Your job contains 1 sequence.
>008500
MSEPIILSDEEDQNALETPIQCPYKKIRTGPHPVAPTVLILDDDPTPKKSGFAPSSSSTP
SFVAETPMSDVCIIKCTSRSWLDPQIRVSNSDENLAGSSRLVCLESDNECESGSGRVDLG
QNELVHSDSDDEKDSEWDLRIGNAGFIQMSGDSSSQPTCSEYDMDLLQDCPEKENFSMEQ
MGNLLNTKRSLQVNADNRKSTDEAVGKKKKMTKEERMLFMEEKKKKKEEEKLRKAALKAE
AAESKKLQKEMQKWAKGKFAQDSIVTEIDAKVVELGSVGGHLLTRFAEKRFKYRIASNPI
ERSIVWTMPVPEHISQISPQGMEIPYILLIYEAEEFCNLVLNESLMDHVSLVRRHYPSHT
ICYLTNRLMAHISKKEKERYKNPANNSGWRRPPVEEVLAKLTTHFFRVHSRQCIDEAEVA
EHVVGLTSSLASCQFRKKLTRLSVNANGSLISKDSVDKNLIKKSPWLKALVSIPKVQPRY
AIAIWKKYPTMKALLSIYMDPSKSVHEKEFLLKDLTVDGLLGDNRKLGEVCSKRVYRILI
AQSGSIKTDDIEDGADFFRCQSN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008500
(563 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2055961 - symbol:EME1B "essential meiotic endo... 1139 8.0e-127 2
UNIPROTKB|Q0J9J6 - symbol:EME1 "Crossover junction endonu... 891 7.9e-96 3
UNIPROTKB|F1RT80 - symbol:EME1 "Uncharacterized protein" ... 111 0.00012 2
UNIPROTKB|G3N153 - symbol:EME1 "Uncharacterized protein" ... 122 0.00036 1
>TAIR|locus:2055961 [details] [associations]
symbol:EME1B "essential meiotic endonuclease 1B"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IDA] [GO:0006310
"DNA recombination" evidence=IDA] InterPro:IPR006166 Pfam:PF02732
SMART:SM00891 GO:GO:0005634 GO:GO:0007126 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0004519
EMBL:AC007168 EMBL:FJ161970 IPI:IPI00520629 IPI:IPI00944276
PIR:D84609 RefSeq:NP_179804.5 UniGene:At.49350
ProteinModelPortal:C5H8J1 PRIDE:C5H8J1 EnsemblPlants:AT2G22140.1
GeneID:816748 KEGG:ath:AT2G22140 TAIR:At2g22140 eggNOG:NOG291952
HOGENOM:HOG000030180 InParanoid:Q9SIF0 KO:K10882 OMA:RYALAVW
PhylomeDB:C5H8J1 ProtClustDB:CLSN2681697 Genevestigator:C5H8J1
Uniprot:C5H8J1
Length = 551
Score = 1139 (406.0 bits), Expect = 8.0e-127, Sum P(2) = 8.0e-127
Identities = 208/307 (67%), Positives = 261/307 (85%)
Query: 252 QKWAKGKFAQDSIVTEIDAKVVELGSVGGHLLTRFAEKRFKYRIASNPIERSIVWTMPVP 311
+KW KGK A SIV EID KV+E GS+GG LL+RF+EK + NPIERSIVWTM +P
Sbjct: 242 KKWEKGKLALKSIVAEIDTKVLE-GSIGGLLLSRFSEKGITIHVGPNPIERSIVWTMTIP 300
Query: 312 EHISQISPQGMEIPYILLIYEAEEFCNLVLNESLMDHVSLVRRHYPSHTICYLTNRLMAH 371
E I+ + PQG +IPY+LL+Y+AEEFCNLV N ++ +S V+ YPS+T+C LTN+LM++
