sbjct: 616 EAGIEASV 623


>gi|299066177|emb|CBJ37361.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Ralstonia solanacearum CMR15]
          Length = 636

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/554 (46%), Positives = 353/554 (63%), Gaps = 32/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+SGF +RSES YD FGT HSSTSISA LGMA+G   +G     +AVIGDGA
Sbjct: 90  MATLRQLDGISGFPRRSESPYDTFGTAHSSTSISAALGMALGAKTQGENRVAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG Y +  ++V+LNDN  +S+         PPVGAL+   +RL S + 
Sbjct: 150 MSAGMAFEAMNNAGVYRNLPLVVVLNDN-DMSIS--------PPVGALNRYFARLMSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KGV K   +  P+ E A + +E+A+GM+  +  T+FEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGVEKLLSVAPPVLEFAKRFEEHAKGMLVPA--TMFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNTKTTG--PVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L+ ++     G  P  +HVVT+KG+GY  AE     YHG  KF+P  G +  + 
Sbjct: 256 ESLVPTLQNIRQRALEGGRPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPQEGIKPAAR 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               SYT  F + L   A  DK +V I  AM  G+G+  F RRFP R +DVGIAEQHAVT
Sbjct: 316 PAKVSYTQVFGQWLCDMAAADKRLVGITPAMREGSGMVEFERRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM P+DE E   +++TA A    P+  RYPRG G G  + P  + +P+
Sbjct: 436 DIAYLRCIPNMMVMVPADENECRQLLSTAFA-QACPTAVRYPRGAGTGAAVQPTLEPLPV 494

Query: 416 ---EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
              EV +      G+RVA+L +G+ V    AA+  L++     TV + RF KPLD A + 
Sbjct: 495 GKAEVRRASTAPAGQRVAILAFGSMVAPAAAAAERLDA-----TVVNMRFVKPLDAACVL 549

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            +A++H+ ++TVEEG + GG GS  ++ LA  G+    ++   L LPDR++DHG  A  L
Sbjct: 550 EMARTHDYVVTVEEGCVMGGAGSACLEALAAAGVATPVLQ---LGLPDRFVDHGDHAALL 606

Query: 532 AQAGLTPSHIAATV 545
           A  GL  + I A++
Sbjct: 607 ALCGLDANGILASI 620


>gi|332531500|ref|ZP_08407402.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hylemonella gracilis ATCC
           19624]
 gi|332039052|gb|EGI75476.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hylemonella gracilis ATCC
           19624]
          Length = 641

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/555 (47%), Positives = 348/555 (62%), Gaps = 35/555 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  G+SGF  RSES YD FGT HSSTSISA LGMA+    KG   + +AVIGDGA
Sbjct: 90  MGSLRQLGGISGFPLRSESAYDVFGTAHSSTSISAALGMALAARQKGEDRHAIAVIGDGA 149

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+N+ G  D  ++VILNDN  +S+         PPVGAL+  L++L S R  
Sbjct: 150 MTAGMAFEALNHGGVEDCRLLVILNDN-DMSIS--------PPVGALNRYLAQLMSGRFY 200

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
              ++V K V K    P+ ELA +++E A+GM+  +  TLFE+ G  YIGP+DGH++D L
Sbjct: 201 SAAKQVGKSVLKA-APPLFELAKRLEEQAKGMVVPA--TLFEKFGFNYIGPIDGHDLDSL 257

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  + +GP  +HVVT+KG+GY  AE     YHG  KFDPA G    ++   Q+
Sbjct: 258 IPTLENIK--QLSGPQFLHVVTKKGQGYKLAEADPVAYHGPGKFDPAVGLVKPTTPPKQT 315

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           +T  F + L   AE D  +V I  AM  G+G+  F +RFP R +DVGIAEQHAVT AAG+
Sbjct: 316 FTQVFGQWLCDMAEQDMRLVGITPAMREGSGMVEFHQRFPGRYYDVGIAEQHAVTLAAGM 375

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG+KP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G+FD+ F+
Sbjct: 376 ACEGIKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAFDIPFL 435

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM V  P+DE E   +++TA A  + P   RYPRG G GV   P +   PL  GK 
Sbjct: 436 RCIPNMAVACPADERECRQLLSTAYA-QNHPVAVRYPRGAGAGVA--PLSDLEPLPYGKS 492

Query: 421 ---RILIEGER------VALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALI 471
              R    GE       +A+L +GT +   L A+  L++     TV + R+ KPLD  ++
Sbjct: 493 EVRRWRAGGESEATKRGIAILAFGTLLYPALEAAEKLDA-----TVVNMRWAKPLDTDML 547

Query: 472 RSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQ 530
           R +A  HE L+TVEEG + GG GS V + L   GL   ++    L LPDR+I+HG PA  
Sbjct: 548 RDVAARHEALVTVEEGVVMGGAGSAVSEALQAAGL---SMPLLQLGLPDRFIEHGDPAKL 604

Query: 531 LAQAGLTPSHIAATV 545
           LA  GL  + I   +
Sbjct: 605 LALQGLDATGIEGAI 619


>gi|334137128|ref|ZP_08510573.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paenibacillus sp. HGF7]
 gi|333605326|gb|EGL16695.1| 1-deoxy-D-xylulose-5-phosphate synthase [Paenibacillus sp. HGF7]
          Length = 633

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/557 (45%), Positives = 349/557 (62%), Gaps = 24/557 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+R+  G+ GF KR+ES++D +  GHSSTS+SA +GMA+ RDLKG    V AVIGDGAMT
Sbjct: 89  TLRKYKGMCGFIKRAESDHDVWEAGHSSTSLSAAMGMAMARDLKGEDFRVFAVIGDGAMT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A EAMN+ G+   ++ VILNDN+    P          VGA+ + LS+++S++  R+
Sbjct: 149 GGMALEAMNHIGHEKKNLTVILNDNEMSIAPN---------VGAIHNYLSKIRSDKHYRK 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            +E  + + K+I   GG + + A KV D     ++SG     FEELG  YIGPVDGHN+ 
Sbjct: 200 AKEEVESLLKKIPAIGGTLAKTAEKVKDSLKYLLVSG---VWFEELGFNYIGPVDGHNLP 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+  L++  + K  GPVLIHV+T KG+GY  AE  + K+HG + +   +G QF  +   
Sbjct: 257 LLLETLKQ--SEKVEGPVLIHVITTKGKGYSPAEMDSHKWHGASPYKIESG-QFLKAVGN 313

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
             YT  F   LI  AE D+ VVA+  AM GG+GL  F  RFP R  DVGIAEQHA T  A
Sbjct: 314 PMYTEVFGNTLIELAEKDERVVAVTPAMPGGSGLMNFAARFPKRMIDVGIAEQHAATLCA 373

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EG+KP  A+YS+F+QRAYDQVVHD+   KL V FA+DRAG VG DG TH G +D+ 
Sbjct: 374 GMAAEGMKPVFAVYSTFLQRAYDQVVHDICRPKLNVMFAIDRAGFVGPDGETHQGVYDIA 433

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  LPNMV+M P DE EL  M+ T    ++ P   RY R NG+GV +    + IP  +G
Sbjct: 434 FLRNLPNMVLMMPKDENELRRMMRTGIDYNEGPIAVRYARINGLGVPMDENPQPIP--IG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
               L EG+ +A+L  G   Q  L A+ +L   G+ L V +ARF KPLD A++  LAK H
Sbjct: 492 TWETLTEGDTMAVLAVGPMNQVALEAADMLRKEGINLRVINARFIKPLDEAMLLQLAKEH 551

Query: 479 EVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             +IT+EEGS  GGFGS V++F A+ G ++G V+ R + +PD +++HGS  +Q  + GLT
Sbjct: 552 MPIITMEEGSEQGGFGSAVLEFYAKQG-IEG-VRVRTMGVPDYFVEHGSIKEQRQEVGLT 609

Query: 538 PSHIAATVFNILGQTRE 554
             H+   V  +L + R+
Sbjct: 610 AEHLITQVHTLLPRKRQ 626


>gi|317128431|ref|YP_004094713.1| deoxyxylulose-5-phosphate synthase [Bacillus cellulosilyticus DSM
           2522]
 gi|315473379|gb|ADU29982.1| deoxyxylulose-5-phosphate synthase [Bacillus cellulosilyticus DSM
           2522]
          Length = 629

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/557 (46%), Positives = 354/557 (63%), Gaps = 25/557 (4%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +RQ  GL GF KRSESE+D + TGHSSTS+SA +GMA  RDLKG  +NVVA+IGDGA+T 
Sbjct: 90  LRQYKGLCGFPKRSESEHDVWETGHSSTSLSAAMGMATARDLKGTDDNVVAIIGDGALTG 149

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLREL 123
           G A EA+N+ G+   D+IV+LNDN ++S+         P VGAL + L R+++    ++ 
Sbjct: 150 GMALEALNHIGHEQKDLIVVLNDN-EMSIA--------PNVGALHNVLGRMRTAGRYQKA 200

Query: 124 REVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           +E  + + K+I   GG +   A +V D     ++SG     FEELG  Y+GPVDGH++DD
Sbjct: 201 KEDLEMLIKKIPAFGGRLAATAERVKDSLKYLLVSG---MFFEELGFTYLGPVDGHDLDD 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAAD-KYHGVAKFDPATGKQFKSSART 238
           L   ++  K TK  GPVL+HV+T+KG+GY  AE  A   +HG+  +   +G+  K     
Sbjct: 258 LTTNMKYAKKTK--GPVLVHVITKKGKGYAPAENDAKGTWHGLGPYKMESGEVVKKPG-P 314

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SY+  FAE L   A  D  VVA+ AAM GGT L++F + FP R FDVGIAEQHA T AA
Sbjct: 315 PSYSGVFAETLKKVAHEDNRVVALTAAMPGGTKLDVFGKEFPDRMFDVGIAEQHATTMAA 374

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA +G+KP  A+YS+F+QR YDQVVHDV  Q L V FA+DRAGLVGADG TH G FD++
Sbjct: 375 GLATQGMKPVFAVYSTFLQRGYDQVVHDVCRQNLNVVFAIDRAGLVGADGETHQGVFDIS 434

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++  LPNM ++ P DE EL HMV TA   DD P   RYPRGNG G+++    K +P  +G
Sbjct: 435 YLRHLPNMTILMPKDENELQHMVYTALKYDDGPIAVRYPRGNGFGIQMDETLKTLP--IG 492

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K  ++ EG  + +L +GT +   +AA+  L   G+ + V +AR  KPLD  ++  LA  +
Sbjct: 493 KWEVMEEGSDLTILTFGTMIPIAIAAADQLSKEGIHVEVVNARSIKPLDGEMLNDLAVKN 552

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             +IT+EEG++ GGFGS V+++L ++     +V    L +PDR+I+HGS    L + GLT
Sbjct: 553 RPIITLEEGALQGGFGSAVLEYLHENN--HHSVVVERLGIPDRFIEHGSVNQLLEEVGLT 610

Query: 538 PSHIAATVFNILGQTRE 554
                  V  +L + R+
Sbjct: 611 ADETVRRVKQLLPKKRQ 627


>gi|409990170|ref|ZP_11273586.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arthrospira platensis str.
           Paraca]
 gi|291569715|dbj|BAI91987.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arthrospira platensis
           NIES-39]
 gi|409938971|gb|EKN80219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Arthrospira platensis str.
           Paraca]
          Length = 638

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/551 (45%), Positives = 351/551 (63%), Gaps = 23/551 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           +T+RQ DG++G+ KR ES +D FG GH+STSISA LGMA+ RD++G    VVA+IGDGAM
Sbjct: 88  NTLRQKDGVAGYLKRCESRFDHFGAGHASTSISAALGMALARDMQGDNYKVVAIIGDGAM 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L +++++V+LNDN ++S+         P VGA+   L++++ + P+
Sbjct: 148 TGGMALEAINHAGHLPNTNLMVVLNDN-EMSIS--------PNVGAIPRYLNKMRLSPPV 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL---FEELGLYYIGPVDGHNV 177
           + L++  +   KQI         +++    GM   +   L    EELG  YIGPVDGHN+
Sbjct: 199 QFLKDNLREQFKQIPFVGENFTPEMERLKEGMKRLAVPKLGAIIEELGFTYIGPVDGHNL 258

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA- 236
           +DL+   ++    K  GPV++HV T KG+GY  AEK    YH  + F+ ATGK   S+  
Sbjct: 259 EDLIETFQQAHEIK--GPVMVHVSTVKGKGYAIAEKDQVGYHAQSPFNLATGKAIPSNKP 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +  SY+  FA+ LI  AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAVT 
Sbjct: 317 KPPSYSKVFADTLIKLAEDNPKILGITAAMATGTGLDKLQAKLPQQYIDVGIAEQHAVTL 376

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLACEG++P  AIYS+F+QRAYDQ++HDV +QKLPV F +DRAG+VG DGPTH G +D
Sbjct: 377 AAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGIVGVDGPTHQGMYD 436

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PL 415
           + ++ CLPNM +MAP DEAEL  M+ T    +      RYPRG+G GV  P   +G  P+
Sbjct: 437 IAYLRCLPNMTIMAPKDEAELQRMLVTGINHNSGAIAMRYPRGSGHGV--PLMEEGWEPI 494

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            +GKG IL +G+ + LLGYGT V S +  + +L  +G+  TV +ARF KPLD  LI  LA
Sbjct: 495 AIGKGEILRQGDDILLLGYGTMVHSAMQVAEILSEHGIDATVVNARFVKPLDTELIVPLA 554

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           +    ++T+EEG I GGFGS V + L    +L   V  +   +PD+ +DH +P       
Sbjct: 555 QKIGKVVTLEEGCIMGGFGSAVAEALLDHDVL---VPVKRFGIPDQLVDHATPDQSKVDL 611

Query: 535 GLTPSHIAATV 545
           GLT S IA  +
Sbjct: 612 GLTSSQIAEQI 622


>gi|333370563|ref|ZP_08462558.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desmospora sp. 8437]
 gi|332977572|gb|EGK14342.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desmospora sp. 8437]
          Length = 628

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/557 (45%), Positives = 350/557 (62%), Gaps = 24/557 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL GF K +ESE+D + TGHSSTS+SA +GMAV RDLKG  + V+ +IGDGA+T
Sbjct: 89  TLRQYKGLCGFPKMAESEHDIWETGHSSTSLSAAMGMAVARDLKGEDHRVIPIIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A EA+N+ G    +++VILNDN ++S+         P VGA+ + L +L+++R   +
Sbjct: 149 GGMALEALNHIGNEKRNIMVILNDN-EMSIS--------PNVGAIHNYLGKLRTHRHYHK 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           L+E  +   K+I   GG     A ++ +  + ++      LFE+LG  Y+GPV GHN+D+
Sbjct: 200 LKEEVEYFLKKIPSVGGAFATAAERIKDSMKFLVVSG--VLFEKLGFTYLGPVSGHNLDE 257

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAK-FDPATGKQFKSSART 238
           L+  L     TK  GPVL+HVVT KG+GY  AE  A+K+HGV+K +     K+ K     
Sbjct: 258 LMECLRLADQTK--GPVLVHVVTVKGKGYLPAEAQAEKFHGVSKGYKLEANKEAKKETPV 315

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
           + Y   F + LI  AE DK VV +  AM GG+G+N F  +FP RCFDVGIAEQHA TFAA
Sbjct: 316 K-YAKVFGDTLIQLAETDKRVVGVTPAMLGGSGMNEFASKFPDRCFDVGIAEQHAGTFAA 374

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA +G+KP  AIYS+F+QRAYDQV+HD+  Q L V  A+DRAG VGADG TH G +D+ 
Sbjct: 375 GLATQGMKPVLAIYSTFLQRAYDQVIHDIARQNLNVVLAVDRAGFVGADGETHQGIYDIA 434

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           ++ C+PN+VVM P DE E  HM+ TA   D  P   R+PRG GIGVE+ P  K +P  +G
Sbjct: 435 YLRCIPNLVVMMPKDENEFRHMLYTAYRTDG-PIAVRFPRGTGIGVEMDPELKELP--IG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K  +L EG  VALL +GT V   L A+  L + G+   V + RF KPLD  L+  L    
Sbjct: 492 KSEVLREGGDVALLAFGTMVPLALEAAERLANEGVEAKVVNVRFAKPLDTELLDRLKMEG 551

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             ++T+EEG + GGFGS V+++ +  G  D  V  + + +PD +++HG   DQL++ GLT
Sbjct: 552 TPVVTIEEGCVSGGFGSAVLEYFS--GREDSGVPVQIMGVPDYFVEHGDVNDQLSEVGLT 609

Query: 538 PSHIAATVFNILGQTRE 554
             +I      I+   R+
Sbjct: 610 VENIVQNAHQIIADHRQ 626


>gi|260887336|ref|ZP_05898599.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
 gi|260862972|gb|EEX77472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
          Length = 634

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/556 (46%), Positives = 342/556 (61%), Gaps = 25/556 (4%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +RQ  G++GF KR ES YD FGTGHSSTSISA LGMA  RD+ G +  + AVIGDGA+T 
Sbjct: 94  LRQKGGITGFPKREESVYDAFGTGHSSTSISAALGMAAARDIAGEQYRIAAVIGDGALTG 153

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQ----SNRP 119
           G+A+E +NNAG L  D+IVILNDN     P          VGA+S  LSR +     +R 
Sbjct: 154 GEAFEGLNNAGTLGKDIIVILNDNGMSIAPN---------VGAMSEYLSRFRVAPGYHRA 204

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            ++++   K +   IG  ++  A  + +  R  +   G  LF ++G +YIGP+DGHN+  
Sbjct: 205 KQDIKNFLKSIP-HIGERVYRTAEHIKDGVRSALVPGG--LFTDMGFHYIGPLDGHNIAL 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ + E+ K  K  GP+LIHV T KG+GY  AEKA DK+HG+ +FD A G   K +    
Sbjct: 262 LLDVFEQAKQLK--GPLLIHVETCKGKGYAPAEKAPDKFHGIGRFDVADGTTLKKAGAKP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT+ F +AL+  AE D DVVAI AAM  GTGL  F  ++PTR FDVGIAEQHA TFAAG
Sbjct: 320 TYTSVFGKALLEAAEEDADVVAITAAMPDGTGLRTFGEKYPTRFFDVGIAEQHATTFAAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA  G KP  A+YS+F QRAYDQ++HDV LQ L V FA+DRAG VG DG TH G FD ++
Sbjct: 380 LAAAGRKPVLALYSTFAQRAYDQILHDVCLQNLHVVFALDRAGFVGEDGATHHGVFDYSY 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LPNM V+AP DE EL  M+ TA +++  P   RYPRG GIG  L       PLE   
Sbjct: 440 LRHLPNMKVLAPKDENELGRMLKTALSLEG-PVALRYPRGEGIGAALE--EPFTPLESLA 496

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
             +L E   +ALL  G+ V +    + LL+ +GL   V + R  KPLD  L+  +A   +
Sbjct: 497 AEVLEEEGEIALLAVGSMVDAAQKTAKLLKEDGLSAAVVNMRTVKPLDEELLHRMAHEKK 556

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE ++ GGFGS V++ LA  GLL   V++    + D +I+ G P + L  AGL P
Sbjct: 557 MLVTMEENALAGGFGSAVLEALADAGLLIPVVRFG---IGDAFIEQGKPQELLEMAGLQP 613

Query: 539 SHIAATVFNILGQTRE 554
             +A ++       R+
Sbjct: 614 EQMARSILTAWKGARD 629


>gi|330812002|ref|YP_004356464.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380110|gb|AEA71460.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 632

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/547 (46%), Positives = 346/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGQWLCDMAAADPRLVGITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T    +  P+  RYPRG G     P      P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLTTGHLFNG-PAAVRYPRGTGPNA--PISTDLEPIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G++ ALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SH+
Sbjct: 505 GVIRRQGKQTALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREMAGSHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDSYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
             I A V
Sbjct: 617 VGIEAAV 623


>gi|427731634|ref|YP_007077871.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nostoc sp. PCC 7524]
 gi|427367553|gb|AFY50274.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nostoc sp. PCC 7524]
          Length = 635

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 248/553 (44%), Positives = 347/553 (62%), Gaps = 23/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR E+++D FG GH+STSISA LGMA+ RD+ G K  V AVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCENQFDHFGAGHASTSISAALGMALARDMNGEKFKVAAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN+    P          VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKMRLSPP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ +++  +   K I   G  +     ++ E  + +       +FEELG  Y+GPVDGHN
Sbjct: 198 VQFIKDNFEEQFKHIPFVGESLSPELGRIKEGMKRLAVPKVGAVFEELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L+   ++    +  GPVL+HVVT KG+GY  AEK    YH    F+  TGK   SS 
Sbjct: 258 LEELITTFQQAH--QIAGPVLVHVVTVKGKGYEIAEKDQVGYHAQNPFNLTTGKAIPSSK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  +Y   F+  L+  AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPAYAKVFSHTLVKLAEQNPKIIGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-P 414
           D+ ++ C+PNMV+MAP DEAEL  M+ T       P   R+PRGNG GV  P   +G  P
Sbjct: 436 DIAYLRCIPNMVLMAPKDEAELQRMIVTGINHTSSPIAMRFPRGNGYGV--PLMEEGWEP 493

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           LE+GKG IL  G+ V ++GYGT V   L A+ +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 494 LEIGKGEILRNGDDVLIVGYGTMVYPSLQAAEILSEHGIEATVINARFVKPLDTELIVPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           AK    ++T+EEG + GGFGS V + L      D  V  + + +PD  ++H +P +  A+
Sbjct: 554 AKKIGRVVTLEEGCVMGGFGSAVAEALLD---ADVVVPVKRIGIPDVLVEHATPDESKAE 610

Query: 534 AGLTPSHIAATVF 546
            GLT   IA  V 
Sbjct: 611 LGLTSRQIAERVL 623


>gi|330838911|ref|YP_004413491.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
 gi|329746675|gb|AEC00032.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sputigena ATCC
           35185]
          Length = 632

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/556 (46%), Positives = 342/556 (61%), Gaps = 25/556 (4%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +RQ  G++GF KR ES YD FGTGHSSTSISA LGMA  RD+ G +  + AVIGDGA+T 
Sbjct: 92  LRQKGGITGFPKREESVYDAFGTGHSSTSISAALGMAAARDIAGEQYRIAAVIGDGALTG 151

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQ----SNRP 119
           G+A+E +NNAG L  D+IVILNDN     P          VGA+S  LSR +     +R 
Sbjct: 152 GEAFEGLNNAGTLGKDIIVILNDNGMSIAPN---------VGAMSEYLSRFRVAPGYHRA 202

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            ++++   K +   IG  ++  A  + +  R  +   G  LF ++G +YIGP+DGHN+  
Sbjct: 203 KQDIKNFLKSIP-HIGERVYRTAEHIKDGVRSALVPGG--LFTDMGFHYIGPLDGHNIAL 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ + E+ K  K  GP+LIHV T KG+GY  AEKA DK+HG+ +FD A G   K +    
Sbjct: 260 LLDVFEQAKQLK--GPLLIHVETCKGKGYAPAEKAPDKFHGIGRFDVADGTTLKKAGAKP 317

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT+ F +AL+  AE D DVVAI AAM  GTGL  F  ++PTR FDVGIAEQHA TFAAG
Sbjct: 318 TYTSVFGKALLEAAEEDADVVAITAAMPDGTGLRTFGEKYPTRFFDVGIAEQHATTFAAG 377

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA  G KP  A+YS+F QRAYDQ++HDV LQ L V FA+DRAG VG DG TH G FD ++
Sbjct: 378 LAAAGRKPVLALYSTFAQRAYDQILHDVCLQNLHVVFALDRAGFVGEDGATHHGVFDYSY 437

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LPNM V+AP DE EL  M+ TA +++  P   RYPRG GIG  L       PLE   
Sbjct: 438 LRHLPNMKVLAPKDENELGRMLKTALSLEG-PVALRYPRGEGIGAALE--EPFTPLESLA 494

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
             +L E   +ALL  G+ V +    + LL+ +GL   V + R  KPLD  L+  +A   +
Sbjct: 495 AEVLEEEGEIALLAVGSMVDAAQKTAKLLKEDGLSAAVVNMRTVKPLDEELLHRMAHEKK 554

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE ++ GGFGS V++ LA  GLL   V++    + D +I+ G P + L  AGL P
Sbjct: 555 MLVTMEENALAGGFGSAVLEALADAGLLIPVVRFG---IGDAFIEQGKPQELLEMAGLQP 611

Query: 539 SHIAATVFNILGQTRE 554
             +A ++       R+
Sbjct: 612 EQMARSILTAWKGARD 627


>gi|417845648|ref|ZP_12491674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21639]
 gi|341954717|gb|EGT81190.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus haemolyticus
           M21639]
          Length = 625

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/554 (45%), Positives = 351/554 (63%), Gaps = 30/554 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVG--RDLKGRKNNVVAVIGD 58
           M T+RQ +G+  F  R ESE+D    GHSSTSISAGLG+AV   R+  GRK   V +IGD
Sbjct: 95  MSTIRQKNGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENAGRK--TVCIIGD 152

Query: 59  GAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR 118
           GA+TAG A+EA+N+AG + +DM+VILNDN ++S+           VGAL++ L+R+ S  
Sbjct: 153 GAITAGMAFEALNHAGSVHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGS 203

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
               LR+ +K +  ++  P+     K +E+ +G++    STLFEE G  YIGPVDGHN+D
Sbjct: 204 IYSTLRDGSKKILDKVP-PVKNFMKKTEEHMKGVMFSPESTLFEEFGFNYIGPVDGHNID 262

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
           +LVA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K + + 
Sbjct: 263 ELVATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKHNTKP 320

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA 
Sbjct: 321 -TYSKIFGDWLCEMAEKDSKIIGITPAMREGSGMVEFSQRFPEQYFDVAIAEQHAVTFAT 379

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADGPTH G+FD++
Sbjct: 380 GLAIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLS 439

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM C+PNM++M PSDE E   M+ T      +P+  RYPRGN IGV+L P      L +G
Sbjct: 440 FMRCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAIGVKLTPLEM---LPIG 495

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K R++ EG+++A+L +GT + S L AS  L +     TV D RF KP+D  +I  LA++H
Sbjct: 496 KSRLIREGQKIAILNFGTLLPSALEASEKLNA-----TVVDMRFVKPIDIEMINVLAQTH 550

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           + L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + L    L 
Sbjct: 551 DYLVTLEENAIQGGAGSAVAEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALKDLELD 607

Query: 538 PSHIAATVFNILGQ 551
              I   + N + +
Sbjct: 608 SKGIEEKILNFIAK 621


>gi|398969623|ref|ZP_10682973.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM30]
 gi|398141760|gb|EJM30671.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM30]
          Length = 632

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/548 (46%), Positives = 348/548 (63%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 METLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSAVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVG 418
           + C+P MV+M PSDE EL  M+ T   + + P+  RYPRG G    +   +K + P+E+G
Sbjct: 448 LRCIPGMVIMTPSDENELRKML-TTGHLYNGPAAVRYPRGTGPNATI---DKDLEPIEIG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  +G  VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SH
Sbjct: 504 KGIVRRQGSNVALLVFGVQLSEALKVAEKLDA-----TVVDMRFVKPLDEALVREIAGSH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL 
Sbjct: 559 ELLVTIEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLD 615

Query: 538 PSHIAATV 545
            + I A V
Sbjct: 616 EAGIEAAV 623


>gi|357038610|ref|ZP_09100407.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
           DSM 7213]
 gi|355359402|gb|EHG07164.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfotomaculum gibsoniae
           DSM 7213]
          Length = 639

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/559 (46%), Positives = 358/559 (64%), Gaps = 27/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            +T+R   GLSGF +  ESE+D F TGHSSTSISA LGMA+ RDLKG +  VVAVIGDG+
Sbjct: 89  FYTLRCHGGLSGFPRPDESEHDAFATGHSSTSISAALGMALARDLKGDRYAVVAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSN--- 117
           MT G AYEA+N+AG+L  D+IV+LNDNK +S+           VGA+S  L+R++++   
Sbjct: 149 MTGGMAYEALNHAGHLKKDLIVVLNDNK-MSISAN--------VGAMSGYLNRMRTDPKY 199

Query: 118 -RPLRELREVAKGVTKQIGGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGH 175
            R   E+ ++ + +   IG  + ++A ++ D +   ++ G    +FEE+G  Y+GP+DGH
Sbjct: 200 SRGKDEIEQILRRI-PSIGSTVVKVAERLKDSFKYLVVPG---MIFEEMGFTYLGPIDGH 255

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+  ++   E+ K+    GPVL+HVVTEKG GY  A + ADK+HG+  FD ++G   K S
Sbjct: 256 NMLSMLNTFEQAKSLG--GPVLVHVVTEKGCGYAPAVEKADKFHGIGPFDISSGNCLKKS 313

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               +YT  F   L+  AE D  VV I AAM  GTGLN F ++FP+R FDVGIAEQHAVT
Sbjct: 314 -DISTYTEIFGRTLVKLAEQDPAVVGITAAMCSGTGLNEFAKKFPSRFFDVGIAEQHAVT 372

