Query 008499
Match_columns 563
No_of_seqs 331 out of 2212
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 12:55:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008499.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008499hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0819 TenA Putative transcri 100.0 1E-46 2.2E-51 364.9 25.0 210 14-243 1-214 (218)
2 PRK14713 multifunctional hydro 100.0 1.2E-42 2.5E-47 383.2 26.2 217 7-247 311-528 (530)
3 PTZ00347 phosphomethylpyrimidi 100.0 2.6E-41 5.7E-46 371.0 26.7 235 10-273 7-242 (504)
4 PRK09517 multifunctional thiam 100.0 1.6E-41 3.6E-46 387.0 25.5 216 6-247 536-752 (755)
5 PF03070 TENA_THI-4: TENA/THI- 100.0 1E-40 2.2E-45 325.9 18.8 203 21-243 1-207 (210)
6 TIGR01544 HAD-SF-IE haloacid d 100.0 2.5E-27 5.5E-32 237.3 19.4 227 261-519 20-262 (277)
7 KOG2598 Phosphomethylpyrimidin 99.9 1.3E-23 2.7E-28 214.3 19.7 207 14-243 309-519 (523)
8 COG4359 Uncharacterized conser 99.9 1.3E-23 2.9E-28 192.3 15.2 204 262-532 2-214 (220)
9 COG0560 SerB Phosphoserine pho 99.9 9.1E-24 2E-28 206.2 14.8 199 261-518 3-202 (212)
10 TIGR03333 salvage_mtnX 2-hydro 99.9 3.1E-22 6.7E-27 196.3 17.0 193 265-523 1-200 (214)
11 PRK11133 serB phosphoserine ph 99.9 1.8E-21 3.8E-26 201.4 16.2 192 261-511 108-299 (322)
12 PRK09552 mtnX 2-hydroxy-3-keto 99.9 3.7E-21 8.1E-26 189.3 17.2 196 262-523 2-204 (219)
13 KOG3128 Uncharacterized conser 99.9 1.1E-21 2.4E-26 187.9 9.1 227 261-519 36-279 (298)
14 PF05822 UMPH-1: Pyrimidine 5' 99.9 1.8E-21 3.8E-26 190.6 10.5 199 307-519 15-230 (246)
15 PF06888 Put_Phosphatase: Puta 99.8 5.9E-20 1.3E-24 180.6 16.2 129 372-504 56-198 (234)
16 TIGR01488 HAD-SF-IB Haloacid D 99.8 9E-20 2E-24 172.6 12.6 171 265-495 1-177 (177)
17 TIGR01545 YfhB_g-proteo haloac 99.8 3.8E-19 8.3E-24 173.8 17.0 131 368-509 67-208 (210)
18 TIGR00338 serB phosphoserine p 99.8 5.8E-19 1.3E-23 173.3 15.7 136 370-512 68-204 (219)
19 KOG1615 Phosphoserine phosphat 99.8 1.9E-19 4.1E-24 166.7 10.5 191 262-514 15-210 (227)
20 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.8 2.8E-18 6.1E-23 166.2 16.3 132 368-506 61-201 (202)
21 TIGR02137 HSK-PSP phosphoserin 99.8 1.4E-18 3.1E-23 168.8 14.1 128 372-514 53-182 (203)
22 PRK11590 hypothetical protein; 99.7 6.6E-17 1.4E-21 158.2 15.9 128 371-509 71-209 (211)
23 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 9.2E-17 2E-21 153.2 16.5 120 373-502 58-186 (188)
24 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 1.1E-16 2.5E-21 154.3 17.3 132 373-512 66-199 (201)
25 KOG3120 Predicted haloacid deh 99.7 1.2E-16 2.6E-21 151.0 12.6 184 261-502 11-209 (256)
26 PLN02954 phosphoserine phospha 99.7 6.1E-16 1.3E-20 152.4 15.7 179 262-501 11-194 (224)
27 PRK13582 thrH phosphoserine ph 99.5 1.5E-13 3.2E-18 133.4 15.5 120 372-506 53-174 (205)
28 PF12710 HAD: haloacid dehalog 99.5 1.4E-14 3E-19 138.6 8.0 99 387-493 85-192 (192)
29 PLN02177 glycerol-3-phosphate 99.4 1E-11 2.3E-16 135.3 16.0 123 369-504 85-216 (497)
30 PRK08238 hypothetical protein; 99.1 7.5E-10 1.6E-14 120.7 15.2 115 385-522 70-185 (479)
31 PRK13222 phosphoglycolate phos 99.0 5.1E-08 1.1E-12 95.7 19.4 100 385-501 91-192 (226)
32 TIGR01428 HAD_type_II 2-haloal 98.9 1.3E-07 2.7E-12 91.3 19.1 103 381-502 86-192 (198)
33 PRK10826 2-deoxyglucose-6-phos 98.9 3.4E-08 7.3E-13 97.2 15.3 102 384-502 89-191 (222)
34 cd01427 HAD_like Haloacid deha 98.9 8E-09 1.7E-13 91.7 9.8 110 383-497 20-134 (139)
35 TIGR01449 PGP_bact 2-phosphogl 98.9 4.7E-08 1E-12 95.2 15.8 97 385-500 83-182 (213)
36 PRK13288 pyrophosphatase PpaX; 98.9 7.3E-08 1.6E-12 94.2 16.1 95 385-498 80-177 (214)
37 TIGR03351 PhnX-like phosphonat 98.8 7.7E-08 1.7E-12 94.4 15.4 97 385-499 85-186 (220)
38 PRK13226 phosphoglycolate phos 98.8 2.2E-07 4.9E-12 92.0 18.3 97 385-500 93-192 (229)
39 TIGR01454 AHBA_synth_RP 3-amin 98.8 1.2E-07 2.6E-12 92.0 16.0 98 384-500 72-172 (205)
40 PLN03243 haloacid dehalogenase 98.8 1.1E-07 2.3E-12 96.3 15.1 96 385-499 107-205 (260)
41 PRK13223 phosphoglycolate phos 98.7 4.9E-07 1.1E-11 92.0 17.3 95 385-498 99-196 (272)
42 TIGR01422 phosphonatase phosph 98.7 3.4E-07 7.4E-12 92.0 16.0 97 384-498 96-196 (253)
43 PRK11587 putative phosphatase; 98.7 3.6E-07 7.8E-12 89.7 14.9 100 384-502 80-182 (218)
44 PRK05157 pyrroloquinoline quin 98.7 3.1E-06 6.8E-11 83.7 21.2 205 8-246 6-230 (246)
45 PRK13478 phosphonoacetaldehyde 98.7 1E-06 2.2E-11 89.4 18.4 97 384-498 98-198 (267)
46 PRK13225 phosphoglycolate phos 98.7 2E-07 4.3E-12 94.9 13.2 95 384-498 139-234 (273)
47 PLN02575 haloacid dehalogenase 98.7 4E-07 8.7E-12 96.1 15.8 96 385-499 214-312 (381)
48 TIGR02253 CTE7 HAD superfamily 98.7 6.1E-07 1.3E-11 87.9 16.1 99 385-502 92-195 (221)
49 TIGR02252 DREG-2 REG-2-like, H 98.7 1.8E-06 3.8E-11 83.6 18.8 93 386-498 104-200 (203)
50 PF13419 HAD_2: Haloacid dehal 98.6 6E-07 1.3E-11 83.5 14.2 96 384-498 74-172 (176)
51 COG5424 Pyrroloquinoline quino 98.6 6.2E-06 1.4E-10 79.8 21.0 185 32-243 25-225 (242)
52 PRK14988 GMP/IMP nucleotidase; 98.6 1.1E-06 2.4E-11 86.9 16.1 98 383-499 89-189 (224)
53 PLN02770 haloacid dehalogenase 98.6 8.7E-07 1.9E-11 89.0 15.1 96 385-499 106-204 (248)
54 TIGR02009 PGMB-YQAB-SF beta-ph 98.6 6.5E-07 1.4E-11 85.1 12.9 94 385-499 86-182 (185)
55 TIGR02111 PQQ_syn_pqqC coenzym 98.6 4.3E-06 9.4E-11 82.0 18.6 185 31-246 19-223 (239)
56 PRK09456 ?-D-glucose-1-phospha 98.6 3.2E-06 6.9E-11 81.8 17.1 108 386-512 83-195 (199)
57 TIGR01990 bPGM beta-phosphoglu 98.6 1.3E-06 2.8E-11 83.0 14.0 93 385-498 85-180 (185)
58 PRK09449 dUMP phosphatase; Pro 98.6 5E-06 1.1E-10 81.7 18.6 98 385-501 93-195 (224)
59 TIGR01549 HAD-SF-IA-v1 haloaci 98.5 1.3E-06 2.8E-11 80.7 12.7 91 385-496 62-154 (154)
60 COG0546 Gph Predicted phosphat 98.5 2.4E-06 5.3E-11 84.1 15.3 93 386-497 88-183 (220)
61 PLN02940 riboflavin kinase 98.5 2.7E-06 5.9E-11 90.8 16.0 98 384-500 90-191 (382)
62 PLN02779 haloacid dehalogenase 98.4 1.6E-05 3.6E-10 81.5 19.6 102 386-501 143-244 (286)
63 PRK06698 bifunctional 5'-methy 98.4 6.8E-06 1.5E-10 89.9 16.5 92 385-498 328-422 (459)
64 PRK10563 6-phosphogluconate ph 98.4 1.3E-05 2.7E-10 78.8 15.7 98 385-501 86-184 (221)
65 TIGR01497 kdpB K+-transporting 98.3 1.8E-06 3.9E-11 97.6 9.7 109 386-526 445-554 (675)
66 TIGR02254 YjjG/YfnB HAD superf 98.3 2.8E-05 6E-10 76.1 17.0 97 385-501 95-197 (224)
67 PHA02597 30.2 hypothetical pro 98.3 9.9E-06 2.1E-10 78.1 13.6 98 384-501 71-172 (197)
68 TIGR01548 HAD-SF-IA-hyp1 haloa 98.3 2.3E-05 5E-10 75.6 15.1 88 388-495 107-197 (197)
69 TIGR01993 Pyr-5-nucltdase pyri 98.3 6.1E-05 1.3E-09 71.8 17.4 97 385-499 82-181 (184)
70 TIGR01509 HAD-SF-IA-v3 haloaci 98.2 3.6E-05 7.8E-10 72.6 15.5 91 386-498 84-179 (183)
71 PLN02499 glycerol-3-phosphate 98.2 1E-05 2.2E-10 87.3 12.7 119 368-501 70-196 (498)
72 TIGR01511 ATPase-IB1_Cu copper 98.2 3.9E-06 8.4E-11 94.1 9.9 94 385-507 403-497 (562)
73 PRK01122 potassium-transportin 98.2 4.7E-06 1E-10 94.4 9.7 108 387-526 445-553 (679)
74 TIGR02247 HAD-1A3-hyp Epoxide 98.2 4E-05 8.7E-10 74.6 14.9 104 385-508 92-202 (211)
75 PRK10725 fructose-1-P/6-phosph 98.2 3.5E-05 7.6E-10 73.4 14.1 93 385-498 86-181 (188)
76 TIGR01672 AphA HAD superfamily 98.2 2.1E-05 4.5E-10 78.3 12.3 89 386-497 113-205 (237)
77 PRK14010 potassium-transportin 98.1 5.6E-06 1.2E-10 93.7 8.7 109 386-526 440-549 (673)
78 COG2217 ZntA Cation transport 98.1 8.3E-06 1.8E-10 92.6 8.9 92 386-505 536-628 (713)
79 PLN02919 haloacid dehalogenase 98.1 0.00012 2.6E-09 87.6 18.7 97 387-502 161-262 (1057)
80 PF00702 Hydrolase: haloacid d 98.1 5E-06 1.1E-10 80.5 5.7 88 385-496 125-215 (215)
81 TIGR01524 ATPase-IIIB_Mg magne 98.0 1.5E-05 3.3E-10 93.6 9.7 111 386-506 514-632 (867)
82 PRK10748 flavin mononucleotide 98.0 0.00024 5.3E-09 70.7 17.1 92 385-501 111-207 (238)
83 COG4030 Uncharacterized protei 98.0 7.1E-05 1.5E-09 72.0 11.2 126 372-504 67-238 (315)
84 PLN02811 hydrolase 98.0 9.6E-05 2.1E-09 72.7 12.7 100 384-500 75-181 (220)
85 TIGR01512 ATPase-IB2_Cd heavy 98.0 1.8E-05 4E-10 88.2 8.5 90 385-502 360-451 (536)
86 TIGR01647 ATPase-IIIA_H plasma 98.0 1.9E-05 4.2E-10 91.5 8.7 109 386-505 441-563 (755)
87 PRK11033 zntA zinc/cadmium/mer 97.9 2.4E-05 5.2E-10 90.4 9.2 92 385-506 566-658 (741)
88 TIGR01670 YrbI-phosphatas 3-de 97.9 4.1E-05 8.9E-10 71.2 8.8 84 395-504 36-120 (154)
89 PRK10517 magnesium-transportin 97.9 2.3E-05 4.9E-10 92.3 8.7 110 386-505 549-666 (902)
90 PRK15122 magnesium-transportin 97.9 2.8E-05 6.1E-10 91.6 9.1 112 386-507 549-668 (903)
91 TIGR02726 phenyl_P_delta pheny 97.9 3.3E-05 7.1E-10 73.0 7.8 90 396-511 43-134 (169)
92 PRK11009 aphA acid phosphatase 97.9 8.8E-05 1.9E-09 73.8 10.6 89 386-497 113-205 (237)
93 TIGR01517 ATPase-IIB_Ca plasma 97.8 6.3E-05 1.4E-09 89.3 10.0 107 386-502 578-694 (941)
94 TIGR01523 ATPase-IID_K-Na pota 97.8 4.5E-05 9.7E-10 91.2 8.7 108 386-502 645-771 (1053)
95 TIGR00213 GmhB_yaeD D,D-heptos 97.8 0.00011 2.5E-09 69.6 9.7 107 385-499 24-146 (176)
96 COG0637 Predicted phosphatase/ 97.8 0.00032 6.9E-09 69.2 13.1 99 383-501 82-184 (221)
97 TIGR01525 ATPase-IB_hvy heavy 97.8 7.1E-05 1.5E-09 84.0 9.4 97 385-508 382-479 (556)
98 TIGR01522 ATPase-IIA2_Ca golgi 97.8 5.5E-05 1.2E-09 89.3 8.5 106 387-502 528-643 (884)
99 PRK10671 copA copper exporting 97.8 7.5E-05 1.6E-09 87.7 9.2 92 386-505 649-741 (834)
100 PRK09484 3-deoxy-D-manno-octul 97.7 0.00013 2.7E-09 69.9 8.5 84 396-505 57-141 (183)
101 TIGR01662 HAD-SF-IIIA HAD-supe 97.7 0.00033 7.2E-09 62.9 10.1 95 387-501 25-130 (132)
102 PRK10513 sugar phosphate phosp 97.7 5.2E-05 1.1E-09 76.8 5.2 56 455-511 192-248 (270)
103 TIGR01533 lipo_e_P4 5'-nucleot 97.7 0.00094 2E-08 67.6 14.1 114 385-523 116-234 (266)
104 PRK10976 putative hydrolase; P 97.6 6.6E-05 1.4E-09 75.9 5.3 57 455-512 186-243 (266)
105 KOG0207 Cation transport ATPas 97.6 0.00023 4.9E-09 80.8 9.7 93 386-505 722-814 (951)
106 TIGR01116 ATPase-IIA1_Ca sarco 97.6 0.0002 4.3E-09 84.9 9.7 109 386-505 536-659 (917)
107 TIGR01656 Histidinol-ppas hist 97.6 0.00034 7.3E-09 64.4 9.1 101 387-501 27-144 (147)
108 TIGR01493 HAD-SF-IA-v2 Haloaci 97.6 0.00053 1.2E-08 64.5 10.6 86 383-494 86-174 (175)
109 COG4087 Soluble P-type ATPase 97.6 0.0002 4.3E-09 63.3 6.6 89 387-502 30-119 (152)
110 PRK05446 imidazole glycerol-ph 97.5 9.2E-05 2E-09 77.8 4.8 111 386-502 29-148 (354)
111 PF08282 Hydrolase_3: haloacid 97.5 0.00015 3.3E-09 71.4 5.9 57 455-512 182-239 (254)
112 COG0561 Cof Predicted hydrolas 97.5 0.00018 4E-09 72.6 6.2 57 455-512 185-242 (264)
113 PRK15126 thiamin pyrimidine py 97.5 0.00011 2.3E-09 74.7 4.4 78 455-535 184-264 (272)
114 smart00775 LNS2 LNS2 domain. T 97.4 0.0011 2.3E-08 61.9 10.4 103 388-497 28-140 (157)
115 TIGR01106 ATPase-IIC_X-K sodiu 97.4 0.00025 5.5E-09 84.7 7.7 108 386-502 567-709 (997)
116 TIGR01261 hisB_Nterm histidino 97.4 0.00085 1.8E-08 62.9 9.1 103 386-502 28-147 (161)
117 TIGR01482 SPP-subfamily Sucros 97.4 0.00018 3.9E-09 70.6 4.6 55 456-511 146-201 (225)
118 PRK01158 phosphoglycolate phos 97.3 0.00024 5.1E-09 70.0 5.0 55 456-511 154-209 (230)
119 TIGR01487 SPP-like sucrose-pho 97.3 0.00022 4.7E-09 69.8 4.6 55 456-511 144-199 (215)
120 COG0474 MgtA Cation transport 97.3 0.00042 9.2E-09 82.0 7.3 108 385-503 545-665 (917)
121 PRK08942 D,D-heptose 1,7-bisph 97.3 0.0012 2.7E-08 62.7 9.3 101 386-500 28-144 (181)
122 PLN02887 hydrolase family prot 97.3 0.00027 5.8E-09 79.1 5.1 56 455-511 503-559 (580)
123 PRK10530 pyridoxal phosphate ( 97.3 0.00027 5.8E-09 71.5 4.7 53 456-509 196-249 (272)
124 TIGR01691 enolase-ppase 2,3-di 97.2 0.0014 3E-08 64.6 9.2 99 385-500 93-193 (220)
125 PRK12702 mannosyl-3-phosphogly 97.2 0.00041 8.8E-09 70.5 5.5 58 445-502 191-252 (302)
126 PRK03669 mannosyl-3-phosphogly 97.2 0.00031 6.7E-09 71.4 4.6 47 455-502 183-232 (271)
127 TIGR01494 ATPase_P-type ATPase 97.2 0.00077 1.7E-08 74.7 7.8 87 386-502 346-432 (499)
128 CHL00168 pbsA heme oxygenase; 97.2 0.1 2.2E-06 51.9 21.7 192 15-243 4-207 (238)
129 TIGR01657 P-ATPase-V P-type AT 97.2 0.00095 2.1E-08 80.3 8.6 45 455-504 785-829 (1054)
130 COG1011 Predicted hydrolase (H 97.1 0.018 3.8E-07 56.4 16.0 97 385-503 97-200 (229)
131 TIGR02471 sucr_syn_bact_C sucr 97.1 0.00053 1.1E-08 68.1 5.1 58 455-513 155-213 (236)
132 smart00577 CPDc catalytic doma 97.1 0.00042 9E-09 63.9 3.9 92 385-501 43-138 (148)
133 TIGR01486 HAD-SF-IIB-MPGP mann 97.1 0.00054 1.2E-08 69.0 4.4 49 456-504 173-222 (256)
134 KOG0202 Ca2+ transporting ATPa 97.1 0.0019 4E-08 73.0 8.8 106 386-505 583-707 (972)
135 TIGR02463 MPGP_rel mannosyl-3- 97.0 0.00077 1.7E-08 66.1 5.1 45 456-501 176-220 (221)
136 cd00232 HemeO Heme oxygenase c 97.0 0.14 3.1E-06 49.5 20.2 186 16-237 2-196 (203)
137 PRK06769 hypothetical protein; 97.0 0.0043 9.4E-08 58.7 9.2 101 386-502 27-137 (173)
138 TIGR01664 DNA-3'-Pase DNA 3'-p 96.9 0.0041 8.8E-08 58.6 8.9 92 388-498 43-157 (166)
139 TIGR00099 Cof-subfamily Cof su 96.9 0.00094 2E-08 67.1 4.8 56 455-511 184-240 (256)
140 TIGR01668 YqeG_hyp_ppase HAD s 96.9 0.0057 1.2E-07 57.7 9.3 92 385-502 41-136 (170)
141 COG2216 KdpB High-affinity K+ 96.9 0.0018 3.8E-08 69.5 6.2 109 387-528 447-557 (681)
142 PLN02382 probable sucrose-phos 96.8 0.0017 3.6E-08 70.1 6.0 57 455-512 171-232 (413)
143 TIGR02461 osmo_MPG_phos mannos 96.8 0.0015 3.3E-08 64.6 4.7 47 456-502 178-225 (225)
144 PF08235 LNS2: LNS2 (Lipin/Ned 96.7 0.0056 1.2E-07 56.8 7.8 106 387-497 27-140 (157)
145 TIGR01685 MDP-1 magnesium-depe 96.7 0.012 2.6E-07 55.8 9.9 109 383-502 41-156 (174)
146 PLN03190 aminophospholipid tra 96.7 0.0047 1E-07 74.7 8.8 46 455-504 854-899 (1178)
147 TIGR01652 ATPase-Plipid phosph 96.7 0.0051 1.1E-07 74.2 9.2 46 455-504 751-796 (1057)
148 PRK00192 mannosyl-3-phosphogly 96.6 0.0025 5.4E-08 64.8 5.1 51 456-508 188-240 (273)
149 TIGR01485 SPP_plant-cyano sucr 96.6 0.0051 1.1E-07 61.6 7.2 56 456-512 164-221 (249)
150 COG1778 Low specificity phosph 96.6 0.005 1.1E-07 56.4 6.2 89 397-511 45-135 (170)
151 PF06941 NT5C: 5' nucleotidase 96.5 0.02 4.3E-07 55.0 10.6 117 384-561 70-186 (191)
152 TIGR01681 HAD-SF-IIIC HAD-supe 96.5 0.0076 1.7E-07 54.1 7.0 92 387-493 29-125 (128)
153 PHA02530 pseT polynucleotide k 96.4 0.012 2.5E-07 60.6 8.6 105 386-501 186-294 (300)
154 PF05116 S6PP: Sucrose-6F-phos 96.4 0.0074 1.6E-07 60.6 6.8 48 456-504 162-209 (247)
155 TIGR01484 HAD-SF-IIB HAD-super 96.1 0.005 1.1E-07 59.5 3.7 45 456-501 160-204 (204)
156 PRK14502 bifunctional mannosyl 96.0 0.0082 1.8E-07 67.7 5.3 48 456-504 610-659 (694)
157 KOG3085 Predicted hydrolase (H 96.0 0.28 6.1E-06 48.7 15.4 100 385-504 111-215 (237)
158 PF11019 DUF2608: Protein of u 95.9 0.1 2.2E-06 52.6 12.3 112 379-495 73-197 (252)
159 PRK10187 trehalose-6-phosphate 95.8 0.0086 1.9E-07 60.8 4.1 49 456-505 171-223 (266)
160 KOG0204 Calcium transporting A 95.4 0.047 1E-06 62.1 8.4 126 385-523 645-782 (1034)
161 PTZ00174 phosphomannomutase; P 95.3 0.021 4.4E-07 57.3 4.8 54 455-513 184-243 (247)
162 COG0241 HisB Histidinol phosph 95.3 0.13 2.7E-06 49.0 9.5 109 386-501 30-148 (181)
163 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.1 0.13 2.9E-06 51.2 9.8 87 385-495 22-114 (242)
164 KOG0210 P-type ATPase [Inorgan 95.0 0.05 1.1E-06 60.5 6.7 112 386-516 710-822 (1051)
165 PF12981 DUF3865: Domain of Un 94.9 0.24 5.3E-06 47.7 10.1 202 16-242 4-225 (231)
166 TIGR01686 FkbH FkbH-like domai 94.7 0.17 3.8E-06 52.7 9.9 106 388-512 32-140 (320)
167 PF01126 Heme_oxygenase: Heme 94.6 2.4 5.2E-05 40.9 16.9 107 14-131 1-112 (205)
168 TIGR01663 PNK-3'Pase polynucle 94.3 0.29 6.3E-06 54.4 10.7 115 388-523 198-330 (526)
169 PLN02423 phosphomannomutase 94.2 0.067 1.5E-06 53.6 5.2 53 455-513 185-242 (245)
170 COG2503 Predicted secreted aci 94.1 0.24 5.3E-06 48.8 8.5 113 385-522 120-237 (274)
171 KOG2914 Predicted haloacid-hal 94.1 1.8 4E-05 42.6 14.8 105 383-504 88-197 (222)
172 PF03767 Acid_phosphat_B: HAD 93.4 0.25 5.5E-06 49.0 7.4 89 387-491 115-207 (229)
173 TIGR01675 plant-AP plant acid 93.4 0.91 2E-05 45.0 11.2 88 385-490 118-210 (229)
174 TIGR02251 HIF-SF_euk Dullard-l 93.1 0.038 8.3E-07 51.7 1.2 38 385-427 40-77 (162)
175 PLN02580 trehalose-phosphatase 92.8 0.29 6.4E-06 52.1 7.4 47 456-502 298-351 (384)
176 TIGR00685 T6PP trehalose-phosp 92.7 0.15 3.2E-06 51.0 4.7 39 456-495 164-202 (244)
177 COG5398 Heme oxygenase [Inorga 92.4 10 0.00022 36.8 16.2 190 17-240 4-201 (238)
178 KOG0206 P-type ATPase [General 91.8 0.12 2.5E-06 61.8 3.1 45 457-505 779-823 (1151)
179 COG3700 AphA Acid phosphatase 91.1 0.96 2.1E-05 42.6 7.7 85 393-501 120-210 (237)
180 KOG3109 Haloacid dehalogenase- 90.9 7.5 0.00016 38.1 13.8 112 375-502 82-205 (244)
181 PF13242 Hydrolase_like: HAD-h 90.9 0.6 1.3E-05 37.4 5.6 42 461-503 7-50 (75)
182 PRK14501 putative bifunctional 89.5 0.31 6.7E-06 56.7 3.8 47 456-505 654-703 (726)
183 COG3769 Predicted hydrolase (H 89.2 0.37 8E-06 46.9 3.4 44 459-502 191-235 (274)
184 KOG0203 Na+/K+ ATPase, alpha s 86.2 0.42 9E-06 54.7 2.1 28 478-505 707-735 (1019)
185 PF12689 Acid_PPase: Acid Phos 85.7 4.8 0.0001 38.0 8.7 108 381-501 39-149 (169)
186 TIGR01680 Veg_Stor_Prot vegeta 85.2 8.9 0.00019 39.0 10.8 28 385-415 143-170 (275)
187 TIGR01684 viral_ppase viral ph 85.2 1.7 3.6E-05 44.6 5.7 50 385-438 143-196 (301)
188 KOG0208 Cation transport ATPas 84.7 0.8 1.7E-05 53.3 3.5 42 456-502 837-878 (1140)
189 COG2179 Predicted hydrolase of 84.5 7.6 0.00017 36.4 9.1 90 386-501 45-137 (175)
190 TIGR01459 HAD-SF-IIA-hyp4 HAD- 84.3 3.4 7.4E-05 41.0 7.5 38 461-498 198-236 (242)
191 TIGR02244 HAD-IG-Ncltidse HAD 84.2 4.4 9.6E-05 42.6 8.6 110 385-503 182-324 (343)
192 KOG0209 P-type ATPase [Inorgan 83.7 0.97 2.1E-05 51.7 3.5 41 459-504 794-834 (1160)
193 PHA03398 viral phosphatase sup 83.4 2.2 4.7E-05 43.8 5.7 50 385-438 145-198 (303)
194 PLN02205 alpha,alpha-trehalose 82.2 1.2 2.7E-05 52.5 3.9 40 456-496 759-801 (854)
195 PTZ00445 p36-lilke protein; Pr 79.9 9.9 0.00021 37.2 8.5 108 387-502 75-205 (219)
196 PLN02645 phosphoglycolate phos 79.4 5.8 0.00012 41.2 7.4 84 388-497 45-132 (311)
197 PLN02588 glycerol-3-phosphate 78.6 10 0.00022 41.8 9.0 124 368-503 108-239 (525)
198 PLN03017 trehalose-phosphatase 73.1 4.2 9.1E-05 43.1 4.2 47 456-502 280-333 (366)
199 KOG2116 Protein involved in pl 72.6 1.9 4.2E-05 48.1 1.6 23 262-284 529-551 (738)
200 TIGR02245 HAD_IIID1 HAD-superf 72.0 14 0.00031 35.7 7.3 37 386-427 44-80 (195)
201 PF08645 PNK3P: Polynucleotide 70.7 11 0.00023 35.2 6.0 24 388-414 30-53 (159)
202 COG5083 SMP2 Uncharacterized p 70.1 3.3 7.2E-05 44.2 2.6 26 262-287 374-399 (580)
203 TIGR01458 HAD-SF-IIA-hyp3 HAD- 68.5 5.8 0.00013 39.9 4.0 42 460-502 181-224 (257)
204 PLN02151 trehalose-phosphatase 68.2 6.2 0.00013 41.7 4.2 47 456-502 266-319 (354)
205 PF03031 NIF: NLI interacting 67.7 5.1 0.00011 36.8 3.2 38 385-427 34-71 (159)
206 TIGR00685 T6PP trehalose-phosp 67.3 2.8 6.1E-05 41.8 1.4 15 262-276 2-16 (244)
207 KOG0205 Plasma membrane H+-tra 66.9 4.4 9.6E-05 45.5 2.9 44 456-504 569-612 (942)
208 PF13344 Hydrolase_6: Haloacid 64.0 9 0.0002 32.7 3.7 26 387-415 14-39 (101)
209 PRK10444 UMP phosphatase; Prov 62.8 12 0.00027 37.4 5.1 45 457-502 173-219 (248)
210 PRK10187 trehalose-6-phosphate 62.1 5.7 0.00012 40.2 2.6 15 262-276 13-27 (266)
211 PLN02580 trehalose-phosphatase 62.1 4.1 8.8E-05 43.6 1.5 16 261-276 117-132 (384)
212 PF14518 Haem_oxygenas_2: Iron 62.0 43 0.00094 28.4 7.7 63 96-176 20-90 (106)
213 COG1458 Predicted DNA-binding 61.8 7 0.00015 37.3 2.8 42 481-522 157-200 (221)
214 PF09949 DUF2183: Uncharacteri 59.9 31 0.00068 29.5 6.3 75 408-490 1-79 (100)
215 COG4229 Predicted enolase-phos 58.4 55 0.0012 31.3 8.0 97 385-498 101-199 (229)
216 PLN02151 trehalose-phosphatase 57.7 5.5 0.00012 42.1 1.6 16 261-276 96-111 (354)
217 TIGR01460 HAD-SF-IIA Haloacid 57.5 16 0.00034 36.2 4.8 42 457-499 187-230 (236)
218 COG1877 OtsB Trehalose-6-phosp 56.9 5.8 0.00012 40.3 1.5 16 260-275 15-30 (266)
219 PLN03017 trehalose-phosphatase 56.5 6 0.00013 42.0 1.6 15 261-275 109-123 (366)
220 TIGR01457 HAD-SF-IIA-hyp2 HAD- 54.8 21 0.00046 35.6 5.2 42 460-502 180-223 (249)
221 TIGR01485 SPP_plant-cyano sucr 54.3 6.6 0.00014 39.1 1.4 14 263-276 1-14 (249)
222 PRK09484 3-deoxy-D-manno-octul 54.0 6.7 0.00015 37.3 1.4 17 261-277 19-35 (183)
223 TIGR02250 FCP1_euk FCP1-like p 53.9 13 0.00029 34.4 3.3 38 385-427 56-93 (156)
224 PF05116 S6PP: Sucrose-6F-phos 53.6 6.6 0.00014 39.3 1.3 14 262-275 1-14 (247)
225 PLN02423 phosphomannomutase 52.8 7.5 0.00016 38.8 1.6 18 261-278 5-22 (245)
226 PLN02645 phosphoglycolate phos 52.0 21 0.00045 37.0 4.7 40 461-501 233-274 (311)
227 PRK07878 molybdopterin biosynt 51.8 1.6E+02 0.0034 31.7 11.6 136 374-519 15-161 (392)
228 PRK05690 molybdopterin biosynt 49.7 2.5E+02 0.0055 27.9 12.0 138 374-520 5-152 (245)
229 PRK08762 molybdopterin biosynt 49.7 1.6E+02 0.0035 31.4 11.2 110 407-520 136-255 (376)
230 TIGR01452 PGP_euk phosphoglyco 49.4 23 0.0005 36.0 4.5 39 462-501 206-246 (279)
231 PRK14501 putative bifunctional 47.1 8.3 0.00018 44.9 1.0 17 261-277 490-506 (726)
232 PF02358 Trehalose_PPase: Treh 45.9 15 0.00033 36.2 2.5 47 457-503 163-217 (235)
233 PF00702 Hydrolase: haloacid d 45.0 9.8 0.00021 36.2 1.0 14 265-278 3-16 (215)
234 PLN03063 alpha,alpha-trehalose 44.9 20 0.00043 42.3 3.6 42 455-496 674-721 (797)
235 TIGR02471 sucr_syn_bact_C sucr 44.4 8.8 0.00019 37.8 0.5 14 265-278 1-14 (236)
236 TIGR01689 EcbF-BcbF capsule bi 43.6 12 0.00026 33.6 1.2 14 265-278 3-16 (126)
237 PLN02205 alpha,alpha-trehalose 42.7 26 0.00056 41.7 4.1 18 261-278 594-611 (854)
238 PLN03064 alpha,alpha-trehalose 41.0 20 0.00043 42.9 2.8 40 455-494 764-809 (934)
239 PF08745 UPF0278: UPF0278 fami 39.0 16 0.00034 35.3 1.3 42 481-522 150-193 (205)
240 PF05761 5_nucleotid: 5' nucle 38.9 13 0.00028 40.7 0.8 38 386-427 182-219 (448)
241 TIGR01681 HAD-SF-IIIC HAD-supe 38.7 15 0.00033 32.6 1.1 14 265-278 2-15 (128)
242 PLN02382 probable sucrose-phos 38.0 20 0.00044 38.8 2.1 16 262-277 8-23 (413)
243 KOG4175 Tryptophan synthase al 37.8 3.1E+02 0.0066 26.8 9.6 130 390-523 3-156 (268)
244 PF08645 PNK3P: Polynucleotide 37.2 17 0.00037 33.8 1.2 13 265-277 2-14 (159)
245 PRK14502 bifunctional mannosyl 36.6 34 0.00074 39.3 3.7 18 262-279 415-432 (694)
246 TIGR02726 phenyl_P_delta pheny 36.0 18 0.0004 34.0 1.2 16 262-277 6-21 (169)
247 PTZ00174 phosphomannomutase; P 35.4 20 0.00043 35.7 1.5 16 263-278 5-20 (247)
248 TIGR03875 RNA_lig_partner RNA 35.0 36 0.00077 33.0 3.0 39 482-520 154-194 (206)
249 PRK07411 hypothetical protein; 34.8 5.2E+02 0.011 27.7 12.3 136 374-519 11-157 (390)
250 PTZ00465 rhoptry-associated pr 34.8 6.4E+02 0.014 27.9 12.5 57 9-65 141-205 (565)
251 TIGR01662 HAD-SF-IIIA HAD-supe 34.0 21 0.00046 31.4 1.3 12 265-276 2-13 (132)
252 cd01410 SIRT7 SIRT7: Eukaryoti 34.0 3.2E+02 0.007 26.4 9.6 47 476-522 131-189 (206)
253 PF00899 ThiF: ThiF family; I 33.7 3.3E+02 0.0072 23.9 9.6 111 407-521 3-123 (135)
254 TIGR01656 Histidinol-ppas hist 33.3 22 0.00048 32.2 1.3 14 265-278 2-15 (147)
255 TIGR01684 viral_ppase viral ph 33.2 25 0.00055 36.2 1.8 20 258-277 121-140 (301)
256 PRK05600 thiamine biosynthesis 32.9 4.4E+02 0.0096 28.1 11.3 138 373-519 13-160 (370)
257 cd01483 E1_enzyme_family Super 32.3 3.4E+02 0.0074 24.1 9.0 63 456-522 50-121 (143)
258 PRK04358 hypothetical protein; 31.8 39 0.00085 33.0 2.7 40 482-521 158-199 (217)
259 TIGR01664 DNA-3'-Pase DNA 3'-p 31.8 30 0.00065 32.3 2.0 21 257-277 7-27 (166)
260 PF06506 PrpR_N: Propionate ca 31.6 4.3E+02 0.0093 24.6 9.9 59 461-526 92-154 (176)
261 COG2099 CobK Precorrin-6x redu 31.5 1E+02 0.0022 31.0 5.7 53 494-560 72-124 (257)
262 TIGR02468 sucrsPsyn_pln sucros 30.3 1.1E+02 0.0024 37.2 6.6 47 455-502 952-1001(1050)
263 TIGR01670 YrbI-phosphatas 3-de 30.1 26 0.00057 32.1 1.2 14 264-277 2-15 (154)
264 COG4850 Uncharacterized conser 29.9 1.2E+02 0.0026 31.7 5.9 98 385-494 194-296 (373)
265 PF12683 DUF3798: Protein of u 29.3 79 0.0017 32.1 4.5 78 461-545 76-199 (275)
266 PRK05597 molybdopterin biosynt 28.2 6.7E+02 0.015 26.4 11.7 109 407-519 29-147 (355)
267 PRK15052 D-tagatose-1,6-bispho 27.5 1.1E+02 0.0025 32.9 5.5 84 393-488 2-91 (421)
268 PRK15174 Vi polysaccharide exp 27.5 2.7E+02 0.0057 32.1 9.1 118 393-523 468-592 (656)
269 COG0794 GutQ Predicted sugar p 27.1 1E+02 0.0022 30.0 4.7 48 476-523 65-121 (202)
270 PF09419 PGP_phosphatase: Mito 26.9 3.3E+02 0.0073 25.6 8.0 28 475-502 135-164 (168)
271 TIGR00099 Cof-subfamily Cof su 26.7 1.2E+02 0.0027 29.9 5.5 48 388-439 17-65 (256)
272 PRK10444 UMP phosphatase; Prov 25.6 78 0.0017 31.6 3.8 26 387-415 17-42 (248)
273 PHA03398 viral phosphatase sup 25.4 34 0.00074 35.3 1.2 17 261-277 126-142 (303)
274 TIGR01487 SPP-like sucrose-pho 25.3 1.3E+02 0.0028 28.9 5.2 48 388-439 19-67 (215)
275 TIGR02463 MPGP_rel mannosyl-3- 25.3 1.4E+02 0.0031 28.6 5.6 44 392-439 21-66 (221)
276 cd01491 Ube1_repeat1 Ubiquitin 24.6 5.9E+02 0.013 26.1 10.0 110 407-521 20-136 (286)
277 TIGR02355 moeB molybdopterin s 24.3 4.5E+02 0.0098 26.0 9.0 110 407-520 25-144 (240)
278 TIGR01457 HAD-SF-IIA-hyp2 HAD- 24.0 1.2E+02 0.0026 30.2 4.8 37 390-429 20-59 (249)
279 TIGR02461 osmo_MPG_phos mannos 23.4 1.4E+02 0.0031 29.1 5.2 46 391-440 19-65 (225)
280 COG5663 Uncharacterized conser 23.2 29 0.00063 32.6 0.2 19 262-280 5-23 (194)
281 PRK15116 sulfur acceptor prote 22.9 6.5E+02 0.014 25.6 9.9 108 407-519 31-150 (268)
282 PRK15458 tagatose 6-phosphate 22.8 1.8E+02 0.004 31.5 6.0 83 394-488 6-94 (426)
283 COG0561 Cof Predicted hydrolas 22.6 4.4E+02 0.0096 26.0 8.7 45 389-437 22-67 (264)
284 TIGR01458 HAD-SF-IIA-hyp3 HAD- 22.6 97 0.0021 31.0 3.9 25 388-415 22-46 (257)
285 PRK08942 D,D-heptose 1,7-bisph 22.5 48 0.001 31.0 1.5 16 262-277 2-17 (181)
286 PF10087 DUF2325: Uncharacteri 22.2 3.9E+02 0.0084 22.2 6.9 60 459-522 10-82 (97)
287 PRK00192 mannosyl-3-phosphogly 22.1 1.7E+02 0.0038 29.3 5.6 46 390-439 24-70 (273)
288 PRK13689 hypothetical protein; 22.0 2.7E+02 0.0059 22.5 5.3 43 193-235 6-67 (75)
289 TIGR02810 agaZ_gatZ D-tagatose 22.0 1.8E+02 0.0038 31.5 5.7 74 407-488 11-90 (420)
290 COG1778 Low specificity phosph 21.6 48 0.001 30.9 1.3 14 264-277 9-22 (170)
291 PF03332 PMM: Eukaryotic phosp 21.5 58 0.0013 32.0 1.9 53 456-512 159-216 (220)
292 PF02609 Exonuc_VII_S: Exonucl 21.3 2.1E+02 0.0044 21.3 4.4 35 199-235 1-35 (53)
293 PF05974 DUF892: Domain of unk 21.0 6.6E+02 0.014 23.1 9.4 77 52-130 7-84 (159)
294 PF06014 DUF910: Bacterial pro 20.7 38 0.00083 26.4 0.3 26 464-494 7-32 (62)
295 TIGR00213 GmhB_yaeD D,D-heptos 20.7 54 0.0012 30.6 1.5 13 264-276 2-14 (176)
No 1
>COG0819 TenA Putative transcription activator [Transcription]
Probab=100.00 E-value=1e-46 Score=364.87 Aligned_cols=210 Identities=30% Similarity=0.472 Sum_probs=195.4
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVL- 92 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~- 92 (563)
+.|++.||+..++.|...++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++.+.+..+...+..+.
T Consensus 1 ~~f~~~L~~~~~~~W~~~~~H~FV~~L~~GtL~~~~F~~YL~QDy~YL~~~~ra~~~~~~ka~~~~~~~~~~~~~~~~~~ 80 (218)
T COG0819 1 MMFSEELIRAAQPIWQKYIEHPFVQELADGTLPREKFQFYLVQDYLYLVNFARALALLASKAPDLELMEELAKIIQFLVE 80 (218)
T ss_pred CchHHHHHHHhHHHHHHHcCCHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999888887777665
Q ss_pred HHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 93 EELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 93 ~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
.|+.+|+++++++||+.++ ..+++|+|.+|++||++++. |+ ++++++||+||+|+|++
T Consensus 81 ~E~~~h~~~~~~lgis~~~~~~~~~~~~~~aYt~ym~~~~~~g~-------------------~~~~~aAl~PC~~~Y~e 141 (218)
T COG0819 81 GEMELHERLAEELGISLDELLKTEPSPANKAYTRYLLDTAYSGS-------------------FAELLAALLPCLWGYAE 141 (218)
T ss_pred HHHHHHHHHHHHhCCCHHHHHhcCCCchHHHHHHHHHHHHhcCC-------------------HHHHHHHHHHHHHHHHH
Confidence 5999999999999999742 57899999999999999996 54 36899999999999999
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
||+++..... ..++++|++||++|+|++|.+.|.+++++||+++...+++++++|.++|.+++++|.+||++|
T Consensus 142 ig~~~~~~~~-~~~~~~Y~~Wi~~Y~s~ef~~~v~~~~~~ld~~~~~~~~~~~~~l~~iF~~ss~~E~~Fwd~a 214 (218)
T COG0819 142 IGKRLKAKPR-ASPNPPYQEWIDTYASEEFQEAVEELEALLDSLAENSSEEELEKLKQIFLTASRFELAFWDMA 214 (218)
T ss_pred HHHHHHhccc-cCCCCcHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988653 347899999999999999999999999999999999999999999999999999999999999
No 2
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional
Probab=100.00 E-value=1.2e-42 Score=383.21 Aligned_cols=217 Identities=27% Similarity=0.429 Sum_probs=195.5
Q ss_pred CCCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Q 008499 7 KSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISE 86 (563)
Q Consensus 7 ~~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~ 86 (563)
+..+..+++|+++||+...+.|..+++||||++|++||||.++|++||+||++||.+|+|+++++++|+++.+++.++..
T Consensus 311 ~~~~~~~~~fs~~L~~~~~~~w~~~~~HpFv~~L~~GtL~~~~F~~Yl~QD~~yL~~~~r~~a~~~aka~~~e~~~~~~~ 390 (530)
T PRK14713 311 DAVVGPAGPFTAALWQASGPIREAIEDLPFVRALADGTLPEEAFEFYLAQDALYLNGYSRALARLAALAPDPAEQVFWAQ 390 (530)
T ss_pred cccCCCCccHHHHHHHhhHHHHHHHHcChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 33444678999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHH-HHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHH
Q 008499 87 LRKGV-LEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMR 165 (563)
Q Consensus 87 ~~~~i-~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~ 165 (563)
.+..+ .+|+++|+.++++||++ .+++|+|++|++||+++++.+. ++++++||+||+|
T Consensus 391 ~~~~~~~~E~~~h~~~~~~~~~~----~~~~p~~~aY~~~l~~~a~~~~------------------~~~~l~AllPC~~ 448 (530)
T PRK14713 391 SAQACLEVESELHRSWLGDRDAD----TAPSPVTLAYTDFLLARAAGGS------------------YAVGAAAVLPCFW 448 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcc----CCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHhHHH
Confidence 76655 57999999999999873 6789999999999999986332 3689999999999
Q ss_pred HHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 008499 166 LYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPL 245 (563)
Q Consensus 166 ~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~ 245 (563)
+|.+||+++.... ...++|+|++||++|++++|.+++.++++++|+++..++++++++|+++|+++|+||++|||+| +
T Consensus 449 ~Y~~ig~~l~~~~-~~~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~~~~~F~~a~~~E~~Fwd~A-~ 526 (530)
T PRK14713 449 LYAEVGAELHARA-GNPDDHPYAEWLQTYADPEFAAATRRAIAFVDRAFRAASPAERAAMARAFLTACRYELEFFDQA-R 526 (530)
T ss_pred HHHHHHHHHHhhc-cCCCCChHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 9999999987531 1225789999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CC
Q 008499 246 AQ 247 (563)
Q Consensus 246 ~~ 247 (563)
++
T Consensus 527 ~~ 528 (530)
T PRK14713 527 RR 528 (530)
T ss_pred cc
Confidence 54
No 3
>PTZ00347 phosphomethylpyrimidine kinase; Provisional
Probab=100.00 E-value=2.6e-41 Score=371.04 Aligned_cols=235 Identities=29% Similarity=0.464 Sum_probs=197.4
Q ss_pred CCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Q 008499 10 SPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK 89 (563)
Q Consensus 10 ~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~ 89 (563)
+++..+|+++||+++.+.|..+++||||++|++||||+++|++||+||++||.+|+|+++++++|+++.+++..+...+.
T Consensus 7 ~~~~~~fs~~L~~~~~~~~~~~~~HpFv~~l~~GtL~~~~F~~Yl~QD~~Yl~~~~r~~a~~~~ka~~~~~~~~~~~~~~ 86 (504)
T PTZ00347 7 EPVFGGLSEALWKENQDLAMMSLHLPFVQGLGDGTLDQNAFRTYIAQDTLYLNGYIRILSYCITKSDVTATGGGLLELLK 86 (504)
T ss_pred CCCCCCHHHHHHHhHHHHHHHHhCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999999999999999998888887776
Q ss_pred HHH-HHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH
Q 008499 90 GVL-EELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA 168 (563)
Q Consensus 90 ~i~-~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~ 168 (563)
.+. +|..+|+++++. .+..+++|+|++|++||++++..+.++ ++++++||+||+|+|.
T Consensus 87 ~~~~~e~~~h~~~~~~-----~~~~~~~p~~~aY~~~l~~~a~~g~~~----------------~~~~l~Al~pC~~~Y~ 145 (504)
T PTZ00347 87 GVLEELKNCHHHYIDN-----PDAAGPEAACRKYVDFLLASGNADTLG----------------PSVVIAAVIPCARLYA 145 (504)
T ss_pred HHHHHHHHHHHHHHhh-----hhccCCCHHHHHHHHHHHHHHhcCCcc----------------hHHHHHHHHHHHHHHH
Confidence 665 577899999632 134678999999999999999643321 2689999999999999
Q ss_pred HHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008499 169 FLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLAQP 248 (563)
Q Consensus 169 ~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~~~ 248 (563)
+||+++..... ..++|+|++||++|++++|.+++.++++++|+++. ++++++++++|+++|++|++||++| +++.
T Consensus 146 ~ig~~l~~~~~-~~~~~~y~~Wi~~y~~~~f~~~~~~~~~~ld~~~~---~~~~~~~~~~F~~~~~~E~~Fw~~A-y~~~ 220 (504)
T PTZ00347 146 WVGQELTNEVE-LTESHPFRRWLLSYSDEPINTSVEQLESLLDKYIR---PGEFSEVAQAYRRAMELEYDFFDSF-GYCL 220 (504)
T ss_pred HHHHHHHhccC-CCCCChHHHHHHhcCCHHHHHHHHHHHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHhHhH-Hhhh
Confidence 99999876332 12568999999999999999999999999999963 4788899999999999999999999 6554
Q ss_pred cccccccCCCCCCCCeEEeeccccc
Q 008499 249 TVVPLIKGHNPAGDRLIIFSDFDLT 273 (563)
Q Consensus 249 ~~~p~~~~~~~~~~~~~ii~DFD~T 273 (563)
-||...... .+..+.|.=.|-+
T Consensus 221 -~w~~~~~~~--~~~vLtIag~D~s 242 (504)
T PTZ00347 221 -GRPVENPMK--IPTVLTVSGSDSG 242 (504)
T ss_pred -cccccCCCC--CCeEEEEeCcCCC
Confidence 378655332 2344555544443
No 4
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional
Probab=100.00 E-value=1.6e-41 Score=386.96 Aligned_cols=216 Identities=24% Similarity=0.351 Sum_probs=194.6
Q ss_pred CCCCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Q 008499 6 PKSPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSIS 85 (563)
Q Consensus 6 ~~~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~ 85 (563)
++....++.+|+++||+...+.|...++||||++|++||||.++|++||+|||+||.+|+|+++++++|+++.+++.++.
