Query 008503
Match_columns 563
No_of_seqs 491 out of 4416
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:05:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3da1_A Glycerol-3-phosphate de 100.0 2.7E-64 9.3E-69 549.8 46.5 478 54-550 5-542 (561)
2 2rgh_A Alpha-glycerophosphate 100.0 4.8E-60 1.7E-64 517.3 50.6 482 53-556 18-569 (571)
3 2qcu_A Aerobic glycerol-3-phos 100.0 6.1E-56 2.1E-60 479.0 45.0 434 71-531 3-496 (501)
4 3dme_A Conserved exported prot 100.0 3.1E-30 1E-34 266.5 25.7 306 70-388 3-368 (369)
5 1y56_B Sarcosine oxidase; dehy 100.0 5.9E-28 2E-32 251.2 31.3 298 70-390 4-355 (382)
6 3nyc_A D-arginine dehydrogenas 100.0 3.1E-28 1.1E-32 252.9 28.4 296 69-390 7-358 (381)
7 3axb_A Putative oxidoreductase 100.0 2E-27 6.7E-32 252.9 22.1 298 69-390 21-418 (448)
8 2gag_B Heterotetrameric sarcos 100.0 6.2E-26 2.1E-30 237.7 30.9 296 69-390 19-375 (405)
9 2gf3_A MSOX, monomeric sarcosi 99.9 7.2E-26 2.4E-30 235.9 30.4 296 71-390 3-364 (389)
10 2oln_A NIKD protein; flavoprot 99.9 1.6E-25 5.6E-30 234.1 32.6 297 71-390 4-374 (397)
11 1ryi_A Glycine oxidase; flavop 99.9 6.2E-26 2.1E-30 235.9 22.8 292 69-390 15-362 (382)
12 3pvc_A TRNA 5-methylaminomethy 99.9 6.3E-26 2.2E-30 253.5 23.9 291 69-389 262-648 (689)
13 3ps9_A TRNA 5-methylaminomethy 99.9 1.4E-25 4.8E-30 250.4 26.6 289 70-389 271-644 (676)
14 3c4n_A Uncharacterized protein 99.9 5.2E-26 1.8E-30 238.7 20.6 293 69-390 34-397 (405)
15 1pj5_A N,N-dimethylglycine oxi 99.9 3.2E-24 1.1E-28 244.7 31.5 297 70-390 3-379 (830)
16 3g3e_A D-amino-acid oxidase; F 99.9 2.2E-26 7.6E-31 236.7 12.4 282 72-391 1-334 (351)
17 2uzz_A N-methyl-L-tryptophan o 99.9 1.8E-24 6.2E-29 224.0 25.5 292 71-390 2-357 (372)
18 1c0p_A D-amino acid oxidase; a 99.9 4.6E-25 1.6E-29 228.0 20.1 280 69-390 4-357 (363)
19 3dje_A Fructosyl amine: oxygen 99.9 9.5E-24 3.2E-28 223.7 25.5 296 69-390 4-384 (438)
20 3cgv_A Geranylgeranyl reductas 99.7 4E-16 1.4E-20 162.4 23.7 297 71-389 4-313 (397)
21 3nix_A Flavoprotein/dehydrogen 99.7 2.9E-16 9.8E-21 165.1 18.9 159 69-244 3-177 (421)
22 3oz2_A Digeranylgeranylglycero 99.7 2E-15 6.7E-20 156.7 20.3 251 71-341 4-268 (397)
23 2gag_A Heterotetrameric sarcos 99.6 6.5E-16 2.2E-20 178.0 11.3 57 475-534 487-544 (965)
24 1qo8_A Flavocytochrome C3 fuma 99.6 3.8E-14 1.3E-18 154.6 20.9 165 68-234 118-314 (566)
25 3e1t_A Halogenase; flavoprotei 99.6 2.8E-14 9.5E-19 153.9 18.3 158 68-241 4-180 (512)
26 3atr_A Conserved archaeal prot 99.6 4.1E-13 1.4E-17 142.5 26.1 164 70-242 5-171 (453)
27 4at0_A 3-ketosteroid-delta4-5a 99.6 4.6E-14 1.6E-18 152.0 18.6 162 69-233 39-265 (510)
28 3ihg_A RDME; flavoenzyme, anth 99.6 1.5E-13 5.1E-18 149.0 22.1 161 68-243 2-193 (535)
29 1y0p_A Fumarate reductase flav 99.6 8.6E-14 2.9E-18 152.1 19.8 163 69-233 124-318 (571)
30 1y56_A Hypothetical protein PH 99.6 7.1E-15 2.4E-19 157.7 10.6 57 475-535 417-473 (493)
31 3i3l_A Alkylhalidase CMLS; fla 99.6 5.7E-14 2E-18 153.3 17.6 157 69-242 21-197 (591)
32 3fmw_A Oxygenase; mithramycin, 99.5 1.5E-13 5.3E-18 149.5 18.7 159 69-244 47-218 (570)
33 2qa2_A CABE, polyketide oxygen 99.5 3.6E-13 1.2E-17 144.5 19.7 159 69-244 10-177 (499)
34 2qa1_A PGAE, polyketide oxygen 99.5 3.8E-12 1.3E-16 136.6 26.4 158 69-243 9-175 (500)
35 2wdq_A Succinate dehydrogenase 99.5 2.7E-13 9.3E-18 148.1 17.0 166 69-235 5-209 (588)
36 2weu_A Tryptophan 5-halogenase 99.5 1.5E-12 5.1E-17 140.3 21.3 198 162-385 167-370 (511)
37 2bs2_A Quinol-fumarate reducta 99.5 4.4E-13 1.5E-17 147.8 15.8 164 69-234 3-222 (660)
38 1d4d_A Flavocytochrome C fumar 99.5 1.6E-12 5.4E-17 141.9 19.1 164 69-234 124-319 (572)
39 2gmh_A Electron transfer flavo 99.4 2.8E-12 9.5E-17 140.2 20.0 147 70-234 34-219 (584)
40 2i0z_A NAD(FAD)-utilizing dehy 99.4 2E-12 6.8E-17 136.9 18.0 165 69-242 24-211 (447)
41 2h88_A Succinate dehydrogenase 99.4 1.5E-12 5.1E-17 142.6 17.5 163 70-234 17-219 (621)
42 3rp8_A Flavoprotein monooxygen 99.4 3.5E-12 1.2E-16 133.2 19.2 153 69-242 21-191 (407)
43 1chu_A Protein (L-aspartate ox 99.4 3.3E-13 1.1E-17 146.1 10.7 164 69-234 6-210 (540)
44 3v76_A Flavoprotein; structura 99.4 2.6E-12 8.9E-17 134.4 15.9 149 69-232 25-187 (417)
45 2aqj_A Tryptophan halogenase, 99.4 1.1E-11 3.9E-16 134.3 20.9 74 162-242 159-232 (538)
46 1rp0_A ARA6, thiazole biosynth 99.4 4.6E-12 1.6E-16 125.7 16.0 144 69-232 37-191 (284)
47 1kf6_A Fumarate reductase flav 99.4 2.4E-12 8.1E-17 141.0 15.2 165 69-235 3-200 (602)
48 2x3n_A Probable FAD-dependent 99.4 4.2E-12 1.4E-16 132.3 14.6 156 68-242 3-175 (399)
49 2e4g_A Tryptophan halogenase; 99.4 3.7E-11 1.3E-15 130.5 21.9 73 163-242 189-262 (550)
50 3gyx_A Adenylylsulfate reducta 99.3 3.4E-12 1.2E-16 140.6 12.1 165 69-234 20-235 (662)
51 2dkh_A 3-hydroxybenzoate hydro 99.3 2.5E-11 8.5E-16 134.2 19.0 161 70-242 31-220 (639)
52 1jnr_A Adenylylsulfate reducta 99.3 1.5E-11 5.2E-16 135.8 17.1 165 69-234 20-220 (643)