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLA +G KP  A+YS+F+QRAYDQ++HDV LQKLPV FA+DR+G+VG DGPTH G F
Sbjct: 373 MAAGLATQGYKPVVAVYSTFLQRAYDQIIHDVCLQKLPVVFAVDRSGIVGDDGPTHHGLF 432

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D++++   P+M +MAP+DE EL HM+ TA  ++  P   RYPRG G+GV L   ++ +P 
Sbjct: 433 DISYLRSAPHMTIMAPADENELQHMLHTALQVNG-PCAVRYPRGTGLGVALDLHSRALP- 490

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            VG+  +L+EG+ + LL  G  V     A+ +L+  G+  TV +ARF KPLD   I   A
Sbjct: 491 -VGQAEVLVEGKDITLLAVGNMVPVARRAAVMLKERGVLATVINARFIKPLDDECITRWA 549

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
                LIT+EE ++ GGFGS V+Q LA   +    VK   + + D +I+HG  +      
Sbjct: 550 ARTGRLITIEENTLAGGFGSAVLQLLAAKEMPGIQVKC--VGIEDVFIEHGGQSLLRKNY 607

Query: 535 GLTPSHIAATVFNILGQTR 553
           GLTP +I      ++G  +
Sbjct: 608 GLTPENIMNLAMQMIGSRK 626


>gi|88799590|ref|ZP_01115166.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea blandensis
           MED297]
 gi|88777675|gb|EAR08874.1| 1-deoxy-D-xylulose-5-phosphate synthase [Reinekea sp. MED297]
          Length = 626

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/549 (46%), Positives = 345/549 (62%), Gaps = 27/549 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD FG GHSSTSISA LGMA+    KG     VAVIGDGA+T
Sbjct: 103 TIRQEGGLHAFPHRGESEYDTFGVGHSSTSISAALGMAIADRRKGNARQTVAVIGDGALT 162

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EA+N+AG+  ++M+V+LNDN  +S+           VGAL+ A +R+ S++    
Sbjct: 163 AGMAFEALNHAGHDGANMLVVLNDND-MSISEN--------VGALNKAFARVFSSKTYSH 213

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE +K V K +  PM E A K +E+ +GM++    TLFEELG  Y+GPVDGH+V DLV 
Sbjct: 214 LRENSKKVLKNLP-PMLEFARKAEEHMKGMVAPG--TLFEELGFNYVGPVDGHDVIDLVQ 270

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ ++    +GP  +HV T+KG+G+  AE    KYH + K +P + +Q  ++A    Y+
Sbjct: 271 TLQNIRTF--SGPQFLHVATQKGKGFIPAENEPIKYHAITKIEPQS-EQAGAAAAKPKYS 327

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D+ ++ +  AM  G+ L  F   +P R  DV IAEQHAVT A G+AC
Sbjct: 328 NVFGQWLCDMAARDERLLGVTPAMREGSDLVAFSSLYPERYHDVAIAEQHAVTVAGGMAC 387

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
           EG+KP  AIYS+F+QRAYDQ++HD+ LQ L V FA+DRAGLVG DGPTH GSFD T++ C
Sbjct: 388 EGMKPVVAIYSTFLQRAYDQLIHDIALQNLDVLFAIDRAGLVGEDGPTHAGSFDYTYLRC 447

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +PNMVVMAP DEAE   M+ T       P+  RYPRG G GV++P   +   L++G+   
Sbjct: 448 IPNMVVMAPKDEAECRAMLTTGYEYPG-PAAVRYPRGTGPGVDIPKTLEA--LQIGQSET 504

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
           L EG R+A+L +G+ V+ C   +  L++     T+ + RF KPLD   +  LA+SHE+L+
Sbjct: 505 LREGRRIAILAFGSMVEPCRQVAEALDA-----TLVNMRFIKPLDQDRVIQLAQSHELLV 559

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L Q+ L   T     L LPD YIDH  PA  L+Q GL  + I
Sbjct: 560 TVEENAIMGGAGSAVTETLNQNQL---TCACLQLGLPDAYIDHAKPARMLSQVGLDATGI 616

Query: 542 AATVFNILG 550
              +   LG
Sbjct: 617 QQAIERRLG 625


>gi|386265886|ref|YP_005829378.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
           R2846]
 gi|309973122|gb|ADO96323.1| 1-deoxyxylulose-5-phosphate synthase [Haemophilus influenzae R2846]
          Length = 625

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/552 (45%), Positives = 350/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+  F  R ESE+D    GHSSTSISAGLG+AV  + +      V VIGDG+
Sbjct: 95  MSTIRQKGGIHPFPWREESEFDVLSVGHSSTSISAGLGIAVAAERENASRKTVCVIGDGS 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 155 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ +K +  ++  P+     K +E+ +G++    STLFEELG  YIGPVDGHN+++L
Sbjct: 206 STLRDGSKKILDKVP-PIKNFMKKTEEHMKGVMFSPESTLFEELGFNYIGPVDGHNIEEL 264

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L  ++N K  GP  +H+ T+KG+GY  AEK    +HGV KFDP +G+  K++++  +
Sbjct: 265 VATLTNMRNLK--GPQFLHIKTKKGKGYAPAEKDPIGFHGVPKFDPISGELPKNNSKP-T 321

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFA GL
Sbjct: 322 YSKIFGDWLCEMAEKDAKIIGITPAMREGSGMVEFSQRFPKQYFDVAIAEQHAVTFATGL 381

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++FM
Sbjct: 382 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQNLPVLFAIDRAGIVGADGATHQGAFDLSFM 441

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM++M PSDE E   M+ T      +P+  RYPRGN +GV+L P      L +GK 
Sbjct: 442 RCIPNMIIMTPSDENECRQMLYTGYQC-GKPAAVRYPRGNAVGVKLTPLEM---LPIGKS 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ EG+++A+L +GT + S L AS  L +     TV D RF KP+D  +I  LA++H+ 
Sbjct: 498 RLIREGQKIAILNFGTLLPSALEASEKLNA-----TVVDMRFVKPIDIEMINMLAQTHDY 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L   G     ++   L LPD +I   +  + L   GL   
Sbjct: 553 LVTLEENAIQGGVGSAVSEVLNSSGKSTALLQ---LGLPDYFIPQATQQEALEDLGLDTK 609

Query: 540 HIAATVFNILGQ 551
            I   + N + +
Sbjct: 610 GIEEKIINFIAK 621


>gi|81299241|ref|YP_399449.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus elongatus
           PCC 7942]
 gi|30315830|sp|Q8GAA0.1|DXS_SYNE7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|24414833|emb|CAD55646.1| 1-deoxy-D-xylulose 5-phosphate synthase [Synechococcus elongatus
           PCC 7942]
 gi|81168122|gb|ABB56462.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Synechococcus elongatus
           PCC 7942]
          Length = 636

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/557 (45%), Positives = 349/557 (62%), Gaps = 24/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR+E+ +D FG GH+STSISA LGMA+ RD +G     VAVIGDG+
Sbjct: 87  FHTLRQKDGIAGYLKRTENRFDHFGAGHASTSISAALGMALARDAQGEDYRCVAVIGDGS 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN     P          VGALS  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTRLLVVLNDNDMSISPN---------VGALSRYLNKIRVSEP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L +      +QI   GG + +    V E  + +       +FEELG  Y+GPVDGHN
Sbjct: 198 MQLLTDGLTQGMQQIPFVGGAITQGFEPVKEGMKRLSYSKIGAVFEELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSS 235
           +++L+A   E    K TGPVL+HV T KG+GYPYAE+    YH    FD ATGK +  S 
Sbjct: 258 LEELIATFREAH--KHTGPVLVHVATTKGKGYPYAEEDQVGYHAQNPFDLATGKAKPASK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  F + L   A+ D+ +V I AAM  GTGL++  +  P +  DVGIAEQHAV 
Sbjct: 316 PKPPSYSKVFGQTLTTLAKSDRRIVGITAAMATGTGLDILQKALPKQYIDVGIAEQHAVV 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+AC+G++P  AIYS+F+QRA+DQV+HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGMACDGMRPVVAIYSTFLQRAFDQVIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP-PGNKGIP 414
           D+ ++  +PNMV+MAP DEAEL  M+ T    D  P   R+PRGNGIGV LP  G + +P
Sbjct: 436 DIAYLRLIPNMVLMAPKDEAELQRMLVTGIEYDG-PIAMRFPRGNGIGVPLPEEGWESLP 494

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GK   L +G+ + +L YG+ V   L  + LL  +G+  TV +ARF KPLD  LI  L
Sbjct: 495 --IGKAEQLRQGDDLLMLAYGSMVYPALQTAELLNEHGISATVINARFAKPLDEELIVPL 552

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T EEG + GGFGS +++ L    L    V   P+ +PD  ++H SP +   +
Sbjct: 553 ARQIGKVVTFEEGCLPGGFGSAIMESLQAHDL---QVPVLPIGVPDLLVEHASPDESKQE 609

Query: 534 AGLTPSHIAATVFNILG 550
            GLTP  +A  +    G
Sbjct: 610 LGLTPRQMADRILEKFG 626


>gi|402304803|ref|ZP_10823867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sputorum HK
           2154]
 gi|400377210|gb|EJP30090.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus sputorum HK
           2154]
          Length = 619

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 349/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ DG+  F  R ES YD    GHSSTSISAGLG+AV    +      V VIGDGA
Sbjct: 92  IKTIRQKDGIHPFPWREESVYDVLSVGHSSTSISAGLGIAVAAQKENAGRQTVCVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+AG L +DM+VILNDN ++S+           VGAL++ L+++ S    
Sbjct: 152 ITAGMAFEALNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLAQIFSGSLY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ +K V  ++  P+     K +E+ +G+IS   STLFEELG  YIGPVDGHN+++L
Sbjct: 203 TTVRDGSKKVLDKVPSPIKNFMKKTEEHMKGVISPV-STLFEELGFNYIGPVDGHNIEEL 261

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ ++  K  GP  +HV T+KG+GY  AE     YHGV KFDPA+G Q   +    +
Sbjct: 262 VKTLKNMRELK--GPQFLHVRTKKGKGYQPAENDPIGYHGVPKFDPASG-QLPKAKSIPT 318

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTFAAGL
Sbjct: 319 YSDIFGQWLCETAEQDTKLIGITPAMREGSGMVEFSKRFPAQYFDVAIAEQHAVTFAAGL 378

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYSSF+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FD++F+
Sbjct: 379 AIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFI 438

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +M PSDE E+  M+ TA  + + P+  RYPRGN  GV L P      LE+GKG
Sbjct: 439 RCIPNMTIMTPSDENEMRQMLYTAYQM-NTPTAVRYPRGNAKGVALEPMQS---LEIGKG 494

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ +GE+VA+L +GT +     A  + E+     T+ D RF KPLD ALI+ LA SH++
Sbjct: 495 KLIRQGEKVAILNFGTFLTE---AQKVAEAG--NYTLVDMRFVKPLDEALIQELANSHDL 549

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG GS V ++L + G      K +PLV+   PD +I   +  +     GL
Sbjct: 550 LVTLEENAIQGGAGSAVNEYLQKIG------KIKPLVMLGIPDEFIPQSTQQEAYEALGL 603

Query: 537 TPSHIAATV 545
             + I   +
Sbjct: 604 DSAGIKQKI 612


>gi|77165220|ref|YP_343745.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani ATCC
           19707]
 gi|254434625|ref|ZP_05048133.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani
           AFC27]
 gi|119368200|sp|Q3JAD1.1|DXS_NITOC RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|76883534|gb|ABA58215.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani ATCC
           19707]
 gi|207090958|gb|EDZ68229.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrosococcus oceani
           AFC27]
          Length = 640

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/546 (47%), Positives = 342/546 (62%), Gaps = 27/546 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL+ F  R ES YD FG GHSSTSISA LGMA+  + KG K   VA+IGDG MT
Sbjct: 96  TIRQAGGLAPFPSRHESPYDTFGVGHSSTSISAALGMAIAANEKGEKRKTVAIIGDGGMT 155

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG AYEA+++AG L +D++VILNDN+    P          VGA+SS L+RL S R    
Sbjct: 156 AGMAYEALDHAGALGADLLVILNDNEMSISPN---------VGAISSYLTRLLSGRVYST 206

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           +RE +K V +++  PM ELA + +E+ +GM++    TLFEE+G  Y GP+DGH++  L+ 
Sbjct: 207 VREGSKKVLERMPPPMWELARRTEEHVKGMVAPG--TLFEEMGFNYFGPIDGHDLSSLIR 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQF--KSSARTQS 240
            L  +   K TGP L+H+VT KG+GY  AE+    YHGV  FDP  G Q   +  +   S
Sbjct: 265 TLRNLH--KLTGPRLLHIVTCKGKGYTLAEENPVTYHGVTPFDPKVGIQQGPQKPSSAMS 322

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F++ L   A  D  +V I  AM  G+GL  F   FP R FDV IAEQH+VT AAG+
Sbjct: 323 YTQVFSQWLCDMAAQDGLLVGITPAMREGSGLVKFSECFPERYFDVAIAEQHSVTLAAGM 382

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           AC+GLKP  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAG+VG DGPTH GSFD+T++
Sbjct: 383 ACDGLKPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGVVGPDGPTHAGSFDLTYL 442

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+VVMAP+DE E   M+ T   + ++P+  RYPRG G GV +      +PL  GK 
Sbjct: 443 RCIPNLVVMAPADENECRQMLYTGFLL-NQPAAVRYPRGKGPGVAVEASMTALPL--GKA 499

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G  +A+L +G  V   L A+  L++     TV + RF KPLD  L+  +A +HE+
Sbjct: 500 ELKRKGRGIAILAFGATVAPALEAAEKLDA-----TVVNMRFVKPLDEDLVLEMAMNHEL 554

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+TVE+  I GG GS V + LA  G+   +V      LPD +++HGS    L Q  L   
Sbjct: 555 LVTVEDNVIAGGAGSAVSECLAYHGV---SVPLLLHGLPDNFLEHGSREALLEQCHLNAE 611

Query: 540 HIAATV 545
            I   V
Sbjct: 612 GILQRV 617


>gi|339326732|ref|YP_004686425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Cupriavidus necator N-1]
 gi|338166889|gb|AEI77944.1| 1-deoxy-D-xylulose-5-phosphate synthase Dxs [Cupriavidus necator
           N-1]
          Length = 638

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 272/571 (47%), Positives = 358/571 (62%), Gaps = 36/571 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF +RSESEYD FGT HSSTSISA LGMA+G    G K   VAVIGDGA
Sbjct: 90  MGTLRQWGGISGFPRRSESEYDTFGTAHSSTSISAALGMALGARTLGEKRVSVAVIGDGA 149

Query: 61  MTAGQAYEAMNNAG-YLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG Y D  ++V+LNDN  +S+         PPVGAL+  L+RL S + 
Sbjct: 150 MTAGMAFEALNNAGVYKDLPLVVVLNDN-DMSIS--------PPVGALNRHLARLLSGQF 200

Query: 120 LRELREVAKGVTK--QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
               +   KG+ K   +  P+ E A + +E+A+GM+  +  TLFEE G  YIGP+DGH++
Sbjct: 201 YAATK---KGIEKVLSVAPPVLEFAKRFEEHAKGMMVPA--TLFEEFGFNYIGPIDGHDL 255

Query: 178 DDLVAILEEVKNT--KTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           + LV  L  ++    +  GP  +HVVT+KG+GY  AE     YHG  KF+PA G +  + 
Sbjct: 256 NSLVPTLLNIRQRALEGAGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPAAK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
              ++YT  F + L   A  DK +V I  AM  G+G+  F +RFP R +DVGIAEQHAVT
Sbjct: 316 PARKTYTQVFGDWLCDMAAADKRLVGITPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FA GLACEGLKP  AIYS+F+QR YDQ++HDV LQ LPV FA+DRAGLVGADG TH G++
Sbjct: 376 FAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGAY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D+ ++ C+PNM+VM PSDE E   ++ TA      PS  RYPRG+G G  +      +P 
Sbjct: 436 DIAYLRCIPNMMVMTPSDENECRQLLTTAFH-QTCPSAVRYPRGSGPGAAIAAELTTVP- 493

Query: 416 EVGKGRILIE-----GERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHAL 470
            VGKG +  E     G RV  L +G+ V   L A+  L++      VAD RF KPLD  L
Sbjct: 494 -VGKGVMRREGGARAGHRVGFLAFGSMVHPALGAAEALDA-----AVADMRFVKPLDVEL 547

Query: 471 IRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPAD 529
           ++ LA  ++ L+TVEEGS+ GG GS V++ LA+ G+    +    L LPDR++DHG PA 
Sbjct: 548 VKRLAAENDYLVTVEEGSVMGGAGSAVLEALAEAGIDKPVLT---LGLPDRFVDHGDPAY 604

Query: 530 QLAQAGLTPSHIAATVFNILGQTREALEIMS 560
            L Q GL  + I  +V    G  +  + + S
Sbjct: 605 LLQQCGLDATGIERSVRERFGLDQPKVTVAS 635


>gi|160874500|ref|YP_001553816.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS195]
 gi|378707749|ref|YP_005272643.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS678]
 gi|418023372|ref|ZP_12662357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS625]
 gi|189027786|sp|A9KTL5.1|DXS_SHEB9 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|160860022|gb|ABX48556.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS195]
 gi|315266738|gb|ADT93591.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS678]
 gi|353537255|gb|EHC06812.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS625]
          Length = 622

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/553 (47%), Positives = 350/553 (63%), Gaps = 27/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGL  F  R ESEYD F  GHS TSISA L MA+  + +     VVAVIGDGA
Sbjct: 95  MHTIRQKDGLHPFPWREESEYDTFSVGHSGTSISAALAMAIAAEKEQAGRKVVAVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G  +EAMN+AG L +DM+V+LNDN ++S+           VGAL++ L++L S R  
Sbjct: 155 MTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISEN--------VGALNNHLAQLMSGRFY 205

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             LRE  K V K  G P + E+A + +E+ +GM+     TLFEELG  YIGP+DGH+VD 
Sbjct: 206 TTLREGGKKVLK--GMPVIKEMAKRTEEHLKGMVVPG--TLFEELGFNYIGPIDGHDVDA 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  +  ++N K  GP ++H++T+KGRGY  AEK    +H V KFDP+  K+  +     
Sbjct: 262 LVETMRNMRNLK--GPQVLHIMTKKGRGYEPAEKDPIGWHAVPKFDPSLFKKPATKPGLP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +++  F + L   AE D+ V+AI  AM  G+G+  F +RFP + FD  IAEQHAVT AAG
Sbjct: 320 TFSQVFGKWLCDIAEQDEKVLAITPAMREGSGMVEFSQRFPKQYFDAAIAEQHAVTLAAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
            ACEG KP  AIYS+F+QRAYDQ++HDV LQ+LPV FA+DR G+VGADGPTH G+FD++F
Sbjct: 380 FACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSF 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNMV+MAPSDE E   M+ T    D  PS  RYPRG+  G         +P  +GK
Sbjct: 440 MRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGAMQVEAMTALP--IGK 497

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I   G+R+A+L +GT     L ASAL  +  L  TV D RF KPLD  L++ +A++HE
Sbjct: 498 GVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHE 552

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           VL+TVEE +I GG G+ V++ L +  +    ++   + LPD +I HGSP +      L  
Sbjct: 553 VLVTVEENAIMGGAGAGVLEQLQKLRMPKAVLQ---IGLPDEFIKHGSPEEVTHDLQLDA 609

Query: 539 SHIAATVFNILGQ 551
             I A +   L Q
Sbjct: 610 EGILAQINAYLAQ 622


>gi|374324622|ref|YP_005077751.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus terrae
           HPL-003]
 gi|357203631|gb|AET61528.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus terrae
           HPL-003]
          Length = 632

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/540 (45%), Positives = 345/540 (63%), Gaps = 24/540 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ DGL GF KRSESE+D +  GHSSTS+SA +GMA+ RDLKG  N V+A+IGDGA+T
Sbjct: 89  TLRQRDGLCGFVKRSESEHDVWEAGHSSTSLSAAMGMALARDLKGEDNKVIALIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+EA+N+ G+   +++VILNDN+    P          VGA+ + LS+++S+R    
Sbjct: 149 GGMAFEALNHIGHERKNLMVILNDNEMSIAPN---------VGAMHNYLSKIRSDRYYLR 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++  + + K+I   GG + + A +V D     M+ G    LFEELGL Y+GPVDGH++ 
Sbjct: 200 AKDELEVLLKKIPAIGGKLAKSAGRVKDSLKYMMVPG---VLFEELGLTYLGPVDGHDLP 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+   ++  N   TGPVL+HVVT KG+GY  AE  + K+HG++ +   +G+  K+    
Sbjct: 257 KLIETFKQADNV--TGPVLVHVVTTKGKGYKPAEADSHKWHGISPYKMESGQVLKAVGNP 314

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
             YT  F   LI  AE D+ ++A+  AM GG+GL  F + FPTR  DVGIAEQHA T  A
Sbjct: 315 M-YTEIFGRTLIELAEKDERIIAVTPAMPGGSGLVPFSKEFPTRMIDVGIAEQHAATMCA 373

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
            LA EG+KP  A+YS+FMQRAYDQ+VHD+      V FA+DRAG VGADG TH G FDV 
Sbjct: 374 ALAMEGMKPVFAVYSTFMQRAYDQIVHDICRHNANVMFAIDRAGFVGADGETHHGVFDVA 433

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  +PN+V+M P DE EL HM+ TA   DD P  +RYPR NG+GV L    K IP  +G
Sbjct: 434 FLRHIPNLVLMMPKDENELRHMMKTALDYDDGPIAYRYPRVNGVGVPLDTELKAIP--IG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              +L +GE  A++  G  +Q    A+  ++  GL++ V +ARF KP+D  ++R LA+ H
Sbjct: 492 SWELLRKGEGYAVIASGPMLQVATEAAEAMKREGLQVGVVNARFLKPVDEDMLRELARQH 551

Query: 479 EVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             LI +EE S  G  GS V++F A++ + +  V  R + +PD +++HGS  +Q ++AGLT
Sbjct: 552 TKLIVLEEASEAGSLGSAVLEFYAKEEMQNAQV--RLMGIPDMFVEHGSIKEQRSEAGLT 609


>gi|113476604|ref|YP_722665.1| 1-deoxy-D-xylulose-5-phosphate synthase [Trichodesmium erythraeum
           IMS101]
 gi|123352111|sp|Q10ZY2.1|DXS_TRIEI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|110167652|gb|ABG52192.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Trichodesmium erythraeum
           IMS101]
          Length = 635

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/554 (45%), Positives = 354/554 (63%), Gaps = 25/554 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KR ES++D FG GH+STSISAGLGMA+ RD+KG    VV++IGDGA+
Sbjct: 88  HTLRQKDGIAGYLKRCESKFDHFGAGHASTSISAGLGMALARDMKGDNFKVVSIIGDGAL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L  ++++V+LNDN ++S+         P VGA+S  L++++ + P+
Sbjct: 148 TGGMALEAINHAGHLPKTNILVVLNDN-EMSIS--------PNVGAISRYLNKMRLSPPI 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHN 176
           + L++  +   KQI         +++    GM    +S  G+ + EELG  Y+GPVDGHN
Sbjct: 199 QFLQDNLEEQFKQIPFVGETFTPEMEGLKGGMKRLAVSKVGAVI-EELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L+    +    +  GPVL+HV T KG+GYP AE+    YH    F+ ATGK   +S 
Sbjct: 258 LEELITTFNQAH--QIPGPVLVHVATTKGKGYPVAEEDKVSYHAQNPFNLATGKALPASK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +   Y+  FA  L+  AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPKYSKVFAHTLVKLAENNPKIIGITAAMATGTGLDKLHGKLPKQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLA EG++P   IYS+F+QRAYDQ++HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLASEGMRPVVCIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGIP 414
           D+ ++ C+PNMVVMAP DE EL  MV T     D     RYPRGNG GV L   G + I 
Sbjct: 436 DIAYLRCIPNMVVMAPKDEGELQRMVLTGIKHTDGAIAMRYPRGNGYGVPLMEEGWEAI- 494

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GKG IL  G+ V +LGYG+ V S +  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 495 -TIGKGEILRNGDDVLILGYGSMVYSAMQTAEILSEHGVAATVVNARFVKPLDTELILPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFGS V + L  + +L   ++   L +PD+ +DH  P +  A 
Sbjct: 554 AQRIGQVVTMEEGCLMGGFGSAVTEALMDNNVLVPVLR---LGVPDKLVDHAKPDESKAD 610

Query: 534 AGLTPSHIAATVFN 547
            GLTPS +A  +  
Sbjct: 611 LGLTPSQMAERILQ 624


>gi|386010187|ref|YP_005928464.1| hypothetical protein PPUBIRD1_0567 [Pseudomonas putida BIRD-1]
 gi|313496893|gb|ADR58259.1| Dxs [Pseudomonas putida BIRD-1]
          Length = 631

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/549 (46%), Positives = 350/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVDFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE+VALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA +HE+
Sbjct: 505 VVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGNHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   +L      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DAAGIEASV 622


>gi|225025166|ref|ZP_03714358.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC
           23834]
 gi|224942127|gb|EEG23336.1| hypothetical protein EIKCOROL_02059 [Eikenella corrodens ATCC
           23834]
          Length = 626

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 267/552 (48%), Positives = 349/552 (63%), Gaps = 31/552 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ  GL+GF KRSESEYD FG GHSSTSI A LGMAV   L G  N  VAVIGDGA
Sbjct: 91  MHTMRQYGGLAGFPKRSESEYDDFGVGHSSTSIGAALGMAVADKLSGSLNRSVAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNR-- 118
           MTAGQA+EA+NNAG +D+D++VILNDN ++S+         P VGA    L+  Q     
Sbjct: 151 MTAGQAFEALNNAGDMDTDLLVILNDN-EMSIS--------PNVGAFPKYLAGSQGKDWR 201

Query: 119 -PLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSG---STLFEELGLYYIGPVDG 174
             LR ++  ++ V  ++ G +H +A KV++  + ++ GS     +LF+  G  Y GPVDG
Sbjct: 202 DTLRSIKHKSEKVLDKLPGALH-IAQKVEQRLKSVLDGSRIRPDSLFDNFGFTYTGPVDG 260

Query: 175 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 234
           H+V  LVA+L+E+K  K  GP L+HV+T+KG+GY  AE     +H V KF+P  G     
Sbjct: 261 HDVRQLVAVLKEMKQRK--GPQLLHVLTQKGQGYKLAENDPVGFHAVGKFNPDQGP-VSG 317

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
            A   SYT  F + +  +A  D  +VAI  AM  G+GL  F RRFP R FDVGIAEQHAV
Sbjct: 318 GAAPLSYTQIFGQWVCDQAATDGKLVAITPAMREGSGLVEFERRFPERYFDVGIAEQHAV 377

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFAAGLAC  +KP  AIYS+F+QRAYDQ+VHDV LQ LPV FA+DRAG+VGADGPTH G+
Sbjct: 378 TFAAGLACGNIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAIDRAGIVGADGPTHAGA 437

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D++F+ C+PNMV+ APS   E   +++T  A+ D P+  RYPRG      +  G   +P
Sbjct: 438 YDLSFLRCIPNMVLAAPSSGEECRLLLSTCYAL-DCPTAVRYPRGASGSAVISSGLDTVP 496

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             VGKG +  +G   A+L +G+ VQ  L A+  L+     LTVAD RF KPLD  LI  L
Sbjct: 497 --VGKGVVRRQGRETAVLAFGSMVQPALRAAEQLD-----LTVADMRFVKPLDEELIADL 549

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A +H+ L+ +EE ++ GG GS V++ LA+    D  +    L + D    HG PA  L  
Sbjct: 550 AATHQRLVCIEENAVQGGAGSAVLEVLAKQ---DCHLPVLLLGIEDIVTGHGDPAILLDD 606

Query: 534 AGLTPSHIAATV 545
            GL+   +AA +
Sbjct: 607 LGLSAEKLAARI 618


>gi|409201479|ref|ZP_11229682.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudoalteromonas
           flavipulchra JG1]
          Length = 620