T Consensus 536 ~~~~~~~~~~f~~~L~~~~~~~w~~~~~HPFv~~L~~GtL~~e~F~~YL~QD~~YL~~yar~~a~~~aka~~~~~~~~~~ 615 (755)
T PRK09517 536 PAPRIEPAGPFTRALWEASGDIIAEINDSDFIRMLGDGTLRRPEFDFYIDQDAQYLRQYSRALARLSSIAPDSHAQVEWA 615 (755)
T ss_pred cccccCCCCChHHHHHHHhHHHHHHHhcChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 34455566789999999999999999999999999999999999999999999999999999999999999988877777
Q ss_pred HHHH-HHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHH
Q 008499 86 ELRK-GVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCM 164 (563)
Q Consensus 86 ~~~~-~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~ 164 (563)
..+. .+..|+++|+++++++|++ .+++|+|++|++||+++++.+. ++++++||+||+
T Consensus 616 ~~~~~~~~~E~~~h~~~~~~~~~~----~~~~p~~~aYt~~l~~~a~~g~------------------~~~~laAllPC~ 673 (755)
T PRK09517 616 QSAAECIVVEAELHRSYLSGKEAP----SAPSPVTMAYTDFLIARTYTED------------------YVVGVAAVLPCY 673 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcC----CCCChHHHHHHHHHHHHHhcCC------------------HHHHHHHHHHHH
Confidence 6655 4567999999999999863 6789999999999999986332 468999999999
Q ss_pred HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCC
Q 008499 165 RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQP 244 (563)
Q Consensus 165 ~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~ 244 (563)
|+|.+||+++.+.. .++|+|++||++|++++|.++|.++++++|+++..++++++++|+++|.++|+||++||||+
T Consensus 674 w~Y~~ig~~l~~~~---~~~~~Y~~WI~~Y~~~~f~~~v~~~~~~ld~~~~~~s~~~~~~l~~~F~~a~~lE~~Fwd~A- 749 (755)
T PRK09517 674 WLYAEIGLMLAEQN---HDEHPYKDWLNTYSGEEFIAGTRAAIARVEKALENAGPEQRVDAARAFLSASVHEREFFDQA- 749 (755)
T ss_pred HHHHHHHHHHHhcc---CCCchHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 99999999997632 25679999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC
Q 008499 245 LAQ 247 (563)
Q Consensus 245 ~~~ 247 (563)
+++
T Consensus 750 ~~~ 752 (755)
T PRK09517 750 TRH 752 (755)
T ss_pred Hhc
Confidence 543
No 5
>PF03070 TENA_THI-4: TENA/THI-4/PQQC family; InterPro: IPR004305 Proteins containing this domain are found in all the three major phyla of life: archaebacteria, eubacteria, and eukaryotes. In Bacillus subtilis, TENA is one of a number of proteins that enhance the expression of extracellular enzymes, such as alkaline protease, neutral protease and levansucrase []. The THI-4 protein, which is involved in thiamine biosynthesis, also contains this domain. The C-terminal part of these proteins consistently show significant sequence similarity to TENA proteins. This similarity was first noted with the Neurospora crassa THI-4 []. The exact molecular function of this domain is uncertain.; PDB: 2RD3_D 3RM5_B 1UDD_D 1Z72_B 3HML_A 3HLX_A 3HNH_A 3DDE_B 3OQL_A 2A6B_A ....
Probab=100.00 E-value=1e-40 Score=325.86 Aligned_cols=203 Identities=35% Similarity=0.556 Sum_probs=183.5
Q ss_pred HHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHH
Q 008499 21 WIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAK-LSISELRKGVLEELKMHD 99 (563)
Q Consensus 21 w~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~-~~l~~~~~~i~~E~~~h~ 99 (563)
|++..+.|..+++||||++|++||||.++|++||+||++||.+|+|+++.+++++++.+.+ .++..+...+.+|+++|+
T Consensus 1 ~~~~~~~w~~~~~HPFv~~l~~GtL~~~~f~~Yl~QD~~yl~~~~r~~a~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 80 (210)
T PF03070_consen 1 HQKAEPIWEAILNHPFVQELADGTLPKEAFRYYLIQDYHYLKHFARALALLASKAPDPEEQRELLSRLIQEIEEELELHE 80 (210)
T ss_dssp SHHTHHHHHHHHTSHHHHHHHTTESEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHCCHHHHHHhCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666777799999999999999999999999999999999999999999999999987 555566667778999999
Q ss_pred HHHHHhCCCccc--ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Q 008499 100 SFVKEWGTDLAK--MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHA 176 (563)
Q Consensus 100 ~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~~~ 176 (563)
.+++.+|++.++ ..+++|+|++|++||.+++. ++ ++++++||+||+|+|.++|+++..
T Consensus 81 ~~~~~~gi~~~~~~~~~~~p~~~~y~~~l~~~a~~~~-------------------~~~~l~al~pc~~~Y~~~~~~~~~ 141 (210)
T PF03070_consen 81 DFAEELGISREDLENIEPSPATRAYTDFLLSLAQTGS-------------------LAEGLAALLPCEWIYAEIGKRLAE 141 (210)
T ss_dssp HHHHHTTSHHHHHHHSTC-HHHHHHHHHHHHHHHHSS-------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHhhhhhhHHHHHHHHHHHHhccCC-------------------HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999974 67899999999999999985 54 378999999999999999999987
Q ss_pred hccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 177 LLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 177 ~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
... ..++++|++||+.|++++|.+.+.++.+++|+++..++++++++++++|+++|++|++||+++
T Consensus 142 ~~~-~~~~~~y~~wi~~y~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~E~~Fwd~a 207 (210)
T PF03070_consen 142 KLR-APEDNPYQEWIDMYASEEFEAFVEWLEELLDELAAEASDEERERLEEIFRRSCELEYDFWDAA 207 (210)
T ss_dssp HCS-TTSSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-CCCCccHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653 347889999999999999999999999999999988899999999999999999999999998
No 6
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.95 E-value=2.5e-27 Score=237.32 Aligned_cols=227 Identities=18% Similarity=0.268 Sum_probs=183.4
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+++++||+|||.|||+.-+ .++.+.. +||++.+..+.+++.|.++..+++++|+|+|.++
T Consensus 20 ~~~lqvisDFD~Tlt~~~~--------~~g~~~~------------s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~ 79 (277)
T TIGR01544 20 AAKLQIISDFDYTLSRFSY--------EDGKRCP------------TCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDP 79 (277)
T ss_pred hhheEEeeccCccceeeec--------CCCCCCc------------chHhHHhhCCCCCHHHHHHHHHHHhhccceecCC
Confidence 4899999999999998632 1223332 5677888888899999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG 418 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~ 418 (563)
.++.+++.++ |.|||.++++.+++. +++++++.++.+ ++.++||+.+|++.|+++| +|++|+|+|+ .
T Consensus 80 ~~~~~eK~~~---m~eWw~k~~~l~~~~----~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~G---Ipv~IvS~G~-~ 148 (277)
T TIGR01544 80 VLTVEEKYPY---MVEWWTKSHGLLVQQ----AFPKAKIKEIVAESDVMLKDGYENFFDKLQQHS---IPVFIFSAGI-G 148 (277)
T ss_pred CCChHHhhhH---HHHHHHHHHHHHhcC----CCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCC---CcEEEEeCCc-H
Confidence 9999999998 569999999999874 569999999987 8999999999999999999 9999999997 8
Q ss_pred HhhHHHHhC-CC--CcceEEeeccEec-CccccCcccccCCCCCCcHHHHHH-HHHHhC-CCCCccEEEEcCCcCchHHh
Q 008499 419 DLIRASFSS-GL--NALNVHANEFSFK-ESISTGEIIEKVESPIDKVQAFNN-TLEKYG-TDRKNLSVYIGDSVGDLLCL 492 (563)
Q Consensus 419 ~~I~~~L~~-~l--~~~~I~aN~l~~~-~g~~tG~~~~~~~~g~~K~~~l~~-~~~~~~-~~~~~~viyiGDs~~Dl~~l 492 (563)
.+|+.+|++ ++ .+++|+||+|.|+ +|.++| +.+++....+|.+.+.+ ..+..+ .-.+.++|++|||.||+.|.
T Consensus 149 ~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG-~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma 227 (277)
T TIGR01544 149 NVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG-FKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMA 227 (277)
T ss_pred HHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC-CCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHh
Confidence 999999997 66 5679999999996 689999 66677778899876654 333333 12357899999999999997
Q ss_pred hhc-C---c-cEEEcCC---hhHHHHHHhhCCeee
Q 008499 493 LEA-D---I-GIVIGSS---SSLRRVGSQFGVTFI 519 (563)
Q Consensus 493 ~~A-d---~-givi~~~---~~L~~~~~~~gi~~~ 519 (563)
.-. . + .|.|-+. ..|.+|.+.+.|-++
T Consensus 228 ~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~ 262 (277)
T TIGR01544 228 DGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLV 262 (277)
T ss_pred cCCCcccceEEEEecccCHHHHHHHHHHhCCEEEE
Confidence 765 1 1 2222222 467778888877554
No 7
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription]
Probab=99.91 E-value=1.3e-23 Score=214.29 Aligned_cols=207 Identities=20% Similarity=0.313 Sum_probs=184.3
Q ss_pred chHHHHHHHH--hHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 008499 14 EGLARRLWIK--FKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGV 91 (563)
Q Consensus 14 ~~~~~~lw~~--~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i 91 (563)
+.|...+... ..+.|...++|+|+.+++.|||+...|..||.|||+||-+|+|+++....+.+..++++.-......+
T Consensus 309 g~f~~yl~~hpkv~p~W~s~inh~fv~~~~~Gtl~~~~fq~~l~qdy~ylIn~ara~~v~g~ks~~i~~ie~~~~iv~~v 388 (523)
T KOG2598|consen 309 GSFFNYLINHPKVKPKWDSYINHEFVKQLADGTLERKKFQDYLEQDYLYLINYARAHGVAGSKSPTIEDIEKEAVIVQHV 388 (523)
T ss_pred HHHHHHHhhCcccChhHHHHhhHHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHHHhhhcccCCcHHHHHHHhHHHHHH
Confidence 5677777654 36678888999999999999999999999999999999999999999999999999887777777778
Q ss_pred HHHHHHHHHHHHHhCCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHH
Q 008499 92 LEELKMHDSFVKEWGTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAF 169 (563)
Q Consensus 92 ~~E~~~h~~~~~~~gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ 169 (563)
.+|+.+|.++++.+|++..+ ...+.|++++|.+|+..+++++. .+++..|+.| |.+
T Consensus 389 ~~e~~~h~~l~e~~Gv~~~d~~~~~~~pa~~Aysry~~d~~~~g~------------------~~~l~~a~~p----y~~ 446 (523)
T KOG2598|consen 389 REELVQHVRLREEYGVSDPDYLSCKKGPALRAYSRYINDTGRRGN------------------WQELVIALNP----YVF 446 (523)
T ss_pred HhhccchHHHHHHhCCCchhhhhcCccHHHHHHHHHhhhhhcccC------------------hhhhhhhhch----hhH
Confidence 89999999999999999874 44559999999999999997443 2567999999 888
Q ss_pred HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 170 LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 170 ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
+..++.... .+.++.+|.+|+++|++.++...++.....++......++++.+.+..+|.++|++|..||+.+
T Consensus 447 ~l~~lk~~~-~as~g~vy~~w~e~~~~~~~~~ai~~g~~~l~~i~~~~~pe~~~~l~~i~~~~~~~Et~fw~t~ 519 (523)
T KOG2598|consen 447 ALDKLKDEI-TASEGSVYVEWVETYSSSWYTSAIDEGERLLEHIVETLSPEKLQTLVTIFARVTEFETLFWTTA 519 (523)
T ss_pred HHHHHHhhc-ccCCCCceeehhhhccchhHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 888887765 3557899999999999999999999999999999999999999999999999999999999988
No 8
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.91 E-value=1.3e-23 Score=192.30 Aligned_cols=204 Identities=19% Similarity=0.267 Sum_probs=149.3
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
++.+|++|||||||.+|+...|..-. ...+|+.+.+..+.+-
T Consensus 2 kk~vi~sDFDGTITl~Ds~~~itdtf-----------------------~~~e~k~l~~~vls~t--------------- 43 (220)
T COG4359 2 KKPVIFSDFDGTITLNDSNDYITDTF-----------------------GPGEWKALKDGVLSKT--------------- 43 (220)
T ss_pred CceEEEecCCCceEecchhHHHHhcc-----------------------CchHHHHHHHHHhhCc---------------
Confidence 56799999999999999998877633 3467776666543332
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc-cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
++..+-. .+|..+ =+.+.+++.+... ++.++|||++|++++++++ +|++|||+|. ..|
T Consensus 44 iS~rd~~--------------g~mf~~---i~~s~~Eile~llk~i~Idp~fKef~e~ike~d---i~fiVvSsGm-~~f 102 (220)
T COG4359 44 ISFRDGF--------------GRMFGS---IHSSLEEILEFLLKDIKIDPGFKEFVEWIKEHD---IPFIVVSSGM-DPF 102 (220)
T ss_pred eeHHHHH--------------HHHHHh---cCCCHHHHHHHHHhhcccCccHHHHHHHHHHcC---CCEEEEeCCC-chH
Confidence 2222211 122221 1336666666654 6999999999999999999 9999999995 889
Q ss_pred hHHHHhC--C---CCcceEEeeccEecC-ccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh
Q 008499 421 IRASFSS--G---LNALNVHANEFSFKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 421 I~~~L~~--~---l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
|...|++ | +..++|++|+..++. |-..=...+....|.||...++++.+. +..++|+|||++|+.+++.
T Consensus 103 I~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI~~l~e~-----~e~~fy~GDsvsDlsaakl 177 (220)
T COG4359 103 IYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVIHELSEP-----NESIFYCGDSVSDLSAAKL 177 (220)
T ss_pred HHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhHHHhhcC-----CceEEEecCCcccccHhhh
Confidence 9999987 2 445677777777653 311111123467899999999998874 4569999999999999999
Q ss_pred cCccEEEcCChhHHHHHHhhCCeeeecCc--hhHHhHHhh
Q 008499 495 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP--GLVKKQKEY 532 (563)
Q Consensus 495 Ad~givi~~~~~L~~~~~~~gi~~~p~~~--~~~~~~~~~ 532 (563)
+| ++|+ +..|..+|++++++|+||++ .+++.++.+
T Consensus 178 sD--llFA-K~~L~nyc~eqn~~f~~fe~F~eIlk~iekv 214 (220)
T COG4359 178 SD--LLFA-KDDLLNYCREQNLNFLEFETFYEILKEIEKV 214 (220)
T ss_pred hh--hHhh-HHHHHHHHHHcCCCCcccccHHHHHHHHHHH
Confidence 99 5675 56899999999999999986 455544443
No 9
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.91 E-value=9.1e-24 Score=206.22 Aligned_cols=199 Identities=22% Similarity=0.208 Sum_probs=161.7
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+.+.+++||||+|+|...+++.+++.+. .......++...+..+
T Consensus 3 ~~~~L~vFD~D~TLi~~~~~~~~~~~~g----------------------~~~~v~~~t~~~~~~~-------------- 46 (212)
T COG0560 3 RMKKLAVFDLDGTLINAELIDELARGAG----------------------VGEEVLAITERAMRGE-------------- 46 (212)
T ss_pred CccceEEEecccchhhHHHHHHHHHHhC----------------------CHHHHHHHHHHHhccc--------------
Confidence 4677999999999999888888777552 2334444444332222
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhcc-CCCCchHHHHHHHHHHcCCCCCcEEEEccccChH
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~-i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~ 419 (563)
.+|.+.++ .++ .+++|++.+.+.+..++ +.++||+.++++++++.| +.++|||+|+ ..
T Consensus 47 -------~~~~~~~~-------~~v---~~l~g~~~~~v~~~~~~~~~l~~ga~elv~~lk~~G---~~v~iiSgg~-~~ 105 (212)
T COG0560 47 -------LDFEESLR-------LRV---ALLKGLPVEVLEEVREEFLRLTPGAEELVAALKAAG---AKVVIISGGF-TF 105 (212)
T ss_pred -------ccHHHHHH-------HHH---HHhCCCCHHHHHHHHHhcCcCCccHHHHHHHHHHCC---CEEEEEcCCh-HH
Confidence 22323232 234 67899999999999999 999999999999999999 9999999996 44
Q ss_pred hhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 420 LIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 420 ~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
+++. +.+.++..+++||+++.++|++||.+.++++.+.+|..+++++.++.+.+ ...+++||||.||++||..||.|+
T Consensus 106 lv~~-ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~i 183 (212)
T COG0560 106 LVEP-IAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAELGIP-LEETVAYGDSANDLPMLEAAGLPI 183 (212)
T ss_pred HHHH-HHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCCe
Confidence 5554 44444457899999999988999999999999999999999999988764 468999999999999999999999
Q ss_pred EEcCChhHHHHHHhhCCee
Q 008499 500 VIGSSSSLRRVGSQFGVTF 518 (563)
Q Consensus 500 vi~~~~~L~~~~~~~gi~~ 518 (563)
++++++.|.+.++..+++.
T Consensus 184 a~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 184 AVNPKPKLRALADVRIWPI 202 (212)
T ss_pred EeCcCHHHHHHHHHhcChh
Confidence 9999999999999999865
No 10
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.89 E-value=3.1e-22 Score=196.32 Aligned_cols=193 Identities=18% Similarity=0.192 Sum_probs=139.5
Q ss_pred EEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccCCCH
Q 008499 265 IIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNY 344 (563)
Q Consensus 265 ~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~~~~ 344 (563)
+|+||||||||..||+..+++.. ..+.|..+...++.+- +++
T Consensus 1 ~~~fDFDgTit~~d~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~---------------~~~ 42 (214)
T TIGR03333 1 FIICDFDGTITNNDNIISIMKQF-----------------------APPEWEALKDGVLSKT---------------LSI 42 (214)
T ss_pred CEEeccCCCCCcchhHHHHHHHh-----------------------CcHHHHHHHHHHHcCC---------------ccH
Confidence 48999999999999987776622 2356766665544321 233
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHh-ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHH
Q 008499 345 ETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA 423 (563)
Q Consensus 345 ~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~ 423 (563)
.+... ++. ..++.-..+++.++. +.+.++||+.++++.++++| ++++|+|+|. ..+|+.
T Consensus 43 ~e~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~~i~~ 102 (214)
T TIGR03333 43 QEGVG--------------RMF--GLLPSSLKEEITSFVLETAEIREGFREFVAFINEHG---IPFYVISGGM-DFFVYP 102 (214)
T ss_pred HHHHH--------------HHH--hhCCCchHHHHHHHHHhcCcccccHHHHHHHHHHCC---CeEEEECCCc-HHHHHH
Confidence 32211 111 222222345676654 46899999999999999988 9999999994 789999
Q ss_pred HHhCCCCcceEEeeccEecCccccCcccc------cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 424 SFSSGLNALNVHANEFSFKESISTGEIIE------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 424 ~L~~~l~~~~I~aN~l~~~~g~~tG~~~~------~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
+++.-.....|+||++.++++..++.... ...+|.||..+++++... +.+++|||||.||++++..||+
T Consensus 103 il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~-----~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 103 LLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPSLIRKLSEP-----NDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHHHHHHHhhc-----CCcEEEEeCCHHHHHHHHhCCe
Confidence 88762123679999999987654443321 123488999999987642 4679999999999999999994
Q ss_pred cEEEcCChhHHHHHHhhCCeeeecCc
Q 008499 498 GIVIGSSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 498 givi~~~~~L~~~~~~~gi~~~p~~~ 523 (563)
+++ +..|..+|++.|++++|+.+
T Consensus 178 --~~a-r~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 178 --CFA-RDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred --eEe-hHHHHHHHHHcCCCccCcCC
Confidence 554 33688999999999999975
No 11
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.87 E-value=1.8e-21 Score=201.40 Aligned_cols=192 Identities=19% Similarity=0.204 Sum_probs=153.3
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
+.+.+++||||||++..++++.+++.. + ....+..+++.++.+
T Consensus 108 ~~~~LvvfDmDGTLI~~e~i~eia~~~-----g-----------------~~~~v~~it~~~m~G--------------- 150 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIECIDEIAKLA-----G-----------------TGEEVAEVTERAMRG--------------- 150 (322)
T ss_pred cCCCEEEEECCCCCcchHHHHHHHHHh-----C-----------------CchHHHHHHHHHHcC---------------
Confidence 467799999999999999999988855 1 344566666654332
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
+++|.++++ .++ ..++|.+.+.+.+..+.+++.||+.++++.|+++| +++.|+|+|+ ..+
T Consensus 151 ------eldf~esl~-------~rv---~~l~g~~~~il~~v~~~l~l~pGa~elL~~Lk~~G---~~~aIvSgg~-~~~ 210 (322)
T PRK11133 151 ------ELDFEASLR-------QRV---ATLKGADANILQQVRENLPLMPGLTELVLKLQALG---WKVAIASGGF-TYF 210 (322)
T ss_pred ------CcCHHHHHH-------HHH---HHhCCCCHHHHHHHHHhCCCChhHHHHHHHHHHcC---CEEEEEECCc-chh
Confidence 222333332 234 35688887777777778999999999999999999 9999999996 567
Q ss_pred hHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 421 IRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 421 I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
++..++. ++..++++|.+++.+|..||.+.+.+..+..|...++++.+..+.+ ..++|+||||.||++|+..||+||+
T Consensus 211 ~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 211 ADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEYEIP-LAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHcCCC-hhhEEEEECCHHHHHHHHHCCCeEE
Confidence 7766554 3346899999999999999998887778889999999999888763 5789999999999999999999999
Q ss_pred EcCChhHHHHH
Q 008499 501 IGSSSSLRRVG 511 (563)
Q Consensus 501 i~~~~~L~~~~ 511 (563)
+++++.+++.+
T Consensus 289 ~nAkp~Vk~~A 299 (322)
T PRK11133 289 YHAKPKVNEQA 299 (322)
T ss_pred eCCCHHHHhhC
Confidence 99999988655
No 12
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.87 E-value=3.7e-21 Score=189.30 Aligned_cols=196 Identities=19% Similarity=0.195 Sum_probs=139.5
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
++.+|+||||||||..|+...+++-. ..+.|..+.+.|+++.
T Consensus 2 ~~~~vifDfDgTi~~~d~~~~~~~~~-----------------------~~~~~~~i~~~~~~g~--------------- 43 (219)
T PRK09552 2 MSIQIFCDFDGTITNNDNIIAIMKKF-----------------------APPEWEELKDDILSQE--------------- 43 (219)
T ss_pred CCcEEEEcCCCCCCcchhhHHHHHHh-----------------------CHHHHHHHHHHHHhCC---------------
Confidence 35699999999999999976544321 1245777766664432
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHh-ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG-ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~-~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
+.+.+- +. ++. ..+.+...+++.+.. +++.++||+.++++.++++| +++.|+|+|+ ..+
T Consensus 44 ~~~~~~------~~--------~~~--~~l~~~~~~~~~~~~~~~~~l~pG~~e~l~~l~~~g---~~~~IvS~~~-~~~ 103 (219)
T PRK09552 44 LSIQEG------VG--------QMF--QLLPSNLKEEIIQFLLETAEIREGFHEFVQFVKENN---IPFYVVSGGM-DFF 103 (219)
T ss_pred cCHHHH------HH--------HHH--HhCCCCchHHHHHHHHhCCCcCcCHHHHHHHHHHcC---CeEEEECCCc-HHH
Confidence 222211 11 111 223444456676654 57899999999999999999 9999999996 889
Q ss_pred hHHHHhCCCCcceEEeeccEecCccccCcccccC------CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh
Q 008499 421 IRASFSSGLNALNVHANEFSFKESISTGEIIEKV------ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 421 I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~------~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
|+.+|++-+....|+||.+.++++..+.....+. .++.+|..+++++.. .+.++||||||.+|+++++.
T Consensus 104 i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~-----~~~~~i~iGDs~~Di~aa~~ 178 (219)
T PRK09552 104 VYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSLIRKLSD-----TNDFHIVIGDSITDLEAAKQ 178 (219)
T ss_pred HHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHHHHHhcc-----CCCCEEEEeCCHHHHHHHHH
Confidence 9998876333467999999887654333222111 246789988887653 24689999999999999999
Q ss_pred cCccEEEcCChhHHHHHHhhCCeeeecCc
Q 008499 495 ADIGIVIGSSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 495 Ad~givi~~~~~L~~~~~~~gi~~~p~~~ 523 (563)
||+ +++ ...|.++|+++|++++|+.+
T Consensus 179 Ag~--~~a-~~~l~~~~~~~~~~~~~~~~ 204 (219)
T PRK09552 179 ADK--VFA-RDFLITKCEELGIPYTPFET 204 (219)
T ss_pred CCc--cee-HHHHHHHHHHcCCCccccCC
Confidence 985 444 44788999999999999975
No 13
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.85 E-value=1.1e-21 Score=187.93 Aligned_cols=227 Identities=16% Similarity=0.255 Sum_probs=171.1
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccc-cHhHhHHHHHHHHHHHHhhcCCCccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRN-TWGLLSKQYTEEYEQCIESFMPSEKV 339 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~l~~~y~~~~~~~~~~~~p~~~~ 339 (563)
+.++++|+|||.|||++-|- .++++++ ++.+.+ ..+.+...|.++..+++.+|+|+|.+
T Consensus 36 a~~~~vIsdfd~TLSrfa~~--------~G~r~pS------------~~~Vfd~~~~~~~~e~~~k~~~LyhkY~PIEid 95 (298)
T KOG3128|consen 36 AGKLQVISDFDYTLSRFATE--------QGKRCPS------------CFGVFDDNVKRLKPECRAKFVALYHKYYPIEID 95 (298)
T ss_pred ccceeEeecCchhHHHHHHh--------hcCcCCc------------cccchhhhhhcCCHHHHHHHHHHHhhccCcccC
Confidence 68999999999999975221 2455554 344555 67778889999999999999999999
Q ss_pred cCCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC
Q 008499 340 ENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE--RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC 417 (563)
Q Consensus 340 ~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~--~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws 417 (563)
+.++++++.+++ .|||.+||+.+++ .|+++.+|++.+. ++.||+|+.+|+..|++++ +|+.|+|+|.
T Consensus 96 P~ltieEKvp~M---eeWW~kSH~Lliq----~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~---IP~~iFSAGi- 164 (298)
T KOG3128|consen 96 PVLTIEEKVPHM---EEWWTKSHELLIQ----GGFSKNAIDDIVAESNIALREGYEEFFEALQAHE---IPLLIFSAGI- 164 (298)
T ss_pred CCCChhhhchHH---HHHHhcccceeec----CCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC---CceEEEecch-
Confidence 999999999985 5999999999987 4679999999877 6899999999999999999 9999999996
Q ss_pred hHhhHHHHhC--C-CCcceEEeeccEecC-ccccCcccccCCCCCCcHH-HHHHHHHHhC-CCCCccEEEEcCCcCchHH
Q 008499 418 GDLIRASFSS--G-LNALNVHANEFSFKE-SISTGEIIEKVESPIDKVQ-AFNNTLEKYG-TDRKNLSVYIGDSVGDLLC 491 (563)
Q Consensus 418 ~~~I~~~L~~--~-l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K~~-~l~~~~~~~~-~~~~~~viyiGDs~~Dl~~ 491 (563)
++.|+.++++ + .++.+++||-+.|++ |...| |..++....+|.. +++.-..... ...+.++|+.|||.+|+.|
T Consensus 165 gdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g-F~~~Lihtfnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~m 243 (298)
T KOG3128|consen 165 GDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG-FSQPLIHTFNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHM 243 (298)
T ss_pred HHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh-hhHHHHHHHccchHHHHhhhHHHhhccCCceEEEeccccccchh
Confidence 9999999988 3 468899999999984 54343 3333333344432 2222111111 1235789999999999999
Q ss_pred hhhc-Cc------cEEEc-CChhHHHHHHhhCCeee
Q 008499 492 LLEA-DI------GIVIG-SSSSLRRVGSQFGVTFI 519 (563)
Q Consensus 492 l~~A-d~------givi~-~~~~L~~~~~~~gi~~~ 519 (563)
...+ ++ |+... -...+.+|.+.+.|-.+
T Consensus 244 a~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~ 279 (298)
T KOG3128|consen 244 ADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLV 279 (298)
T ss_pred hcCCcccccceeeecccchHHHHHHHHHhhcceEEe
Confidence 8875 22 22222 11467788888877544
No 14
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=99.85 E-value=1.8e-21 Score=190.62 Aligned_cols=199 Identities=21% Similarity=0.369 Sum_probs=143.5
Q ss_pred CcccccccHhHhHHHHHHHHHHHHhhcCCCccccCCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhc--
Q 008499 307 SSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGE-- 384 (563)
Q Consensus 307 ~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~-- 384 (563)
+||++....+.+++.|.++..+++++|+|+|.++.++.+++.++ |.|||.++|+.+++. |+++++|.++++
T Consensus 15 sshgil~~~~~~~~~~~~k~~~L~~kY~PIE~dp~~s~eEK~p~---M~EWw~kah~llv~~----~l~k~~i~~~V~~s 87 (246)
T PF05822_consen 15 SSHGILENSKLLPEEYRKKLKELFEKYYPIEIDPTMSIEEKIPH---MEEWWTKAHELLVEQ----GLTKSEIEEAVKES 87 (246)
T ss_dssp -HHHHHHTSTTS-HHHHHHHHHHHHHHHHHHT-SSS-HHHHHHH---HHHHHHHHHHHHHHH----T-BGGGHHHHHHCS
T ss_pred ChHHHHhcCCcCCHHHHHHHHHHHhhccccccCCCCCHHHHHHH---HHHHHHHHHHHHHhc----CcCHHHHHHHHHhc
Confidence 46777777788999999999999999999999999999999987 569999999999986 469999999887
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-C--CCcceEEeeccEecC-ccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-G--LNALNVHANEFSFKE-SISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~--l~~~~I~aN~l~~~~-g~~tG~~~~~~~~g~~K 460 (563)
++.||+|+.+||+.|.+++ +|+.|+|+|. +++|+.+|++ + .++++|+||.|.||+ |...| |.+++....+|
T Consensus 88 ~i~LRdg~~~~f~~L~~~~---IP~lIFSAGl-gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~g-F~~~lIH~~NK 162 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHN---IPLLIFSAGL-GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVG-FKGPLIHTFNK 162 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT-----EEEEEEEE-HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEE-E-SS---TT-H
T ss_pred chhhhcCHHHHHHHHHhcC---CCEEEEeCCc-HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEee-cCCCceEEeeC
Confidence 6899999999999999988 9999999996 9999999998 4 478999999999974 77766 56677777788
Q ss_pred HH-HHH--HHHHHhCCCCCccEEEEcCCcCchHHhhhc-Cc------cEEEcC-ChhHHHHHHhhCCeee
Q 008499 461 VQ-AFN--NTLEKYGTDRKNLSVYIGDSVGDLLCLLEA-DI------GIVIGS-SSSLRRVGSQFGVTFI 519 (563)
Q Consensus 461 ~~-~l~--~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A-d~------givi~~-~~~L~~~~~~~gi~~~ 519 (563)
.. ++. .+.+. ...+.+++.+|||.+|+.|..-. +. |++-.. ...|.+|.+.+.|-++
T Consensus 163 n~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv 230 (246)
T PF05822_consen 163 NESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLV 230 (246)
T ss_dssp HHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEE
T ss_pred CcccccCchHHHH--hccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEE
Confidence 75 331 22222 22467899999999999998766 33 222221 1357888888876544
No 15
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.83 E-value=5.9e-20 Score=180.55 Aligned_cols=129 Identities=19% Similarity=0.266 Sum_probs=101.2
Q ss_pred CCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecC-cccc
Q 008499 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKE-SIST 447 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~-g~~t 447 (563)
.|++.++|.+..+.+++.||+.++++.+.++. .+.+++|||++ ...||+.+|++ |+.. .+|++|...|++ |.+.
T Consensus 56 ~gvt~~~I~~~l~~ip~~pgm~~~l~~l~~~~-~~~~~~IiSDa-Ns~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~ 133 (234)
T PF06888_consen 56 QGVTPEDIRDALRSIPIDPGMKELLRFLAKNQ-RGFDLIIISDA-NSFFIETILEHHGLRDCFSEIFTNPACFDADGRLR 133 (234)
T ss_pred cCCCHHHHHHHHHcCCCCccHHHHHHHHHhcC-CCceEEEEeCC-cHhHHHHHHHhCCCccccceEEeCCceecCCceEE
Confidence 47899999999999999999999999996521 23999999999 68999999998 7754 389999999975 5422
Q ss_pred -Cccc---cc-CCCCCCcHHHHHHHHHHhCC--CCCccEEEEcCCcCchHHhhh---cCccEEEcCC
Q 008499 448 -GEII---EK-VESPIDKVQAFNNTLEKYGT--DRKNLSVYIGDSVGDLLCLLE---ADIGIVIGSS 504 (563)
Q Consensus 448 -G~~~---~~-~~~g~~K~~~l~~~~~~~~~--~~~~~viyiGDs~~Dl~~l~~---Ad~givi~~~ 504 (563)
.++. ++ +..++||..+|++++..... ..+.++||||||.||+|+++. .| +|+..+
T Consensus 134 v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D--~v~~R~ 198 (234)
T PF06888_consen 134 VRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRD--VVFPRK 198 (234)
T ss_pred EeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCC--EEecCC
Confidence 2222 23 23347999999999986411 135799999999999999986 67 677543
No 16
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.82 E-value=9e-20 Score=172.59 Aligned_cols=171 Identities=22% Similarity=0.254 Sum_probs=126.8
Q ss_pred EEeeccccceecccc-hHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccCCC
Q 008499 265 IIFSDFDLTCTIVDS-SAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVENFN 343 (563)
Q Consensus 265 ~ii~DFD~TiT~~Dt-~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~~~ 343 (563)
+++||||||||..|| ...+.+.. + ..+.|..+.+.|+.+.. +
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~-----~-----------------~~~~~~~~~~~~~~g~i---------------~ 43 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLL-----G-----------------TNDEVIELTRLAPSGRI---------------S 43 (177)
T ss_pred CEEecCccccccchhhHHHHHHHh-----C-----------------ChHHHHHHHHHHHCCCC---------------C
Confidence 489999999999999 55555433 1 12455566665544321 2
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHH-H-hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhh
Q 008499 344 YETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKK-A-GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLI 421 (563)
Q Consensus 344 ~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~-~-~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I 421 (563)
+.+ .+. +. ...+++...+++.+ + .+.+.++||+.++++.++++| ++++|+|+|. ..+|
T Consensus 44 ~~~------~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~ivS~~~-~~~i 103 (177)
T TIGR01488 44 FED------ALG--------RR--LALLHRSRSEEVAKEFLARQVALRPGARELISWLKERG---IDTVIVSGGF-DFFV 103 (177)
T ss_pred HHH------HHH--------HH--HHHhCCCCHHHHHHHHHHhcCCcCcCHHHHHHHHHHCC---CEEEEECCCc-HHHH
Confidence 221 121 11 24557777566665 5 457889999999999999998 9999999995 7889
Q ss_pred HHHHhC-CCCcceEEeeccEec-CccccCcccc-cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 422 RASFSS-GLNALNVHANEFSFK-ESISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 422 ~~~L~~-~l~~~~I~aN~l~~~-~g~~tG~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
+.+++. ++. ++++|++.++ +|..+|++.+ .++.+.+|...++++....+.+ +.+++|||||.||++|++.|
T Consensus 104 ~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 104 EPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 988876 653 7999999996 6788888765 5677899999999998776542 46899999999999999865
No 17
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.82 E-value=3.8e-19 Score=173.80 Aligned_cols=131 Identities=12% Similarity=0.098 Sum_probs=106.7
Q ss_pred hhccCCCCHHHHHHHhc--------cCCCCchHHHHHH-HHHHcCCCCCcEEEEccccChHhhHHHHhC-C-CCcceEEe
Q 008499 368 SGVLKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSS-G-LNALNVHA 436 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~--------~i~lrpG~~efl~-~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~-l~~~~I~a 436 (563)
...|+|++.+++.+..+ ...++||+.+.++ .++++| ++++|||++. ..+++.+.+. + ++.++++|
T Consensus 67 ~~~~~g~~~~~l~~~~~~f~~~~~~~~~l~pga~e~L~~~l~~~G---~~v~IvSas~-~~~~~~ia~~~~~~~~~~~i~ 142 (210)
T TIGR01545 67 WACTFGHREAHLQDLEADFVAAFRDKVTAFPLVAERLRQYLESSD---ADIWLITGSP-QPLVEAVYFDSNFIHRLNLIA 142 (210)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhCC---CEEEEEcCCc-HHHHHHHHHhccccccCcEEE
Confidence 46788999988876543 2468999999997 566678 9999999983 6667766654 3 35578999
Q ss_pred eccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHH
Q 008499 437 NEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 509 (563)
Q Consensus 437 N~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~ 509 (563)
+++++.+| |.+.+.+|.|..|++++++++.. ....++++|||.||++||..||.++++++++.|++
T Consensus 143 t~le~~~g---g~~~g~~c~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~~~L~~ 208 (210)
T TIGR01545 143 SQIERGNG---GWVLPLRCLGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEHRWRVSKRGELQQ 208 (210)
T ss_pred EEeEEeCC---ceEcCccCCChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCCcEEECcchHhcc
Confidence 99998655 77778899999999999998842 23567899999999999999999999999988874
No 18
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.80 E-value=5.8e-19 Score=173.28 Aligned_cols=136 Identities=23% Similarity=0.308 Sum_probs=114.6
Q ss_pred ccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccC
Q 008499 370 VLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 370 ~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG 448 (563)
.|.+.+.+.+.+..+.+.++||+.++++.++++| ++++|||+|+ ..+++.+++. ++ .++++|.+.++++.++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~~i--~~~~~~~~~~~~~~~~~ 141 (219)
T TIGR00338 68 LLKGLPVELLKEVRENLPLTEGAEELVKTLKEKG---YKVAVISGGF-DLFAEHVKDKLGL--DAAFANRLEVEDGKLTG 141 (219)
T ss_pred HhCCCCHHHHHHHHhcCCcCCCHHHHHHHHHHCC---CEEEEECCCc-HHHHHHHHHHcCC--CceEeeEEEEECCEEEE
Confidence 3467788888888888999999999999999988 9999999995 7888888876 65 35899999998888888
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHH
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 512 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~ 512 (563)
...+....+.+|...++.+++..+. .+.+++|||||.+|+.++..||+++++++++.+++.+.
T Consensus 142 ~~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~ 204 (219)
T TIGR00338 142 LVEGPIVDASYKGKTLLILLRKEGI-SPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKAD 204 (219)
T ss_pred EecCcccCCcccHHHHHHHHHHcCC-CHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhch
Confidence 7766655666799999998887765 35789999999999999999999999998877776553
No 19
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.9e-19 Score=166.70 Aligned_cols=191 Identities=18% Similarity=0.186 Sum_probs=147.4
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
.+-+++||.|+|++..+-|+.|+.... .......++.
T Consensus 15 ~~~aVcFDvDSTvi~eEgIdelA~~~G----------------------~~~~Va~~T~--------------------- 51 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGIDELAAYCG----------------------VGEAVAEVTR--------------------- 51 (227)
T ss_pred hcCeEEEecCcchhHHhhHHHHHHHhC----------------------chHHHHHHHH---------------------
Confidence 445899999999999999999999773 2334444444
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHh--ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChH
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAG--ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~--~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~ 419 (563)
..|.+..+|.++|+ .|+ .+|++ +.+++.+.. +...|.||..+|++.|+++| ..++++|+|| ..
T Consensus 52 rAMng~~~F~eaL~-------~Rl---~llqp-~~~qv~~~v~~~k~~lT~Gi~eLv~~L~~~~---~~v~liSGGF-~~ 116 (227)
T KOG1615|consen 52 RAMNGEADFQEALA-------ARL---SLLQP-LQVQVEQFVIKQKPTLTPGIRELVSRLHARG---TQVYLISGGF-RQ 116 (227)
T ss_pred HHhCCCCcHHHHHH-------HHH---HHhcc-cHHHHHHHHhcCCCccCCCHHHHHHHHHHcC---CeEEEEcCCh-HH
Confidence 24777778888887 355 68888 456666654 37899999999999999999 9999999998 77
Q ss_pred hhHHHHhC-CCCcceEEeeccEec-CccccC-cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 420 LIRASFSS-GLNALNVHANEFSFK-ESISTG-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 420 ~I~~~L~~-~l~~~~I~aN~l~~~-~g~~tG-~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
+|..+-.. |++..+|+||.|.|+ +|.++| ....+...+.+|..++..+++.++ ...+++||||.||++|+.-||
T Consensus 117 ~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~lrk~~~---~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 117 LIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALLRKNYN---YKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred HHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHHHhCCC---hheeEEecCCccccccCCchh
Confidence 88887666 888788999999997 477777 555677888899999999988543 467889999999999999987
Q ss_pred ccEEEcCChhHHHHHHhh
Q 008499 497 IGIVIGSSSSLRRVGSQF 514 (563)
Q Consensus 497 ~givi~~~~~L~~~~~~~ 514 (563)
.-+.++ +..+++-++.+
T Consensus 194 afi~~~-g~~~r~~vk~n 210 (227)
T KOG1615|consen 194 AFIGFG-GNVIREGVKAN 210 (227)
T ss_pred hhhccC-CceEcHhhHhc
Confidence 433343 33444444333
No 20
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.78 E-value=2.8e-18 Score=166.16 Aligned_cols=132 Identities=20% Similarity=0.165 Sum_probs=112.3
Q ss_pred hhccCCCCHHHHHHHhcc-------CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeecc
Q 008499 368 SGVLKGINLEDIKKAGER-------LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEF 439 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~-------i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l 439 (563)
...|+|++.+++.+.++. ..++||+.++++.++++| ++++|+|+++ ..+++.+++. ++ .++++|++
T Consensus 61 ~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g---~~v~ivS~s~-~~~v~~~~~~lg~--~~~~~~~l 134 (202)
T TIGR01490 61 LDALAGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEG---HTIVLVSASL-TILVKPLARILGI--DNAIGTRL 134 (202)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHcCC--cceEecce
Confidence 356799999999887653 468999999999999998 9999999995 7788877765 54 56899999
Q ss_pred Ee-cCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 440 SF-KESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 440 ~~-~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
.+ ++|.+||++.++.+.+..|...+++++++.+.+ ...+++||||.+|++|+..|+.++++.+++.
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~~~~~ 201 (202)
T TIGR01490 135 EESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVNPDKK 201 (202)
T ss_pred EEcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeCCCCC
Confidence 98 678899998877888999999999998876652 4689999999999999999999999987754
No 21
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.78 E-value=1.4e-18 Score=168.81 Aligned_cols=128 Identities=20% Similarity=0.247 Sum_probs=109.6
Q ss_pred CCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-ccccCc
Q 008499 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SISTGE 449 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~ 449 (563)
.|++.+++.+..+.+.++||+.++++.++++ .+++|||+|+ ..+++.+++. |+ .+++||++.+++ |.+||.
T Consensus 53 ~g~~~~~i~~~~~~i~l~pga~ell~~lk~~----~~~~IVS~~~-~~~~~~il~~lgi--~~~~an~l~~~~~g~~tG~ 125 (203)
T TIGR02137 53 HGLKLGDIQEVIATLKPLEGAVEFVDWLRER----FQVVILSDTF-YEFSQPLMRQLGF--PTLLCHKLEIDDSDRVVGY 125 (203)
T ss_pred CCCCHHHHHHHHHhCCCCccHHHHHHHHHhC----CeEEEEeCCh-HHHHHHHHHHcCC--chhhceeeEEecCCeeECe
Confidence 4999999999999999999999999999985 3899999996 7788888776 65 479999999988 888886
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhh
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQF 514 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~ 514 (563)
.. ..+.+|..+++.+.. . +.++++||||.||++|+..||+||++++++.+++.+..+
T Consensus 126 ~~---~~~~~K~~~l~~l~~-~----~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~ 182 (203)
T TIGR02137 126 QL---RQKDPKRQSVIAFKS-L----YYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQF 182 (203)
T ss_pred ee---cCcchHHHHHHHHHh-h----CCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCC
Confidence 43 346689999998853 2 247999999999999999999999999999999888554
No 22
>PRK11590 hypothetical protein; Provisional
Probab=99.73 E-value=6.6e-17 Score=158.24 Aligned_cols=128 Identities=13% Similarity=0.068 Sum_probs=103.1
Q ss_pred cCCCCHHHHHHHhc--------cCCCCchHHHHHH-HHHHcCCCCCcEEEEccccChHhhHHHHhC-C-CCcceEEeecc
Q 008499 371 LKGINLEDIKKAGE--------RLSLQDGCTTFFQ-KVVKNENLNANVHVLSYCWCGDLIRASFSS-G-LNALNVHANEF 439 (563)
Q Consensus 371 f~Gi~~~~i~~~~~--------~i~lrpG~~efl~-~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~-l~~~~I~aN~l 439 (563)
+.|++.+++.+..+ .+.+.||+.+.++ .++++| ++++|+|++. ..+++.+++. + ...++++|+++
T Consensus 71 ~~g~~~~~~~~~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G---~~l~IvSas~-~~~~~~il~~l~~~~~~~~i~t~l 146 (211)
T PRK11590 71 TFGHSEARLQALEADFVRWFRDNVTAFPVVQERLTTYLLSSD---ADVWLITGSP-QPLVEQVYFDTPWLPRVNLIASQM 146 (211)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHhCcCCccHHHHHHHHHHhCC---CEEEEEeCCc-HHHHHHHHHHccccccCceEEEEE
Confidence 34666666554432 2567999999995 566678 9999999984 7778877776 5 23578999999
Q ss_pred EecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHH
Q 008499 440 SFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRR 509 (563)
Q Consensus 440 ~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~ 509 (563)
++ .+||++.+.+|.|..|++++++++.. ....++++|||.||++||..|+.++++++++.|++
T Consensus 147 ~~---~~tg~~~g~~c~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~~~l~~ 209 (211)
T PRK11590 147 QR---RYGGWVLTLRCLGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQHRWRVTPRGELQQ 209 (211)
T ss_pred EE---EEccEECCccCCChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCCCEEECccHHhhc
Confidence 77 58899999999999999999998841 23567899999999999999999999999988874
No 23
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.73 E-value=9.2e-17 Score=153.21 Aligned_cols=120 Identities=18% Similarity=0.192 Sum_probs=97.0
Q ss_pred CCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecC-ccccC
Q 008499 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKE-SISTG 448 (563)
Q Consensus 373 Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~-g~~tG 448 (563)
+++.+++.+..+++.++||+.++++.++++| ++++|+|++ ....++..+.. ++.. ..|+||++.+++ |..++
T Consensus 58 ~~~~~~~~~~~~~~~l~~g~~~ll~~l~~~g---~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~ 133 (188)
T TIGR01489 58 GLKEDEILEVLKSAPIDPGFKEFIAFIKEHG---IDFIVISDG-NDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIV 133 (188)
T ss_pred CCCHHHHHHHHHhCCCCccHHHHHHHHHHcC---CcEEEEeCC-cHHHHHHHHHHcCChhheeEEeccCceECCCCcEEE
Confidence 5677788888888999999999999999988 999999998 57888888876 6643 379999999975 55555
Q ss_pred cccc-----cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 449 EIIE-----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 449 ~~~~-----~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.... ....|.+|...+++++..+ +.++||||||.+|+++++.|| ++++
T Consensus 134 ~~~~~~~~~~~~~g~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d--~~~a 186 (188)
T TIGR01489 134 WPHHCHGCCSCPCGCCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSD--VVFA 186 (188)
T ss_pred ecCCCCccCcCCCCCCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCC--cccc
Confidence 3322 2446778999999887642 367999999999999999998 5664
No 24
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.73 E-value=1.1e-16 Score=154.35 Aligned_cols=132 Identities=19% Similarity=0.164 Sum_probs=105.5
Q ss_pred CCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-ccccCcc
Q 008499 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SISTGEI 450 (563)
Q Consensus 373 Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~~ 450 (563)
....+++.+..+++.++||+.++++.++++| ++++|||+|+ ..+++.+++. |+ ..+++|.+.+++ |..++..
T Consensus 66 ~~~~~~~~~~~~~~~~~~g~~e~l~~l~~~g---~~~~IvS~~~-~~~~~~~l~~~g~--~~~~~~~~~~~~~g~~~p~~ 139 (201)
T TIGR01491 66 RLRREEVEEIFKEISLRDYAEELVRWLKEKG---LKTAIVSGGI-MCLAKKVAEKLNP--DYVYSNELVFDEKGFIQPDG 139 (201)
T ss_pred CCCHHHHHHHHHhCCCCccHHHHHHHHHHCC---CEEEEEeCCc-HHHHHHHHHHhCC--CeEEEEEEEEcCCCeEecce
Confidence 3466778777788999999999999999999 9999999995 7888988876 65 468899988864 5555431
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHH
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGS 512 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~ 512 (563)
. ......+|...++++++..+.+ +.+++|||||.+|++|+..||+++++++++.|+++++
T Consensus 140 ~-~~~~~~~k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~ 199 (201)
T TIGR01491 140 I-VRVTFDNKGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAK 199 (201)
T ss_pred e-eEEccccHHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhcc
Confidence 1 1123456888888888776653 4689999999999999999999999998888887775
No 25
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.70 E-value=1.2e-16 Score=151.04 Aligned_cols=184 Identities=17% Similarity=0.219 Sum_probs=130.7
Q ss_pred CCCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCcccc
Q 008499 261 GDRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVE 340 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~ 340 (563)
..|++++||||.||.+.||..-+.+... .......+.++|-++
T Consensus 11 ~~ril~~FDFD~TIid~dSD~wVv~~lp----------------------~~~l~~qL~~t~p~~--------------- 53 (256)
T KOG3120|consen 11 SPRILLVFDFDRTIIDQDSDNWVVDELP----------------------TTDLFNQLRDTYPKG--------------- 53 (256)
T ss_pred CCcEEEEEecCceeecCCcchHHHHhcc----------------------cchhHHHHHHhcccc---------------
Confidence 4799999999999999999888777551 111223333333211
Q ss_pred CCCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh
Q 008499 341 NFNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL 420 (563)
Q Consensus 341 ~~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~ 420 (563)
+|+....||.+.--=+|++.++|++..+.+++.||+.++++.+.+.|. .++.|||+. +..|
T Consensus 54 ----------------~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~lik~~ak~g~--~eliIVSDa-NsfF 114 (256)
T KOG3120|consen 54 ----------------FWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVRLIKSAAKLGC--FELIIVSDA-NSFF 114 (256)
T ss_pred ----------------hHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHHHHHHHHhCCC--ceEEEEecC-chhH
Confidence 223333333332112688999999999999999999999999999882 599999998 7899
Q ss_pred hHHHHhC-CCC--cceEEeeccEecC-ccccC-cc----cc-cCCCCCCcHHHHHHHHHHhCCC--CCccEEEEcCCcCc
Q 008499 421 IRASFSS-GLN--ALNVHANEFSFKE-SISTG-EI----IE-KVESPIDKVQAFNNTLEKYGTD--RKNLSVYIGDSVGD 488 (563)
Q Consensus 421 I~~~L~~-~l~--~~~I~aN~l~~~~-g~~tG-~~----~~-~~~~g~~K~~~l~~~~~~~~~~--~~~~viyiGDs~~D 488 (563)
|+.+|+. ++. ...|++|...++. |.+.= .+ ++ .+....||..+|.++....-.+ .+.++||+|||.||
T Consensus 115 Ie~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD 194 (256)
T KOG3120|consen 115 IEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGAND 194 (256)
T ss_pred HHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCC
Confidence 9999998 654 3489999999985 43211 11 22 3455689999999987643111 24589999999999
Q ss_pred hHHhhh---cCccEEEc
Q 008499 489 LLCLLE---ADIGIVIG 502 (563)
Q Consensus 489 l~~l~~---Ad~givi~ 502 (563)
+|+.+. .| +++.