53 3nlc_A Uncharacterized protein 99.3 1.1E-11 3.7E-16 133.4 14.3 157 69-234 105-279 (549)
54 2pyx_A Tryptophan halogenase; 99.3 4.4E-11 1.5E-15 129.2 18.0 73 163-242 170-243 (526)
55 3jsk_A Cypbp37 protein; octame 99.3 3.5E-11 1.2E-15 121.1 15.0 147 69-233 77-252 (344)
56 2r0c_A REBC; flavin adenine di 99.3 5.7E-11 1.9E-15 129.0 16.8 157 69-243 24-206 (549)
57 3c96_A Flavin-containing monoo 99.3 7.4E-11 2.5E-15 123.3 17.2 154 71-240 4-176 (410)
58 1pn0_A Phenol 2-monooxygenase; 99.3 9.5E-11 3.2E-15 129.8 18.5 162 69-243 6-240 (665)
59 2e5v_A L-aspartate oxidase; ar 99.3 4.8E-11 1.7E-15 127.0 15.3 154 73-234 1-178 (472)
60 2gqf_A Hypothetical protein HI 99.3 1.2E-10 4.1E-15 121.2 17.8 148 71-232 4-168 (401)
61 3alj_A 2-methyl-3-hydroxypyrid 99.3 1.5E-10 5.1E-15 119.6 18.3 148 70-241 10-168 (379)
62 2gjc_A Thiazole biosynthetic e 99.2 1.5E-10 5E-15 115.9 16.5 146 69-232 63-239 (326)
63 3ces_A MNMG, tRNA uridine 5-ca 99.2 7.5E-11 2.6E-15 128.0 14.8 150 70-233 27-182 (651)
64 1k0i_A P-hydroxybenzoate hydro 99.2 2.5E-11 8.5E-16 126.1 10.6 156 71-241 2-171 (394)
65 2zxi_A TRNA uridine 5-carboxym 99.2 1.1E-10 3.6E-15 126.4 15.1 149 70-233 26-181 (637)
66 4dgk_A Phytoene dehydrogenase; 99.2 1.7E-10 5.9E-15 123.7 15.4 58 168-232 221-278 (501)
67 2cul_A Glucose-inhibited divis 99.2 2.3E-10 7.9E-15 109.9 14.3 125 71-235 3-128 (232)
68 1yvv_A Amine oxidase, flavin-c 99.2 4.2E-09 1.4E-13 106.5 24.1 38 71-108 2-39 (336)
69 3ka7_A Oxidoreductase; structu 99.2 2.4E-10 8.1E-15 119.9 14.2 58 168-233 196-253 (425)
70 2vou_A 2,6-dihydroxypyridine h 99.1 4.1E-10 1.4E-14 117.1 15.6 147 69-240 3-160 (397)
71 2bry_A NEDD9 interacting prote 99.1 5.8E-11 2E-15 127.2 9.2 142 69-233 90-231 (497)
72 3cp8_A TRNA uridine 5-carboxym 99.1 3E-10 1E-14 123.2 14.1 151 69-233 19-175 (641)
73 3qvp_A Glucose oxidase; oxidor 99.1 2.9E-10 9.9E-15 123.3 13.8 63 179-242 238-304 (583)
74 4fk1_A Putative thioredoxin re 99.1 4.4E-10 1.5E-14 112.4 12.9 113 69-231 4-116 (304)
75 4a9w_A Monooxygenase; baeyer-v 99.1 5.2E-10 1.8E-14 113.9 13.1 130 71-233 3-133 (357)
76 3q9t_A Choline dehydrogenase a 99.1 1.6E-09 5.6E-14 117.5 16.1 61 180-241 218-280 (577)
77 4hb9_A Similarities with proba 99.1 1.4E-09 4.7E-14 113.1 14.9 153 72-242 2-175 (412)
78 2gv8_A Monooxygenase; FMO, FAD 99.0 2.1E-09 7.3E-14 113.5 14.7 152 69-233 4-178 (447)
79 3i6d_A Protoporphyrinogen oxid 99.0 1.3E-08 4.5E-13 107.8 20.7 40 69-108 3-48 (470)
80 2ywl_A Thioredoxin reductase r 99.0 2.2E-09 7.6E-14 98.5 12.6 118 72-242 2-119 (180)
81 3nrn_A Uncharacterized protein 99.0 1.2E-09 4.2E-14 114.4 12.3 56 167-232 188-243 (421)
82 2xve_A Flavin-containing monoo 99.0 5.2E-09 1.8E-13 111.0 16.0 146 72-233 3-167 (464)
83 2xdo_A TETX2 protein; tetracyc 99.0 1.8E-09 6.1E-14 112.3 12.1 151 69-240 24-189 (398)
84 3itj_A Thioredoxin reductase 1 99.0 1.4E-09 4.8E-14 109.9 10.5 123 69-232 20-142 (338)
85 3gwf_A Cyclohexanone monooxyge 99.0 2.3E-09 8E-14 115.7 12.8 138 70-233 7-148 (540)
86 2zbw_A Thioredoxin reductase; 98.9 3.2E-09 1.1E-13 107.4 11.4 119 69-232 3-121 (335)
87 3ab1_A Ferredoxin--NADP reduct 98.9 3.6E-09 1.2E-13 108.3 11.8 118 70-232 13-131 (360)
88 3fim_B ARYL-alcohol oxidase; A 98.9 2.6E-09 8.9E-14 115.6 11.0 63 179-242 219-287 (566)
89 3lzw_A Ferredoxin--NADP reduct 98.9 1.1E-09 3.9E-14 110.3 7.6 117 70-231 6-122 (332)
90 4ap3_A Steroid monooxygenase; 98.9 3.9E-09 1.3E-13 114.2 11.9 138 69-232 19-159 (549)
91 4gcm_A TRXR, thioredoxin reduc 98.9 4E-09 1.4E-13 105.7 11.1 114 67-231 2-115 (312)
92 2q0l_A TRXR, thioredoxin reduc 98.9 9.9E-09 3.4E-13 102.6 13.5 112 72-232 2-114 (311)
93 3p1w_A Rabgdi protein; GDI RAB 98.9 4E-09 1.4E-13 111.2 11.0 58 168-231 256-313 (475)
94 3f8d_A Thioredoxin reductase ( 98.9 7.3E-09 2.5E-13 103.8 12.0 111 71-232 15-125 (323)
95 3qj4_A Renalase; FAD/NAD(P)-bi 98.9 6.5E-09 2.2E-13 105.6 11.8 140 72-230 2-163 (342)
96 3d1c_A Flavin-containing putat 98.9 4.1E-09 1.4E-13 108.0 10.4 135 71-232 4-143 (369)
97 2jbv_A Choline oxidase; alcoho 98.9 6.4E-09 2.2E-13 112.6 12.2 67 173-240 213-282 (546)
98 3uox_A Otemo; baeyer-villiger 98.9 7.4E-09 2.5E-13 111.9 12.6 140 69-233 7-148 (545)
99 1w4x_A Phenylacetone monooxyge 98.9 7.3E-09 2.5E-13 112.2 12.3 139 69-233 14-155 (542)
100 3s5w_A L-ornithine 5-monooxyge 98.9 4.6E-09 1.6E-13 111.4 10.6 150 70-230 29-190 (463)
101 1ju2_A HydroxynitrIle lyase; f 98.9 1E-09 3.6E-14 118.5 5.2 67 174-241 200-271 (536)
102 3pl8_A Pyranose 2-oxidase; sub 98.9 1.2E-08 4.2E-13 111.9 13.7 61 181-241 273-334 (623)
103 4a5l_A Thioredoxin reductase; 98.9 4.3E-09 1.5E-13 105.4 9.0 118 70-231 3-120 (314)
104 3t37_A Probable dehydrogenase; 98.9 1.2E-08 4.1E-13 110.1 13.1 57 180-240 223-280 (526)
105 1fl2_A Alkyl hydroperoxide red 98.8 1.3E-08 4.5E-13 101.6 11.9 115 71-232 1-115 (310)