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/546 (46%), Positives = 345/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGL  F  R ESEYD F  GHSSTSISA LGMA+  + +G     VAVIGDGA
Sbjct: 95  MHTIRQKDGLHPFPYREESEYDTFSVGHSSTSISAALGMAIAAEKEGIGRKTVAVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EAMN+AG ++ DM+VILNDN ++S+           VGAL++  +++ S    
Sbjct: 155 MTAGMAFEAMNHAGDINPDMLVILNDN-EMSISEN--------VGALTNHFAKILSGSFY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +   +  P+ ELA +++E+ +GMI     T FEELG  YIGP+DGHNVD L
Sbjct: 206 TNIREGSKKLLSGVP-PVKELAGRMEEHLKGMIIPG--TFFEELGFNYIGPIDGHNVDTL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  ++N K  GP L+HV T+KG+GY  AE     YH V KFDP+     KS     +
Sbjct: 263 VDTLRNMRNLK--GPQLLHVKTQKGKGYKPAEADPIGYHAVPKFDPSVHSLPKSKPSAPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           ++  F + L   A  D  ++AI  AM  G+G+  F + +P + FDV IAEQHAVT AAG 
Sbjct: 321 FSKVFGDWLCDMAAQDNKLMAITPAMREGSGMVRFSKEYPAQYFDVAIAEQHAVTLAAGF 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACE L P  AIYSSF+QRAYDQ++HDV LQ LPV FA+DRAG+VGADG TH G++D++F+
Sbjct: 381 ACEDLNPVVAIYSSFLQRAYDQLIHDVALQNLPVLFAIDRAGVVGADGETHQGAYDLSFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MAPSD  E   M+ T   + DRP+  RYPRG+    E+    +   +EVGKG
Sbjct: 441 RCIPNMVIMAPSDLNECRQMLYTGHRL-DRPAAVRYPRGSAGSAEI--DTEMTAIEVGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ EGE++A+L +GT ++S  A +  L +     T+ D RF KPLD ALI  L  +HE 
Sbjct: 498 KVVREGEKLAILSFGTLLESAQAVAEELNA-----TLVDMRFVKPLDCALIEELVVTHER 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
            +T+E+ +I GG GS V ++L   G        + L LPD +I HGS  +  A+ GL   
Sbjct: 553 FVTLEDNAIAGGAGSAVSEYLIAQG---HQKPIKLLGLPDEFIKHGSQTEIHAELGLNSE 609

Query: 540 HIAATV 545
            I+  +
Sbjct: 610 GISQQI 615


>gi|269965071|ref|ZP_06179236.1| 1-deoxyxylulose-5-phosphate synthase [Vibrio alginolyticus 40B]
 gi|269830374|gb|EEZ84599.1| 1-deoxyxylulose-5-phosphate synthase [Vibrio alginolyticus 40B]
          Length = 621

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/552 (46%), Positives = 351/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL  F  R ESEYD    GHSSTSISAGLGMA+    +G+   +V+VIGDGA
Sbjct: 95  MPTIRQKDGLHPFPWREESEYDTLSVGHSSTSISAGLGMAISAQKEGKGRKIVSVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L+++ S    
Sbjct: 155 ITAGMAFEAMNHAGDVHPDMLVILNDN-EMSISEN--------VGALNNHLAKVLSGSLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K V   +  P+ EL  + +E+ +GM+     TLFEE G  YIGP+DGH+V++L
Sbjct: 206 TSIREGGKKVLSGVP-PIKELVRRTEEHLKGMVVPG--TLFEEFGFNYIGPIDGHDVNEL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ ++  K  GP  +H++T+KG+GY  AEK    YHGV KFDP      KSS    +
Sbjct: 263 VKTLKNMRELK--GPQFLHIMTKKGKGYEPAEKDPIGYHGVPKFDPTHNCLPKSSGGKPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  ++AI  AM  G+G+  F + +P + FDV IAEQHAVT A G+
Sbjct: 321 YSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPDQYFDVAIAEQHAVTLATGM 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G  P  AIYS+F+QR YDQ++HD+ +  LPV FA+DRAGLVGADG TH G+FD++FM
Sbjct: 381 AIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFM 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MAPSDE E   M+ T       PS  RYPRG+G+GVE+    +   LE+GKG
Sbjct: 441 RCIPNMVIMAPSDENECRQMLYTGHK-HSGPSAVRYPRGSGMGVEIE--TEFTALEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +GE+VA+L +GT + + L A+  L +     TVAD RF KPLD ALIR LA  H+V
Sbjct: 498 RMVRQGEKVAILNFGTFLGNALEAAEYLNA-----TVADMRFVKPLDEALIRQLAADHDV 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE  I GG G+ VV+F+ +D ++   +    L LPD +I  G+  +   + GL   
Sbjct: 553 LVTLEENVIAGGAGAGVVEFMMKDKIIKPVLN---LGLPDEFIHQGTQDELHEELGLDAK 609

Query: 540 HIAATVFNILGQ 551
            I  ++ + L +
Sbjct: 610 GIEKSILDYLAK 621


>gi|398999015|ref|ZP_10701768.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM18]
 gi|398132634|gb|EJM21896.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM18]
          Length = 632

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/547 (46%), Positives = 345/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MSTLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFPTR FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPTRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PIAKDLEPIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GVVRRQGSTVALLVFGVQLAEALKVAEKLDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I   V
Sbjct: 617 AGIEEAV 623


>gi|167031588|ref|YP_001666819.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida GB-1]
 gi|189027782|sp|B0KL79.1|DXS_PSEPG RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|166858076|gb|ABY96483.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida GB-1]
          Length = 631

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/549 (46%), Positives = 349/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA             
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPADKPAAPKKVSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVDFSERYPQRYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLQPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE++ALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA SHE+
Sbjct: 505 VVRRQGEKIALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   +L      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAIMGGAGAAVGEFLASQAVL------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DAAGIEASV 622


>gi|91225062|ref|ZP_01260284.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio alginolyticus
           12G01]
 gi|91190005|gb|EAS76276.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio alginolyticus
           12G01]
          Length = 621

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/552 (46%), Positives = 351/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL  F  R ESEYD    GHSSTSISAGLGMA+    +G+   +V+VIGDGA
Sbjct: 95  MPTIRQKDGLHPFPWREESEYDTLSVGHSSTSISAGLGMAISAQKEGKGRKIVSVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L+++ S    
Sbjct: 155 ITAGMAFEAMNHAGDVHPDMLVILNDN-EMSISEN--------VGALNNHLAKVLSGSLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K V   +  P+ EL  + +E+ +GM+     TLFEE G  YIGP+DGH+V++L
Sbjct: 206 TSIREGGKKVLSGVP-PIKELVRRTEEHLKGMVVPG--TLFEEFGFNYIGPIDGHDVNEL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ ++  K  GP  +H++T+KG+GY  AEK    YHGV KFDP      KSS    +
Sbjct: 263 VKTLKNMRELK--GPQFLHIMTKKGKGYEPAEKDPIGYHGVPKFDPTHNCLPKSSGGKPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  ++AI  AM  G+G+  F + +P + FDV IAEQHAVT A G+
Sbjct: 321 YSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPDQYFDVAIAEQHAVTLATGM 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G  P  AIYS+F+QR YDQ++HD+ +  LPV FA+DRAGLVGADG TH G+FD++FM
Sbjct: 381 AIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFM 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MAPSDE E   M+ T       PS  RYPRG+G+GVE+    +   LE+GKG
Sbjct: 441 RCIPNMVIMAPSDENECRQMLYTGHK-HSGPSAVRYPRGSGMGVEIE--TEFTALEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +GE+VA+L +GT + + L A+  L +     TVAD RF KPLD ALIR LA  H+V
Sbjct: 498 RMVRQGEKVAILSFGTFLGNALEAAEYLNA-----TVADMRFVKPLDEALIRQLAADHDV 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE  I GG G+ VV+F+ +D ++   +    L LPD +I  G+  +   + GL   
Sbjct: 553 LVTLEENVIAGGAGAGVVEFMMKDKIIKPVLN---LGLPDEFIHQGTQDELHEELGLDAK 609

Query: 540 HIAATVFNILGQ 551
            I  ++ + L +
Sbjct: 610 GIEKSILDYLAK 621


>gi|452124387|ref|ZP_21936971.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella holmesii F627]
 gi|451923617|gb|EMD73758.1| 1-deoxy-D-xylulose-5-phosphate synthase [Bordetella holmesii F627]
          Length = 623

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/526 (49%), Positives = 344/526 (65%), Gaps = 27/526 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G     +AVIGDGA
Sbjct: 91  MAQLRQQGGISGFPKRSESEYDAFGTAHSSTSISAALGMAVASRNAGVARQHIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EAMNNAG   + +++VILNDN  +S+         PPVGAL+  L+RL S R 
Sbjct: 151 MSAGMAFEAMNNAGVTPNINLLVILNDN-DMSIS--------PPVGALNRYLARLMSGRF 201

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ ELA +++E+A+GMI+ +  TLFEE G  Y+GP+DGH+++ 
Sbjct: 202 YATAKNVGRAVLQHVP-PVLELARRLEEHAKGMITPA--TLFEEFGFNYVGPIDGHDLEA 258

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +K  +  G   +HVVT KG+GY  AE     YHG  KFDPA G Q   +   Q
Sbjct: 259 LIPTLQNLKTLQ--GLQFLHVVTRKGQGYKLAEADPVLYHGPGKFDPAVGIQKAKTPSKQ 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F++ L  +A+ D  +V I  AM  G+GL  F +RFP R FDVGIAEQHAVTFAAG
Sbjct: 317 TFTQVFSQWLCDQAQADVRLVGITPAMREGSGLVEFEKRFPMRYFDVGIAEQHAVTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QR YDQ++HDV LQ L V FA+DRAGLVGADG TH G++D+ F
Sbjct: 377 LACEGQKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGLVGADGATHAGNYDIAF 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMV+  PSDE E   +++T  A    P+  RYPRG G G E+  G + + L  G+
Sbjct: 437 LRCVPNMVIATPSDENETRLLLSTCYAYPG-PASVRYPRGAGCGAEVTSGLEIVALGKGR 495

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
             +   G ++A+LG+GT VQ+ LAA     + GL  TVAD RF KPLD  L+R LA SH+
Sbjct: 496 --VRRRGRKIAILGFGTLVQAALAA-----AEGLDATVADMRFVKPLDRELLRELAASHD 548

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDH 524
            L+T+E+ +I GG GS V + L   GL+   +    L LPD +IDH
Sbjct: 549 ALVTLEDAAIMGGAGSAVTEALNDMGLVLPVLH---LGLPDEFIDH 591


>gi|440737921|ref|ZP_20917472.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BRIP34879]
 gi|440381660|gb|ELQ18186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           BRIP34879]
          Length = 632

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/547 (45%), Positives = 349/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M+++RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+G +   +AVIGDGA
Sbjct: 102 MNSLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K DP           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLDPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V +  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGVTPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G  VA L +G  +   L  +  +++     TV D RF KPLD AL+R +A SHE
Sbjct: 505 GIVRRQGSNVAFLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAGSHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I  G G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMAGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I  +V
Sbjct: 617 AGIETSV 623


>gi|300722009|ref|YP_003711289.1| 1-deoxy-D-xylulose-5-phosphate synthase [Xenorhabdus nematophila
           ATCC 19061]
 gi|297628506|emb|CBJ89073.1| 1-deoxy-D-xylulose 5-phosphate synthase; flavoprotein,
           thiamin-binding [Xenorhabdus nematophila ATCC 19061]
          Length = 621

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/550 (47%), Positives = 343/550 (62%), Gaps = 26/550 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ +GL  F  R ESEYD    GHSSTSISAGLGMA+  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKNGLHPFPWREESEYDTLCVGHSSTSISAGLGMAIAAEREGKGRKTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +D DM+VILNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIDPDMLVILNDN-EMSISEN--------VGALNNHLAQLLSGKLYTT 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  K +E+ +GM+     TLFEELG  YIGPVDGH+V  L  
Sbjct: 208 LREGGKKVFSNLP-PIKELLKKTEEHLKGMVVPG--TLFEELGFNYIGPVDGHDVLALTQ 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ ++  K  GP  +H++T+KGRGY  AEK    +H V KFDP TG   KS+    +++
Sbjct: 265 TLKNMRELK--GPQFLHIMTKKGRGYAPAEKDPISWHAVPKFDPTTGSLPKSADTRPTFS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L  EA  DK ++AI  AM  G+G+  F R +P + FDV IAEQH+ TFAAGLA 
Sbjct: 323 KIFGDWLCEEAAQDKKLMAITPAMREGSGMVRFSREYPEQYFDVAIAEQHSATFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HD+ +Q LPV FA+DR G+VGADG TH GSFD++F+ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVIHDIAIQNLPVLFAIDRGGIVGADGQTHQGSFDLSFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +PNMV+MAPSDE E   M+ T       P+  RYPRG G G EL P      L +GKG +
Sbjct: 443 IPNMVIMAPSDENECRQMLHTGHHYQKGPTTVRYPRGAGTGAELQPLET---LPIGKGVL 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
             +GE++A+L +GT +   L A+  L +     TV D RF KPLD  L   +A SH++L+
Sbjct: 500 RRQGEKIAILNFGTLLPYALQAAETLNA-----TVVDMRFVKPLDKELTLEMAASHDLLV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           T+EE +I GG GS V +FL Q+  L   V    L LPD +I  G+  +  A  GL  + I
Sbjct: 555 TLEENAIMGGAGSGVNEFLMQEKRL---VPVLNLGLPDYFIPQGTQQELHADLGLDAAGI 611

Query: 542 AATVFNILGQ 551
              +   L Q
Sbjct: 612 KNRIEKYLAQ 621


>gi|398891057|ref|ZP_10644497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM55]
 gi|398187292|gb|EJM74636.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM55]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/562 (45%), Positives = 354/562 (62%), Gaps = 34/562 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISHN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T   + + P+  RYPRGNG    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKML-TTGHLYEGPAAVRYPRGNGPNATIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +   L  +  L++     TV D RF KPLD  L+R +A SH+
Sbjct: 505 GVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEELVREIAASHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGGAVGEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMS 560
           + I A++       RE L++++
Sbjct: 617 AGIEASI-------RERLQLLN 631


>gi|118579621|ref|YP_900871.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM
           2379]
 gi|118502331|gb|ABK98813.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM
           2379]
          Length = 624

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 270/555 (48%), Positives = 353/555 (63%), Gaps = 23/555 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT RQ  GLSGF KRSESE+D FG GHSSTSISA LGMA   DL G KN+ +AVIGDG+
Sbjct: 89  FHTQRQYKGLSGFPKRSESEHDAFGVGHSSTSISAALGMAAAADLAGAKNHAIAVIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +T G A+EA+N AG+L  D+IVILNDN ++S+           VGA SS +SR  + R  
Sbjct: 149 LTGGMAFEALNQAGHLKKDLIVILNDN-EMSISKN--------VGAFSSFISRKMTGRYF 199

Query: 121 RELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
           R+L++  +G+ + I   G  +   A + +   +  ++    +LFE LG  Y+GP+DGH++
Sbjct: 200 RDLKKEMQGLLRNIPAIGSDILHFARRAENSLKSFLTPG--SLFEALGFDYLGPLDGHDL 257

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
             L+ +   +   +  GP+L+HV+T KG+GY  AE+  DK+HGV  FD  TGK   SS  
Sbjct: 258 PQLIEVFNNI--NQLDGPLLVHVMTTKGKGYKPAEENPDKFHGVGPFDIVTGKA-TSSTS 314

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
            +SYT  F EA++  AE D  VVAI AAM  GTGL  F  RFP R FDVGIAEQHA+TFA
Sbjct: 315 ARSYTELFGEAMVDLAEQDPRVVAITAAMRDGTGLKTFSERFPKRFFDVGIAEQHAMTFA 374

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA +G +P  AIYS+F+QRAYDQV HD+ LQKLPV  AMDRAGLVG DGPTH G  D 
Sbjct: 375 AGLAADGFRPVTAIYSTFVQRAYDQVFHDICLQKLPVTIAMDRAGLVGDDGPTHHGVMDY 434

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
           +F+  +P + +MAP DE EL HM+ TA      P   RYPRG G+GVEL    K   L++
Sbjct: 435 SFLRHIPGLALMAPKDENELRHMLKTAVT-SGVPISLRYPRGAGMGVELDRDLK--TLDI 491

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           G+G +L+EG  + L+  G+ V   L A+  L+  G+R+ V +ARF KPLD  LI S+A S
Sbjct: 492 GRGELLMEGSDICLIAIGSTVYPALQAAHSLQGLGVRVGVVNARFIKPLDAELILSVAGS 551

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
              ++TVEE  + GGFGS V++ L  + + D  V  R L +PDR+++HGS A      G+
Sbjct: 552 CGRIMTVEENLLQGGFGSAVLELLNDNNMQDVIV--RRLGIPDRFVEHGSQARLRQDLGI 609

Query: 537 TPSHIAATVFNILGQ 551
               IAA     L Q
Sbjct: 610 DAEGIAAAALAFLKQ 624


>gi|126173595|ref|YP_001049744.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS155]
 gi|386340352|ref|YP_006036718.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS117]
 gi|166201535|sp|A3D2B2.1|DXS_SHEB5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|125996800|gb|ABN60875.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS155]
 gi|334862753|gb|AEH13224.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS117]
          Length = 622

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 264/553 (47%), Positives = 349/553 (63%), Gaps = 27/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGL  F  R ESEYD F  GHS TSISA L MA+  + +     VVAVIGDGA
Sbjct: 95  MHTIRQKDGLHPFPWREESEYDTFSVGHSGTSISAALAMAIAAEKEQAGRKVVAVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G  +EAMN+AG L +DM+V+LNDN ++S+           VGAL++ L++L S R  
Sbjct: 155 MTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISEN--------VGALNNHLAQLMSGRFY 205

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             LRE  K V K  G P + E+A + +E+ +GM+     TLFEELG  YIGP+DGH+VD 
Sbjct: 206 TTLREGGKKVLK--GMPVIKEMAKRTEEHLKGMVVPG--TLFEELGFNYIGPIDGHDVDA 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  +  ++N K  GP ++H++T+KGRGY  AEK    +H V KFDP+  K+  +     
Sbjct: 262 LVETMRNMRNLK--GPQVLHIMTKKGRGYEPAEKDPIGWHAVPKFDPSLFKKPTTKPGLP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +++  F + L   AE D+ V+AI  AM  G+G+  F +RFP + FD  IAEQHAVT +AG
Sbjct: 320 TFSQVFGKWLCDIAEQDEKVLAITPAMREGSGMVEFSQRFPKQYFDAAIAEQHAVTLSAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
            ACEG KP  AIYS+F+QRAYDQ++HDV LQKLPV FA+DR G+VGADGPTH G+FD++F
Sbjct: 380 FACEGFKPVVAIYSTFLQRAYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSF 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNMV+MAPSDE E   M+ T    D  PS  RYPRG   G         +P  +GK
Sbjct: 440 MRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGATQVEAMTALP--IGK 497

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I   G+R+A+L +GT     L ASAL  +  L  TV D RF KPLD  L++ +A++HE
Sbjct: 498 GVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHE 552

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           VL+TVEE +I GG G+ V++ L +  +    ++   + LPD +I HGSP +      L  
Sbjct: 553 VLVTVEENAIMGGAGAGVLEQLQKLRMPKAVLQ---IGLPDEFIKHGSPEEVTHDLQLDA 609

Query: 539 SHIAATVFNILGQ 551
             I A +   L Q
Sbjct: 610 EGILAQINAYLAQ 622


>gi|399006275|ref|ZP_10708802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM17]
 gi|398122441|gb|EJM12033.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM17]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/547 (47%), Positives = 349/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K DP  +       A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLDPLDSPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNATIEKDLQ--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +     A AL  ++ L  TV D RF KPLD AL+  +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQL-----AEALKVADKLDATVVDMRFVKPLDEALVCEIAASHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVGEFLAREAILKPILH---LGLPDLYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I A V
Sbjct: 617 AGIEAAV 623


>gi|237797520|ref|ZP_04585981.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020370|gb|EGI00427.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 631

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/547 (45%), Positives = 347/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+G +   +AVIGDGA
Sbjct: 102 MSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVAANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 TSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P       +      
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLNAPVSIQKKVSAP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + +   AE D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGQWICDMAEADSRLVGITPAMKEGSDLVEFSERFPERYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P +VVM PSDE EL  +++T   +   P+  RYPRG G   E+    K  P+E+GK
Sbjct: 448 LRCIPGIVVMTPSDENELRKLLST-GYLHTGPAAVRYPRGTGPNAEIEASLK--PVEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G+ VA+L +G  +   +  +  L++     TV D RF KPLD AL+R  A SHE
Sbjct: 505 GVVRRQGQGVAILVFGVQLSDAMVVAEKLDA-----TVIDMRFVKPLDEALVRETAASHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE ++ GG G+ V +FLA+  +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTLEENAVMGGAGAAVSEFLARVNILKSVLH---LGLPDVYVEHAKPAQMLAECGLNA 616

Query: 539 SHIAATV 545
             I A +
Sbjct: 617 EGIEAAI 623


>gi|424925134|ref|ZP_18348495.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           R124]
 gi|404306294|gb|EJZ60256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           R124]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/548 (45%), Positives = 350/548 (63%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +R+ESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 METLRQKDGIAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSAVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVG 418
           + C+P MV+M PSDE EL  M+ T   + + P+  RYPRG G    +   +K + P+E+G
Sbjct: 448 LRCIPGMVIMTPSDENELRKML-TTGHLYNGPAAVRYPRGTGPNATI---DKDLEPIEIG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A +H
Sbjct: 504 KGIVRRQGSKVALLVFGVQLSEALKVAEKLDA-----TVVDMRFVKPLDEALVREIAGNH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+T+EE ++ GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL 
Sbjct: 559 ELLVTIEENAVMGGAGGAVSEFLARENILKSMLH---LGLPDIYVEHAKPAQMLAECGLD 615

Query: 538 PSHIAATV 545
            + I A++
Sbjct: 616 EAGIEASI 623


>gi|398837496|ref|ZP_10594789.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM102]
 gi|398118788|gb|EJM08514.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas sp. GM102]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/548 (47%), Positives = 349/548 (63%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQHSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPVDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A VD  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAVDPRLVGITPAMKEGSDLVAFSERFPKRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QRAYDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRAYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVG 418
           + C+P M++M PSDE EL  M++T   + + P+  RYPRG G      P  K + P+E+G
Sbjct: 448 LRCIPGMLLMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA---PITKDLEPIEIG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  +G +VALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SH
Sbjct: 504 KGVVRRQGGKVALLVFGVQLAEALKVAEKLDA-----TVIDMRFVKPLDEALVREIAGSH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+TVEE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL 
Sbjct: 559 ELLVTVEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDIYVEHAKPAQMLAECGLD 615

Query: 538 PSHIAATV 545
            + I   V
Sbjct: 616 EAGIEEAV 623


>gi|402833940|ref|ZP_10882547.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. CM52]
 gi|402279009|gb|EJU28052.1| 1-deoxy-D-xylulose-5-phosphate synthase [Selenomonas sp. CM52]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/556 (46%), Positives = 341/556 (61%), Gaps = 25/556 (4%)

Query: 4   MRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMTA 63
           +RQ  G++GF KR ES YD FGTGHSSTSISA LGMA  RD+ G    + AVIGDGA+T 
Sbjct: 92  LRQKGGITGFPKREESVYDAFGTGHSSTSISAALGMAAARDIAGEHYRIAAVIGDGALTG 151

Query: 64  GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQ----SNRP 119
           G+A+E +NNAG L  D+IVILNDN     P          VGA+S  LSR +     +R 
Sbjct: 152 GEAFEGLNNAGTLGKDIIVILNDNGMSIAPN---------VGAMSEYLSRFRVAPGYHRA 202

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            ++++   K +   IG  ++  A  + +  R  +   G  LF ++G +YIGP+DGHN+  
Sbjct: 203 KQDIKNFLKSIP-HIGERVYRTAEHIKDGVRSALVPGG--LFTDMGFHYIGPLDGHNIAL 259

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+ + E+ K  K  GP+LIHV T KG+GY  AEKA DK+HG+ +FD A G   K +    
Sbjct: 260 LLDVFEQAKQLK--GPLLIHVETCKGKGYAPAEKAPDKFHGIGRFDVADGTTLKKAGAKP 317

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT+ F +AL+  AE D DVVAI AAM  GTGL  F  ++PTR FDVGIAEQHA TFAAG
Sbjct: 318 TYTSVFGKALLEAAEEDADVVAITAAMPDGTGLRAFGEKYPTRFFDVGIAEQHATTFAAG 377

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA  G KP  A+YS+F QRAYDQ++HDV LQ L V FA+DRAG VG DG TH G FD ++
Sbjct: 378 LAAAGRKPVLALYSTFAQRAYDQILHDVCLQNLHVVFALDRAGFVGEDGATHHGVFDYSY 437

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LPNM V+AP DE EL  M+ TA +++  P   RYPRG G+G  L       PLE   
Sbjct: 438 LRHLPNMKVLAPKDENELGRMLKTALSLEG-PVALRYPRGEGLGTALE--EPFTPLESLA 494

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
             +L E   +ALL  G+ V +    + LL+  GL   V + R  KPLD  L+  +A   +
Sbjct: 495 AEVLEEEGEIALLAVGSMVDAAQKTAKLLKEEGLSAAVVNMRTVKPLDEELLHRMAHEKK 554

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE ++ GGFGS V++ LA  GLL   V++    + D +I+ G P + L  AGL P
Sbjct: 555 MLVTMEENALAGGFGSAVLEALADAGLLVPVVRFG---IGDAFIEQGKPQELLEMAGLQP 611

Query: 539 SHIAATVFNILGQTRE 554
             +A ++  +    R+
Sbjct: 612 EQMARSILTVWKGARD 627


>gi|170077789|ref|YP_001734427.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. PCC
           7002]
 gi|229836085|sp|B1XKC5.1|DXS_SYNP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169885458|gb|ACA99171.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus sp. PCC
           7002]
          Length = 638

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/552 (46%), Positives = 350/552 (63%), Gaps = 23/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KRSE+ +D FG GH+STSISA LGMA+ RD KG +   VAVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRSENVFDHFGAGHASTSISAALGMALARDAKGEEFKCVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L D++++V+LNDN ++S+         P VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPDTNLMVVLNDN-EMSIS--------PNVGAISRYLNKVRLSDP 197

Query: 120 LRELREVAKGVTKQI---GGPMH-ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGH 175
           ++ L +  +   K +   G  +  E+    D   R  +S  G+ + EELG  Y GPVDGH
Sbjct: 198 VQFLTDNLEEQVKHLPFLGDSLTPEMERLKDSMKRLAVSKVGAVI-EELGFKYFGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+   ++    K  GP L+HV T KG+GY  AEK    YH    FD ATGK F S 
Sbjct: 257 NLEELIRTFKQAHKAK--GPTLVHVATVKGKGYAIAEKDQVGYHAQKPFDLATGKAFPSK 314

Query: 236 ARTQ-SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
             T  SY+  FA AL   AE +  +V I AAM  GTGL+   +R P +  DVGIAEQHAV
Sbjct: 315 KPTPPSYSKVFAHALTTLAENNPKIVGITAAMATGTGLDKLQQRLPKQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QRAYDQ++HDV +QKLPV F +DRAG+VGADGPTH G 
Sbjct: 375 TLAAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D+ ++  +PN+V+MAP DEAEL  M+ T     D     RYPRG+GIG  L   +   P
Sbjct: 435 YDIAYLRLIPNIVLMAPKDEAELQRMLVTGIEYTDGAIAMRYPRGSGIGAPLME-DGWEP 493

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
           L +GKG IL  G+ + L+GYG  V S L  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 494 LPIGKGEILRNGDDILLIGYGAMVHSTLQVAEILSEHGISATVINARFVKPLDSELIAPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           AK    + T EEG + GGFGS V + L    +L   V  +   + D  +DH +PA+  A 
Sbjct: 554 AKQIGKVATFEEGCLMGGFGSAVCEALQDHDVL---VPVKRFGIGDVLVDHATPAESKAA 610

Query: 534 AGLTPSHIAATV 545
            GLTP+ +A ++
Sbjct: 611 HGLTPAQMAESI 622


>gi|358636219|dbj|BAL23516.1| 1-deoxy-D-xylulose-5-phosphate synthase [Azoarcus sp. KH32C]
          Length = 620

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/551 (47%), Positives = 344/551 (62%), Gaps = 35/551 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M  +R   G+SGF +R ESEYD FGT HSSTSISA LGMAV    +G     +AVIGDGA
Sbjct: 91  MSGLRHFGGISGFPRRCESEYDTFGTAHSSTSISAALGMAVAARDRGEDRRSIAVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           M+AG A+EA+NNAG + D++++VILNDN ++S+         PPVGAL+  L+R+ S   
Sbjct: 151 MSAGMAFEALNNAGDMRDTNLLVILNDN-EMSIS--------PPVGALTKILARMMSGST 201

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               R   + V   +  PM + A KV+E+ +G+I+    TLFEE G +Y GP+DGH++D 
Sbjct: 202 FNAARRAGEKVLG-VAPPMLDFARKVEEHVKGLITPG--TLFEEFGFHYYGPIDGHDLDA 258