T Consensus 195 ~CP~l~Lr~~D--~amp 209 (256)
T KOG3120|consen 195 FCPVLRLRACD--VAMP 209 (256)
T ss_pred cCcchhcccCc--eecc
Confidence 998776 45 5554
No 26
>PLN02954 phosphoserine phosphatase
Probab=99.68 E-value=6.1e-16 Score=152.37 Aligned_cols=179 Identities=20% Similarity=0.205 Sum_probs=124.0
Q ss_pred CCeEEeeccccceecccchHHHHHHHHHhCCCCCCCCCcccccccCcccccccHhHhHHHHHHHHHHHHhhcCCCccccC
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIAIVTAPKSDQNQPENQLGRMSSGELRNTWGLLSKQYTEEYEQCIESFMPSEKVEN 341 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~l~~~y~~~~~~~~~~~~p~~~~~~ 341 (563)
...+|+||||||||..|++..+++.. . ..+.|..+.+.|+.+.
T Consensus 11 ~~k~viFDfDGTL~~~~~~~~~~~~~-----g-----------------~~~~~~~~~~~~~~g~--------------- 53 (224)
T PLN02954 11 SADAVCFDVDSTVCVDEGIDELAEFC-----G-----------------AGEAVAEWTAKAMGGS--------------- 53 (224)
T ss_pred cCCEEEEeCCCcccchHHHHHHHHHc-----C-----------------ChHHHHHHHHHHHCCC---------------
Confidence 45688899999999999987777633 1 3345666655554331
Q ss_pred CCHHHHHHHHHhhhHHHHHHHHHHHHhhccCCCCHHHHHHHhcc--CCCCchHHHHHHHHHHcCCCCCcEEEEccccChH
Q 008499 342 FNYETLHKALEQLSHFEKRANSRVIESGVLKGINLEDIKKAGER--LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD 419 (563)
Q Consensus 342 ~~~~~~~~~l~~l~e~e~~s~~rv~~~~~f~Gi~~~~i~~~~~~--i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~ 419 (563)
+++++-... ++ +.++ .+.+++.+..+. ..++||+.++++.++++| ++++|+|+|. ..
T Consensus 54 ~~~~~~~~~-------------~~---~~~~-~~~~~~~~~~~~~~~~l~pg~~e~l~~l~~~g---~~~~IvS~~~-~~ 112 (224)
T PLN02954 54 VPFEEALAA-------------RL---SLFK-PSLSQVEEFLEKRPPRLSPGIPELVKKLRARG---TDVYLVSGGF-RQ 112 (224)
T ss_pred CCHHHHHHH-------------HH---HHcC-CCHHHHHHHHHHccCCCCccHHHHHHHHHHCC---CEEEEECCCc-HH
Confidence 222221110 11 1112 245566665543 568999999999999998 9999999995 88
Q ss_pred hhHHHHhC-CCCcceEEeeccEecC-ccccCcccc-cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 420 LIRASFSS-GLNALNVHANEFSFKE-SISTGEIIE-KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 420 ~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~~~~-~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
+++.+++. |++..++++|.+.+++ |..+|.... ..+.+.+|...++.+....+. .+++|||||.+|+++...++
T Consensus 113 ~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~---~~~i~iGDs~~Di~aa~~~~ 189 (224)
T PLN02954 113 MIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIKKKHGY---KTMVMIGDGATDLEARKPGG 189 (224)
T ss_pred HHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHHHHcCC---CceEEEeCCHHHHHhhhcCC
Confidence 89998887 7765579999999864 666664322 223456799999988876542 57999999999999988855
Q ss_pred ccEEE
Q 008499 497 IGIVI 501 (563)
Q Consensus 497 ~givi 501 (563)
..+++
T Consensus 190 ~~~~~ 194 (224)
T PLN02954 190 ADLFI 194 (224)
T ss_pred CCEEE
Confidence 54444
No 27
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.53 E-value=1.5e-13 Score=133.37 Aligned_cols=120 Identities=23% Similarity=0.291 Sum_probs=95.1
Q ss_pred CCCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-ccccCc
Q 008499 372 KGINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-SISTGE 449 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-g~~tG~ 449 (563)
.|++.+++....+.+.+.||+.++++.++++ +++.|+|++. ..+++.++.+ +++ .+++|.+.+++ +..+|.
T Consensus 53 ~~~~~~~i~~~~~~~~~~pg~~e~L~~L~~~----~~~~IvS~~~-~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~ 125 (205)
T PRK13582 53 HGLGLADIQEVIATLDPLPGAVEFLDWLRER----FQVVILSDTF-YEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGY 125 (205)
T ss_pred cCCCHHHHHHHHHhCCCCCCHHHHHHHHHhc----CCEEEEeCCc-HHHHHHHHHHcCCc--hhhcceEEECCCCeEECc
Confidence 3678999999888999999999999999864 5899999994 8899988887 663 57889988864 445554
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
- ...+.+|...++++... +..++|||||.+|++++..|++|++++++..
T Consensus 126 ~---~~~p~~k~~~l~~~~~~-----~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~ 174 (205)
T PRK13582 126 D---LRQPDGKRQAVKALKSL-----GYRVIAAGDSYNDTTMLGEADAGILFRPPAN 174 (205)
T ss_pred c---ccccchHHHHHHHHHHh-----CCeEEEEeCCHHHHHHHHhCCCCEEECCCHH
Confidence 2 12345788888766532 3679999999999999999999998876543
No 28
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.53 E-value=1.4e-14 Score=138.63 Aligned_cols=99 Identities=25% Similarity=0.339 Sum_probs=76.4
Q ss_pred CCCchHH----HHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC--ccccCcccccCCCCCC
Q 008499 387 SLQDGCT----TFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE--SISTGEIIEKVESPID 459 (563)
Q Consensus 387 ~lrpG~~----efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~--g~~tG~~~~~~~~g~~ 459 (563)
.++||+. ++++.++++| ++++|||+| ...+|+.+++. +++..+|+||++ +++ +..+|++.+..+. +
T Consensus 85 ~~~~~~~~~~~e~i~~~~~~~---~~v~IvS~~-~~~~i~~~~~~~~i~~~~v~~~~~-~~~~~~~~~~~~~~~~~~--~ 157 (192)
T PF12710_consen 85 KLFPGFIPDAMELIRELKDNG---IKVVIVSGS-PDEIIEPIAERLGIDDDNVIGNEL-FDNGGGIFTGRITGSNCG--G 157 (192)
T ss_dssp HHCTTCHTTHHHHHHHHHHTT---SEEEEEEEE-EHHHHHHHHHHTTSSEGGEEEEEE-ECTTCCEEEEEEEEEEES--H
T ss_pred ccCcCchhhHHHHHHHHHHCC---CEEEEECCC-cHHHHHHHHHHcCCCceEEEEEee-eecccceeeeeECCCCCC--c
Confidence 3455555 9999999998 999999999 48899998876 888888999999 754 3456666654333 7
Q ss_pred cHHHHHHHH--HHhCCCCCccEEEEcCCcCchHHhh
Q 008499 460 KVQAFNNTL--EKYGTDRKNLSVYIGDSVGDLLCLL 493 (563)
Q Consensus 460 K~~~l~~~~--~~~~~~~~~~viyiGDs~~Dl~~l~ 493 (563)
|..+++++. ...+. ...+++|||||.||++||+
T Consensus 158 K~~~l~~~~~~~~~~~-~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDI-DPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTH-TCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCC-CCCeEEEEECCHHHHHHhC
Confidence 999999991 11111 2578999999999999985
No 29
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=99.36 E-value=1e-11 Score=135.27 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=91.7
Q ss_pred hccCCCCHHHHHHHhc----c---CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEe
Q 008499 369 GVLKGINLEDIKKAGE----R---LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSF 441 (563)
Q Consensus 369 ~~f~Gi~~~~i~~~~~----~---i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~ 441 (563)
..|+|++.+++.+.++ + -.++|...+.+ +++| ..+|||++. ..+++.+.+.-++...|+|++++.
T Consensus 85 ~~f~G~~~~el~~~~r~~l~~f~~~~l~~~a~~~~---~~~g----~~vvVSASp-~~~Vepfa~~~LGid~VIgTeLev 156 (497)
T PLN02177 85 IAFAGLKIRDIELVSRSVLPKFYAEDVHPETWRVF---NSFG----KRYIITASP-RIMVEPFVKTFLGADKVLGTELEV 156 (497)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHhcCHHHHHHH---HhCC----CEEEEECCc-HHHHHHHHHHcCCCCEEEecccEE
Confidence 4589999999977763 2 23666655544 4555 349999973 555665554435556899999999
Q ss_pred -cCccccCccccc-CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 442 -KESISTGEIIEK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 442 -~~g~~tG~~~~~-~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+|.+||.+.+. +|.|..|.+++++... .+ ...+++|||.||++||..|+.+++++++
T Consensus 157 ~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g---~~--~~~~aYgDS~sD~plL~~a~e~y~V~~~ 216 (497)
T PLN02177 157 SKSGRATGFMKKPGVLVGDHKRDAVLKEFG---DA--LPDLGLGDRETDHDFMSICKEGYMVPRT 216 (497)
T ss_pred CcCCEEeeeecCCCCCccHHHHHHHHHHhC---CC--CceEEEECCccHHHHHHhCCccEEeCCC
Confidence 489999999987 5789999999985442 21 1238999999999999999999999863
No 30
>PRK08238 hypothetical protein; Validated
Probab=99.13 E-value=7.5e-10 Score=120.67 Aligned_cols=115 Identities=18% Similarity=0.173 Sum_probs=91.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.++++||+.++++.++++| .+++|+|++ ...+++.++++ |+ ...|+|.+.. .++.+..|...
T Consensus 70 ~lp~~pga~e~L~~lk~~G---~~v~LaTas-~~~~a~~i~~~lGl-Fd~Vigsd~~------------~~~kg~~K~~~ 132 (479)
T PRK08238 70 TLPYNEEVLDYLRAERAAG---RKLVLATAS-DERLAQAVAAHLGL-FDGVFASDGT------------TNLKGAAKAAA 132 (479)
T ss_pred hCCCChhHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCC-CCEEEeCCCc------------cccCCchHHHH
Confidence 4579999999999999999 999999998 47777877766 54 3456665421 12445568777
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecC
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~ 522 (563)
+.+.... ..++|+|||.+|+++++.|+.++++++++.|++.+++.||+..-+.
T Consensus 133 l~~~l~~------~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~~a~~~~~~~~~~~ 185 (479)
T PRK08238 133 LVEAFGE------RGFDYAGNSAADLPVWAAARRAIVVGASPGVARAARALGPVERVFP 185 (479)
T ss_pred HHHHhCc------cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHHHHHHcCCcceecC
Confidence 7655431 3478999999999999999999999999999999999999877664
No 31
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.96 E-value=5.1e-08 Score=95.74 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=70.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...+.||+.++++.++++| ++++|+|++. ...++..++. ++... + + ...++. ....+.-|...
T Consensus 91 ~~~~~~g~~~~l~~l~~~g---~~~~i~S~~~-~~~~~~~l~~~~l~~~--f------~-~~~~~~---~~~~~kp~~~~ 154 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAG---YPLAVVTNKP-TPFVAPLLEALGIADY--F------S-VVIGGD---SLPNKKPDPAP 154 (226)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCCccC--c------c-EEEcCC---CCCCCCcChHH
Confidence 4679999999999999988 9999999995 6777787776 54311 0 0 011111 01112224567
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
++.+++..+.. +.++++||||.+|+.++..+|+ +|.+
T Consensus 155 ~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v 192 (226)
T PRK13222 155 LLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGV 192 (226)
T ss_pred HHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEE
Confidence 77777777653 5789999999999999999998 4444
No 32
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=98.90 E-value=1.3e-07 Score=91.32 Aligned_cols=103 Identities=14% Similarity=0.116 Sum_probs=73.8
Q ss_pred HHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCC
Q 008499 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESP 457 (563)
Q Consensus 381 ~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g 457 (563)
+....+.+.||+.++++.++++| ++++|+|.+ +...++..++. |+. ...|++.+- .|. .
T Consensus 86 ~~~~~~~~~~~~~~~L~~L~~~g---~~~~i~Sn~-~~~~~~~~l~~~gl~~~fd~i~~s~~-------~~~-------~ 147 (198)
T TIGR01428 86 EAYLRLPPHPDVPAGLRALKERG---YRLAILSNG-SPAMLKSLVKHAGLDDPFDAVLSADA-------VRA-------Y 147 (198)
T ss_pred HHHhcCCCCCCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHCCChhhhheeEehhh-------cCC-------C
Confidence 33456889999999999999998 999999998 57888888876 652 122333221 111 1
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
--+...+...++..+.. +.++++|||+.+|+.+...+|+ .|.+.
T Consensus 148 KP~~~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~ 192 (198)
T TIGR01428 148 KPAPQVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVN 192 (198)
T ss_pred CCCHHHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEec
Confidence 11346677777777653 5789999999999999999998 44443
No 33
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.90 E-value=3.4e-08 Score=97.24 Aligned_cols=102 Identities=16% Similarity=0.160 Sum_probs=72.9
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
....+.||+.++++.++++| ++++|+|++ +...++..++. ++.. .+..- .++. ....+.-+..
T Consensus 89 ~~~~~~~g~~~~l~~l~~~g---~~~~i~S~~-~~~~~~~~l~~~~l~~--~f~~~-------~~~~---~~~~~Kp~~~ 152 (222)
T PRK10826 89 ETRPLLPGVREALALCKAQG---LKIGLASAS-PLHMLEAVLTMFDLRD--YFDAL-------ASAE---KLPYSKPHPE 152 (222)
T ss_pred cCCCCCCCHHHHHHHHHHCC---CeEEEEeCC-cHHHHHHHHHhCcchh--cccEE-------EEcc---cCCCCCCCHH
Confidence 35789999999999999999 999999998 57778888776 5422 11111 1111 0112223456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.++..++..+.. +.++++||||.+|+.++..||+..+..
T Consensus 153 ~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v 191 (222)
T PRK10826 153 VYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVV 191 (222)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence 778888877763 578999999999999999999954443
No 34
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.90 E-value=8e-09 Score=91.72 Aligned_cols=110 Identities=14% Similarity=0.044 Sum_probs=75.5
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CC--CcceEEeeccEecC-ccccCcc-cccCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GL--NALNVHANEFSFKE-SISTGEI-IEKVESP 457 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l--~~~~I~aN~l~~~~-g~~tG~~-~~~~~~g 457 (563)
.....++||+.++++.++++| .+++|+|+++ ...++..++. ++ ....+++....... +...+.. ...+..+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g---~~i~ivS~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKG---IKLALATNKS-RREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCC---CeEEEEeCch-HHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccC
Confidence 445788999999999999998 9999999996 7788888876 54 22345544432211 1111111 1234445
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
..|...++.+....+.. ...+++||||.+|+.++..++.
T Consensus 96 ~~~~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~ 134 (139)
T cd01427 96 KPNPDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGG 134 (139)
T ss_pred CCCHHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCC
Confidence 56777777777765542 5789999999999999999764
No 35
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.89 E-value=4.7e-08 Score=95.17 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=71.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|++ +...++..++. ++.. ..+++.+ ....+--+.
T Consensus 83 ~~~~~~g~~~~L~~l~~~g---~~~~i~S~~-~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp~p 144 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKG---LRLGLVTNK-PTPLARPLLELLGLAKYFSVLIGGD--------------SLAQRKPHP 144 (213)
T ss_pred cCccCCCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHcCcHhhCcEEEecC--------------CCCCCCCCh
Confidence 4689999999999999988 999999998 57788888876 5421 1222211 011122245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
..+...++..+.. +.++++||||.+|+.++..||+.++
T Consensus 145 ~~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i 182 (213)
T TIGR01449 145 DPLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSV 182 (213)
T ss_pred HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEE
Confidence 6777788777653 5789999999999999999998543
No 36
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.86 E-value=7.3e-08 Score=94.22 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=69.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|++. ...++..|+. |+.. ..|++-+ - ...+.-|.
T Consensus 80 ~~~~~~g~~~~l~~L~~~g---~~~~i~S~~~-~~~~~~~l~~~gl~~~f~~i~~~~-----------~---~~~~Kp~p 141 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQG---YKLGIVTTKM-RDTVEMGLKLTGLDEFFDVVITLD-----------D---VEHAKPDP 141 (214)
T ss_pred hcccCcCHHHHHHHHHHCC---CeEEEEeCCC-HHHHHHHHHHcCChhceeEEEecC-----------c---CCCCCCCc
Confidence 4678999999999999998 9999999984 7778888876 5532 1222211 0 01122355
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+.+++...+.. +.+++|||||.+|+.+.+.||+.
T Consensus 142 ~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 142 EPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence 6777777776653 57899999999999999999984
No 37
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.84 E-value=7.7e-08 Score=94.38 Aligned_cols=97 Identities=14% Similarity=0.111 Sum_probs=71.6
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC----cceEEeeccEecCccccCcccccCCCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN----ALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~----~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.||+.++++.++++| +++.|+|++ +...++..|+. ++. ...++|.. .. ..+--
T Consensus 85 ~~~l~~G~~~~L~~L~~~g---~~~~ivT~~-~~~~~~~~l~~~~l~~~~~f~~i~~~~-----~~---------~~~KP 146 (220)
T TIGR03351 85 PPVALPGAEEAFRSLRSSG---IKVALTTGF-DRDTAERLLEKLGWTVGDDVDAVVCPS-----DV---------AAGRP 146 (220)
T ss_pred CCccCCCHHHHHHHHHHCC---CEEEEEeCC-chHHHHHHHHHhhhhhhccCCEEEcCC-----cC---------CCCCC
Confidence 4689999999999999998 999999988 57888888876 543 12233321 10 11112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
+...+...+.+.+...+.++++|||+.+|+.+.+.||+.+
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 5567777777776532468999999999999999999976
No 38
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.82 E-value=2.2e-07 Score=92.02 Aligned_cols=97 Identities=18% Similarity=0.191 Sum_probs=69.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc-c-eEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA-L-NVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~-~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.|+++| +++.|+|.+ +...+...+.. ++.. . .|++.+ . .+ .+--+.
T Consensus 93 ~~~~~pg~~~~L~~L~~~g---~~l~i~Tn~-~~~~~~~~l~~~~l~~~f~~i~~~~-----~--~~-------~~KP~p 154 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAG---CVWGIVTNK-PEYLARLILPQLGWEQRCAVLIGGD-----T--LA-------ERKPHP 154 (229)
T ss_pred cCeeCCCHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCchhcccEEEecC-----c--CC-------CCCCCH
Confidence 5789999999999999998 999999988 67777777765 5422 1 111111 0 01 122245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
..+...++..+.+ +.++++||||.+|+.+.+.||+..+
T Consensus 155 ~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 155 LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEE
Confidence 6677777777763 5789999999999999999998533
No 39
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.82 E-value=1.2e-07 Score=92.04 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=72.1
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..+.+.||+.+++++++++| ++++|+|++ +...++..+.. ++.. ..+++.+ . ...+.-|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g---~~~~i~Sn~-~~~~~~~~l~~~~l~~~f~~i~~~~----------~----~~~~KP~ 133 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADG---VGTAIATGK-SGPRARSLLEALGLLPLFDHVIGSD----------E----VPRPKPA 133 (205)
T ss_pred cccccCCCHHHHHHHHHHCC---CeEEEEeCC-chHHHHHHHHHcCChhheeeEEecC----------c----CCCCCCC
Confidence 46789999999999999998 999999998 57778877776 5532 1222211 0 1112235
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
...+...+++.+.+ +.++++||||.+|+.+++.+|+.++
T Consensus 134 ~~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i 172 (205)
T TIGR01454 134 PDIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATV 172 (205)
T ss_pred hHHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEE
Confidence 67778888777653 5789999999999999999998543
No 40
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.80 E-value=1.1e-07 Score=96.27 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=70.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|.+ +...++..|+. ++.. ..|++.+ .+..+--+.
T Consensus 107 ~~~l~pg~~e~L~~L~~~g---~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~ii~~~--------------d~~~~KP~P 168 (260)
T PLN03243 107 LYRLRPGSREFVQALKKHE---IPIAVASTR-PRRYLERAIEAVGMEGFFSVVLAAE--------------DVYRGKPDP 168 (260)
T ss_pred CcccCCCHHHHHHHHHHCC---CEEEEEeCc-CHHHHHHHHHHcCCHhhCcEEEecc--------------cCCCCCCCH
Confidence 4678999999999999998 999999998 67888888876 5532 2232221 011112234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+...+.. ...+++||||.+|+.+.+.||+.+
T Consensus 169 e~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 169 EMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred HHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEE
Confidence 5666777776653 578999999999999999999843
No 41
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.72 E-value=4.9e-07 Score=92.04 Aligned_cols=95 Identities=12% Similarity=0.153 Sum_probs=68.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| ++++|+|++ +...++..++. ++.. ..|++.+ - ...+--+.
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g---~~l~ivTn~-~~~~~~~~l~~~~i~~~f~~i~~~d-----------~---~~~~Kp~p 160 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQG---VEMALITNK-PERFVAPLLDQMKIGRYFRWIIGGD-----------T---LPQKKPDP 160 (272)
T ss_pred CCccCCCHHHHHHHHHHCC---CeEEEEECC-cHHHHHHHHHHcCcHhhCeEEEecC-----------C---CCCCCCCc
Confidence 4678999999999999988 999999988 57777777765 4421 1122111 0 11122344
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+..+++..+.+ +.++++|||+.+|+.+...+++.
T Consensus 161 ~~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 161 AALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred HHHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCe
Confidence 6777777777653 57899999999999999999983
No 42
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.72 E-value=3.4e-07 Score=91.97 Aligned_cols=97 Identities=12% Similarity=0.018 Sum_probs=69.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
+...+.||+.++|+.|+++| +++.|+|++ +...++.+|+. ++.. ..|++.+ . +..+--
T Consensus 96 ~~~~~~pg~~e~L~~L~~~g---~~l~IvT~~-~~~~~~~~l~~~gl~~~f~d~ii~~~-----~---------~~~~KP 157 (253)
T TIGR01422 96 EYSSPIPGVIEVIAYLRARG---IKIGSTTGY-TREMMDVVAPEAALQGYRPDYNVTTD-----D---------VPAGRP 157 (253)
T ss_pred hcCccCCCHHHHHHHHHHCC---CeEEEECCC-cHHHHHHHHHHHHhcCCCCceEEccc-----c---------CCCCCC
Confidence 35789999999999999998 999999998 68888888876 5422 1222211 0 001112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
+...+...++..+...+..+++||||.+|+.+.+.|++.
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 345666666666653246899999999999999999983
No 43
>PRK11587 putative phosphatase; Provisional
Probab=98.69 E-value=3.6e-07 Score=89.72 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=67.5
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc-ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA-LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~-~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
+.+.+.||+.++++.|+++| +++.|+|.+ +...+...+.. ++.. ..|++.+ .+ ...--+.
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g---~~~~ivTn~-~~~~~~~~l~~~~l~~~~~i~~~~----------~~----~~~KP~p 141 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLG---IPWAIVTSG-SVPVASARHKAAGLPAPEVFVTAE----------RV----KRGKPEP 141 (218)
T ss_pred cCceeCcCHHHHHHHHHHcC---CcEEEEcCC-CchHHHHHHHhcCCCCccEEEEHH----------Hh----cCCCCCc
Confidence 45789999999999999999 999999998 45556655554 4421 1222211 00 0111133
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
..+...+...+.. +.++++||||.+|+.+...||+. |.+.
T Consensus 142 ~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 142 DAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred HHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 4555556666653 57899999999999999999984 4443
No 44
>PRK05157 pyrroloquinoline quinone biosynthesis protein PqqC; Provisional
Probab=98.69 E-value=3.1e-06 Score=83.65 Aligned_cols=205 Identities=14% Similarity=0.093 Sum_probs=140.0
Q ss_pred CCCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 008499 8 SPSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISEL 87 (563)
Q Consensus 8 ~~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~ 87 (563)
.++-....|.+.|-..- ....++|||-+.+.+|+|+++.++.|..|=|+|-..+.+..+-++++++|.+.++.+.+.
T Consensus 6 ~~~~s~~eF~~~L~~~~---~~yh~~HPF~~~~~~Gklt~~qlq~wa~nrYyyq~~~P~kdaaI~S~c~D~e~Rr~w~~r 82 (246)
T PRK05157 6 AALLSPEEFEAALRAIG---ARYHIHHPFHRLLHEGKLTREQIQAWVANRFYYQINIPLKDAAILSNCPDRETRREWRQR 82 (246)
T ss_pred cCCCCHHHHHHHHHHHH---HhhcccChHHHHHHcCCCCHHHHHHHHHHhchhhccchHHHHHHHHcCCCHHHHHHHHHH
Confidence 33445556777766544 123358999999999999999999999999999999999999999999999987654333
Q ss_pred HHHHHH-H--------HHHHHHHHHHhCCCccc--cc-CCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHH
Q 008499 88 RKGVLE-E--------LKMHDSFVKEWGTDLAK--MA-TVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAY 155 (563)
Q Consensus 88 ~~~i~~-E--------~~~h~~~~~~~gi~~~~--~~-~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~ 155 (563)
|.+ | +++...+++..|++.++ +. ...|+|+..++-....+.... | .+
T Consensus 83 ---i~d~dG~~~~~ghie~Wlrf~ealGl~re~v~s~~~~lP~tr~aVday~~~~r~~~------------~------~e 141 (246)
T PRK05157 83 ---ILDHDGDGGGEGGIERWLRLGEAVGLDRDYVLSLRGVLPGVRFAVDAYVNFARRAP------------W------LE 141 (246)
T ss_pred ---HHHhcCCCCCCCcHHHHHHHHHHcCCCHHHHhccccCChHHHHHHHHHHHHHccCC------------H------HH
Confidence 332 2 57888999999999873 33 478999999998888885332 2 46
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHH-------H-HHHHHHHhhccCCHHHHHHHHH
Q 008499 156 TLGAMSPCMRLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASAL-------Q-NEDLLDKLSVSLTGEELDIIEK 227 (563)
Q Consensus 156 ~l~Al~pC~~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~-------~-l~~~ld~~~~~~~~~~~~~~~~ 227 (563)
++++++. +.-=-.|.+...... ..+..|++.=+=.=|..... . +..+++.+ .++++++++.+
T Consensus 142 avas~lt-E~~~P~I~~~ri~gl------~~~Y~~~~~e~l~yF~~h~~~a~~Dvehal~~~l~~~---~t~e~q~~al~ 211 (246)
T PRK05157 142 AVASSLT-ELFAPQIHQERLAGW------PEHYPWIDPEGLAYFRSRLTQAPRDVEHGLAYVLDHA---TTREQQERALE 211 (246)
T ss_pred HHHHHHH-HHhhhHHHHHHHHHH------HHHCCCCCHHHHHHHHHHhhccchhHHHHHHHHHHHc---CCHHHHHHHHH
Confidence 6777776 544344433222211 11224554211111221111 1 22334443 37789999999
Q ss_pred HHHHHHHHHHHhhccCCCC
Q 008499 228 LYHQAMKLEVEFFCAQPLA 246 (563)
Q Consensus 228 ~f~~~~~lE~~Fw~~a~~~ 246 (563)
+-...|..=|.|+|+....
T Consensus 212 al~~k~d~Lw~~LDai~~a 230 (246)
T PRK05157 212 ALQFKLDVLWSMLDALYMA 230 (246)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988443
No 45
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.69 E-value=1e-06 Score=89.43 Aligned_cols=97 Identities=9% Similarity=0.007 Sum_probs=68.7
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
+.+.+.||+.++|+.|+++| +++.|+|++ +...++.+|+. ++.+ ..|++.+ . ...+--
T Consensus 98 ~~~~~~pg~~elL~~L~~~g---~~l~I~T~~-~~~~~~~~l~~~~l~~~~~d~i~~~~-----~---------~~~~KP 159 (267)
T PRK13478 98 DYATPIPGVLEVIAALRARG---IKIGSTTGY-TREMMDVVVPLAAAQGYRPDHVVTTD-----D---------VPAGRP 159 (267)
T ss_pred hcCCCCCCHHHHHHHHHHCC---CEEEEEcCC-cHHHHHHHHHHHhhcCCCceEEEcCC-----c---------CCCCCC
Confidence 35788999999999999998 999999988 57777777765 3321 1222211 0 011112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
+...+...+.+.+......+++||||.+|+.+...||+.
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 346677777777653346799999999999999999983
No 46
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.69 E-value=2e-07 Score=94.94 Aligned_cols=95 Identities=22% Similarity=0.342 Sum_probs=70.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.+.||+.++++.|+++| +++.|+|.+ +...+...|+. |+... +.. +.++... ..|..
T Consensus 139 ~~~~l~pg~~e~L~~L~~~g---i~laIvSn~-~~~~~~~~L~~~gl~~~------F~~---vi~~~~~------~~k~~ 199 (273)
T PRK13225 139 PALQLFPGVADLLAQLRSRS---LCLGILSSN-SRQNIEAFLQRQGLRSL------FSV---VQAGTPI------LSKRR 199 (273)
T ss_pred ccCCcCCCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHcCChhh------eEE---EEecCCC------CCCHH
Confidence 35788999999999999998 999999998 58888888876 65321 100 1111110 12567
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
.+..++.+.+.. +.++++||||.+|+.+...|++-
T Consensus 200 ~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 200 ALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLI 234 (273)
T ss_pred HHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCe
Confidence 777777776653 47899999999999999999983
No 47
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.69 E-value=4e-07 Score=96.08 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=70.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++|+.|+++| +++.|+|.+ ....++..|+. |+.. ..|++-+- ...+--+.
T Consensus 214 ~~~l~pGa~ElL~~Lk~~G---iklaIaSn~-~~~~~~~~L~~lgL~~yFd~Iv~sdd--------------v~~~KP~P 275 (381)
T PLN02575 214 IYRLRTGSQEFVNVLMNYK---IPMALVSTR-PRKTLENAIGSIGIRGFFSVIVAAED--------------VYRGKPDP 275 (381)
T ss_pred CCCcCcCHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHcCCHHHceEEEecCc--------------CCCCCCCH
Confidence 4678999999999999999 999999988 57888888886 6532 22222110 00112244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+.......+. .+.++++||||.+|+.+...|++.+
T Consensus 276 eifl~A~~~lgl-~Peecl~IGDS~~DIeAAk~AGm~~ 312 (381)
T PLN02575 276 EMFIYAAQLLNF-IPERCIVFGNSNQTVEAAHDARMKC 312 (381)
T ss_pred HHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHcCCEE
Confidence 566667776665 3578999999999999999999943
No 48
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.68 E-value=6.1e-07 Score=87.91 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=69.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.|+++| +++.|+|.+. ...+...++. ++.. ..|++.+- .| .+--+.
T Consensus 92 ~~~~~~g~~~~L~~L~~~g---~~~~i~Tn~~-~~~~~~~l~~~~l~~~f~~i~~~~~-------~~-------~~KP~~ 153 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESG---YRLGIITDGL-PVKQWEKLERLGVRDFFDAVITSEE-------EG-------VEKPHP 153 (221)
T ss_pred hCCCCCCHHHHHHHHHHCC---CEEEEEeCCc-hHHHHHHHHhCChHHhccEEEEecc-------CC-------CCCCCH
Confidence 5789999999999999998 9999999984 6666667765 5431 12222210 11 111244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
..+...+++.+.+ +.++++||||. +|+.+.+.+|+ .|.+.
T Consensus 154 ~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 5677777777653 47899999998 99999999998 44443
No 49
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=98.67 E-value=1.8e-06 Score=83.62 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+.||+.++++.++++| +++.|+|.+ .. .+...|+. ++.. ..|++.. ..| .+--+..
T Consensus 104 ~~~~~g~~~~l~~L~~~g---~~~~i~Sn~-~~-~~~~~l~~~~l~~~fd~i~~s~-------~~~-------~~KP~~~ 164 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERG---LILGVISNF-DS-RLRGLLEALGLLEYFDFVVTSY-------EVG-------AEKPDPK 164 (203)
T ss_pred ceeCcCHHHHHHHHHHCC---CEEEEEeCC-ch-hHHHHHHHCCcHHhcceEEeec-------ccC-------CCCCCHH
Confidence 468899999999999988 999999976 33 35666665 4421 1222211 011 1111335
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCcc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG 498 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g 498 (563)
.+...++..+. .+.++++|||+. +|+.+...+|+.
T Consensus 165 ~~~~~~~~~~~-~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGI-SPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCC-ChhHEEEECCCchHHHHHHHHcCCe
Confidence 66777776665 357899999997 899999999864
No 50
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=98.64 E-value=6e-07 Score=83.48 Aligned_cols=96 Identities=21% Similarity=0.312 Sum_probs=72.5
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCCCCc
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
....+.||+.++++.++++| ++++|+|.+ +...++..++. ++. ...|++.. .......+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~---~~~~i~Sn~-~~~~~~~~l~~~~~~~~f~~i~~~~--------------~~~~~Kp~ 135 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKG---IPLVIVSNG-SRERIERVLERLGLDDYFDEIISSD--------------DVGSRKPD 135 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTT---SEEEEEESS-EHHHHHHHHHHTTHGGGCSEEEEGG--------------GSSSSTTS
T ss_pred hccchhhhhhhhhhhccccc---ceeEEeecC-Ccccccccccccccccccccccccc--------------hhhhhhhH
Confidence 46899999999999999888 999999988 78888888876 543 12233221 01111234
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
...++.+++..+. .+.++++|||+..|+.+.+.+|+.
T Consensus 136 ~~~~~~~~~~~~~-~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 136 PDAYRRALEKLGI-PPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHHTS-SGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHcCC-CcceEEEEeCCHHHHHHHHHcCCe
Confidence 5778888887776 358899999999999999999973
No 51
>COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C [Coenzyme metabolism]
Probab=98.64 E-value=6.2e-06 Score=79.80 Aligned_cols=185 Identities=15% Similarity=0.141 Sum_probs=133.3
Q ss_pred hcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH---HHHH---HHHHHHHHHHHh
Q 008499 32 MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK---GVLE---ELKMHDSFVKEW 105 (563)
Q Consensus 32 ~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~---~i~~---E~~~h~~~~~~~ 105 (563)
..|||.+.+.+|.|+++.++-|++.-++|+++|...++..+++++|++..+...+.+. +..+ =+++-..++..+
T Consensus 25 ~~HpF~~~m~~g~lt~~ql~~yvi~~~~~~k~~p~~lSail~rcdd~~~r~~~leni~de~~g~~e~~hidlwlr~aeAl 104 (242)
T COG5424 25 LPHPFYVAMQEGELTKEQLQGYVINRYYYQKNFPLYLSAILARCDDDDVRREWLENIMDEDNGYNEPNHIDLWLRLAEAL 104 (242)
T ss_pred CCCHHHHHHHccCCCHHHHHHHHHhhhHHHHhhhHHHHHHHhcCCcHhHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHc
Confidence 7899999999999999999999999999999999999999999999987654433321 1111 246667788999
Q ss_pred CCCccc--ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008499 106 GTDLAK--MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALLNANEG 183 (563)
Q Consensus 106 gi~~~~--~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~~~~~~~~~~ 183 (563)
|++.++ +..|+|+++.=++.....+..+. .++++++|+.-+..=..|. ..... .
T Consensus 105 Gvs~eei~s~eplp~~~~av~~~~~~a~~~s------------------~~~~~aslyt~El~apri~---~~ki~---g 160 (242)
T COG5424 105 GVSREEILSHEPLPSTRFAVDTWVRFATEKS------------------WLEGAASLYTYELVAPRIS---VEKIS---G 160 (242)
T ss_pred CCCHHHHhhcCCCHHHHHHHHHHHHHhcchh------------------HHHHHHHHHHHHhhccHHH---HHHcc---C
Confidence 999983 55699999999999888886543 3567777766554333332 22221 2
Q ss_pred cccccccccccCC--------hhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccC
Q 008499 184 NHPYTKWIDNYSS--------ESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQ 243 (563)
Q Consensus 184 ~~~y~~Wi~~y~s--------~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a 243 (563)
-+.|..|++ +.. +.-...+....+++.+++. +.|..+++..+-.+++..=+.|-|+.
T Consensus 161 l~~~~~~~~-~a~~~yf~~h~eaD~~Ha~Ealkiv~~~~~--t~E~~~~~~~~~~~~~D~lw~fLda~ 225 (242)
T COG5424 161 LPYFNGFSD-AAAYAYFREHLEADVRHAEEALKIVLELAG--TRELQDQVLDALQKSLDVLWLFLDAR 225 (242)
T ss_pred chhhcCcch-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554 111 1224455566666666652 45777888999999999999999976
No 52
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.62 E-value=1.1e-06 Score=86.86 Aligned_cols=98 Identities=17% Similarity=0.236 Sum_probs=71.8
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.+.||+.++++.++++| +++.|+|.+ +...++..++. ++.. ..|++.+- .| .+--
T Consensus 89 ~~~~~~~~g~~e~L~~Lk~~g---~~~~i~Tn~-~~~~~~~~l~~~~l~~~fd~iv~s~~-------~~-------~~KP 150 (224)
T PRK14988 89 GPRAVLREDTVPFLEALKASG---KRRILLTNA-HPHNLAVKLEHTGLDAHLDLLLSTHT-------FG-------YPKE 150 (224)
T ss_pred hccCCcCCCHHHHHHHHHhCC---CeEEEEeCc-CHHHHHHHHHHCCcHHHCCEEEEeee-------CC-------CCCC
Confidence 456889999999999999999 999999998 67888887775 5421 23333321 01 1112
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
+...+...+++.+. .+.++++||||.+|+.+...||+..
T Consensus 151 ~p~~~~~~~~~~~~-~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 151 DQRLWQAVAEHTGL-KAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 35667777777665 3578999999999999999999853
No 53
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.61 E-value=8.7e-07 Score=88.96 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=70.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|.+ +...++..|+. ++.. ..|++.+- ...+--+.
T Consensus 106 ~~~l~pgv~e~L~~L~~~g---~~l~I~Tn~-~~~~~~~~l~~~gl~~~Fd~iv~~~~--------------~~~~KP~p 167 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRG---LKRAAVTNA-PRENAELMISLLGLSDFFQAVIIGSE--------------CEHAKPHP 167 (248)
T ss_pred cCCcCccHHHHHHHHHHcC---CeEEEEeCC-CHHHHHHHHHHcCChhhCcEEEecCc--------------CCCCCCCh
Confidence 5789999999999999998 999999998 57888888876 5532 22333221 00111233
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+++.+.. +.+++||||+.+|+.+.+.|++.+
T Consensus 168 ~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 168 DPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred HHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEE
Confidence 5566666666653 578999999999999999999843
No 54
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.59 E-value=6.5e-07 Score=85.05 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=65.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.++++| +++.|+|++ ..++..|+. ++.. ..|++..- .+ ....+.
T Consensus 86 ~~~~~~g~~~~l~~l~~~g---~~i~i~S~~---~~~~~~l~~~~l~~~f~~v~~~~~-------~~-------~~kp~~ 145 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKG---IAVGLGSSS---KNADRILAKLGLTDYFDAIVDADE-------VK-------EGKPHP 145 (185)
T ss_pred CCCCCcCHHHHHHHHHHcC---CeEEEEeCc---hhHHHHHHHcChHHHCCEeeehhh-------CC-------CCCCCh
Confidence 4789999999999999988 999999976 456777765 5421 12222110 00 111233
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+++.+.. +.++++||||.+|+.+...+++..
T Consensus 146 ~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 146 ETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeE
Confidence 4556666666653 578999999999999999999753
No 55
>TIGR02111 PQQ_syn_pqqC coenzyme PQQ biosynthesis protein C. This model describes the coenzyme PQQ (pyrrolo-quinoline-quinone) biosynthesis protein PqqC.In contrast to the broader model pfam05312, this model does not include related proteins likely to be functionally distinct from PqqC, such as homologs found in the Chlamydias.
Probab=98.59 E-value=4.3e-06 Score=81.95 Aligned_cols=185 Identities=13% Similarity=0.083 Sum_probs=128.8
Q ss_pred hhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH---------HHHHHHH
Q 008499 31 AMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLEE---------LKMHDSF 101 (563)
Q Consensus 31 ~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E---------~~~h~~~ 101 (563)
..+|||-+.+.+|+|+++.++.|..|=|+|-..+.+..+-++++++|.+.++.+... +.+| .++...+
T Consensus 19 h~~HPF~~~~~~GkLt~~ql~~wa~nrYyyq~~iP~kdAAi~s~c~D~e~Rr~wl~r---i~DhdG~~~~~ggie~Wlrf 95 (239)
T TIGR02111 19 HDLHPFHALLHDGKLTRDQVQAWVLNRYYYQANIPLKDAAILARCPDPQLRRIWRQR---ILDHDGDHEEDGGIERWLRL 95 (239)
T ss_pred cccCcHHHHHhcCCCCHHHHHHHHHHhhhhhhcccHHHHHHHHcCCCHHHHHHHHHH---HHHhcCCCCCCCcHHHHHHH
Confidence 468999999999999999999999999999988999999999999999987665333 3332 5788899
Q ss_pred HHHhCCCccc---ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008499 102 VKEWGTDLAK---MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYAFLGKEFHALL 178 (563)
Q Consensus 102 ~~~~gi~~~~---~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~~ig~~~~~~~ 178 (563)
++..|++.+. .....|+|+..++-....+.... | .++++|++. +.-=-.|.+.-....
T Consensus 96 aealGl~re~v~s~~~~lP~trfaVday~~f~r~~~------------~------~eavasslT-E~f~P~I~~~ri~gl 156 (239)
T TIGR02111 96 AEAVGLDREYVLSTRGVLPGTRFAVDAYVHFVREKS------------L------LEAIASSLT-ELFAPQIHSERVAGM 156 (239)
T ss_pred HHHhCCCHHHHhcccCCCHHHHHHHHHHHHHHhcCC------------H------HHHHHHHHH-HHHhHHHHHHHHHhH
Confidence 9999999873 33348999988887777765222 2 467888766 554444443222211
Q ss_pred cCCCCcccccccccccCChhHHHHHH-HHHHH-------HHHhhccCCHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 008499 179 NANEGNHPYTKWIDNYSSESFQASAL-QNEDL-------LDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCAQPLA 246 (563)
Q Consensus 179 ~~~~~~~~y~~Wi~~y~s~~f~~~v~-~l~~~-------ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~a~~~ 246 (563)
..+..|++.=+=.=|..... .-++. ++.+ .++++.+++.++-...|..=|.|+|+....
T Consensus 157 ------~~~Y~~~~~e~l~yF~~r~~qa~rd~e~~l~~~l~~~---~t~e~Q~~~l~al~fk~dvLw~~LDal~~a 223 (239)
T TIGR02111 157 ------LQHYDFIDDAALAYFRKRLTQAPRDVEFGLDYVLDHA---TTREKQEAALEALTFKCDVLWAQLDALYFA 223 (239)
T ss_pred ------HHHCCCCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234665321111222111 11222 4444 377889999999999999999999987443
No 56
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=98.56 E-value=3.2e-06 Score=81.82 Aligned_cols=108 Identities=12% Similarity=0.127 Sum_probs=72.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.||+.++++.++++| ++++|+|.+ +...+...+.. ++.. ..|++.. .+..+--+.
T Consensus 83 ~~~~~g~~e~L~~l~~~g---~~~~i~Sn~-~~~~~~~~~~~~~~l~~~fd~v~~s~--------------~~~~~KP~p 144 (199)
T PRK09456 83 VALRPEVIAIMHKLREQG---HRVVVLSNT-NRLHTTFWPEEYPEVRAAADHIYLSQ--------------DLGMRKPEA 144 (199)
T ss_pred hccCHHHHHHHHHHHhCC---CcEEEEcCC-chhhHHHHHhhchhHHHhcCEEEEec--------------ccCCCCCCH
Confidence 468999999999999998 999999987 45554443332 2210 1122111 011112245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCChhHHHHHH
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRVGS 512 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~~L~~~~~ 512 (563)
..+...++..+. .+..++||||+..|+.+.+.+|+ .|.+.+...++++.+
T Consensus 145 ~~~~~~~~~~~~-~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 145 RIYQHVLQAEGF-SAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred HHHHHHHHHcCC-ChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 677777777765 35789999999999999999999 566655566665544
No 57
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=98.56 E-value=1.3e-06 Score=82.99 Aligned_cols=93 Identities=13% Similarity=0.137 Sum_probs=63.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++|+.|+++| +++.|+|.++. ....|+. ++.. ..+++.. ......-+.
T Consensus 85 ~~~~~pg~~~~L~~L~~~g---~~~~i~s~~~~---~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp~p 144 (185)
T TIGR01990 85 PADVLPGIKNLLDDLKKNN---IKIALASASKN---APTVLEKLGLIDYFDAIVDPA--------------EIKKGKPDP 144 (185)
T ss_pred CcccCccHHHHHHHHHHCC---CeEEEEeCCcc---HHHHHHhcCcHhhCcEEEehh--------------hcCCCCCCh
Confidence 3578899999999999998 99999998643 2345554 4421 1111111 011112345
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..++..+++.+.+ +.++++|||+.+|+.+...+++.
T Consensus 145 ~~~~~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 145 EIFLAAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCE
Confidence 6677777776653 57899999999999999999984
No 58
>PRK09449 dUMP phosphatase; Provisional
Probab=98.56 E-value=5e-06 Score=81.74 Aligned_cols=98 Identities=17% Similarity=0.315 Sum_probs=68.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.|+ ++ +++.|+|.++ .+.++..|+. |+.. ..|++.+ ..| ..--+.
T Consensus 93 ~~~~~~g~~~~L~~L~-~~---~~~~i~Tn~~-~~~~~~~l~~~~l~~~fd~v~~~~-------~~~-------~~KP~p 153 (224)
T PRK09449 93 ICTPLPGAVELLNALR-GK---VKMGIITNGF-TELQQVRLERTGLRDYFDLLVISE-------QVG-------VAKPDV 153 (224)
T ss_pred cCccCccHHHHHHHHH-hC---CeEEEEeCCc-HHHHHHHHHhCChHHHcCEEEEEC-------ccC-------CCCCCH
Confidence 4679999999999999 56 8999999984 7777777776 5531 1222221 011 111234
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCcc-EEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADIG-IVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~g-ivi 501 (563)
..+...++..+......+++||||. +|+.+.+.||+. |.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~ 195 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWL 195 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEE
Confidence 6677777777643336799999998 799999999984 444
No 59
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.53 E-value=1.3e-06 Score=80.66 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=62.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCC--cceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLN--ALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
.....||+.++++.++++| +++.|+|.+. ...+...++..+. ...|++.+ . .. +.-+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g---~~~~i~T~~~-~~~~~~~~~~~l~~~f~~i~~~~-----~---------~~-~Kp~~~ 122 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAG---IKLGIISNGS-LRAQKLLLRKHLGDYFDLILGSD-----E---------FG-AKPEPE 122 (154)
T ss_pred hheeccCHHHHHHHHHHCc---CeEEEEeCCc-hHHHHHHHHHHHHhcCcEEEecC-----C---------CC-CCcCHH
Confidence 4456699999999999988 9999999985 6666666553111 11122211 0 11 223457
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
.+..++.+.+.+ + ++++|||+.+|+.+.+.|+
T Consensus 123 ~~~~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 778888777764 4 8999999999999998875
No 60
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.52 E-value=2.4e-06 Score=84.15 Aligned_cols=93 Identities=17% Similarity=0.213 Sum_probs=68.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
..+-||..+.+..++++| +++.|+|.. +...++.+|+. |+.. ..+++ .++ .. ...-...
T Consensus 88 ~~~~~gv~e~L~~L~~~g---~~l~i~T~k-~~~~~~~~l~~~gl~~~F~~i~g----~~~----~~------~~KP~P~ 149 (220)
T COG0546 88 SRLFPGVKELLAALKSAG---YKLGIVTNK-PERELDILLKALGLADYFDVIVG----GDD----VP------PPKPDPE 149 (220)
T ss_pred CccCCCHHHHHHHHHhCC---CeEEEEeCC-cHHHHHHHHHHhCCccccceEEc----CCC----CC------CCCcCHH
Confidence 579999999999999999 999999988 68888888886 6532 12222 010 00 0111345
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
.+..++...+.+ +.++++||||.+|+.|.+.|++
T Consensus 150 ~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~ 183 (220)
T COG0546 150 PLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV 183 (220)
T ss_pred HHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC
Confidence 666777777765 4689999999999999999996
No 61
>PLN02940 riboflavin kinase
Probab=98.50 E-value=2.7e-06 Score=90.78 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=70.4
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHh-C-CCC--cceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS-S-GLN--ALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~-~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
+++.+.||+.++++.|+++| +++.|+|.+ +...+...|. . ++. ...|+|.+- +..+--
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g---~~l~IvTn~-~~~~~~~~l~~~~gl~~~Fd~ii~~d~--------------v~~~KP 151 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHG---VPMALASNS-PRANIEAKISCHQGWKESFSVIVGGDE--------------VEKGKP 151 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCC---CcEEEEeCC-cHHHHHHHHHhccChHhhCCEEEehhh--------------cCCCCC
Confidence 46788999999999999998 999999998 5777777775 3 442 122322220 111122
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
+.+.+...++..+.. +.++++||||.+|+.+...||+.++
T Consensus 152 ~p~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 152 SPDIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred CHHHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 456777777777653 5789999999999999999998533
No 62
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.45 E-value=1.6e-05 Score=81.50 Aligned_cols=102 Identities=20% Similarity=0.241 Sum_probs=68.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
+.+.||+.++++.++++| +++.|+|.+ +...+...+.... ... +.+.+.+ .+|. .+...--+...+.
T Consensus 143 ~~l~pGv~elL~~L~~~g---~~l~IvTn~-~~~~~~~~l~~~~-~~~-~~~~~~~----v~~~---~~~~~KP~p~~~~ 209 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAG---IKVAVCSTS-NEKAVSKIVNTLL-GPE-RAQGLDV----FAGD---DVPKKKPDPDIYN 209 (286)
T ss_pred CCchhhHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhc-ccc-ccCceEE----Eecc---ccCCCCCCHHHHH
Confidence 689999999999999998 999999987 6777877776410 000 0111111 0111 0111122345777
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+...+.+ +.++++||||.+|+.+...+|+.++.
T Consensus 210 ~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~ 244 (286)
T PLN02779 210 LAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIV 244 (286)
T ss_pred HHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEE
Confidence 777777653 57899999999999999999985444
No 63
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.40 E-value=6.8e-06 Score=89.95 Aligned_cols=92 Identities=18% Similarity=0.290 Sum_probs=67.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++| +++.|+|.+ +.+.+...++. ++.. ..|++-+ + . .+..|.