Sbjct: 301 EDIAPLFPQGPKIPYLLLVYDAEEFCNLVANGKFLEIISRVQDRYPSYTVCCLTNKLMSY 360
Query: 372 ISKKEKERYKNPANNSGWRRPPVEEVLAKLTTHFFRVHSRQCIDEAEVAEHVVGLTSSLA 431
+ K+EKE YKNP N WRRPP++EVLAKLTTH+ +VHSR C+DEAEVAEH+VGLTSSLA
Sbjct: 361 VKKREKEEYKNPGN---WRRPPIDEVLAKLTTHYVKVHSRHCVDEAEVAEHIVGLTSSLA 417
Query: 432 SCQFRKKLTRLSVNANGSLISKDSVDKNLIKKSPWLKALVSIPKVQPRYAIAIWKKYPTM 491
SCQFRKKLT LSV+ANG+L+SKDSVDK+LIKKSPWLKALV+IPKVQPRYA+A+WKKYP+M
Sbjct: 418 SCQFRKKLTMLSVSANGALVSKDSVDKHLIKKSPWLKALVAIPKVQPRYALAVWKKYPSM 477
Query: 492 KALLSIYMDPSKSVHEKEFLLKDLTVDGLLGDNRKLGEVCSKRVYRILIAQSGSIKTDDI 551
K+LL +YMD +KSVHEKEFLLKDL V+GL+G + +LGE+CSKR+YR+L++ G+IKTDD+
Sbjct: 478 KSLLKVYMDRNKSVHEKEFLLKDLKVEGLVGGDIRLGEICSKRIYRVLMSHDGAIKTDDV 537
Query: 552 EDGADFF 558
E+GA FF
Sbjct: 538 ENGAAFF 544
Score = 127 (49.8 bits), Expect = 8.0e-127, Sum P(2) = 8.0e-127
Identities = 37/110 (33%), Positives = 60/110 (54%)
Query: 1 MSEPIILSDEEDQNALETPIQCPYKKIRTGPHPVAPTVLILDDDPTPKKSGFAXXXXXXX 60
M++ I++SD EDQ TP+ K+ R +P++ +LI D DPTP+K
Sbjct: 1 MNDHILISDGEDQT---TPLPSLSKRARK--YPIS-AILISDSDPTPQKQ--PPESSFTP 52
Query: 61 XFVAETPMSD-VCIIKCTSRSWLDPQIRVSNSDENLAGSSRLVCLESDNE 109
FV ETP+SD ++KC+ S + SN ++ +G R++ L+S+ E
Sbjct: 53 IFVPETPLSDDFSVVKCSFGS----RALASNREDKFSGK-RIISLDSEFE 97
>UNIPROTKB|Q0J9J6 [details] [associations]
symbol:EME1 "Crossover junction endonuclease EME1"
species:39947 "Oryza sativa Japonica Group" [GO:0009411 "response
to UV" evidence=IEP] [GO:0009644 "response to high light intensity"
evidence=IEP] [GO:0010332 "response to gamma radiation"
evidence=IEP] InterPro:IPR006166 Pfam:PF02732 GO:GO:0005634
GO:GO:0007126 GO:GO:0009411 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0010332
GO:GO:0006310 GO:GO:0009644 GO:GO:0090305 GO:GO:0004519
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG291952 HOGENOM:HOG000030180
KO:K10882 EMBL:AL606635 EMBL:AK066786 RefSeq:NP_001054077.1
UniGene:Os.5453 EnsemblPlants:LOC_Os04g55500.1 GeneID:4337213
KEGG:dosa:Os04t0648700-01 KEGG:osa:4337213 Gramene:Q0J9J6
OMA:CKLATHY ProtClustDB:CLSN2919567 Uniprot:Q0J9J6
Length = 650
Score = 891 (318.7 bits), Expect = 7.9e-96, Sum P(3) = 7.9e-96
Identities = 173/306 (56%), Positives = 224/306 (73%)
Query: 252 QKWAKGKFAQDSIVTEIDAKVVELGSVGGHLLTRFAEKRFKYRIASNPIERSIVWTMPVP 311