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L+ +   K  GP  +HV+T KG+GY  AE     YHGV+KFD   G Q        
Sbjct: 259 LIPTLQNLSRLK--GPHFLHVITRKGQGYKLAEADPILYHGVSKFDHTAGIQTGKGGGKL 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +YT  F + L   A  D  +V I  AM  G+G+  F + FP R  DVGIAEQHAVTFAAG
Sbjct: 317 TYTQVFGDWLCDMAARDDKLVGITPAMREGSGMVRFAQEFPDRYHDVGIAEQHAVTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG +P  AIYS+F+QRAYDQ++HDV LQ LPV FA+DRAGLVGADG TH G+FD++F
Sbjct: 377 LACEGFRPVVAIYSTFLQRAYDQLIHDVALQNLPVLFAIDRAGLVGADGATHHGAFDLSF 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PN+VVMAPSDE E   M+ TA    + P+  RYPRG G+GV   P      L +GK
Sbjct: 437 LLCVPNLVVMAPSDENECRQMLYTAYR-HNGPTAVRYPRGGGLGVT--PETAMSELPIGK 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I   G++ ALL +G+ + + L A+  L++     TVA+ RF KPLD  LI  LA SH+
Sbjct: 494 GEIRRRGKKTALLVFGSLLGNALQAAEQLDA-----TVANMRFVKPLDAELIEELAMSHD 548

Query: 480 VLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLV----LPDRYIDHGSPADQLAQA 534
           +L+T+EE + IGG GS V + +        ++  RP V    LPD ++DHG       Q 
Sbjct: 549 LLVTIEENAVIGGAGSEVARLVE-------SLPQRPRVLRLGLPDHFVDHGDQTQLHEQV 601

Query: 535 GLTPSHIAATV 545
           GL  + I A +
Sbjct: 602 GLHTAGIVAAI 612


>gi|423693798|ref|ZP_17668318.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SS101]
 gi|388001385|gb|EIK62714.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           SS101]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/563 (45%), Positives = 355/563 (63%), Gaps = 34/563 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +R+ESEYD FG GHSSTSISA LGMA+   L+G +   +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRAESEYDTFGVGHSSTSISAALGMAIAARLQGSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART-Q 239
           +A L  +++ K  GP  +H+VT+KG+G+  AE     YH + K +P           +  
Sbjct: 270 IATLRNMRDLK--GPQFLHIVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKASGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V +  AM  G+ L  F  RFP R FDV IAEQHAVTFAAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGVTPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTFAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNAVIEKDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G + A L +G  +   L  +  +++     TV D RF KPLD AL+R +A  HE
Sbjct: 505 GIVRRQGSKTAFLVFGVQLAEALKVAEKIDA-----TVVDMRFVKPLDEALVREIAAGHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+TVEE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATVFNILGQTREALEIMSF 561
           + I A+V       RE L +++ 
Sbjct: 617 AGIEASV-------RERLALLNL 632


>gi|375309123|ref|ZP_09774404.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus sp. Aloe-11]
 gi|375078432|gb|EHS56659.1| 1-deoxy-d-xylulose-5-phosphate synthase [Paenibacillus sp. Aloe-11]
          Length = 632

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/540 (46%), Positives = 342/540 (63%), Gaps = 24/540 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ DGL GF KRSESE+D +  GHSSTS+SA +GMA+ RDLKG  N V+AVIGDGA+T
Sbjct: 89  TLRQRDGLCGFVKRSESEHDVWEAGHSSTSLSAAMGMALARDLKGEDNKVIAVIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A+EA+N+ G+   +++VILNDN+    P          VGA+ + LS+++S+R    
Sbjct: 149 GGMAFEALNHIGHERKNLMVILNDNEMSIAPN---------VGAMHNYLSKIRSDRHYLR 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++  + + K+I   GG + + A +V D     M+ G    LFEELGL Y+GPVDGH++ 
Sbjct: 200 AKDELEVLLKKIPAIGGKLAKSAGRVKDSLKYMMVPG---VLFEELGLTYLGPVDGHDLP 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+    +  N   TGPVL+HVVT KG+GY  AE  + K+HG++ +   +G+  K+    
Sbjct: 257 KLIETFHQADNV--TGPVLVHVVTTKGKGYKPAEADSHKWHGISPYKIESGQVLKAVGNP 314

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
             YT  F   LI  AE D+ ++A+  AM GG+GL  F   FPTR  DVGIAEQHA T  A
Sbjct: 315 M-YTEIFGRTLIELAEQDERIIAVTPAMPGGSGLVPFSEEFPTRMIDVGIAEQHAATMCA 373

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
            LA EGLKP  A+YS+FMQRAYDQ+VHD+      V FA+DRAG VGADG TH G FDV 
Sbjct: 374 ALAMEGLKPVFAVYSTFMQRAYDQIVHDICRHNANVMFAIDRAGFVGADGETHHGVFDVA 433

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+  +PN+V+M P DE EL HM+ TA   DD P  +RYPR N +GV L    K IP  +G
Sbjct: 434 FLRHIPNLVLMMPKDENELRHMMKTALDYDDGPIAYRYPRVNVVGVPLDSELKAIP--IG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              +L +GE  A++  G  +Q    A+  ++  GL++ V +ARF KP+D  ++R LA+ H
Sbjct: 492 SWELLRKGEGYAVIASGPMLQVATEAAETMKREGLQVGVVNARFLKPVDEDMLRELARQH 551

Query: 479 EVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             LI +EE S  G  GS V++F A++G+ +  V  R + +PD +++HGS  +Q A+ GLT
Sbjct: 552 TKLIVLEEASEAGSLGSAVLEFYAKEGIQNAQV--RLMGIPDIFVEHGSIKEQRAEVGLT 609


>gi|116748857|ref|YP_845544.1| deoxyxylulose-5-phosphate synthase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697921|gb|ABK17109.1| 1-Deoxy-D-xylulose-5-phosphate synthase [Syntrophobacter
           fumaroxidans MPOB]
          Length = 646

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 263/563 (46%), Positives = 344/563 (61%), Gaps = 32/563 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  G+SGF KRSES+YD FGTGHS TSISA LGM     LK      +AVIGDG+
Sbjct: 94  FHTLRQYGGISGFPKRSESKYDAFGTGHSGTSISAALGMTAAHSLKDSPCRAIAVIGDGS 153

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G A+EA+N+AG L  ++IV+LNDN ++S+         P VGALS+ LSR  S + L
Sbjct: 154 MTGGMAFEALNHAGDLAKNLIVVLNDN-EMSIS--------PNVGALSAFLSRKLSTKSL 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISG-SGSTLFEELGLYYIGPVDGHNVDD 179
             L++  +   + I G    +   V      +++  +   LF+ L  +YIGP+ GH +D 
Sbjct: 205 MNLKKEMERFVRTIPGLGTNIIQIVKRSMDSLVTFFTPGMLFQALDFHYIGPIKGHRLDR 264

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  L   +  +  GPVLIHV+TEKGRGYP AE     +HGV  FD ATGK  KS  ++ 
Sbjct: 265 LIETLRTAREIE--GPVLIHVMTEKGRGYPPAEIDPTSFHGVGAFDIATGKSLKSELKSP 322

Query: 240 -SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            SYT  F + +   A  D  VVAI AAM  GTGL  +  RFP R FDVGIAEQHAVTFAA
Sbjct: 323 PSYTKVFGDTISRLAYDDFKVVAITAAMLQGTGLECYSERFPDRFFDVGIAEQHAVTFAA 382

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+A EG KP  A+YS+F+QRA+DQ+VHDV LQ LPV FAMDR GLVG DGPTH G FD++
Sbjct: 383 GMAAEGFKPVVAVYSTFLQRAFDQIVHDVCLQNLPVVFAMDRGGLVGEDGPTHHGVFDLS 442

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDR-PSCFRYPRGNGIGVELPPGNKGIPLEV 417
           F+  +PNM++MAP DE EL HM+ T  A+D   P+  RYPRGNG GV +    + +P  V
Sbjct: 443 FLRIIPNMILMAPKDENELQHMLKT--ALDHHGPAAVRYPRGNGYGVAMDKNPETLP--V 498

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG +L EGE + L+G GT V   + A+  LE  G+   V +ARF KPLD  LI   A+ 
Sbjct: 499 GKGELLREGEDILLIGIGTTVYPAMEAAQRLERQGISAAVINARFVKPLDQDLIFDWARK 558

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRP-----LVLPDRYIDHGSPADQL 531
              ++T+EE  + GGFGS V++ L +       + + P     L +PD ++ HG  +   
Sbjct: 559 IGKIVTIEENVLQGGFGSAVLEMLQE-------ISFSPKSFVRLGIPDTFVVHGPQSTLR 611

Query: 532 AQAGLTPSHIAATVFNILGQTRE 554
              G+    I     N+L  TR+
Sbjct: 612 NLYGIDADGIENAALNLL-NTRD 633


>gi|333925872|ref|YP_004499451.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia sp. AS12]
 gi|333930825|ref|YP_004504403.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia plymuthica AS9]
 gi|386327696|ref|YP_006023866.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia sp. AS13]
 gi|333472432|gb|AEF44142.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia plymuthica AS9]
 gi|333489932|gb|AEF49094.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia sp. AS12]
 gi|333960029|gb|AEG26802.1| 1-deoxy-D-xylulose-5-phosphate synthase [Serratia sp. AS13]
          Length = 621

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 262/552 (47%), Positives = 344/552 (62%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GL  F  R+ESEYD    GHSSTSISAGLGMAV  + +G+    V VIGDGA
Sbjct: 95  ISTIRQKNGLHPFPWRAESEYDVLSVGHSSTSISAGLGMAVAAEREGKNRRTVCVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG ++ DM+V+LNDN ++S+           VGAL++ L++L S +  
Sbjct: 155 ITAGMAFEAMNHAGDINPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L
Sbjct: 206 STLREGGKKVLSGLP-PIKELVKRTEEHLKGMVVPG--TLFEELGFNYIGPVDGHDVQGL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           VA L+ +++ K  GP L+H++T+KGRGY  AEK    +H V KFDPA+G   KS+    S
Sbjct: 263 VATLKNMRDLK--GPQLLHIMTKKGRGYAPAEKDPISFHAVPKFDPASGTLPKSAGGQPS 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  ++AI  AM  G+G+  F R +P + FDV IAEQHAVTFAAGL
Sbjct: 321 YSKIFGDWLCETAAKDSSLMAITPAMREGSGMVQFSRDYPQQYFDVAIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQ++HDV +QKLPV FA+DR G+VGADG TH G+FD++FM
Sbjct: 381 AIGGYKPVVAIYSTFLQRAYDQLIHDVAIQKLPVMFAIDRGGIVGADGQTHQGAFDLSFM 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P MV+M PSDE E   M+ T    ++ PS  RYPRGNG G  L P      L +GKG
Sbjct: 441 RCIPTMVIMTPSDENECRQMLYTGYHYNEGPSAVRYPRGNGTGAPLEPLGA---LPIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  EGE+VA+L +GT     L   A   +  L  T+ D RF KPLD  L+  LA SHEV
Sbjct: 498 VVRREGEKVAILNFGT-----LLPEAAQVAEALNATLVDMRFVKPLDEQLVLELAASHEV 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L         V    + LPD ++  GS  +     GL  +
Sbjct: 553 LVTLEENAIMGGAGSGVNELLMAK---RRAVPVLNIGLPDSFVSQGSQEEVRVDLGLDAA 609

Query: 540 HIAATVFNILGQ 551
            I   +   L Q
Sbjct: 610 GIRRQIEAWLAQ 621


>gi|170719765|ref|YP_001747453.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida W619]
 gi|229836073|sp|B1J3G4.1|DXS_PSEPW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169757768|gb|ACA71084.1| deoxyxylulose-5-phosphate synthase [Pseudomonas putida W619]
          Length = 631

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/549 (46%), Positives = 349/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSARKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVAFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLEPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +GE+VALL +G  +     A AL  +  +  TV D RF KPLD AL+  LA SH +
Sbjct: 505 VIRRQGEKVALLVFGVQL-----AEALQVAEQINATVVDMRFVKPLDEALVLELAGSHAL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   ++      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTLEENAIMGGAGAAVGEFLASQAVI------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DAAGIEASV 622


>gi|425901814|ref|ZP_18878405.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
 gi|397892836|gb|EJL09312.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
          Length = 632

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/547 (47%), Positives = 349/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ DGL+ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MASLRQKDGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K DP  +       A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLDPLDSPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGEWLCDMAAADPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M++T   + + P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNATIEKDLQ--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G +VALL +G  +     A AL  ++ L  TV D RF KPLD AL+  +A SHE
Sbjct: 505 GVVRRQGSKVALLVFGVQL-----AEALKVADKLDATVVDMRFVKPLDEALVCEIAASHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGGAVGEFLAREAILKPILH---LGLPDLYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
           + I A +
Sbjct: 617 AGIEAAI 623


>gi|317492933|ref|ZP_07951357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316919055|gb|EFV40390.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 621

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/548 (47%), Positives = 345/548 (62%), Gaps = 26/548 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAGLGMAV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRDESEYDVLSVGHSSTSISAGLGMAVAAEREGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG + +DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIKADMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L A
Sbjct: 208 LREGGKKVLSGLP-PIKELVKRTEEHLKGMVVPG--TLFEELGFNYIGPVDGHDVQALAA 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP L+H++T+KG+GY  AEK    +H V KFDPA+G   KSS    +Y+
Sbjct: 265 TLKNMRDLK--GPQLLHIMTKKGKGYAPAEKDPISWHAVPKFDPASGTLPKSSGGLPTYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++A+  AM  G+G+  F + +P + FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETALDDNKLMAVTPAMREGSGMVRFSKEYPQQYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++F+ C
Sbjct: 383 GGYKPVVAIYSTFLQRAYDQVIHDVAMQKLPVMFAIDRAGIVGADGQTHQGAFDISFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +PN+V+M PSDE E   M+ T       P+  RYPRG+G G  L P      L +GKG +
Sbjct: 443 IPNLVIMTPSDENECRQMLHTGHQYQAGPTAVRYPRGSGTGATLEPLAS---LPIGKGVV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
             +GE++A+L +GT +   L A+  L +     TVAD RF KPLD ALI  LA +H+ L+
Sbjct: 500 RRKGEKIAILNFGTLMPDALTAAEQLNA-----TVADMRFVKPLDEALILELAATHDALV 554

Query: 483 TVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           T+EE + IGG GS V + L     +   V    L LPDR+I  G+  + L +  L    I
Sbjct: 555 TLEENAIIGGAGSGVNELLMSKRKM---VPVLNLGLPDRFIPQGTQEEALHEIQLDAQGI 611

Query: 542 AATVFNIL 549
              + N L
Sbjct: 612 VDQIQNWL 619


>gi|226311929|ref|YP_002771823.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus brevis NBRC
           100599]
 gi|254782062|sp|C0ZC10.1|DXS_BREBN RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|226094877|dbj|BAH43319.1| 1-deoxy-D-xylulose 5-phosphate synthase [Brevibacillus brevis NBRC
           100599]
          Length = 628

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/560 (45%), Positives = 358/560 (63%), Gaps = 26/560 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL GF K  ES +D + TGHSSTS+SA +GMA  RDLK  KN+VVAVIGDGA+T
Sbjct: 89  TLRQYKGLCGFPKMVESPHDVWETGHSSTSLSAAMGMATARDLKKEKNHVVAVIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A EA+N+ G+   ++IV+LNDN+    P          VGAL + L +++S    + 
Sbjct: 149 GGMALEALNHIGHERKNVIVVLNDNEMSIAPN---------VGALHNYLGKIRSTENYQW 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++  +G+ K I   GG +  +A +  D     ++SG    LFEELG  YIGP+DGHN++
Sbjct: 200 AKDEVEGLLKSIPAVGGKLAHMAERFKDSMKYLLVSG---VLFEELGFTYIGPIDGHNME 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+  L+  K+TK  GPVLIH +T+KG GY  AE  + K+HG+  +   +G   KS+   
Sbjct: 257 LLLDTLKTAKHTK--GPVLIHAITKKGLGYAPAEADSVKWHGIGTYKIESGDTPKSAP-- 312

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT+ FA+ ++  A+ D  +VA+  AM  G+GL  F +++P R FDVGIAEQHA TFAA
Sbjct: 313 -TYTSVFADTMMKLADEDHSIVAVTPAMPAGSGLIPFGQKYPDRLFDVGIAEQHACTFAA 371

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA +GLKP  AIYS+F+QRAYDQ++HDV  QKL V FA+DRAGLVGADG TH G +DV 
Sbjct: 372 GLATQGLKPVFAIYSTFLQRAYDQLIHDVARQKLHVIFAVDRAGLVGADGETHQGMYDVA 431

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM  +PNMV+MAP DE EL HM+ TA      P  +RYPR    GV++    + +P  +G
Sbjct: 432 FMRIIPNMVIMAPKDENELRHMMKTAVEYKGGPISYRYPRLPTRGVKMDEELQVLP--IG 489

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K  I+ EG+ VA+L +G   +   AA   L+  G++  + +ARFCKPLD  L+  LAK  
Sbjct: 490 KAEIVREGKHVAILSFGHVFEIAEAAVNQLQEEGIKPMLVNARFCKPLDEELLFRLAKEG 549

Query: 479 EVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             +ITVEEGS +GGFGS V++  ++ G     V+   + +PD +++HGS  +Q  + GLT
Sbjct: 550 YDIITVEEGSEMGGFGSAVIECYSRAGYHGMNVQI--VAVPDYFVEHGSVKEQRQEVGLT 607

Query: 538 PSHIAATVFNILGQTREALE 557
             HIAA V +++  ++  +E
Sbjct: 608 ADHIAARVRSLMPISKGVVE 627


>gi|126665231|ref|ZP_01736214.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. ELB17]
 gi|126630601|gb|EBA01216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Marinobacter sp. ELB17]
          Length = 656

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/564 (46%), Positives = 359/564 (63%), Gaps = 44/564 (7%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++R+ +GL+GF KR+ES YD FG GHSSTSISA LGMA+  + +G     +AVIGDGA
Sbjct: 104 MGSIRRKNGLAGFPKRTESPYDTFGVGHSSTSISAALGMAIASNQQGLTRKSIAVIGDGA 163

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+EA+N+AG+L +DM+VILNDN  +S+           VG LS+  ++L S+R  
Sbjct: 164 MTAGMAFEALNHAGHLKADMLVILNDN-DMSISRN--------VGGLSNYFAKLLSSRTY 214

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
            ++R+ +K V  +I   + ELA K +E+ +GMI+    TLFEELG  YIGP+DGH++  L
Sbjct: 215 HQMRDSSKKVL-EIAPGLRELAKKTEEHFKGMIAPG--TLFEELGFNYIGPIDGHDLPLL 271

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDP------ATGKQ--F 232
           V  LE ++  + +GP  +H+VT KG+G+  AE     YH + K +P      A+G     
Sbjct: 272 VETLENIR--ELSGPQFLHIVTTKGKGFAPAEADPIGYHAINKIEPMAATTVASGNPTPV 329

Query: 233 KSSARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQH 292
           KS      Y   F + L   A  D+ V+ I  AM  G+ L  F  RFP R FDV IAEQH
Sbjct: 330 KSGPAALKYANVFGQWLCDAAAADERVMGITPAMCEGSDLLAFAERFPARYFDVAIAEQH 389

Query: 293 AVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHC 352
           AVT AAG+AC+G KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH 
Sbjct: 390 AVTLAAGMACDGAKPVVAIYSTFLQRGYDQLIHDVAIQNLDVLFAIDRAGLVGEDGPTHA 449

Query: 353 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKG 412
           G+FD++++ C+PNMV+M PSDE E   ++ T   + + P+  RYPRG+G GVE+ P    
Sbjct: 450 GAFDISYLRCIPNMVLMTPSDENETRQLLHT-GLVHEGPAAVRYPRGSGSGVEIDPLLHT 508

Query: 413 IPLEVGKGRILIEGE------RVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPL 466
           +PL  GKGR++ E E      R+A+L +G  +   L A+  L++     TVAD RF KPL
Sbjct: 509 LPL--GKGRVVRERERKSASGRIAILNFGALLPRALKAAQALDA-----TVADMRFVKPL 561

Query: 467 DHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHG 525
           D  LIR LA+ H++L+T+EE +I GG GS V ++L Q+ +   T+    L LPD+++DHG
Sbjct: 562 DEDLIRQLAEQHDLLVTLEENAIAGGAGSAVCEWLNQEEI---TMPVLQLGLPDKFVDHG 618

Query: 526 SPADQLAQAGLTPSHIAATVFNIL 549
           S    L + GL     AAT+  I+
Sbjct: 619 SRNQLLEECGLD----AATIERII 638


>gi|399053796|ref|ZP_10742595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. CF112]
 gi|398048573|gb|EJL41045.1| 1-deoxy-D-xylulose-5-phosphate synthase [Brevibacillus sp. CF112]
          Length = 628

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/560 (45%), Positives = 357/560 (63%), Gaps = 26/560 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL GF K +ES +D + TGHSSTS+SA +GMA  RDLK  KN+VVA+IGDGA+T
Sbjct: 89  TLRQYKGLCGFPKMNESPHDVWETGHSSTSLSAAMGMATARDLKKEKNHVVAIIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A EA+N+ G+   ++IV+LNDN+    P          VGAL + L +++S    + 
Sbjct: 149 GGMALEALNHIGHERKNVIVVLNDNEMSIAPN---------VGALHNYLGKIRSTENYQW 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            ++  +G+ K I   GG +  +A +  D     ++SG    LFEELG  YIGP+DGHN++
Sbjct: 200 AKDEVEGLLKSIPAVGGKLASIAERFKDSMKYLLVSG---VLFEELGFTYIGPIDGHNME 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            LV  L+  K TK  GPVLIH +T+KG+GY  AE  + K+HG+  +   +G   KS+   
Sbjct: 257 LLVDTLKTAKQTK--GPVLIHAITKKGKGYAPAEADSVKWHGIGTYKIESGDTPKSAP-- 312

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +YT+ FAE +I  A  DK +VA+  AM  G+GL  F +++P R FDVGIAEQHA TFAA
Sbjct: 313 -TYTSVFAETMIELAAEDKSLVAVTPAMPAGSGLIPFGQKYPDRLFDVGIAEQHACTFAA 371

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLA +GLKP  AIYS+F+QRAYDQ++HDV  QKL V FA+DRAGLVGADG TH G +D+ 
Sbjct: 372 GLATQGLKPVLAIYSTFLQRAYDQLIHDVARQKLNVVFAVDRAGLVGADGETHQGMYDIA 431

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM  +PNMV+MAP DE EL HM+ TA A ++ P  +RYPR    GV L    + +P  +G
Sbjct: 432 FMRIIPNMVIMAPKDENELRHMMKTAMAYNEGPISYRYPRLPARGVPLDRELQVLP--IG 489

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           K  I+ EG++VA+L +G   +    A   L + G+R  + +ARFCKPLD  L+  LAK  
Sbjct: 490 KAEIVREGKQVAILSFGHVFELAEQAVNQLNAEGIRPMLVNARFCKPLDEELLFRLAKEG 549

Query: 479 EVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             ++TVEEG  +GGFGS V++   + G     V  + + +PD +++HGS  +Q  +  LT
Sbjct: 550 YDIVTVEEGCEMGGFGSAVIECYNRAGY--HGVNVQVVAVPDYFVEHGSVKEQRQEVELT 607

Query: 538 PSHIAATVFNILGQTREALE 557
             +IA+ V  ++  ++  LE
Sbjct: 608 VENIASRVRALMPISKGVLE 627


>gi|163782598|ref|ZP_02177595.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882171|gb|EDP75678.1| 1-deoxy-D-xylulose-5-phosphate synthase [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 628

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/553 (46%), Positives = 354/553 (64%), Gaps = 23/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ  G++GF +R ES YD FG GHSSTSISA LG  V +D+KG  ++V+AVIGDGA
Sbjct: 92  FHTLRQHGGIAGFLRREESPYDAFGAGHSSTSISAALGFRVAKDMKGDDSHVIAVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG A+EA+NNAG+L  +  IVILNDN ++S+         P VGA+S+ L+R+ S   
Sbjct: 152 MTAGMAFEALNNAGHLRPNRFIVILNDN-EMSIS--------PNVGAISTYLNRIISGHF 202

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           ++E R+  K + K  G          +E+ +G+IS     LFEELG  YIG VDGHN+  
Sbjct: 203 VQESRQRIKSLLKHFGETPLRFMKLTEEFLKGLISPG--VLFEELGFNYIGVVDGHNIAA 260

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L   L+ VK+ +  GPVL+HV T+KG+GYP+AE+   K+HGVA +   +G+  K  +   
Sbjct: 261 LEKTLKNVKDIE--GPVLLHVATKKGKGYPHAEEDPVKWHGVAPYKVESGEIIKKPS-PP 317

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           S+T+ F +A++  AE+D  +V I  AM  G+GL  F +RFP R FDVGIAEQHA TFA G
Sbjct: 318 SWTSVFGKAVVELAEMDDRIVVITPAMREGSGLVEFSKRFPDRFFDVGIAEQHAATFAGG 377

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG++P  + YS+F+QRAYDQV+HD+ LQKLPV FA+DR GLVG DGPTH G FD+++
Sbjct: 378 LACEGMRPIASYYSTFLQRAYDQVIHDIALQKLPVTFAIDRGGLVGDDGPTHHGVFDLSY 437

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+PNMVV AP DE EL +++ TA      P   RYPRG   GV   P      +E+G 
Sbjct: 438 LRCVPNMVVSAPKDEQELRNLLYTAVK-SGLPFSVRYPRGAAYGV---PTEDFQEIEIGS 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
              L+EGE + +L  G  V   L A+  L   G+R+ V +ARF KP+D  L+  L   ++
Sbjct: 494 WEELLEGEELVILATGYPVYQALRAAERLYKEGIRVGVVNARFIKPMDEKLLEELTARYD 553

Query: 480 VLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           + +TVE+ + +GGFG+ V++F A+ G+    V    L +PDR+I+HG+     +  G+  
Sbjct: 554 LFLTVEDNTVVGGFGTGVLEFFARKGVAKRVVN---LGVPDRFIEHGNQNLLRSMVGIDS 610

Query: 539 SHIAATVFNILGQ 551
             I   V ++L +
Sbjct: 611 EGIERVVKDLLAK 623


>gi|254228605|ref|ZP_04922029.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio sp. Ex25]
 gi|262395027|ref|YP_003286881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio sp. Ex25]
 gi|151938784|gb|EDN57618.1| 1-deoxy-D-xylulose-5-phosphate synthase [Vibrio sp. Ex25]
 gi|262338621|gb|ACY52416.1| 1-deoxy-D-xylulose 5-phosphate synthase [Vibrio sp. Ex25]
          Length = 621

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/552 (46%), Positives = 351/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL  F  R ESEYD    GHSSTSISAGLGMA+    +G+   +V+VIGDGA
Sbjct: 95  MPTIRQKDGLHPFPWREESEYDTLSVGHSSTSISAGLGMAISAQKEGKGRKIVSVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L+++ S    
Sbjct: 155 ITAGMAFEAMNHAGDVHPDMLVILNDN-EMSISEN--------VGALNNHLAKVLSGSLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K V   +  P+ EL  + +E+ +GM+     TLFEE G  YIGP+DGH+V++L
Sbjct: 206 TSIREGGKKVLSGVP-PIKELVRRTEEHLKGMVVPG--TLFEEFGFNYIGPIDGHDVNEL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ ++  K  GP  +H++T+KG+GY  AEK    YHGV KFDP      KSS    +
Sbjct: 263 VKTLKNMRELK--GPQFLHIMTKKGKGYEPAEKDPIGYHGVPKFDPTHNCLPKSSGGKPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  ++AI  AM  G+G+  F + +P + FDV IAEQHAVT A G+
Sbjct: 321 YSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPDQYFDVAIAEQHAVTLATGM 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G  P  AIYS+F+QR YDQ++HD+ +  LPV FA+DRAGLVGADG TH G+FD++FM
Sbjct: 381 AIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFM 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MAPSDE E   M+ T       PS  RYPRG+G+GVE+    +   LE+GKG
Sbjct: 441 RCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGVEIE--TEFTALEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +GE+VA+L +GT + + L A+  L +     TVAD RF KPLD ALIR LA  H+V
Sbjct: 498 RMVRQGEKVAILNFGTFLGNALEAAEYLNA-----TVADMRFVKPLDEALIRQLAADHDV 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE  I GG G+ VV+F+ +D ++   +    + LPD +I  G+  +   + GL   
Sbjct: 553 LVTLEENVIAGGAGAGVVEFMMKDKIIKPVLN---IGLPDEFIHQGTQDELHEELGLDAK 609

Query: 540 HIAATVFNILGQ 551
            I  ++ + L +
Sbjct: 610 GIEKSILDYLAK 621


>gi|53728900|ref|ZP_00134615.2| COG1154: Deoxyxylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207695|ref|YP_001052920.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165975663|ref|YP_001651256.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149479|ref|YP_001968004.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303252030|ref|ZP_07338201.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245020|ref|ZP_07527117.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247194|ref|ZP_07529245.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307253973|ref|ZP_07535825.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258428|ref|ZP_07540169.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262798|ref|ZP_07544425.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|166198593|sp|A3MYS9.1|DXS_ACTP2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229807523|sp|B3H050.1|DXS_ACTP7 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229807524|sp|B0BSL0.1|DXS_ACTPJ RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|126096487|gb|ABN73315.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875764|gb|ABY68812.1| 1-deoxyxylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914610|gb|ACE60862.1| 1-deoxy-D-xylulose-5-phosphate synthase (DXPS) [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649460|gb|EFL79645.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854185|gb|EFM86393.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306856332|gb|EFM88484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306863177|gb|EFM95119.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867612|gb|EFM99459.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871943|gb|EFN03660.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 617