106 3fbs_A Oxidoreductase; structu 98.8 2.3E-08 7.8E-13 98.9 13.3 110 71-232 2-112 (297)
107 3cty_A Thioredoxin reductase; 98.8 1.7E-08 5.9E-13 101.3 12.4 112 70-232 15-126 (319)
108 1vdc_A NTR, NADPH dependent th 98.8 4E-09 1.4E-13 106.6 7.6 115 70-233 7-125 (333)
109 1trb_A Thioredoxin reductase; 98.8 5.8E-08 2E-12 97.3 16.0 63 168-232 184-247 (320)
110 4gde_A UDP-galactopyranose mut 98.8 5.2E-09 1.8E-13 112.3 8.7 42 68-109 7-49 (513)
111 3lov_A Protoporphyrinogen oxid 98.8 2.3E-07 7.9E-12 98.5 20.3 38 71-108 4-43 (475)
112 2q7v_A Thioredoxin reductase; 98.8 1.9E-08 6.5E-13 101.3 11.2 115 70-232 7-123 (325)
113 2bcg_G Secretory pathway GDP d 98.8 3.2E-08 1.1E-12 104.6 13.2 61 168-235 242-303 (453)
114 3nks_A Protoporphyrinogen oxid 98.8 1.7E-08 5.6E-13 107.5 10.9 56 169-232 235-290 (477)
115 1hyu_A AHPF, alkyl hydroperoxi 98.8 6E-08 2E-12 104.4 14.5 118 68-232 209-326 (521)
116 1kdg_A CDH, cellobiose dehydro 98.8 4E-08 1.4E-12 106.5 12.8 68 173-242 200-272 (546)
117 3r9u_A Thioredoxin reductase; 98.8 3.1E-08 1E-12 98.9 11.1 113 70-230 3-116 (315)
118 2a87_A TRXR, TR, thioredoxin r 98.7 6.8E-08 2.3E-12 97.7 13.2 114 69-232 12-126 (335)
119 3o0h_A Glutathione reductase; 98.7 1.5E-07 5.1E-12 100.4 15.5 58 168-233 232-289 (484)
120 1n4w_A CHOD, cholesterol oxida 98.7 1.6E-07 5.3E-12 100.7 15.3 67 173-240 226-297 (504)
121 3urh_A Dihydrolipoyl dehydroge 98.7 1.7E-07 5.9E-12 100.1 15.3 62 168-232 239-300 (491)
122 3k7m_X 6-hydroxy-L-nicotine ox 98.7 4.4E-08 1.5E-12 102.7 10.4 38 72-109 2-39 (431)
123 1gpe_A Protein (glucose oxidas 98.7 1.4E-07 4.6E-12 103.0 13.9 63 178-241 241-307 (587)
124 3dgh_A TRXR-1, thioredoxin red 98.6 2.4E-07 8.1E-12 98.8 14.4 62 168-231 227-288 (483)
125 4dna_A Probable glutathione re 98.6 2.9E-07 9.9E-12 97.6 13.8 58 168-233 211-269 (463)
126 1d5t_A Guanine nucleotide diss 98.6 3.4E-07 1.1E-11 96.2 13.9 60 168-235 234-293 (433)
127 3dk9_A Grase, GR, glutathione 98.6 6.5E-07 2.2E-11 95.3 16.3 64 168-232 228-293 (478)
128 4b63_A L-ornithine N5 monooxyg 98.6 6.4E-08 2.2E-12 103.7 8.0 151 69-230 37-212 (501)
129 1coy_A Cholesterol oxidase; ox 98.6 2.3E-07 8E-12 99.4 11.8 67 173-240 231-302 (507)
130 3c4a_A Probable tryptophan hyd 98.6 4.2E-08 1.4E-12 101.2 5.5 131 72-233 1-144 (381)
131 3kkj_A Amine oxidase, flavin-c 98.5 4.8E-08 1.6E-12 94.4 5.4 38 71-108 2-39 (336)
132 3ic9_A Dihydrolipoamide dehydr 98.5 5E-07 1.7E-11 96.5 13.8 60 168-232 215-274 (492)
133 2cdu_A NADPH oxidase; flavoenz 98.5 2E-07 6.8E-12 98.5 10.6 115 72-232 1-117 (452)
134 3lad_A Dihydrolipoamide dehydr 98.5 4E-07 1.4E-11 96.9 12.9 36 70-105 2-37 (476)
135 3iwa_A FAD-dependent pyridine 98.5 2.2E-07 7.7E-12 98.7 10.6 117 71-230 3-123 (472)
136 3oc4_A Oxidoreductase, pyridin 98.5 1.8E-07 6E-12 98.9 9.5 110 72-231 3-114 (452)
137 3ics_A Coenzyme A-disulfide re 98.5 2.8E-07 9.6E-12 100.8 11.0 115 69-230 34-150 (588)
138 1ojt_A Surface protein; redox- 98.5 2.2E-07 7.4E-12 99.1 9.9 35 71-105 6-40 (482)
139 3kd9_A Coenzyme A disulfide re 98.5 1.9E-07 6.6E-12 98.5 9.0 108 71-231 3-113 (449)
140 1dxl_A Dihydrolipoamide dehydr 98.5 3.1E-07 1.1E-11 97.5 10.5 40 69-108 4-43 (470)
141 1nhp_A NADH peroxidase; oxidor 98.5 1.3E-07 4.3E-12 99.9 7.2 113 72-232 1-115 (447)
142 3h8l_A NADH oxidase; membrane 98.5 1.1E-07 3.6E-12 99.2 6.4 109 72-232 2-113 (409)
143 3qfa_A Thioredoxin reductase 1 98.5 1.1E-06 3.6E-11 94.6 13.8 36 69-104 30-65 (519)
144 3ihm_A Styrene monooxygenase A 98.5 1.1E-07 3.9E-12 99.7 6.0 35 70-104 21-55 (430)
145 3l8k_A Dihydrolipoyl dehydroge 98.5 2.4E-07 8.1E-12 98.4 8.5 38 71-108 4-41 (466)
146 2a8x_A Dihydrolipoyl dehydroge 98.5 4.5E-07 1.5E-11 96.1 10.4 34 71-104 3-36 (464)
147 3k30_A Histamine dehydrogenase 98.5 8.6E-07 2.9E-11 98.7 13.1 41 69-109 389-429 (690)
148 3cgb_A Pyridine nucleotide-dis 98.5 2.1E-07 7.3E-12 99.1 7.8 113 71-231 36-151 (480)
149 1v59_A Dihydrolipoamide dehydr 98.4 3.3E-07 1.1E-11 97.5 9.2 36 70-105 4-39 (478)
150 1ebd_A E3BD, dihydrolipoamide 98.4 1E-06 3.4E-11 93.2 12.4 34 71-104 3-36 (455)
151 1q1r_A Putidaredoxin reductase 98.4 4.6E-07 1.6E-11 95.1 9.6 108 71-232 4-114 (431)
152 3dgz_A Thioredoxin reductase 2 98.4 1.4E-06 4.7E-11 93.0 13.4 35 69-103 4-38 (488)
153 4b1b_A TRXR, thioredoxin reduc 98.4 2.1E-06 7.1E-11 92.4 14.8 36 69-104 40-75 (542)
154 3lxd_A FAD-dependent pyridine 98.4 3.5E-07 1.2E-11 95.4 8.6 109 69-231 7-118 (415)
155 1zk7_A HGII, reductase, mercur 98.4 6.7E-07 2.3E-11 94.8 10.7 36 70-105 3-38 (467)
156 2bc0_A NADH oxidase; flavoprot 98.4 1.6E-07 5.5E-12 100.3 5.8 113 70-232 34-149 (490)
157 3ntd_A FAD-dependent pyridine 98.4 5.6E-07 1.9E-11 97.9 9.9 113 72-231 2-116 (565)
158 2hqm_A GR, grase, glutathione 98.4 4E-07 1.4E-11 96.9 8.5 35 70-104 10-44 (479)
159 2qae_A Lipoamide, dihydrolipoy 98.4 9E-07 3.1E-11 93.9 11.1 38 71-108 2-39 (468)
