BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>008498
MASADNGKHKKEIEESNDTQAKNQGQIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNRIR
LLKFGSASNKFKQIAEQRDEISRSVACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKEWIR
NPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLY
QHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCG
LNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAQVPITTGESV
RPDQLRLKSLEKRYSFASSDEQKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNM
ERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFW
RIQLRKRFNLPAYNFCCGHPAISDCTLWLCCCWCTLAQEARTGNAYEIIEDKFCRKQMDN
GDQLSPLPREDGMVQFRSDPNSPNVNSSSTPKKSIGNPPSPSRFSKEYYSPERQLYAIEE
PSAKGKDETMSPPAPSLIQREYS

High Scoring Gene Products

Symbol, full name Information P value
AT3G10980 protein from Arabidopsis thaliana 7.0e-180
AT5G05350 protein from Arabidopsis thaliana 1.3e-164
AT1G11380 protein from Arabidopsis thaliana 0.00069

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  008498
        (563 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2085502 - symbol:AT3G10980 "AT3G10980" species...  1746  7.0e-180  1
TAIR|locus:2153544 - symbol:AT5G05350 "AT5G05350" species...  1602  1.3e-164  1
TAIR|locus:2200081 - symbol:AT1G11380 "AT1G11380" species...   114  0.00069   1


>TAIR|locus:2085502 [details] [associations]
            symbol:AT3G10980 "AT3G10980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR006461 Pfam:PF04749 TIGRFAMs:TIGR01571
            InterPro:IPR021369 Pfam:PF11204 HOGENOM:HOG000238418
            ProtClustDB:CLSN2686623 EMBL:AY062465 EMBL:BT000119 IPI:IPI00538610
            RefSeq:NP_187709.5 UniGene:At.63533 STRING:Q8W4N1 PaxDb:Q8W4N1
            PRIDE:Q8W4N1 EnsemblPlants:AT3G10980.1 GeneID:820269
            KEGG:ath:AT3G10980 TAIR:At3g10980 eggNOG:NOG295172 OMA:KPNEWMH
            PhylomeDB:Q8W4N1 Genevestigator:Q8W4N1 Uniprot:Q8W4N1
        Length = 563

 Score = 1746 (619.7 bits), Expect = 7.0e-180, P = 7.0e-180
 Identities = 352/574 (61%), Positives = 415/574 (72%)

Query:     1 MASADNGKHKKEIEESNDTQAKNQG--QIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNR 58
             M S  +G  K EIEESN +  KN      PLD+S+SR+TL+   KP   S+S      +R
Sbjct:     1 MGSNCDGNLKAEIEESNGSSGKNTKVPPCPLDVSTSRRTLIGDGKPRRWSISALPDASSR 60

Query:    59 IRLLKFGSASNKFKQIAEQRDEISRSVACSSG--SHGFRDRLNGVFTRKVDWVSIKKMCK 116
              +LLKFGS S KFK++AE RDE+SRSV  SS   SH FR+R++GV  RK+DW S+  M K
Sbjct:    61 FQLLKFGSPSAKFKKMAEDRDEVSRSVTSSSNGSSHNFRERISGVLHRKIDWSSLMNMGK 120

Query:   117 EWIRNPMNMALLAWVICVAVSGAILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTL 176
             EWIRNP+NMAL  W++ VAVSGAILF+V+TGMLN A+P+KSQRD WFEVNNQILN LFTL
Sbjct:   121 EWIRNPINMALFVWILVVAVSGAILFMVMTGMLNHALPKKSQRDAWFEVNNQILNGLFTL 180

Query:   177 MCLYQHPKRLYHLVLLFRWSPKDIAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQY 236
             MCLYQHPKR YHLVLL RW   DI KLRK YCK+GTYKP+EW H+MVVVILL+LNCFAQY
Sbjct:   181 MCLYQHPKRFYHLVLLCRWKHDDITKLRKAYCKDGTYKPNEWMHIMVVVILLHLNCFAQY 240

Query:   237 ALCGLNVGYRRSDRPAIGVGICISVAIGAPAFAGVYSMMSPLGKDY-DSQRDEEAQVPIT 295
             ALCGLNVGYRRS+RP IGV ICIS AIGAPA AG+Y+++SPLGKDY DS  DEE Q+   
Sbjct:   241 ALCGLNVGYRRSERPPIGVAICISAAIGAPAVAGLYTILSPLGKDYNDSNEDEENQLKQR 300

Query:   296 TGESVRPDQLRLKSLEKRYSFASSD----EQKVVVNQPRWSGGILDIWNDISLAYLSLFC 351
                SV     R  +LE+RYSFAS+     +  V V+ P+WSGGILDIW+DISLAYLSLFC
Sbjct:   301 EEGSVN----RRFTLERRYSFASASTGVGDGMVPVSDPQWSGGILDIWDDISLAYLSLFC 356