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 258/555 (46%), Positives = 347/555 (62%), Gaps = 33/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ +G+  F  R ES YD    GHSSTSISAG+G+AV  + +      V VIGDGA
Sbjct: 92  MHTIRQKNGIHPFPWREESLYDVLSVGHSSTSISAGVGIAVAAEKENAGRKTVCVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 152 ITAGMAFEAMNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSIY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ +K V  ++   +     K +E+ +G+IS   STLFEELG  YIGP+DGHN+D+L
Sbjct: 203 TTVRDGSKKVLDKVP-TIKNFMKKSEEHMKGVISPE-STLFEELGFNYIGPIDGHNIDEL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  ++  K  GP  +H+ T+KG+GY  AE     YHGV KFDP  G Q   S    +
Sbjct: 261 VKTLSNMRELK--GPQFLHIRTKKGKGYEPAENDPIGYHGVPKFDPTCG-QLPKSKTIPT 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F   L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTF AGL
Sbjct: 318 YSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYSSF+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FDV+FM
Sbjct: 378 AIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDVSFM 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +M PSDE E+  M+ TA  + + P+  RYPRGN  GV L P      LEVGKG
Sbjct: 438 RCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVRYPRGNAQGVALAPMQA---LEVGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ +G++VA+L +G      L   A + +     T+AD RF KPLD  L+  LA SHE+
Sbjct: 494 KLIQQGQKVAILNFGP-----LLNEARIVAEKHNYTLADMRFVKPLDEQLVAELADSHEL 548

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG GS V ++L + G      K RPLV+   PD ++   + A+  A  GL
Sbjct: 549 LVTLEENAIQGGAGSAVNEYLQKIG------KIRPLVMLGIPDFFVPQATQAESYADLGL 602

Query: 537 TPSHIAATVFNILGQ 551
             + I   +  ++ Q
Sbjct: 603 DAAGIEQRIQAVVNQ 617


>gi|401762515|ref|YP_006577522.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cloacae
           subsp. cloacae ENHKU01]
 gi|400174049|gb|AFP68898.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cloacae
           subsp. cloacae ENHKU01]
          Length = 620

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/544 (47%), Positives = 346/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + + ++   V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKENKQRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIKPDMLVILNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  LV 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLVT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGMPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R++P + FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKYPDQYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++F+ C
Sbjct: 383 GGYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P+MV+M PSDE E   M+ T     D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPDMVIMTPSDENECRQMLFTGYHYQDGPSAVRYPRGNAVGVELQPLEK---LAIGKGLV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE+VA+L +GT     L   A   +  L  T+ D RF KPLD +LI +LA++H+VL+
Sbjct: 500 KRRGEKVAILNFGT-----LMPEAAKVAETLNATLVDMRFVKPLDESLILNLAETHDVLV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           T+EE +I GG GS V + L  +      V    L LPD +I  G+  +  A  GL  + I
Sbjct: 555 TLEENAIMGGAGSGVNEVLMAN---RNVVPVLNLGLPDHFIPQGTQDEARAAIGLDAAGI 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|209528155|ref|ZP_03276628.1| deoxyxylulose-5-phosphate synthase [Arthrospira maxima CS-328]
 gi|423064948|ref|ZP_17053738.1| deoxyxylulose-5-phosphate synthase [Arthrospira platensis C1]
 gi|209491414|gb|EDZ91796.1| deoxyxylulose-5-phosphate synthase [Arthrospira maxima CS-328]
 gi|406714191|gb|EKD09359.1| deoxyxylulose-5-phosphate synthase [Arthrospira platensis C1]
          Length = 638

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/551 (45%), Positives = 347/551 (62%), Gaps = 23/551 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           +T+RQ DG++G+ KR ES +D FG GH+STSISA LGMA+ RD++G    VVA+IGDGAM
Sbjct: 88  NTLRQKDGVAGYLKRCESRFDHFGAGHASTSISAALGMALARDMQGDNYKVVAIIGDGAM 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L +++++V+LNDN+    P          VGA+   L++++ + P+
Sbjct: 148 TGGMALEAINHAGHLPNTNLMVVLNDNEMSISPN---------VGAIPRYLNKMRLSPPV 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL---FEELGLYYIGPVDGHNV 177
           + L++  +   KQI         +++    GM   +   L    EELG  YIGPVDGHN+
Sbjct: 199 QFLKDNLREQFKQIPFVGENFTPEMERLKEGMKRLAVPKLGAIIEELGFTYIGPVDGHNL 258

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA- 236
           +DL+   ++    K  GPV++HV T KG+GY  AEK    YH  + F+ ATGK   S+  
Sbjct: 259 EDLIETFQQAHEIK--GPVMVHVSTVKGKGYAIAEKDQVGYHAQSPFNLATGKAIPSNKP 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +  SY+  FA+ L+  AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAVT 
Sbjct: 317 KPPSYSKVFADTLVKLAEDNSQILGITAAMATGTGLDKLQAKLPEQYIDVGIAEQHAVTL 376

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VG DGPTH G +D
Sbjct: 377 AAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGVDGPTHQGMYD 436

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PL 415
           + ++ CLPNM +MAP DEAEL  M+ T       P   RYPRG+G GV  P   +G  P+
Sbjct: 437 IAYLRCLPNMTIMAPKDEAELQQMLVTGINHTSGPIAMRYPRGSGNGV--PLMEEGWEPI 494

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            +GKG IL +G+ + LLGYGT V + +  + +L  +G+  TV +ARF KPLD  LI  LA
Sbjct: 495 AIGKGEILRQGDDLLLLGYGTMVNTAMQVAEILGEHGIDATVVNARFVKPLDTELIVPLA 554

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           +    ++T+EEG I GGFGS V + L    +L   V  +   +PD+ +DH +P       
Sbjct: 555 QKIGKVVTLEEGCIMGGFGSAVAEALLDHDVL---VPVKRFGIPDQLVDHATPDQSKVDL 611

Query: 535 GLTPSHIAATV 545
           GLT S IA  +
Sbjct: 612 GLTSSQIAEKI 622


>gi|332283716|ref|YP_004415627.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pusillimonas sp. T7-7]
 gi|330427669|gb|AEC19003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pusillimonas sp. T7-7]
          Length = 594

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/548 (47%), Positives = 349/548 (63%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G+SGF KRSESEYD FGT HSSTSISA LGMAV     G     +AVIGDGA
Sbjct: 61  MATLRQKGGISGFPKRSESEYDAFGTAHSSTSISAVLGMAVASRNAGLDRQHIAVIGDGA 120

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           MTAG  +EA+NNAG   D +++VILNDN  +S+         PPVGAL+   +RL S R 
Sbjct: 121 MTAGMVFEALNNAGVTPDVNVLVILNDN-DMSIS--------PPVGALNHYFARLLSGRF 171

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
               + V + V + +  P+ E A +++ +A+G++S +  TLFEELG  Y+GP+DGH++D 
Sbjct: 172 YAAAKNVGRAVLQHVP-PVLEFARRIEGHAKGIVSPA--TLFEELGFNYVGPIDGHDLDA 228

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  LE +K     G   +HVVT+KG+GY  AE     YHG  KFDP+ G Q       Q
Sbjct: 229 LVPTLENLK--LLGGLQFLHVVTKKGQGYKLAEADPVLYHGPGKFDPSVGIQKPKEPPKQ 286

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           ++T  F   L   AE D+ ++ I  AM  G+G+  F +R+P R FDVGIAEQHAVTFAAG
Sbjct: 287 TFTKVFGRWLCDMAESDQRLLGITPAMREGSGMVEFEQRYPDRYFDVGIAEQHAVTFAAG 346

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LACEG KP  AIYS+F+QR YDQ++HDV LQ L V FA+DRAG+VGADG TH G++D+ +
Sbjct: 347 LACEGQKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFALDRAGIVGADGATHAGNYDIAY 406

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP-LEVG 418
           + C+PNM+V  PSDE E   +++T       P+  RYPRG G G    P +KG+  + VG
Sbjct: 407 LRCVPNMIVATPSDENETRLLLSTCYE-HPGPASVRYPRGAGCGA---PESKGLDVVPVG 462

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  EG  +ALL +GT     LA +AL  +  L  TV D RF KPLD  L++ L+ +H
Sbjct: 463 KGVLRREGRHIALLAFGT-----LAGAALQAAENLDATVVDMRFVKPLDETLLQELSSTH 517

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           +  +T+E+ +I GG GS V++F +Q G++   ++   L LPD +IDHG     LA+ GL 
Sbjct: 518 QAFVTIEDAAIMGGAGSAVLEFFSQKGIVCPVLQ---LGLPDLFIDHGDQTAILAELGLN 574

Query: 538 PSHIAATV 545
            + I  ++
Sbjct: 575 AAGIEGSI 582


>gi|416281027|ref|ZP_11645597.1| 1-deoxy-D-xylulose 5-phosphate synthase [Shigella boydii ATCC 9905]
 gi|320181598|gb|EFW56513.1| 1-deoxy-D-xylulose 5-phosphate synthase [Shigella boydii ATCC 9905]
          Length = 620

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/544 (47%), Positives = 343/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+  S  TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPS--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F   L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGNWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|376004243|ref|ZP_09781985.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Arthrospira sp. PCC 8005]
 gi|375327379|emb|CCE17738.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Arthrospira sp. PCC 8005]
          Length = 624

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/551 (45%), Positives = 350/551 (63%), Gaps = 23/551 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           +T+RQ DG++G+ KR ES +D FG GH+STSISA LGMA+ RD++G    VVA+IGDGAM
Sbjct: 74  NTLRQKDGVAGYLKRCESRFDHFGAGHASTSISAALGMALARDMQGDNYKVVAIIGDGAM 133

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG+L +++++V+LNDN ++S+         P VGA+   L++++ + P+
Sbjct: 134 TGGMALEAINHAGHLPNTNLMVVLNDN-EMSIS--------PNVGAIPRYLNKMRLSPPV 184

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTL---FEELGLYYIGPVDGHNV 177
           + L++  +   KQI         +++    GM   +   L    EELG  YIGPVDGHN+
Sbjct: 185 QFLKDNLREQFKQIPFVGENFTPEMERLKEGMKRLAVPKLGAIIEELGFTYIGPVDGHNL 244

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA- 236
           +DL+   ++    K  GPV++HV T KG+GY  AEK    YH  + F+ ATGK   S+  
Sbjct: 245 EDLIETFQQAHEIK--GPVMVHVSTVKGKGYAIAEKDQVGYHAQSPFNLATGKAIPSNKP 302

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +  SY+  FA+ L+  AE +  ++ I AAM  GTGL+    + P +  DVGIAEQHAVT 
Sbjct: 303 KPPSYSKVFADTLVKLAEDNSQILGITAAMATGTGLDKLQAKLPEQYIDVGIAEQHAVTL 362

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VG DGPTH G +D
Sbjct: 363 AAGLACEGMRPVVAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGVDGPTHQGMYD 422

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PL 415
           + ++ CLPNM +MAP DEAEL  M+ T       P   RYPRG+G GV  P   +G  P+
Sbjct: 423 IAYLRCLPNMTIMAPKDEAELQQMLVTGINHTSGPIAMRYPRGSGNGV--PLMEEGWEPI 480

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
            +GKG IL +G+ + LLGYGT V + +  + +L  +G+  TV +ARF KPLD  LI  LA
Sbjct: 481 AIGKGEILRQGDDLLLLGYGTMVNTAMQVAEILGEHGIDATVVNARFVKPLDTELIVPLA 540

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           +    ++T+EEG I GGFGS V + L    +L   V  +   +PD+ +DH +P       
Sbjct: 541 QKIGKVVTLEEGCIMGGFGSAVAEALLDHDVL---VPVKRFGIPDQLVDHATPDQSKVDL 597

Query: 535 GLTPSHIAATV 545
           GLT S IA  +
Sbjct: 598 GLTSSQIAEKI 608


>gi|374301292|ref|YP_005052931.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554228|gb|EGJ51272.1| 1-deoxy-D-xylulose-5-phosphate synthase [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 666

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/556 (46%), Positives = 357/556 (64%), Gaps = 24/556 (4%)

Query: 1   MHTMRQTDGLSGFTKRSES-EYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDG 59
            HT+RQ  G+SGF + +ES EYD FG GHSSTSISA LGMA+ RDL G+K+NV++VIGDG
Sbjct: 122 FHTLRQLGGISGFPRIAESPEYDHFGVGHSSTSISAALGMALARDLGGKKHNVLSVIGDG 181

Query: 60  AMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +MTAG AYE +N AG +  DM+V+LNDN ++S+           VGALS  LSR  S   
Sbjct: 182 SMTAGLAYEGLNQAGGMGLDMVVVLNDN-EMSISKN--------VGALSLFLSRKLSGPL 232

Query: 120 LRELREVAKGVTK---QIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           L +L+   +G  K   +IG  + + A + ++  +G+ +     LF+  G  Y+GP++GH+
Sbjct: 233 LTKLKREVEGFLKSVPRIGEDLLKYARRSEDSFKGLFTPG--MLFQSFGFNYLGPINGHD 290

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFK-SS 235
           +++L+ I E+V+N K  GP+L+HV+T+KG+GY  AEK    +HGV  F+P TG+  K  +
Sbjct: 291 LEELIEIFEQVRNLK--GPILVHVLTKKGKGYAPAEKNPTYFHGVGCFEPETGQALKYGN 348

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
               S+T  F + L   A  D+ ++AI AAM  GTGL  F   FP+R  DVGI EQHAVT
Sbjct: 349 CSYPSFTEVFGQTLCELARQDEKIIAITAAMPEGTGLTRFREEFPSRFVDVGICEQHAVT 408

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
           FAAGLA +G +P  AIYS+F+QR+YDQ+VHDV LQ LPV F +DR GLVG DGPTH G F
Sbjct: 409 FAAGLASQGFRPVVAIYSTFLQRSYDQIVHDVCLQNLPVSFFLDRGGLVGEDGPTHHGVF 468

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPL 415
           D++F+  +PN+V+MAP DEAEL  MV TA +  + P   RYPRG G+G  L  G   +PL
Sbjct: 469 DLSFLRHIPNLVIMAPKDEAELRLMVKTALS-HNGPCAVRYPRGVGLGSPLSDGLNPMPL 527

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLE-SNGLRLTVADARFCKPLDHALIRSL 474
             G+G +L EG+   L+  G  V   LAA+  LE  +GL++ V +ARF KPL  A +  L
Sbjct: 528 --GQGELLREGKDALLVAIGNRVHPSLAAAERLEREDGLQVAVFNARFVKPLPEAQLMEL 585

Query: 475 AKSHEVLITVEEG-SIGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+  + ++ VEE    GGFGS V++ LA   +L G    R   +PD +++HGS ++  A+
Sbjct: 586 AERFKTILLVEENVQAGGFGSAVLELLASKDMLSGRT-IRQQGIPDIFVEHGSQSELRAR 644

Query: 534 AGLTPSHIAATVFNIL 549
             L  + IA  V  +L
Sbjct: 645 LALNEAGIARAVREVL 660


>gi|428318404|ref|YP_007116286.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria nigro-viridis
           PCC 7112]
 gi|428242084|gb|AFZ07870.1| 1-deoxy-D-xylulose-5-phosphate synthase [Oscillatoria nigro-viridis
           PCC 7112]
          Length = 635

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/565 (43%), Positives = 353/565 (62%), Gaps = 25/565 (4%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RDLKG     VAVIGDGA+
Sbjct: 88  HTLRQKDGVAGYLKRCESKFDHFGAGHASTSISAALGMAMARDLKGENFKTVAVIGDGAL 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           T G A EA+N+AG++  ++++V+LNDN+    P          VGA++  L++++ + P+
Sbjct: 148 TGGMALEAINHAGHMPKTNLLVVLNDNEMSISPN---------VGAITRYLNKMRLSPPV 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHN 176
           + L++  +   K I         +++    GM    +S  G+ + EELG  Y+GPVDGHN
Sbjct: 199 QFLKDNLEEQFKHIPFVGETFTPEMERLKEGMKRLAVSKVGAVI-EELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L+A  ++    +  GPVL+HVVT KG+GY  AEK    YH    F+ ATGK   S+ 
Sbjct: 258 LEELIATFKQAHTIQ--GPVLVHVVTVKGKGYAIAEKDQVGYHAQNPFNLATGKGLPSTK 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  +Y+  FA AL+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPAYSKVFAHALVKLAENNPKIVGITAAMATGTGLDKLQEKLPKQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            +AGLACEG++P  AIYS+F+QR YDQ++HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LSAGLACEGMRPVVAIYSTFVQRGYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGIP 414
           D++F+ CLPNM +MAP DEAEL  MV T       P   RYPRGNG GV L   G + +P
Sbjct: 436 DISFLRCLPNMTIMAPKDEAELQRMVVTGINHTSGPIAMRYPRGNGYGVPLMEEGWEEVP 495

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GK  IL  G+ + +LGYG+ V   +  + +L  +G+  TV +ARF KPLD  LI  L
Sbjct: 496 --IGKAEILRNGDDLLILGYGSMVYPAMQTAEILSEHGIEATVINARFVKPLDTELILPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T+EEG + GGFGS V + L  + ++   ++   L +PD  +DH +P    A 
Sbjct: 554 AQRIGKVVTMEEGCLMGGFGSAVAEALLDNNVVVPVMR---LGVPDTLVDHATPEQSFAS 610

Query: 534 AGLTPSHIAATVFNILGQTREALEI 558
            GL PS +   +     + +  + +
Sbjct: 611 LGLNPSQMCDRILATFSRKQSPVSV 635


>gi|303250727|ref|ZP_07336923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251739|ref|ZP_07533643.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650397|gb|EFL80557.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860825|gb|EFM92834.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 617

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 258/555 (46%), Positives = 347/555 (62%), Gaps = 33/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ +G+  F  R ES YD    GHSSTSISAG+G+AV  + +      V VIGDGA
Sbjct: 92  MHTIRQKNGIHPFPWREESLYDVLSVGHSSTSISAGVGIAVAAEKENAGRKTVCVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 152 ITAGMAFEAMNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSIY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ +K V  ++   +     K +E+ +G+IS   STLFEELG  YIGP+DGHN+D+L
Sbjct: 203 TTVRDGSKKVLDKVP-TIKNFMKKSEEHMKGVISPE-STLFEELGFNYIGPIDGHNIDEL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  ++  K  GP  +H+ T+KG+GY  AE     YHGV KFDP  G Q   S    +
Sbjct: 261 VKTLSNMRELK--GPQFLHIRTKKGKGYEPAENDPIGYHGVPKFDPTCG-QLPKSKTIPT 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F   L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTF AGL
Sbjct: 318 YSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYSSF+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FDV+FM
Sbjct: 378 AIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDVSFM 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +M PSDE E+  M+ TA  + + P+  RYPRGN  GV L P      LEVGKG
Sbjct: 438 RCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVRYPRGNAQGVVLAPMQA---LEVGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ +G++VA+L +G      L   A + +     T+AD RF KPLD  L+  LA SHE+
Sbjct: 494 KLIQQGQKVAILNFGP-----LLNEARIVAEKHNYTLADMRFVKPLDEQLVAELADSHEL 548

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG GS V ++L + G      K RPLV+   PD ++   + A+  A  GL
Sbjct: 549 LVTLEENAIQGGAGSAVNEYLQKIG------KIRPLVMLGIPDFFVPQATQAESYADLGL 602

Query: 537 TPSHIAATVFNILGQ 551
             + I   +  ++ Q
Sbjct: 603 DAAGIEQRIQAVVNQ 617


>gi|432368399|ref|ZP_19611504.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE10]
 gi|430888865|gb|ELC11536.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE10]
          Length = 620

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/544 (47%), Positives = 344/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+ +F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVVFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPDAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|56751096|ref|YP_171797.1| 1-deoxy-D-xylulose-5-phosphate synthase [Synechococcus elongatus
           PCC 6301]
 gi|118595625|sp|Q9R6S7.2|DXS_SYNP6 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|56686055|dbj|BAD79277.1| 1-deoxyxylulose-5-phosphate synthase [Synechococcus elongatus PCC
           6301]
          Length = 636

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/557 (44%), Positives = 349/557 (62%), Gaps = 24/557 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR+E+ +D FG GH+STSISA LGMA+ RD +G     VAVIGDG+
Sbjct: 87  FHTLRQKDGIAGYLKRTENRFDHFGAGHASTSISAALGMALARDAQGEDYRCVAVIGDGS 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN     P          VGALS  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTRLLVVLNDNDMSISPN---------VGALSRYLNKIRVSEP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ L +      +QI   GG + +    V E  + +       +FEELG  Y+GPVDGHN
Sbjct: 198 MQLLTDGLTQGMQQIPFVGGAITQGFEPVKEGMKRLSYSKIGAVFEELGFTYMGPVDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSS 235
           +++L+A   E    K TGPVL+HV T KG+GYPYAE+    YH    FD ATGK +  S 
Sbjct: 258 LEELIATFREAH--KHTGPVLVHVATTKGKGYPYAEEDQVGYHAQNPFDLATGKAKPASK 315

Query: 236 ARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  S++  F + L   A+ D+ +V I AAM  GTGL++  +  P +  DVGIAEQHAV 
Sbjct: 316 PKPPSHSKVFGQTLTTLAKSDRRIVGITAAMATGTGLDILQKALPKQYIDVGIAEQHAVV 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAG+AC+G++P  AIYS+F+QRA+DQV+HDV +QKLPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGMACDGMRPVVAIYSTFLQRAFDQVIHDVCIQKLPVFFCLDRAGIVGADGPTHQGMY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELP-PGNKGIP 414
           D+ ++  +PNMV+MAP DEAEL  M+ T    D  P   R+PRGNGIGV LP  G + +P
Sbjct: 436 DIAYLRLIPNMVLMAPKDEAELQRMLVTGIEYDG-PIAMRFPRGNGIGVPLPEEGWESLP 494

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GK   L +G+ + +L YG+ V   L  + LL  +G+  TV +ARF KPLD  LI  L
Sbjct: 495 --IGKAEQLRQGDDLLMLAYGSMVYPALQTAELLNEHGISATVINARFAKPLDEELIVPL 552

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           A+    ++T EEG + GGFGS +++ L    L    V   P+ +PD  ++H SP +   +
Sbjct: 553 ARQIGKVVTFEEGCLPGGFGSAIMESLQAHDL---QVPVLPIGVPDLLVEHASPDESKQE 609

Query: 534 AGLTPSHIAATVFNILG 550
            GLTP  +A  +    G
Sbjct: 610 LGLTPRQMADRILEKFG 626


>gi|110640681|ref|YP_668409.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 536]
 gi|118595579|sp|Q0TKM1.1|DXS_ECOL5 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|110342273|gb|ABG68510.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli 536]
          Length = 620

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/544 (47%), Positives = 343/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KCRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVSVLNIGLPDFFIPQGTQEEMRAELGLDATGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|339485459|ref|YP_004699987.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida S16]
 gi|338836302|gb|AEJ11107.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas putida S16]
          Length = 631

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/549 (46%), Positives = 349/549 (63%), Gaps = 32/549 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  G++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MLSLRQKGGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +++DM+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAQEVNADMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  +
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTM 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +PA        A    
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPADKPAAPKKASGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG+
Sbjct: 328 YSAVFGQWLCDMAAADNRLVGITPAMKEGSDLVEFSERYPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GS+D++++
Sbjct: 388 ACEGSKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSYDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M++T   + + P+  RYPRG G     P      PLE+GKG
Sbjct: 448 RCIPGMLVMTPSDENELRKMLST-GHLYNGPAAVRYPRGTGPNA--PISGDLEPLEIGKG 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +GE+VALL +G  +     A A+  +  +  TV D RF KPLD AL+  LA SHE+
Sbjct: 505 VVRRQGEKVALLVFGVQL-----AEAMQVAEQINATVVDMRFVKPLDEALVLELAASHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG G+ V +FLA   ++      +PL+   LPD Y++H  PA  LA+ GL
Sbjct: 560 LVTIEENAIMGGAGAAVGEFLASQAIV------KPLLHLGLPDIYVEHAKPAQMLAECGL 613

Query: 537 TPSHIAATV 545
             + I A+V
Sbjct: 614 DAAGIEASV 622


>gi|152999875|ref|YP_001365556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS185]
 gi|217974161|ref|YP_002358912.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS223]
 gi|373948751|ref|ZP_09608712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS183]
 gi|386325408|ref|YP_006021525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica BA175]
 gi|166201536|sp|A6WL04.1|DXS_SHEB8 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|254782084|sp|B8EAU7.1|DXS_SHEB2 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|151364493|gb|ABS07493.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS185]
 gi|217499296|gb|ACK47489.1| deoxyxylulose-5-phosphate synthase [Shewanella baltica OS223]
 gi|333819553|gb|AEG12219.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica BA175]
 gi|373885351|gb|EHQ14243.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella baltica OS183]
          Length = 622

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 263/553 (47%), Positives = 349/553 (63%), Gaps = 27/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ DGL  F  R ESEYD F  GHS TSISA L MA+  + +     VVAVIGDGA
Sbjct: 95  MHTIRQKDGLHPFPWREESEYDTFSVGHSGTSISAALAMAIAAEKEQAGRKVVAVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G  +EAMN+AG L +DM+V+LNDN ++S+           VGAL++ L++L S R  
Sbjct: 155 MTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISEN--------VGALNNHLAQLMSGRFY 205

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             LRE  K V K  G P + E+A + +E+ +GM+     TLFEELG  YIGP+DGH+VD 
Sbjct: 206 TTLREGGKKVLK--GMPVIKEMAKRTEEHLKGMVVPG--TLFEELGFNYIGPIDGHDVDA 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  +  ++N K  GP ++H++T+KGRGY  AEK    +H V KFDP+  K+  +     
Sbjct: 262 LVETMRNMRNLK--GPQVLHIMTKKGRGYEPAEKDPIGWHAVPKFDPSLFKKPATKPGLP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +++  F + L   AE D+ V+AI  AM  G+G+  F +RFP + FD  IAEQHAVT +AG
Sbjct: 320 TFSQVFGKWLCDIAEQDEKVLAITPAMREGSGMVEFSQRFPKQYFDAAIAEQHAVTLSAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
            ACEG KP  AIYS+F+QRAYDQ++HDV LQ+LPV FA+DR G+VGADGPTH G+FD++F
Sbjct: 380 FACEGFKPVVAIYSTFLQRAYDQLIHDVALQQLPVLFAIDRGGIVGADGPTHQGAFDLSF 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M C+PNMV+MAPSDE E   M+ T    D  PS  RYPRG   G         +P  +GK
Sbjct: 440 MRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGCATGATQVEAMTALP--IGK 497

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I   G+R+A+L +GT     L ASAL  +  L  TV D RF KPLD  L++ +A++HE
Sbjct: 498 GVIKRVGKRIAILNFGT-----LLASALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHE 552

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           VL+TVEE +I GG G+ V++ L +  +    ++   + LPD +I HGSP +      L  
Sbjct: 553 VLVTVEENAIMGGAGAGVLEQLQKLRMPKAVLQ---IGLPDEFIKHGSPEEVTHDLQLDA 609

Query: 539 SHIAATVFNILGQ 551
             I A +   L Q
Sbjct: 610 EGILAQINAYLAQ 622


>gi|158338290|ref|YP_001519467.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acaryochloris marina
           MBIC11017]
 gi|189027765|sp|B0C8J3.1|DXS_ACAM1 RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|158308531|gb|ABW30148.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acaryochloris marina
           MBIC11017]
          Length = 635

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/560 (46%), Positives = 355/560 (63%), Gaps = 30/560 (5%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+  R ES++D FG GH+STSIS+ LGMA+ RD KG     VAVIGDGAM
Sbjct: 88  HTLRQKDGVAGYLNRRESKFDHFGAGHASTSISSVLGMALARDAKGENFKTVAVIGDGAM 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPP-VGALSSALSRLQSNRP 119
           T G A EA+N+AG+L  + M+VILNDN          D  I P VGA+S  L++++ + P
Sbjct: 148 TGGMALEAINHAGHLPHTRMLVILNDN----------DMSISPNVGAMSRYLNKMRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHE-LAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDG 174
           ++ L +  +   KQ+  P  E +A  +     GM    +S  G+ +FEELG  YIGPVDG
Sbjct: 198 IQFLSDNFEEQLKQL--PFGEQVAPDLKRLKGGMKRLAVSKVGA-VFEELGFTYIGPVDG 254