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g---~~l~IvS~~-~~~~~~~~l~~~~l~~~f~~i~~~d----~------v-----~~~~kP 388 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENN---CSIYIASNG-LTEYLRAIVSYYDLDQWVTETFSIE----Q------I-----NSLNKS 388 (459)
T ss_pred CCCcCCCHHHHHHHHHHCC---CeEEEEeCC-chHHHHHHHHHCCcHhhcceeEecC----C------C-----CCCCCc
Confidence 4688999999999999988 999999998 68888988876 5421 1222211 0 0 011344
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+...+++.+ ...+++||||.+|+.+...|++.
T Consensus 389 ~~~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~ 422 (459)
T PRK06698 389 DLVKSILNKYD---IKEAAVVGDRLSDINAAKDNGLI 422 (459)
T ss_pred HHHHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCe
Confidence 56666665543 36799999999999999999984
No 64
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.36 E-value=1.3e-05 Score=78.76 Aligned_cols=98 Identities=12% Similarity=0.177 Sum_probs=67.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.+.+.||+.++++.+ + +++.|+|.+ ....++..|+. ++... |++.+.++. .+...--+...
T Consensus 86 ~~~~~~gv~~~L~~L---~---~~~~ivTn~-~~~~~~~~l~~~~l~~~--------F~~~v~~~~---~~~~~KP~p~~ 147 (221)
T PRK10563 86 ELEPIAGANALLESI---T---VPMCVVSNG-PVSKMQHSLGKTGMLHY--------FPDKLFSGY---DIQRWKPDPAL 147 (221)
T ss_pred cCCcCCCHHHHHHHc---C---CCEEEEeCC-cHHHHHHHHHhcChHHh--------CcceEeeHH---hcCCCCCChHH
Confidence 578899999999988 3 799999998 57788888876 54211 111111111 00111224567
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
+...++..+.. +..+++|||+.+|+.+.+.||+.++.
T Consensus 148 ~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 77777777663 57899999999999999999996543
No 65
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.32 E-value=1.8e-06 Score=97.58 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=80.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-++|||..+.++.|++.| +.++++|+. .......+-++ |++ +++++ +++.+|.+.+
T Consensus 445 D~~Rp~a~eaI~~l~~~G---i~v~miTGD-~~~ta~~iA~~lGI~--~v~a~-----------------~~PedK~~~v 501 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMG---IKTIMITGD-NRLTAAAIAAEAGVD--DFIAE-----------------ATPEDKIALI 501 (675)
T ss_pred ccchhHHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCC--EEEcC-----------------CCHHHHHHHH
Confidence 389999999999999999 999999986 35444444333 542 33331 3567899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhH
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 526 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~ 526 (563)
+++.++ +..+.++|||.||.++|..||+||++++...+.+-+. .++=+++++.
T Consensus 502 ~~lq~~-----g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaa----divLldd~~s 554 (675)
T TIGR01497 502 RQEQAE-----GKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAA----NMVDLDSDPT 554 (675)
T ss_pred HHHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhC----CEEECCCCHH
Confidence 998763 3568899999999999999999999986554442221 5665655444
No 66
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=98.32 E-value=2.8e-05 Score=76.11 Aligned_cols=97 Identities=18% Similarity=0.206 Sum_probs=67.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
...+.||+.++++.++++ ++++|+|.++ ...++..++. ++.. ..|++..- .| ...-+.
T Consensus 95 ~~~~~~g~~~~L~~l~~~----~~~~i~Sn~~-~~~~~~~l~~~~l~~~fd~i~~~~~-------~~-------~~KP~~ 155 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK----FRLYIVTNGV-RETQYKRLRKSGLFPFFDDIFVSED-------AG-------IQKPDK 155 (224)
T ss_pred cCeeCccHHHHHHHHHhc----CcEEEEeCCc-hHHHHHHHHHCCcHhhcCEEEEcCc-------cC-------CCCCCH
Confidence 468999999999999874 6999999985 6777777776 5532 22222110 01 111244
Q ss_pred HHHHHHHHHh-CCCCCccEEEEcCCc-CchHHhhhcCc-cEEE
Q 008499 462 QAFNNTLEKY-GTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~-~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi 501 (563)
..+...++.. +. .+.++++||||. +|+.+.+.+|+ +|.+
T Consensus 156 ~~~~~~~~~~~~~-~~~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 156 EIFNYALERMPKF-SKEEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred HHHHHHHHHhcCC-CchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 5666666666 54 357899999998 79999999998 4444
No 67
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.31 E-value=9.9e-06 Score=78.08 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=59.3
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHH-HHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA-SFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~-~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
+...+.||+.++++.|++++ +++++|.+ +. .... .++. ++.. .+-. .| +.+.++.. ...|.
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~----~~~i~Tn~-~~-~~~~~~~~~~~l~~--~f~~--~f-~~i~~~~~------~~~kp 133 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDY----DFVAVTAL-GD-SIDALLNRQFNLNA--LFPG--AF-SEVLMCGH------DESKE 133 (197)
T ss_pred HhccCCCCHHHHHHHHHhcC----CEEEEeCC-cc-chhHHHHhhCCHHH--hCCC--cc-cEEEEecc------CcccH
Confidence 35679999999999998754 57777764 22 2333 2222 3210 0000 01 01111110 11356
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc--CccEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA--DIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A--d~givi 501 (563)
..+...+.+.+ ...++|||||.+|+.+...| |+.++.
T Consensus 134 ~~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 134 KLFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred HHHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 77777777665 35689999999999999999 985444
No 68
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.27 E-value=2.3e-05 Score=75.61 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=60.0
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc--eEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL--NVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~--~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
..++..++++.++++| +++.|+|++ ....++..|+. |+... .+++-+ + ... --+...+
T Consensus 107 ~~~~~~~~L~~l~~~g---~~~~i~T~~-~~~~~~~~l~~~gl~~~f~~~~~~~----~----------~~~-KP~p~~~ 167 (197)
T TIGR01548 107 TLLTPKGLLRELHRAP---KGMAVVTGR-PRKDAAKFLTTHGLEILFPVQIWME----D----------CPP-KPNPEPL 167 (197)
T ss_pred cccCHHHHHHHHHHcC---CcEEEECCC-CHHHHHHHHHHcCchhhCCEEEeec----C----------CCC-CcCHHHH
Confidence 4456699999999888 999999998 57888888876 65321 111111 1 001 1244556
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
...++..+.. ..++++|||+.+|+.+...|
T Consensus 168 ~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 168 ILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 6666666653 46899999999999988754
No 69
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.25 E-value=6.1e-05 Score=71.75 Aligned_cols=97 Identities=11% Similarity=0.196 Sum_probs=65.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||..++++.++ .+++|+|.+ +...+...|+. |+.. ..|++.+- .|. .....--+.
T Consensus 82 ~~~~~~g~~~~L~~L~------~~~~i~Tn~-~~~~~~~~l~~~gl~~~fd~i~~~~~-------~~~---~~~~~KP~p 144 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP------GRKIIFTNG-DRAHARRALNRLGIEDCFDGIFCFDT-------ANP---DYLLPKPSP 144 (184)
T ss_pred hCCCCHHHHHHHHhCC------CCEEEEeCC-CHHHHHHHHHHcCcHhhhCeEEEeec-------ccC---ccCCCCCCH
Confidence 4568899999999886 368999998 47788888876 5532 22333221 010 000011244
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
..+...+++.+.. +.++++|||+..|+.+...+|+..
T Consensus 145 ~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 6677777776653 578999999999999999999743
No 70
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=98.24 E-value=3.6e-05 Score=72.64 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=63.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc--
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK-- 460 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K-- 460 (563)
+.+.||+.++++.++++| +++.|+|.+. ... ...+.+ ++.. ..|++.+ . .+..|
T Consensus 84 ~~~~~g~~~~l~~l~~~g---~~~~i~Tn~~-~~~-~~~~~~~~l~~~f~~i~~~~--------------~--~~~~KP~ 142 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARG---KKLALLTNSP-RDH-AVLVQELGLRDLFDVVIFSG--------------D--VGRGKPD 142 (183)
T ss_pred CccCcCHHHHHHHHHHCC---CeEEEEeCCc-hHH-HHHHHhcCCHHHCCEEEEcC--------------C--CCCCCCC
Confidence 689999999999999988 9999999985 444 444442 4321 1222211 0 11223
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
...++..++..+.. +.++++|||+..|+.+.+.+|+-
T Consensus 143 ~~~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 143 PDIYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 45667777766653 57899999999999999999973
No 71
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=98.24 E-value=1e-05 Score=87.29 Aligned_cols=119 Identities=11% Similarity=0.047 Sum_probs=85.8
Q ss_pred hhccCCCCHHHHHHHhccC-------CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccE
Q 008499 368 SGVLKGINLEDIKKAGERL-------SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFS 440 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~i-------~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~ 440 (563)
.-.|+|++.+++++.++.+ .+++. .++..+..| .++|||++- ..+++..++.-++.+.|++++++
T Consensus 70 ~v~f~Gl~~~die~vaRavlpkf~~~dv~~e---~~~~~~~~g----~~vVVTAsP-rvmVEpFake~LG~D~VvGTEL~ 141 (498)
T PLN02499 70 FVATAGVHESEIESVARAVLPKFYMDDVDME---AWKVFSSCD----KRVVVTRMP-RVMVERFAKEHLRADEVIGSELV 141 (498)
T ss_pred HHHhCCCCHHHHHHHHHHHhhHHHHhhCCHH---HHHHHHcCC----eEEEEeCCH-HHHHHHHHHHhcCCceEEeeeEE
Confidence 4678999999998877632 33444 455555544 889999973 66777777654555778999999
Q ss_pred ecC-ccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 441 FKE-SISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 441 ~~~-g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
+.+ |.+||.+.+.+| +..|.+++++.... ....+-+||+.+|-..+..+- ++.+
T Consensus 142 v~~~G~~TG~~~G~n~-~ek~~~rl~~~~g~-----~~~~vg~~~~~~~~~f~~~ck-~~~~ 196 (498)
T PLN02499 142 VNRFGFATGFIRGTDV-DQSVANRVANLFVD-----ERPQLGLGRISASSSFLSLCK-EQIH 196 (498)
T ss_pred EeeccEEEEEEecCcc-HHHHHHHHHHHhCc-----cCceecccCCcccchhhhhCc-eEEe
Confidence 985 999999987665 43447777776531 235788999999999888876 5555
No 72
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.23 E-value=3.9e-06 Score=94.08 Aligned_cols=94 Identities=24% Similarity=0.340 Sum_probs=74.4
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
...+|||+.++++.++++| ++++|+|+. .....+.+++. |++ ++++- .+.+|.+.
T Consensus 403 ~d~l~~~a~e~i~~Lk~~G---i~v~ilSgd-~~~~a~~ia~~lgi~---~~~~~-----------------~p~~K~~~ 458 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRG---IEPVMLTGD-NRKTAKAVAKELGIN---VRAEV-----------------LPDDKAAL 458 (562)
T ss_pred cccccHHHHHHHHHHHHcC---CeEEEEcCC-CHHHHHHHHHHcCCc---EEccC-----------------ChHHHHHH
Confidence 3579999999999999999 999999998 57777777665 552 33221 23478888
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhH
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 507 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L 507 (563)
++++..+ +.+++|||||.||.+++..||+||.++....+
T Consensus 459 v~~l~~~-----~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~ 497 (562)
T TIGR01511 459 IKELQEK-----GRVVAMVGDGINDAPALAQADVGIAIGAGTDV 497 (562)
T ss_pred HHHHHHc-----CCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH
Confidence 8888752 46899999999999999999999999855433
No 73
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=98.20 E-value=4.7e-06 Score=94.40 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=77.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
++|||..+.++.|++.| +.++++|+- +..-...+-++ |++ +++| .+++.+|.+.++
T Consensus 445 ~~R~~~~eai~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGId--~v~A-----------------~~~PedK~~iV~ 501 (679)
T PRK01122 445 IVKPGIKERFAELRKMG---IKTVMITGD-NPLTAAAIAAEAGVD--DFLA-----------------EATPEDKLALIR 501 (679)
T ss_pred cCchhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCc--EEEc-----------------cCCHHHHHHHHH
Confidence 78999999999999999 999999985 34333333332 542 2222 135678999999
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhH
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 526 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~ 526 (563)
++.++ +..|.++|||.||-++|..|||||+++..+.++ ++- -+++=+++++.
T Consensus 502 ~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA---keA-ADiVLldd~~s 553 (679)
T PRK01122 502 QEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA---KEA-GNMVDLDSNPT 553 (679)
T ss_pred HHHHc-----CCeEEEECCCcchHHHHHhCCEeEEeCCCCHHH---HHh-CCEEEeCCCHH
Confidence 98863 356789999999999999999999999654333 222 24555554443
No 74
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=98.19 E-value=4e-05 Score=74.60 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=66.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChH--hhHHHHhCCCC--cceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD--LIRASFSSGLN--ALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~--~I~~~L~~~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
.+.+.||+.++++.|+++| +++.|+|.++... .+......++. ...|++.. ..+..|
T Consensus 92 ~~~~~~~~~~~L~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~----------------~~~~~K 152 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKG---FKTACITNNFPTDHSAEEALLPGDIMALFDAVVESC----------------LEGLRK 152 (211)
T ss_pred ccccChhHHHHHHHHHHCC---CeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEee----------------ecCCCC
Confidence 5789999999999999988 9999999874221 11111111221 11222111 011123
Q ss_pred --HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCChhHH
Q 008499 461 --VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLR 508 (563)
Q Consensus 461 --~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~~L~ 508 (563)
...+...+++.+. .+..+++|||+..|+.+...+|+ .|.+.+...+.
T Consensus 153 P~p~~~~~~~~~~g~-~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~ 202 (211)
T TIGR02247 153 PDPRIYQLMLERLGV-APEECVFLDDLGSNLKPAAALGITTIKVSDEEQAI 202 (211)
T ss_pred CCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 3466666666665 35789999999999999999999 55555444444
No 75
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.19 E-value=3.5e-05 Score=73.42 Aligned_cols=93 Identities=13% Similarity=0.038 Sum_probs=64.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.|| .+++..+++ + +++.|+|++. ...++..|++ ++.. ..|++.+ .....--+.
T Consensus 86 ~~~~~~~-~e~L~~L~~-~---~~l~I~T~~~-~~~~~~~l~~~~l~~~fd~i~~~~--------------~~~~~KP~p 145 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHG-R---RPMAVGTGSE-SAIAEALLAHLGLRRYFDAVVAAD--------------DVQHHKPAP 145 (188)
T ss_pred cCCCccH-HHHHHHHHh-C---CCEEEEcCCc-hHHHHHHHHhCCcHhHceEEEehh--------------hccCCCCCh
Confidence 4566676 588988875 3 6899999984 7788888876 5532 1222211 001122355
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
..+.....+.+.. +.+++||||+..|+.+...||+.
T Consensus 146 ~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 146 DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 6777777777653 57899999999999999999984
No 76
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.16 E-value=2.1e-05 Score=78.29 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=55.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcccc---ChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW---CGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gw---s~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.+++.+|+++++++| ++++|||+.. ....++.+++. |++.. + ...+ +|.-..+ .-.+|.
T Consensus 113 s~p~~~a~elL~~l~~~G---~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f--~~i~-----~~d~~~~--~Kp~~~ 178 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRG---DAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--N--PVIF-----AGDKPGQ--YQYTKT 178 (237)
T ss_pred CcchhHHHHHHHHHHHCC---CEEEEEeCCCCCcCHHHHHHHHHHhCCchh--e--eEEE-----CCCCCCC--CCCCHH
Confidence 355566999999999999 9999999852 13466666655 66431 1 1112 2211111 011343
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
. .+.++ ..++||||+.+|+.+.+.|++
T Consensus 179 ~----~l~~~-----~i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 179 Q----WIQDK-----NIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred H----HHHhC-----CCeEEEeCCHHHHHHHHHCCC
Confidence 2 23322 247999999999999999998
No 77
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=98.14 E-value=5.6e-06 Score=93.71 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=77.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-++|||..+.++.|++.| +.++++|+- +..-...+-++ |+. ++++ -+++.+|.+.+
T Consensus 440 Dp~R~~a~e~I~~Lr~~G---I~vvMiTGD-n~~TA~aIA~elGI~--~v~A-----------------~~~PedK~~iV 496 (673)
T PRK14010 440 DVIKDGLVERFRELREMG---IETVMCTGD-NELTAATIAKEAGVD--RFVA-----------------ECKPEDKINVI 496 (673)
T ss_pred cCCcHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCc--eEEc-----------------CCCHHHHHHHH
Confidence 389999999999999999 999999985 33333333222 442 2222 13567999999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhH
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 526 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~ 526 (563)
+++.++ +..|.++|||.||-++|..||+||+++....++ ++- -.++=+++++.
T Consensus 497 ~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvA---keA-ADiVLldd~ls 549 (673)
T PRK14010 497 REEQAK-----GHIVAMTGDGTNDAPALAEANVGLAMNSGTMSA---KEA-ANLIDLDSNPT 549 (673)
T ss_pred HHHHhC-----CCEEEEECCChhhHHHHHhCCEEEEeCCCCHHH---HHh-CCEEEcCCCHH
Confidence 998763 356779999999999999999999999554433 222 25666655443
No 78
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.09 E-value=8.3e-06 Score=92.59 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=72.4
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-.+||+..+.++.|++.| +.++++|+- +..-.+.+-++ |+ .+++++ ..+.+|.+.+
T Consensus 536 D~~R~~a~~aI~~L~~~G---i~~~mLTGD-n~~~A~~iA~~lGI--d~v~Ae-----------------llPedK~~~V 592 (713)
T COG2217 536 DELRPDAKEAIAALKALG---IKVVMLTGD-NRRTAEAIAKELGI--DEVRAE-----------------LLPEDKAEIV 592 (713)
T ss_pred CCCChhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCh--Hhhecc-----------------CCcHHHHHHH
Confidence 489999999999999999 999999985 45444444333 43 333333 2456899999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
+++.++ +..+.+||||.||-|+|..||+||+|+..+
T Consensus 593 ~~l~~~-----g~~VamVGDGINDAPALA~AdVGiAmG~Gt 628 (713)
T COG2217 593 RELQAE-----GRKVAMVGDGINDAPALAAADVGIAMGSGT 628 (713)
T ss_pred HHHHhc-----CCEEEEEeCCchhHHHHhhcCeeEeecCCc
Confidence 999853 467899999999999999999999999653
No 79
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.08 E-value=0.00012 Score=87.64 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=69.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC---cceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN---ALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~---~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
.+.||+.++++.|+++| +++.|+|.+ ....++..|+. ++. ...|++.+- ...+--+..
T Consensus 161 ~~~pG~~elL~~Lk~~G---~~l~IvSn~-~~~~~~~~L~~~gl~~~~Fd~iv~~~~--------------~~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKG---LKVAVASSA-DRIKVDANLAAAGLPLSMFDAIVSADA--------------FENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCC---CeEEEEeCC-cHHHHHHHHHHcCCChhHCCEEEECcc--------------cccCCCCHH
Confidence 47899999999999999 999999988 47778888876 653 122222210 001112346
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
.+...+++.+.. +.++++|||+.+|+.+.+.|++- |.+.
T Consensus 223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 667777777653 57899999999999999999983 4443
No 80
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.07 E-value=5e-06 Score=80.49 Aligned_cols=88 Identities=20% Similarity=0.207 Sum_probs=62.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc--H
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK--V 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K--~ 461 (563)
..++|||..++++.|++.| +++.|+|+. +......+... |+....|+++.. ..+..| .
T Consensus 125 ~d~~~~~~~~~l~~L~~~G---i~~~i~TGD-~~~~a~~~~~~lgi~~~~v~a~~~---------------~kP~~k~~~ 185 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAG---IKVAILTGD-NESTASAIAKQLGIFDSIVFARVI---------------GKPEPKIFL 185 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTT---EEEEEEESS-EHHHHHHHHHHTTSCSEEEEESHE---------------TTTHHHHHH
T ss_pred cCcchhhhhhhhhhhhccC---cceeeeecc-cccccccccccccccccccccccc---------------ccccchhHH
Confidence 4589999999999999999 999999986 45555555554 664333444432 233456 4
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
++++++ +. .+..+++||||.||.+|++.||
T Consensus 186 ~~i~~l----~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 186 RIIKEL----QV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHH----TC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHHHHH----hc-CCCEEEEEccCHHHHHHHHhCc
Confidence 444443 32 2358999999999999999987
No 81
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=98.03 E-value=1.5e-05 Score=93.60 Aligned_cols=111 Identities=17% Similarity=0.225 Sum_probs=73.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEee-ccEe-cCccccC-----cccccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHAN-EFSF-KESISTG-----EIIEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN-~l~~-~~g~~tG-----~~~~~~~~g 457 (563)
-++||+..+.++.|++.| +.+.+||+- +..-...+-++ |+...++++. ++.- ++..+.. .+-. -+++
T Consensus 514 Dp~R~~~~~aI~~l~~aG---I~vvmiTGD-~~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA-r~~P 588 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNG---INVKVLTGD-NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFA-RLTP 588 (867)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE-ECCH
Confidence 489999999999999999 999999985 33333333233 6642223221 1110 0000000 0111 2567
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
.+|.++++.+.+. +..|.++|||.||.++|+.||+||+++..+.
T Consensus 589 e~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~AdVGIAmg~gtd 632 (867)
T TIGR01524 589 MQKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKADVGISVDTAAD 632 (867)
T ss_pred HHHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCCEEEEeCCccH
Confidence 8999999998763 3567799999999999999999999985443
No 82
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=98.03 E-value=0.00024 Score=70.75 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=60.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
.+.+.||+.++++.|++ + +++.|+|.| +... .. |+.. ..|++.+ .+ ...--+.
T Consensus 111 ~~~~~~gv~~~L~~L~~-~---~~l~i~Tn~-~~~~-----~~~gl~~~fd~i~~~~----------~~----~~~KP~p 166 (238)
T PRK10748 111 RIDVPQATHDTLKQLAK-K---WPLVAITNG-NAQP-----ELFGLGDYFEFVLRAG----------PH----GRSKPFS 166 (238)
T ss_pred cCCCCccHHHHHHHHHc-C---CCEEEEECC-CchH-----HHCCcHHhhceeEecc----------cC----CcCCCcH
Confidence 57888999999999985 4 789999987 3331 22 4321 1222211 00 0111245
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCcc-EEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG-IVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g-ivi 501 (563)
..+...++..+. .+..+++|||+ ..|+.+...+|+- |.+
T Consensus 167 ~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 167 DMYHLAAEKLNV-PIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHcCC-ChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 667776766665 35789999999 5999999999984 434
No 83
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.97 E-value=7.1e-05 Score=72.00 Aligned_cols=126 Identities=21% Similarity=0.300 Sum_probs=89.9
Q ss_pred CCCCHHHHHHHhcc-CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecC-----c
Q 008499 372 KGINLEDIKKAGER-LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKE-----S 444 (563)
Q Consensus 372 ~Gi~~~~i~~~~~~-i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~-----g 444 (563)
.|++.++++++.+. ..|-||+.+.++.+++. ++-+|+|.++ ..+++..-+. |++--+++|.++.+|+ +
T Consensus 67 hGVt~~dlrr~sE~sa~lvPgA~etm~~l~~~----~tp~v~STSY-~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~Pee 141 (315)
T COG4030 67 HGVTNRDLRRISELSAKLVPGAEETMATLQER----WTPVVISTSY-TQYLRRTASMIGVPRGELHGTEVDLDSIAVPEE 141 (315)
T ss_pred hcCcHHHHHHHHHhhcccCCChHHHHHHHhcc----CCceEEeccH-HHHHHHHHHhcCCCccccccccccCccccCChH
Confidence 68999999999885 89999999999999875 5778999986 5566665444 6766678888888772 1
Q ss_pred -c------------ccCc--------------------cc--ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCch
Q 008499 445 -I------------STGE--------------------II--EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDL 489 (563)
Q Consensus 445 -~------------~tG~--------------------~~--~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl 489 (563)
. ..|+ +. -+...|..|.++++.++.-.+. +..+++||||++|.
T Consensus 142 eR~E~L~~~~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~--d~sa~~VGDSItDv 219 (315)
T COG4030 142 EREELLSIIDVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGI--DFSAVVVGDSITDV 219 (315)
T ss_pred HHHHHHHhcCccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCC--CcceeEecCcccch
Confidence 0 1121 11 0244566778888887765443 23478999999999
Q ss_pred HHhhhcC----ccEEEcCC
Q 008499 490 LCLLEAD----IGIVIGSS 504 (563)
Q Consensus 490 ~~l~~Ad----~givi~~~ 504 (563)
.||+.+. +.|.|+.+
T Consensus 220 ~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 220 KMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHhhccCceEEEecCC
Confidence 9999973 34555544
No 84
>PLN02811 hydrolase
Probab=97.97 E-value=9.6e-05 Score=72.67 Aligned_cols=100 Identities=9% Similarity=0.112 Sum_probs=62.1
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHH-HHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRA-SFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~-~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
....+.||+.++++.|+++| +++.|+|++. ...+.. .+.. ++.. ..++|.+ + ..+..+--
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g---~~~~i~S~~~-~~~~~~~~~~~~~l~~~f~~i~~~~----~--------~~~~~~KP 138 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKG---IPIAIATGSH-KRHFDLKTQRHGELFSLMHHVVTGD----D--------PEVKQGKP 138 (220)
T ss_pred hhCCCCccHHHHHHHHHHCC---CcEEEEeCCc-hhhHHHHHcccHHHHhhCCEEEECC----h--------hhccCCCC
Confidence 35788999999999999988 9999999874 333332 2221 2211 1222211 0 00001111
Q ss_pred cHHHHHHHHHHhC---CCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 460 KVQAFNNTLEKYG---TDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 460 K~~~l~~~~~~~~---~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
+...+...+++.+ . .+..++||||+..|+.+.+.||+.++
T Consensus 139 ~p~~~~~a~~~~~~~~~-~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 139 APDIFLAAARRFEDGPV-DPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CcHHHHHHHHHhCCCCC-CccceEEEeccHhhHHHHHHCCCeEE
Confidence 2345555555553 3 35789999999999999999999433
No 85
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.97 E-value=1.8e-05 Score=88.22 Aligned_cols=90 Identities=22% Similarity=0.280 Sum_probs=72.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCC-cEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNA-NVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~-~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
.-.+|||..+.++.|+++| + ++.|+|+. .....+.++++ |++ +++++ ..+.+|..
T Consensus 360 ~d~l~~~~~e~i~~L~~~G---i~~v~vvTgd-~~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~ 416 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALG---IEKVVMLTGD-RRAVAERVARELGID--EVHAE-----------------LLPEDKLE 416 (536)
T ss_pred eccchHHHHHHHHHHHHcC---CCcEEEEcCC-CHHHHHHHHHHcCCh--hhhhc-----------------cCcHHHHH
Confidence 4589999999999999999 9 99999998 46777777765 552 12211 12457888
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.++++..+ +.+++|||||.||.++++.||+||.++
T Consensus 417 ~i~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g 451 (536)
T TIGR01512 417 IVKELREK-----YGPVAMVGDGINDAPALAAADVGIAMG 451 (536)
T ss_pred HHHHHHhc-----CCEEEEEeCCHHHHHHHHhCCEEEEeC
Confidence 88888753 367999999999999999999999998
No 86
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.96 E-value=1.9e-05 Score=91.46 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=73.8
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEE-eeccEecC--cccc-Cc---------cc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVH-ANEFSFKE--SIST-GE---------II 451 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~-aN~l~~~~--g~~t-G~---------~~ 451 (563)
-++||+..+.++.|++.| +.++++|+- +......+-++ |+... ++ ++++.-.+ ...+ ++ +-
T Consensus 441 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 441 DPPRHDTKETIERARHLG---VEVKMVTGD-HLAIAKETARRLGLGTN-IYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred CCChhhHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCC-CcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 389999999999999999 999999986 44444444444 66421 22 12211000 0000 00 11
Q ss_pred ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 452 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 452 ~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
. -+++.+|.++++.+.+. +..|.++|||.||.++|+.||+||+++..+
T Consensus 516 A-r~~Pe~K~~iV~~lq~~-----G~~VamvGDGvNDapAL~~AdVGIAm~~gt 563 (755)
T TIGR01647 516 A-EVFPEHKYEIVEILQKR-----GHLVGMTGDGVNDAPALKKADVGIAVAGAT 563 (755)
T ss_pred E-ecCHHHHHHHHHHHHhc-----CCEEEEEcCCcccHHHHHhCCeeEEecCCc
Confidence 1 24667999999998763 456889999999999999999999998544
No 87
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.94 E-value=2.4e-05 Score=90.41 Aligned_cols=92 Identities=21% Similarity=0.237 Sum_probs=71.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.-++|||..+.++.|++.| ++++++|+- +....+.+.+. |+. ++++ ..+.+|...
T Consensus 566 ~d~~r~~a~~~i~~L~~~g---i~~~llTGd-~~~~a~~ia~~lgi~---~~~~-----------------~~p~~K~~~ 621 (741)
T PRK11033 566 QDTLRADARQAISELKALG---IKGVMLTGD-NPRAAAAIAGELGID---FRAG-----------------LLPEDKVKA 621 (741)
T ss_pred ecCCchhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCC---eecC-----------------CCHHHHHHH
Confidence 3589999999999999999 999999986 45566665554 552 2211 234589999
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChh
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSS 506 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~ 506 (563)
++++.+ ..++.+||||.||.++|..||+||.++..+.
T Consensus 622 v~~l~~------~~~v~mvGDgiNDapAl~~A~vgia~g~~~~ 658 (741)
T PRK11033 622 VTELNQ------HAPLAMVGDGINDAPAMKAASIGIAMGSGTD 658 (741)
T ss_pred HHHHhc------CCCEEEEECCHHhHHHHHhCCeeEEecCCCH
Confidence 998764 2479999999999999999999999985543
No 88
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.93 E-value=4.1e-05 Score=71.16 Aligned_cols=84 Identities=19% Similarity=0.330 Sum_probs=65.3
Q ss_pred HHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCC
Q 008499 395 FFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGT 473 (563)
Q Consensus 395 fl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~ 473 (563)
.++.|+++| +.+.|+|++. ...+...++. |+. .++. | ...|...+.+++...+.
T Consensus 36 ~i~~Lk~~G---~~i~IvTn~~-~~~~~~~l~~~gi~--~~~~-----------~--------~~~k~~~~~~~~~~~~~ 90 (154)
T TIGR01670 36 GIRCALKSG---IEVAIITGRK-AKLVEDRCKTLGIT--HLYQ-----------G--------QSNKLIAFSDILEKLAL 90 (154)
T ss_pred HHHHHHHCC---CEEEEEECCC-CHHHHHHHHHcCCC--EEEe-----------c--------ccchHHHHHHHHHHcCC
Confidence 688889888 9999999984 6677777765 553 2221 1 12488889999887775
Q ss_pred CCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 474 DRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 474 ~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
. ...++|||||.+|+.|+..|++++++++.
T Consensus 91 ~-~~~~~~vGDs~~D~~~~~~ag~~~~v~~~ 120 (154)
T TIGR01670 91 A-PENVAYIGDDLIDWPVMEKVGLSVAVADA 120 (154)
T ss_pred C-HHHEEEECCCHHHHHHHHHCCCeEecCCc
Confidence 3 47899999999999999999999988744
No 89
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.93 E-value=2.3e-05 Score=92.31 Aligned_cols=110 Identities=15% Similarity=0.206 Sum_probs=73.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEe-eccEe-cCcccc-----CcccccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHA-NEFSF-KESIST-----GEIIEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~a-N~l~~-~~g~~t-----G~~~~~~~~g 457 (563)
-++||+..+.++.|++.| +.++++|+- +..-...+-++ |+....+++ .++.- ++..+. -.+-. -+++
T Consensus 549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~sP 623 (902)
T PRK10517 549 DPPKETTAPALKALKASG---VTVKILTGD-SELVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RLTP 623 (902)
T ss_pred CcchhhHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-EcCH
Confidence 489999999999999999 999999985 33333333333 664323322 22211 000000 00111 2467
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
.+|.++++.+.+. +..|.++|||.||.++|+.|||||.++...
T Consensus 624 e~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 624 MHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred HHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 8999999998863 356779999999999999999999998543
No 90
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.91 E-value=2.8e-05 Score=91.65 Aligned_cols=112 Identities=16% Similarity=0.232 Sum_probs=73.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEE-eeccEe-cCccccC-----cccccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVH-ANEFSF-KESISTG-----EIIEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~-aN~l~~-~~g~~tG-----~~~~~~~~g 457 (563)
-++||+..+.++.|++.| +.+++||+- +..-...+-++ |+....++ ..++.. ++..+.. .+-. -+++
T Consensus 549 Dp~R~~a~~aI~~l~~aG---I~v~miTGD-~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfA-r~sP 623 (903)
T PRK15122 549 DPPKESAAPAIAALRENG---VAVKVLTGD-NPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFA-KLTP 623 (903)
T ss_pred CccHHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEE-EeCH
Confidence 489999999999999999 999999985 33333333333 66322222 112111 0000000 0111 2466
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhH
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSL 507 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L 507 (563)
.+|.++++.+.+. +..|.++|||.||.++|+.|||||+++..+.+
T Consensus 624 e~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv 668 (903)
T PRK15122 624 LQKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISVDSGADI 668 (903)
T ss_pred HHHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEeCcccHH
Confidence 7999999998863 35677999999999999999999999854433
No 91
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.91 E-value=3.3e-05 Score=72.95 Aligned_cols=90 Identities=13% Similarity=0.267 Sum_probs=66.7
Q ss_pred HHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCC
Q 008499 396 FQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474 (563)
Q Consensus 396 l~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~ 474 (563)
++.|+++| +++.|+|.+ +...++..+.. ++. +++. + ...|...++.+++..+..
T Consensus 43 ~~~L~~~G---i~laIiT~k-~~~~~~~~l~~lgi~--~~f~-------~------------~kpkp~~~~~~~~~l~~~ 97 (169)
T TIGR02726 43 VIVLQLCG---IDVAIITSK-KSGAVRHRAEELKIK--RFHE-------G------------IKKKTEPYAQMLEEMNIS 97 (169)
T ss_pred HHHHHHCC---CEEEEEECC-CcHHHHHHHHHCCCc--EEEe-------c------------CCCCHHHHHHHHHHcCcC
Confidence 34456667 999999998 57788888876 553 1111 0 025778888888887653
Q ss_pred CCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHH
Q 008499 475 RKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 511 (563)
Q Consensus 475 ~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~ 511 (563)
..+++||||+.||+.|++.|++++++++ .+.++..+
T Consensus 98 -~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A 134 (169)
T TIGR02726 98 -DAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAA 134 (169)
T ss_pred -HHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhC
Confidence 4789999999999999999999999974 45565554
No 92
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.88 E-value=8.8e-05 Score=73.80 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=57.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccc---cChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYC---WCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~g---ws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.||+.++++.++++| +++++||+- -....++..++. |++..+.+ .+. ++|.- ..-.+|.
T Consensus 113 a~p~~Ga~elL~~L~~~G---~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f--~vi-----l~gd~----~~K~~K~ 178 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRG---DSIYFITGRTATKTETVSKTLADDFHIPADNMN--PVI-----FAGDK----PGQYTKT 178 (237)
T ss_pred CcchHHHHHHHHHHHHCC---CeEEEEeCCCCcccHHHHHHHHHHcCCCcccce--eEE-----EcCCC----CCCCCHH
Confidence 568888999999999999 999999972 123455555543 66323211 111 22221 1123455
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
..++ ++ ..+|||||+.+|+.+...||+
T Consensus 179 ~~l~----~~-----~i~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 179 QWLK----KK-----NIRIFYGDSDNDITAAREAGA 205 (237)
T ss_pred HHHH----hc-----CCeEEEcCCHHHHHHHHHcCC
Confidence 4433 22 248999999999999999998
No 93
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.82 E-value=6.3e-05 Score=89.34 Aligned_cols=107 Identities=20% Similarity=0.170 Sum_probs=71.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEE-eeccEec-Ccccc-----CcccccCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVH-ANEFSFK-ESIST-----GEIIEKVE 455 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~-aN~l~~~-~g~~t-----G~~~~~~~ 455 (563)
-++||+..+.++.|++.| +.+.++|+- ...-...+-++ |+.. ..++ .+++.-- +.... -.+-. -+
T Consensus 578 Dplr~~~~~aI~~l~~aG---I~v~miTGD-~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfa-r~ 652 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAG---ITVRMVTGD-NIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLA-RS 652 (941)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEECCC-ChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEE-EC
Confidence 389999999999999999 999999985 33333333223 5521 1111 2222100 00000 01111 25
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++.+|.++++.+.+. +..|.++|||.||.++|+.|||||+++
T Consensus 653 sPe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAmg 694 (941)
T TIGR01517 653 SPLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSMG 694 (941)
T ss_pred CHHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceecC
Confidence 678999999998763 356889999999999999999999998
No 94
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.82 E-value=4.5e-05 Score=91.18 Aligned_cols=108 Identities=21% Similarity=0.246 Sum_probs=72.7
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEe-cCccccCccc------------
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSF-KESISTGEII------------ 451 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~-~~g~~tG~~~------------ 451 (563)
-++||+..+.++.|++.| +.+.+||+. ...-...+-++ |+.....+.+.-.. ++.+.||.-.
T Consensus 645 Dp~r~~v~~aI~~l~~aG---Ikv~MiTGD-~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~ 720 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAG---INVHMLTGD-FPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLK 720 (1053)
T ss_pred cCCchhHHHHHHHHHHCC---CEEEEECCC-CHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHh
Confidence 489999999999999999 999999986 34444444333 65321111110000 0112333110
Q ss_pred -----ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 452 -----EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 452 -----~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
---+++.+|.++++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 721 ~~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIAmg 771 (1053)
T TIGR01523 721 ALCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIAMG 771 (1053)
T ss_pred hcCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEecC
Confidence 0124567999999988763 356789999999999999999999997
No 95
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.80 E-value=0.00011 Score=69.63 Aligned_cols=107 Identities=12% Similarity=0.139 Sum_probs=67.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTG 448 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG 448 (563)
++.+.||+.++++.|+++| ++++|+|.+ +. ..+...+.. ++....++...-...+ .+
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G---~~l~i~TN~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~---~~ 96 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMG---YALVLVTNQ-SGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG---VE 96 (176)
T ss_pred HeEECCCHHHHHHHHHHCC---CEEEEEeCC-ccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc---cc
Confidence 3468899999999999999 999999976 32 233334443 3332222221111110 12
Q ss_pred cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccE
Q 008499 449 EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGI 499 (563)
Q Consensus 449 ~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~gi 499 (563)
++......+--+...+...+++.+.+ ..++++|||+.+|+.+...|++..
T Consensus 97 ~~~~~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 97 EFRQVCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred cccCCCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcE
Confidence 22112222333567777777777653 578999999999999999999854
No 96
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.80 E-value=0.00032 Score=69.22 Aligned_cols=99 Identities=17% Similarity=0.163 Sum_probs=66.0
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc-c--eEEeeccEecCccccCcccccCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA-L--NVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~-~--~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
.+.+.+.||+.+++..|+++| +++.+.|++ ....++..|.. |+.. . .|.+.+ ...|+-.+
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~---i~~avaS~s-~~~~~~~~L~~~gl~~~f~~~v~~~d------v~~~KP~P------ 145 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARG---IPLAVASSS-PRRAAERVLARLGLLDYFDVIVTADD------VARGKPAP------ 145 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcC---CcEEEecCC-hHHHHHHHHHHccChhhcchhccHHH------HhcCCCCC------
Confidence 457899999999999999998 999999988 46678888876 5421 1 111111 11121111
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
--++.. .++.+. .+.++|.|.||.+.+.+.+.||.-++.
T Consensus 146 --d~yL~A-a~~Lgv-~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 146 --DIYLLA-AERLGV-DPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred --HHHHHH-HHHcCC-ChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 122222 333333 357999999999999999999984443
No 97
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.79 E-value=7.1e-05 Score=83.99 Aligned_cols=97 Identities=23% Similarity=0.337 Sum_probs=73.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
+-.++||+.+.++.|+++| .+++.|+|+. .....+.++++ |+. +++++ +.+.+|...
T Consensus 382 ~d~~~~g~~e~l~~L~~~g--~i~v~ivTgd-~~~~a~~i~~~lgi~--~~f~~-----------------~~p~~K~~~ 439 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAG--GIKLVMLTGD-NRSAAEAVAAELGID--EVHAE-----------------LLPEDKLAI 439 (556)
T ss_pred cccchHhHHHHHHHHHHcC--CCeEEEEeCC-CHHHHHHHHHHhCCC--eeecc-----------------CCHHHHHHH
Confidence 4689999999999998753 1789999987 57777777766 652 22221 123478888
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHH
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLR 508 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~ 508 (563)
++++... +.+++|||||.||.+++..||+||.++..+.+.
T Consensus 440 v~~l~~~-----~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 479 (556)
T TIGR01525 440 VKELQEE-----GGVVAMVGDGINDAPALAAADVGIAMGAGSDVA 479 (556)
T ss_pred HHHHHHc-----CCEEEEEECChhHHHHHhhCCEeEEeCCCCHHH
Confidence 8887752 358999999999999999999999998544443
No 98
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.78 E-value=5.5e-05 Score=89.29 Aligned_cols=106 Identities=15% Similarity=0.248 Sum_probs=71.7
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ce-EEeeccEe-cCcccc-----CcccccCCC
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LN-VHANEFSF-KESIST-----GEIIEKVES 456 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~-I~aN~l~~-~~g~~t-----G~~~~~~~~ 456 (563)
++|||..+.++.|++.| +.+.++|+- +..-...+.+. |+.. .. +-+.++.- ++.... -.+-. -++
T Consensus 528 p~r~~~~~~i~~l~~~G---i~v~miTGD-~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~~ 602 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGG---VRIIMITGD-SQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RAS 602 (884)
T ss_pred cchhHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-ECC
Confidence 88999999999999999 999999986 45555555444 6531 11 11222210 000000 00111 145
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
+.+|.++++.+... +..+.++|||.||.++|+.||+||.++
T Consensus 603 P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdVGia~g 643 (884)
T TIGR01522 603 PEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADIGVAMG 643 (884)
T ss_pred HHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCeeEecC
Confidence 67899998887752 467889999999999999999999997
No 99
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.76 E-value=7.5e-05 Score=87.72 Aligned_cols=92 Identities=23% Similarity=0.292 Sum_probs=71.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-.+|||..+.++.+++.| +++.++|+. +....+.+++. |+. +++++ ..+.+|.+.+
T Consensus 649 d~~r~~a~~~i~~L~~~g---i~v~~~Tgd-~~~~a~~ia~~lgi~--~~~~~-----------------~~p~~K~~~i 705 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAG---YRLVMLTGD-NPTTANAIAKEAGID--EVIAG-----------------VLPDGKAEAI 705 (834)
T ss_pred CcchhhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCC--EEEeC-----------------CCHHHHHHHH
Confidence 478999999999999998 999999987 46666666655 553 33321 1234699988
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
+++..+ +..+++||||.||.+++..||+||.+++.+
T Consensus 706 ~~l~~~-----~~~v~~vGDg~nD~~al~~Agvgia~g~g~ 741 (834)
T PRK10671 706 KRLQSQ-----GRQVAMVGDGINDAPALAQADVGIAMGGGS 741 (834)
T ss_pred HHHhhc-----CCEEEEEeCCHHHHHHHHhCCeeEEecCCC
Confidence 887652 457999999999999999999999998553
No 100
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.72 E-value=0.00013 Score=69.91 Aligned_cols=84 Identities=18% Similarity=0.368 Sum_probs=62.4
Q ss_pred HHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCC
Q 008499 396 FQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTD 474 (563)
Q Consensus 396 l~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~ 474 (563)
++.++++| +++.|+|+. ....+..+++. ++. +++. | ...|...++++++..+..
T Consensus 57 i~~L~~~G---i~v~I~T~~-~~~~v~~~l~~lgl~--~~f~-----------g--------~~~k~~~l~~~~~~~gl~ 111 (183)
T PRK09484 57 IRCLLTSG---IEVAIITGR-KSKLVEDRMTTLGIT--HLYQ-----------G--------QSNKLIAFSDLLEKLAIA 111 (183)
T ss_pred HHHHHHCC---CEEEEEeCC-CcHHHHHHHHHcCCc--eeec-----------C--------CCcHHHHHHHHHHHhCCC
Confidence 34455677 999999998 46777777765 542 2221 1 235888999999887763
Q ss_pred CCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 475 RKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 475 ~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
...++|||||.+|+.|+..|++++++++..
T Consensus 112 -~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 112 -PEQVAYIGDDLIDWPVMEKVGLSVAVADAH 141 (183)
T ss_pred -HHHEEEECCCHHHHHHHHHCCCeEecCChh
Confidence 578999999999999999999998776443
No 101
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.67 E-value=0.00033 Score=62.91 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=66.5
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccC-------hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCC
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWC-------GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws-------~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
.+.||+.++++.|+++| ++++|+|.+.. .+.++..++. ++....++ .++. ...
T Consensus 25 ~~~~~v~~~l~~L~~~g---~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~----------~~~~------~~K 85 (132)
T TIGR01662 25 ILYPEVPDALAELKEAG---YKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY----------ACPH------CRK 85 (132)
T ss_pred eeCCCHHHHHHHHHHCC---CEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE----------ECCC------CCC
Confidence 47899999999999988 99999998730 4566777765 54311111 1110 111
Q ss_pred CcHHHHHHHHHHhC-CCCCccEEEEcC-CcCchHHhhhcCc-cEEE
Q 008499 459 DKVQAFNNTLEKYG-TDRKNLSVYIGD-SVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 459 ~K~~~l~~~~~~~~-~~~~~~viyiGD-s~~Dl~~l~~Ad~-givi 501 (563)
-|...+..+++..+ . .+.+++|||| +.+|+.++..+++ +|.+
T Consensus 86 P~~~~~~~~~~~~~~~-~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 86 PKPGMFLEALKRFNEI-DPEESVYVGDQDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred CChHHHHHHHHHcCCC-ChhheEEEcCCCcccHHHHHHCCCeEEEe
Confidence 25577777887773 5 3578999999 7999999999998 4444
No 102
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.66 E-value=5.2e-05 Score=76.77 Aligned_cols=56 Identities=21% Similarity=0.391 Sum_probs=48.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++|++.|++||+++ +.+.+++.|
T Consensus 192 ~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A 248 (270)
T PRK10513 192 DKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVA 248 (270)
T ss_pred CCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhc
Confidence 34678999999999988874 478999999999999999999999998 456777776
No 103
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.65 E-value=0.00094 Score=67.59 Aligned_cols=114 Identities=14% Similarity=0.182 Sum_probs=70.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh---hHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL---IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~---I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
...+-||+.+|++.++++| ++++|||.. +... ....|.. |++... -..+.+.+ ....|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G---~~v~iVTnR-~~~~~~~T~~~Lkk~Gi~~~~--~d~lllr~------------~~~~K 177 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKG---VKIFYVSNR-SEKEKAATLKNLKRFGFPQAD--EEHLLLKK------------DKSSK 177 (266)
T ss_pred CCCcCccHHHHHHHHHHCC---CeEEEEeCC-CcchHHHHHHHHHHcCcCCCC--cceEEeCC------------CCCCc
Confidence 4568899999999999999 999999986 3222 3344444 554210 01111111 12357
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecCc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~~ 523 (563)
..+++.+.+.+ ..+++|||..+|+.-....+ .--. ....+.+...++|-+|+-|.+
T Consensus 178 ~~rr~~I~~~y-----~Ivl~vGD~~~Df~~~~~~~--~~~~~r~~~v~~~~~~fG~~~i~lPN 234 (266)
T TIGR01533 178 ESRRQKVQKDY-----EIVLLFGDNLLDFDDFFYKD--KESQDRQALVLQNQEKFGKKFIILPN 234 (266)
T ss_pred HHHHHHHHhcC-----CEEEEECCCHHHhhhhhccC--cchHHHHHHHHHHHHHhCCCeEEecC
Confidence 77777666532 34789999999995433322 0100 123467777889999987654
No 104
>PRK10976 putative hydrolase; Provisional
Probab=97.62 E-value=6.6e-05 Score=75.85 Aligned_cols=57 Identities=21% Similarity=0.295 Sum_probs=49.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++|++.|++||+++ +.+.+++.|.
T Consensus 186 ~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~ 243 (266)
T PRK10976 186 AGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLP 243 (266)
T ss_pred cCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCC
Confidence 45678999999999988874 478999999999999999999999998 5567877663
No 105
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.61 E-value=0.00023 Score=80.77 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=71.4
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
-++||++...+..|+..| ++++++++- ...-.+.+-+ +++...|+|+- .+.+|.+.++
T Consensus 722 D~vr~~a~~av~~Lk~~G---i~v~mLTGD-n~~aA~svA~-~VGi~~V~aev-----------------~P~~K~~~Ik 779 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMG---IKVVMLTGD-NDAAARSVAQ-QVGIDNVYAEV-----------------LPEQKAEKIK 779 (951)
T ss_pred cccchhHHHHHHHHHhcC---ceEEEEcCC-CHHHHHHHHH-hhCcceEEecc-----------------CchhhHHHHH
Confidence 389999999999999999 999999974 2333333322 23334455544 2457999999
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
++.++ ...+.+||||.||-++|..||+||+++..+
T Consensus 780 ~lq~~-----~~~VaMVGDGINDaPALA~AdVGIaig~gs 814 (951)
T KOG0207|consen 780 EIQKN-----GGPVAMVGDGINDAPALAQADVGIAIGAGS 814 (951)
T ss_pred HHHhc-----CCcEEEEeCCCCccHHHHhhccceeecccc
Confidence 99874 356899999999999999999999998764
No 106
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.60 E-value=0.0002 Score=84.88 Aligned_cols=109 Identities=20% Similarity=0.196 Sum_probs=70.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCcc---cc--------Cc-c
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESI---ST--------GE-I 450 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~---~t--------G~-~ 450 (563)
-++|||..+.++.|++.| +.+.++|+- ...-...+.+. |+.. ..+... .+++.. .. .+ .
T Consensus 536 Dplr~~v~e~I~~l~~aG---I~v~miTGD-~~~tA~~ia~~~gi~~~~~~v~~~--~~~g~~l~~~~~~~~~~~~~~~~ 609 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAG---IRVIMITGD-NKETAEAICRRIGIFSPDEDVTFK--SFTGREFDEMGPAKQRAACRSAV 609 (917)
T ss_pred CCCchhHHHHHHHHHHCC---CEEEEecCC-CHHHHHHHHHHcCCCCCCccccce--eeeHHHHhhCCHHHHHHhhhcCe
Confidence 489999999999999999 999999975 34445554444 5521 111110 011100 00 00 0
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
..--+++.+|.+.++.+.+ . +..+.++|||.||.+|++.||+||+++...