160 4gut_A Lysine-specific histone 98.4 6.1E-07 2.1E-11 100.5 10.1 39 70-108 335-373 (776)
161 1xdi_A RV3303C-LPDA; reductase 98.4 1.2E-06 4.3E-11 93.6 11.1 34 71-104 2-38 (499)
162 3klj_A NAD(FAD)-dependent dehy 98.3 1E-06 3.5E-11 91.0 9.7 107 70-230 8-114 (385)
163 1zmd_A Dihydrolipoyl dehydroge 98.3 1.1E-06 3.7E-11 93.4 10.1 39 70-108 5-43 (474)
164 1fec_A Trypanothione reductase 98.3 1.2E-06 4E-11 93.5 10.0 33 70-102 2-35 (490)
165 2eq6_A Pyruvate dehydrogenase 98.3 1.4E-06 4.7E-11 92.3 10.4 34 71-104 6-39 (464)
166 1xhc_A NADH oxidase /nitrite r 98.3 3.8E-07 1.3E-11 93.5 5.9 104 72-231 9-112 (367)
167 2yqu_A 2-oxoglutarate dehydrog 98.3 2.1E-06 7.1E-11 90.7 10.3 35 71-105 1-35 (455)
168 3fg2_P Putative rubredoxin red 98.3 1.4E-06 4.7E-11 90.6 8.5 33 72-104 2-36 (404)
169 1v59_A Dihydrolipoamide dehydr 98.3 1.1E-05 3.6E-10 85.8 15.6 106 71-233 183-288 (478)
170 2vdc_G Glutamate synthase [NAD 98.3 4.7E-07 1.6E-11 95.5 4.8 39 70-108 121-159 (456)
171 2gqw_A Ferredoxin reductase; f 98.3 5.9E-07 2E-11 93.5 5.4 105 69-232 5-113 (408)
172 3fg2_P Putative rubredoxin red 98.3 8.2E-06 2.8E-10 84.7 14.1 110 71-242 142-252 (404)
173 3sx6_A Sulfide-quinone reducta 98.3 1.8E-06 6E-11 90.8 9.0 107 71-233 4-113 (437)
174 3fpz_A Thiazole biosynthetic e 98.2 7.4E-07 2.5E-11 89.8 5.4 42 68-109 62-105 (326)
175 3lxd_A FAD-dependent pyridine 98.2 1.1E-05 3.6E-10 84.1 14.4 110 71-242 152-262 (415)
176 2v3a_A Rubredoxin reductase; a 98.2 9.6E-06 3.3E-10 83.5 13.8 109 71-242 145-254 (384)
177 1mo9_A ORF3; nucleotide bindin 98.2 1.2E-05 4.1E-10 86.5 15.0 112 72-242 215-328 (523)
178 4eqs_A Coenzyme A disulfide re 98.2 2.7E-06 9.4E-11 89.3 9.3 113 73-232 2-116 (437)
179 3ef6_A Toluene 1,2-dioxygenase 98.2 7.8E-07 2.7E-11 92.7 5.1 104 72-231 3-110 (410)
180 2wpf_A Trypanothione reductase 98.2 3.3E-06 1.1E-10 90.2 9.9 32 71-102 7-39 (495)
181 2v3a_A Rubredoxin reductase; a 98.2 1.9E-06 6.5E-11 88.8 7.8 107 71-232 4-113 (384)
182 2r9z_A Glutathione amide reduc 98.2 5.3E-06 1.8E-10 87.8 11.1 36 70-105 3-38 (463)
183 1onf_A GR, grase, glutathione 98.2 2.5E-06 8.6E-11 91.2 8.3 34 71-104 2-35 (500)
184 1lvl_A Dihydrolipoamide dehydr 98.2 4.8E-06 1.7E-10 88.0 10.4 35 70-104 4-38 (458)
185 3h28_A Sulfide-quinone reducta 98.2 6E-07 2E-11 94.2 3.1 33 72-104 3-37 (430)
186 2eq6_A Pyruvate dehydrogenase 98.2 2.2E-05 7.4E-10 83.1 15.0 104 71-233 169-272 (464)
187 4e6k_G BFD, bacterioferritin-a 98.1 6.7E-07 2.3E-11 67.9 2.2 50 475-530 6-55 (73)
188 1mo9_A ORF3; nucleotide bindin 98.1 5.4E-06 1.8E-10 89.2 10.2 36 69-104 41-76 (523)
189 2x8g_A Thioredoxin glutathione 98.1 2E-05 6.8E-10 86.2 14.2 35 69-103 105-139 (598)
190 1q1r_A Putidaredoxin reductase 98.1 2.4E-05 8.1E-10 82.0 14.1 110 71-242 149-261 (431)
191 3itj_A Thioredoxin reductase 1 98.1 2.2E-05 7.5E-10 78.8 13.4 98 71-232 173-271 (338)
192 2yqu_A 2-oxoglutarate dehydrog 98.1 2E-05 6.7E-10 83.2 13.1 99 71-233 167-265 (455)
193 1fl2_A Alkyl hydroperoxide red 98.1 2.9E-05 1E-09 77.0 13.7 97 71-231 144-241 (310)
194 1ges_A Glutathione reductase; 98.1 9.7E-06 3.3E-10 85.4 10.4 36 70-105 3-38 (450)
195 3cty_A Thioredoxin reductase; 98.1 2.3E-05 7.7E-10 78.3 12.7 98 71-232 155-252 (319)
196 1zmd_A Dihydrolipoyl dehydroge 98.1 3.5E-05 1.2E-09 81.7 14.8 106 71-233 178-283 (474)
197 1ebd_A E3BD, dihydrolipoamide 98.1 3.1E-05 1.1E-09 81.6 14.1 102 70-232 169-270 (455)
198 3ef6_A Toluene 1,2-dioxygenase 98.0 1.6E-05 5.5E-10 82.6 11.1 109 71-242 143-252 (410)
199 2hqm_A GR, grase, glutathione 98.0 3.4E-05 1.2E-09 81.9 13.5 103 70-233 184-286 (479)
200 1ges_A Glutathione reductase; 98.0 3.4E-05 1.1E-09 81.3 13.2 101 70-233 166-266 (450)
201 3dgz_A Thioredoxin reductase 2 98.0 6.3E-05 2.1E-09 80.1 15.2 102 71-231 185-286 (488)
202 1ps9_A 2,4-dienoyl-COA reducta 98.0 5.4E-05 1.8E-09 83.9 15.2 41 69-109 371-411 (671)
203 1nhp_A NADH peroxidase; oxidor 98.0 3.4E-05 1.1E-09 81.2 12.4 100 70-233 148-247 (447)
204 2zbw_A Thioredoxin reductase; 98.0 6.9E-05 2.4E-09 75.2 14.0 101 72-233 153-253 (335)
205 3hyw_A Sulfide-quinone reducta 98.0 4.2E-06 1.4E-10 87.7 5.0 32 73-104 4-37 (430)
206 1dxl_A Dihydrolipoamide dehydr 98.0 3.6E-05 1.2E-09 81.5 12.2 104 71-233 177-280 (470)
207 2r9z_A Glutathione amide reduc 98.0 6.7E-05 2.3E-09 79.3 14.1 100 71-233 166-265 (463)
208 3s5w_A L-ornithine 5-monooxyge 98.0 7.7E-05 2.6E-09 78.6 14.5 142 71-233 227-378 (463)
209 3cgb_A Pyridine nucleotide-dis 98.0 3.6E-05 1.2E-09 81.8 11.9 99 70-233 185-283 (480)
210 2q7v_A Thioredoxin reductase; 97.9 7E-05 2.4E-09 74.9 13.3 97 71-232 152-249 (325)
211 2yg5_A Putrescine oxidase; oxi 97.9 4.3E-06 1.5E-10 88.0 4.5 41 69-109 3-43 (453)
212 2qae_A Lipoamide, dihydrolipoy 97.9 9.1E-05 3.1E-09 78.3 14.7 104 70-233 173-277 (468)
213 2q0l_A TRXR, thioredoxin reduc 97.9 8.6E-05 2.9E-09 73.6 13.6 98 71-232 143-241 (311)