Query: 175 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 234
           H++++L+A  +E    +  GPVL+HV T KG+GY  AE+    YH  + F+  TGK   S
Sbjct: 255 HSLEELLATFKEAHLHE--GPVLVHVATTKGKGYAIAEQDQVSYHAQSPFNLETGKAKPS 312

Query: 235 SA-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHA 293
           +  +  SY+  FAE LI  AE D  VV I AAM  GTGL+    + P +  DVGIAEQHA
Sbjct: 313 NKPKPPSYSKVFAETLIKMAENDIRVVGITAAMATGTGLDKLQAKLPKQYIDVGIAEQHA 372

Query: 294 VTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG 353
           VT AAG+ACEG++P  AIYS+F+QR YDQ++HDV +Q LPV F +DRAG+VGADGPTH G
Sbjct: 373 VTLAAGMACEGMRPVVAIYSTFLQRGYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQG 432

Query: 354 SFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI 413
            +D+ ++ CLPNMV+MAP DEAEL  M+ T     D P   RYPRG+G+GV L    +G 
Sbjct: 433 MYDIAYLRCLPNMVMMAPKDEAELQQMLVTGINYTDGPIAMRYPRGSGLGVGL--MEEGW 490

Query: 414 -PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
            PL +GK   L  G+ V LL YGT V      + +L  +G+R TV +ARF KPLD  LI 
Sbjct: 491 EPLPIGKAETLRHGDDVLLLAYGTMVNLASQVADMLTEHGVRATVVNARFAKPLDTELII 550

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA+    ++T+EEG + GGFGS V++ L    ++    +   + +PD+ ++H +P    
Sbjct: 551 PLAQKIGQVVTLEEGCLPGGFGSAVLEALMDHQVMAPVTR---IGVPDQLVEHATPDQSK 607

Query: 532 AQAGLTPSHIAATVFNILGQ 551
           A+ GLTP+ +A  V  +L Q
Sbjct: 608 AELGLTPAQVAERVLGLLKQ 627


>gi|421860462|ref|ZP_16292586.1| deoxyxylulose-5-phosphate synthase [Paenibacillus popilliae ATCC
           14706]
 gi|410829944|dbj|GAC43023.1| deoxyxylulose-5-phosphate synthase [Paenibacillus popilliae ATCC
           14706]
          Length = 632

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/552 (45%), Positives = 346/552 (62%), Gaps = 24/552 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL GF KR+ESE+D +  GHSSTS+SA +GMA+ RD KG  N V+AVIGDGA+T
Sbjct: 89  TLRQYKGLCGFVKRTESEHDVWEAGHSSTSLSAAMGMALSRDFKGESNKVIAVIGDGALT 148

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G A EA+N+ G+   +++V+LNDN+    P          VGAL + L +++S+R   +
Sbjct: 149 GGMALEALNHIGHEKKNLMVVLNDNEMSIAPN---------VGALHNYLCKIRSDRNYLK 199

Query: 123 LREVAKGVTKQI---GGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNVD 178
            +E  + + K+I   GG + + A +V D +   ++SG    LFEE GL Y GPV+GH++D
Sbjct: 200 AKEEVEQLLKKIPAIGGKIAKTAERVKDGFKYLVVSG---MLFEEFGLKYFGPVNGHDID 256

Query: 179 DLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSART 238
            L+ I ++   ++  GP LIHVVT KG+GY  AE  + K+HG++ +   +G+  K+    
Sbjct: 257 KLIDIFQQA--SRVNGPTLIHVVTRKGKGYTPAEADSHKWHGISPYKIESGQLLKAVGNP 314

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
             YT  F + L+  AE D  VVA+  AM GG+GL  F  RFP R  DVGIAEQHA T  A
Sbjct: 315 M-YTEVFGKTLMELAEQDDRVVAVTPAMPGGSGLLGFAERFPGRMIDVGIAEQHAATMCA 373

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
            LA EG+KP  A+YS+F+QRAYDQVVHD+  Q   V FA+DRAG VG DG TH G +D+ 
Sbjct: 374 ALAMEGMKPVLAVYSTFLQRAYDQVVHDICRQSANVIFAIDRAGFVGPDGETHQGVYDIA 433

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           FM  +PN+V+M P DE EL HM+ TA   D  P   RYPR NG+GVEL    + IP+ +G
Sbjct: 434 FMRHIPNIVLMMPKDENELRHMLKTAIEYDKGPIAVRYPRANGVGVELDA--ELIPIPIG 491

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
              ++  G+ VA+L  G  VQ    A+  L   G++L V +ARF KPLD A++  LA+  
Sbjct: 492 TWEVVCPGDHVAILAIGPMVQVAEEAAEHLRREGIQLRVINARFMKPLDEAMLTLLAREQ 551

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             LIT+EEGS+ GG GS V+++ AQ  +    V+ RP+ +PD +++HGS  +Q  + GLT
Sbjct: 552 LPLITLEEGSVAGGLGSAVMEYYAQHHVFG--VRVRPIGVPDCFVEHGSIKEQRQETGLT 609

Query: 538 PSHIAATVFNIL 549
              +   V  +L
Sbjct: 610 AEQLVKEVHMML 621


>gi|423097573|ref|ZP_17085369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q2-87]
 gi|397886218|gb|EJL02701.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q2-87]
          Length = 632

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/556 (45%), Positives = 350/556 (62%), Gaps = 30/556 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ  G++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKGGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPASAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGQWLCDMAAADPRLVGITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T    +  P+  RYPRG G    + P  +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLTTGHLFNG-PAAVRYPRGTGPNATIEPDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G++ ALL +G  +   L  +  L++     TV D RF KPLD AL+R +A  HE
Sbjct: 505 GVIRRQGKQTALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALLRGMADGHE 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTIEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDIYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV---FNILGQ 551
           + I A V     +LG+
Sbjct: 617 AGIEAAVRQRLQVLGR 632


>gi|428303915|ref|YP_007140740.1| 1-deoxy-D-xylulose-5-phosphate synthase [Crinalium epipsammum PCC
           9333]
 gi|428245450|gb|AFZ11230.1| 1-deoxy-D-xylulose-5-phosphate synthase [Crinalium epipsammum PCC
           9333]
          Length = 636

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/553 (45%), Positives = 356/553 (64%), Gaps = 25/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+  +L G     VAVIGDGA
Sbjct: 87  FHTIRQKDGVAGYLKRCESKFDHFGAGHASTSISAALGMALAGELNGENFKSVAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  + ++V+LNDN ++S+         P VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTKLLVVLNDN-EMSIS--------PNVGAIPRYLNKMRLSAP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGH 175
           ++ L++  +   K I      L  +++    GM    +   G+ +FEELG  Y+GPVDGH
Sbjct: 198 VQFLKDNLEEQFKHIPFVGDSLTPELERVKEGMKRLAVPKVGA-VFEELGFTYMGPVDGH 256

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSS 235
           N+++L+   ++      TGPVL+HVVT KG+GY  AE+    YH  + F+ ATGK   SS
Sbjct: 257 NLEELINTFKQAHTI--TGPVLVHVVTVKGKGYAIAEQDQVGYHAQSPFNLATGKPNPSS 314

Query: 236 ARTQSYTT-YFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
                  +  FAE LI  AE +  +VAI AAM  GTGL+ F  + P +  DVGIAEQHAV
Sbjct: 315 KPKPPSYSKVFAETLIKLAEENPKIVAITAAMATGTGLDKFQAKLPKQYIDVGIAEQHAV 374

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           T AAGLACEG++P  AIYS+F+QR +DQ++HDV +QKLPV F MDRAG+VGADGPTH G 
Sbjct: 375 TLAAGLACEGMRPLAAIYSTFLQRGFDQIIHDVCIQKLPVFFCMDRAGIVGADGPTHQGM 434

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGI 413
           +D+ ++ C+PN+V+MAP DEAEL  M+ T     D P   RYPRGNG GV L   G + +
Sbjct: 435 YDIAYLRCIPNIVLMAPKDEAELQQMLVTGIEYTDGPIALRYPRGNGYGVPLMEEGWETL 494

Query: 414 PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRS 473
           P  +GK  IL +G+ V +LGYG+ V   + A+ LL  +G+  TV +ARF KPLD  LI  
Sbjct: 495 P--IGKAEILRQGDDVLMLGYGSMVYPTMQAAELLSEHGIEATVVNARFAKPLDTELILP 552

Query: 474 LAKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLA 532
           LA+    ++T+EEG  IGGFGS + + L  + ++   V  + + +PD  +DH +P + + 
Sbjct: 553 LAQKIGKVVTLEEGCLIGGFGSAIAESLLDNNVV---VPLQRIGVPDILVDHATPEESIV 609

Query: 533 QAGLTPSHIAATV 545
             GLTP+ IAA +
Sbjct: 610 ALGLTPAQIAARI 622


>gi|170727813|ref|YP_001761839.1| 1-deoxy-D-xylulose-5-phosphate synthase [Shewanella woodyi ATCC
           51908]
 gi|229836081|sp|B1KQY8.1|DXS_SHEWM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|169813160|gb|ACA87744.1| deoxyxylulose-5-phosphate synthase [Shewanella woodyi ATCC 51908]
          Length = 621

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/551 (47%), Positives = 351/551 (63%), Gaps = 27/551 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ  G+  F  R ESEYD F  GHS TSISA L MAV  + +     VV+VIGDGA
Sbjct: 95  MHTIRQKGGIHPFPWREESEYDTFSVGHSGTSISAALAMAVAAEKEQAGRKVVSVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MT G  +EAMN+AG L +DM+V+LNDN ++S+           VGAL++ L++L S R  
Sbjct: 155 MTGGMVFEAMNHAGDLHNDMLVVLNDN-EMSISEN--------VGALNNHLAQLMSGRFY 205

Query: 121 RELREVAKGVTKQIGGP-MHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
             +RE +K V K  G P + E+A + +E+ +GM+     T+FEELG  YIGP+DGH+VD 
Sbjct: 206 TTIRESSKKVLK--GMPVIKEMAKRTEEHLKGMVVPG--TMFEELGFNYIGPIDGHDVDA 261

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           LV  +  ++N   +GP ++H++T+KGRGY  AEK    +H V KFDP+T ++  S     
Sbjct: 262 LVETMRNMRNL--SGPQILHIMTKKGRGYEPAEKDPIGWHAVPKFDPSTFEKPASKPSNP 319

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           +++  F + L   AE DK V+ I  AM  G+G+  F +RFP + FD  IAEQHAVT  AG
Sbjct: 320 TFSQVFGKWLCDVAEKDKKVLGITPAMREGSGMVEFSQRFPKQYFDAAIAEQHAVTLGAG 379

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
            ACEGLKP  AIYS+F+QR YDQ++HDV LQKLPV FA+DR G+VGADGPTH G+FD++F
Sbjct: 380 FACEGLKPVVAIYSTFLQRGYDQLIHDVALQKLPVLFAIDRGGIVGADGPTHQGAFDLSF 439

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           M  +PNMV+MAPSDE E   M+ T    +D P+  RYPRG+  G   P   +   L +GK
Sbjct: 440 MRTVPNMVIMAPSDENECRQMLYTGYCYNDGPTAVRYPRGSATGA--PQIEEMTALPIGK 497

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G++VA+L +GT + S L A   L++     TVAD RF KPLD  LI+ LA SH+
Sbjct: 498 GLIKRQGQKVAILNFGTLLASVLTAGESLDA-----TVADMRFVKPLDVELIKELANSHD 552

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           VL+TVEE +I GG GS V++ L Q   L   +    L LPD +I HG   + +A+  L  
Sbjct: 553 VLVTVEENAIMGGAGSGVLELLQQ---LKQPMPVLQLGLPDEFIKHGDSGEIIAELKLDA 609

Query: 539 SHIAATVFNIL 549
           + I   + + L
Sbjct: 610 AGILEQIESYL 620


>gi|422019659|ref|ZP_16366202.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia alcalifaciens
           Dmel2]
 gi|414102765|gb|EKT64355.1| 1-deoxy-D-xylulose-5-phosphate synthase [Providencia alcalifaciens
           Dmel2]
          Length = 621

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/536 (47%), Positives = 343/536 (63%), Gaps = 28/536 (5%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ +GL  F  R+ESEYD    GHSSTSISAGLGMA+  + + +    V VIGDGA+T
Sbjct: 97  TIRQKNGLHPFPWRAESEYDILSVGHSSTSISAGLGMAIAAEKEDKNRKTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG    DM+VILNDN ++S+           VGAL++ L+ L S +    
Sbjct: 157 AGMAFEAMNHAGDAAPDMLVILNDN-EMSISEN--------VGALNNHLAHLLSGKLYTT 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   I  P+ EL  K +E+ +GM+     T+FEELG  YIGPVDGH   D++A
Sbjct: 208 LREGGKKVFSNIP-PIKELLKKTEEHIKGMVVPG--TMFEELGFNYIGPVDGH---DVIA 261

Query: 183 ILEEVKNTKT-TGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSY 241
           +++ +KN +   GP  +H++T+KGRGY  AEK    +H V KFDPAT    KS     ++
Sbjct: 262 LIQTLKNMRELKGPQFLHIMTKKGRGYEPAEKDPISWHAVPKFDPATFTLPKSKDTRPTF 321

Query: 242 TTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLA 301
           +  F + L  EA+ D  ++A+  AM  G+G+  F + +P + FDV IAEQHAVTFAAGLA
Sbjct: 322 SKIFGDWLCEEAKDDDKLMAVTPAMREGSGMVRFSKEYPDQYFDVAIAEQHAVTFAAGLA 381

Query: 302 CEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMA 361
             G  P  AIYS+F+QR YDQV+HDV +QKLPV FA+DRAG+VGADG TH GSFD++F+ 
Sbjct: 382 IGGYNPIVAIYSTFLQRGYDQVIHDVAIQKLPVMFAIDRAGIVGADGQTHQGSFDISFLR 441

Query: 362 CLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGR 421
           C+P MV+M PSDE E   M+ T     + P+  RYPRG G G EL P     PLE+GKG 
Sbjct: 442 CIPTMVIMTPSDENECRQMLHTGYHYQEGPTAVRYPRGAGTGAELMP---LAPLEIGKGI 498

Query: 422 ILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVL 481
           +  +GE+VA+L +GT + + L A+  + +     TV D RF KPLD ALI  +A SH++L
Sbjct: 499 VRRQGEKVAILSFGTLLSNALEAAEQINA-----TVVDMRFVKPLDEALILEMANSHDML 553

Query: 482 ITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGL 536
           +T+EE +I GG GS V +FL ++  +   +    L LPD +I  G+  + LA  GL
Sbjct: 554 VTLEENAIMGGAGSGVNEFLMKEKKVLPVLN---LGLPDFFIPQGTQDELLADLGL 606


>gi|261380775|ref|ZP_05985348.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
 gi|284796238|gb|EFC51585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Neisseria subflava NJ9703]
          Length = 629

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/555 (46%), Positives = 350/555 (63%), Gaps = 33/555 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ  GL+GF KRSESEYD FG GHSSTSI A LGMAV     G     VA+IGDGA
Sbjct: 91  MHTMRQYGGLAGFPKRSESEYDAFGVGHSSTSIGAALGMAVADKQLGNNRRSVAIIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EA+N AG +D D++VILNDN+    P     G +P    L+S + R   +  L
Sbjct: 151 MTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNV---GALPKY--LASNVVR-DMHGLL 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMI-----SGSGSTLFEELGLYYIGPVDGH 175
             ++  +  V  ++ G M ELA KV+   + +      +    +LFE  G  Y GPVDGH
Sbjct: 205 STIKAQSSKVLDKLPGAM-ELAQKVENKIKTLAGEAEHAKQSLSLFENFGFRYTGPVDGH 263

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKF-DPATGKQFKS 234
           NV++LV +L++++  K  GP L+HV+T+KG GY +AE    KYH V+K        + K 
Sbjct: 264 NVENLVDVLKDLRGRK--GPQLLHVITKKGNGYKFAENDPVKYHAVSKLPSEVPAPEVKP 321

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           +A   +YT  F + L  +A  D+ +VAI  AM  G+GL  F +RFP R FDVGIAEQHAV
Sbjct: 322 AAAKPTYTQVFGQWLCDQAAADERLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAV 381

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFA GLACEG+KP  AIYS+F+QRAYDQ+VHDV LQ LPV FA+DRAG+VGADGPTH G 
Sbjct: 382 TFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAIDRAGIVGADGPTHAGL 441

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D++F+ C+PNM++ APSDE E   +++T    +  PS  RYPRG G G  +  G + + 
Sbjct: 442 YDLSFLRCVPNMIIAAPSDENECRLLLSTCYQANS-PSAVRYPRGTGTGATVSDGLETV- 499

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
            E+GKG I  EGE++A++ +G+ V     A +L  ++ L  TVAD RF KP+D  LI  L
Sbjct: 500 -EIGKGIIRREGEKIAIIAFGSMV-----APSLTAADKLNATVADMRFVKPIDEELIVRL 553

Query: 475 AKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQ 530
           A+SH+ ++T EE +  GG GS V++ LA+ G+       +P++L    D+  +HG P   
Sbjct: 554 ARSHDYIVTAEENAEQGGAGSAVLEVLAKHGIC------KPVLLLGVEDKVTEHGDPKKL 607

Query: 531 LAQAGLTPSHIAATV 545
           L   GL+   I   +
Sbjct: 608 LDDLGLSAEAIEKRI 622


>gi|307260666|ref|ZP_07542358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306869743|gb|EFN01528.1| 1-deoxy-D-xylulose-5-phosphate synthase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 639

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/558 (46%), Positives = 347/558 (62%), Gaps = 36/558 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+RQ +G+  F  R ES YD    GHSSTSISAG+G+AV  + +      V VIGDGA
Sbjct: 92  MHTIRQKNGIHPFPWREESLYDVLSVGHSSTSISAGVGIAVAAEKENAGRKTVCVIGDGA 151

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG L +DM+VILNDN ++S+           VGAL++ L+R+ S    
Sbjct: 152 ITAGMAFEAMNHAGALHTDMLVILNDN-EMSISEN--------VGALNNHLARIFSGSIY 202

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +R+ +K V  ++   +     K +E+ +G+IS   STLFEELG  YIGP+DGHN+D+L
Sbjct: 203 TTVRDGSKKVLDKVP-TIKNFMKKSEEHMKGVISPE-STLFEELGFNYIGPIDGHNIDEL 260

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L  ++  K  GP  +H+ T+KG+GY  AE     YHGV KFDP  G Q   S    +
Sbjct: 261 VKTLSNMRELK--GPQFLHIRTKKGKGYEPAENDPIGYHGVPKFDPTCG-QLPKSKTIPT 317

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F   L   AE D  ++ I  AM  G+G+  F +RFP + FDV IAEQHAVTF AGL
Sbjct: 318 YSDIFGNWLCEMAEQDSKLIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGL 377

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYSSF+QRAYDQ++HDV +Q LPV FA+DRAG+VGADG TH G+FDV+FM
Sbjct: 378 AIAGYKPVVAIYSSFLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDVSFM 437

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNM +M PSDE E+  M+ TA  + + P+  RYPRGN  GV L P      LEVGKG
Sbjct: 438 RCIPNMTIMCPSDENEMRQMLYTAYRM-NTPTAVRYPRGNAQGVALAPMQA---LEVGKG 493

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           +++ +G++VA+L +G      L   A + +     T+AD RF KPLD  L+  LA SHE+
Sbjct: 494 KLIQQGQKVAILNFGP-----LLNEARIVAEKHNYTLADMRFVKPLDEQLVAELADSHEL 548

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQLAQAGL 536
           L+T+EE +I GG GS V ++L + G      K RPLV+   PD ++   + A+  A  GL
Sbjct: 549 LVTLEENAIQGGAGSAVNEYLQKIG------KIRPLVMLGIPDFFVPQATQAESYADLGL 602

Query: 537 TPSHIA---ATVFNILGQ 551
             + I      V N  GQ
Sbjct: 603 DAAGIEQRIQAVVNTAGQ 620


>gi|254446977|ref|ZP_05060444.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           HTCC5015]
 gi|198263116|gb|EDY87394.1| 1-deoxy-D-xylulose-5-phosphate synthase [gamma proteobacterium
           HTCC5015]
          Length = 633

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/551 (45%), Positives = 342/551 (62%), Gaps = 26/551 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+R+ DGL+ F KR ESEYD FG GHSSTSISA LGMA+   L G     VA+IGDGAMT
Sbjct: 98  TIRKKDGLTPFPKRKESEYDTFGVGHSSTSISAALGMAMAARLNGEDRKAVAIIGDGAMT 157

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EA+NNAG L+++M+VILNDN ++S+         P VGAL+   ++L S R    
Sbjct: 158 AGMAFEALNNAGDLNANMLVILNDN-EMSIS--------PNVGALNKYFTKLLSGRFYST 208

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           +RE  K     +   + ELA + +E+ +GM++    TLFE  G  Y GPVDGH+V+ +  
Sbjct: 209 VRESGKKALSPMP-QLKELARRTEEHVKGMLTPG--TLFEAFGFQYFGPVDGHDVETMSD 265

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
           +L+ +K+ K  GP L+HVVT+KG+GY  AE    KYHGV +FDPA G Q   +    +YT
Sbjct: 266 VLDNIKDIK--GPCLLHVVTKKGKGYDKAEADQVKYHGVGQFDPAEGIQPSGAPSAPTYT 323

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  +  +  I  AM  G+GL  F ++FP R FDVGIAEQHAVT AAGLAC
Sbjct: 324 QVFGQWLCDMAAAEPKLAGITPAMREGSGLVDFEKQFPERYFDVGIAEQHAVTLAAGLAC 383

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
           +G+KP  AIYS+F+QRAYDQ +HDVD+Q L V FA+DRAGLVG DGPTH GSFD +F+ C
Sbjct: 384 DGIKPVVAIYSTFLQRAYDQAIHDVDIQNLDVLFAIDRAGLVGPDGPTHAGSFDYSFLRC 443

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           LPN +VMAP+DE E   M++T       P+  RYPRG G GV +    + +P  +G+  +
Sbjct: 444 LPNTLVMAPADENECRKMLSTGLQ-HKGPAAVRYPRGKGPGVAVENTLETLP--IGQSEL 500

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
             EG  +A+LG+G  +  C        +  L  ++ + RF  PLD   +  +A++H+++I
Sbjct: 501 RREGSGIAILGFGAVLADCETV-----AQNLGASLVNMRFVSPLDEQRLIEMAETHDLII 555

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE  I GG GS V +F    G+    +    + LP+RYI+HG   + L  AGL  + I
Sbjct: 556 TVEENVIAGGAGSAVNEFYNSRGVRAPVLN---IGLPNRYIEHGQREEMLTDAGLDAAGI 612

Query: 542 AATVFNILGQT 552
              +   L Q 
Sbjct: 613 ETQIREWLKQN 623


>gi|296101541|ref|YP_003611687.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295056000|gb|ADF60738.1| 1-deoxy-D-xylulose-5-phosphate synthase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 620

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/548 (47%), Positives = 346/548 (63%), Gaps = 26/548 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + + ++   V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKENKQRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIKPDMLVILNDN-EMSISEN--------VGALNNHLAQLLSGKLYST 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  LV 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLVT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP +G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPTSGCLPKSSGGMPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F +++P + FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSKKYPDQYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++F+ C
Sbjct: 383 GGYKPVVAIYSTFLQRAYDQVIHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSFLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P+MV+M PSDE E   M+ T     D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPDMVIMTPSDENECRQMLYTGYHYQDGPSAVRYPRGNAVGVELQPLEK---LAIGKGLV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE+VA+L +GT     L   A   +  L  T+ D RF KPLD +LI  +A++HEVL+
Sbjct: 500 KRRGEKVAILSFGT-----LMPEAAKVAEALNATLVDMRFVKPLDESLILEMAETHEVLV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           T+EE +I GG GS V + L  +      V    L LPD +I  G+  +  A  GL  + I
Sbjct: 555 TLEENAIMGGAGSGVNEVLMAN---RKAVPVLNLGLPDHFIPQGTQDEARAAIGLDAAGI 611

Query: 542 AATVFNIL 549
            A + + L
Sbjct: 612 EAKIRSWL 619


>gi|414078571|ref|YP_006997889.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena sp. 90]
 gi|413971987|gb|AFW96076.1| 1-deoxy-D-xylulose-5-phosphate synthase [Anabaena sp. 90]
          Length = 635

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/561 (45%), Positives = 356/561 (63%), Gaps = 25/561 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ DG++G+ KR E+++D FG GH+STSISA LGMA+ RDLKG K   VAVIGDGA+T
Sbjct: 89  TLRQKDGVAGYLKRGENKFDHFGAGHASTSISAALGMALARDLKGEKFKTVAVIGDGALT 148

Query: 63  AGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLR 121
            G A EA+N+AG+L  ++++V+LNDN ++S+         P VGA+   L++++ + P++
Sbjct: 149 GGMALEAINHAGHLPKTNLLVVLNDN-EMSIS--------PNVGAIPRYLNKMRLSAPVQ 199

Query: 122 ELREVAKGVTKQIGGPMHELAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDGHNV 177
            L +  +   K +      L+ +++    GM    +   G+ +FEELG  Y+GPVDGHN+
Sbjct: 200 FLSDGIEEQLKHLPFVGESLSPELERIKEGMKRLAVPKVGA-VFEELGFTYMGPVDGHNL 258

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA- 236
           ++L+A  ++    + TGPVL+HVVT KG+GY  AEK    YH    F+  TGK   S+  
Sbjct: 259 EELIATFQQAH--QITGPVLVHVVTTKGKGYELAEKDQVGYHAQTPFNLTTGKAIPSNKP 316

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
           +  +Y   F+  L+  A  +  +V I AAM  GTGL+    + P +  DVGIAEQHA+T 
Sbjct: 317 KPPAYAKVFSHTLVTLAAQNPKIVGITAAMATGTGLDKLQAKLPNQYIDVGIAEQHAITL 376

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           AAGLACEG++P  AIYS+F+QRA+DQ++HDV +Q LPV F +DRAG+VGADGPTH G +D
Sbjct: 377 AAGLACEGMRPVAAIYSTFLQRAFDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMYD 436

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PL 415
           + ++  +PNMVVMAP DEAEL  MV T     D P   R+PRGNG GV  P   +G   L
Sbjct: 437 IAYLRFIPNMVVMAPKDEAELQRMVVTGINYTDGPISMRFPRGNGHGV--PLMEEGWESL 494

Query: 416 EVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLA 475
           E+GKG IL +G+ V ++GYGT V   + A+ +L  +G+  TV +ARF KPLD  LI  LA
Sbjct: 495 EIGKGEILRQGDDVLIVGYGTMVYPAMQAAEILSEHGIEATVINARFVKPLDTELILPLA 554

Query: 476 KSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQA 534
           K    ++T+EEG + GGFGS V + L      D  V  + + +PD  +DH +P    A+ 
Sbjct: 555 KHIGRVVTLEEGCLMGGFGSAVAEALLDA---DIVVPVKRIGVPDILVDHATPDQSFAEL 611

Query: 535 GLTPSHIAATVFNILGQTREA 555
           GL+   IA TV     + + A
Sbjct: 612 GLSSPQIAETVLQAFFKKQAA 632


>gi|407368404|ref|ZP_11114936.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas mandelii JR-1]
          Length = 632

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/548 (46%), Positives = 348/548 (63%), Gaps = 29/548 (5%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+      +AVIGDGA
Sbjct: 102 MGTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  ++++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVNANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDP--ATGKQFKSSART 238
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P  A     K S   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEIDPIGYHAITKLEPVDAPAAAPKKSGGP 327

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
           + Y+  F E L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AA
Sbjct: 328 K-YSGVFGEWLCDMAASDPRLVGITPAMKEGSDLVAFSERFPLRYFDVAIAEQHAVTLAA 386

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           G+ACEG KP  AIYS+F+QR YDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++
Sbjct: 387 GMACEGAKPVVAIYSTFLQRGYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLS 446

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVG 418
           F+ C+P M+VM PSDE EL  M+ T    +  P+  RYPRG G    +    +  P+E+G
Sbjct: 447 FLRCIPGMLVMTPSDENELRKMLTTGHLFNG-PAAVRYPRGTGPNATIEKDLQ--PIEIG 503

Query: 419 KGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSH 478
           KG +  +G +VALL +G  +   L  +  L++     TV D RF KPLD  L+R +A SH
Sbjct: 504 KGVVRRQGSKVALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEDLVRDIAGSH 558

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
           E+L+T+EE +I GG G  V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL 
Sbjct: 559 ELLVTIEENAIMGGAGGAVSEFLARENILKSMLH---LGLPDSYVEHAKPAQMLAECGLD 615

Query: 538 PSHIAATV 545
            + I A+V
Sbjct: 616 EAGIEASV 623


>gi|118595180|ref|ZP_01552527.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophilales bacterium
           HTCC2181]
 gi|118440958|gb|EAV47585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Methylophilales bacterium
           HTCC2181]
          Length = 613