T Consensus 610 v~ar~~P~~K~~iV~~lq~-~----g~~va~iGDG~ND~~alk~AdVGia~g~g~ 659 (917)
T TIGR01116 610 LFSRVEPSHKSELVELLQE-Q----GEIVAMTGDGVNDAPALKKADIGIAMGSGT 659 (917)
T ss_pred EEEecCHHHHHHHHHHHHh-c----CCeEEEecCCcchHHHHHhCCeeEECCCCc
Confidence 0011345688888887653 2 356778999999999999999999998543
No 107
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.59 E-value=0.00034 Score=64.39 Aligned_cols=101 Identities=16% Similarity=0.201 Sum_probs=66.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccCcc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTGEI 450 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~ 450 (563)
.+.||+.++++.|+++| +.++|+|.+ .. ..+...++. ++....++. ....+...
T Consensus 27 ~~~~g~~~~l~~Lk~~g---~~~~I~Sn~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~~~~ 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAG---YTVVVVTNQ-SGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF------CPHHPADN 96 (147)
T ss_pred EEcCChHHHHHHHHHCC---CEEEEEeCC-CcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE------CCCCCCCC
Confidence 57899999999999999 999999986 21 244455544 443111111 10000000
Q ss_pred cccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 451 IEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 451 ~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
....--|...+...++..+. ...+++||||+..|+.+...+++ .|.+
T Consensus 97 ---~~~~KP~~~~~~~~~~~~~~-~~~e~i~IGDs~~Di~~A~~~Gi~~v~i 144 (147)
T TIGR01656 97 ---CSCRKPKPGLILEALKRLGV-DASRSLVVGDRLRDLQAARNAGLAAVLL 144 (147)
T ss_pred ---CCCCCCCHHHHHHHHHHcCC-ChHHEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 01123466788888887765 35789999999999999999998 4444
No 108
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=97.58 E-value=0.00053 Score=64.50 Aligned_cols=86 Identities=10% Similarity=0.034 Sum_probs=56.2
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.+.||+.++++. +.|+|.+ +...+...+++ ++.. ..|++.+. .| ..--
T Consensus 86 ~~~~~~~~g~~~~L~~----------~~i~Tn~-~~~~~~~~l~~~~l~~~fd~v~~~~~-------~~-------~~KP 140 (175)
T TIGR01493 86 YKNLPPWPDSAAALAR----------VAILSNA-SHWAFDQFAQQAGLPWYFDRAFSVDT-------VR-------AYKP 140 (175)
T ss_pred HhcCCCCCchHHHHHH----------HhhhhCC-CHHHHHHHHHHCCCHHHHhhhccHhh-------cC-------CCCC
Confidence 4467899999999982 5689988 68888888876 5531 11222210 00 1111
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
....+...++..+. .+..+++||||..|+.+.+.
T Consensus 141 ~p~~f~~~~~~~~~-~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 DPVVYELVFDTVGL-PPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CHHHHHHHHHHHCC-CHHHeEeEecChhhHHHHhc
Confidence 24556666666665 35789999999999988765
No 109
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.55 E-value=0.0002 Score=63.33 Aligned_cols=89 Identities=21% Similarity=0.241 Sum_probs=59.7
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
.|.+...+.++.|.+. +.++|-|+- ..-++...++- |++...|++ | .....|.+.++
T Consensus 30 klf~ev~e~iqeL~d~----V~i~IASgD-r~gsl~~lae~~gi~~~rv~a-----------~------a~~e~K~~ii~ 87 (152)
T COG4087 30 KLFSEVSETIQELHDM----VDIYIASGD-RKGSLVQLAEFVGIPVERVFA-----------G------ADPEMKAKIIR 87 (152)
T ss_pred EEcHhhHHHHHHHHHh----heEEEecCC-cchHHHHHHHHcCCceeeeec-----------c------cCHHHHHHHHH
Confidence 5666777888888864 788999975 23344443321 332211111 1 12346888888
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++.++ +.++++||||.||.++|..||+||+.-
T Consensus 88 eLkk~-----~~k~vmVGnGaND~laLr~ADlGI~ti 119 (152)
T COG4087 88 ELKKR-----YEKVVMVGNGANDILALREADLGICTI 119 (152)
T ss_pred HhcCC-----CcEEEEecCCcchHHHhhhcccceEEe
Confidence 87763 578999999999999999999997663
No 110
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.52 E-value=9.2e-05 Score=77.84 Aligned_cols=111 Identities=15% Similarity=0.179 Sum_probs=69.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcc----ccChHhhHHHHhC--CCCcceEEeec-cEecCccccCcc-cccCCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSY----CWCGDLIRASFSS--GLNALNVHANE-FSFKESISTGEI-IEKVESP 457 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~----gws~~~I~~~L~~--~l~~~~I~aN~-l~~~~g~~tG~~-~~~~~~g 457 (563)
+.+.||+.+++..|+++| ++++|+|. |+ +.+++..|.. .. ...++.+. +.|+.-.+.... ...+..+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G---~kL~IvTNq~g~G~-~~~~~~~l~~~~~~-i~~iL~~~gl~fd~i~i~~~~~sd~~~~r 103 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAG---YKLVMVTNQDGLGT-DSFPQEDFDPPHNL-MMQIFESQGIKFDEVLICPHFPEDNCSCR 103 (354)
T ss_pred ceECcCHHHHHHHHHhCC---CeEEEEECCccccC-ccccHHHHhhHHHH-HHHHHHHcCCceeeEEEeCCcCcccCCCC
Confidence 689999999999999988 99999998 43 4566665532 00 00011110 001110011000 0122234
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc-EEEc
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG-IVIG 502 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g-ivi~ 502 (563)
..|...+..++...+. .+.+++||||+.+|+.+.+.+++. |.+.
T Consensus 104 KP~p~~l~~a~~~l~v-~~~~svmIGDs~sDi~aAk~aGi~~I~v~ 148 (354)
T PRK05446 104 KPKTGLVEEYLAEGAI-DLANSYVIGDRETDVQLAENMGIKGIRYA 148 (354)
T ss_pred CCCHHHHHHHHHHcCC-CcccEEEEcCCHHHHHHHHHCCCeEEEEE
Confidence 5567788887776654 357899999999999999999994 5553
No 111
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.50 E-value=0.00015 Score=71.42 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=47.4
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+++..+.+ ..+++++|||.||++|++.+|.||+++ +.+.++++|.
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~ 239 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAAD 239 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSS
T ss_pred eCCCCHHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCC
Confidence 34678999999999888764 478999999999999999999999998 4466776653
No 112
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.47 E-value=0.00018 Score=72.57 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=48.9
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+.+.++.+ ..+++++|||.||++|+..|+.||+++ +.+.+++++.
T Consensus 185 ~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~ 242 (264)
T COG0561 185 PKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELAD 242 (264)
T ss_pred cCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCC
Confidence 45678999999999988875 468999999999999999999999998 4467777765
No 113
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.46 E-value=0.00011 Score=74.69 Aligned_cols=78 Identities=15% Similarity=0.146 Sum_probs=58.1
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeee--cCchhHHhHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIP--LYPGLVKKQKE 531 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p--~~~~~~~~~~~ 531 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++||+.|++||+++ +.+.+++.|... .+.+ =..|+...+++
T Consensus 184 ~~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~--~v~~~n~edGva~~l~~ 260 (272)
T PRK15126 184 PVGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHL--PVIGHCRNQAVSHYLTH 260 (272)
T ss_pred cCCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCC--eecCCCcchHHHHHHHH
Confidence 34568999999999988874 478999999999999999999999998 446777666321 1222 12466666766
Q ss_pred hhcC
Q 008499 532 YTEG 535 (563)
Q Consensus 532 ~~~~ 535 (563)
+..+
T Consensus 261 ~~~~ 264 (272)
T PRK15126 261 WLDY 264 (272)
T ss_pred HhcC
Confidence 6543
No 114
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.44 E-value=0.0011 Score=61.92 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=59.2
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccc-cC-hHhhHHHHhC----C--CCcceEEeecc-EecCccccCcccccCCCCC
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYC-WC-GDLIRASFSS----G--LNALNVHANEF-SFKESISTGEIIEKVESPI 458 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~g-ws-~~~I~~~L~~----~--l~~~~I~aN~l-~~~~g~~tG~~~~~~~~g~ 458 (563)
+.||..++++.++++| ++++++|+- |. ....+.+|.. + ++.-.++++.- .+.+ .++++..+ ...
T Consensus 28 ~~~~~~~a~~~l~~~G---~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~--~~~e~i~~--~~~ 100 (157)
T smart00775 28 THPGVAKLYRDIQNNG---YKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAA--LHREVISK--KPE 100 (157)
T ss_pred CCHHHHHHHHHHHHcC---CeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhh--hhcccccC--CHH
Confidence 3588889999999999 999999984 11 1112344433 2 43335554431 1100 12222111 111
Q ss_pred -CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 459 -DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 459 -~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
=|...++++..........-+..+||..+|..+-..+++
T Consensus 101 ~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 101 VFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 277788888764431111223358999999999999987
No 115
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.43 E-value=0.00025 Score=84.69 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=70.2
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceE---Ee----------eccEecCccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNV---HA----------NEFSFKESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I---~a----------N~l~~~~g~~tG~ 449 (563)
-++||+..+.++.++++| +.++++|+- ...-...+.++ |+- +... +. |.-....-+.+|.
T Consensus 567 Dplr~~v~~aI~~l~~~G---i~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~ 642 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAG---IKVIMVTGD-HPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGS 642 (997)
T ss_pred CCChHHHHHHHHHHHHCC---CeEEEECCC-CHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhH
Confidence 489999999999999999 999999986 44444444444 441 1100 00 0000000012221
Q ss_pred ---------cc---c-------cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 450 ---------II---E-------KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 450 ---------~~---~-------~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
+. . --+++.+|.++++.+.+. +..+.++|||.||.+||+.||+||+++
T Consensus 643 ~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-----g~vv~~~GDG~ND~paLk~AdVGiamg 709 (997)
T TIGR01106 643 DLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-----GAIVAVTGDGVNDSPALKKADIGVAMG 709 (997)
T ss_pred HhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHhhCCcceecC
Confidence 10 0 013456899998888752 356779999999999999999999997
No 116
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.39 E-value=0.00085 Score=62.88 Aligned_cols=103 Identities=21% Similarity=0.211 Sum_probs=67.9
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcccc--------------ChHhhHHHHhC-CCCcceEE-eeccEecCccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCW--------------CGDLIRASFSS-GLNALNVH-ANEFSFKESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gw--------------s~~~I~~~L~~-~l~~~~I~-aN~l~~~~g~~tG~ 449 (563)
+.+-||..++++.|+++| ++++|+|..= ....+..+|.. |+....++ |-... .+.
T Consensus 28 ~~~~pgv~e~L~~L~~~g---~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~------~~~ 98 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAG---YKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFP------DDN 98 (161)
T ss_pred eeECCCHHHHHHHHHHCC---CeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCC------CCC
Confidence 578899999999999999 9999999740 12355666665 55411222 20000 001
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
....--|...+..+++..+. ...+++||||+.+|+.++..+++ ++.+.
T Consensus 99 ----~~~~KP~~~~~~~~~~~~~~-~~~e~l~IGD~~~Di~~A~~aGi~~i~~~ 147 (161)
T TIGR01261 99 ----CDCRKPKIKLLEPYLKKNLI-DKARSYVIGDRETDMQLAENLGIRGIQYD 147 (161)
T ss_pred ----CCCCCCCHHHHHHHHHHcCC-CHHHeEEEeCCHHHHHHHHHCCCeEEEEC
Confidence 11112355777777777665 34789999999999999999999 44443
No 117
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.37 E-value=0.00018 Score=70.59 Aligned_cols=55 Identities=20% Similarity=0.289 Sum_probs=46.2
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|++.+++|++++ +.+.+++.+
T Consensus 146 ~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A 201 (225)
T TIGR01482 146 QGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWA 201 (225)
T ss_pred CCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhc
Confidence 4568999999999888764 478999999999999999999999998 445666555
No 118
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.34 E-value=0.00024 Score=70.03 Aligned_cols=55 Identities=24% Similarity=0.346 Sum_probs=46.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++.++.+ ..+++++|||.||++|+..|++|++++ +.+.+++.|
T Consensus 154 ~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a 209 (230)
T PRK01158 154 PGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAA 209 (230)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhc
Confidence 4567999999999888764 478999999999999999999999997 446677655
No 119
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.33 E-value=0.00022 Score=69.78 Aligned_cols=55 Identities=18% Similarity=0.255 Sum_probs=46.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|+..|++|++++ +.+.+++.|
T Consensus 144 ~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A 199 (215)
T TIGR01487 144 KGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIA 199 (215)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhC
Confidence 4668999999999887764 367999999999999999999999998 446677665
No 120
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.30 E-value=0.00042 Score=81.96 Aligned_cols=108 Identities=16% Similarity=0.221 Sum_probs=71.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCcce---EE--eeccEec-CccccC-----ccc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNALN---VH--ANEFSFK-ESISTG-----EII 451 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~~~---I~--aN~l~~~-~g~~tG-----~~~ 451 (563)
.-++||+..+.++.|++.| +.+.+++|- ....-..+++ |+.... ++ ..++..- +..+.- .+-
T Consensus 545 ~Dppr~~v~~aI~~l~~AG---I~v~MiTGD--~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~Vf 619 (917)
T COG0474 545 EDPPREDVKEAIEELREAG---IKVWMITGD--HVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVF 619 (917)
T ss_pred cCCCCccHHHHHHHHHHCC---CcEEEECCC--CHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEE
Confidence 3489999999999999999 999999974 2222233333 542211 11 2222210 100000 011
Q ss_pred ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC
Q 008499 452 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 452 ~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~ 503 (563)
.+ +++..|.++++.+.+. +..|-+.|||.||.+||+.|||||.++.
T Consensus 620 AR-vsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 620 AR-VSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred EE-cCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 12 4678999999988874 3567799999999999999999999985
No 121
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.29 E-value=0.0012 Score=62.71 Aligned_cols=101 Identities=16% Similarity=0.102 Sum_probs=61.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccCh---------------HhhHHHHhC-CCCcceEEeeccEecCccccCc
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCG---------------DLIRASFSS-GLNALNVHANEFSFKESISTGE 449 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~---------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~ 449 (563)
+.+.||+.+++++|+++| +++.|+|.+ +. +.+...|+. ++....++.... ..+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g---~~l~I~Tn~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~------~~~~ 97 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAG---YRVVVATNQ-SGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPH------HPED 97 (181)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEeCC-ccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCC------CCCC
Confidence 357899999999999998 999999975 31 223333332 321111111000 0000
Q ss_pred ccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 450 IIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 450 ~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
.....--+...+...+...+. ...++++|||+.+|+.+...+++.++
T Consensus 98 ---~~~~~KP~p~~~~~~~~~l~~-~~~~~~~VgDs~~Di~~A~~aG~~~i 144 (181)
T PRK08942 98 ---GCDCRKPKPGMLLSIAERLNI-DLAGSPMVGDSLRDLQAAAAAGVTPV 144 (181)
T ss_pred ---CCcCCCCCHHHHHHHHHHcCC-ChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence 001111234566666766665 35789999999999999999998433
No 122
>PLN02887 hydrolase family protein
Probab=97.28 E-value=0.00027 Score=79.05 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=48.6
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
..+.+|...++.+++.++.+ ..+++++|||.||++||+.|++||+++ +.+.+++.|
T Consensus 503 p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~A 559 (580)
T PLN02887 503 PPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVA 559 (580)
T ss_pred cCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhC
Confidence 35678999999999988874 478999999999999999999999998 556777766
No 123
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=97.28 E-value=0.00027 Score=71.47 Aligned_cols=53 Identities=21% Similarity=0.324 Sum_probs=43.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRR 509 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~~ 509 (563)
.+.+|...++.+++..+.+ ..++++||||.||++|++.|++|++++.. +.+++
T Consensus 196 ~~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~ 249 (272)
T PRK10530 196 KGNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKA 249 (272)
T ss_pred CCCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCceEEecCchHHHHH
Confidence 3456999999999888763 47899999999999999999999999733 44543
No 124
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=97.24 E-value=0.0014 Score=64.61 Aligned_cols=99 Identities=11% Similarity=0.082 Sum_probs=68.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc-eEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL-NVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~-~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
...+.||+.++++.++++| ++++|+|.+ +....+..++. +..++ +.+. +.|+.. .+.--+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G---~~l~I~Sn~-s~~~~~~~~~~~~~~~L~~~f~-----------~~fd~~-~g~KP~p~ 156 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLG---LRLAVYSSG-SVPAQKLLFGHSDAGNLTPYFS-----------GYFDTT-VGLKTEAQ 156 (220)
T ss_pred ccCcCcCHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHhhccccchhhhcc-----------eEEEeC-cccCCCHH
Confidence 4679999999999999999 999999998 67666666654 21111 1111 111111 11223456
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEE
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIV 500 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~giv 500 (563)
.+..+++..+.+ +.++++|||+..|+.+...||+..+
T Consensus 157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 777777777653 5789999999999999999998433
No 125
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.24 E-value=0.00041 Score=70.53 Aligned_cols=58 Identities=22% Similarity=0.165 Sum_probs=46.2
Q ss_pred cccCcccccCCC---CCCcHHHHHHHHHHhCCC-CCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 445 ISTGEIIEKVES---PIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 445 ~~tG~~~~~~~~---g~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
..||-+.+.+.. +.+|.++++.++..+... ..-.+|.+|||.||++||..||++|+|.
T Consensus 191 ~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~ 252 (302)
T PRK12702 191 YLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLP 252 (302)
T ss_pred ccccccccccccccCCCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEec
Confidence 357766665666 889999999888765431 2347999999999999999999999995
No 126
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.23 E-value=0.00031 Score=71.40 Aligned_cols=47 Identities=23% Similarity=0.273 Sum_probs=41.9
Q ss_pred CCCCCcHHHHHHHHHHhCC---CCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 455 ESPIDKVQAFNNTLEKYGT---DRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~---~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
..+.+|...++.+++.++. + ..+++++|||.||++||+.|++||+++
T Consensus 183 ~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 183 DASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred cCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 3467899999999998876 3 478999999999999999999999998
No 127
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=97.21 E-value=0.00077 Score=74.69 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=66.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
-++||+..+.++.+++.| +.++++|+. ....... +++.++ ++ ....+.+|.+.++
T Consensus 346 d~lr~~~~~~i~~l~~~g---i~~~~ltGD-~~~~a~~-ia~~lg---i~-----------------~~~~p~~K~~~v~ 400 (499)
T TIGR01494 346 DPLRDDAKETISELREAG---IRVIMLTGD-NVLTAKA-IAKELG---IF-----------------ARVTPEEKAALVE 400 (499)
T ss_pred CCCchhHHHHHHHHHHCC---CeEEEEcCC-CHHHHHH-HHHHcC---ce-----------------eccCHHHHHHHHH
Confidence 489999999999999988 899999986 3333332 222221 11 1145678999988
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++... +..+.++|||.||.+++..||+||+++
T Consensus 401 ~l~~~-----g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 401 ALQKK-----GRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HHHHC-----CCEEEEECCChhhHHHHHhCCCccccc
Confidence 88642 357899999999999999999999997
No 128
>CHL00168 pbsA heme oxygenase; Provisional
Probab=97.19 E-value=0.1 Score=51.95 Aligned_cols=192 Identities=17% Similarity=0.182 Sum_probs=114.8
Q ss_pred hHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC---C-CHHHHHHHHHHHHH
Q 008499 15 GLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA---D-DDDAKLSISELRKG 90 (563)
Q Consensus 15 ~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a---~-~~~~~~~l~~~~~~ 90 (563)
+|+.+|-......-..+-+.+|++.+-.|.++.+.++.+|.|=|+.-.+.-.+........ + ..+...+ ...
T Consensus 4 ~ls~~Lr~~T~~~H~~aE~~~f~k~ll~g~~~~~~Y~~ll~~ly~vY~aLE~~l~~~~~~~~~~~~~~peL~R----~~a 79 (238)
T CHL00168 4 NLATQLREGTTKSHSMAENVSFVKSFLGGVIDKKSYRKLVANLYFVYSAIEEEIEKNKEHPLIKPIYFQELNR----KES 79 (238)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccchhhhh----hHH
Confidence 6888887766555555678999999999999999999999998877665555444432100 0 0111111 112
Q ss_pred HHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHH-HHHHH-H
Q 008499 91 VLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP-CMRLY-A 168 (563)
Q Consensus 91 i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p-C~~~Y-~ 168 (563)
+..-+++ -+|=+..+..+|+|+++.|++.+..++..+. . ++.+ |+-.| .
T Consensus 80 Le~DL~~------l~G~~w~~~~~p~pa~~~Yv~rI~~~~~~~P--------------------~---~LvAH~YvrYLG 130 (238)
T CHL00168 80 LEKDLNY------YYGDDWKSIIEPSPATKIYVDRIHKISAKKP--------------------E---LLIAHAYTRYLG 130 (238)
T ss_pred HHHHHHH------HcCCCccccCCCChHHHHHHHHHHHHhhcCh--------------------H---HHHHHHHHHHHH
Confidence 2222222 2344444567889999999999999996432 2 3444 56667 2
Q ss_pred H------HHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhhcc
Q 008499 169 F------LGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFFCA 242 (563)
Q Consensus 169 ~------ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw~~ 242 (563)
. |.+.+.+..+. ++..=-.+.+++.-++-...-...++.+|++ .+++++++++.+-=..+-.+-...|.+
T Consensus 131 dlsGGQiI~k~l~r~~gl--~~~~G~~Fy~F~~i~~~~~fk~~yr~~Ld~l--~l~e~e~~~iI~EA~~AF~lN~~vf~e 206 (238)
T CHL00168 131 DLSGGQILKKIAQRAMNL--SDSGGLAFYDFDNIEDDQEFKQIYKAALDNL--PLSDDQIQNIIAEANIAFNLNMKMFQE 206 (238)
T ss_pred hccccHHHHHHHHHHhCC--CCCcCccccCCCCcCcHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22333333221 1111122223333234567777888899976 478888888777666666666665554
Q ss_pred C
Q 008499 243 Q 243 (563)
Q Consensus 243 a 243 (563)
-
T Consensus 207 L 207 (238)
T CHL00168 207 L 207 (238)
T ss_pred H
Confidence 3
No 129
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=97.17 E-value=0.00095 Score=80.35 Aligned_cols=45 Identities=22% Similarity=0.222 Sum_probs=37.2
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++.+|.+.++.+.+. +..|-++|||.||.++|+.||+||.++..
T Consensus 785 ~sP~qK~~iV~~lq~~-----g~~V~m~GDG~ND~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 785 MAPDQKETLVELLQKL-----DYTVGMCGDGANDCGALKQADVGISLSEA 829 (1054)
T ss_pred cCHHHHHHHHHHHHhC-----CCeEEEEeCChHHHHHHHhcCcceeeccc
Confidence 4567888888887752 45678999999999999999999999843
No 130
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.15 E-value=0.018 Score=56.38 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=66.7
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCccccCcccccCCCCCCc-
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESISTGEIIEKVESPIDK- 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~~tG~~~~~~~~g~~K- 460 (563)
.+...|+..++++.++++ .+++|+|.| ........|.. |+.. ..|++.+- .| ..|
T Consensus 97 ~~~~~~~~~~~L~~l~~~----~~l~ilTNg-~~~~~~~~l~~~gl~~~Fd~v~~s~~-------~g---------~~KP 155 (229)
T COG1011 97 LLPDYPEALEALKELGKK----YKLGILTNG-ARPHQERKLRQLGLLDYFDAVFISED-------VG---------VAKP 155 (229)
T ss_pred hCccChhHHHHHHHHHhh----ccEEEEeCC-ChHHHHHHHHHcCChhhhheEEEecc-------cc---------cCCC
Confidence 378889999999998865 689999998 46677777776 6421 12222221 11 223
Q ss_pred -HHHHHHHHHHhCCCCCccEEEEcCCcCch-HHhhhcCc-cEEEcC
Q 008499 461 -VQAFNNTLEKYGTDRKNLSVYIGDSVGDL-LCLLEADI-GIVIGS 503 (563)
Q Consensus 461 -~~~l~~~~~~~~~~~~~~viyiGDs~~Dl-~~l~~Ad~-givi~~ 503 (563)
.++++..++..+.+ +..+++||||.... .....+|. +|.+..
T Consensus 156 ~~~~f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~ 200 (229)
T COG1011 156 DPEIFEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINR 200 (229)
T ss_pred CcHHHHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECC
Confidence 25666677776654 57899999987655 99999998 666653
No 131
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.14 E-value=0.00053 Score=68.10 Aligned_cols=58 Identities=22% Similarity=0.233 Sum_probs=48.4
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQ 513 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~ 513 (563)
..+.+|...++.+++..+.+ ...++++|||.||++|+..+++||+++ +.+.+++.+..
T Consensus 155 ~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~ 213 (236)
T TIGR02471 155 PLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQ 213 (236)
T ss_pred eCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcC
Confidence 34678999999999888763 468999999999999999999999997 45678877654
No 132
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=97.13 E-value=0.00042 Score=63.93 Aligned_cols=92 Identities=13% Similarity=0.062 Sum_probs=59.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
.+.+|||+.+|+++++ ++ +++.|+|.+ +.++++.++.. ++.. ..|++.+ ... ..|
T Consensus 43 ~v~l~pG~~e~L~~L~-~~---~~l~I~Ts~-~~~~~~~il~~l~~~~~~f~~i~~~~-----d~~-----------~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-EL---FELVVFTAG-LRMYADPVLDLLDPKKYFGYRRLFRD-----ECV-----------FVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hc---cEEEEEeCC-cHHHHHHHHHHhCcCCCEeeeEEECc-----ccc-----------ccC
Confidence 5688999999999998 46 899999999 78888888876 4421 1122211 110 112
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+++. ++..+. .+.++|+||||.+|+.+...++ |.+
T Consensus 102 P~~~k~-l~~l~~-~p~~~i~i~Ds~~~~~aa~~ng--I~i 138 (148)
T smart00577 102 GKYVKD-LSLLGR-DLSNVIIIDDSPDSWPFHPENL--IPI 138 (148)
T ss_pred CeEeec-HHHcCC-ChhcEEEEECCHHHhhcCccCE--EEe
Confidence 112222 222333 3578999999999999877775 444
No 133
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.07 E-value=0.00054 Score=68.96 Aligned_cols=49 Identities=29% Similarity=0.260 Sum_probs=41.7
Q ss_pred CCCCcHHHHHHHHHHhCCC-CCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+..|...++.+++.++.+ ....++++|||.||++|+..||+||++++.
T Consensus 173 ~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 173 AGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 4568999999999887753 146899999999999999999999999855
No 134
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.06 E-value=0.0019 Score=72.96 Aligned_cols=106 Identities=18% Similarity=0.219 Sum_probs=74.6
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCc-ccc-----------
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGE-IIE----------- 452 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~-~~~----------- 452 (563)
-+.||+..+-++.|++.| +.+++|++- +..--.++-++ | ++++.-++.+-.+||+ |+.
T Consensus 583 DPPR~ev~~ai~~c~~aG---IrV~mITGD-~~~TA~AI~r~iG-----i~~~~ed~~~~~~TG~efD~ls~~~~~~~~~ 653 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAG---IRVIMITGD-NKETAEAIAREIG-----IFSEDEDVSSMALTGSEFDDLSDEELDDAVR 653 (972)
T ss_pred CCCchhHHHHHHHHHHcC---CEEEEEcCC-CHHHHHHHHHHhC-----CCcCCccccccccchhhhhcCCHHHHHHHhh
Confidence 489999999999999999 999999985 34433333333 4 3444433333345552 220
Q ss_pred -----cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CCh
Q 008499 453 -----KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSS 505 (563)
Q Consensus 453 -----~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~ 505 (563)
--+.+..|.++++.+.+. +.-+-.-|||+||-++|+.|||||++| ...
T Consensus 654 ~~~vFaR~~P~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~AdIGIAMG~~GT 707 (972)
T KOG0202|consen 654 RVLVFARAEPQHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKKADIGIAMGISGT 707 (972)
T ss_pred cceEEEecCchhHHHHHHHHHhc-----CCEEEecCCCccchhhhhhcccceeecCCcc
Confidence 024567899999988763 345557999999999999999999999 443
No 135
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.04 E-value=0.00077 Score=66.09 Aligned_cols=45 Identities=29% Similarity=0.271 Sum_probs=39.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+.+|...++.+++..+.+ ..+++++|||.||++|+..|++||++
T Consensus 176 ~~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEEe
Confidence 4556999999999888764 57899999999999999999999986
No 136
>cd00232 HemeO Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme. Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes bacterial HO, as well as the mammalian isoforms HO-1, and HO-2. Heme oxygenases play key roles in heme homeostasis, oxidative stress response, photosynthetic pigment formation in cyanobacteria, cellular signaling in mammals, and iron acquisition from host heme by bacterial pathogens.
Probab=96.96 E-value=0.14 Score=49.51 Aligned_cols=186 Identities=16% Similarity=0.057 Sum_probs=110.4
Q ss_pred HHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHH
Q 008499 16 LARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECAD----DDDAKLSISELRKGV 91 (563)
Q Consensus 16 ~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~----~~~~~~~l~~~~~~i 91 (563)
|+.+|-......-...-+|||++.|..|+++.+.++.||.+-|.+....-+.+........ ..+...... .+
T Consensus 2 ~~~~Lr~~T~~~H~~~e~~~~~~~l~~~~~s~~~Y~~~L~~~~~~~~~lE~~l~~~~~~~~~~~~~~~~~~r~~----~L 77 (203)
T cd00232 2 LSEELRAATRQLHEEAENLVFMKDLLKGFLSREGYARFLANLYLVYRALEALLEASKDNPYLAPLYLPELERAA----AL 77 (203)
T ss_pred HHHHHHHHHHHHHHHHHchHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccCccccchH----HH
Confidence 5566665544433444579999999999999999999999999999988887776543211 111111111 11
Q ss_pred HHHHHHHHHHHHHhCCCccc-ccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHH---
Q 008499 92 LEELKMHDSFVKEWGTDLAK-MATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLY--- 167 (563)
Q Consensus 92 ~~E~~~h~~~~~~~gi~~~~-~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y--- 167 (563)
..- ++.+|.+... ...|.+++ .|.+++...+..+ ++.++++++.-+-.=
T Consensus 78 ~~D-------L~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------------------~~~~lg~~YV~egs~l~G 130 (203)
T cd00232 78 EKD-------LAYLGGSDWRVREPPLPAA-AYAARLREIAEEN-------------------PALLLGHAYVRYGADLSG 130 (203)
T ss_pred HHH-------HHHHhCCCccccCCCChHH-HHHHHHHHHHhcC-------------------HHHHHHHHHHHHHHHhcc
Confidence 111 2345555432 33456677 9999888776543 256677777665321
Q ss_pred -HHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Q 008499 168 -AFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEV 237 (563)
Q Consensus 168 -~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~ 237 (563)
..|.+++.+..+. + ..=..+...|+.++-...-..+.+.+|++ ..++++.+++.+-=..+-++=.
T Consensus 131 G~~i~~~l~~~~~~--~-~~~~~f~~~~g~~~~~~~w~~f~~~l~~~--~~~~~~~~~~i~~A~~~F~~~~ 196 (203)
T cd00232 131 GQVLAKIAQRALLL--E-GKGLAFYAFHGIADRGLFKREFREALDAL--PLDEEERQRVVAEARAAFRLNG 196 (203)
T ss_pred cHHHHHHHHHHhCC--C-CccCccccCCCcCCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 2233344443321 1 12234556666455666777788888886 3577777766555554444433
No 137
>PRK06769 hypothetical protein; Validated
Probab=96.96 E-value=0.0043 Score=58.73 Aligned_cols=101 Identities=16% Similarity=0.190 Sum_probs=62.3
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh--------hHHHHhC-CCCcceEEeeccEecCccccCcccccCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL--------IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVES 456 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~--------I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~ 456 (563)
+.+.||+.+++++|+++| +++.|+|.+ +... +...++. ++. .++. ....++. ....
T Consensus 27 ~~~~pgv~e~L~~Lk~~G---~~l~I~Tn~-~~~~~~~~~~~~~~~~l~~~g~~--~~~~------~~~~~~~---~~~~ 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANH---IKIFSFTNQ-PGIADGIATIADFVQELKGFGFD--DIYL------CPHKHGD---GCEC 91 (173)
T ss_pred eEECCCHHHHHHHHHHCC---CEEEEEECC-chhcCCcCCHHHHHHHHHhCCcC--EEEE------CcCCCCC---CCCC
Confidence 457899999999999999 999999975 2210 1112322 331 2110 0000010 0011
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
.--+...+...+++.+. .+.++++|||+.+|+.+...|++ +|.+.
T Consensus 92 ~KP~p~~~~~~~~~l~~-~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGL-DLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred CCCCHHHHHHHHHHcCC-CHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 12245667777776665 35789999999999999999998 44443
No 138
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.95 E-value=0.0041 Score=58.57 Aligned_cols=92 Identities=14% Similarity=0.165 Sum_probs=61.0
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChH------------hhHHHHhC-CCCcceEEeeccEecCccccCcccccC
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGD------------LIRASFSS-GLNALNVHANEFSFKESISTGEIIEKV 454 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~------------~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~ 454 (563)
+-||+.++|+.|+++| +++.|+|.+ +.. .+..+|+. |+....+++.. + +
T Consensus 43 ~~pgv~e~L~~Lk~~G---~~l~I~TN~-~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~----~----~------ 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEG---YKIVIFTNQ-SGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH----A----G------ 104 (166)
T ss_pred ecCCHHHHHHHHHHCC---CEEEEEeCC-cccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC----C----C------
Confidence 5689999999999999 999999986 231 35566665 55322222211 0 0
Q ss_pred CCCCCcHHHHHHHHHHhC--CCCCccEEEEcCCc--------CchHHhhhcCcc
Q 008499 455 ESPIDKVQAFNNTLEKYG--TDRKNLSVYIGDSV--------GDLLCLLEADIG 498 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~--~~~~~~viyiGDs~--------~Dl~~l~~Ad~g 498 (563)
...--+...+....+..+ . ...+++||||+. +|+.+...||+.
T Consensus 105 ~~~KP~p~~~~~~~~~~~~~~-~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 105 LYRKPMTGMWEYLQSQYNSPI-KMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CCCCCccHHHHHHHHHcCCCC-CchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 011123456677777665 3 347899999997 599999999864
No 139
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.93 E-value=0.00094 Score=67.08 Aligned_cols=56 Identities=21% Similarity=0.363 Sum_probs=45.9
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVG 511 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~ 511 (563)
..+.+|...++.+++..+.+ ..+++++|||.||++|+..|++|+++++ .+.+++.|
T Consensus 184 ~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a 240 (256)
T TIGR00099 184 AKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALA 240 (256)
T ss_pred CCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhC
Confidence 34678999999999987763 4789999999999999999999999973 34555444
No 140
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.88 E-value=0.0057 Score=57.73 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=64.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccC-hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWC-GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws-~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
...+.||+.++++.|+++| .+++|+|.+ + ...+...++. ++ ..+ .+ ..--+..
T Consensus 41 ~~~~~pgv~e~L~~Lk~~g---~~l~I~Sn~-~~~~~~~~~~~~~gl---~~~-----------~~-------~~KP~p~ 95 (170)
T TIGR01668 41 HNEAYPALRDWIEELKAAG---RKLLIVSNN-AGEQRAKAVEKALGI---PVL-----------PH-------AVKPPGC 95 (170)
T ss_pred CCCcChhHHHHHHHHHHcC---CEEEEEeCC-chHHHHHHHHHHcCC---EEE-----------cC-------CCCCChH
Confidence 3578899999999999998 999999987 4 3555544432 32 111 01 1112445
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
.+...+++.+.. +.++++|||+. +|+.+...+++ .|.+.
T Consensus 96 ~~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 96 AFRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred HHHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 677777776653 57899999998 79999999999 55554
No 141
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=96.86 E-value=0.0018 Score=69.45 Aligned_cols=109 Identities=19% Similarity=0.302 Sum_probs=75.7
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
.+.||.+|-|..+|+.| ++.+.+++- ..+--..++. |++ .|.. .+++.+|.+.+
T Consensus 447 ivK~Gi~ERf~elR~Mg---IkTvM~TGD--N~~TAa~IA~EAGVD------------------dfiA-eatPEdK~~~I 502 (681)
T COG2216 447 IVKPGIKERFAELRKMG---IKTVMITGD--NPLTAAAIAAEAGVD------------------DFIA-EATPEDKLALI 502 (681)
T ss_pred hcchhHHHHHHHHHhcC---CeEEEEeCC--CHHHHHHHHHHhCch------------------hhhh-cCChHHHHHHH
Confidence 67888899999999888 888888863 3344444443 332 1221 35678999999
Q ss_pred HHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhHHh
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKK 528 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~~~ 528 (563)
++...+ +..+-..|||.||-|+|..||+|++++....-+ +..-+.+-++++..|.
T Consensus 503 ~~eQ~~-----grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAA----kEAaNMVDLDS~PTKl 557 (681)
T COG2216 503 RQEQAE-----GRLVAMTGDGTNDAPALAQADVGVAMNSGTQAA----KEAANMVDLDSNPTKL 557 (681)
T ss_pred HHHHhc-----CcEEEEcCCCCCcchhhhhcchhhhhccccHHH----HHhhcccccCCCccce
Confidence 887763 345668999999999999999999998665322 2233667777644433
No 142
>PLN02382 probable sucrose-phosphatase
Probab=96.84 E-value=0.0017 Score=70.14 Aligned_cols=57 Identities=23% Similarity=0.223 Sum_probs=46.8
Q ss_pred CCCCCcHHHHHHHHHHh---CCCCCccEEEEcCCcCchHHhhhcC-ccEEEc-CChhHHHHHH
Q 008499 455 ESPIDKVQAFNNTLEKY---GTDRKNLSVYIGDSVGDLLCLLEAD-IGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~---~~~~~~~viyiGDs~~Dl~~l~~Ad-~givi~-~~~~L~~~~~ 512 (563)
..+.+|...++.+++.. +.+ ..+++++|||.||++||..++ +||+++ +.+.+++.+.
T Consensus 171 p~g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~ 232 (413)
T PLN02382 171 PQGAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYA 232 (413)
T ss_pred eCCCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHH
Confidence 34668999999999887 553 468999999999999999999 699998 4467877653
No 143
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.78 E-value=0.0015 Score=64.64 Aligned_cols=47 Identities=28% Similarity=0.333 Sum_probs=39.3
Q ss_pred CCCCcHHHHHHHHHHhCCC-CCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTD-RKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~-~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
.+.+|...++.++...+.. ....++++|||.||++|++.||+||+++
T Consensus 178 ~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 178 GGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLVG 225 (225)
T ss_pred CCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEecC
Confidence 3778999999998876542 2347999999999999999999999985
No 144
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.74 E-value=0.0056 Score=56.82 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=61.2
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccc--cChHhhHHHHhC------CCCcceEEeeccEecCccccCcccccCCCCC
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYC--WCGDLIRASFSS------GLNALNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~g--ws~~~I~~~L~~------~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
..++|+.++++.+.++| +.++-+|+- |-....+.+|.. +++.=.|+.+.-..- +.++.+...+ ....
T Consensus 27 ~~h~g~~~l~~~i~~~G---Y~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~-~al~rEvi~~-~p~~ 101 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNG---YKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLF-SALHREVISK-DPEE 101 (157)
T ss_pred hhhhcHHHHHHHHHHCC---eEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchh-hhhhcccccc-ChHH
Confidence 45678888888888888 888888862 113344445543 344334555531100 0111122111 0123
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
-|...|+.++.........-...+|...+|..+-..+++
T Consensus 102 fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 102 FKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 588889888875321112233469999999999999987
No 145
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.68 E-value=0.012 Score=55.79 Aligned_cols=109 Identities=7% Similarity=0.016 Sum_probs=63.4
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
...+.+.||+.++++.|+++| +++.|+|.+=....++..|.. ++. +.. +.+.-.| +.+.++. . ....
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G---~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~-~~~~~~F-d~iv~~~---~--~~~~ 110 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAG---TYLATASWNDVPEWAYEILGTFEITYAGKT-VPMHSLF-DDRIEIY---K--PNKA 110 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCC---CEEEEEeCCCChHHHHHHHHhCCcCCCCCc-ccHHHhc-eeeeecc---C--CchH
Confidence 346789999999999999999 999999965125566666665 432 000 0000001 1111111 0 0111
Q ss_pred cH--HHHHHHHHHh--CCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 460 KV--QAFNNTLEKY--GTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 460 K~--~~l~~~~~~~--~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
|. ..++.+.... +. .+.+++||||+..|+.+...+++-++..
T Consensus 111 kp~~~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 111 KQLEMILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred HHHHHHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 21 1222222211 22 3578999999999999999999854443
No 146
>PLN03190 aminophospholipid translocase; Provisional
Probab=96.68 E-value=0.0047 Score=74.73 Aligned_cols=46 Identities=22% Similarity=0.401 Sum_probs=35.5
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++..|.++++-+.+.. +..+.++|||.||.+|++.|||||.+..+
T Consensus 854 ~sP~QKa~IV~~vk~~~----~~vtlaIGDGaNDv~mIq~AdVGIGIsG~ 899 (1178)
T PLN03190 854 VAPLQKAGIVALVKNRT----SDMTLAIGDGANDVSMIQMADVGVGISGQ 899 (1178)
T ss_pred CCHHHHHHHHHHHHhcC----CcEEEEECCCcchHHHHHhcCeeeeecCc
Confidence 35568888777665431 24678999999999999999999987544
No 147
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.68 E-value=0.0051 Score=74.22 Aligned_cols=46 Identities=26% Similarity=0.375 Sum_probs=36.5
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
+++.+|.+.++.+.+.. +..+.++|||.||.+||+.|||||.+..+
T Consensus 751 ~sP~qK~~IV~~lk~~~----~~~vl~iGDG~ND~~mlk~AdVGIgi~g~ 796 (1057)
T TIGR01652 751 VSPSQKADVVRLVKKST----GKTTLAIGDGANDVSMIQEADVGVGISGK 796 (1057)
T ss_pred CCHHHHHHHHHHHHhcC----CCeEEEEeCCCccHHHHhhcCeeeEecCh
Confidence 44578888888776531 35688999999999999999999988544
No 148
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.62 E-value=0.0025 Score=64.83 Aligned_cols=51 Identities=29% Similarity=0.306 Sum_probs=42.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCC-ccEEEEcCCcCchHHhhhcCccEEEcC-ChhHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRK-NLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLR 508 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~-~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~ 508 (563)
.+ +|...++.+.+..+.+ . ..+++||||.||++|+..|++|+++++ .+.++
T Consensus 188 ~~-~Kg~al~~l~~~~~i~-~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 188 GG-DKGKAVRWLKELYRRQ-DGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CC-CHHHHHHHHHHHHhcc-CCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 45 7999999999887763 6 789999999999999999999999984 34444
No 149
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.60 E-value=0.0051 Score=61.62 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=45.9
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh-cCccEEEc-CChhHHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE-ADIGIVIG-SSSSLRRVGS 512 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~-Ad~givi~-~~~~L~~~~~ 512 (563)
.+.+|...++.+++.++.+ ..+++++|||.||++|+.. ++.+|+++ +.+.+++.+.
T Consensus 164 ~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~ 221 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYD 221 (249)
T ss_pred CCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHH
Confidence 4668999999999887763 5789999999999999998 66799997 4456776654
No 150
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.58 E-value=0.005 Score=56.42 Aligned_cols=89 Identities=19% Similarity=0.362 Sum_probs=62.9
Q ss_pred HHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCC
Q 008499 397 QKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDR 475 (563)
Q Consensus 397 ~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~ 475 (563)
+.+.+.| +.+.|+|+- .+..++...+. |+.. .+.| ..+|..++++++.+.+.+
T Consensus 45 k~l~~~G---i~vAIITGr-~s~ive~Ra~~LGI~~-------------~~qG--------~~dK~~a~~~L~~~~~l~- 98 (170)
T COG1778 45 KLLLKSG---IKVAIITGR-DSPIVEKRAKDLGIKH-------------LYQG--------ISDKLAAFEELLKKLNLD- 98 (170)
T ss_pred HHHHHcC---CeEEEEeCC-CCHHHHHHHHHcCCce-------------eeec--------hHhHHHHHHHHHHHhCCC-
Confidence 3445557 999999986 34455554443 4421 1222 247999999999998874
Q ss_pred CccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHH
Q 008499 476 KNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVG 511 (563)
Q Consensus 476 ~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~ 511 (563)
+.++.||||-.+|++++..++++++.. +.+-++..|
T Consensus 99 ~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a 135 (170)
T COG1778 99 PEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRA 135 (170)
T ss_pred HHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhh
Confidence 589999999999999999999887776 334444333
No 151
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.55 E-value=0.02 Score=55.01 Aligned_cols=117 Identities=15% Similarity=0.230 Sum_probs=62.0
Q ss_pred ccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 384 ERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 384 ~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.+++.-||+.|.++.|.+.| ...++|++.- ... ...+-..|.+-
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g---~~~~~Itar~-~~~--------------------------------~~~~~~~k~~W 113 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKG---HEIVIITARP-PEF--------------------------------PDHSAEEKREW 113 (191)
T ss_dssp TT--B-TTHHHHHHHHHTST---TEEEEEEE-S-SSS--------------------------------GCCCHHHHHHH
T ss_pred cCCCccHHHHHHHHHHHHcC---CcEEEEEecC-ccc--------------------------------cchHHHHHHHH
Confidence 35778899999999999887 6777777631 100 00011134454
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecCchhHHhHHhhhcCCCCccccc
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEK 543 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~~~ 543 (563)
|++..... ...++++.||- . +..+| +.|-+++.-.+-+...|++.+=|..- |.+.
T Consensus 114 l~~hf~~i---~~~~~~~~~~K----~-~v~~D--vlIDD~~~n~~~~~~~g~~~iLfd~p---------------~Nr~ 168 (191)
T PF06941_consen 114 LERHFPFI---PYDNLIFTGDK----T-LVGGD--VLIDDRPHNLEQFANAGIPVILFDQP---------------YNRD 168 (191)
T ss_dssp HHHHHTHH---HHCCEEEESSG----G-GC--S--EEEESSSHHHSS-SSESSEEEEE--G---------------GGTT
T ss_pred HHHHcCCC---chheEEEecCC----C-eEecc--EEecCChHHHHhccCCCceEEEEcCC---------------CCCC
Confidence 55543211 12345665542 2 33466 67766665555566677776655421 2222
Q ss_pred cCeEEEeCCHHHHHHhHh
Q 008499 544 SGILYTVSSWAEVHAFIL 561 (563)
Q Consensus 544 ~~~ly~~~~W~~i~~~~~ 561 (563)
-...++|.||.||.++|+
T Consensus 169 ~~~~~Rv~~W~ei~~~i~ 186 (191)
T PF06941_consen 169 ESNFPRVNNWEEIEDLIL 186 (191)
T ss_dssp --TSEEE-STTSHHHHHH
T ss_pred CCCCccCCCHHHHHHHHH
Confidence 226899999999988774
No 152
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.51 E-value=0.0076 Score=54.10 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=61.8
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceE--EeeccEecCccccCcccccCCCCCCcHHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNV--HANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I--~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
.+.||+.++++.++++| +++.|+|.++...++...++. + ....+ +..-+ +...+|. ...|.+.
T Consensus 29 ~~~~gv~e~L~~Lk~~g---~~l~i~Sn~~~~~~~~~~l~~~~-~~~~i~~l~~~f---~~~~~~~-------~~pkp~~ 94 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNG---FLLALASYNDDPHVAYELLKIFE-DFGIIFPLAEYF---DPLTIGY-------WLPKSPR 94 (128)
T ss_pred HHHHHHHHHHHHHHHCC---eEEEEEeCCCCHHHHHHHHHhcc-ccccchhhHhhh---hhhhhcC-------CCcHHHH
Confidence 68899999999999999 999999998667777777664 3 00000 11111 1111111 1136777
Q ss_pred HHHHHHHhC--CCCCccEEEEcCCcCchHHhh
Q 008499 464 FNNTLEKYG--TDRKNLSVYIGDSVGDLLCLL 493 (563)
Q Consensus 464 l~~~~~~~~--~~~~~~viyiGDs~~Dl~~l~ 493 (563)
+...++..+ . .+.+++||||+..|+....
T Consensus 95 ~~~a~~~lg~~~-~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 95 LVEIALKLNGVL-KPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred HHHHHHHhcCCC-CcceEEEECCCHhHHHHHH
Confidence 777777777 5 3588999999999987654
No 153
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.41 E-value=0.012 Score=60.63 Aligned_cols=105 Identities=4% Similarity=-0.151 Sum_probs=65.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCCCcH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPIDKV 461 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~ 461 (563)
..+.||+.++++.++++| ++++|+|+. +....+..++. ++.+ ..|++-. .+..+......+..+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g---~~i~i~T~r-~~~~~~~~l~~l~~~~~~f~~i~~~~-------~~~~~~~~~~~~kp~p 254 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAG---YEIIVVSGR-DGVCEEDTVEWLRQTDIWFDDLIGRP-------PDMHFQREQGDKRPDD 254 (300)
T ss_pred CCCChhHHHHHHHHHhCC---CEEEEEeCC-ChhhHHHHHHHHHHcCCchhhhhCCc-------chhhhcccCCCCCCcH
Confidence 467899999999999998 999999998 57777777765 3321 1111111 0001111111112223
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
..+...+.+.+...+..++||||+.+|+.+...+++.++-
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~ 294 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQ 294 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEE
Confidence 3444444443332347899999999999999999985443
No 154
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.39 E-value=0.0074 Score=60.60 Aligned_cols=48 Identities=29% Similarity=0.416 Sum_probs=38.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+.+|..+++-++..++.+ ..+++++|||-||++||..+..||++++.
T Consensus 162 ~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL~~~~~~vvV~Na 209 (247)
T PF05116_consen 162 KGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEMLEGGDHGVVVGNA 209 (247)
T ss_dssp TT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHHCCSSEEEE-TTS
T ss_pred CCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHHcCcCCEEEEcCC
Confidence 4556999999999988764 47899999999999999888889999844
No 155
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.09 E-value=0.005 Score=59.46 Aligned_cols=45 Identities=20% Similarity=0.270 Sum_probs=39.1
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+.+|...++.+++..+.+ ...++++|||.||+.|+..++++|++
T Consensus 160 ~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5678999999999887653 46899999999999999999998875
No 156
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.02 E-value=0.0082 Score=67.66 Aligned_cols=48 Identities=23% Similarity=0.137 Sum_probs=40.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEE--cCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYI--GDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyi--GDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.+.+|..+++.+++.++... ..++.+ |||.||++||..||+||+++..