+KW GK A IV EID+ V+E GSVGGHL+ F EK +R+ SN I+ SI+W M +P
Sbjct: 345 KKWESGKLATKCIVAEIDSSVIESGSVGGHLVQGFHEKGLCFRVTSNSIKGSILWKMQIP 404
Query: 312 EHISQISPQGMEIPYILLIYEAEEFCNLVLNESLMDHVSLVRRHYPSHTICYLTNRLMAH 371
+Q ++PYIL + +AEEFC+LV +L+DHV VRR YP TICY+TN+LM+
Sbjct: 405 NEFTQDQASTSQVPYILFVLQAEEFCDLVSGGTLLDHVQKVRRQYPEFTICYVTNKLMSF 464
Query: 372 ISKKEKERY-KNPANNSGWRRPPVEEVLAKLTTHFFRVHSRQCIDEAEVAEHVVGLTSSL 430
I ++E+ +Y K +N++ W+RPPVEE L KL TH+ RV SR C DEAEV EH+VGLT SL
Sbjct: 465 IKRREQNQYNKTTSNSNSWKRPPVEEALCKLATHYARVRSRHCTDEAEVTEHIVGLTYSL 524
Query: 431 ASCQFRKKLTRLSVNANGSLISKDSVDKNLIKKSPWLKALVSIPKVQPRYAIAIWKKYPT 490
A+C+FRK LT LSV+ANGS ISK VDK+ IKKS WLK+LV+IP V P AIAI KKYP+
Sbjct: 525 ANCKFRKPLTWLSVHANGSNISKGCVDKDRIKKSAWLKSLVAIPGVSPGQAIAIEKKYPS 584
Query: 491 MKALLSIYMDPSKSVHEKEFLLKDLTVDGLLGD-NRKLGEVCSKRVYRILIAQSGSIKTD 549
M++LL++YMD SKSVHEKE LL+DL ++G LGD R+LG CSK+VY IL+AQ+G+ + +
Sbjct: 585 MRSLLNVYMDDSKSVHEKEHLLEDLRLEGPLGDFKRRLGPACSKKVYTILMAQNGAAEVE 644
Query: 550 DIEDGA 555
GA
Sbjct: 645 VDRRGA 650
Score = 58 (25.5 bits), Expect = 7.9e-96, Sum P(3) = 7.9e-96
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 34 VAPTVLILDDDPTP-KKSGFAXXXXXXXXFVAETPMSDV-CIIK 75
+A + ++LDD PTP K+ VA+TP S V C ++
Sbjct: 60 LAASTIVLDDTPTPPKRRPPPVAADRSASVVADTPRSFVPCSLR 103
Score = 37 (18.1 bits), Expect = 7.9e-96, Sum P(3) = 7.9e-96
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 158 TCSEYDMDLLQDCPEKEN-FSMEQMGNLLNTKRSLQVNADNRKSTDEAVGKKKK 210
T E D + CP++EN +E+ ++ L+ K E KK+K
Sbjct: 270 TLKEADPFINNHCPQEENALPIEERKKKQQEEKRLK----KEKKAREIEEKKQK 319
>UNIPROTKB|F1RT80 [details] [associations]
symbol:EME1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR006166 Pfam:PF02732
SMART:SM00891 GO:GO:0003677 GO:GO:0006259 GO:GO:0090305
GO:GO:0004518 OMA:LQMEGGG GeneTree:ENSGT00530000063937
EMBL:FP102382 Ensembl:ENSSSCT00000019127 ArrayExpress:F1RT80
Uniprot:F1RT80
Length = 576
Score = 111 (44.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 49/194 (25%), Positives = 85/194 (43%)
Query: 375 KEKERYKNPANNSGWR--RPPVEEVLAKLTTHFFRVHSRQCIDEAEVAEHVVGLTSSLAS 432
KEK++ + P N G R VEE L L H +R E+A+ T ++A
Sbjct: 394 KEKKQ-RQPETNPGTTVTRVDVEEALVDLQLHT-EAQARIVWSWKELADLACTFTKAVAE 451