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/550 (44%), Positives = 354/550 (64%), Gaps = 27/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHT+R+ +GLSGF +RSES YD FGTGHSSTSISA LGMA     +  KN  +A+IGDGA
Sbjct: 88  MHTLRRKNGLSGFPRRSESMYDEFGTGHSSTSISAALGMAEALRKRKSKNKAIAIIGDGA 147

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+E +N++G  D++++VILNDN  +S+           VGAL++ L++L S R  
Sbjct: 148 MTAGMAFEGLNHSGSTDNNILVILNDN-DMSISKN--------VGALNNYLAKLLSGRVY 198

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             L+   K V  ++  P+ ELA K +E+ +GM+     TLFEE G  YIGP+DGH++D L
Sbjct: 199 DGLKRSGKAVFSKVP-PILELARKTEEHMKGMVIPG--TLFEEFGFNYIGPIDGHDLDVL 255

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +  LE +K  K  GP  +HV T+KG GY  A+   +K+HGV KF+P  G   K S ++ +
Sbjct: 256 IDTLENIK--KIDGPQFLHVATKKGFGYAPAQDDPNKFHGVGKFNPEDGLS-KDSNKSLT 312

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           YT  F+  L+  A+ +  + AI  AM  G+GLN F +++P+R +DVGIAEQHA+TFAAGL
Sbjct: 313 YTQVFSLWLMDAAKKNMHLCAITPAMSDGSGLNAFAKKYPSRYYDVGIAEQHALTFAAGL 372

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+FMQRAYDQ++HD+ +Q +P+ FA+DRAGLVGADG TH G+FD++FM
Sbjct: 373 ALSGNKPVVAIYSTFMQRAYDQLIHDIAIQNIPMLFAIDRAGLVGADGATHSGNFDISFM 432

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+++MAPS+E+E FHM++     +      RYPRGN  G  +   N   P+ +G  
Sbjct: 433 RCIPNLILMAPSNESECFHMLSFGYKYNG-VCAVRYPRGNSPGSSIELLND--PIRIGCA 489

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
             +  G++VA+L +G  ++ C   +  + +     ++ D RF KP+D  +I+ + K HE+
Sbjct: 490 NKVRTGKKVAILAFGPIIEVCREVAEEINA-----SLIDMRFIKPIDKKMIKQVCKDHEL 544

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           +++VEE +I GG GS V++ +++  LL  T+    L +PD++ +H S  + L   GL   
Sbjct: 545 IVSVEENAITGGAGSSVLEVISESNLLTKTL---VLGIPDQFFEHASQQEVLKACGLDKQ 601

Query: 540 HIAATVFNIL 549
            I   +   L
Sbjct: 602 SIKRKIVKQL 611


>gi|432859076|ref|ZP_20085250.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE146]
 gi|431408131|gb|ELG91323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE146]
          Length = 620

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/548 (47%), Positives = 345/548 (62%), Gaps = 26/548 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAQ---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGM 611

Query: 542 AATVFNIL 549
            A + + L
Sbjct: 612 EAKIKSWL 619


>gi|399522390|ref|ZP_10763054.1| dxs [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399109824|emb|CCH39615.1| dxs [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 631

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/546 (46%), Positives = 341/546 (62%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M ++RQ  GL+ F +RSESEYD FG GHSSTSISA LGMA+   LKG K   VAVIGDGA
Sbjct: 102 MGSLRQKHGLAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLKGEKRKSVAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHATDVGANMLVILNDN-DMSISKN--------VGGLSNYLAKIISSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K +  ++ G   E+A KV+E+A+GM+     TLFEELG  Y+GP+DGH++  L
Sbjct: 213 ASMREGSKKILSRLPGAW-EIARKVEEHAKGMLVPG--TLFEELGWNYVGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +++    GP  +HVVT+KG+G+  AE     YH + K +P              
Sbjct: 270 LATLRNMRDLD--GPQFLHVVTKKGKGFAPAEADPIGYHAITKLEPVPPVAAPKQPSGPK 327

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG+
Sbjct: 328 YSNVFGQWLCDMAAADNRLVGITPAMKEGSDLVAFSERFPERYFDVAIAEQHAVTLAAGM 387

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++++
Sbjct: 388 ACEGAKPVVAIYSTFLQRAYDQLIHDVAVQHLDVLFAIDRAGLVGEDGPTHAGSFDLSYL 447

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+P M+VM PSDE EL  M+ T    D  P+  RYPRG G    L  G +  PLE+GK 
Sbjct: 448 RCIPGMLVMTPSDENELRRMLTTGHLFDG-PAAVRYPRGTGPNAPLDAGLE--PLEIGKA 504

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            +  +G+ VALL +G  +   L     L++     TV D RF KPLD AL+R LA SHE+
Sbjct: 505 VVRRQGKGVALLAFGVQLAEALRVGETLDA-----TVVDMRFVKPLDEALLRELAGSHEL 559

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE SI GG GS V +F A + +    +    L LPD Y++H  P+  LA+ GL  +
Sbjct: 560 LVTIEENSIMGGAGSAVSEFFAAENI---QLPMLHLGLPDYYVEHAKPSQMLAECGLDEA 616

Query: 540 HIAATV 545
            I   V
Sbjct: 617 GIERAV 622


>gi|423699565|ref|ZP_17674055.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q8r1-96]
 gi|387996687|gb|EIK58017.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas fluorescens
           Q8r1-96]
          Length = 632

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/547 (46%), Positives = 346/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+  +   +AVIGDGA
Sbjct: 102 MGTLRQKDGIAAFPRRSESEYDTFGVGHSSTSISAALGMAIAARLQNSERKAIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  +D++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVDANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 ASMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPA-TGKQFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P          A   
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLDAPAAAPKKAGGP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + L   A  D  +V I  AM  G+ L  F  R+P R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGQWLCDMAAADPRLVGITPAMKEGSDLVAFSERYPQRYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QRAYDQ++HDV +Q L V FA+DRAGLVG DGPTH GSFD++F
Sbjct: 388 MACEGAKPVVAIYSTFLQRAYDQLIHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSF 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P M+VM PSDE EL  M+ T    +  P+  RYPRG G    +    +  P+E+GK
Sbjct: 448 LRCIPGMLVMTPSDENELRKMLTTGHLFNG-PAAVRYPRGTGPNATISTDLE--PIEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G I  +G+  ALL +G  +   L  +  L++     TV D RF KPLD AL+R +A SH+
Sbjct: 505 GVIRRQGKHTALLVFGVQLAEALKVAETLDA-----TVVDMRFVKPLDEALVREMAGSHD 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE +I GG G+ V +FLA++ +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTLEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDSYVEHAKPAQMLAECGLDE 616

Query: 539 SHIAATV 545
             I A V
Sbjct: 617 VGIEAAV 623


>gi|359461735|ref|ZP_09250298.1| 1-deoxy-D-xylulose-5-phosphate synthase [Acaryochloris sp. CCMEE
           5410]
          Length = 635

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/560 (46%), Positives = 355/560 (63%), Gaps = 30/560 (5%)

Query: 2   HTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAM 61
           HT+RQ DG++G+  R ES++D FG GH+STSIS+ LGMA+ RD KG     VAVIGDGAM
Sbjct: 88  HTLRQKDGVAGYLNRRESKFDHFGAGHASTSISSVLGMALARDAKGENFKTVAVIGDGAM 147

Query: 62  TAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPP-VGALSSALSRLQSNRP 119
           T G A EA+N+AG+L  + M+VILNDN          D  I P VGA+S  L++++ + P
Sbjct: 148 TGGMALEAINHAGHLPHTRMLVILNDN----------DMSISPNVGAMSRYLNKMRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHE-LAAKVDEYARGM----ISGSGSTLFEELGLYYIGPVDG 174
           ++ L +  +   KQ+  P  E +A  +     GM    +S  G+ +FEELG  Y+GPVDG
Sbjct: 198 IQFLSDNFEEQLKQL--PFGEQVAPDLKRLKGGMKRLAVSKVGA-VFEELGFTYMGPVDG 254

Query: 175 HNVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKS 234
           H++++L+A  +E    +  GPVL+HV T KG+GY  AE+    YH  + F+  TGK   S
Sbjct: 255 HSLEELLATFKEAHLHE--GPVLVHVATTKGKGYAIAEQDQVSYHAQSPFNLETGKAKPS 312

Query: 235 SA-RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHA 293
           +  +  SY+  FAE LI  AE D  VV I AAM  GTGL+    + P +  DVGIAEQHA
Sbjct: 313 NKPKPPSYSKVFAETLIKMAENDIRVVGITAAMATGTGLDKLQAKLPKQYIDVGIAEQHA 372

Query: 294 VTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCG 353
           VT AAG+ACEG++P  AIYS+F+QR YDQ++HDV +Q LPV F +DRAG+VGADGPTH G
Sbjct: 373 VTLAAGMACEGMRPVVAIYSTFLQRGYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQG 432

Query: 354 SFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI 413
            +D+ ++ CLPNMV+MAP DEAEL  M+ T     D P   RYPRG+G+GV L    +G 
Sbjct: 433 MYDIAYLRCLPNMVMMAPKDEAELQQMLVTGINYTDGPIAMRYPRGSGLGVGL--MEEGW 490

Query: 414 -PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIR 472
            PL +GK   L  G+ V LL YGT V      + +L  +G+R TV +ARF KPLD  LI 
Sbjct: 491 EPLPIGKAETLRHGDDVLLLAYGTMVNLASQVADMLTEHGVRATVVNARFAKPLDTELII 550

Query: 473 SLAKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQL 531
            LA+    ++T+EEG + GGFGS V++ L    +L    +   + +PD+ ++H +P    
Sbjct: 551 PLAQKIGQVVTLEEGCLPGGFGSAVLEALMDHQVLAPVTR---IGVPDQLVEHATPDQSK 607

Query: 532 AQAGLTPSHIAATVFNILGQ 551
           A+ GLTP+ +A  V  +L Q
Sbjct: 608 AELGLTPAQVAERVLGLLKQ 627


>gi|16128405|ref|NP_414954.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Escherichia coli str. K-12 substr.
           MG1655]
 gi|170080006|ref|YP_001729326.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli str. K-12
           substr. DH10B]
 gi|238899708|ref|YP_002925504.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli BW2952]
 gi|300947929|ref|ZP_07162077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 116-1]
 gi|300957985|ref|ZP_07170150.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 175-1]
 gi|301025693|ref|ZP_07189209.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 196-1]
 gi|301647343|ref|ZP_07247155.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 146-1]
 gi|331640937|ref|ZP_08342072.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H736]
 gi|386279446|ref|ZP_10057127.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia sp. 4_1_40B]
 gi|386596704|ref|YP_006093104.1| deoxyxylulose-5-phosphate synthase [Escherichia coli DH1]
 gi|386703637|ref|YP_006167484.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli P12b]
 gi|387610946|ref|YP_006114062.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli ETEC
           H10407]
 gi|387620179|ref|YP_006127806.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DH1]
 gi|388476526|ref|YP_488712.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Escherichia coli str. K-12 substr. W3110]
 gi|404373742|ref|ZP_10978977.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia sp. 1_1_43]
 gi|415777160|ref|ZP_11488412.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 3431]
 gi|417270582|ref|ZP_12057935.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 2.4168]
 gi|417275496|ref|ZP_12062833.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 3.2303]
 gi|417293089|ref|ZP_12080369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B41]
 gi|417611452|ref|ZP_12261926.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli
           STEC_EH250]
 gi|417616808|ref|ZP_12267242.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli G58-1]
 gi|417632904|ref|ZP_12283125.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli
           STEC_S1191]
 gi|417945762|ref|ZP_12588991.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli XH140A]
 gi|417976608|ref|ZP_12617400.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli XH001]
 gi|418959287|ref|ZP_13511186.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli J53]
 gi|419140950|ref|ZP_13685707.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6A]
 gi|419146790|ref|ZP_13691486.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6B]
 gi|419157759|ref|ZP_13702285.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6D]
 gi|419162692|ref|ZP_13707172.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6E]
 gi|419811837|ref|ZP_14336709.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O32:H37
           str. P4]
 gi|422764950|ref|ZP_16818677.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E1520]
 gi|422769648|ref|ZP_16823339.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E482]
 gi|422816434|ref|ZP_16864649.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M919]
 gi|423701201|ref|ZP_17675660.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H730]
 gi|425113747|ref|ZP_18515585.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 8.0566]
 gi|425118513|ref|ZP_18520248.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 8.0569]
 gi|425271115|ref|ZP_18662629.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TW15901]
 gi|425281787|ref|ZP_18672908.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TW00353]
 gi|432415372|ref|ZP_19658003.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE44]
 gi|432562330|ref|ZP_19798957.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE51]
 gi|432579097|ref|ZP_19815531.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE56]
 gi|432626004|ref|ZP_19861989.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE77]
 gi|432635734|ref|ZP_19871620.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE81]
 gi|432659662|ref|ZP_19895323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE111]
 gi|432684253|ref|ZP_19919572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE156]
 gi|432690310|ref|ZP_19925556.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE161]
 gi|432702992|ref|ZP_19938118.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE171]
 gi|432735946|ref|ZP_19970722.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE42]
 gi|432953553|ref|ZP_20145852.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE197]
 gi|433046491|ref|ZP_20233923.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE120]
 gi|442590098|ref|ZP_21008882.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli
           O10:K5(L):H4 str. ATCC 23506]
 gi|450239635|ref|ZP_21899062.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli S17]
 gi|2501357|sp|P77488.3|DXS_ECOLI RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|229813440|sp|B1XF08.1|DXS_ECODH RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|259645381|sp|C4ZTH7.1|DXS_ECOBW RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|1773104|gb|AAB40176.1| similar to H. influenzae HI1439 [Escherichia coli]
 gi|1786622|gb|AAC73523.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Escherichia coli str. K-12 substr.
           MG1655]
 gi|2665586|gb|AAC46162.1| D-1-deoxyxylulose 5-phosphate synthase [Escherichia coli]
 gi|85674560|dbj|BAE76200.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Escherichia coli str. K12 substr. W3110]
 gi|169887841|gb|ACB01548.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Escherichia coli str. K-12 substr. DH10B]
 gi|238859739|gb|ACR61737.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Escherichia coli BW2952]
 gi|260450393|gb|ACX40815.1| deoxyxylulose-5-phosphate synthase [Escherichia coli DH1]
 gi|299880005|gb|EFI88216.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 196-1]
 gi|300315321|gb|EFJ65105.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 175-1]
 gi|300452529|gb|EFK16149.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 116-1]
 gi|301074488|gb|EFK89294.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 146-1]
 gi|309700682|emb|CBI99978.1| 1-deoxyxylulose-5-phosphate synthase [Escherichia coli ETEC H10407]
 gi|315135102|dbj|BAJ42261.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DH1]
 gi|315616640|gb|EFU97257.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 3431]
 gi|323938605|gb|EGB34854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E1520]
 gi|323943226|gb|EGB39382.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli E482]
 gi|331037735|gb|EGI09955.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H736]
 gi|342362494|gb|EGU26612.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli XH140A]
 gi|344193775|gb|EGV47853.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli XH001]
 gi|345365937|gb|EGW98035.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli
           STEC_EH250]
 gi|345381180|gb|EGX13065.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli G58-1]
 gi|345391214|gb|EGX21008.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli
           STEC_S1191]
 gi|359331180|dbj|BAL37627.1| 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring,
           FAD-requiring [Escherichia coli str. K-12 substr. MDS42]
 gi|378000283|gb|EHV63357.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6A]
 gi|378001718|gb|EHV64777.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6B]
 gi|378014233|gb|EHV77139.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6D]
 gi|378017158|gb|EHV80033.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli DEC6E]
 gi|383101805|gb|AFG39314.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli P12b]
 gi|384377989|gb|EIE35881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli J53]
 gi|385155320|gb|EIF17324.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O32:H37
           str. P4]
 gi|385539907|gb|EIF86734.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M919]
 gi|385712891|gb|EIG49830.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli H730]
 gi|386123445|gb|EIG72041.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia sp. 4_1_40B]
 gi|386236925|gb|EII68897.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 2.4168]
 gi|386242149|gb|EII79062.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 3.2303]
 gi|386252661|gb|EIJ02352.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli B41]
 gi|404292781|gb|EJZ49572.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia sp. 1_1_43]
 gi|408198891|gb|EKI24102.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TW15901]
 gi|408206207|gb|EKI31019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli TW00353]
 gi|408573138|gb|EKK48997.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 8.0566]
 gi|408573651|gb|EKK49481.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 8.0569]
 gi|430943748|gb|ELC63854.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE44]
 gi|431099563|gb|ELE04583.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE51]
 gi|431108799|gb|ELE12770.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE56]
 gi|431165139|gb|ELE65497.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE77]
 gi|431174016|gb|ELE74077.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE81]
 gi|431203779|gb|ELF02369.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE111]
 gi|431225224|gb|ELF22429.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE156]
 gi|431230798|gb|ELF26568.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE161]
 gi|431247123|gb|ELF41365.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE171]
 gi|431286834|gb|ELF77654.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE42]
 gi|431470683|gb|ELH50580.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE197]
 gi|431572880|gb|ELI45704.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE120]
 gi|441609756|emb|CCP94795.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli
           O10:K5(L):H4 str. ATCC 23506]
 gi|449324948|gb|EMD14867.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli S17]
          Length = 620

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/544 (47%), Positives = 343/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVILNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|432748873|ref|ZP_19983496.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE29]
 gi|433090741|ref|ZP_20277049.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE138]
 gi|431300611|gb|ELF90162.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE29]
 gi|431615193|gb|ELI84323.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE138]
          Length = 620

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/548 (47%), Positives = 344/548 (62%), Gaps = 26/548 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGM 611

Query: 542 AATVFNIL 549
            A +   L
Sbjct: 612 EAKIMAWL 619


>gi|331645593|ref|ZP_08346697.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M605]
 gi|417660996|ref|ZP_12310577.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli AA86]
 gi|330910214|gb|EGH38724.1| 1-deoxy-D-xylulose 5-phosphate synthase [Escherichia coli AA86]
 gi|331045755|gb|EGI17881.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M605]
          Length = 620

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/544 (47%), Positives = 343/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVTIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDATGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|451970637|ref|ZP_21923862.1| 1-deoxyxylulose-5-phosphate synthase [Vibrio alginolyticus E0666]
 gi|451933365|gb|EMD81034.1| 1-deoxyxylulose-5-phosphate synthase [Vibrio alginolyticus E0666]
          Length = 621

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/552 (46%), Positives = 351/552 (63%), Gaps = 26/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DGL  F  R ESEYD    GHSSTSISAGLGMA+    +G+   +V+VIGDGA
Sbjct: 95  MPTIRQKDGLHPFPWREESEYDTLSVGHSSTSISAGLGMAISAQKEGKGRKIVSVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG +  DM+VILNDN ++S+           VGAL++ L+++ S    
Sbjct: 155 ITAGMAFEAMNHAGDVHPDMLVILNDN-EMSISEN--------VGALNNHLAKVLSGSLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE  K V   +  P+ EL  + +E+ +GM+     TLFEE G  YIGP+DGH+V++L
Sbjct: 206 TSIREGGKKVLSGVP-PIKELVRRTEEHLKGMVVPG--TLFEEFGFNYIGPIDGHDVNEL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           V  L+ ++  K  GP  +H++T+KG+GY  AEK    YHGV KFDP      KSS    +
Sbjct: 263 VKTLKNMRELK--GPQFLHIMTKKGKGYEPAEKDPIGYHGVPKFDPTHNCLPKSSGGKPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F + L   A  D  ++AI  AM  G+G+  F + +P + FDV IAEQHAVT A G+
Sbjct: 321 YSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPDQYFDVAIAEQHAVTLATGM 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G  P  AIYS+F+QR YDQ++HD+ +  LPV FA+DRAGLVGADG TH G+FD++FM
Sbjct: 381 AIAGDHPIVAIYSTFLQRGYDQLIHDIAIMDLPVMFAIDRAGLVGADGQTHQGAFDLSFM 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MAPSDE E   M+ T       PS  RYPRG+G+GVE+    +   LE+GKG
Sbjct: 441 RCIPNMVIMAPSDENECRKMLYTGHK-HTGPSAVRYPRGSGMGVEIE--TEFTALEIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
           R++ +G++VA+L +GT + + L A+  L +     TVAD RF KPLD ALIR LA  H+V
Sbjct: 498 RMVRQGKKVAILNFGTFLGNALEAAEYLNA-----TVADMRFVKPLDEALIRQLAADHDV 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE  I GG G+ VV+F+ +D ++   +    L LPD +I  G+  +   + GL   
Sbjct: 553 LVTLEENVIAGGAGAGVVEFMMKDKIIKPVLN---LGLPDEFIHQGTQDELHEELGLDAK 609

Query: 540 HIAATVFNILGQ 551
            I  ++ + L +
Sbjct: 610 GIEQSILDYLAK 621


>gi|225077244|ref|ZP_03720443.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
           NRL30031/H210]
 gi|224951388|gb|EEG32597.1| hypothetical protein NEIFLAOT_02299 [Neisseria flavescens
           NRL30031/H210]
          Length = 629

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/547 (47%), Positives = 347/547 (63%), Gaps = 33/547 (6%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           MHTMRQ  GL+GF KR ESEYD FG GHSSTSI A LGMAV     G     VA+IGDGA
Sbjct: 91  MHTMRQYGGLAGFPKRCESEYDAFGVGHSSTSIGAALGMAVADKQLGNNRRSVAIIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAGQA+EA+N AG +D D++VILNDN+    P     G +P    L+S + R   +  L
Sbjct: 151 MTAGQAFEALNCAGDMDVDLLVILNDNEMSISPNV---GALPKY--LASNVVR-DMHGLL 204

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMI-----SGSGSTLFEELGLYYIGPVDGH 175
             ++  +  V  ++ G M ELA KV+   + +      +    +LFE  G  Y GPVDGH
Sbjct: 205 STIKAQSSKVLDKLPGAM-ELAQKVENKIKTLAGEAEHAKQSLSLFENFGFRYTGPVDGH 263

Query: 176 NVDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKF-DPATGKQFKS 234
           NV++LV +L++++  K  GP L+HV+T+KG GY +AE    KYH VAK        + K 
Sbjct: 264 NVENLVDVLKDLRGRK--GPQLLHVITKKGNGYKFAENDPVKYHAVAKLPSEVPAPEVKP 321

Query: 235 SARTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAV 294
           +A   +YT  F + L  +A  D+ +VAI  AM  G+GL  F ++FP R FDVGIAEQHAV
Sbjct: 322 AAAKPTYTQVFGQWLCDQAAADERLVAITPAMREGSGLVEFEQQFPDRYFDVGIAEQHAV 381

Query: 295 TFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGS 354
           TFA GLACEG+KP  AIYS+F+QRAYDQ+VHDV LQ LPV FA+DRAG+VGADGPTH G 
Sbjct: 382 TFAGGLACEGIKPVVAIYSTFLQRAYDQLVHDVALQNLPVLFAVDRAGIVGADGPTHAGL 441

Query: 355 FDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIP 414
           +D++F+ C+PNM+V APSDE E   +++T    +  PS  RYPRG G G  +  G + + 
Sbjct: 442 YDLSFLRCIPNMIVAAPSDENECRLLLSTCYQANS-PSAVRYPRGTGTGATISDGLETV- 499

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
            E+GKG I  EGE++A++ +G+ V     A +L  ++ L  TVAD RF KP+D  LI  L
Sbjct: 500 -EIGKGIIRREGEKIAVIAFGSMV-----APSLTAADKLNATVADMRFVKPIDEELIVRL 553

Query: 475 AKSHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVL---PDRYIDHGSPADQ 530
           A+SH+ ++T EE +  GG GS V++ LA+ G+       +P++L    D+  +HG P   
Sbjct: 554 ARSHDYIVTAEENAEQGGAGSAVLEVLAKHGIC------KPVLLLGVEDKVTEHGDPKKL 607

Query: 531 LAQAGLT 537
           LA  GL 
Sbjct: 608 LADLGLN 614


>gi|191173517|ref|ZP_03035044.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli F11]
 gi|300997393|ref|ZP_07181733.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 200-1]
 gi|422378052|ref|ZP_16458275.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 60-1]
 gi|432469853|ref|ZP_19711906.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE206]
 gi|432712141|ref|ZP_19947193.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE8]
 gi|433076618|ref|ZP_20263184.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE131]
 gi|190906226|gb|EDV65838.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli F11]
 gi|300304212|gb|EFJ58732.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 200-1]
 gi|324010680|gb|EGB79899.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli MS 60-1]
 gi|430999920|gb|ELD15994.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE206]
 gi|431259656|gb|ELF52019.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE8]
 gi|431601195|gb|ELI70712.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE131]
          Length = 620

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/544 (47%), Positives = 343/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KCRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDATGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|451982551|ref|ZP_21930860.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrospina gracilis 3/211]
 gi|451760197|emb|CCQ92153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Nitrospina gracilis 3/211]
          Length = 662

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 249/559 (44%), Positives = 355/559 (63%), Gaps = 24/559 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ +GLSGFTKR E+E+D +  GH  TSISA L  A  RDLK   +NV+A+IGDG+
Sbjct: 89  FHTLRQYEGLSGFTKREENEHDHWNCGHGGTSISAALAFAKARDLKKEDHNVLAIIGDGS 148

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           MTAG A+E +N+ G+L +DM+V+LNDN ++S+           VG +S+ LS++ + + +
Sbjct: 149 MTAGMAFEGLNHTGHLQTDMVVVLNDN-EMSISNN--------VGGMSAHLSQIMTGQVM 199

Query: 121 REL-REVAKGV--TKQIGGPMHELAAKVDEYARGM-ISGSGSTLFEELGLYYIGPVDGHN 176
            ++ RE+ + +     IG  +   A K+DE  +G+ I G    LFE+LG  YIGP+DGHN
Sbjct: 200 TKIKREIDQLLLAIPGIGKDISRYAHKIDEAIKGVFIPGR---LFEDLGFRYIGPIDGHN 256

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
            D L+   E +K  K  GP L+HV+T KG+GY  AE+ AD +HG + FD  TG  F   A
Sbjct: 257 TDALIETFEAIKGLK--GPTLVHVITRKGKGYKVAEEKADVWHGASPFDIETG-VFHKKA 313

Query: 237 RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTF 296
              +YT+ FA+ALI  A+ D+ ++ I AAM  G G++ F + FP R FDVG+AEQHAV F
Sbjct: 314 SNPNYTSVFAQALIDLAKEDETIIGITAAMPDGAGISKFGKEFPERTFDVGMAEQHAVDF 373

Query: 297 AAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFD 356
           A  +A +GL+P  AIYS+F+QRAYDQVVHDV L  +PV FAMDRAG+VG DG TH G +D
Sbjct: 374 AGAMALKGLRPVAAIYSTFLQRAYDQVVHDVCLMNIPVVFAMDRAGIVGEDGATHQGLYD 433

Query: 357 VTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLE 416
           + ++  LPNMV+MAP DE E+ HM+ T A   + P+  RYPRG G+GV+L P  +   +E
Sbjct: 434 IAYLRTLPNMVIMAPKDENEMRHMLKT-AIYHNGPAALRYPRGAGLGVDLDPEIQ--EME 490

Query: 417 VGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAK 476
           +GKG +L EG  +AL+ YG  V+     +  LE  G+ + V +ARF KPLD  L+   A+
Sbjct: 491 IGKGEVLKEGTDIALVAYGHMVRPAENVAKKLEEQGISVAVINARFVKPLDEELVLRYAR 550

Query: 477 SHEVLITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAG 535
           + + ++T+EE S  GGFGS V++ L ++   D   + + + + D  ++HG+PA       
Sbjct: 551 ATQCMVTLEEHSEQGGFGSAVLEALHKEP-SDQAFQVKCIGVADIVVEHGAPALVRRDLK 609

Query: 536 LTPSHIAATVFNILGQTRE 554
           +    +  T+    GQ  E
Sbjct: 610 IDEEGLLETISQFYGQVME 628


>gi|52425114|ref|YP_088251.1| 1-deoxy-D-xylulose-5-phosphate synthase [Mannheimia
           succiniciproducens MBEL55E]
 gi|81609544|sp|Q65TP4.1|DXS_MANSM RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|52307166|gb|AAU37666.1| Dxs protein [Mannheimia succiniciproducens MBEL55E]
          Length = 617

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 255/550 (46%), Positives = 349/550 (63%), Gaps = 27/550 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG+  F  R ESE+D    GHSSTSISAGLG+A+  + +     ++ VIGDGA
Sbjct: 91  MTTIRQKDGIHPFPWREESEFDVLSVGHSSTSISAGLGIAIAAEKENAGRKIICVIGDGA 150

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG L +DM+VILNDN ++S+           VG L++ L+R+ S    
Sbjct: 151 ITAGMAFEAMNHAGALHTDMLVILNDN-EMSISEN--------VGGLNNHLARIFSGSIY 201

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LR+ +K +   +  P+     K +E+ +G+IS   STLFEELG  YIGP+DGHN+++L
Sbjct: 202 SSLRDSSKKILDTMP-PIKNFMKKTEEHMKGVISPI-STLFEELGFNYIGPIDGHNIEEL 259