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~-~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNF-GNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCc-cceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 47799999999998877542 456666 9999999999999999999744
No 157
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.99 E-value=0.28 Score=48.69 Aligned_cols=100 Identities=24% Similarity=0.341 Sum_probs=64.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcH--
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKV-- 461 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~-- 461 (563)
...+-+|+.++++++|+.| ..+.|+|- + ++-.+..+.. ++. ..||--+.. ..-|..|.
T Consensus 111 ~~~~~~~~~~~lq~lR~~g---~~l~iisN-~-d~r~~~~l~~~~l~--------~~fD~vv~S------~e~g~~KPDp 171 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKG---TILGIISN-F-DDRLRLLLLPLGLS--------AYFDFVVES------CEVGLEKPDP 171 (237)
T ss_pred CceeccHHHHHHHHHHhCC---eEEEEecC-C-cHHHHHHhhccCHH--------Hhhhhhhhh------hhhccCCCCh
Confidence 4567788899999999998 88888884 3 5556655544 431 111111111 12233342
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc-cEEEcCC
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGSS 504 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-givi~~~ 504 (563)
++++-.++..+. .+..+++|||+ .||+..++.+|. ++.+.++
T Consensus 172 ~If~~al~~l~v-~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 172 RIFQLALERLGV-KPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred HHHHHHHHHhCC-ChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 455555555554 36889999997 588999999998 7777644
No 158
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=95.92 E-value=0.1 Score=52.58 Aligned_cols=112 Identities=13% Similarity=0.131 Sum_probs=72.7
Q ss_pred HHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC----CCCcceE-EeeccE-----ecCccccC
Q 008499 379 IKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS----GLNALNV-HANEFS-----FKESISTG 448 (563)
Q Consensus 379 i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~----~l~~~~I-~aN~l~-----~~~g~~tG 448 (563)
+.+......+.+.+.++++.++++| ++++.+|..+ ..+....++. |++...- +.++-. +.+.....
T Consensus 73 i~~~~~~~lie~~~~~~i~~lq~~~---~~v~alT~~~-~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~ 148 (252)
T PF11019_consen 73 IFELRKMELIESDVPNIINSLQNKG---IPVIALTARG-PNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRA 148 (252)
T ss_pred HHhhcceEEcchhHHHHHHHHHHCC---CcEEEEcCCC-hhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCC
Confidence 3445556678889999999999999 9999999984 6677776665 4421111 111111 11110000
Q ss_pred cc-c-cc-CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 449 EI-I-EK-VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 449 ~~-~-~~-~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
.+ . |- .++|.+|...|..++...+. .+.++|||-|+.-.+..+..|
T Consensus 149 ~~~~~GIlft~~~~KG~~L~~fL~~~~~-~pk~IIfIDD~~~nl~sv~~a 197 (252)
T PF11019_consen 149 PSFYDGILFTGGQDKGEVLKYFLDKINQ-SPKKIIFIDDNKENLKSVEKA 197 (252)
T ss_pred ceeecCeEEeCCCccHHHHHHHHHHcCC-CCCeEEEEeCCHHHHHHHHHH
Confidence 00 0 11 35678999999999988765 467899999999888766653
No 159
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=95.80 E-value=0.0086 Score=60.80 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=41.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc----CccEEEcCCh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA----DIGIVIGSSS 505 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A----d~givi~~~~ 505 (563)
.+.+|...++++++..+.. ...++|+||+.||+.|+..+ ++||.++...
T Consensus 171 ~g~~Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~ 223 (266)
T PRK10187 171 RGTNKGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA 223 (266)
T ss_pred CCCCHHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC
Confidence 4678999999999987653 46799999999999999999 8899998553
No 160
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.44 E-value=0.047 Score=62.07 Aligned_cols=126 Identities=19% Similarity=0.210 Sum_probs=74.0
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CC--CcceEEeec-cEecC---c---cccCccc-cc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GL--NALNVHANE-FSFKE---S---ISTGEII-EK 453 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l--~~~~I~aN~-l~~~~---g---~~tG~~~-~~ 453 (563)
+-+.|||..+-++.|+..| +.+-.|++. +-.--+++-.+ |+ ++....|-+ -+|.+ . ..-+++. --
T Consensus 645 kDPvRPgV~~AV~~Cq~AG---ItVRMVTGD-NI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlA 720 (1034)
T KOG0204|consen 645 KDPVRPGVPEAVQLCQRAG---ITVRMVTGD-NINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLA 720 (1034)
T ss_pred cCCCCCCcHHHHHHHHHcC---cEEEEEeCC-cHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeee
Confidence 3489999999999999999 999999974 21111222222 43 111111110 01110 0 0011111 01
Q ss_pred CCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc-CChhHHHHHHhhCCeeeecCc
Q 008499 454 VESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG-SSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 454 ~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~-~~~~L~~~~~~~gi~~~p~~~ 523 (563)
-.++.||.-.++.+++. +.-+-.-|||.||-|+|+.||||..+| +.... |++. -.++=+++
T Consensus 721 RSSP~DK~lLVk~L~~~-----g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV---AKEa-SDIIi~DD 782 (1034)
T KOG0204|consen 721 RSSPNDKHLLVKGLIKQ-----GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV---AKEA-SDIIILDD 782 (1034)
T ss_pred cCCCchHHHHHHHHHhc-----CcEEEEecCCCCCchhhhhcccchhccccchhh---hhhh-CCeEEEcC
Confidence 24578999888888852 233446799999999999999999998 44332 2333 35665554
No 161
>PTZ00174 phosphomannomutase; Provisional
Probab=95.34 E-value=0.021 Score=57.29 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=41.7
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcCc-cEEEc-CChhHHHHHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIG-SSSSLRRVGSQ 513 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-givi~-~~~~L~~~~~~ 513 (563)
..+.+|...++.+.+. ...++++|| |.||++||+.|.. |+.++ +.+.++.+|+-
T Consensus 184 ~~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~ 243 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKEL 243 (247)
T ss_pred eCCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHH
Confidence 3467899999999875 368999999 8999999997643 66665 45667766654
No 162
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=95.26 E-value=0.13 Score=49.04 Aligned_cols=109 Identities=18% Similarity=0.259 Sum_probs=65.0
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEcc--cc-ChHhhHHHHhCCCCcceEEeeccEecCccccCccc------ccCCC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSY--CW-CGDLIRASFSSGLNALNVHANEFSFKESISTGEII------EKVES 456 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~--gw-s~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~------~~~~~ 456 (563)
+.+.||..+.+..+++.| +.++|||. |. .+.|....+.. +.+ .+=+.|.-.+....+-+. ..+.+
T Consensus 30 ~~~~~g~i~al~~l~~~g---y~lVvvTNQsGi~rgyf~~~~f~~-~~~--~m~~~l~~~gv~id~i~~Cph~p~~~c~c 103 (181)
T COG0241 30 FQFIPGVIPALLKLQRAG---YKLVVVTNQSGIGRGYFTEADFDK-LHN--KMLKILASQGVKIDGILYCPHHPEDNCDC 103 (181)
T ss_pred hccCccHHHHHHHHHhCC---CeEEEEECCCCccccCccHHHHHH-HHH--HHHHHHHHcCCccceEEECCCCCCCCCcc
Confidence 578899999999999888 99999996 10 12222222221 000 000000000111111111 11334
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
.--|.-.+.+++++++.+ ..+.++|||..+|+.+...+++ |+.+
T Consensus 104 RKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~ 148 (181)
T COG0241 104 RKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLV 148 (181)
T ss_pred cCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEE
Confidence 445667888888888764 4789999999999999999998 4444
No 163
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.09 E-value=0.13 Score=51.19 Aligned_cols=87 Identities=16% Similarity=0.246 Sum_probs=54.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhH--HHHhC-CCCc---ceEEeeccEecCccccCcccccCCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIR--ASFSS-GLNA---LNVHANEFSFKESISTGEIIEKVESPI 458 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~--~~L~~-~l~~---~~I~aN~l~~~~g~~tG~~~~~~~~g~ 458 (563)
...+-||+.+++++++++| .++.|+|.+ +..... ..|++ |++. ..|+++..
T Consensus 22 ~~~~~pga~e~L~~L~~~G---~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~------------------- 78 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQG---KPVYFVSNS-PRNIFSLHKTLKSLGINADLPEMIISSGE------------------- 78 (242)
T ss_pred CCccCccHHHHHHHHHHCC---CEEEEEeCC-CCChHHHHHHHHHCCCCccccceEEccHH-------------------
Confidence 3567899999999999999 999999987 555544 45554 5532 12222210
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
.-...+....++.+. .+..++++||+..|+..+..+
T Consensus 79 ~~~~~l~~~~~~~~~-~~~~~~~vGd~~~d~~~~~~~ 114 (242)
T TIGR01459 79 IAVQMILESKKRFDI-RNGIIYLLGHLENDIINLMQC 114 (242)
T ss_pred HHHHHHHhhhhhccC-CCceEEEeCCcccchhhhcCC
Confidence 011244444433332 235799999999998777443
No 164
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.01 E-value=0.05 Score=60.51 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=66.0
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
+.=|.++..-+..++.++ ....|+++. |-++.....+..+ +++.|- .+ .+.+.-|++..|.++.+
T Consensus 710 v~sr~dah~eL~~lR~k~---~~aLvi~G~-Sl~~cl~yye~Ef--~el~~~--------~~-aVv~CRctPtQKA~v~~ 774 (1051)
T KOG0210|consen 710 VTSRGDAHNELNNLRRKT---DCALVIDGE-SLEFCLKYYEDEF--IELVCE--------LP-AVVCCRCTPTQKAQVVR 774 (1051)
T ss_pred cCCchHHHHHHHHhhcCC---CcEEEEcCc-hHHHHHHHHHHHH--HHHHHh--------cC-cEEEEecChhHHHHHHH
Confidence 455666777777777665 566677764 3333222222110 110000 00 11122367889999888
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC-hhHHHHHHhhCC
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS-SSLRRVGSQFGV 516 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~-~~L~~~~~~~gi 516 (563)
-+.+.. +.++-+||||-||..|+..||+||.|-++ .+=+..+..+.|
T Consensus 775 llq~~t----~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI 822 (1051)
T KOG0210|consen 775 LLQKKT----GKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSI 822 (1051)
T ss_pred HHHHhh----CceEEEEcCCCccchheeecccceeeecccccccchhccccH
Confidence 777653 35788999999999999999998888544 223333344544
No 165
>PF12981 DUF3865: Domain of Unknown Function with PDB structure (DUF3865); InterPro: IPR024477 This entry represents a family of proteins of unknown function. The Nostoc punctiforme protein (D0VWS1 from SWISSPROT) has been structurally characterised and adopts a heme oxygenase-like fold similar to that of the Chlamydia trachomatis death domain-binding CADD protein. The proposed active sites of the Nostoc and Chlamydia sequences are identical, suggesting similar functions.; PDB: 3B5P_A 3B5O_A.
Probab=94.87 E-value=0.24 Score=47.72 Aligned_cols=202 Identities=15% Similarity=0.121 Sum_probs=106.8
Q ss_pred HHHHHHHHhHHhHH-Hh-hcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Q 008499 16 LARRLWIKFKRESV-FA-MYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRKGVLE 93 (563)
Q Consensus 16 ~~~~lw~~~~~~~~-~~-~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~ 93 (563)
|+..+.+....+.. ++ .++||++.|..-++.. ...||.|=-.|-++-.-.+..|+.++...-.=-+..++..++.+
T Consensus 4 ~s~~~~~~l~~d~~~fs~nn~~~~~~i~t~S~~~--~~~vi~~ys~F~~~~~~~l~~A~~~~~~~~~~~V~~El~~Ni~E 81 (231)
T PF12981_consen 4 FSTQLNQWLTMDHYQFSINNNPFLSHISTASFSQ--KELVIKQYSVFPKYNCGMLQRAAYCIRGFCWPGVAQELQRNINE 81 (231)
T ss_dssp HHHHHHHHHHHH-GGG-TTT-CCHHGCCC--HHH--HHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhhhhhcCCHHHHHhhhhhHHH--HHHHHHHHhHhhHHHHHHHHHHHHHHhhcCCcHHHHHHHHhHHH
Confidence 44555444433333 33 5899999887665554 44444443336665555555565555332212245567778888
Q ss_pred HHH----------HHHHHHHH-hCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHH
Q 008499 94 ELK----------MHDSFVKE-WGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSP 162 (563)
Q Consensus 94 E~~----------~h~~~~~~-~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~p 162 (563)
|.. +++.-+.. +|.+.. ...|+++|.+..+=+.+...-+. -++++|++.
T Consensus 82 E~G~~~gk~sHy~~~~~~l~~~~~~~v~-~~~Ps~aT~~fl~sv~~L~t~~~-------------------s~vlGa~YA 141 (231)
T PF12981_consen 82 EMGEGCGKISHYVVFRKALHTYFGFDVN-NRMPSVATTHFLDSVLALFTWDS-------------------SEVLGACYA 141 (231)
T ss_dssp HTTTTTTT--HHHHHHHHHHHHHS---T-T----HHHHHHHHHHHHHCTS-H-------------------HHHHHHHHH
T ss_pred hcCCCCCCcchHHHHHHHHHHHhCCccc-ccCCcHHHHHHHHHHHHHhCCCH-------------------HHHHHHHHH
Confidence 876 56665554 887665 46799999999888888764322 255666665
Q ss_pred HH-------HHHHHHHHHHHhhccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Q 008499 163 CM-------RLYAFLGKEFHALLNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235 (563)
Q Consensus 163 C~-------~~Y~~ig~~~~~~~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~l 235 (563)
-+ -+-.+|..+++...+..-+...- ++.+.+-++-=.+..+.+.+.++.... +++++...++=|..++..
T Consensus 142 tE~~AIpEl~ll~ei~~~la~rk~~~~~~s~l-~F~d~HlDg~E~~H~d~L~~~l~~~i~--~e~q~~~f~~Gf~~mI~~ 218 (231)
T PF12981_consen 142 TEAAAIPELQLLYEIVNELAQRKGLHNSWSQL-DFYDWHLDGTEQEHKDGLRQFLASYID--TEEQMPLFKDGFLAMIDI 218 (231)
T ss_dssp HHHHHHHHHHHHHHHHTTT---HHHHH-------HHHHHCS----HHHHHHHHHHHTT----GGG-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCcchhhh-HHHHHhcchHHHHHHHHHHHHHHHHcC--cchhHHHHHHHHHHHHHH
Confidence 44 23334443333211000011111 344444455556788889999998753 344688899999999999
Q ss_pred HHHhhcc
Q 008499 236 EVEFFCA 242 (563)
Q Consensus 236 E~~Fw~~ 242 (563)
=..||.+
T Consensus 219 m~~wW~~ 225 (231)
T PF12981_consen 219 MEDWWKE 225 (231)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8899975
No 166
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.74 E-value=0.17 Score=52.69 Aligned_cols=106 Identities=11% Similarity=0.008 Sum_probs=71.7
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHH
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFN 465 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~ 465 (563)
+.||+.++++.++++| +.+.|+|.+ ....+..+|++ +.-+. ...+.. . ......|...++
T Consensus 32 ~~~~~~e~L~~L~~~G---i~lai~S~n-~~~~a~~~l~~~~~~~~~---~~~f~~---~--------~~~~~pk~~~i~ 93 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQG---FLLALASKN-DEDDAKKVFERRKDFILQ---AEDFDA---R--------SINWGPKSESLR 93 (320)
T ss_pred cHHHHHHHHHHHHhCC---CEEEEEcCC-CHHHHHHHHHhCccccCc---HHHeeE---E--------EEecCchHHHHH
Confidence 3789999999999999 999999999 57788888875 11000 000100 0 001125888899
Q ss_pred HHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHHH
Q 008499 466 NTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGS 512 (563)
Q Consensus 466 ~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~~ 512 (563)
+++++.+.+ .+.++||||+..|+.....+...+-+.. ...+.+...
T Consensus 94 ~~~~~l~i~-~~~~vfidD~~~d~~~~~~~lp~~~~~~~~~~~~~~l~ 140 (320)
T TIGR01686 94 KIAKKLNLG-TDSFLFIDDNPAERANVKITLPVKTLLCDPAELAAILL 140 (320)
T ss_pred HHHHHhCCC-cCcEEEECCCHHHHHHHHHHCCCCccCCChHHHHHHhc
Confidence 998888764 5789999999999999998765443332 234444443
No 167
>PF01126 Heme_oxygenase: Heme oxygenase; InterPro: IPR016053 Haem oxygenase (1.14.99.3 from EC) (HO) [] is the microsomal enzyme that, in animals, carries out the oxidation of haem, it cleaves the haem ring at the alpha-methene bridge to form biliverdin and carbon monoxide []. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. In mammals there are three isozymes of haem oxygenase: HO-1 to HO-3. The first two isozymes differ in their tissue expression and their inducibility: HO-1 is highly inducible by its substrate haem and by various non-haem substances, while HO-2 is non-inducible. It has been suggested [] that HO-2 could be implicated in the production of carbon monoxide in the brain where it is said to act as a neurotransmitter. In the genome of the chloroplast of red algae as well as in cyanobacteria, there is a haem oxygenase (gene pbsA) that is the key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae []. A haem oxygenase is also present in the bacteria Corynebacterium diphtheriae (gene hmuO), where it is involved in the acquisition of iron from the host haem []. There is, in the central section of these enzymes, a well-conserved region centred on a histidine residue.; GO: 0004392 heme oxygenase (decyclizing) activity, 0006788 heme oxidation, 0055114 oxidation-reduction process; PDB: 1J77_A 1P3U_A 1P3V_A 1P3T_A 1WNW_B 1WNX_B 1IW1_B 1WNV_C 1V8X_A 1WZG_B ....
Probab=94.59 E-value=2.4 Score=40.94 Aligned_cols=107 Identities=18% Similarity=0.176 Sum_probs=68.5
Q ss_pred chHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-----CCHHHHHHHHHHH
Q 008499 14 EGLARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECA-----DDDDAKLSISELR 88 (563)
Q Consensus 14 ~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a-----~~~~~~~~l~~~~ 88 (563)
|+|+++|-......-...-+++|++.+.+|.++.+.+..+|.+=|.+....-..+....+.. ..+ ......
T Consensus 1 ~~l~~~Lr~~T~~~H~~~e~~~~~~~l~~~~~~~~~Y~~~L~~~~~~y~~lE~~l~~~~~~~~~~~~~~~-~l~R~~--- 76 (205)
T PF01126_consen 1 MSLSQRLREATRDLHERLEKSPFMKDLFAGDLSRDDYARFLQAFYHVYRALEAALDRNRDDPALAPLYFP-ELRRSA--- 76 (205)
T ss_dssp -SHHHHHHHHTHHHHHHHHTSHHHHHHHTTSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTTGGGS-G-HHHTHH---
T ss_pred CcHHHHHHHHHHHHHHHHHcchhHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccccCc-chhHHH---
Confidence 57888888776555555568999999999999999999999999988887776665542221 111 111111
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhc
Q 008499 89 KGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATAS 131 (563)
Q Consensus 89 ~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~ 131 (563)
.+..-+.. -.|-+..+..++.|++..|..++...+.
T Consensus 77 -~L~~DL~~------l~~~~~~~~~~~~~a~~~~~~~i~~~~~ 112 (205)
T PF01126_consen 77 -ALEADLAA------LGGPDWRDDIEPSPATQAYVPHIRELAE 112 (205)
T ss_dssp -HHHHHHHH------HHCTTHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHH------hhCCCcccccCCChhHHHHHHHHHHHHc
Confidence 11111211 1121222335678999999999988874
No 168
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=94.30 E-value=0.29 Score=54.41 Aligned_cols=115 Identities=12% Similarity=0.084 Sum_probs=70.2
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccCh------------HhhHHHHhC-CCCcceEEeeccEecCccccCcccccC
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCG------------DLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKV 454 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~------------~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~ 454 (563)
+.||+.+.|+.|+++| +.++|+|.- +. ..+..+|+. |++..-++|-. + .
T Consensus 198 l~pgV~e~L~~L~~~G---y~IvIvTNQ-~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~----~----------~ 259 (526)
T TIGR01663 198 IFPEIPEKLKELEADG---FKICIFTNQ-GGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIG----A----------G 259 (526)
T ss_pred cccCHHHHHHHHHHCC---CEEEEEECC-cccccCcccHHHHHHHHHHHHHHcCCceEEEEeCC----C----------C
Confidence 5689999999999999 999999973 22 235666665 55422222221 0 0
Q ss_pred CCCCCcHHHHHHHHHHhC----CCCCccEEEEcCCcCchHHhhhcCccEEEcC-ChhHHHHHHhhCCeeeecCc
Q 008499 455 ESPIDKVQAFNNTLEKYG----TDRKNLSVYIGDSVGDLLCLLEADIGIVIGS-SSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~----~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~-~~~L~~~~~~~gi~~~p~~~ 523 (563)
.+.--+...+..++..++ . ...+++||||+.+|+.+...|+. --.+ +.+=+.+|..-||+|..-++
T Consensus 260 ~~RKP~pGm~~~a~~~~~~~~~I-d~~~S~~VGDaagr~~~g~~ag~--~~~D~s~~D~~FA~n~gi~F~tPee 330 (526)
T TIGR01663 260 FYRKPLTGMWDHLKEEANDGTEI-QEDDCFFVGDAAGRPANGKAAGK--KKKDFSCADRLFAANLGIPFATPEE 330 (526)
T ss_pred CCCCCCHHHHHHHHHhcCcccCC-CHHHeEEeCCcccchHHHHhcCC--CcCCCChhhHHHHHHcCCcccChHH
Confidence 111123345566665543 2 24689999999999988776652 0001 12335577788888875443
No 169
>PLN02423 phosphomannomutase
Probab=94.24 E-value=0.067 Score=53.60 Aligned_cols=53 Identities=15% Similarity=0.093 Sum_probs=43.0
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcCc-cEEEcCChhHHHHHHh
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSSSSLRRVGSQ 513 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-givi~~~~~L~~~~~~ 513 (563)
..|.+|...|+.++ ..+.++++|| +.||++||+..++ |+.+.+..-+...|.+
T Consensus 185 ~~gvnKg~al~~L~------~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~~~~~~ 242 (245)
T PLN02423 185 PQGWDKTYCLQFLE------DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTREQCTA 242 (245)
T ss_pred eCCCCHHHHHHHhc------CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHHHHHHH
Confidence 45778999999998 1478999999 8999999998666 8888766666767654
No 170
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=94.14 E-value=0.24 Score=48.77 Aligned_cols=113 Identities=15% Similarity=0.177 Sum_probs=68.3
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh-hHHHHh---C-CCCcceEEeeccEecCccccCcccccCCCCCC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL-IRASFS---S-GLNALNVHANEFSFKESISTGEIIEKVESPID 459 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~-I~~~L~---~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~ 459 (563)
....-||+.||++...++| ..++-||.- ..+- ....+. + |++.+. =-.+.+ . .....
T Consensus 120 ~sk~vpGA~eFl~Yvn~~G---g~ifyiSNR-~~~~~~~~T~~nLk~~g~~~~~--~~~~ll----------k--k~~k~ 181 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNG---GKIFYISNR-DQENEKDGTIENLKSEGLPQVL--ESHLLL----------K--KDKKS 181 (274)
T ss_pred ccccCccHHHHHHHHHhcC---cEEEEEecc-chhcccchhHHHHHHcCccccc--ccceEE----------e--eCCCc
Confidence 3466799999999999999 899999963 2322 222222 1 443210 000111 1 12234
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCChhHHHHHHhhCCeeeecC
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSSSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~~L~~~~~~~gi~~~p~~ 522 (563)
|..+.+...+. ...|.+|||...|+.-....+-- --...-+.+..+.||-.|+-+.
T Consensus 182 Ke~R~~~v~k~-----~~iVm~vGDNl~DF~d~~~k~~~--~eR~Alv~~~~~~FGk~~Ii~p 237 (274)
T COG2503 182 KEVRRQAVEKD-----YKIVMLVGDNLDDFGDNAYKKAE--AERRALVKQNQKKFGKKFIILP 237 (274)
T ss_pred HHHHHHHHhhc-----cceeeEecCchhhhcchhhhhhh--HHHHHHHHHHHHHhCceEEEec
Confidence 66676666553 34677999999999766665511 0012357888899998888665
No 171
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=94.08 E-value=1.8 Score=42.63 Aligned_cols=105 Identities=11% Similarity=0.080 Sum_probs=63.8
Q ss_pred hccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-C-C-Cc-ceEEe-eccEecCccccCcccccCCCC
Q 008499 383 GERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-G-L-NA-LNVHA-NEFSFKESISTGEIIEKVESP 457 (563)
Q Consensus 383 ~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~-l-~~-~~I~a-N~l~~~~g~~tG~~~~~~~~g 457 (563)
.....+-||+.++++.|+.+| +|+.++|.. +..-++..++. + + .. -++++ ..-++. .|
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~g---ip~alat~s-~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~-------------~g 150 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNG---IPVALATSS-TSASFELKISRHEDIFKNFSHVVLGDDPEVK-------------NG 150 (222)
T ss_pred ccccccCCcHHHHHHHHHhCC---CCeeEEecC-CcccHHHHHHHhhHHHHhcCCCeecCCcccc-------------CC
Confidence 346789999999999999999 999999986 34444444443 1 1 10 01111 111111 11
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
-.....+-.-.+..+....++++.+.||.+=+.+.+.|+--+++-++
T Consensus 151 KP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 151 KPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 11212222222333332237899999999999999999986666545
No 172
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=93.38 E-value=0.25 Score=49.01 Aligned_cols=89 Identities=12% Similarity=0.118 Sum_probs=51.4
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHh---C-CCCcceEEeeccEecCccccCcccccCCCCCCcHH
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFS---S-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQ 462 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~---~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~ 462 (563)
+.-||+.+|++.++++| +.|++||+= ........++ . |+... +.+.+... +.. .+.....-|..
T Consensus 115 ~aip~a~~l~~~~~~~G---~~V~~iT~R-~~~~r~~T~~nL~~~G~~~~----~~l~lr~~---~~~-~~~~~~~yK~~ 182 (229)
T PF03767_consen 115 PAIPGALELYNYARSRG---VKVFFITGR-PESQREATEKNLKKAGFPGW----DHLILRPD---KDP-SKKSAVEYKSE 182 (229)
T ss_dssp EEETTHHHHHHHHHHTT---EEEEEEEEE-ETTCHHHHHHHHHHHTTSTB----SCGEEEEE---SST-SS------SHH
T ss_pred cccHHHHHHHHHHHHCC---CeEEEEecC-CchhHHHHHHHHHHcCCCcc----chhccccc---ccc-ccccccccchH
Confidence 66788999999999999 999999984 2333333332 2 54321 11211110 000 01112334888
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHH
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLC 491 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~ 491 (563)
..+.+.++ .+..+.+|||..+|+.-
T Consensus 183 ~r~~i~~~----Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 183 RRKEIEKK----GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp HHHHHHHT----TEEEEEEEESSGGGCHC
T ss_pred HHHHHHHc----CCcEEEEeCCCHHHhhc
Confidence 87877763 12345589999999987
No 173
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.36 E-value=0.91 Score=44.98 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=51.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHh---hHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDL---IRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~---I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K 460 (563)
..+.-||..+|++.++++| +.++++|+= +... ...-|.. |+++. ..|...+. +. ..+ ....-|
T Consensus 118 ~apaip~al~l~~~l~~~G---~~Vf~lTGR-~e~~r~~T~~nL~~~G~~~~----~~LiLR~~---~d-~~~-~~~~yK 184 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELG---IKIFLLSGR-WEELRNATLDNLINAGFTGW----KHLILRGL---ED-SNK-TVVTYK 184 (229)
T ss_pred CCCCCHHHHHHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHHHHHcCCCCc----CeeeecCC---CC-CCc-hHhHHH
Confidence 4578899999999999999 999999985 2222 3333433 55431 12222110 00 000 011127
Q ss_pred HHHHHHHHHHhCCCCCccEE-EEcCCcCchH
Q 008499 461 VQAFNNTLEKYGTDRKNLSV-YIGDSVGDLL 490 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~vi-yiGDs~~Dl~ 490 (563)
....+++.++ +.+|+ .|||-.+||.
T Consensus 185 s~~R~~l~~~-----GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 185 SEVRKSLMEE-----GYRIWGNIGDQWSDLL 210 (229)
T ss_pred HHHHHHHHhC-----CceEEEEECCChHHhc
Confidence 6676676652 34555 7999999994
No 174
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=93.14 E-value=0.038 Score=51.74 Aligned_cols=38 Identities=8% Similarity=0.108 Sum_probs=33.5
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 427 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~ 427 (563)
.+..|||+.+|++.+.++ .+++|.|++ +..+.+.++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~----yei~I~Ts~-~~~yA~~il~~ 77 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW----YELVIFTAS-LEEYADPVLDI 77 (162)
T ss_pred EEEECCCHHHHHHHHHhc----CEEEEEcCC-cHHHHHHHHHH
Confidence 468999999999999864 799999999 78899988876
No 175
>PLN02580 trehalose-phosphatase
Probab=92.85 E-value=0.29 Score=52.10 Aligned_cols=47 Identities=26% Similarity=0.304 Sum_probs=37.4
Q ss_pred CCCCcHHHHHHHHHHhCCCCCcc--EEEEcCCcCchHHhhh-----cCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNL--SVYIGDSVGDLLCLLE-----ADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~--viyiGDs~~Dl~~l~~-----Ad~givi~ 502 (563)
.+.+|...++.+++..+....+. .+|+||+.||..|+.. +++||.++
T Consensus 298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg 351 (384)
T PLN02580 298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS 351 (384)
T ss_pred CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe
Confidence 36799999999998876532222 4899999999999996 47788886
No 176
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.65 E-value=0.15 Score=50.97 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=33.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA 495 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A 495 (563)
.+.+|...++.+++..+.. ...++|+||+.||..|+..+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~ 202 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVV 202 (244)
T ss_pred CCCCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHH
Confidence 4678999999999887653 46899999999999999998
No 177
>COG5398 Heme oxygenase [Inorganic ion transport and metabolism]
Probab=92.44 E-value=10 Score=36.75 Aligned_cols=190 Identities=18% Similarity=0.231 Sum_probs=102.7
Q ss_pred HHHHHHHhHHhHHHhhcCHHHHHhhcCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHH
Q 008499 17 ARRLWIKFKRESVFAMYSPFTVCLASGNLKLETFRHYIAQDFHFLKAFSQAYELAEECADDDDAKLSISELRK-GVLEEL 95 (563)
Q Consensus 17 ~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~~~f~~Yl~QD~~yl~~f~r~~~~~~~~a~~~~~~~~l~~~~~-~i~~E~ 95 (563)
+..|....+.....+-+.-|+..+-.|-++.+.|+..+.|=+.+..++-++...-. +++ . +..+.- .+.+--
T Consensus 4 a~~lR~gt~~ah~~aEnv~fmkcfLkg~V~~e~f~kl~~n~yf~ysaleaa~~~~~---d~~-~---l~~i~fp~lnr~~ 76 (238)
T COG5398 4 AFKLRQGTQKAHTVAENVGFMKCFLKGVVERESFRKLLANLYFVYSALEAATQIHK---DNP-I---LSSIYFPELNRKA 76 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHhc---cCc-h---hhhccchhhhhHH
Confidence 34444433322223334569999999999999999999999988887776544322 221 1 111100 011111
Q ss_pred HHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHhcCCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHHHH------H
Q 008499 96 KMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATASGKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRLYA------F 169 (563)
Q Consensus 96 ~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a~~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~Y~------~ 169 (563)
.+-+.+...+|-+..+.+.++|++.+|++++...+.... +.| +.-|+.-|. .
T Consensus 77 tle~dl~~yyg~nwre~I~~sp~t~~yv~rv~~iaa~ap--------------------~lL--Iah~ytRyLGdlsggq 134 (238)
T COG5398 77 TLEKDLLYYYGNNWRENIQPSPATIAYVDRVRYIAATAP--------------------ELL--IAHNYTRYLGDLSGGQ 134 (238)
T ss_pred HhhcCHHHHhcccHHHhcCcChhHHHHHHHHHHHHhcCc--------------------chh--HHHHHHHHHhcCCCcH
Confidence 233334445564445678899999999999999885321 111 223433331 1
Q ss_pred HHHHHHhh-ccCCCCcccccccccccCChhHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHhh
Q 008499 170 LGKEFHAL-LNANEGNHPYTKWIDNYSSESFQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKLEVEFF 240 (563)
Q Consensus 170 ig~~~~~~-~~~~~~~~~y~~Wi~~y~s~~f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~lE~~Fw 240 (563)
+-+.++.. ......+..+.++=+. ++=..+-...++.+|++ .+++++..++.+.-.-+-.+-.+.+
T Consensus 135 ~l~ki~q~~~~L~~~gtaFy~F~dl---~dek~fK~~YR~~ld~l--~ldeAt~~rIvdeAn~aF~~N~~~~ 201 (238)
T COG5398 135 ILKKIAQSALELSEGGTAFYEFEDL---GDEKAFKDEYRQNLDSL--ELDEATKLRIVDEANDAFDFNMQMF 201 (238)
T ss_pred HHHHHHHHHhccccccceeeeHhhc---chhhhHHHHHHHHhhcc--cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333321 1111122233333332 24455666788888865 4788887777665444444333333
No 178
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=91.78 E-value=0.12 Score=61.83 Aligned_cols=45 Identities=24% Similarity=0.406 Sum_probs=35.1
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCCh
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSSS 505 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~~ 505 (563)
+..|..+.+-.++. .+..+.+||||.||..|++.|||||.|+...
T Consensus 779 PlQKA~Vv~lVk~~----~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~E 823 (1151)
T KOG0206|consen 779 PLQKALVVKLVKKG----LKAVTLAIGDGANDVSMIQEAHVGVGISGQE 823 (1151)
T ss_pred HHHHHHHHHHHHhc----CCceEEEeeCCCccchheeeCCcCeeeccch
Confidence 35677777666432 2467899999999999999999999997553
No 179
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=91.11 E-value=0.96 Score=42.57 Aligned_cols=85 Identities=19% Similarity=0.275 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEccccChHhhH---HHHhCCCCcceEEe--eccEecCccccCcccccCCCCCCcHHHHHHH
Q 008499 393 TTFFQKVVKNENLNANVHVLSYCWCGDLIR---ASFSSGLNALNVHA--NEFSFKESISTGEIIEKVESPIDKVQAFNNT 467 (563)
Q Consensus 393 ~efl~~l~~~g~~~~~v~IvS~gws~~~I~---~~L~~~l~~~~I~a--N~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~ 467 (563)
..++..++++| ..++.|++- +.-=++ ..|+.. .+| . |.+.| +|. ++-....+|...+++
T Consensus 120 ~qLI~MHq~RG---D~i~FvTGR-t~gk~d~vsk~Lak~---F~i-~~m~pv~f-----~Gd--k~k~~qy~Kt~~i~~- 183 (237)
T COG3700 120 RQLIDMHQRRG---DAIYFVTGR-TPGKTDTVSKTLAKN---FHI-TNMNPVIF-----AGD--KPKPGQYTKTQWIQD- 183 (237)
T ss_pred HHHHHHHHhcC---CeEEEEecC-CCCcccccchhHHhh---ccc-CCCcceee-----ccC--CCCcccccccHHHHh-
Confidence 56889999999 889999874 322222 223221 122 1 22233 332 111234567766543
Q ss_pred HHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEE
Q 008499 468 LEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVI 501 (563)
Q Consensus 468 ~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi 501 (563)
...-|.+|||.+|+.+.+.|++ ||-+
T Consensus 184 --------~~~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 184 --------KNIRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred --------cCceEEecCCchhhhHHHhcCccceeE
Confidence 2346899999999999999997 6554
No 180
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=90.93 E-value=7.5 Score=38.07 Aligned_cols=112 Identities=12% Similarity=0.191 Sum_probs=69.3
Q ss_pred CHHHHHHHhc------cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeeccEecCcc
Q 008499 375 NLEDIKKAGE------RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANEFSFKESI 445 (563)
Q Consensus 375 ~~~~i~~~~~------~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~l~~~~g~ 445 (563)
+.++..+++. .+..++-..+++-.+++++ ..+++.+. ..-...+|+. |+.. ..|+|-+
T Consensus 82 d~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~-----k~~FTNa~-k~HA~r~Lk~LGieDcFegii~~e------- 148 (244)
T KOG3109|consen 82 DADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR-----KWIFTNAY-KVHAIRILKKLGIEDCFEGIICFE------- 148 (244)
T ss_pred CHHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc-----EEEecCCc-HHHHHHHHHHhChHHhccceeEee-------
Confidence 4566666654 3444555688888888643 67888774 3333334555 6532 2233322
Q ss_pred ccCcccccCCCCCCcH--HHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 446 STGEIIEKVESPIDKV--QAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 446 ~tG~~~~~~~~g~~K~--~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
...+.-.+-.||. .+++...+..+.+++.+++++-||.+-+...+..|. +++++
T Consensus 149 ---~~np~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~ 205 (244)
T KOG3109|consen 149 ---TLNPIEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVG 205 (244)
T ss_pred ---ccCCCCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEE
Confidence 1111111223453 567777777778778999999999999999999998 45555
No 181
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=90.91 E-value=0.6 Score=37.44 Aligned_cols=42 Identities=26% Similarity=0.384 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc-cEEEcC
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVIGS 503 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-givi~~ 503 (563)
...+...++..+.+ ..++++|||+ .+|+.+...+++ +|.+..
T Consensus 7 p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~t 50 (75)
T PF13242_consen 7 PGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLT 50 (75)
T ss_dssp HHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESS
T ss_pred HHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECC
Confidence 34566666666553 5789999999 999999999999 666653
No 182
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=89.47 E-value=0.31 Score=56.68 Aligned_cols=47 Identities=21% Similarity=0.257 Sum_probs=38.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhc---CccEEEcCCh
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEA---DIGIVIGSSS 505 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~A---d~givi~~~~ 505 (563)
.+.+|...++.+++.. ..+.++++||+.||+.|+..+ +++|.+|.++
T Consensus 654 ~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 654 AGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPGE 703 (726)
T ss_pred CCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCCC
Confidence 4568999999998732 246899999999999999986 5688888654
No 183
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=89.20 E-value=0.37 Score=46.90 Aligned_cols=44 Identities=27% Similarity=0.219 Sum_probs=31.6
Q ss_pred CcHHHHHHHHHHhCCCCCcc-EEEEcCCcCchHHhhhcCccEEEc
Q 008499 459 DKVQAFNNTLEKYGTDRKNL-SVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~-viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
+|.++.+-++..+..-.+.+ ++.+|||.||++|+...|..++++
T Consensus 191 gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~d~AfiV~ 235 (274)
T COG3769 191 GKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVMDYAFIVK 235 (274)
T ss_pred CccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhhhhheeec
Confidence 36555555554432222344 788999999999999999988886
No 184
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=86.20 E-value=0.42 Score=54.71 Aligned_cols=28 Identities=39% Similarity=0.635 Sum_probs=23.7
Q ss_pred cEEEEcCCcCchHHhhhcCccEEEc-CCh
Q 008499 478 LSVYIGDSVGDLLCLLEADIGIVIG-SSS 505 (563)
Q Consensus 478 ~viyiGDs~~Dl~~l~~Ad~givi~-~~~ 505 (563)
-|-..|||+||-|+|+.|||||++| +.+
T Consensus 707 iVaVTGDGVNDsPALKKADIGVAMGiaGS 735 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKADIGVAMGIAGS 735 (1019)
T ss_pred EEEEeCCCcCCChhhcccccceeeccccc
Confidence 3446899999999999999999997 443
No 185
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=85.70 E-value=4.8 Score=37.97 Aligned_cols=108 Identities=15% Similarity=0.093 Sum_probs=61.6
Q ss_pred HHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCC--cceEEeeccEecCccccCcccccCCCC
Q 008499 381 KAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLN--ALNVHANEFSFKESISTGEIIEKVESP 457 (563)
Q Consensus 381 ~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~--~~~I~aN~l~~~~g~~tG~~~~~~~~g 457 (563)
+.++.+.|.|+..+.|+.|+.+| +.+.+-|-.+..+.-+.+|+. ++. ........ ..|...-...
T Consensus 39 ~~g~~v~lypdv~~iL~~L~~~g---v~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~---------~~F~~~eI~~ 106 (169)
T PF12689_consen 39 SRGEEVSLYPDVPEILQELKERG---VKLAVASRTDEPDWARELLKLLEIDDADGDGVPLI---------EYFDYLEIYP 106 (169)
T ss_dssp TT--EE---TTHHHHHHHHHHCT-----EEEEE--S-HHHHHHHHHHTT-C-------------------CCECEEEESS
T ss_pred CCCCEEEeCcCHHHHHHHHHHCC---CEEEEEECCCChHHHHHHHHhcCCCccccccccch---------hhcchhheec
Confidence 45678999999999999999999 999999976677888888876 443 00011110 0111111122
Q ss_pred CCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEE
Q 008499 458 IDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVI 501 (563)
Q Consensus 458 ~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi 501 (563)
.+|...++++.++.+. .+..++++=|-..-......-||-.+.
T Consensus 107 gsK~~Hf~~i~~~tgI-~y~eMlFFDDe~~N~~~v~~lGV~~v~ 149 (169)
T PF12689_consen 107 GSKTTHFRRIHRKTGI-PYEEMLFFDDESRNIEVVSKLGVTCVL 149 (169)
T ss_dssp S-HHHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-EEEE
T ss_pred CchHHHHHHHHHhcCC-ChhHEEEecCchhcceeeEecCcEEEE
Confidence 3799999999988877 467899999998877777765553333
No 186
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=85.23 E-value=8.9 Score=38.97 Aligned_cols=28 Identities=14% Similarity=0.008 Sum_probs=24.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~g 415 (563)
..+.-||+.+|++.++++| +.+++||+=
T Consensus 143 ~ApAlp~al~ly~~l~~~G---~kIf~VSgR 170 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLG---FKIIFLSGR 170 (275)
T ss_pred cCCCChHHHHHHHHHHHCC---CEEEEEeCC
Confidence 3466679999999999999 999999984
No 187
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=85.20 E-value=1.7 Score=44.59 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=40.3
Q ss_pred cCCCC-chHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeec
Q 008499 385 RLSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANE 438 (563)
Q Consensus 385 ~i~lr-pG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~ 438 (563)
++++| ||..++++.|+++| +++.|+|.| +.+.+...|+. |+.. ..|+||.
T Consensus 143 ~v~irdPgV~EaL~~LkekG---ikLaIaTS~-~Re~v~~~L~~lGLd~YFdvIIs~G 196 (301)
T TIGR01684 143 PVRIRDPRIYDSLTELKKRG---CILVLWSYG-DRDHVVESMRKVKLDRYFDIIISGG 196 (301)
T ss_pred ccccCCHHHHHHHHHHHHCC---CEEEEEECC-CHHHHHHHHHHcCCCcccCEEEECC
Confidence 36688 99999999999999 999999988 68888888887 7753 2455554
No 188
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=84.70 E-value=0.8 Score=53.32 Aligned_cols=42 Identities=26% Similarity=0.318 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~ 502 (563)
++..|.+.+.++.+ .++.+=+.|||.||-.+|+.||+||-+.
T Consensus 837 sP~qK~~Lie~lQk-----l~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 837 SPDQKAELIEALQK-----LGYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred CchhHHHHHHHHHh-----cCcEEEecCCCcchhhhhhhcccCcchh
Confidence 45678777777765 2467789999999999999999999886
No 189
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=84.45 E-value=7.6 Score=36.41 Aligned_cols=90 Identities=16% Similarity=0.218 Sum_probs=59.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHH
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAF 464 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l 464 (563)
-...|...+.+..+++.| +.++|||.| +..-+..+..+ +++.+ +..++ +. ...+
T Consensus 45 ~~~tpe~~~W~~e~k~~g---i~v~vvSNn-~e~RV~~~~~~l~v~fi--------~~A~K-------P~------~~~f 99 (175)
T COG2179 45 PDATPELRAWLAELKEAG---IKVVVVSNN-KESRVARAAEKLGVPFI--------YRAKK-------PF------GRAF 99 (175)
T ss_pred CCCCHHHHHHHHHHHhcC---CEEEEEeCC-CHHHHHhhhhhcCCcee--------ecccC-------cc------HHHH
Confidence 456777888888888888 999999987 66666665544 44211 11111 11 1345
Q ss_pred HHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEE
Q 008499 465 NNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 501 (563)
Q Consensus 465 ~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi 501 (563)
++-+++.+.+ ..+++.|||.. ||+..-..+++ -|.+
T Consensus 100 r~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~tIlV 137 (175)
T COG2179 100 RRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMRTILV 137 (175)
T ss_pred HHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcEEEEE
Confidence 5556666653 57899999995 89888888887 3444
No 190
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=84.33 E-value=3.4 Score=41.03 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCcc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADIG 498 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~g 498 (563)
...++..+++.+.....++++|||+ .+|+.+...+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 4566666666553334579999999 6999999999984
No 191
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=84.24 E-value=4.4 Score=42.64 Aligned_cols=110 Identities=22% Similarity=0.237 Sum_probs=65.9
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--C-------CC--cceEEee--ccEe-cCcc-----
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--G-------LN--ALNVHAN--EFSF-KESI----- 445 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~-------l~--~~~I~aN--~l~~-~~g~----- 445 (563)
-+...||+.++++.++++| .++.|+|.+ ..++++.++.. + +. ...|++. ...| .++.
T Consensus 182 yv~~~pgl~elL~~Lr~~G---~klfLvTNS-~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v 257 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHG---KKLFLLTNS-DYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQV 257 (343)
T ss_pred HhccchhHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEE
Confidence 4677999999999999999 999999998 57777777665 3 11 1233332 2222 2111
Q ss_pred --ccCccc---------ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhh-hcCc-cEEEcC
Q 008499 446 --STGEII---------EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLL-EADI-GIVIGS 503 (563)
Q Consensus 446 --~tG~~~---------~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~-~Ad~-givi~~ 503 (563)
.+|... +.+-+ .+-...+.+.+. . .+.+++||||.. +|+.... .++. .+.|.+
T Consensus 258 ~~~~g~~~~~~~~~l~~g~vY~-gGn~~~~~~~l~---~-~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 258 DVETGSLKWGEVDGLEPGKVYS-GGSLKQFHELLK---W-RGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred eCCCCcccCCccccccCCCeEe-CCCHHHHHHHHC---C-CCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 122211 11111 123344555543 2 247899999974 7888777 6776 455543
No 192
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=83.74 E-value=0.97 Score=51.70 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=31.2
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
.|..++..+.+ .++.+...|||.||..+|++|+|||++-++
T Consensus 794 QKE~ii~tlK~-----~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 794 QKEFIITTLKK-----LGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hHHHHHHHHHh-----cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 44444444443 257799999999999999999999998644
No 193
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=83.41 E-value=2.2 Score=43.81 Aligned_cols=50 Identities=8% Similarity=0.054 Sum_probs=40.4
Q ss_pred cCCCC-chHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCc--ceEEeec
Q 008499 385 RLSLQ-DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNA--LNVHANE 438 (563)
Q Consensus 385 ~i~lr-pG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~--~~I~aN~ 438 (563)
.+++| ||+.++++.|+++| +++.|+|.| +.+.+...|+. |+.. ..|+|+.
T Consensus 145 ~v~irdp~V~EtL~eLkekG---ikLaIvTNg-~Re~v~~~Le~lgL~~yFDvII~~g 198 (303)
T PHA03398 145 PVRIRDPFVYDSLDELKERG---CVLVLWSYG-NREHVVHSLKETKLEGYFDIIICGG 198 (303)
T ss_pred ccccCChhHHHHHHHHHHCC---CEEEEEcCC-ChHHHHHHHHHcCCCccccEEEECC
Confidence 46788 99999999999999 999999988 68888888887 7643 2455554
No 194
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=82.22 E-value=1.2 Score=52.46 Aligned_cols=40 Identities=18% Similarity=0.117 Sum_probs=31.8
Q ss_pred CCCCcHHHHHHHHHH---hCCCCCccEEEEcCCcCchHHhhhcC
Q 008499 456 SPIDKVQAFNNTLEK---YGTDRKNLSVYIGDSVGDLLCLLEAD 496 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~---~~~~~~~~viyiGDs~~Dl~~l~~Ad 496 (563)
.+.+|..+++.+++. .+. ..+.++++||+.||..|+..++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~-~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGM-LPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCC-CcccEEEEcCCccHHHHHHHhh
Confidence 467899999998753 232 2467999999999999999875
No 195
>PTZ00445 p36-lilke protein; Provisional
Probab=79.93 E-value=9.9 Score=37.18 Aligned_cols=108 Identities=11% Similarity=0.219 Sum_probs=69.0
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccccChH----------------hhHHHHhC-C--CCcceEEeeccE-ecCc-c
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYCWCGD----------------LIRASFSS-G--LNALNVHANEFS-FKES-I 445 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~----------------~I~~~L~~-~--l~~~~I~aN~l~-~~~g-~ 445 (563)
.++|.|..++..+++.| ++++||+-+ +. +|+..|+. + .....|+|=-.. +++. .
T Consensus 75 ~~tpefk~~~~~l~~~~---I~v~VVTfS--d~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~ 149 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSN---IKISVVTFS--DKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSD 149 (219)
T ss_pred cCCHHHHHHHHHHHHCC---CeEEEEEcc--chhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhh
Confidence 36788888999999888 999998753 33 66677664 2 112233332222 1211 1
Q ss_pred ccC-cccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEc
Q 008499 446 STG-EIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 446 ~tG-~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~ 502 (563)
+.. .+.+ .....|.-.|++++++.+.. +..+++|=|+..-+..+...|+ ++.+.
T Consensus 150 y~~~gl~K--Pdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 150 YRPLGLDA--PMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVT 205 (219)
T ss_pred hhhhcccC--CCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcC
Confidence 110 0111 12234556679999988874 5899999999999999999998 66664
No 196
>PLN02645 phosphoglycolate phosphatase
Probab=79.43 E-value=5.8 Score=41.15 Aligned_cols=84 Identities=20% Similarity=0.110 Sum_probs=48.4
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHH---hC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHH
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASF---SS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQA 463 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L---~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~ 463 (563)
+-||..++++.++++| .+++++|.+ +..-...++ +. |++. .. +.+++. ...