214 3hdq_A UDP-galactopyranose mut 97.9 6.6E-06 2.2E-10 84.8 5.5 42 69-110 27-68 (397)
215 2b9w_A Putative aminooxidase; 97.9 9.1E-06 3.1E-10 84.7 6.6 40 69-108 4-44 (424)
216 2cdu_A NADPH oxidase; flavoenz 97.9 7.4E-05 2.5E-09 78.6 13.6 99 71-232 149-247 (452)
217 3ab1_A Ferredoxin--NADP reduct 97.9 6.3E-05 2.2E-09 76.4 12.6 101 72-233 164-264 (360)
218 2a8x_A Dihydrolipoyl dehydroge 97.9 8.1E-05 2.8E-09 78.6 13.8 101 71-232 171-271 (464)
219 2jae_A L-amino acid oxidase; o 97.9 9.1E-06 3.1E-10 86.5 6.2 41 69-109 9-49 (489)
220 1rsg_A FMS1 protein; FAD bindi 97.9 5.1E-06 1.8E-10 89.2 4.3 40 69-108 6-46 (516)
221 1m6i_A Programmed cell death p 97.9 7E-06 2.4E-10 87.6 5.3 36 69-104 9-46 (493)
222 3f8d_A Thioredoxin reductase ( 97.9 0.0001 3.5E-09 73.2 13.6 106 70-240 153-260 (323)
223 2gqw_A Ferredoxin reductase; f 97.9 9.1E-05 3.1E-09 76.9 13.5 105 71-242 145-250 (408)
224 1v0j_A UDP-galactopyranose mut 97.9 7.2E-06 2.4E-10 85.0 5.0 41 70-110 6-47 (399)
225 1onf_A GR, grase, glutathione 97.9 9.1E-05 3.1E-09 79.1 13.7 101 71-233 176-276 (500)
226 3oc4_A Oxidoreductase, pyridin 97.9 8.8E-05 3E-09 78.1 13.3 98 71-232 147-244 (452)
227 2e1m_A L-glutamate oxidase; L- 97.9 1.1E-05 3.9E-10 82.4 6.0 40 69-108 42-82 (376)
228 1vdc_A NTR, NADPH dependent th 97.9 8.7E-05 3E-09 74.4 12.4 100 71-232 159-259 (333)
229 2wpf_A Trypanothione reductase 97.9 9.1E-05 3.1E-09 78.9 13.0 100 71-233 191-293 (495)
230 1xdi_A RV3303C-LPDA; reductase 97.9 9.5E-05 3.3E-09 78.9 13.1 100 71-234 182-281 (499)
231 1lvl_A Dihydrolipoamide dehydr 97.9 5.2E-05 1.8E-09 80.0 10.9 99 71-233 171-269 (458)
232 1zk7_A HGII, reductase, mercur 97.9 7.3E-05 2.5E-09 79.1 12.0 98 70-233 175-272 (467)
233 3iwa_A FAD-dependent pyridine 97.9 9.9E-05 3.4E-09 78.1 13.1 109 71-242 159-269 (472)
234 1s3e_A Amine oxidase [flavin-c 97.8 1.1E-05 3.7E-10 86.7 5.6 40 70-109 3-42 (520)
235 1fec_A Trypanothione reductase 97.8 8.6E-05 3E-09 79.0 12.5 100 71-233 187-289 (490)
236 1lqt_A FPRA; NADP+ derivative, 97.8 3.2E-06 1.1E-10 89.2 1.3 36 71-106 3-45 (456)
237 2ivd_A PPO, PPOX, protoporphyr 97.8 1.1E-05 3.9E-10 85.4 5.4 40 69-108 14-53 (478)
238 1cjc_A Protein (adrenodoxin re 97.8 6.2E-06 2.1E-10 87.1 3.3 38 69-106 4-43 (460)
239 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.0001 3.5E-09 79.1 12.6 96 72-231 356-452 (521)
240 3lad_A Dihydrolipoamide dehydr 97.8 0.00014 4.7E-09 77.1 13.4 101 70-231 179-279 (476)
241 3qfa_A Thioredoxin reductase 1 97.8 0.00028 9.5E-09 75.6 15.7 104 71-231 210-314 (519)
242 1i8t_A UDP-galactopyranose mut 97.8 1E-05 3.4E-10 82.9 4.2 39 71-109 1-39 (367)
243 4dsg_A UDP-galactopyranose mut 97.8 1.7E-05 5.7E-10 84.4 5.9 41 69-109 7-48 (484)
244 3r9u_A Thioredoxin reductase; 97.8 0.00013 4.3E-09 72.3 12.0 97 71-231 147-243 (315)
245 1ojt_A Surface protein; redox- 97.8 6.8E-05 2.3E-09 79.6 10.6 103 71-233 185-287 (482)
246 2bc0_A NADH oxidase; flavoprot 97.8 0.00011 3.8E-09 78.2 12.0 98 71-232 194-291 (490)
247 2vvm_A Monoamine oxidase N; FA 97.8 1.6E-05 5.3E-10 84.8 5.0 57 168-232 255-312 (495)
248 3ntd_A FAD-dependent pyridine 97.8 0.00022 7.7E-09 77.2 14.1 108 71-241 151-277 (565)
249 1sez_A Protoporphyrinogen oxid 97.7 2E-05 6.7E-10 84.2 5.5 39 70-108 12-50 (504)
250 3lzw_A Ferredoxin--NADP reduct 97.7 0.00018 6E-09 71.8 11.9 96 72-232 155-250 (332)
251 1m6i_A Programmed cell death p 97.7 0.00025 8.5E-09 75.5 12.9 107 72-241 181-292 (493)
252 2bi7_A UDP-galactopyranose mut 97.7 2.9E-05 9.8E-10 80.0 5.3 39 71-109 3-41 (384)
253 2a87_A TRXR, TR, thioredoxin r 97.7 0.00014 4.9E-09 73.0 10.4 97 71-232 155-252 (335)
254 4g6h_A Rotenone-insensitive NA 97.7 6.1E-05 2.1E-09 80.3 7.9 35 70-104 41-75 (502)
255 4b1b_A TRXR, thioredoxin reduc 97.6 0.00047 1.6E-08 74.0 14.4 97 69-230 221-317 (542)
256 1xhc_A NADH oxidase /nitrite r 97.6 0.00011 3.8E-09 75.1 8.7 100 72-241 144-244 (367)
257 3ics_A Coenzyme A-disulfide re 97.6 0.00034 1.2E-08 76.2 12.8 105 71-241 187-292 (588)
258 2iid_A L-amino-acid oxidase; f 97.6 3.8E-05 1.3E-09 81.9 5.0 39 70-108 32-70 (498)
259 3vrd_B FCCB subunit, flavocyto 97.6 3.9E-05 1.3E-09 79.3 4.7 32 73-104 4-37 (401)
260 2x8g_A Thioredoxin glutathione 97.6 0.00092 3.1E-08 72.9 15.8 102 72-232 287-395 (598)
261 3g5s_A Methylenetetrahydrofola 97.5 5.8E-05 2E-09 76.5 5.1 33 72-104 2-34 (443)
262 4a5l_A Thioredoxin reductase; 97.5 0.00056 1.9E-08 67.7 12.4 97 72-231 153-249 (314)
263 4g6h_A Rotenone-insensitive NA 97.5 0.00026 9E-09 75.4 9.3 99 73-233 219-333 (502)
264 1b37_A Protein (polyamine oxid 97.5 8.9E-05 3E-09 78.5 5.5 39 70-108 3-42 (472)
265 4eqs_A Coenzyme A disulfide re 97.5 0.00036 1.2E-08 73.0 10.1 93 71-231 147-239 (437)
266 2vdc_G Glutamate synthase [NAD 97.4 0.00025 8.5E-09 74.6 8.2 98 72-232 265-378 (456)
267 1cjc_A Protein (adrenodoxin re 97.4 0.00069 2.4E-08 71.3 11.1 52 181-233 270-334 (460)