Query:   352 TFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAAVNIDNEAAREALSVTGIILCL 411
             TFCVFGWNMER+GFGNMYVHIATFILFC+APF+IF LAAVNIDNE  REAL ++GI+LC+
Sbjct:   357 TFCVFGWNMERVGFGNMYVHIATFILFCLAPFFIFNLAAVNIDNETVREALGISGILLCV 416

Query:   412 FGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDXXXXXXXXXXXXAQEARTGNAYEIIED 471
             FGLLYGGFWRIQ+RKRF LP+YNFC G  AI+D            AQE RT N+YEI+ED
Sbjct:   417 FGLLYGGFWRIQMRKRFKLPSYNFCFGRAAIADCALWLCCCWCSLAQEVRTANSYEIVED 476

Query:   472 KFCR----KQMDNGDQLSPLPREDGMVQFRXXXXXXXXXXXXXXXXXIGNPPSPSRFSKE 527
             KFC+    K M + + +SPLPREDG+   R                     PSPSRF KE
Sbjct:   477 KFCQRKEEKNMVSPNLVSPLPREDGVFDPRFGLGSSPKNISGASS------PSPSRFWKE 530

Query:   528 YYSPERQLYAIEEPSAKGKDETMSPPAPSLIQRE 561
              +SP  Q    E+   K  D  ++PP+P  I RE
Sbjct:   531 AHSPNVQTPR-EKEEVKS-DVALTPPSPLSIHRE 562


>TAIR|locus:2153544 [details] [associations]
            symbol:AT5G05350 "AT5G05350" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR006461 Pfam:PF04749 TIGRFAMs:TIGR01571
            InterPro:IPR021369 Pfam:PF11204 EMBL:AY735670 IPI:IPI00540134
            RefSeq:NP_196154.1 UniGene:At.51049 EnsemblPlants:AT5G05350.1
            GeneID:830417 KEGG:ath:AT5G05350 TAIR:At5g05350
            HOGENOM:HOG000238418 InParanoid:Q5XV52 OMA:HMMVVVL PhylomeDB:Q5XV52
            ProtClustDB:CLSN2686623 Genevestigator:Q5XV52 Uniprot:Q5XV52
        Length = 526

 Score = 1602 (569.0 bits), Expect = 1.3e-164, P = 1.3e-164
 Identities = 306/479 (63%), Positives = 367/479 (76%)

Query:    21 AKNQGQIPLDISSSRKTLLSGEKPGGRSVSMFSSIPNRIRLLKFGSASNKFKQIAEQRDE 80
             +K +   P  +S+S K L+S EKP   S S    + NRI+LLKFGS S + K++AE+RDE
Sbjct:    10 SKTRVSCPPALSTSHKILISEEKPRRWSESSLPDVSNRIKLLKFGSPSARLKRMAEERDE 69

Query:    81 ISRSV-ACSSGSHGFRDRLNGVFTRKVDWVSIKKMCKEWIRNPMNMALLAWVICVAVSGA 139
             +SRSV + SS SH        V +RK++W  + KM K+W++NP+NM +  W+  VAVSGA
Sbjct:    70 VSRSVNSSSSSSHDV------VSSRKIEWACLMKMGKQWLQNPLNMVMFLWIFVVAVSGA 123

Query:   140 ILFLVLTGMLNKAIPRKSQRDVWFEVNNQILNALFTLMCLYQHPKRLYHLVLLFRWSPKD 199
             ILF+V+TGMLN A+P+KSQRDVWFEVNNQILNALFTLMCLYQHPKR YHLVLL RW   D
Sbjct:   124 ILFMVMTGMLNHALPKKSQRDVWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWKQDD 183

Query:   200 IAKLRKIYCKNGTYKPHEWAHMMVVVILLNLNCFAQYALCGLNVGYRRSDRPAIGVGICI 259
             +  LRKI+CKNGTYKP+EW HMMVVV+LL+LNCFAQYALCGLN+GYRRS+RPAIGV ICI
Sbjct:   184 VTTLRKIFCKNGTYKPNEWIHMMVVVLLLHLNCFAQYALCGLNLGYRRSERPAIGVAICI 243

Query:   260 SVAIGAPAFAGVYSMMSPLGKDYDSQRDEEAQVPITTGESVRPDQLRLKSLEKRYSFASS 319
             S AI AP  AG+Y+++SPLGKDYD Q DEE QV    GE   P   R  SLE+RYSFAS+
Sbjct:   244 SFAIAAPTAAGLYTILSPLGKDYDPQGDEENQVQ-AVGEG--PVSNRKLSLERRYSFASN 300