Query: 433 CQFRKKLTRLSVN-------ANGSLISKDSVDKNLIKKSPWLKALVSIPKVQPRYAIAIW 485
F+K + S + A G+ + + L+ W + + + +V A A+
Sbjct: 452 APFKKLRGQTSFSFCLESDWAGGAKVDRSGRGLALV----WRRQIQQLNRVSLEMASAVV 507
Query: 486 KKYPTMKALLSIYMDPSKSVHEKEFLLKDLTV---DGLLGDNRKLGEVCSKRVYRILIAQ 542
YP+ + L+ Y S E++ LL D+ V +G+ +R++G S+R+Y Q
Sbjct: 508 DAYPSPQLLIQAYKR-CFSEQERQNLLADIQVRRGEGVTATSRRVGPELSRRIY----LQ 562
Query: 543 SGSIKTDDIEDGAD 556
+++ D DG D
Sbjct: 563 MTALQPDLSLDGTD 576
Score = 61 (26.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/80 (26%), Positives = 36/80 (45%)
Query: 264 IVTEIDAKVVELGSVGGHLLTRFAEKRFKYRIASNPIERSIVWTMPV-PEHISQISPQGM 322
IV ++D ++++ GG LL+ I + RSI W P + S +
Sbjct: 255 IVVQLDPVLLQMEG-GGQLLSALQSMECCCVIEVQAVPRSITWRRKAGPTEDGEES--WV 311
Query: 323 EIPYILLIYEAEEFCNLVLN 342
E P +L + AE F +++ N
Sbjct: 312 EEPVVLALLLAEAFVSMISN 331
>UNIPROTKB|G3N153 [details] [associations]
symbol:EME1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR006166 Pfam:PF02732
SMART:SM00891 GO:GO:0003677 GO:GO:0006259 GO:GO:0090305
GO:GO:0004518 OMA:LQMEGGG GeneTree:ENSGT00530000063937
EMBL:DAAA02049037 Ensembl:ENSBTAT00000065898 Uniprot:G3N153
Length = 574
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 48/192 (25%), Positives = 84/192 (43%)
Query: 373 SKKEKERYKNPANNSGWR--RPPVEEVLAKLTTHFFRVHSRQCIDEAEVAEHVVGLTSSL 430
+K++K++ K P N+G R VEE L L H +R E+A+ T ++
Sbjct: 389 AKEKKKQQKQPEANTGAMVTRVDVEEALVDLQLHT-EAQARIVQSWKELADLACAFTKAV 447
Query: 431 ASCQFRKKLTRLSVN-------ANGSLISKDSVDKNLIKKSPWLKALVSIPKVQPRYAIA 483
A F+K + S + A G+ + + L+ W + + + +V A A
Sbjct: 448 AEAPFKKLRDQTSFSFCLESDWAGGAKVDRSGRGLALV----WRRQIQQLNRVSLEMASA 503
Query: 484 IWKKYPTMKALLSIYMDPSKSVHEKEFLLKDLTV---DGLLGDNRKLGEVCSKRVYRILI 540
I YP+ + L+ Y S E++ LL DL V +G+ R++G S+R+Y +
Sbjct: 504 IVDAYPSPQLLIQAYKR-CLSEQERQNLLADLQVRRGEGVTATLRRVGPELSRRIYLQMT 562
Query: 541 AQSGSIKTDDIE 552
A + D +
Sbjct: 563 ALQPDLSLDSAD 574
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 563 505 0.00086 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 622 (66 KB)
Total size of DFA: 313 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.48u 0.16s 41.64t Elapsed: 00:00:01
Total cpu time: 41.48u 0.16s 41.64t Elapsed: 00:00:01
Start: Thu May 9 21:38:57 2013 End: Thu May 9 21:38:58 2013