T Consensus 45 ~~~ga~e~l~~lr~~g---~~~~~~TN~-~~~~~~~~~~~l~~lGi~~--------~~-~~I~ts------------~~~ 99 (311)
T PLN02645 45 LIEGVPETLDMLRSMG---KKLVFVTNN-STKSRAQYGKKFESLGLNV--------TE-EEIFSS------------SFA 99 (311)
T ss_pred cCcCHHHHHHHHHHCC---CEEEEEeCC-CCCCHHHHHHHHHHCCCCC--------Ch-hhEeeh------------HHH
Confidence 4599999999999999 999999987 433333333 32 4310 00 111111 012
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCc
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADI 497 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~ 497 (563)
+..+++..+.. ....+|++++.+|...+..+++
T Consensus 100 ~~~~l~~~~~~-~~~~V~viG~~~~~~~l~~~Gi 132 (311)
T PLN02645 100 AAAYLKSINFP-KDKKVYVIGEEGILEELELAGF 132 (311)
T ss_pred HHHHHHhhccC-CCCEEEEEcCHHHHHHHHHCCC
Confidence 33333332211 1235788888888888887765
No 197
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=78.63 E-value=10 Score=41.82 Aligned_cols=124 Identities=13% Similarity=0.013 Sum_probs=78.0
Q ss_pred hhccCCCCHHHHHHHhccCC----CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecC
Q 008499 368 SGVLKGINLEDIKKAGERLS----LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKE 443 (563)
Q Consensus 368 ~~~f~Gi~~~~i~~~~~~i~----lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~ 443 (563)
.-.|.|+..++++ .++.+. +.+=-.|-++-.+.-+ ..++||.. -.-+++..|+.-++.+.|+..|++...
T Consensus 108 ~v~f~Gl~~~~~~-v~ravLPkf~~~dv~~e~~~v~~~~~----~~~vv~~~-PrvMve~Flkeyl~~d~V~g~El~~~~ 181 (525)
T PLN02588 108 MLSFFGVKKESFR-AGKAVLPKYFLEDVGLEMFQVLKRGG----KRVGVSDL-PQVMIDVFLRDYLEIEVVVGRDMKMVG 181 (525)
T ss_pred HHhhcCCcHHHhh-hHHhhccHHHHhhcCHHHHHHHhhcC----cEEEEecC-CHHHHHHHHHHhcCcceEeeeeEEEee
Confidence 4567899888776 544221 1111133333333323 56677775 588888888875666789999999888
Q ss_pred ccccCcccccCCCCCCcHHHHHH-HHHHhCCCCCccEEEEcCC---cCchHHhhhcCccEEEcC
Q 008499 444 SISTGEIIEKVESPIDKVQAFNN-TLEKYGTDRKNLSVYIGDS---VGDLLCLLEADIGIVIGS 503 (563)
Q Consensus 444 g~~tG~~~~~~~~g~~K~~~l~~-~~~~~~~~~~~~viyiGDs---~~Dl~~l~~Ad~givi~~ 503 (563)
|.+||-+. +.+|.....+ +..+. .......+-+||+ .+|...+..+-.+.++.+
T Consensus 182 g~~tG~~~-----~~~~~~~~~~~~~~~~-~~~~~~~vG~~~~~~~~~~~~f~~~CkE~y~v~~ 239 (525)
T PLN02588 182 GYYLGIME-----DKKKHELAFDKVVQEE-RLNSGRLIGITSFNSPSHRSLFSQFCQEIYFVRN 239 (525)
T ss_pred eEEEEEEc-----ccchHHHHHHHHhccc-CcccccceeecccCcccccchhHHhCcceEEeCh
Confidence 88888654 4456655444 33211 1112458899998 788888877776777753
No 198
>PLN03017 trehalose-phosphatase
Probab=73.05 E-value=4.2 Score=43.13 Aligned_cols=47 Identities=30% Similarity=0.373 Sum_probs=35.8
Q ss_pred CCCCcHHHHHHHHHHhCCCC--CccEEEEcCCcCchHHhhhc-----CccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDR--KNLSVYIGDSVGDLLCLLEA-----DIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~--~~~viyiGDs~~Dl~~l~~A-----d~givi~ 502 (563)
.+.+|..+++.+++..+... ....+|+||-.||-.++... ++||.++
T Consensus 280 ~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG 333 (366)
T PLN03017 280 IEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS 333 (366)
T ss_pred CCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC
Confidence 36799999999998654321 23589999999999998865 4577776
No 199
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=72.58 E-value=1.9 Score=48.12 Aligned_cols=23 Identities=30% Similarity=0.254 Sum_probs=19.4
Q ss_pred CCeEEeeccccceecccchHHHH
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILA 284 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la 284 (563)
+-.+||+|.|||||+.|+++-+.
T Consensus 529 n~kIVISDIDGTITKSDvLGh~l 551 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVL 551 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhh
Confidence 45689999999999999876654
No 200
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=71.96 E-value=14 Score=35.70 Aligned_cols=37 Identities=8% Similarity=0.099 Sum_probs=32.1
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 427 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~ 427 (563)
...|||+.+|++.+.++ .+++|.|++ +..+++.++..
T Consensus 44 ~~kRP~l~eFL~~~~~~----feIvVwTAa-~~~ya~~~l~~ 80 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYED----YDIVIWSAT-SMKWIEIKMTE 80 (195)
T ss_pred EEeCCCHHHHHHHHHhC----CEEEEEecC-CHHHHHHHHHH
Confidence 46899999999999985 899999998 68888888765
No 201
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=70.75 E-value=11 Score=35.21 Aligned_cols=24 Identities=8% Similarity=0.249 Sum_probs=19.6
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEcc
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSY 414 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~ 414 (563)
+.|++.+.|+.+.+.| +.++|||.
T Consensus 30 ~~~~v~~~L~~l~~~G---y~IvIvTN 53 (159)
T PF08645_consen 30 FPPGVPEALRELHKKG---YKIVIVTN 53 (159)
T ss_dssp C-TTHHHHHHHHHHTT---EEEEEEEE
T ss_pred cchhHHHHHHHHHhcC---CeEEEEeC
Confidence 4556888899999989 99999994
No 202
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=70.09 E-value=3.3 Score=44.22 Aligned_cols=26 Identities=27% Similarity=0.332 Sum_probs=21.4
Q ss_pred CCeEEeeccccceecccchHHHHHHH
Q 008499 262 DRLIIFSDFDLTCTIVDSSAILAEIA 287 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~~~la~~~ 287 (563)
.+.+||+|.|||||+.|...-+-++.
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~mi 399 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMI 399 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHh
Confidence 46699999999999999886666544
No 203
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=68.45 E-value=5.8 Score=39.91 Aligned_cols=42 Identities=24% Similarity=0.336 Sum_probs=32.2
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
+...++..+++.+. ...++++|||+. +|+.+...+++ .+.+.
T Consensus 181 ~p~~~~~~~~~~~~-~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 224 (257)
T TIGR01458 181 SKTFFLEALRATGC-EPEEAVMIGDDCRDDVGGAQDCGMRGIQVR 224 (257)
T ss_pred CHHHHHHHHHHhCC-ChhhEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 45677777776654 357899999996 99999999998 45553
No 204
>PLN02151 trehalose-phosphatase
Probab=68.24 E-value=6.2 Score=41.73 Aligned_cols=47 Identities=28% Similarity=0.352 Sum_probs=35.0
Q ss_pred CCCCcHHHHHHHHHHhCCCCC--ccEEEEcCCcCchHHhhhc-----CccEEEc
Q 008499 456 SPIDKVQAFNNTLEKYGTDRK--NLSVYIGDSVGDLLCLLEA-----DIGIVIG 502 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~--~~viyiGDs~~Dl~~l~~A-----d~givi~ 502 (563)
.+.+|..+++.++...+.... ..++|+||-.||-.++... |+||.++
T Consensus 266 ~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg 319 (354)
T PLN02151 266 IKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS 319 (354)
T ss_pred CCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec
Confidence 367999999999986543211 2489999999999998864 5566665
No 205
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=67.66 E-value=5.1 Score=36.80 Aligned_cols=38 Identities=13% Similarity=0.301 Sum_probs=30.2
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 427 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~ 427 (563)
.+.+|||+.+|++++.+. ..++|.|.+ +..+.+.++..
T Consensus 34 ~v~~RP~l~~FL~~l~~~----~ev~i~T~~-~~~ya~~v~~~ 71 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH----YEVVIWTSA-SEEYAEPVLDA 71 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH----CEEEEE-SS--HHHHHHHHHH
T ss_pred eEeeCchHHHHHHHHHHh----ceEEEEEee-hhhhhhHHHHh
Confidence 467899999999999765 799999999 78888888765
No 206
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=67.33 E-value=2.8 Score=41.77 Aligned_cols=15 Identities=27% Similarity=0.324 Sum_probs=13.3
Q ss_pred CCeEEeeccccceec
Q 008499 262 DRLIIFSDFDLTCTI 276 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~ 276 (563)
++.++++||||||+.
T Consensus 2 ~~~~l~lD~DGTL~~ 16 (244)
T TIGR00685 2 RKRAFFFDYDGTLSE 16 (244)
T ss_pred CcEEEEEecCccccC
Confidence 578899999999995
No 207
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=66.90 E-value=4.4 Score=45.47 Aligned_cols=44 Identities=32% Similarity=0.428 Sum_probs=35.3
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCccEEEcCC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIGIVIGSS 504 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~givi~~~ 504 (563)
....|.++++.+..+ ...+-.-|||+||-++|+.||+||.+.+.
T Consensus 569 fpehKy~iV~~Lq~r-----~hi~gmtgdgvndapaLKkAdigiava~a 612 (942)
T KOG0205|consen 569 FPEHKYEIVKILQER-----KHIVGMTGDGVNDAPALKKADIGIAVADA 612 (942)
T ss_pred CHHHHHHHHHHHhhc-----CceecccCCCcccchhhcccccceeeccc
Confidence 346788888887763 23455799999999999999999999754
No 208
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=63.98 E-value=9 Score=32.71 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=22.4
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~g 415 (563)
.+-||+.++++.++++| .++++||.|
T Consensus 14 ~~ipga~e~l~~L~~~g---~~~~~lTNn 39 (101)
T PF13344_consen 14 EPIPGAVEALDALRERG---KPVVFLTNN 39 (101)
T ss_dssp EE-TTHHHHHHHHHHTT---SEEEEEES-
T ss_pred CcCcCHHHHHHHHHHcC---CCEEEEeCC
Confidence 46799999999999999 999999987
No 209
>PRK10444 UMP phosphatase; Provisional
Probab=62.78 E-value=12 Score=37.42 Aligned_cols=45 Identities=20% Similarity=0.287 Sum_probs=34.1
Q ss_pred CCCcHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
|--+...+...++..+. ...++++|||+. +|+.+...+++ .+.+.
T Consensus 173 gKP~~~~~~~~~~~~~~-~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~ 219 (248)
T PRK10444 173 GKPSPWIIRAALNKMQA-HSEETVIVGDNLRTDILAGFQAGLETILVL 219 (248)
T ss_pred CCCCHHHHHHHHHHcCC-CcccEEEECCCcHHHHHHHHHcCCCEEEEC
Confidence 43455777777776654 357899999997 99999999998 45553
No 210
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=62.15 E-value=5.7 Score=40.22 Aligned_cols=15 Identities=27% Similarity=0.169 Sum_probs=13.6
Q ss_pred CCeEEeeccccceec
Q 008499 262 DRLIIFSDFDLTCTI 276 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~ 276 (563)
.+.+|++||||||+.
T Consensus 13 ~~~li~~D~DGTLl~ 27 (266)
T PRK10187 13 ANYAWFFDLDGTLAE 27 (266)
T ss_pred CCEEEEEecCCCCCC
Confidence 468999999999997
No 211
>PLN02580 trehalose-phosphatase
Probab=62.08 E-value=4.1 Score=43.57 Aligned_cols=16 Identities=31% Similarity=0.615 Sum_probs=14.1
Q ss_pred CCCeEEeeccccceec
Q 008499 261 GDRLIIFSDFDLTCTI 276 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~ 276 (563)
.+++++++||||||+.
T Consensus 117 ~k~~~LfLDyDGTLaP 132 (384)
T PLN02580 117 GKKIALFLDYDGTLSP 132 (384)
T ss_pred cCCeEEEEecCCccCC
Confidence 4789999999999984
No 212
>PF14518 Haem_oxygenas_2: Iron-containing redox enzyme; PDB: 3BJD_B.
Probab=62.04 E-value=43 Score=28.37 Aligned_cols=63 Identities=19% Similarity=0.207 Sum_probs=35.8
Q ss_pred HHHHHHHHHhCCCccc---ccCCChhHHHHHHHHHHHhc-CCCCCCCCCCCCCCchhhhhhhHHHHHHHHHHHHH----H
Q 008499 96 KMHDSFVKEWGTDLAK---MATVNSATVKYTEFLLATAS-GKVEGVKGPGKLATPFEKTKVAAYTLGAMSPCMRL----Y 167 (563)
Q Consensus 96 ~~h~~~~~~~gi~~~~---~~~~~p~~~~Y~~fl~~~a~-~~~~~~~~~~~~~~~~~~~~~~a~~l~Al~pC~~~----Y 167 (563)
.+++++++.+|++.+. .....|.+.++.+.++..+. ... +..++++++.-+.. |
T Consensus 20 ~Lf~~~L~~~Gi~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~------------------~~~~lG~~~~~E~~~~~~~ 81 (106)
T PF14518_consen 20 ELFRRFLRALGIDDEPGAYRDPYPPETLALINLFLALCLHRSH------------------YPEALGALLATESSVPQIY 81 (106)
T ss_dssp HHHHHHHHHTT-----TT-----HHHHHHHHHHHHHH--H-SS------------------THHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHcCCCCccccccccCCHHHHHHHHHHHHhcccchh------------------HHHHHHHHHHHhhcChHHH
Confidence 6888899999999862 22356789999999988774 332 24667777766554 4
Q ss_pred HHHHHHHHh
Q 008499 168 AFLGKEFHA 176 (563)
Q Consensus 168 ~~ig~~~~~ 176 (563)
..+.+.+.+
T Consensus 82 ~~~~~~l~r 90 (106)
T PF14518_consen 82 RRLIKGLRR 90 (106)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
No 213
>COG1458 Predicted DNA-binding protein containing PIN domain [General function prediction only]
Probab=61.80 E-value=7 Score=37.34 Aligned_cols=42 Identities=31% Similarity=0.409 Sum_probs=35.3
Q ss_pred EEcCCcCchHHhhhcCc--cEEEcCChhHHHHHHhhCCeeeecC
Q 008499 481 YIGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 481 yiGDs~~Dl~~l~~Ad~--givi~~~~~L~~~~~~~gi~~~p~~ 522 (563)
-+=||.-|+..|+.|-- |.++.++.-+++++++.|++|++-.
T Consensus 157 GiLDSapDlDvLLLAkELdaavVssD~Gir~WAe~LGlrfv~a~ 200 (221)
T COG1458 157 GILDSAPDLDVLLLAKELDAAVVSSDEGIRTWAEKLGLRFVDAF 200 (221)
T ss_pred ccccccchhHHHHHHHHhCceEEecchhHHHHHHHhCCeeeCHh
Confidence 35599999999998733 6777778889999999999999765
No 214
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=59.91 E-value=31 Score=29.54 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=41.4
Q ss_pred cEEEEccc-cC-hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcC
Q 008499 408 NVHVLSYC-WC-GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 484 (563)
Q Consensus 408 ~v~IvS~g-ws-~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGD 484 (563)
|++-||.+ |. -+++...+.. +++.-.++-.++ ++..++-+.. ....-|...+++++.... ..+.|.|||
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~~~~~P~G~~~Lr~~---~~~~~~~~~~--~~~~~K~~~i~~i~~~fP---~~kfiLIGD 72 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLRRNGFPAGPLLLRDY---GPSLSGLFKS--GAEEHKRDNIERILRDFP---ERKFILIGD 72 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHHhcCCCCCceEcccC---CccccccccC--CchhHHHHHHHHHHHHCC---CCcEEEEee
Confidence 46677774 21 2345555544 565444444444 1222222211 111469999999998763 368999999
Q ss_pred Cc-CchH
Q 008499 485 SV-GDLL 490 (563)
Q Consensus 485 s~-~Dl~ 490 (563)
|- .|.+
T Consensus 73 sgq~Dpe 79 (100)
T PF09949_consen 73 SGQHDPE 79 (100)
T ss_pred CCCcCHH
Confidence 74 4543
No 215
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=58.41 E-value=55 Score=31.33 Aligned_cols=97 Identities=12% Similarity=0.135 Sum_probs=60.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcH--H
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKV--Q 462 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~--~ 462 (563)
+-.+-|.+.+++++-++.| .+++|-|.| |-.-=.-.++ +..+-++ ++.+.|.|+..+ ..|. .
T Consensus 101 kahlypDav~~ik~wk~~g---~~vyiYSSG-SV~AQkL~Fg------hs~agdL---~~lfsGyfDtti---G~KrE~~ 164 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALG---MRVYIYSSG-SVKAQKLFFG------HSDAGDL---NSLFSGYFDTTI---GKKRESQ 164 (229)
T ss_pred ccccCHhHHHHHHHHHHcC---CcEEEEcCC-CchhHHHhhc------ccccccH---Hhhhcceeeccc---cccccch
Confidence 4578899999999988888 999999998 5221111111 1111111 234566665321 1122 2
Q ss_pred HHHHHHHHhCCCCCccEEEEcCCcCchHHhhhcCcc
Q 008499 463 AFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLEADIG 498 (563)
Q Consensus 463 ~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~g 498 (563)
--.++....+.. +..++++.|-...|.+...++..
T Consensus 165 SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~ 199 (229)
T COG4229 165 SYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLA 199 (229)
T ss_pred hHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchh
Confidence 234455555543 46799999999999999998873
No 216
>PLN02151 trehalose-phosphatase
Probab=57.69 E-value=5.5 Score=42.09 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=14.1
Q ss_pred CCCeEEeeccccceec
Q 008499 261 GDRLIIFSDFDLTCTI 276 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~ 276 (563)
.+++++++||||||+.
T Consensus 96 ~~~~ll~lDyDGTL~P 111 (354)
T PLN02151 96 GKQIVMFLDYDGTLSP 111 (354)
T ss_pred CCceEEEEecCccCCC
Confidence 4789999999999993
No 217
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=57.52 E-value=16 Score=36.20 Aligned_cols=42 Identities=17% Similarity=0.221 Sum_probs=30.6
Q ss_pred CCCcHHHHHHHHHHhCCCCCccE-EEEcCCc-CchHHhhhcCccE
Q 008499 457 PIDKVQAFNNTLEKYGTDRKNLS-VYIGDSV-GDLLCLLEADIGI 499 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~~~~~v-iyiGDs~-~Dl~~l~~Ad~gi 499 (563)
+.-+...++..+++.+... .++ ++|||+. +|+.+...+++..
T Consensus 187 ~KP~~~~~~~~~~~~~~~~-~~~~~~IGD~~~~Di~~A~~~G~~~ 230 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARP-ERRDVMVGDNLRTDILGAKNAGFDT 230 (236)
T ss_pred cCCCHHHHHHHHHHhCCCC-ccceEEECCCcHHHHHHHHHCCCcE
Confidence 3344567777777665433 444 9999998 8999999999743
No 218
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=56.86 E-value=5.8 Score=40.28 Aligned_cols=16 Identities=31% Similarity=0.511 Sum_probs=0.0
Q ss_pred CCCCeEEeecccccee
Q 008499 260 AGDRLIIFSDFDLTCT 275 (563)
Q Consensus 260 ~~~~~~ii~DFD~TiT 275 (563)
...+.++++|||||+|
T Consensus 15 ~a~~~~~~lDyDGTl~ 30 (266)
T COG1877 15 NARKRLLFLDYDGTLT 30 (266)
T ss_pred cccceEEEEecccccc
No 219
>PLN03017 trehalose-phosphatase
Probab=56.46 E-value=6 Score=41.97 Aligned_cols=15 Identities=33% Similarity=0.767 Sum_probs=13.6
Q ss_pred CCCeEEeecccccee
Q 008499 261 GDRLIIFSDFDLTCT 275 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT 275 (563)
.++++|++||||||+
T Consensus 109 ~k~~llflD~DGTL~ 123 (366)
T PLN03017 109 GKQIVMFLDYDGTLS 123 (366)
T ss_pred CCCeEEEEecCCcCc
Confidence 468999999999999
No 220
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=54.82 E-value=21 Score=35.60 Aligned_cols=42 Identities=19% Similarity=0.442 Sum_probs=32.6
Q ss_pred cHHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEEc
Q 008499 460 KVQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVIG 502 (563)
Q Consensus 460 K~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi~ 502 (563)
+...++..++..+.+ ..++++|||+. +|+.+...+++ .+.+.
T Consensus 180 ~~~~~~~~~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~v~v~ 223 (249)
T TIGR01457 180 NAIIMEKAVEHLGTE-REETLMVGDNYLTDIRAGIDAGIDTLLVH 223 (249)
T ss_pred hHHHHHHHHHHcCCC-cccEEEECCCchhhHHHHHHcCCcEEEEc
Confidence 356778777776653 47899999996 99999999998 44443
No 221
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=54.29 E-value=6.6 Score=39.09 Aligned_cols=14 Identities=43% Similarity=0.529 Sum_probs=12.8
Q ss_pred CeEEeeccccceec
Q 008499 263 RLIIFSDFDLTCTI 276 (563)
Q Consensus 263 ~~~ii~DFD~TiT~ 276 (563)
|++|++|+|||+..
T Consensus 1 ~~li~tDlDGTLl~ 14 (249)
T TIGR01485 1 RLLLVSDLDNTLVD 14 (249)
T ss_pred CeEEEEcCCCcCcC
Confidence 57999999999997
No 222
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=54.01 E-value=6.7 Score=37.26 Aligned_cols=17 Identities=12% Similarity=0.046 Sum_probs=14.2
Q ss_pred CCCeEEeeccccceecc
Q 008499 261 GDRLIIFSDFDLTCTIV 277 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~ 277 (563)
+...+|++|+|||||..
T Consensus 19 ~~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 19 ENIRLLICDVDGVFSDG 35 (183)
T ss_pred hCceEEEEcCCeeeecC
Confidence 34669999999999974
No 223
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=53.87 E-value=13 Score=34.41 Aligned_cols=38 Identities=16% Similarity=0.087 Sum_probs=33.1
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 427 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~ 427 (563)
.+.+|||+.+|++.+.+ . ++++|+|.+ +.++.+.+++.
T Consensus 56 ~v~~rPgv~efL~~l~~-~---yel~I~T~~-~~~yA~~vl~~ 93 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASK-L---YEMHVYTMG-TRAYAQAIAKL 93 (156)
T ss_pred EEEECCCHHHHHHHHHh-h---cEEEEEeCC-cHHHHHHHHHH
Confidence 57899999999999985 3 799999999 78888888875
No 224
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=53.61 E-value=6.6 Score=39.28 Aligned_cols=14 Identities=29% Similarity=0.218 Sum_probs=12.4
Q ss_pred CCeEEeecccccee
Q 008499 262 DRLIIFSDFDLTCT 275 (563)
Q Consensus 262 ~~~~ii~DFD~TiT 275 (563)
++.++++|||+|++
T Consensus 1 ~~~ll~sDlD~Tl~ 14 (247)
T PF05116_consen 1 PPRLLASDLDGTLI 14 (247)
T ss_dssp -SEEEEEETBTTTB
T ss_pred CCEEEEEECCCCCc
Confidence 36899999999999
No 225
>PLN02423 phosphomannomutase
Probab=52.83 E-value=7.5 Score=38.82 Aligned_cols=18 Identities=28% Similarity=0.134 Sum_probs=14.4
Q ss_pred CCCeEEeeccccceeccc
Q 008499 261 GDRLIIFSDFDLTCTIVD 278 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~D 278 (563)
+++.++++|+|||+...+
T Consensus 5 ~~~~i~~~D~DGTLl~~~ 22 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPR 22 (245)
T ss_pred ccceEEEEeccCCCcCCC
Confidence 467788899999999653
No 226
>PLN02645 phosphoglycolate phosphatase
Probab=51.99 E-value=21 Score=37.01 Aligned_cols=40 Identities=18% Similarity=0.329 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCc-CchHHhhhcCc-cEEE
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSV-GDLLCLLEADI-GIVI 501 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~-~Dl~~l~~Ad~-givi 501 (563)
...++..++..+. ...++++|||+. +|+.+...+++ .|.+
T Consensus 233 p~~~~~a~~~~~~-~~~~~~~VGD~~~~Di~~A~~aG~~~ilV 274 (311)
T PLN02645 233 TFMMDYLANKFGI-EKSQICMVGDRLDTDILFGQNGGCKTLLV 274 (311)
T ss_pred HHHHHHHHHHcCC-CcccEEEEcCCcHHHHHHHHHcCCCEEEE
Confidence 4566777766654 357899999997 99999999998 4444
No 227
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=51.78 E-value=1.6e+02 Score=31.69 Aligned_cols=136 Identities=9% Similarity=0.100 Sum_probs=70.8
Q ss_pred CCHHHHHHHhccCCCCchH-HHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCccc
Q 008499 374 INLEDIKKAGERLSLQDGC-TTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEII 451 (563)
Q Consensus 374 i~~~~i~~~~~~i~lrpG~-~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~ 451 (563)
++.+++.++.+++.+ |++ .+-.+++++ ..+.||=.|=.+-.+-..|.. |++.+.++=++..-..+...--+.
T Consensus 15 l~~~~~~ry~Rq~~l-~~~g~~~q~~L~~-----~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~ 88 (392)
T PRK07878 15 LTRDEVARYSRHLII-PDVGVDGQKRLKN-----ARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIH 88 (392)
T ss_pred CCHHHHHHhhheech-hhcCHHHHHHHhc-----CCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCEecCccccccccc
Confidence 455555555554433 222 344455553 456676654224444444544 776665554443222221110011
Q ss_pred ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCc---CchHHhhhcCccEEEcC--Ch----hHHHHHHhhCCeee
Q 008499 452 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV---GDLLCLLEADIGIVIGS--SS----SLRRVGSQFGVTFI 519 (563)
Q Consensus 452 ~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~---~Dl~~l~~Ad~givi~~--~~----~L~~~~~~~gi~~~ 519 (563)
...-.|..|+..+.+.+.+.+. .-++..+-... ++...+..+| +|+.. +. .+-++|.+.|++++
T Consensus 89 ~~~diG~~Ka~~a~~~l~~~np--~v~i~~~~~~i~~~~~~~~~~~~D--~Vvd~~d~~~~r~~ln~~~~~~~~p~v 161 (392)
T PRK07878 89 GQSDVGRSKAQSARDSIVEINP--LVNVRLHEFRLDPSNAVELFSQYD--LILDGTDNFATRYLVNDAAVLAGKPYV 161 (392)
T ss_pred ChhcCCChHHHHHHHHHHHhCC--CcEEEEEeccCChhHHHHHHhcCC--EEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 1223466799888887776653 23444444333 3345567788 55532 21 46688999998877
No 228
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=49.72 E-value=2.5e+02 Score=27.92 Aligned_cols=138 Identities=13% Similarity=0.108 Sum_probs=68.1
Q ss_pred CCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccc
Q 008499 374 INLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIE 452 (563)
Q Consensus 374 i~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~ 452 (563)
++.++++++.+++.++.=-.+--+.+++ ..+.||-.|=.+-.+-..|.. |++.+.|+=.+..-..+...--+..
T Consensus 5 l~~~~~~rY~Rqi~l~~~g~~~Q~~L~~-----~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~ 79 (245)
T PRK05690 5 LSDEEMLRYNRQIILRGFDFDGQEKLKA-----ARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHD 79 (245)
T ss_pred CCHHHHHHHHHhccchhcCHHHHHHhcC-----CeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCC
Confidence 3555555665555443211222334432 467777654123333334444 7765555544432221110000111
Q ss_pred cCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcCc---hHHhhhcCccEEEc--CC----hhHHHHHHhhCCeeee
Q 008499 453 KVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVGD---LLCLLEADIGIVIG--SS----SSLRRVGSQFGVTFIP 520 (563)
Q Consensus 453 ~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~D---l~~l~~Ad~givi~--~~----~~L~~~~~~~gi~~~p 520 (563)
...-|..|+..+.+.+.+.+. .-++..+-...+. ...+...| +++. ++ ..+.++|.+++++++-
T Consensus 80 ~~dvG~~Ka~~a~~~l~~lnp--~v~i~~~~~~i~~~~~~~~~~~~D--iVi~~~D~~~~r~~ln~~~~~~~ip~v~ 152 (245)
T PRK05690 80 DATIGQPKVESARAALARINP--HIAIETINARLDDDELAALIAGHD--LVLDCTDNVATRNQLNRACFAAKKPLVS 152 (245)
T ss_pred hhhCCChHHHHHHHHHHHHCC--CCEEEEEeccCCHHHHHHHHhcCC--EEEecCCCHHHHHHHHHHHHHhCCEEEE
Confidence 122366799888887776653 2344454433332 23455677 5553 22 2477889999998874
No 229
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=49.66 E-value=1.6e+02 Score=31.36 Aligned_cols=110 Identities=13% Similarity=0.115 Sum_probs=56.5
Q ss_pred CcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEc--
Q 008499 407 ANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIG-- 483 (563)
Q Consensus 407 ~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiG-- 483 (563)
..+.||-.|-.+-.|-..|.. |+..+.++=....-..+...--+....-.|..|...+.+.+.+.+. .-++..+=
T Consensus 136 ~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np--~v~v~~~~~~ 213 (376)
T PRK08762 136 ARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP--DVQVEAVQER 213 (376)
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCC--CCEEEEEecc
Confidence 467777655334555555555 7766655544322111111001111122366899888877766542 12333221
Q ss_pred -CCcCchHHhhhcCccEEEcC--Ch----hHHHHHHhhCCeeee
Q 008499 484 -DSVGDLLCLLEADIGIVIGS--SS----SLRRVGSQFGVTFIP 520 (563)
Q Consensus 484 -Ds~~Dl~~l~~Ad~givi~~--~~----~L~~~~~~~gi~~~p 520 (563)
++.+....+..+| +|+.. +. .+-++|.+++++++-
T Consensus 214 ~~~~~~~~~~~~~D--~Vv~~~d~~~~r~~ln~~~~~~~ip~i~ 255 (376)
T PRK08762 214 VTSDNVEALLQDVD--VVVDGADNFPTRYLLNDACVKLGKPLVY 255 (376)
T ss_pred CChHHHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEEE
Confidence 2222233456677 55542 21 467889999998873
No 230
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=49.38 E-value=23 Score=35.97 Aligned_cols=39 Identities=15% Similarity=0.316 Sum_probs=29.8
Q ss_pred HHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhhcCc-cEEE
Q 008499 462 QAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLEADI-GIVI 501 (563)
Q Consensus 462 ~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~Ad~-givi 501 (563)
..+...++..+. .+.++++|||+ .+|+.+...+++ .|.+
T Consensus 206 ~~~~~~~~~~~~-~~~~~lmIGD~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 206 YMFECITENFSI-DPARTLMVGDRLETDILFGHRCGMTTVLV 246 (279)
T ss_pred HHHHHHHHHhCC-ChhhEEEECCChHHHHHHHHHcCCcEEEE
Confidence 466666666654 35789999999 599999999998 3444
No 231
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=47.15 E-value=8.3 Score=44.93 Aligned_cols=17 Identities=24% Similarity=0.346 Sum_probs=14.6
Q ss_pred CCCeEEeeccccceecc
Q 008499 261 GDRLIIFSDFDLTCTIV 277 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~ 277 (563)
.++.+|++||||||+..
T Consensus 490 ~~~rLi~~D~DGTL~~~ 506 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPF 506 (726)
T ss_pred ccceEEEEecCccccCC
Confidence 46789999999999963
No 232
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=45.89 E-value=15 Score=36.21 Aligned_cols=47 Identities=28% Similarity=0.404 Sum_probs=30.1
Q ss_pred CCCcHHHHHHHHHHhCCC--CCccEEEEcCCcCchHHhhhc------CccEEEcC
Q 008499 457 PIDKVQAFNNTLEKYGTD--RKNLSVYIGDSVGDLLCLLEA------DIGIVIGS 503 (563)
Q Consensus 457 g~~K~~~l~~~~~~~~~~--~~~~viyiGDs~~Dl~~l~~A------d~givi~~ 503 (563)
+..|..+++.+++..+.. ....++|+||..||-.|+... +++|.++.
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~ 217 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGS 217 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEe
Confidence 445999999999865421 124699999999999999884 34555553
No 233
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=44.97 E-value=9.8 Score=36.16 Aligned_cols=14 Identities=29% Similarity=-0.107 Sum_probs=12.3
Q ss_pred EEeeccccceeccc
Q 008499 265 IIFSDFDLTCTIVD 278 (563)
Q Consensus 265 ~ii~DFD~TiT~~D 278 (563)
.|+||.|||||...
T Consensus 3 ~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 3 AICFDKTGTLTQGK 16 (215)
T ss_dssp EEEEECCTTTBESH
T ss_pred EEEEecCCCcccCe
Confidence 68999999999763
No 234
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=44.86 E-value=20 Score=42.28 Aligned_cols=42 Identities=14% Similarity=-0.006 Sum_probs=29.4
Q ss_pred CCCCCcHHHHHHHHHHhC-----CCCCccEEEEcCCcC-chHHhhhcC
Q 008499 455 ESPIDKVQAFNNTLEKYG-----TDRKNLSVYIGDSVG-DLLCLLEAD 496 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~-----~~~~~~viyiGDs~~-Dl~~l~~Ad 496 (563)
..+.+|..+++.++.+.. ....+-++.+||..+ |=.|+..-+
T Consensus 674 p~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 674 AIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred cCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 356789999999987541 012356889999864 888877543
No 235
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=44.40 E-value=8.8 Score=37.77 Aligned_cols=14 Identities=36% Similarity=0.351 Sum_probs=11.7
Q ss_pred EEeeccccceeccc
Q 008499 265 IIFSDFDLTCTIVD 278 (563)
Q Consensus 265 ~ii~DFD~TiT~~D 278 (563)
+|++|+|||+...|
T Consensus 1 li~~DlDgTLl~~~ 14 (236)
T TIGR02471 1 LIITDLDNTLLGDD 14 (236)
T ss_pred CeEEeccccccCCH
Confidence 58999999999743
No 236
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=43.65 E-value=12 Score=33.56 Aligned_cols=14 Identities=29% Similarity=0.404 Sum_probs=0.0
Q ss_pred EEeeccccceeccc
Q 008499 265 IIFSDFDLTCTIVD 278 (563)
Q Consensus 265 ~ii~DFD~TiT~~D 278 (563)
+|++|.||||+..+
T Consensus 3 ~i~~DiDGTL~~~~ 16 (126)
T TIGR01689 3 RLVMDLDNTITLTE 16 (126)
T ss_pred EEEEeCCCCcccCC
No 237
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=42.74 E-value=26 Score=41.69 Aligned_cols=18 Identities=22% Similarity=0.108 Sum_probs=14.8
Q ss_pred CCCeEEeeccccceeccc
Q 008499 261 GDRLIIFSDFDLTCTIVD 278 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~D 278 (563)
.++.+|++||||||+...
T Consensus 594 ~~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQA 611 (854)
T ss_pred hcCeEEEEecCCcccCCc
Confidence 367899999999999543
No 238
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=40.95 E-value=20 Score=42.86 Aligned_cols=40 Identities=18% Similarity=0.109 Sum_probs=28.5
Q ss_pred CCCCCcHHHHHHHHHHhCC-----CCCccEEEEcCCcC-chHHhhh
Q 008499 455 ESPIDKVQAFNNTLEKYGT-----DRKNLSVYIGDSVG-DLLCLLE 494 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~-----~~~~~viyiGDs~~-Dl~~l~~ 494 (563)
..+.+|..+++.++..... ...+-|+.+||-.+ |=.|+..
T Consensus 764 P~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~ 809 (934)
T PLN03064 764 PVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTF 809 (934)
T ss_pred cCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHH
Confidence 3577999999999975321 12466889999754 8777766
No 239
>PF08745 UPF0278: UPF0278 family; InterPro: IPR022785 This entry contains proteins of the UPF0278 family and proteins containing PIN domains. Members of the UPF0278 family are uncharacterised and about 200 amino acids in length.; PDB: 2LCQ_A.
Probab=38.95 E-value=16 Score=35.32 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=24.2
Q ss_pred EEcCCcCchHHhhhcCc--cEEEcCChhHHHHHHhhCCeeeecC
Q 008499 481 YIGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 481 yiGDs~~Dl~~l~~Ad~--givi~~~~~L~~~~~~~gi~~~p~~ 522 (563)
.+=||..|+..+..|-- |+++.++..+..+|++.|+++++-.
T Consensus 150 G~ldS~~D~dvl~LA~El~a~lvt~D~gi~~~A~~lGi~~i~~~ 193 (205)
T PF08745_consen 150 GILDSREDIDVLLLALELDAVLVTDDYGIQNWAEKLGIRFIDAR 193 (205)
T ss_dssp -----HHHHHHHHHHHHHT--EE---HHHHHHHHHTT--EE---
T ss_pred ccCCChHhHHHHHHHHHcCCEEEeCCHhHHHHHHHCCCEEEecc
Confidence 35589999999988732 7888888899999999999999654
No 240
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=38.87 E-value=13 Score=40.66 Aligned_cols=38 Identities=8% Similarity=0.120 Sum_probs=27.5
Q ss_pred CCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC
Q 008499 386 LSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS 427 (563)
Q Consensus 386 i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~ 427 (563)
+.-.|....+++.++++| ..+.+++.+ .-++.+.++.-
T Consensus 182 i~k~~~l~~~L~~lr~~G---KklFLiTNS-~~~yt~~~M~y 219 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAG---KKLFLITNS-PFDYTNAVMSY 219 (448)
T ss_dssp EE--CHHHHHHHHHHCCT----EEEEE-SS--HHHHHHHHHH
T ss_pred ccCCchHHHHHHHHHhcC---ceEEEecCC-CCchhhhhhhh
Confidence 445778999999999988 889999987 56788877664
No 241
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=38.69 E-value=15 Score=32.62 Aligned_cols=14 Identities=29% Similarity=0.219 Sum_probs=12.1
Q ss_pred EEeeccccceeccc
Q 008499 265 IIFSDFDLTCTIVD 278 (563)
Q Consensus 265 ~ii~DFD~TiT~~D 278 (563)
++++|+|+||+..+
T Consensus 2 li~~DlD~Tl~~~~ 15 (128)
T TIGR01681 2 VIVFDLDNTLWTGE 15 (128)
T ss_pred EEEEeCCCCCCCCC
Confidence 68999999999764
No 242
>PLN02382 probable sucrose-phosphatase
Probab=38.05 E-value=20 Score=38.80 Aligned_cols=16 Identities=44% Similarity=0.461 Sum_probs=14.6
Q ss_pred CCeEEeeccccceecc
Q 008499 262 DRLIIFSDFDLTCTIV 277 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~ 277 (563)
.+++|++|+|||+...
T Consensus 8 ~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 8 PRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCEEEEEcCCCcCcCC
Confidence 6899999999999965
No 243
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=37.78 E-value=3.1e+02 Score=26.76 Aligned_cols=130 Identities=15% Similarity=0.206 Sum_probs=65.2
Q ss_pred chHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC--CC--CcceEEeeccEecCccccCcccc-----cCCCCCCc
Q 008499 390 DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS--GL--NALNVHANEFSFKESISTGEIIE-----KVESPIDK 460 (563)
Q Consensus 390 pG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~--~l--~~~~I~aN~l~~~~g~~tG~~~~-----~~~~g~~K 460 (563)
.+..+.|.++++.+ .+.-+-.+++|+ .++ .....- ++ ++..|+-=-+-|.+....|.-.+ .+..|..=
T Consensus 3 eql~~TFa~aK~en-knaLvtfiTaG~-P~v-~~T~kilkglq~gG~dIIELGvPfSDp~ADGPtIq~~n~~aL~ng~tl 79 (268)
T KOG4175|consen 3 EQLSETFARAKSEN-KNALVTFITAGD-PDV-STTAKILKGLQSGGSDIIELGVPFSDPLADGPTIQAANRRALLNGTTL 79 (268)
T ss_pred hHHHHHHHHHHhcC-CceEEEEEecCC-CcH-HHHHHHHHHHhcCCcCeEEecCccCccccCCchhhhhHHHHHHcCCcH
Confidence 34566777777665 335566778885 332 222221 22 23455544455555444443321 01112111
Q ss_pred HHHHHHHHHHhCCCCCccEEE---------EcCCcCchHHhhhcCc-cEEEcCC-----hhHHHHHHhhCCeeeecCc
Q 008499 461 VQAFNNTLEKYGTDRKNLSVY---------IGDSVGDLLCLLEADI-GIVIGSS-----SSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viy---------iGDs~~Dl~~l~~Ad~-givi~~~-----~~L~~~~~~~gi~~~p~~~ 523 (563)
...++-+...+.......+|. +||- +=+.-++.|+. |+++-+- ..|+..|+++|++++|+..
T Consensus 80 ~~i~emvk~ar~~gvt~PIiLmgYYNPIl~yG~e-~~iq~ak~aGanGfiivDlPpEEa~~~Rne~~k~gislvpLva 156 (268)
T KOG4175|consen 80 NSIIEMVKEARPQGVTCPIILMGYYNPILRYGVE-NYIQVAKNAGANGFIIVDLPPEEAETLRNEARKHGISLVPLVA 156 (268)
T ss_pred HHHHHHHHHhcccCcccceeeeecccHHHhhhHH-HHHHHHHhcCCCceEeccCChHHHHHHHHHHHhcCceEEEeeC
Confidence 122222222111111122333 4442 33555666777 8777533 2799999999999999963
No 244
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=37.18 E-value=17 Score=33.77 Aligned_cols=13 Identities=38% Similarity=0.327 Sum_probs=10.0
Q ss_pred EEeeccccceecc
Q 008499 265 IIFSDFDLTCTIV 277 (563)
Q Consensus 265 ~ii~DFD~TiT~~ 277 (563)
+++||+||||+..
T Consensus 2 ia~fD~DgTLi~~ 14 (159)
T PF08645_consen 2 IAFFDLDGTLIKT 14 (159)
T ss_dssp EEEE-SCTTTEE-
T ss_pred EEEEeCCCCccCC
Confidence 6899999999875
No 245
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=36.57 E-value=34 Score=39.31 Aligned_cols=18 Identities=22% Similarity=0.176 Sum_probs=14.9
Q ss_pred CCeEEeeccccceecccc
Q 008499 262 DRLIIFSDFDLTCTIVDS 279 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt 279 (563)
.+.+|++|+||||+..|+
T Consensus 415 ~~KLIfsDLDGTLLd~d~ 432 (694)
T PRK14502 415 FKKIVYTDLDGTLLNPLT 432 (694)
T ss_pred eeeEEEEECcCCCcCCCC
Confidence 456999999999998654
No 246
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=36.00 E-value=18 Score=34.02 Aligned_cols=16 Identities=19% Similarity=0.046 Sum_probs=13.6
Q ss_pred CCeEEeeccccceecc
Q 008499 262 DRLIIFSDFDLTCTIV 277 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~ 277 (563)
.-.++|||+||++|+.
T Consensus 6 ~i~~~v~d~dGv~tdg 21 (169)
T TIGR02726 6 NIKLVILDVDGVMTDG 21 (169)
T ss_pred cCeEEEEeCceeeECC
Confidence 4459999999999975
No 247
>PTZ00174 phosphomannomutase; Provisional
Probab=35.44 E-value=20 Score=35.69 Aligned_cols=16 Identities=31% Similarity=0.247 Sum_probs=13.7
Q ss_pred CeEEeeccccceeccc
Q 008499 263 RLIIFSDFDLTCTIVD 278 (563)
Q Consensus 263 ~~~ii~DFD~TiT~~D 278 (563)
..+|++|.||||...|
T Consensus 5 ~klia~DlDGTLL~~~ 20 (247)
T PTZ00174 5 KTILLFDVDGTLTKPR 20 (247)
T ss_pred CeEEEEECcCCCcCCC
Confidence 5689999999999765
No 248
>TIGR03875 RNA_lig_partner RNA ligase partner, MJ_0950 family. This uncharacterized protein family is found almost perfectly in the same set of genomes as the Pab1020 family described by model TIGR01209. These pairs are found mostly in Archaea, but also in a few bacteria (e.g. Alkalilimnicola ehrlichei MLHE-1, Aquifex aeolicus). While the partner protein has been described as homodimeric ligase that has RNA circularization activity, the function of this protein (also called UPF0278) is unknown.
Probab=35.03 E-value=36 Score=32.97 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=33.9
Q ss_pred EcCCcCchHHhhhcCc--cEEEcCChhHHHHHHhhCCeeee
Q 008499 482 IGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIP 520 (563)
Q Consensus 482 iGDs~~Dl~~l~~Ad~--givi~~~~~L~~~~~~~gi~~~p 520 (563)
+=||.+|+..+..|=- |+++.++-.+..+|++.|+++++
T Consensus 154 iLdS~~DidvlaLA~ELda~lvTdD~giqn~A~~Lgi~~~~ 194 (206)
T TIGR03875 154 ILDSAEDLDVLLLAKELDAAVVSADEGIRKWAERLGLRFVD 194 (206)
T ss_pred ccCchhhHHHHHHHHHcCcEEEeCcHHHHHHHHHcCCeeec
Confidence 5599999999888722 78888899999999999999987
No 249
>PRK07411 hypothetical protein; Validated
Probab=34.82 E-value=5.2e+02 Score=27.69 Aligned_cols=136 Identities=10% Similarity=0.081 Sum_probs=72.8
Q ss_pred CCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCccc-
Q 008499 374 INLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEII- 451 (563)
Q Consensus 374 i~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~- 451 (563)
++..++.++.+++.+..=-.+--+++++ ..|.||-.|=.+-.+-..|.. |++.+.++=++..-..+. .-.+.
T Consensus 11 l~~~~~~ry~Rq~~l~~~g~~~q~~L~~-----~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL-~RQ~l~ 84 (390)
T PRK07411 11 LSKDEYERYSRHLILPEVGLEGQKRLKA-----ASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNL-QRQVIH 84 (390)
T ss_pred CCHHHHHHhhceechhhcCHHHHHHHhc-----CcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEeccccc-CcCccc
Confidence 4555566665555443312344455553 457777654224444445554 776665544433221111 11111
Q ss_pred ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCc---CchHHhhhcCccEEEcC--C----hhHHHHHHhhCCeee
Q 008499 452 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSV---GDLLCLLEADIGIVIGS--S----SSLRRVGSQFGVTFI 519 (563)
Q Consensus 452 ~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~---~Dl~~l~~Ad~givi~~--~----~~L~~~~~~~gi~~~ 519 (563)
...-.|..|+....+-+.+.+. .-++..+-... ++...+...| +|+.. + -.|-++|.+.+++++
T Consensus 85 ~~~dvG~~Ka~~a~~~l~~~np--~v~v~~~~~~~~~~~~~~~~~~~D--~Vvd~~d~~~~r~~ln~~~~~~~~p~v 157 (390)
T PRK07411 85 GTSWVGKPKIESAKNRILEINP--YCQVDLYETRLSSENALDILAPYD--VVVDGTDNFPTRYLVNDACVLLNKPNV 157 (390)
T ss_pred ChHHCCCcHHHHHHHHHHHHCC--CCeEEEEecccCHHhHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 1122366799888888877653 23555555434 3345677788 55542 2 246788999998877
No 250
>PTZ00465 rhoptry-associated protein 1 (RAP-1); Provisional
Probab=34.79 E-value=6.4e+02 Score=27.92 Aligned_cols=57 Identities=18% Similarity=0.278 Sum_probs=37.7
Q ss_pred CCCCcchHHHHHHHHhHHhHHHhhcCHHHHHhhcCCCCH-------HH-HHHHHHhhHHHHHHHH
Q 008499 9 PSPEEEGLARRLWIKFKRESVFAMYSPFTVCLASGNLKL-------ET-FRHYIAQDFHFLKAFS 65 (563)
Q Consensus 9 ~~~~~~~~~~~lw~~~~~~~~~~~~hPFv~~la~GtL~~-------~~-f~~Yl~QD~~yl~~f~ 65 (563)
...+.-......|.++.+.-....+|.|+..|..-++.. |. .++|+-+=..|-+.|.
T Consensus 141 ~snPakn~~k~fWmRFr~gg~~g~Yh~FilnLL~kNv~~~~~~ndlE~fVnrYLYMATlYYKTYL 205 (565)
T PTZ00465 141 ASNPAKNSVKREWLRFRNGANHGDYHYFVTGLLNNNVVHEEGTTDVEYLVNKVLYMATMNYKTYL 205 (565)
T ss_pred ccCcccchhhHHHHHhccCCccchHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 344555677889998877666667899999999877742 22 3455555555555443
No 251
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=34.04 E-value=21 Score=31.42 Aligned_cols=12 Identities=33% Similarity=0.094 Sum_probs=10.9
Q ss_pred EEeeccccceec
Q 008499 265 IIFSDFDLTCTI 276 (563)
Q Consensus 265 ~ii~DFD~TiT~ 276 (563)
+++||+||||+.
T Consensus 2 ~~~~D~dgtL~~ 13 (132)
T TIGR01662 2 GVVLDLDGTLTD 13 (132)
T ss_pred EEEEeCCCceec
Confidence 689999999994
No 252
>cd01410 SIRT7 SIRT7: Eukaryotic and prokaryotic group (class4) which includes human sirtuin SIRT6, SIRT7, and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation. Sir2 proteins have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span.
Probab=33.98 E-value=3.2e+02 Score=26.44 Aligned_cols=47 Identities=19% Similarity=0.252 Sum_probs=34.1
Q ss_pred CccEEEEcCCcCch------HHhhhcCccEEEcCC------hhHHHHHHhhCCeeeecC
Q 008499 476 KNLSVYIGDSVGDL------LCLLEADIGIVIGSS------SSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 476 ~~~viyiGDs~~Dl------~~l~~Ad~givi~~~------~~L~~~~~~~gi~~~p~~ 522 (563)
+..|+++|++..+- ..+..||+-+++|.+ ..|.+.+.+.|.+++-+-
T Consensus 131 rP~VV~FgE~lp~~~~~~a~~~~~~aDlllviGTSl~V~pa~~l~~~~~~~g~~vi~iN 189 (206)
T cd01410 131 KDTIVDFGERLPPENWMGAAAAACRADLFLCLGTSLQVTPAANLPLKAARAGGRLVIVN 189 (206)
T ss_pred CCcEEECCCCCCHHHHHHHHHHHhcCCEEEEECcCceehhHHHHHHHHHhcCCeEEEEC
Confidence 46899999998773 233458988888855 357777888888777553
No 253
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=33.75 E-value=3.3e+02 Score=23.95 Aligned_cols=111 Identities=15% Similarity=0.238 Sum_probs=58.8
Q ss_pred CcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCC
Q 008499 407 ANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS 485 (563)
Q Consensus 407 ~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs 485 (563)
..+.|+-.|=.+-.+-..|.. |+..+.++=+...-..+...-.+......|..|..++++.+.+.+. .-++..+...