268 3kd9_A Coenzyme A disulfide re 97.4 0.0006 2.1E-08 71.6 10.5 106 71-241 148-254 (449)
269 1gte_A Dihydropyrimidine dehyd 97.3 0.00085 2.9E-08 77.8 12.2 97 73-231 334-441 (1025)
270 1o94_A Tmadh, trimethylamine d 97.3 0.00018 6E-09 80.5 6.0 40 69-108 387-426 (729)
271 2z3y_A Lysine-specific histone 97.3 0.0002 6.7E-09 79.2 5.6 39 70-108 106-144 (662)
272 3l8k_A Dihydrolipoyl dehydroge 97.3 0.0015 5.1E-08 68.9 12.1 102 71-233 172-273 (466)
273 3d1c_A Flavin-containing putat 97.2 0.0017 5.8E-08 65.8 11.9 106 72-233 167-273 (369)
274 2xag_A Lysine-specific histone 97.2 0.00024 8.2E-09 80.1 5.8 39 70-108 277-315 (852)
275 2gag_A Heterotetrameric sarcos 97.2 0.00092 3.1E-08 77.0 10.0 94 72-231 285-382 (965)
276 1lqt_A FPRA; NADP+ derivative, 97.0 0.0019 6.4E-08 67.9 9.4 50 181-233 265-327 (456)
277 3klj_A NAD(FAD)-dependent dehy 97.0 0.00033 1.1E-08 72.0 3.5 86 72-233 147-232 (385)
278 1gte_A Dihydropyrimidine dehyd 97.0 0.00058 2E-08 79.2 5.8 38 71-108 187-225 (1025)
279 4gcm_A TRXR, thioredoxin reduc 96.9 0.0072 2.5E-07 59.6 12.8 98 72-232 146-243 (312)
280 1vg0_A RAB proteins geranylger 96.8 0.0011 3.8E-08 72.0 5.6 57 168-229 378-434 (650)
281 1o94_A Tmadh, trimethylamine d 96.7 0.0026 8.7E-08 71.0 8.3 33 72-104 529-563 (729)
282 3ayj_A Pro-enzyme of L-phenyla 96.7 0.0006 2.1E-08 75.0 2.8 34 71-104 56-97 (721)
283 3fbs_A Oxidoreductase; structu 96.6 0.0056 1.9E-07 59.6 9.2 85 71-231 141-225 (297)
284 2pq4_B Periplasmic nitrate red 96.4 0.0012 4.2E-08 41.9 1.8 18 1-18 3-20 (35)
285 3uox_A Otemo; baeyer-villiger 96.0 0.0046 1.6E-07 66.4 4.7 33 72-104 186-218 (545)
286 3gwf_A Cyclohexanone monooxyge 95.7 0.023 7.8E-07 60.9 8.7 34 71-104 178-211 (540)
287 3h28_A Sulfide-quinone reducta 95.6 0.045 1.6E-06 56.7 10.1 53 173-233 205-257 (430)
288 2g1u_A Hypothetical protein TM 95.1 0.023 7.9E-07 49.8 5.4 35 70-104 18-52 (155)
289 3sx6_A Sulfide-quinone reducta 95.1 0.11 3.6E-06 54.0 11.3 52 173-231 213-268 (437)
290 3h8l_A NADH oxidase; membrane 95.0 0.099 3.4E-06 53.6 10.5 55 171-237 221-275 (409)
291 1lss_A TRK system potassium up 94.8 0.028 9.7E-07 47.8 4.9 32 72-103 5-36 (140)
292 3fwz_A Inner membrane protein 94.7 0.04 1.4E-06 47.4 5.7 34 71-104 7-40 (140)
293 3llv_A Exopolyphosphatase-rela 94.7 0.033 1.1E-06 47.8 5.1 32 72-103 7-38 (141)
294 3ic5_A Putative saccharopine d 94.6 0.033 1.1E-06 45.8 4.7 32 72-103 6-38 (118)
295 1id1_A Putative potassium chan 94.2 0.06 2.1E-06 46.9 5.6 32 72-103 4-35 (153)
296 3ado_A Lambda-crystallin; L-gu 94.1 0.041 1.4E-06 54.5 4.8 32 72-103 7-38 (319)
297 4fk1_A Putative thioredoxin re 94.0 0.11 3.8E-06 50.8 7.7 90 71-232 146-236 (304)
298 4a9w_A Monooxygenase; baeyer-v 93.8 0.071 2.4E-06 53.0 6.1 33 71-104 163-195 (357)
299 1f0y_A HCDH, L-3-hydroxyacyl-C 93.5 0.072 2.4E-06 52.3 5.3 31 73-103 17-47 (302)
300 2hmt_A YUAA protein; RCK, KTN, 93.3 0.072 2.4E-06 45.4 4.5 31 73-103 8-38 (144)
301 3hyw_A Sulfide-quinone reducta 93.0 0.72 2.5E-05 47.5 12.3 60 173-240 205-264 (430)
302 3c85_A Putative glutathione-re 92.8 0.1 3.6E-06 46.9 5.0 33 71-103 39-72 (183)
303 4b63_A L-ornithine N5 monooxyg 92.7 1.6 5.5E-05 45.9 14.8 33 72-104 247-281 (501)
304 3l4b_C TRKA K+ channel protien 92.6 0.11 3.6E-06 48.3 4.8 32 73-104 2-33 (218)
305 4e12_A Diketoreductase; oxidor 92.5 0.1 3.5E-06 50.7 4.8 32 72-103 5-36 (283)
306 2dpo_A L-gulonate 3-dehydrogen 92.3 0.11 3.9E-06 51.4 4.8 32 72-103 7-38 (319)
307 1pzg_A LDH, lactate dehydrogen 92.0 0.13 4.5E-06 51.2 4.8 35 69-103 7-42 (331)
308 3g0o_A 3-hydroxyisobutyrate de 91.7 0.15 5.1E-06 50.1 4.9 34 70-103 6-39 (303)
309 3k6j_A Protein F01G10.3, confi 91.5 0.071 2.4E-06 55.5 2.3 33 72-104 55-87 (460)
310 3k96_A Glycerol-3-phosphate de 91.4 0.18 6.2E-06 50.7 5.2 35 69-103 27-61 (356)
311 3i83_A 2-dehydropantoate 2-red 91.3 0.17 5.8E-06 50.1 4.8 32 72-103 3-34 (320)
312 3hn2_A 2-dehydropantoate 2-red 91.1 0.17 5.9E-06 49.8 4.6 32 72-103 3-34 (312)
313 3dfz_A SIRC, precorrin-2 dehyd 90.9 0.19 6.6E-06 46.8 4.5 34 70-103 30-63 (223)
314 3ic9_A Dihydrolipoamide dehydr 90.9 0.18 6E-06 53.3 4.7 34 71-104 174-207 (492)
315 1lld_A L-lactate dehydrogenase 90.8 0.2 7E-06 49.4 4.9 32 72-103 8-41 (319)
316 1kyq_A Met8P, siroheme biosynt 90.8 0.12 4.1E-06 49.8 3.1 34 70-103 12-45 (274)
317 2y0c_A BCEC, UDP-glucose dehyd 90.7 0.2 6.9E-06 52.6 4.9 34 70-103 7-40 (478)
318 1zej_A HBD-9, 3-hydroxyacyl-CO 90.6 0.21 7.2E-06 48.7 4.6 32 71-103 12-43 (293)
319 3tl2_A Malate dehydrogenase; c 90.5 0.27 9.3E-06 48.5 5.4 34 70-103 7-41 (315)
320 3ghy_A Ketopantoate reductase 90.5 0.25 8.4E-06 49.3 5.1 32 72-103 4-35 (335)
321 2raf_A Putative dinucleotide-b 90.5 0.25 8.6E-06 45.6 4.9 34 71-104 19-52 (209)
322 4dio_A NAD(P) transhydrogenase 90.4 0.23 7.9E-06 50.6 4.9 34 71-104 190-223 (405)
323 3lk7_A UDP-N-acetylmuramoylala 90.4 0.24 8.4E-06 51.5 5.2 34 71-104 9-42 (451)