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
           +A L  +K  K  GP  +H+ T+KG+GY  AE+    +HGV KFD  TG+  KS+A T +
Sbjct: 260 IATLSNMKTLK--GPQFLHIRTKKGKGYTPAEQDPIGFHGVPKFDYHTGQLPKSTA-TPT 316

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           Y+  F E L   AE D+ ++ I  AM  G+G+  F  RFP + FDV IAEQHAVT AAGL
Sbjct: 317 YSQIFGEWLCETAEQDEKLIGITPAMREGSGMVEFSNRFPDQYFDVAIAEQHAVTLAAGL 376

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G KP  AIYS+F+QRAYDQV+HDV +Q LPV FA+DRAG+VGADGPTH G+FD++F+
Sbjct: 377 AIGGYKPVVAIYSTFLQRAYDQVIHDVAIQNLPVLFAIDRAGIVGADGPTHQGAFDLSFL 436

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PN+++MAPS+E E   M+ T      +P+  RYPRGN IGVEL P  K   LE+GK 
Sbjct: 437 RCIPNLIIMAPSNENECRLMLHTGYCC-GKPAAVRYPRGNAIGVELEPLRK---LEIGKS 492

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            ++ +G+ +A+L +GT     L  +AL  +  L  TV D RF KPLDH  I  LAK+H  
Sbjct: 493 NLVRQGQDIAILNFGT-----LLPNALDVAEKLNATVVDMRFVKPLDHERINELAKTHRT 547

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + +    +    V    L LPD ++  G+  + L +  L  +
Sbjct: 548 LVTLEENTIQGGAGSAVSEVV---NIQQHHVNILHLGLPDEFVAQGTQQEVLKELKLDAT 604

Query: 540 HIAATVFNIL 549
            I   + N L
Sbjct: 605 GIEEQIKNFL 614


>gi|416895844|ref|ZP_11925728.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli STEC_7v]
 gi|417114556|ref|ZP_11965827.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 1.2741]
 gi|422802297|ref|ZP_16850791.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M863]
 gi|323965103|gb|EGB60562.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli M863]
 gi|327254742|gb|EGE66358.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli STEC_7v]
 gi|386141631|gb|EIG82781.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli 1.2741]
          Length = 620

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/547 (47%), Positives = 346/547 (63%), Gaps = 32/547 (5%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GV+L P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVKLTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE LI
Sbjct: 500 KRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALI 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLV---LPDRYIDHGSPADQLAQAGLTP 538
           T+EE +I GG GS V + L       G  K  P++   LPD +I  G+  +  A+ GL  
Sbjct: 555 TIEENAIMGGAGSGVNEVLM------GHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDA 608

Query: 539 SHIAATV 545
           + + A +
Sbjct: 609 AGMEAKI 615


>gi|289548624|ref|YP_003473612.1| deoxyxylulose-5-phosphate synthase [Thermocrinis albus DSM 14484]
 gi|289182241|gb|ADC89485.1| deoxyxylulose-5-phosphate synthase [Thermocrinis albus DSM 14484]
          Length = 625

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 253/526 (48%), Positives = 339/526 (64%), Gaps = 23/526 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  G+SGF +R ES YD FG GHSSTSISA LG  V +DL  ++  VVAVIGDGAMT
Sbjct: 94  TLRQYGGISGFLRRDESPYDAFGAGHSSTSISAALGFRVAKDLMEKEGYVVAVIGDGAMT 153

Query: 63  AGQAYEAMNNAGYLDSD-MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLR 121
           AG A+EA+NNAG++  +  IVILNDN ++S+         P VGA+S+ LSR+ S   ++
Sbjct: 154 AGMAFEALNNAGHIRPNKFIVILNDN-EMSIS--------PNVGAISTYLSRIISGSFVQ 204

Query: 122 ELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLV 181
           E R+  K + + +G P   +    +E+ +G+IS     LFEELG  YIGPV+GH++  L 
Sbjct: 205 ETRQKIKKLLEHLGTPALRVVKLTEEFLKGLISPG--VLFEELGFNYIGPVNGHDLVSLE 262

Query: 182 AILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSY 241
             LE VK  +  GPVL+HV T+KG+GY  AE     +HGVA +   +G +F       ++
Sbjct: 263 RTLENVKAIE--GPVLLHVYTKKGKGYHPAENDPVTWHGVAPYKRESG-EFVKKPSPPTW 319

Query: 242 TTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLA 301
           T+ F +A++  AE+D  VV I  AM  G+GL  F +RFP R FDVGIAEQHA TFA GLA
Sbjct: 320 TSVFGKAIVELAEMDPKVVVITPAMKEGSGLVEFAKRFPQRFFDVGIAEQHACTFAGGLA 379

Query: 302 CEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMA 361
            EG+KP    YS+F+QRAYDQV+HD+ LQKL V FA+DRAGLVG DGPTH G FD++++ 
Sbjct: 380 AEGMKPVACYYSTFLQRAYDQVIHDIALQKLHVVFAIDRAGLVGDDGPTHHGVFDLSYLR 439

Query: 362 CLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGR 421
           C+PNMVV AP DE EL  ++ T    +  P   RYPRG   GV    G + IP  +G   
Sbjct: 440 CVPNMVVCAPKDEQELRDLLYTGLQYNG-PFAVRYPRGPAYGVPT-EGFRNIP--IGSWE 495

Query: 422 ILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVL 481
           IL+EGE   +L  G  V   + AS  L   G+R  V +ARF KP+DH L+  LA+ +++ 
Sbjct: 496 ILVEGEDCVILAVGYTVYQAVKASEELRKEGVRACVVNARFVKPMDHTLLLQLARQYDLF 555

Query: 482 ITVEEGS-IGGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGS 526
           ITVE+ + +GGFGS V++F AQ G+    V    L +PD +++HG+
Sbjct: 556 ITVEDNTVVGGFGSGVLEFFAQHGITKRVVL---LGVPDTFVEHGN 598


>gi|282900458|ref|ZP_06308407.1| Deoxyxylulose-5-phosphate synthase [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194651|gb|EFA69599.1| Deoxyxylulose-5-phosphate synthase [Cylindrospermopsis raciborskii
           CS-505]
          Length = 630

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/553 (45%), Positives = 348/553 (62%), Gaps = 25/553 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ DG++G+ KR ES++D FG GH+STSISA LGMA+ RD+KG K  V AVIGDGA
Sbjct: 87  FHTLRQKDGVAGYLKRCESQFDHFGAGHASTSISAALGMALARDMKGEKFKVAAVIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L  ++++V+LNDN+    P          VGA+   L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPKTNLLVVLNDNEMSISPN---------VGAIPRYLNKMRLSPP 197

Query: 120 LRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
           ++ + +  +   K I     EL    +   R  +S  G+ +FEELG  Y+GPVDGHN+++
Sbjct: 198 VQFIADNIEEQLKHIPFVGDELERVTEGMKRLAMSKLGA-VFEELGFTYMGPVDGHNLEE 256

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA-RT 238
           L+   ++    +  GPVL+HV T KG+GY  AEK    YH    F+ ATGK   S+  + 
Sbjct: 257 LITTFQQAH--QIPGPVLVHVATVKGKGYEVAEKDQVGYHAQNPFNLATGKAIPSNKPKP 314

Query: 239 QSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAA 298
            +Y+  F+  L+  AE +  +V I AAM  GTGL+    + P +  DVGIAEQHAVT AA
Sbjct: 315 PAYSKVFSHTLVKLAEQNPKIVGITAAMATGTGLDKLQAKLPHQYIDVGIAEQHAVTLAA 374

Query: 299 GLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVT 358
           GLACEG++P  AIYS+F+QRAYDQ++HDV +Q LPV F +DRAG+VGADGPTH G +D+ 
Sbjct: 375 GLACEGMRPVAAIYSTFLQRAYDQIIHDVCIQNLPVFFCLDRAGIVGADGPTHQGMYDIA 434

Query: 359 FMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEV 417
           ++ C+PNMV+MAP DEAEL  MV T       P   R+PRGNG GV  P   +G  PLE+
Sbjct: 435 YLRCIPNMVLMAPKDEAELQRMVVTGVEYTSGPIAMRFPRGNGYGV--PLMEEGWEPLEI 492

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GKG IL +G+ + ++GYGT V S +  + +L  +G+  +V +ARF KPLD  LI  LA  
Sbjct: 493 GKGEILRQGDDLLIVGYGTMVNSGMQVAQILREHGIEASVINARFVKPLDIDLIVPLAGK 552

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGT--VKWRPLVLPDRYIDHGSPADQLAQA 534
              ++T+EEG + GGFGS V      + LLD    V  + + +PD  +DH +P +     
Sbjct: 553 IGRVVTLEEGCLMGGFGSAVA-----EALLDANVVVPVKRIGIPDELVDHATPEESKVTL 607

Query: 535 GLTPSHIAATVFN 547
           GLT   IA  +  
Sbjct: 608 GLTSQQIADDILQ 620


>gi|37527746|ref|NP_931091.1| 1-deoxy-D-xylulose-5-phosphate synthase [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|41016942|sp|Q7N0J7.1|DXS_PHOLL RecName: Full=1-deoxy-D-xylulose-5-phosphate synthase; AltName:
           Full=1-deoxyxylulose-5-phosphate synthase; Short=DXP
           synthase; Short=DXPS
 gi|36787182|emb|CAE16259.1| 1-deoxy-D-xylulose 5-phosphate synthase
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS) [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 621

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 256/546 (46%), Positives = 345/546 (63%), Gaps = 26/546 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           + T+RQ +GL  F  R ESEYD    GHSSTSISAGLGMA+    +G+    V VIGDGA
Sbjct: 95  IDTIRQKNGLHPFPWRDESEYDTLCVGHSSTSISAGLGMAIAAQREGKGRRTVCVIGDGA 154

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EAMN+AG +D D++VILNDN ++S+           VGAL++ L++L S +  
Sbjct: 155 ITAGMAFEAMNHAGDIDPDILVILNDN-EMSISEN--------VGALNNHLAQLLSGKLY 205

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             LRE  K V   +  P+ EL  K +E+ +GM+     TLFEELG  YIGP+DGH+V  L
Sbjct: 206 TTLREGGKKVFSNLP-PIKELLKKTEEHIKGMVVPG--TLFEELGFNYIGPIDGHDVLTL 262

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQS 240
              L+ ++  K  GP L+H++T+KGRGY  AEK    +H V KFDP TG   KSS    +
Sbjct: 263 TQTLKNMRELK--GPQLLHIMTKKGRGYAPAEKDPISWHAVPKFDPTTGALPKSSDNRPT 320

Query: 241 YTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGL 300
           ++  F + L  EA  DK ++AI  AM  G+G+  F R +P + FDV IAEQHAVTFAAGL
Sbjct: 321 FSKIFGDWLCEEAANDKKLMAITPAMREGSGMVRFSREYPDQYFDVAIAEQHAVTFAAGL 380

Query: 301 ACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFM 360
           A  G +P  AIYS+F+QRAYDQV+HD+ +Q LPV FA+DR G+VGADG TH G+FD++F+
Sbjct: 381 AIGGYRPIVAIYSTFLQRAYDQVIHDIAIQNLPVLFAIDRGGIVGADGQTHQGAFDLSFL 440

Query: 361 ACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKG 420
            C+PNMV+MAPSDE E   M+ T       P   RYPRG G G E  P  +   L +GKG
Sbjct: 441 RCIPNMVIMAPSDENECRQMLHTGYHYQQGPVAVRYPRGTGTGAEPQPFEQ---LPIGKG 497

Query: 421 RILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEV 480
            I  +G +VA+L +GT +   + A+  L++     TV D RF KPLD  LI  +A +H++
Sbjct: 498 VIRRQGNKVAILNFGTLLPDAITAAESLDA-----TVVDMRFVKPLDKELILDMADNHDL 552

Query: 481 LITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPS 539
           L+T+EE +I GG GS V + L Q G L   V+   + LPD+++  GS  +  A  GL  +
Sbjct: 553 LVTLEENAIMGGAGSGVNELLMQKGRL---VQILNIGLPDQFVPQGSQEEIKADLGLDAA 609

Query: 540 HIAATV 545
            I  ++
Sbjct: 610 GIQNSI 615


>gi|118580817|ref|YP_902067.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM
           2379]
 gi|118503527|gb|ABL00010.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pelobacter propionicus DSM
           2379]
          Length = 626

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 269/548 (49%), Positives = 346/548 (63%), Gaps = 23/548 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+R+ DG+SGF KR ES +D F  GH+STSISA  G+A  RDL GR+N V+AVIGDG+MT
Sbjct: 90  TLRKLDGISGFPKRDESPHDAFEVGHASTSISAATGLAAARDLAGRRNKVLAVIGDGSMT 149

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
            G AYEAMN+AG+++ DMIVILNDN ++S+           VGALS+ L+R  S+  +  
Sbjct: 150 GGMAYEAMNHAGHMNRDMIVILNDN-EMSIAEN--------VGALSNFLTRTGSSEFVYR 200

Query: 123 LR---EVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDD 179
            +   E   G    +G  +  LA K+++  +G  +     LFE  G  YIGP+DGH++  
Sbjct: 201 FKKNVESFLGRKDTVGKNLLHLAKKLEDSFKGFFTPG--MLFEAFGFEYIGPIDGHDLPM 258

Query: 180 LVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQ 239
           L+  LE+VK  K    VLIHV+T+KG+GY  AE     +HGV  FD  +G+  K      
Sbjct: 259 LLETLEKVK--KYHDAVLIHVLTKKGKGYKPAEDDPSLFHGVGPFDLESGRVLKGKGGAA 316

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
           SYT  F  AL   A  D+ VVAI AAM  GTGL  F R+FP R FDVGIAEQHAVTFAAG
Sbjct: 317 SYTAIFGSALCKLAADDERVVAITAAMPDGTGLIPFSRQFPKRFFDVGIAEQHAVTFAAG 376

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           LA +G +P   +YSSF+QRAYD V HDV LQ LPV FA+DRAG+VG DGPTH GS D++ 
Sbjct: 377 LATQGFRPVFTVYSSFLQRAYDLVFHDVCLQNLPVIFALDRAGVVGNDGPTHHGSLDISL 436

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           +  LPNM VMAP DE EL HM+ATA  +   P   RYPRGNG+GV L       PL VG+
Sbjct: 437 LRHLPNMTVMAPRDENELQHMLATALGMQG-PVALRYPRGNGVGVAL--DQIITPLPVGR 493

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESN-GLRLTVADARFCKPLDHALIRSLAKSH 478
             +L EG+  A+L  G+ V   L A+  LE + G  L V +ARF KPLD  LI+ LA+++
Sbjct: 494 AEVLREGKDGAVLALGSMVHPALEAALQLERDGGPSLAVVNARFVKPLDEELIQFLARTY 553

Query: 479 EVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLT 537
             LIT+EE ++ GGFGS V++ L + G + GT   R L  PD  I  G      A  GL 
Sbjct: 554 GRLITLEENALQGGFGSAVLELLEEKG-IRGTRVLR-LGYPDAQIPQGDQGVLRAMLGLD 611

Query: 538 PSHIAATV 545
           P+ +A+++
Sbjct: 612 PAGLASSM 619


>gi|296133202|ref|YP_003640449.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
 gi|296031780|gb|ADG82548.1| deoxyxylulose-5-phosphate synthase [Thermincola potens JR]
          Length = 638

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 254/530 (47%), Positives = 344/530 (64%), Gaps = 28/530 (5%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GLSGF KRSESEYD F TGHSSTSISA LGMA+ RDLK    +V+AVIGDGA+T
Sbjct: 92  TLRQYGGLSGFPKRSESEYDSFNTGHSSTSISAVLGMALARDLKKENFHVIAVIGDGALT 151

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQS----NR 118
            G A+EA+N+AG+L +++IV+LNDN ++S+           VGALS  LSR+++    NR
Sbjct: 152 GGMAFEALNHAGHLGTNIIVVLNDN-EMSISEN--------VGALSGYLSRMRTDPMYNR 202

Query: 119 PLRELREVAKGVTKQIGGPMHELAAKV-DEYARGMISGSGSTLFEELGLYYIGPVDGHNV 177
              E+  + K +   IG  + +   ++ D +   ++ G    +FEELG  Y+GP+DGHN+
Sbjct: 203 HKEEMENLLKKIP-SIGPTVFKAIERIKDSFKYLVVPG---MIFEELGFTYLGPIDGHNI 258

Query: 178 DDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSAR 237
            ++  +LE  K TK  GP+++HVVT KG+GY  AEK  D++HG+  F+  TG+   +S+ 
Sbjct: 259 MEVKTVLERAKRTK--GPIMVHVVTRKGKGYEPAEKNPDRFHGIGPFNINTGEPVSASS- 315

Query: 238 TQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFA 297
             SYT  F + L   A  D+ ++AI AAM  GTGL  F   FP R FDVGIAEQHAVT A
Sbjct: 316 VVSYTEIFGKTLCQLAADDERLLAITAAMPTGTGLTRFAELFPDRFFDVGIAEQHAVTLA 375

Query: 298 AGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDV 357
           AGLA EG +P  AIYS+F+QRAYDQ++HDV +Q LPV FA+DRAGLVG DG TH G +D 
Sbjct: 376 AGLATEGFRPVVAIYSTFLQRAYDQILHDVAMQDLPVIFAVDRAGLVGEDGETHQGIYDF 435

Query: 358 TFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEV 417
            ++  +PNMV+MAP DE EL  M+ TA  + D+P   RYPRG+GIGV++    K IP  V
Sbjct: 436 AYLRHIPNMVIMAPKDENELRFMLKTAQLL-DKPVAIRYPRGSGIGVQISEEIKDIP--V 492

Query: 418 GKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKS 477
           GK  +L +G+ +AL   G  V   LAA+  L  +G+ + V + RF KPLD   I    + 
Sbjct: 493 GKAEVLRDGKDIALFAIGPLVYEALAAAESLHEHGIEVAVVNCRFIKPLDVETITEYTRK 552

Query: 478 HEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGS 526
              +IT+EE ++ GGFGS V++ L + GL         + LPDR+I+ G+
Sbjct: 553 TGKVITLEEHALEGGFGSAVLELLQEQGL---RAHVERIGLPDRFIEQGA 599


>gi|284928885|ref|YP_003421407.1| 1-deoxy-D-xylulose-5-phosphate synthase [cyanobacterium UCYN-A]
 gi|284809344|gb|ADB95049.1| 1-deoxy-D-xylulose-5-phosphate synthase [cyanobacterium UCYN-A]
          Length = 636

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/552 (44%), Positives = 351/552 (63%), Gaps = 23/552 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
            HT+RQ +G++G+ KR ES +D FG GH+STSISAGLGMA+ RD KG    VV++IGDGA
Sbjct: 87  FHTLRQKNGIAGYLKRCESRFDHFGAGHASTSISAGLGMAIARDNKGENYKVVSIIGDGA 146

Query: 61  MTAGQAYEAMNNAGYL-DSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRP 119
           +T G A EA+N+AG+L ++ ++V+LNDN ++S+         P VGA+S  L++++ + P
Sbjct: 147 LTGGMALEAINHAGHLPNTSLMVVLNDN-EMSIS--------PNVGAISRYLNKVRLSDP 197

Query: 120 LRELREVAKGVTKQI---GGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHN 176
           ++ + +  +   K +   G  +     ++ E  + +       + EELG  Y GP+DGHN
Sbjct: 198 VQFISDNIEEQFKHLPFFGDSLTPEMERLREGVKRLAMPKVGAVIEELGFKYFGPIDGHN 257

Query: 177 VDDLVAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSA 236
           +++L++  ++    K TGPV +HV T KG+GY  AEK    YH  + F  ATGK   S+ 
Sbjct: 258 IEELISTFKQAH--KATGPVFVHVSTVKGKGYEIAEKDQVGYHAQSPFSLATGKAIPSNT 315

Query: 237 -RTQSYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVT 295
            +  SY+  FA  L   A+ +  ++ I AAM  GTGL+    + P +  DVGIAEQHAVT
Sbjct: 316 PKPPSYSKVFAHTLTTLAQNNSKIIGITAAMATGTGLDKLQAKLPEQYIDVGIAEQHAVT 375

Query: 296 FAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSF 355
            AAGLACEG++P  AIYS+F+QRAYDQV+HDV +Q LPV F +DRAG+VGADGPTH G +
Sbjct: 376 LAAGLACEGIRPLVAIYSTFLQRAYDQVLHDVAIQNLPVFFCLDRAGIVGADGPTHQGLY 435

Query: 356 DVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVEL-PPGNKGIP 414
           D++++ C+PNM +MAP DEAEL  MV T       P   R+PRG+G+GV L   G + IP
Sbjct: 436 DISYLRCIPNMTIMAPKDEAELQRMVVTGINHVSGPIAMRFPRGSGVGVPLMEEGWESIP 495

Query: 415 LEVGKGRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSL 474
             +GKG IL  G+ + L+ YGT V   L  + +L+ +G+  TV +ARF KPLD  LI  L
Sbjct: 496 --IGKGEILRHGDDILLVAYGTMVNQSLQVAEILKEHGIEATVINARFVKPLDIDLIAPL 553

Query: 475 AKSHEVLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQ 533
           AKS   ++T+EEG + GGFGS V + L     LD  V  + + +PD+ +DH +P +  A+
Sbjct: 554 AKSIGKVVTLEEGCLMGGFGSAVTEALMD---LDVVVPIKRIGIPDQLVDHATPDESKAE 610

Query: 534 AGLTPSHIAATV 545
             LT   IA T+
Sbjct: 611 LELTSPQIAETI 622


>gi|419900614|ref|ZP_14420040.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O26:H11
           str. CVM9942]
 gi|419908307|ref|ZP_14427041.1| deoxyxylulose-5-phosphate synthase [Escherichia coli O26:H11 str.
           CVM10026]
 gi|388375261|gb|EIL38287.1| deoxyxylulose-5-phosphate synthase [Escherichia coli O26:H11 str.
           CVM10026]
 gi|388377655|gb|EIL40450.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli O26:H11
           str. CVM9942]
          Length = 620

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/544 (47%), Positives = 343/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVLSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPDAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|432464429|ref|ZP_19706537.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE205]
 gi|432582529|ref|ZP_19818939.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE57]
 gi|433071466|ref|ZP_20258168.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE129]
 gi|433118967|ref|ZP_20304681.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE157]
 gi|433181950|ref|ZP_20366253.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE85]
 gi|430997180|gb|ELD13447.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE205]
 gi|431119545|gb|ELE22544.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE57]
 gi|431593653|gb|ELI63945.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE129]
 gi|431649316|gb|ELJ16674.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE157]
 gi|431711846|gb|ELJ76153.1| 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli KTE85]
          Length = 620

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/544 (47%), Positives = 343/544 (63%), Gaps = 26/544 (4%)

Query: 3   TMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGAMT 62
           T+RQ  GL  F  R ESEYD    GHSSTSISAG+G+AV  + +G+    V VIGDGA+T
Sbjct: 97  TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAIT 156

Query: 63  AGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRE 122
           AG A+EAMN+AG +  DM+V+LNDN ++S+           VGAL++ L++L S +    
Sbjct: 157 AGMAFEAMNHAGDIRPDMLVVLNDN-EMSISEN--------VGALNNHLAQLLSGKLYSS 207

Query: 123 LREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDLVA 182
           LRE  K V   +  P+ EL  + +E+ +GM+     TLFEELG  YIGPVDGH+V  L+ 
Sbjct: 208 LREGGKKVFSGVP-PIKELLKRTEEHIKGMVVPG--TLFEELGFNYIGPVDGHDVLGLIT 264

Query: 183 ILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGKQFKSSARTQSYT 242
            L+ +++ K  GP  +H++T+KGRGY  AEK    +H V KFDP++G   KSS    SY+
Sbjct: 265 TLKNMRDLK--GPQFLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYS 322

Query: 243 TYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLAC 302
             F + L   A  D  ++AI  AM  G+G+  F R+FP R FDV IAEQHAVTFAAGLA 
Sbjct: 323 KIFGDWLCETAAKDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAI 382

Query: 303 EGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTFMAC 362
            G KP  AIYS+F+QRAYDQV+HDV +QKLPV FA+DRAG+VGADG TH G+FD++++ C
Sbjct: 383 GGYKPIVAIYSTFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRC 442

Query: 363 LPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRI 422
           +P MV+M PSDE E   M+ T    +D PS  RYPRGN +GVEL P  K   L +GKG +
Sbjct: 443 IPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK---LPIGKGIV 499

Query: 423 LIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHEVLI 482
              GE++A+L +GT     L   A   +  L  T+ D RF KPLD ALI  +A SHE L+
Sbjct: 500 KRRGEKLAILNFGT-----LMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALV 554

Query: 483 TVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHI 541
           TVEE +I GG GS V + L         V    + LPD +I  G+  +  A+ GL  + +
Sbjct: 555 TVEENAIMGGAGSGVNEVLMAH---RKPVPVLNIGLPDFFIPQGTQEEMRAELGLDATGM 611

Query: 542 AATV 545
            A +
Sbjct: 612 EAKI 615


>gi|422651840|ref|ZP_16714631.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|330964914|gb|EGH65174.1| 1-deoxy-D-xylulose-5-phosphate synthase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 631

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/547 (46%), Positives = 348/547 (63%), Gaps = 27/547 (4%)

Query: 1   MHTMRQTDGLSGFTKRSESEYDCFGTGHSSTSISAGLGMAVGRDLKGRKNNVVAVIGDGA 60
           M T+RQ DG++ F +RSESEYD FG GHSSTSISA LGMA+   L+G +   +AVIGDGA
Sbjct: 102 MSTLRQKDGVAAFPRRSESEYDTFGVGHSSTSISAALGMAIASRLQGSERKSIAVIGDGA 161

Query: 61  MTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPL 120
           +TAG A+EA+N+A  + ++M+VILNDN  +S+           VG LS+ L+++ S+R  
Sbjct: 162 LTAGMAFEALNHAPEVAANMLVILNDN-DMSISRN--------VGGLSNYLAKILSSRTY 212

Query: 121 RELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNVDDL 180
             +RE +K V  ++ G   E+A + +EYA+GM+     TLFEELG  YIGP+DGH++  L
Sbjct: 213 TSMREGSKKVLSRLPGAW-EIARRTEEYAKGMLVPG--TLFEELGWNYIGPIDGHDLPTL 269

Query: 181 VAILEEVKNTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVAKFDPATGK-QFKSSARTQ 239
           +A L  +++ K  GP  +HVVT+KG+G+  AE     YH + K +P       +    + 
Sbjct: 270 IATLRNMRDLK--GPQFLHVVTKKGKGFAPAEVDPIGYHAITKLEPLNAPVSVQKKVSSP 327

Query: 240 SYTTYFAEALIAEAEVDKDVVAIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAG 299
            Y+  F + +   AEVD  +V I  AM  G+ L  F  RFP R FDV IAEQHAVT AAG
Sbjct: 328 KYSGVFGQWICDMAEVDSRLVGITPAMKEGSDLVDFSERFPERYFDVAIAEQHAVTLAAG 387

Query: 300 LACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGSFDVTF 359
           +ACEG KP  AIYS+F+QR YDQ+VHDV +Q L V FA+DRAGLVG DGPTH GSFD+++
Sbjct: 388 MACEGSKPVVAIYSTFLQRGYDQLVHDVAVQNLDVLFAIDRAGLVGEDGPTHAGSFDLSY 447

Query: 360 MACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGK 419
           + C+P +VVM PSDE EL  +++T   +   P+  RYPRG G    +       P+E+GK
Sbjct: 448 LRCIPGIVVMTPSDENELRKLLST-GYLHTGPAAVRYPRGTGPNAVIEANLD--PVEIGK 504

Query: 420 GRILIEGERVALLGYGTAVQSCLAASALLESNGLRLTVADARFCKPLDHALIRSLAKSHE 479
           G +  +G+ VA+L +G  +     A AL+ +  L  TV D RF KPLD AL+R  A SH+
Sbjct: 505 GVVRRQGQGVAILAFGVQL-----AEALVVAEKLNATVIDMRFVKPLDEALVRETAASHQ 559

Query: 480 VLITVEEGSI-GGFGSHVVQFLAQDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTP 538
           +L+T+EE ++ GG G+ V +FLA+  +L   +    L LPD Y++H  PA  LA+ GL  
Sbjct: 560 LLVTLEENAVMGGAGAAVSEFLARANILKSVLH---LGLPDVYVEHAKPAQMLAECGLDA 616

Query: 539 SHIAATV 545
             I A +
Sbjct: 617 EGIEAAI 623


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,990,298,118
Number of Sequences: 23463169
Number of extensions: 399699626
Number of successful extensions: 1051630
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8380
Number of HSP's successfully gapped in prelim test: 6296
Number of HSP's that attempted gapping in prelim test: 1009401
Number of HSP's gapped (non-prelim): 19934
length of query: 563
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 415
effective length of database: 8,886,646,355
effective search space: 3687958237325
effective search space used: 3687958237325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)