T Consensus 3 ~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np--~~~v~~~~~~ 80 (135)
T PF00899_consen 3 KRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP--DVEVEAIPEK 80 (135)
T ss_dssp -EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST--TSEEEEEESH
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcC--ceeeeeeecc
Confidence 356666654223333333443 7766655544433222221111222223477899999998887653 3466676666
Q ss_pred cCch---HHhhhcCccEEEc--CC----hhHHHHHHhhCCeeeec
Q 008499 486 VGDL---LCLLEADIGIVIG--SS----SSLRRVGSQFGVTFIPL 521 (563)
Q Consensus 486 ~~Dl---~~l~~Ad~givi~--~~----~~L~~~~~~~gi~~~p~ 521 (563)
.++- ..+..+| ++|. ++ ..|.++|++++++++--
T Consensus 81 ~~~~~~~~~~~~~d--~vi~~~d~~~~~~~l~~~~~~~~~p~i~~ 123 (135)
T PF00899_consen 81 IDEENIEELLKDYD--IVIDCVDSLAARLLLNEICREYGIPFIDA 123 (135)
T ss_dssp CSHHHHHHHHHTSS--EEEEESSSHHHHHHHHHHHHHTT-EEEEE
T ss_pred cccccccccccCCC--EEEEecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 6322 2233567 5553 22 25888999999977643
No 254
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=33.30 E-value=22 Score=32.24 Aligned_cols=14 Identities=21% Similarity=0.062 Sum_probs=11.9
Q ss_pred EEeeccccceeccc
Q 008499 265 IIFSDFDLTCTIVD 278 (563)
Q Consensus 265 ~ii~DFD~TiT~~D 278 (563)
.++||+||||+..-
T Consensus 2 ~~~~d~dgtl~~~~ 15 (147)
T TIGR01656 2 ALFLDRDGVINEDT 15 (147)
T ss_pred eEEEeCCCceeccC
Confidence 58999999999753
No 255
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=33.19 E-value=25 Score=36.17 Aligned_cols=20 Identities=15% Similarity=0.037 Sum_probs=16.1
Q ss_pred CCCCCCeEEeeccccceecc
Q 008499 258 NPAGDRLIIFSDFDLTCTIV 277 (563)
Q Consensus 258 ~~~~~~~~ii~DFD~TiT~~ 277 (563)
.....+.+|+||.||||++.
T Consensus 121 ~~~~~~kvIvFDLDgTLi~~ 140 (301)
T TIGR01684 121 KVFEPPHVVVFDLDSTLITD 140 (301)
T ss_pred cccccceEEEEecCCCCcCC
Confidence 34456779999999999975
No 256
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=32.94 E-value=4.4e+02 Score=28.05 Aligned_cols=138 Identities=13% Similarity=0.132 Sum_probs=71.0
Q ss_pred CCCHHHHHHHhccCCCCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCccc
Q 008499 373 GINLEDIKKAGERLSLQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEII 451 (563)
Q Consensus 373 Gi~~~~i~~~~~~i~lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~ 451 (563)
-++..++.++.+++.+..=-.+--+++++ ..+.||-.|=.+-.+-..|.. |++.+.++=.+..-..+...--+.
T Consensus 13 ~~~~~e~~ry~Rqi~l~~~g~~~q~~l~~-----~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~ 87 (370)
T PRK05600 13 QLPTSELRRTARQLALPGFGIEQQERLHN-----ARVLVIGAGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILF 87 (370)
T ss_pred CCCHHHHHHhhcccchhhhCHHHHHHhcC-----CcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccC
Confidence 34566666666665553212444455543 456676654234444444544 766555443332211111000011
Q ss_pred ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCCcC---chHHhhhcCccEEEc--CC----hhHHHHHHhhCCeee
Q 008499 452 EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDSVG---DLLCLLEADIGIVIG--SS----SSLRRVGSQFGVTFI 519 (563)
Q Consensus 452 ~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs~~---Dl~~l~~Ad~givi~--~~----~~L~~~~~~~gi~~~ 519 (563)
.....|..|...+.+.+.+.+. .-++..+-...+ ....+..+| +|+. ++ -.+-++|.+++++++
T Consensus 88 ~~~diG~~Ka~~~~~~l~~~np--~v~i~~~~~~i~~~~~~~~~~~~D--lVid~~Dn~~~r~~in~~~~~~~iP~v 160 (370)
T PRK05600 88 GASDVGRPKVEVAAERLKEIQP--DIRVNALRERLTAENAVELLNGVD--LVLDGSDSFATKFLVADAAEITGTPLV 160 (370)
T ss_pred ChhHCCCHHHHHHHHHHHHHCC--CCeeEEeeeecCHHHHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 1222356799888887776653 224444443333 234566688 5553 22 145688999999877
No 257
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=32.34 E-value=3.4e+02 Score=24.09 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=38.8
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcC---CcCchHHhhhcCccEEEcC--C----hhHHHHHHhhCCeeeecC
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD---SVGDLLCLLEADIGIVIGS--S----SSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGD---s~~Dl~~l~~Ad~givi~~--~----~~L~~~~~~~gi~~~p~~ 522 (563)
.|..|...+.+.+.+.+. .-++-.+-. +.++...+...| +++.. + ..+.++|++++++++--.
T Consensus 50 vG~~Ka~~~~~~l~~~~p--~v~i~~~~~~~~~~~~~~~~~~~d--iVi~~~d~~~~~~~l~~~~~~~~i~~i~~~ 121 (143)
T cd01483 50 IGKPKAEVAARRLNELNP--GVNVTAVPEGISEDNLDDFLDGVD--LVIDAIDNIAVRRALNRACKELGIPVIDAG 121 (143)
T ss_pred CCChHHHHHHHHHHHHCC--CcEEEEEeeecChhhHHHHhcCCC--EEEECCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 466899998888877652 223333322 223345666777 55532 2 247889999998877543
No 258
>PRK04358 hypothetical protein; Provisional
Probab=31.83 E-value=39 Score=33.00 Aligned_cols=40 Identities=30% Similarity=0.442 Sum_probs=34.7
Q ss_pred EcCCcCchHHhhhcCc--cEEEcCChhHHHHHHhhCCeeeec
Q 008499 482 IGDSVGDLLCLLEADI--GIVIGSSSSLRRVGSQFGVTFIPL 521 (563)
Q Consensus 482 iGDs~~Dl~~l~~Ad~--givi~~~~~L~~~~~~~gi~~~p~ 521 (563)
+=||.+|+..+..|-- |+++.++..+..+|++.||++++-
T Consensus 158 ~ldS~~DidvlaLA~ELda~lvTdD~giqn~A~~LGI~~~~~ 199 (217)
T PRK04358 158 ILDSAEDLDVLLLAKELDAAVVSADEGIRKWAERLGLRFVDA 199 (217)
T ss_pred cccchhhHHHHHHHHHhCCEEEeCCHHHHHHHHHcCCeeecH
Confidence 6799999999888732 788888889999999999999974
No 259
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=31.81 E-value=30 Score=32.31 Aligned_cols=21 Identities=19% Similarity=0.145 Sum_probs=16.0
Q ss_pred CCCCCCCeEEeeccccceecc
Q 008499 257 HNPAGDRLIIFSDFDLTCTIV 277 (563)
Q Consensus 257 ~~~~~~~~~ii~DFD~TiT~~ 277 (563)
..|+....++++|-||||+..
T Consensus 7 ~~~~~~~k~~~~D~Dgtl~~~ 27 (166)
T TIGR01664 7 DGPKPQSKVAAFDLDGTLITT 27 (166)
T ss_pred CCCCCcCcEEEEeCCCceEec
Confidence 346555677888999999964
No 260
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=31.58 E-value=4.3e+02 Score=24.65 Aligned_cols=59 Identities=14% Similarity=0.355 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh----cCccEEEcCChhHHHHHHhhCCeeeecCchhH
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE----ADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLV 526 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~----Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~ 526 (563)
...+.+++. -.-.+|.=++..|+..... -|+.+++|+. ...++|+++|++.+++.++.-
T Consensus 92 ~~~~~~ll~------~~i~~~~~~~~~e~~~~i~~~~~~G~~viVGg~-~~~~~A~~~gl~~v~i~sg~e 154 (176)
T PF06506_consen 92 LESIEELLG------VDIKIYPYDSEEEIEAAIKQAKAEGVDVIVGGG-VVCRLARKLGLPGVLIESGEE 154 (176)
T ss_dssp HHHHHHHHT-------EEEEEEESSHHHHHHHHHHHHHTT--EEEESH-HHHHHHHHTTSEEEESS--HH
T ss_pred HHHHHHHhC------CceEEEEECCHHHHHHHHHHHHHcCCcEEECCH-HHHHHHHHcCCcEEEEEecHH
Confidence 555666663 1345566688889877655 3677999855 578999999999999987443
No 261
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=31.46 E-value=1e+02 Score=31.01 Aligned_cols=53 Identities=15% Similarity=0.217 Sum_probs=40.0
Q ss_pred hcCccEEEcCChhHHHHHHhhCCeeeecCchhHHhHHhhhcCCCCccccccCeEEEeCCHHHHHHhH
Q 008499 494 EADIGIVIGSSSSLRRVGSQFGVTFIPLYPGLVKKQKEYTEGSSSNWKEKSGILYTVSSWAEVHAFI 560 (563)
Q Consensus 494 ~Ad~givi~~~~~L~~~~~~~gi~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~W~~i~~~~ 560 (563)
.|.++++..-+.+..+.|++.||+|+.|. .+.|...+...+.|++|.|....+
T Consensus 72 DATHPyAa~iS~Na~~aake~gipy~r~e--------------RP~~~~~gd~~~~V~d~~ea~~~~ 124 (257)
T COG2099 72 DATHPYAARISQNAARAAKETGIPYLRLE--------------RPPWAPNGDNWIEVADIEEAAEAA 124 (257)
T ss_pred ECCChHHHHHHHHHHHHHHHhCCcEEEEE--------------CCccccCCCceEEecCHHHHHHHH
Confidence 34445555445689999999999999996 456666655899999999987654
No 262
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=30.33 E-value=1.1e+02 Score=37.18 Aligned_cols=47 Identities=19% Similarity=0.272 Sum_probs=35.3
Q ss_pred CCCCCcHHHHHHHHHHhCCCCCccE-EEEcCCcC-chHHhhhcC-ccEEEc
Q 008499 455 ESPIDKVQAFNNTLEKYGTDRKNLS-VYIGDSVG-DLLCLLEAD-IGIVIG 502 (563)
Q Consensus 455 ~~g~~K~~~l~~~~~~~~~~~~~~v-iyiGDs~~-Dl~~l~~Ad-~givi~ 502 (563)
.-.-.|.++|+-+..+++.+. .++ |++|||-| |+..|+.-- .+|++.
T Consensus 952 P~~ASKgqAlRyL~~rwgi~l-~~v~VfaGdSGntD~e~Ll~G~~~tvi~~ 1001 (1050)
T TIGR02468 952 PLLASRSQALRYLFVRWGIEL-ANMAVFVGESGDTDYEGLLGGLHKTVILK 1001 (1050)
T ss_pred eCCCCHHHHHHHHHHHcCCCh-HHeEEEeccCCCCCHHHHhCCceeEEEEe
Confidence 345569999999999888864 555 67999999 988776433 377774
No 263
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=30.13 E-value=26 Score=32.14 Aligned_cols=14 Identities=21% Similarity=0.033 Sum_probs=11.9
Q ss_pred eEEeeccccceecc
Q 008499 264 LIIFSDFDLTCTIV 277 (563)
Q Consensus 264 ~~ii~DFD~TiT~~ 277 (563)
.+|++|.||||++.
T Consensus 2 ~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 2 RLLILDVDGVLTDG 15 (154)
T ss_pred eEEEEeCceeEEcC
Confidence 37899999999964
No 264
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=29.93 E-value=1.2e+02 Score=31.73 Aligned_cols=98 Identities=17% Similarity=0.245 Sum_probs=55.8
Q ss_pred cCCCCchHHHHHHHHHHcCCCCCcEEEEccc-cC-hHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCC-CCCCc
Q 008499 385 RLSLQDGCTTFFQKVVKNENLNANVHVLSYC-WC-GDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVE-SPIDK 460 (563)
Q Consensus 385 ~i~lrpG~~efl~~l~~~g~~~~~v~IvS~g-ws-~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~-~g~~K 460 (563)
.-..-||+..+++.+.+.|. .|++-||.+ |. .+.+.+.|.. +++.-.++=- .+ +|. ++.... .+..|
T Consensus 194 tr~~ipGV~~~yr~l~~~~~--apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~--~~-g~~----~~~i~~sga~rK 264 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGD--APVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLR--RW-GGV----LDNIIESGAARK 264 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCC--CCeEEecCChhHhHHHHHHHHhcCCCCCCchhHh--hc-CCc----ccccccchhhhc
Confidence 35778999999999987652 789999975 31 1223333322 2321111000 00 222 222222 23567
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCC-cCchHHhhh
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDS-VGDLLCLLE 494 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs-~~Dl~~l~~ 494 (563)
.+.++.++.++. ..+.|.|||| .-|++.-..
T Consensus 265 ~~~l~nil~~~p---~~kfvLVGDsGE~DpeIYae 296 (373)
T COG4850 265 GQSLRNILRRYP---DRKFVLVGDSGEHDPEIYAE 296 (373)
T ss_pred ccHHHHHHHhCC---CceEEEecCCCCcCHHHHHH
Confidence 788888887764 4689999996 667765433
No 265
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=29.35 E-value=79 Score=32.09 Aligned_cols=78 Identities=21% Similarity=0.421 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhCCCCCccEEEEcCCcCchHHhhh-cCccEEEcCCh----------------------------------
Q 008499 461 VQAFNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE-ADIGIVIGSSS---------------------------------- 505 (563)
Q Consensus 461 ~~~l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~-Ad~givi~~~~---------------------------------- 505 (563)
..+++++.+++ ++-+...|+..-|-.++.. || +++..+.
T Consensus 76 ~~af~kIkekR----pDIl~ia~~~~EDp~~i~~~aD--i~~~~D~~~~G~~i~~~Ak~mGAktFVh~sfprhms~~~l~ 149 (275)
T PF12683_consen 76 AEAFRKIKEKR----PDILLIAGEPHEDPEVISSAAD--IVVNPDEISRGYTIVWAAKKMGAKTFVHYSFPRHMSYELLA 149 (275)
T ss_dssp HHHHHHHHHH-----TTSEEEESS--S-HHHHHHHSS--EEEE--HHHHHHHHHHHHHHTT-S-EEEEEETTGGGSHHHH
T ss_pred HHHHHHHHhcC----CCeEEEcCCCcCCHHHHhhccC--eEeccchhhccHHHHHHHHHcCCceEEEEechhhcchHHHH
Confidence 35777887764 3566788887878777665 67 4454331
Q ss_pred ----hHHHHHHhhCCeeeec------Cc-hhHHhHHhhhcCCCCccccccC
Q 008499 506 ----SLRRVGSQFGVTFIPL------YP-GLVKKQKEYTEGSSSNWKEKSG 545 (563)
Q Consensus 506 ----~L~~~~~~~gi~~~p~------~~-~~~~~~~~~~~~~~~~~~~~~~ 545 (563)
.+++.|+..|++|+-. +. |..+. ++|..+.-+.|.+.-|
T Consensus 150 ~Rr~~M~~~C~~lGi~fv~~taPDP~sd~gv~ga-qqfIlE~vp~~i~kYG 199 (275)
T PF12683_consen 150 RRRDIMEEACKDLGIKFVEVTAPDPTSDVGVAGA-QQFILEDVPKWIKKYG 199 (275)
T ss_dssp HHHHHHHHHHHHCT--EEEEEE---SSTCHHHHH-HHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcHHH-HHHHHHHHHHHHHHhC
Confidence 3888999999999944 32 44444 4676666777777555
No 266
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=28.23 E-value=6.7e+02 Score=26.43 Aligned_cols=109 Identities=11% Similarity=0.096 Sum_probs=58.7
Q ss_pred CcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcC-
Q 008499 407 ANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD- 484 (563)
Q Consensus 407 ~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGD- 484 (563)
..+.||=.|=.+-.+-..|.. |++.+.++=.+..-..+...--+......|..|+..+.+.+.+.+. .-++..+-.
T Consensus 29 ~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np--~v~v~~~~~~ 106 (355)
T PRK05597 29 AKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP--DVKVTVSVRR 106 (355)
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCC--CcEEEEEEee
Confidence 456676654224444444554 7776665554432221110000111223466899888888776653 223333322
Q ss_pred --CcCchHHhhhcCccEEEcC--C----hhHHHHHHhhCCeee
Q 008499 485 --SVGDLLCLLEADIGIVIGS--S----SSLRRVGSQFGVTFI 519 (563)
Q Consensus 485 --s~~Dl~~l~~Ad~givi~~--~----~~L~~~~~~~gi~~~ 519 (563)
..++...+..+| +|+.. + ..+-+.|.+.+++++
T Consensus 107 i~~~~~~~~~~~~D--vVvd~~d~~~~r~~~n~~c~~~~ip~v 147 (355)
T PRK05597 107 LTWSNALDELRDAD--VILDGSDNFDTRHLASWAAARLGIPHV 147 (355)
T ss_pred cCHHHHHHHHhCCC--EEEECCCCHHHHHHHHHHHHHcCCCEE
Confidence 233456677788 55542 2 147788999999887
No 267
>PRK15052 D-tagatose-1,6-bisphosphate aldolase subunit GatZ; Provisional
Probab=27.50 E-value=1.1e+02 Score=32.90 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCCCCcEEEEccc-cChHhhHHHHhC----CCC-cceEEeeccEecCccccCcccccCCCCCCcHHHHHH
Q 008499 393 TTFFQKVVKNENLNANVHVLSYC-WCGDLIRASFSS----GLN-ALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNN 466 (563)
Q Consensus 393 ~efl~~l~~~g~~~~~v~IvS~g-ws~~~I~~~L~~----~l~-~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~ 466 (563)
.++++..+. | .++.|-|+| -+..+|+..|+. +.+ -+.--||...-++| |||- +..+=.+.+.+
T Consensus 2 ~~~~~~~~~-g---~~~Gi~SVCsahp~VieAAl~~a~~~~~pvLiEAT~NQVdq~GG-YTGm------tP~dF~~~V~~ 70 (421)
T PRK15052 2 KTLIARHKA-G---EHIGICSVCSAHPLVIEAALAFDLNSTRKVLIEATSNQVNQFGG-YTGM------TPADFREFVYG 70 (421)
T ss_pred hhHHHhhhc-C---CCCceeeECCCCHHHHHHHHHHHhhcCCcEEEEeccccccccCC-cCCC------CHHHHHHHHHH
Confidence 345555554 3 466677765 247788887775 222 13455777766544 4772 33334466677
Q ss_pred HHHHhCCCCCccEEEEcCCcCc
Q 008499 467 TLEKYGTDRKNLSVYIGDSVGD 488 (563)
Q Consensus 467 ~~~~~~~~~~~~viyiGDs~~D 488 (563)
+..+.+.+ .+++|.-||..+=
T Consensus 71 iA~~~gf~-~~~iiLggDHlGP 91 (421)
T PRK15052 71 IADKVGFP-RERIILGGDHLGP 91 (421)
T ss_pred HHHHcCCC-hhcEEeecCCCCC
Confidence 77776653 3589999998764
No 268
>PRK15174 Vi polysaccharide export protein VexE; Provisional
Probab=27.47 E-value=2.7e+02 Score=32.14 Aligned_cols=118 Identities=16% Similarity=0.099 Sum_probs=55.2
Q ss_pred HHHHHHHHHcCCCCCcEEEEcc---ccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCC-C-CCcHHHHHH
Q 008499 393 TTFFQKVVKNENLNANVHVLSY---CWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVES-P-IDKVQAFNN 466 (563)
Q Consensus 393 ~efl~~l~~~g~~~~~v~IvS~---gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~-g-~~K~~~l~~ 466 (563)
.+.++.+.+.| -++++||+ || ++.-.++.. +.+ +.++-..+.. ..+.+..++.. . ..+...+++
T Consensus 468 ~~~l~~a~~~~---kgvi~~t~H~gnw--E~~~~~~~~~~~~-~~~i~r~~~~----~R~~~g~~~i~~~~~~~~~~~r~ 537 (656)
T PRK15174 468 EQFFQRLQLDQ---RGCIIVSAHLGAM--YAGPMILSLLEMN-SKWVASTPGV----LKGGYGERLISVSDKSEADVVRA 537 (656)
T ss_pred HHHHHHHHhcC---CCEEEEecCcchh--hHHHHHHHHcCCC-ceeeecchHH----HHHhcCCceeccCCCCcchHHHH
Confidence 44455566566 68999986 56 454444443 322 2222222221 11122122221 1 122233344
Q ss_pred HHHHhCCCCCccEEEEcCCcCchHHhhhcCc-cEEEcCChhHHHHHHhhCCeeeecCc
Q 008499 467 TLEKYGTDRKNLSVYIGDSVGDLLCLLEADI-GIVIGSSSSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 467 ~~~~~~~~~~~~viyiGDs~~Dl~~l~~Ad~-givi~~~~~L~~~~~~~gi~~~p~~~ 523 (563)
+.+... .+..+.+.+|-...-. -..++. |.-..-......++.+.|.+++|+..
T Consensus 538 i~~aLk--~g~~v~il~Dq~~~~~-~~~v~FfG~~a~~~~g~~~lA~~~~~pvv~~~~ 592 (656)
T PRK15174 538 CMQTLH--SGQSLVVAIDGALNLS-APTIDFFGQQITYSTFCSRLAWKMHLPTVFSVP 592 (656)
T ss_pred HHHHHH--cCCeEEEEeCCCCCCC-CceeccCCCccCcCcHHHHHHHHHCCCEEEeEE
Confidence 443322 1356778988873211 111221 11111223567888999999998863
No 269
>COG0794 GutQ Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane]
Probab=27.10 E-value=1e+02 Score=29.98 Aligned_cols=48 Identities=23% Similarity=0.395 Sum_probs=39.0
Q ss_pred CccEEEEcCC---cCchHHhhhcCccEEEcCC------hhHHHHHHhhCCeeeecCc
Q 008499 476 KNLSVYIGDS---VGDLLCLLEADIGIVIGSS------SSLRRVGSQFGVTFIPLYP 523 (563)
Q Consensus 476 ~~~viyiGDs---~~Dl~~l~~Ad~givi~~~------~~L~~~~~~~gi~~~p~~~ 523 (563)
+.+++++|=+ .+|++|+..=|+=|++..+ -.+.+++++.|++++-++.
T Consensus 65 G~~a~fv~p~ea~hgdlg~i~~~DvviaiS~SGeT~el~~~~~~aK~~g~~liaiT~ 121 (202)
T COG0794 65 GTPAFFVGPAEALHGDLGMITPGDVVIAISGSGETKELLNLAPKAKRLGAKLIAITS 121 (202)
T ss_pred CCceEEecCchhccCCccCCCCCCEEEEEeCCCcHHHHHHHHHHHHHcCCcEEEEeC
Confidence 4689999944 8999999999976666433 2689999999999998875
No 270
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.86 E-value=3.3e+02 Score=25.60 Aligned_cols=28 Identities=21% Similarity=0.186 Sum_probs=21.6
Q ss_pred CCccEEEEcCC-cCchHHhhhcCc-cEEEc
Q 008499 475 RKNLSVYIGDS-VGDLLCLLEADI-GIVIG 502 (563)
Q Consensus 475 ~~~~viyiGDs-~~Dl~~l~~Ad~-givi~ 502 (563)
.+.+++.|||= .||+.+....+. +|.+.
T Consensus 135 ~p~eiavIGDrl~TDVl~gN~~G~~tilv~ 164 (168)
T PF09419_consen 135 SPSEIAVIGDRLFTDVLMGNRMGSYTILVT 164 (168)
T ss_pred CchhEEEEcchHHHHHHHhhccCceEEEEe
Confidence 35789999997 489988888884 66654
No 271
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=26.69 E-value=1.2e+02 Score=29.87 Aligned_cols=48 Identities=13% Similarity=0.097 Sum_probs=31.9
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeecc
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEF 439 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l 439 (563)
+.+...+.+++++++| +.++|.|+. +...+...+.. ++..--|.+|-.
T Consensus 17 i~~~~~~~i~~l~~~G---~~~~iaTGR-~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 17 ISPSTKEALAKLREKG---IKVVLATGR-PYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred cCHHHHHHHHHHHHCC---CeEEEEeCC-CHHHHHHHHHHcCCCCCEEEcCCc
Confidence 3445567788899988 999999997 45566666665 543223444543
No 272
>PRK10444 UMP phosphatase; Provisional
Probab=25.57 E-value=78 Score=31.63 Aligned_cols=26 Identities=12% Similarity=0.317 Sum_probs=23.4
Q ss_pred CCCchHHHHHHHHHHcCCCCCcEEEEccc
Q 008499 387 SLQDGCTTFFQKVVKNENLNANVHVLSYC 415 (563)
Q Consensus 387 ~lrpG~~efl~~l~~~g~~~~~v~IvS~g 415 (563)
.+-||..++++.++++| .+++++|.+
T Consensus 17 ~~~p~a~~~l~~L~~~g---~~~~~~Tn~ 42 (248)
T PRK10444 17 VAVPGAAEFLHRILDKG---LPLVLLTNY 42 (248)
T ss_pred eeCccHHHHHHHHHHCC---CeEEEEeCC
Confidence 45789999999999999 999999987
No 273
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=25.43 E-value=34 Score=35.28 Aligned_cols=17 Identities=24% Similarity=0.065 Sum_probs=14.3
Q ss_pred CCCeEEeeccccceecc
Q 008499 261 GDRLIIFSDFDLTCTIV 277 (563)
Q Consensus 261 ~~~~~ii~DFD~TiT~~ 277 (563)
+.+.+|+||.||||++.
T Consensus 126 ~~~~~i~~D~D~TL~~~ 142 (303)
T PHA03398 126 EIPHVIVFDLDSTLITD 142 (303)
T ss_pred eeccEEEEecCCCccCC
Confidence 45679999999999875
No 274
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=25.26 E-value=1.3e+02 Score=28.86 Aligned_cols=48 Identities=17% Similarity=0.044 Sum_probs=31.0
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeecc
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEF 439 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l 439 (563)
+.|+..+.++.++++| ++++|.|+-. ...++.++.. ++..--|.+|--
T Consensus 19 i~~~~~~~i~~l~~~g---~~~~~~TGR~-~~~~~~~~~~l~~~~~~i~~NGa 67 (215)
T TIGR01487 19 ISERAIEAIRKAEKKG---IPVSLVTGNT-VPFARALAVLIGTSGPVVAENGG 67 (215)
T ss_pred cCHHHHHHHHHHHHCC---CEEEEEcCCc-chhHHHHHHHhCCCCcEEEccCc
Confidence 3445566788888888 9999999873 5556666554 443233555543
No 275
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=25.26 E-value=1.4e+02 Score=28.57 Aligned_cols=44 Identities=9% Similarity=0.081 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcc-eEEeecc
Q 008499 392 CTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNAL-NVHANEF 439 (563)
Q Consensus 392 ~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~-~I~aN~l 439 (563)
..+.++.++++| ++++|+|+. +...+..+++. ++... -|-+|--
T Consensus 21 ~~~~l~~l~~~g---i~~~i~TgR-~~~~~~~~~~~l~~~~~~~I~~NGa 66 (221)
T TIGR02463 21 AAPWLTRLQEAG---IPVILCTSK-TAAEVEYLQKALGLTGDPYIAENGA 66 (221)
T ss_pred HHHHHHHHHHCC---CeEEEEcCC-CHHHHHHHHHHcCCCCCcEEEeCCc
Confidence 356788888888 999999998 67778887776 65422 3344443
No 276
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=24.59 E-value=5.9e+02 Score=26.12 Aligned_cols=110 Identities=12% Similarity=0.111 Sum_probs=56.4
Q ss_pred CcEEEEccc-cChHhhHHHHhCCCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCC
Q 008499 407 ANVHVLSYC-WCGDLIRASFSSGLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS 485 (563)
Q Consensus 407 ~~v~IvS~g-ws~~~I~~~L~~~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs 485 (563)
..+.|+-.| .-.++.......|+..+.|+=++..-..+...--+..+.-.|..|..+..+.+.+.+. .-++-.+ ++
T Consensus 20 s~VLIvG~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp--~V~V~~~-~~ 96 (286)
T cd01491 20 SNVLISGLGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNP--YVPVTVS-TG 96 (286)
T ss_pred CcEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCC--CCEEEEE-ec
Confidence 345555443 2233333332237766666655543222211111112222345688877777776653 2233333 33
Q ss_pred cCchHHhhhcCccEEEc-CC-----hhHHHHHHhhCCeeeec
Q 008499 486 VGDLLCLLEADIGIVIG-SS-----SSLRRVGSQFGVTFIPL 521 (563)
Q Consensus 486 ~~Dl~~l~~Ad~givi~-~~-----~~L~~~~~~~gi~~~p~ 521 (563)
..|-.-+...| +++. .. -.+-++|++++++|+--
T Consensus 97 ~~~~~~l~~fd--vVV~~~~~~~~~~~in~~c~~~~ipfI~a 136 (286)
T cd01491 97 PLTTDELLKFQ--VVVLTDASLEDQLKINEFCHSPGIKFISA 136 (286)
T ss_pred cCCHHHHhcCC--EEEEecCCHHHHHHHHHHHHHcCCEEEEE
Confidence 34556677788 4443 22 24778999999988854
No 277
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=24.28 E-value=4.5e+02 Score=26.04 Aligned_cols=110 Identities=14% Similarity=0.118 Sum_probs=57.2
Q ss_pred CcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcCC
Q 008499 407 ANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGDS 485 (563)
Q Consensus 407 ~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGDs 485 (563)
..+.|+=.|=.+-.+-..|.. |++.+.++=.+..-..+...--+....-.|..|+..+.+.+.+.+. .-++..+-..
T Consensus 25 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp--~v~i~~~~~~ 102 (240)
T TIGR02355 25 SRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINP--HIAINPINAK 102 (240)
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCC--CcEEEEEecc
Confidence 456666544234444455554 7765555433322111111000111123456799888888877653 2334444333
Q ss_pred c---CchHHhhhcCccEEEc--CC----hhHHHHHHhhCCeeee
Q 008499 486 V---GDLLCLLEADIGIVIG--SS----SSLRRVGSQFGVTFIP 520 (563)
Q Consensus 486 ~---~Dl~~l~~Ad~givi~--~~----~~L~~~~~~~gi~~~p 520 (563)
. ++...+..+| +++. ++ ..|-++|.+.+++++-
T Consensus 103 i~~~~~~~~~~~~D--lVvd~~D~~~~r~~ln~~~~~~~ip~v~ 144 (240)
T TIGR02355 103 LDDAELAALIAEHD--IVVDCTDNVEVRNQLNRQCFAAKVPLVS 144 (240)
T ss_pred CCHHHHHHHhhcCC--EEEEcCCCHHHHHHHHHHHHHcCCCEEE
Confidence 2 2334566678 5553 22 2477899999998873
No 278
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=24.01 E-value=1.2e+02 Score=30.21 Aligned_cols=37 Identities=11% Similarity=0.174 Sum_probs=27.1
Q ss_pred chHHHHHHHHHHcCCCCCcEEEEccc--cChHhhHHHHhC-CC
Q 008499 390 DGCTTFFQKVVKNENLNANVHVLSYC--WCGDLIRASFSS-GL 429 (563)
Q Consensus 390 pG~~efl~~l~~~g~~~~~v~IvS~g--ws~~~I~~~L~~-~l 429 (563)
||..++++.++++| .+++++|.| .+..-+...|+. |+
T Consensus 20 ~~a~~~l~~l~~~g---~~~~~~Tnn~~r~~~~~~~~l~~~g~ 59 (249)
T TIGR01457 20 PEAETFVHELQKRD---IPYLFVTNNSTRTPESVAEMLASFDI 59 (249)
T ss_pred cCHHHHHHHHHHCC---CeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57789999999998 999999974 344555555555 54
No 279
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=23.43 E-value=1.4e+02 Score=29.13 Aligned_cols=46 Identities=7% Similarity=-0.095 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeeccE
Q 008499 391 GCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFS 440 (563)
Q Consensus 391 G~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~ 440 (563)
+..+.++.++++| +++++.|+- +..-+...+.. ++..--|.+|--.
T Consensus 19 ~~~~ai~~l~~~G---~~~vi~TgR-~~~~~~~~~~~lg~~~~~I~~NGa~ 65 (225)
T TIGR02461 19 PAREALEELKDLG---FPIVFVSSK-TRAEQEYYREELGVEPPFIVENGGA 65 (225)
T ss_pred HHHHHHHHHHHCC---CEEEEEeCC-CHHHHHHHHHHcCCCCcEEEcCCcE
Confidence 3467888889888 999999986 55556666655 6533345555443
No 280
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=23.19 E-value=29 Score=32.65 Aligned_cols=19 Identities=26% Similarity=-0.066 Sum_probs=15.8
Q ss_pred CCeEEeeccccceecccch
Q 008499 262 DRLIIFSDFDLTCTIVDSS 280 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~Dt~ 280 (563)
..+.++.|.|||||..+|.
T Consensus 5 ~~~~~ciDIDGtit~~~t~ 23 (194)
T COG5663 5 FQLRCCIDIDGTITDDPTF 23 (194)
T ss_pred hHhheeeccCCceecCccc
Confidence 4567899999999998874
No 281
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=22.95 E-value=6.5e+02 Score=25.57 Aligned_cols=108 Identities=10% Similarity=0.147 Sum_probs=57.3
Q ss_pred CcEEEEccccChHhhHHHHhC-CCCcceEEeeccEecCccccCccc-ccCCCCCCcHHHHHHHHHHhCCCCCccEEEEcC
Q 008499 407 ANVHVLSYCWCGDLIRASFSS-GLNALNVHANEFSFKESISTGEII-EKVESPIDKVQAFNNTLEKYGTDRKNLSVYIGD 484 (563)
Q Consensus 407 ~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l~~~~g~~tG~~~-~~~~~g~~K~~~l~~~~~~~~~~~~~~viyiGD 484 (563)
..+.||-.|=.+-.+-..|.. |++.+.|+=.+..-..+. .-.+. .....|..|+.++.+.+...+. ..++..+=+
T Consensus 31 s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNl-nRQ~~~~~~~vG~~Kve~~~~rl~~INP--~~~V~~i~~ 107 (268)
T PRK15116 31 AHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNT-NRQIHALRDNVGLAKAEVMAERIRQINP--ECRVTVVDD 107 (268)
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEeccccc-ccccccChhhcChHHHHHHHHHHHhHCC--CcEEEEEec
Confidence 457777665345555555655 766555443332221111 00110 1123456799998888876653 235555533
Q ss_pred CcC--chHHhh--hcCccEEEcCC------hhHHHHHHhhCCeee
Q 008499 485 SVG--DLLCLL--EADIGIVIGSS------SSLRRVGSQFGVTFI 519 (563)
Q Consensus 485 s~~--Dl~~l~--~Ad~givi~~~------~~L~~~~~~~gi~~~ 519 (563)
..+ +...+. ..| +||.+- ..|.++|++++++++
T Consensus 108 ~i~~e~~~~ll~~~~D--~VIdaiD~~~~k~~L~~~c~~~~ip~I 150 (268)
T PRK15116 108 FITPDNVAEYMSAGFS--YVIDAIDSVRPKAALIAYCRRNKIPLV 150 (268)
T ss_pred ccChhhHHHHhcCCCC--EEEEcCCCHHHHHHHHHHHHHcCCCEE
Confidence 322 222232 366 455322 258899999999998
No 282
>PRK15458 tagatose 6-phosphate aldolase subunit KbaZ; Provisional
Probab=22.77 E-value=1.8e+02 Score=31.47 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=51.2
Q ss_pred HHHHHHHHcCCCCCcEEEEccc-cChHhhHHHHhC----CCC-cceEEeeccEecCccccCcccccCCCCCCcHHHHHHH
Q 008499 394 TFFQKVVKNENLNANVHVLSYC-WCGDLIRASFSS----GLN-ALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNT 467 (563)
Q Consensus 394 efl~~l~~~g~~~~~v~IvS~g-ws~~~I~~~L~~----~l~-~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~ 467 (563)
++++..+. | .++.|.|+| -+..+|+..|+. +.+ -+.--||...-++| |||- +..+=...+.++
T Consensus 6 ~~~~~~k~-g---~~~gI~sVCsahp~VieAAl~~a~~~~~pvLiEAT~NQVnq~GG-YTGm------tP~dF~~~V~~i 74 (426)
T PRK15458 6 EMVQQHKA-G---KTNGIYAVCSAHPLVLEAAIRYALANDSPLLIEATSNQVDQFGG-YTGM------TPADFRGFVCQL 74 (426)
T ss_pred HHHHhhcc-C---CCceEEEecCCCHHHHHHHHHHHhhcCCcEEEEeccccccccCC-cCCC------CHHHHHHHHHHH
Confidence 45555443 3 466677765 246788887775 222 13456787766544 4772 333444667777
Q ss_pred HHHhCCCCCccEEEEcCCcCc
Q 008499 468 LEKYGTDRKNLSVYIGDSVGD 488 (563)
Q Consensus 468 ~~~~~~~~~~~viyiGDs~~D 488 (563)
..+.+.+ .+++|.-||..+=
T Consensus 75 A~~~gf~-~~~iiLGGDHLGP 94 (426)
T PRK15458 75 ADSLNFP-QEALILGGDHLGP 94 (426)
T ss_pred HHHcCCC-hhhEEeecCCCCC
Confidence 7776663 3589999998875
No 283
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=22.65 E-value=4.4e+02 Score=25.95 Aligned_cols=45 Identities=9% Similarity=0.019 Sum_probs=29.8
Q ss_pred CchHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEee
Q 008499 389 QDGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHAN 437 (563)
Q Consensus 389 rpG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN 437 (563)
.+...+.++.++++| ++++|.|+. +-..+..++.. ++...-|-+|
T Consensus 22 ~~~~~~al~~~~~~g---~~v~iaTGR-~~~~~~~~~~~l~~~~~~I~~N 67 (264)
T COG0561 22 SPETKEALARLREKG---VKVVLATGR-PLPDVLSILEELGLDGPLITFN 67 (264)
T ss_pred CHHHHHHHHHHHHCC---CEEEEECCC-ChHHHHHHHHHcCCCccEEEeC
Confidence 334456777888889 999999987 45566666665 5544233344
No 284
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=22.60 E-value=97 Score=31.02 Aligned_cols=25 Identities=8% Similarity=0.138 Sum_probs=22.1
Q ss_pred CCchHHHHHHHHHHcCCCCCcEEEEccc
Q 008499 388 LQDGCTTFFQKVVKNENLNANVHVLSYC 415 (563)
Q Consensus 388 lrpG~~efl~~l~~~g~~~~~v~IvS~g 415 (563)
+-||..++++.++++| ++++++|++
T Consensus 22 ~~~~a~~al~~l~~~G---~~~~~~Tn~ 46 (257)
T TIGR01458 22 AVPGSQEAVKRLRGAS---VKVRFVTNT 46 (257)
T ss_pred cCCCHHHHHHHHHHCC---CeEEEEECC
Confidence 5678899999999998 999999986
No 285
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=22.49 E-value=48 Score=31.05 Aligned_cols=16 Identities=25% Similarity=0.131 Sum_probs=12.9
Q ss_pred CCeEEeeccccceecc
Q 008499 262 DRLIIFSDFDLTCTIV 277 (563)
Q Consensus 262 ~~~~ii~DFD~TiT~~ 277 (563)
+..+++||.||||+..
T Consensus 2 ~~~~~~~d~~~t~~~~ 17 (181)
T PRK08942 2 SMKAIFLDRDGVINVD 17 (181)
T ss_pred CccEEEEECCCCcccC
Confidence 4568999999999653
No 286
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.24 E-value=3.9e+02 Score=22.24 Aligned_cols=60 Identities=25% Similarity=0.398 Sum_probs=40.0
Q ss_pred CcHHHHHHHHHHhCCCCCccEEEE----cCCcCc--hH-HhhhcCccEEEcCC------hhHHHHHHhhCCeeeecC
Q 008499 459 DKVQAFNNTLEKYGTDRKNLSVYI----GDSVGD--LL-CLLEADIGIVIGSS------SSLRRVGSQFGVTFIPLY 522 (563)
Q Consensus 459 ~K~~~l~~~~~~~~~~~~~~viyi----GDs~~D--l~-~l~~Ad~givi~~~------~~L~~~~~~~gi~~~p~~ 522 (563)
+....++++++++|. ..+.. |+..+. ++ .+..||+=|++-+- ..+++.|+++|+|++...
T Consensus 10 ~~~~~~~~~~~~~G~----~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 10 DRERRYKRILEKYGG----KLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred ccHHHHHHHHHHcCC----EEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEEC
Confidence 456677888887653 44444 666666 44 45568954444221 368999999999999887
No 287
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=22.08 E-value=1.7e+02 Score=29.28 Aligned_cols=46 Identities=9% Similarity=0.003 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHcCCCCCcEEEEccccChHhhHHHHhC-CCCcceEEeecc
Q 008499 390 DGCTTFFQKVVKNENLNANVHVLSYCWCGDLIRASFSS-GLNALNVHANEF 439 (563)
Q Consensus 390 pG~~efl~~l~~~g~~~~~v~IvS~gws~~~I~~~L~~-~l~~~~I~aN~l 439 (563)
++..+.++.++++| ++++|+|+- +...+...+.. ++..-.|..|--
T Consensus 24 ~~~~~ai~~l~~~G---i~~~iaTgR-~~~~~~~~~~~l~l~~~~i~~nGa 70 (273)
T PRK00192 24 EPAKPALKALKEKG---IPVIPCTSK-TAAEVEVLRKELGLEDPFIVENGA 70 (273)
T ss_pred HHHHHHHHHHHHCC---CEEEEEcCC-CHHHHHHHHHHcCCCCCEEEEcCc
Confidence 44567788889888 999999987 45566666665 554334445543
No 288
>PRK13689 hypothetical protein; Provisional
Probab=22.00 E-value=2.7e+02 Score=22.49 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=33.6
Q ss_pred ccCChhHHHHHHHHHHHHHHhhcc-------------------CCHHHHHHHHHHHHHHHHH
Q 008499 193 NYSSESFQASALQNEDLLDKLSVS-------------------LTGEELDIIEKLYHQAMKL 235 (563)
Q Consensus 193 ~y~s~~f~~~v~~l~~~ld~~~~~-------------------~~~~~~~~~~~~f~~~~~l 235 (563)
-|+++.++.....+...|++.-+. ..+++|+.+.+.|.+++.-
T Consensus 6 KYsd~qvE~il~el~~VLeKH~Ap~DLSLMvLGN~vTnlln~~V~~~qR~~iAe~Fa~AL~~ 67 (75)
T PRK13689 6 KYSDEQVEQLLAELLAVLEKHKAPTDLSLMVLGNMVTNLLNTSVAPAQRQAIAESFARALQS 67 (75)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence 588888889889998888875322 2468899999999988753
No 289
>TIGR02810 agaZ_gatZ D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit. Aldolases specific for D-tagatose-bisphosphate occur in distinct pathways in Escherichia coli and other bacteria, one for the degradation of galactitol (formerly dulcitol) and one for degradation of N-acetyl-galactosamine and D-galactosamine. This family represents a protein of both systems that behaves as a non-catalytic subunit of D-tagatose-bisphosphate aldolase, required both for full activity and for good stability of the aldolase. Note that members of this protein family appear in public databases annotated as putative tagatose 6-phosphate kinases, possibly in error.
Probab=22.00 E-value=1.8e+02 Score=31.50 Aligned_cols=74 Identities=18% Similarity=0.252 Sum_probs=46.5
Q ss_pred CcEEEEccc-cChHhhHHHHhC----CCC-cceEEeeccEecCccccCcccccCCCCCCcHHHHHHHHHHhCCCCCccEE
Q 008499 407 ANVHVLSYC-WCGDLIRASFSS----GLN-ALNVHANEFSFKESISTGEIIEKVESPIDKVQAFNNTLEKYGTDRKNLSV 480 (563)
Q Consensus 407 ~~v~IvS~g-ws~~~I~~~L~~----~l~-~~~I~aN~l~~~~g~~tG~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~vi 480 (563)
.++.|.|+| -+..+|+..|+. +.+ -+.--||...-++| |||- +..+=...+.++..+.+.+ .+++|
T Consensus 11 ~~~gI~sVCsahp~VieAAl~~a~~~~~pvLiEAT~NQVnq~GG-YTGm------tP~dF~~~V~~iA~~~gf~-~~~ii 82 (420)
T TIGR02810 11 EPRGIYSVCSAHPLVLEAAIRRARASGTPVLIEATSNQVNQFGG-YTGM------TPADFRDFVETIADRIGFP-RDRLI 82 (420)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhhcCCcEEEEeccccccccCC-cCCC------CHHHHHHHHHHHHHHcCCC-hhcEE
Confidence 566677765 247788887775 222 13455777766544 4772 3333446667777776653 35899
Q ss_pred EEcCCcCc
Q 008499 481 YIGDSVGD 488 (563)
Q Consensus 481 yiGDs~~D 488 (563)
.-||..+=
T Consensus 83 LggDHlGP 90 (420)
T TIGR02810 83 LGGDHLGP 90 (420)
T ss_pred eecCCCCC
Confidence 99998774
No 290
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=21.64 E-value=48 Score=30.92 Aligned_cols=14 Identities=21% Similarity=0.036 Sum_probs=12.6
Q ss_pred eEEeeccccceecc
Q 008499 264 LIIFSDFDLTCTIV 277 (563)
Q Consensus 264 ~~ii~DFD~TiT~~ 277 (563)
.++|+|.|||+|+.
T Consensus 9 kLli~DVDGvLTDG 22 (170)
T COG1778 9 KLLILDVDGVLTDG 22 (170)
T ss_pred eEEEEeccceeecC
Confidence 48999999999985
No 291
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=21.52 E-value=58 Score=32.04 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=35.7
Q ss_pred CCCCcHHHHHHHHHHhCCCCCccEEEEcC----CcCchHHhhhcCc-cEEEcCChhHHHHHH
Q 008499 456 SPIDKVQAFNNTLEKYGTDRKNLSVYIGD----SVGDLLCLLEADI-GIVIGSSSSLRRVGS 512 (563)
Q Consensus 456 ~g~~K~~~l~~~~~~~~~~~~~~viyiGD----s~~Dl~~l~~Ad~-givi~~~~~L~~~~~ 512 (563)
.|.||.-.|+.+... ....++|+|| |=||.+....+++ |+-+.+.....+.|+
T Consensus 159 ~GwDKty~Lr~l~~~----~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~DT~~~l~ 216 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE----GFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPEDTIKQLK 216 (220)
T ss_dssp TT-SGGGGGGGTTTT----T-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHHHHHHHH
T ss_pred CCccHHHHHHHHHhc----ccceEEEEehhccCCCCCceeeecCCccEEEeCCHHHHHHHHH
Confidence 467887777766542 1468999999 6799999998876 888875544444544
No 292
>PF02609 Exonuc_VII_S: Exonuclease VII small subunit; InterPro: IPR003761 Exonuclease VII is composed of two non-identical subunits; one large subunit and 4 small ones []. This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield nucleoside 5'-phosphates.; GO: 0008855 exodeoxyribonuclease VII activity, 0006308 DNA catabolic process, 0009318 exodeoxyribonuclease VII complex; PDB: 1VP7_F.
Probab=21.30 E-value=2.1e+02 Score=21.28 Aligned_cols=35 Identities=31% Similarity=0.466 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Q 008499 199 FQASALQNEDLLDKLSVSLTGEELDIIEKLYHQAMKL 235 (563)
Q Consensus 199 f~~~v~~l~~~ld~~~~~~~~~~~~~~~~~f~~~~~l 235 (563)
|.+....+.++++++-. ++-.++...+.|.+++.+
T Consensus 1 fEe~~~~Le~Iv~~Le~--~~~sLdes~~lyeeg~~l 35 (53)
T PF02609_consen 1 FEEAMERLEEIVEKLES--GELSLDESLKLYEEGMEL 35 (53)
T ss_dssp HHHHHHHHHHHHHHHHT--T-S-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHH
Confidence 67788899999999864 334677888899888865
No 293
>PF05974 DUF892: Domain of unknown function (DUF892); InterPro: IPR010287 This domain is found in several hypothetical bacterial proteins of unknown function.; PDB: 4ERU_B 3OGH_A 2GS4_B 2GYQ_B 3HIU_A.
Probab=20.96 E-value=6.6e+02 Score=23.13 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=49.6
Q ss_pred HHHHhhHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCChhHHHHHHHHHHHh
Q 008499 52 HYIAQDFHFLK-AFSQAYELAEECADDDDAKLSISELRKGVLEELKMHDSFVKEWGTDLAKMATVNSATVKYTEFLLATA 130 (563)
Q Consensus 52 ~Yl~QD~~yl~-~f~r~~~~~~~~a~~~~~~~~l~~~~~~i~~E~~~h~~~~~~~gi~~~~~~~~~p~~~~Y~~fl~~~a 130 (563)
.+-.||.++.. .+.+++...+.++.+++.+..|..-+....+-.+.-+..++.+|.++.. .+.++...-..-.....
T Consensus 7 ~~~L~d~y~aE~q~~~~l~~~~~~a~~~~L~~~l~~h~~eT~~q~~rLe~~~~~lg~~p~~--~~c~~~~gl~~e~~~~~ 84 (159)
T PF05974_consen 7 IDELRDLYSAEKQLLKALPKLAEAASSPELKAALEEHLEETEQQIERLEQIFEALGADPSA--EKCDAMEGLVAEAQELI 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-S-C--HH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCcc--CcchHHHHHHHHHHHHH
Confidence 34456777755 8889999999999998877777666665555566666788889988762 33455555554444333
No 294
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=20.73 E-value=38 Score=26.39 Aligned_cols=26 Identities=23% Similarity=0.494 Sum_probs=15.3
Q ss_pred HHHHHHHhCCCCCccEEEEcCCcCchHHhhh
Q 008499 464 FNNTLEKYGTDRKNLSVYIGDSVGDLLCLLE 494 (563)
Q Consensus 464 l~~~~~~~~~~~~~~viyiGDs~~Dl~~l~~ 494 (563)
++++++++ ..+||+||=..|+.++..
T Consensus 7 VqQLLK~f-----G~~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 7 VQQLLKKF-----GIIIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHTT-----S-----S-HHHHHHHHHH
T ss_pred HHHHHHHC-----CEEEEeCChHHHHHHHHH
Confidence 45677754 468999999999999875
No 295
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=20.72 E-value=54 Score=30.63 Aligned_cols=13 Identities=46% Similarity=0.353 Sum_probs=11.2
Q ss_pred eEEeeccccceec
Q 008499 264 LIIFSDFDLTCTI 276 (563)
Q Consensus 264 ~~ii~DFD~TiT~ 276 (563)
..+++|.||||+.
T Consensus 2 ~~~~~D~Dgtl~~ 14 (176)
T TIGR00213 2 KAIFLDRDGTINI 14 (176)
T ss_pred CEEEEeCCCCEeC
Confidence 4789999999984
Done!