324 1ks9_A KPA reductase;, 2-dehyd 90.3 0.25 8.5E-06 47.8 4.9 32 73-104 2-33 (291)
325 1jw9_B Molybdopterin biosynthe 90.1 0.21 7.2E-06 47.5 4.1 34 72-105 32-66 (249)
326 1zcj_A Peroxisomal bifunctiona 90.1 0.22 7.5E-06 52.1 4.6 31 73-103 39-69 (463)
327 2xve_A Flavin-containing monoo 90.1 0.22 7.6E-06 52.1 4.6 34 71-104 197-230 (464)
328 2qyt_A 2-dehydropantoate 2-red 90.0 0.17 5.8E-06 49.8 3.5 34 69-102 6-45 (317)
329 3mog_A Probable 3-hydroxybutyr 90.0 0.28 9.7E-06 51.4 5.3 33 72-104 6-38 (483)
330 2x5o_A UDP-N-acetylmuramoylala 89.7 0.23 8E-06 51.5 4.4 34 72-105 6-39 (439)
331 1y6j_A L-lactate dehydrogenase 89.7 0.32 1.1E-05 48.1 5.1 34 70-103 6-41 (318)
332 2ew2_A 2-dehydropantoate 2-red 89.6 0.28 9.7E-06 48.0 4.8 32 72-103 4-35 (316)
333 3g17_A Similar to 2-dehydropan 89.6 0.22 7.5E-06 48.6 3.9 32 72-103 3-34 (294)
334 2gv8_A Monooxygenase; FMO, FAD 89.6 0.23 7.8E-06 51.6 4.2 34 71-104 212-246 (447)
335 2hjr_A Malate dehydrogenase; m 89.6 0.3 1E-05 48.5 4.9 32 72-103 15-47 (328)
336 3l9w_A Glutathione-regulated p 89.6 0.33 1.1E-05 49.9 5.3 34 71-104 4-37 (413)
337 2a9f_A Putative malic enzyme ( 89.3 0.28 9.6E-06 49.5 4.4 35 70-104 187-222 (398)
338 2v6b_A L-LDH, L-lactate dehydr 89.3 0.32 1.1E-05 47.7 4.8 31 73-103 2-34 (304)
339 1trb_A Thioredoxin reductase; 89.1 0.26 8.7E-06 48.3 4.0 34 71-104 145-178 (320)
340 2ewd_A Lactate dehydrogenase,; 89.1 0.31 1.1E-05 48.1 4.6 33 72-104 5-38 (317)
341 3p2y_A Alanine dehydrogenase/p 89.1 0.26 8.9E-06 49.7 4.0 34 71-104 184-217 (381)
342 3gg2_A Sugar dehydrogenase, UD 89.1 0.31 1.1E-05 50.7 4.7 32 72-103 3-34 (450)
343 1h6d_A Precursor form of gluco 89.0 0.21 7.3E-06 51.7 3.4 35 69-103 81-118 (433)
344 4a7p_A UDP-glucose dehydrogena 88.9 0.36 1.2E-05 50.1 5.0 35 70-104 7-41 (446)
345 3oj0_A Glutr, glutamyl-tRNA re 88.8 0.16 5.4E-06 43.7 1.9 33 71-103 21-53 (144)
346 3urh_A Dihydrolipoyl dehydroge 88.8 0.27 9.2E-06 51.8 4.1 34 71-104 198-231 (491)
347 2vns_A Metalloreductase steap3 88.7 0.45 1.5E-05 44.0 5.2 32 72-103 29-60 (215)
348 3dk9_A Grase, GR, glutathione 88.7 0.34 1.2E-05 50.8 4.8 34 71-104 187-220 (478)
349 4g65_A TRK system potassium up 88.7 0.19 6.6E-06 52.5 2.8 33 72-104 4-36 (461)
350 3g79_A NDP-N-acetyl-D-galactos 88.6 0.37 1.3E-05 50.4 4.9 34 71-104 18-53 (478)
351 3doj_A AT3G25530, dehydrogenas 88.5 0.45 1.6E-05 46.7 5.3 35 70-104 20-54 (310)
352 1bg6_A N-(1-D-carboxylethyl)-L 88.5 0.39 1.3E-05 48.0 4.9 32 72-103 5-36 (359)
353 1pjc_A Protein (L-alanine dehy 88.5 0.4 1.4E-05 48.3 4.9 32 72-103 168-199 (361)
354 3ego_A Probable 2-dehydropanto 88.4 0.38 1.3E-05 47.2 4.7 31 72-103 3-33 (307)
355 1vl6_A Malate oxidoreductase; 88.3 0.37 1.3E-05 48.6 4.4 34 70-103 191-225 (388)
356 3pqe_A L-LDH, L-lactate dehydr 88.3 0.39 1.3E-05 47.6 4.6 34 70-103 4-39 (326)
357 4ap3_A Steroid monooxygenase; 88.2 0.3 1E-05 52.3 3.9 33 72-104 192-224 (549)
358 2eez_A Alanine dehydrogenase; 88.1 0.43 1.5E-05 48.2 4.9 32 72-103 167-198 (369)
359 1x13_A NAD(P) transhydrogenase 88.1 0.4 1.4E-05 49.0 4.8 33 72-104 173-205 (401)
360 3dtt_A NADP oxidoreductase; st 88.1 0.49 1.7E-05 44.7 5.1 34 70-103 18-51 (245)
361 3l6d_A Putative oxidoreductase 88.1 0.53 1.8E-05 46.2 5.5 33 71-103 9-41 (306)
362 1t2d_A LDH-P, L-lactate dehydr 88.0 0.45 1.5E-05 47.1 4.9 32 72-103 5-37 (322)
363 1nyt_A Shikimate 5-dehydrogena 87.9 0.46 1.6E-05 45.7 4.8 33 71-103 119-151 (271)
364 3ktd_A Prephenate dehydrogenas 87.9 0.54 1.8E-05 46.9 5.4 33 71-103 8-40 (341)
365 3pid_A UDP-glucose 6-dehydroge 87.9 0.42 1.4E-05 49.3 4.7 33 70-103 35-67 (432)
366 3e8x_A Putative NAD-dependent 87.9 0.52 1.8E-05 43.9 5.0 33 71-103 21-54 (236)
367 1z82_A Glycerol-3-phosphate de 87.9 0.46 1.6E-05 47.2 4.9 33 71-103 14-46 (335)
368 3hwr_A 2-dehydropantoate 2-red 87.8 0.44 1.5E-05 47.0 4.7 32 71-103 19-50 (318)
369 3vtf_A UDP-glucose 6-dehydroge 87.7 0.41 1.4E-05 49.4 4.5 34 70-103 20-53 (444)
370 3pef_A 6-phosphogluconate dehy 87.7 0.49 1.7E-05 45.8 4.9 32 73-104 3-34 (287)
371 1mv8_A GMD, GDP-mannose 6-dehy 87.7 0.39 1.3E-05 49.7 4.4 31 73-103 2-32 (436)
372 2vvm_A Monoamine oxidase N; FA 87.5 0.98 3.3E-05 47.3 7.5 39 70-108 38-76 (495)
373 2uyy_A N-PAC protein; long-cha 87.3 0.65 2.2E-05 45.6 5.6 32 72-103 31-62 (316)
374 3dfu_A Uncharacterized protein 87.2 0.2 6.9E-06 47.0 1.6 34 70-103 5-38 (232)
375 1l7d_A Nicotinamide nucleotide 87.2 0.52 1.8E-05 47.9 4.9 34 71-104 172-205 (384)
376 2vhw_A Alanine dehydrogenase; 87.0 0.54 1.9E-05 47.6 4.9 32 72-103 169-200 (377)
377 1guz_A Malate dehydrogenase; o 86.9 0.57 1.9E-05 46.1 4.9 32 73-104 2-35 (310)
378 1jay_A Coenzyme F420H2:NADP+ o 86.9 0.58 2E-05 42.9 4.7 31 73-103 2-33 (212)
379 4dll_A 2-hydroxy-3-oxopropiona 86.9 0.55 1.9E-05 46.4 4.8 33 71-103 31-63 (320)
380 1vg0_A RAB proteins geranylger 86.8 1.7 5.8E-05 47.1 8.9 39 70-108 7-45 (650)