Query:   320 DEQKVVVNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFC 379
             D     V+ P W  G+LDIW DISLAYLSLFCTFC+FGWNMER+GFGNMYVHIATF+LFC
Sbjct:   301 D-----VSNPEWREGVLDIWEDISLAYLSLFCTFCLFGWNMERIGFGNMYVHIATFVLFC 355

Query:   380 MAPFWIFTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGH 439
             +APF+IF LAA+NIDNE  R+AL  TGI+LCLFGLLYGGFWRIQ+RKRF LP YN CCG 
Sbjct:   356 LAPFFIFNLAAINIDNEMVRDALGYTGIVLCLFGLLYGGFWRIQMRKRFKLPGYNICCGR 415

Query:   440 PAISDXXXXXXXXXXXXAQEARTGNAYEIIEDKFCRKQMDNG---DQL--SPLPREDGM 493
             PAI+D            AQE RT N+YEI+EDKFC+++ +N    D++  S LPREDG+
Sbjct:   416 PAIADCTLWLFCCWCSLAQEVRTANSYEIVEDKFCKRREENSKIDDEVVVSALPREDGV 474

 Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
 Identities = 126/240 (52%), Positives = 157/240 (65%)

Query:   326 VNQPRWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWI 385
             V+ P W  G+LDIW DISLAYLSLFCTFC+FGWNMER+GFGNMYVHIATF+LFC+APF+I
Sbjct:   302 VSNPEWREGVLDIWEDISLAYLSLFCTFCLFGWNMERIGFGNMYVHIATFVLFCLAPFFI 361

Query:   386 FTLAAVNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNLPAYNFCCGHPAISDX 445
             F LAA+NIDNE  R+AL  TGI+LCLFGLLYGGFWRIQ+RKRF LP YN CCG PAI+D 
Sbjct:   362 FNLAAINIDNEMVRDALGYTGIVLCLFGLLYGGFWRIQMRKRFKLPGYNICCGRPAIADC 421

Query:   446 XXXXXXXXXXXAQEARTGNAYEIIEDKFCRKQMDNGDQLSPLPREDGMVQFRXXXXXXXX 505
                        AQE RT N+YEI+EDKFC+++ +N    S +  +D +V           
Sbjct:   422 TLWLFCCWCSLAQEVRTANSYEIVEDKFCKRREEN----SKI--DDEVV-----VSALPR 470

Query:   506 XXXXXXXXXIGNPPSPSRFSKEYYSPERQLYAIEEPSAKGK--DETMSPPAPSLIQREYS 563
                      +    + +  +    SP RQ    ++ +  G+  DE +SPP+P  I RE S
Sbjct:   471 EDGVFDPSCLPKKMTTTMIASSTLSPSRQ----KDETCLGEKGDEALSPPSPPFIHREAS 526


>TAIR|locus:2200081 [details] [associations]
            symbol:AT1G11380 "AT1G11380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR006461 Pfam:PF04749 TIGRFAMs:TIGR01571 EMBL:AY084625
            EMBL:BT024901 IPI:IPI00523895 RefSeq:NP_563889.1 UniGene:At.42137
            EnsemblPlants:AT1G11380.1 GeneID:837680 KEGG:ath:AT1G11380
            TAIR:At1g11380 eggNOG:NOG282053 HOGENOM:HOG000070857
            InParanoid:Q8LFV5 OMA:LICPCCT PhylomeDB:Q8LFV5
            ProtClustDB:CLSN2687768 Genevestigator:Q8LFV5 Uniprot:Q8LFV5
        Length = 254

 Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
 Identities = 30/100 (30%), Positives = 52/100 (52%)

Query:   331 WSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCMAPFWIFTLAA 390
             W G ++D + D  L   S  C    FG NM R GFG+ ++  A  ++  +A F +F + A
Sbjct:    86 WEGDVMDCFEDRHLCIESACCPCYRFGKNMTRTGFGSCFLQGAVHMIL-IAGF-LFNVVA 143

Query:   391 VNIDNEAAREALSVTGIILCLFGLLYGGFWRIQLRKRFNL 430
               +        L++  ++L   G  Y GF+R+ +R++FN+
Sbjct:   144 FAVTKRHCFLYLAIAFVLL--IGS-YLGFFRMLIRRKFNI 180


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      563       534   0.00093  119 3  11 22  0.49    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  626 (67 KB)
  Total size of DFA:  334 KB (2167 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  45.49u 0.13s 45.62t   Elapsed:  00:00:02
  Total cpu time:  45.49u 0.13s 45.62t   Elapsed:  00:00:02
  Start:  Thu May  9 21:32:38 2013   End:  Thu May  9 21:32:40 2013

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