381 1txg_A Glycerol-3-phosphate de 86.7 0.44 1.5E-05 47.2 4.0 30 73-102 2-31 (335)
382 3qha_A Putative oxidoreductase 86.7 0.47 1.6E-05 46.3 4.1 33 72-104 16-48 (296)
383 3ond_A Adenosylhomocysteinase; 86.6 0.56 1.9E-05 48.9 4.8 32 72-103 266-297 (488)
384 1ur5_A Malate dehydrogenase; o 86.6 0.61 2.1E-05 45.8 4.9 32 72-103 3-35 (309)
385 2hu9_A MERP, mercuric transpor 86.4 0.43 1.5E-05 40.1 3.1 46 473-522 75-125 (130)
386 2wtb_A MFP2, fatty acid multif 86.3 0.51 1.7E-05 52.2 4.6 32 73-104 314-345 (725)
387 1a5z_A L-lactate dehydrogenase 86.3 0.49 1.7E-05 46.7 4.1 31 73-103 2-34 (319)
388 3zwc_A Peroxisomal bifunctiona 86.3 0.52 1.8E-05 52.1 4.6 33 72-104 317-349 (742)
389 3ggo_A Prephenate dehydrogenas 86.2 0.76 2.6E-05 45.2 5.4 32 72-103 34-67 (314)
390 3qsg_A NAD-binding phosphogluc 86.2 0.5 1.7E-05 46.5 4.0 33 71-103 24-57 (312)
391 3dgh_A TRXR-1, thioredoxin red 86.1 0.63 2.2E-05 48.8 5.0 34 71-104 187-220 (483)
392 3eag_A UDP-N-acetylmuramate:L- 86.0 0.71 2.4E-05 45.7 5.1 33 72-104 5-38 (326)
393 3rui_A Ubiquitin-like modifier 86.0 1 3.4E-05 44.7 6.0 36 71-106 34-70 (340)
394 3gvi_A Malate dehydrogenase; N 86.0 0.76 2.6E-05 45.5 5.2 34 71-104 7-41 (324)
395 2h78_A Hibadh, 3-hydroxyisobut 85.9 0.59 2E-05 45.6 4.4 32 72-103 4-35 (302)
396 1vpd_A Tartronate semialdehyde 85.9 0.59 2E-05 45.4 4.4 32 72-103 6-37 (299)
397 3ew7_A LMO0794 protein; Q8Y8U8 85.8 0.8 2.8E-05 41.8 5.0 31 73-103 2-33 (221)
398 2f1k_A Prephenate dehydrogenas 85.7 0.71 2.4E-05 44.4 4.8 31 73-103 2-32 (279)
399 1zud_1 Adenylyltransferase THI 85.6 0.72 2.4E-05 43.8 4.7 35 71-105 28-63 (251)
400 3h2s_A Putative NADH-flavin re 85.6 0.79 2.7E-05 42.1 4.9 31 73-103 2-33 (224)
401 4ffl_A PYLC; amino acid, biosy 85.5 0.92 3.1E-05 45.5 5.7 32 73-104 3-34 (363)
402 3pdu_A 3-hydroxyisobutyrate de 85.4 0.54 1.8E-05 45.5 3.8 32 73-104 3-34 (287)
403 3c24_A Putative oxidoreductase 85.3 0.88 3E-05 44.0 5.3 32 72-103 12-44 (286)
404 2egg_A AROE, shikimate 5-dehyd 85.3 0.7 2.4E-05 45.1 4.6 33 71-103 141-174 (297)
405 4e21_A 6-phosphogluconate dehy 85.3 0.75 2.6E-05 46.2 4.9 33 71-103 22-54 (358)
406 2pv7_A T-protein [includes: ch 85.3 0.72 2.5E-05 45.0 4.6 32 73-104 23-55 (298)
407 3phh_A Shikimate dehydrogenase 85.2 0.8 2.7E-05 43.9 4.8 33 71-103 118-150 (269)
408 1wdk_A Fatty oxidation complex 85.1 0.6 2.1E-05 51.5 4.4 33 72-104 315-347 (715)
409 1evy_A Glycerol-3-phosphate de 85.1 0.44 1.5E-05 48.0 3.0 31 73-103 17-47 (366)
410 3gpi_A NAD-dependent epimerase 85.0 0.98 3.3E-05 43.4 5.4 33 72-104 4-36 (286)
411 1dlj_A UDP-glucose dehydrogena 84.9 0.57 1.9E-05 47.9 3.9 30 73-103 2-31 (402)
412 2p4q_A 6-phosphogluconate dehy 84.9 0.9 3.1E-05 47.8 5.4 35 70-104 9-43 (497)
413 3p7m_A Malate dehydrogenase; p 84.9 0.96 3.3E-05 44.6 5.3 34 71-104 5-39 (321)
414 3o0h_A Glutathione reductase; 84.8 0.74 2.5E-05 48.2 4.8 34 71-104 191-224 (484)
415 2zyd_A 6-phosphogluconate dehy 84.8 0.79 2.7E-05 48.0 4.9 34 70-103 14-47 (480)
416 4ezb_A Uncharacterized conserv 84.7 0.75 2.6E-05 45.3 4.5 33 72-104 25-58 (317)
417 1pjq_A CYSG, siroheme synthase 84.7 0.74 2.5E-05 47.9 4.7 33 71-103 12-44 (457)
418 1hyh_A L-hicdh, L-2-hydroxyiso 84.7 0.65 2.2E-05 45.6 4.0 31 73-103 3-35 (309)
419 1p77_A Shikimate 5-dehydrogena 84.7 0.64 2.2E-05 44.7 3.9 33 71-103 119-151 (272)
420 4dna_A Probable glutathione re 84.7 0.76 2.6E-05 47.8 4.8 35 70-104 169-203 (463)
421 3h8v_A Ubiquitin-like modifier 84.6 0.73 2.5E-05 44.8 4.3 35 71-105 36-71 (292)
422 2i6t_A Ubiquitin-conjugating e 84.6 0.7 2.4E-05 45.2 4.2 33 72-104 15-49 (303)
423 4huj_A Uncharacterized protein 84.5 0.57 1.9E-05 43.5 3.3 32 72-103 24-56 (220)
424 2g5c_A Prephenate dehydrogenas 84.2 0.88 3E-05 43.8 4.7 31 73-103 3-35 (281)
425 3vps_A TUNA, NAD-dependent epi 84.2 0.96 3.3E-05 44.0 5.0 34 71-104 7-41 (321)
426 4gwg_A 6-phosphogluconate dehy 84.2 1 3.5E-05 47.1 5.4 34 71-104 4-37 (484)
427 2pgd_A 6-phosphogluconate dehy 84.1 0.96 3.3E-05 47.4 5.3 32 72-103 3-34 (482)
428 1yqg_A Pyrroline-5-carboxylate 84.1 0.75 2.6E-05 43.7 4.1 31 73-103 2-33 (263)
429 3ius_A Uncharacterized conserv 84.1 0.77 2.6E-05 44.0 4.2 32 72-103 6-37 (286)
430 1edz_A 5,10-methylenetetrahydr 84.0 0.74 2.5E-05 45.3 4.0 34 70-103 176-210 (320)
431 2rir_A Dipicolinate synthase, 84.0 0.97 3.3E-05 44.1 4.9 33 71-103 157-189 (300)
432 1oju_A MDH, malate dehydrogena 84.0 0.74 2.5E-05 44.8 4.0 31 73-103 2-34 (294)
433 2gf2_A Hibadh, 3-hydroxyisobut 83.9 0.92 3.1E-05 43.9 4.7 31 73-103 2-32 (296)
434 1pgj_A 6PGDH, 6-PGDH, 6-phosph 83.9 0.92 3.1E-05 47.5 5.0 31 73-103 3-33 (478)
435 3d4o_A Dipicolinate synthase s 83.9 1 3.4E-05 43.8 4.9 33 71-103 155-187 (293)
436 1hdo_A Biliverdin IX beta redu 83.8 1.1 3.7E-05 40.4 4.9 33 72-104 4-37 (206)
437 3ojo_A CAP5O; rossmann fold, c 83.8 0.81 2.8E-05 47.1 4.4 32 72-103 12-43 (431)
438 3u62_A Shikimate dehydrogenase 83.7 1.1 3.7E-05 42.6 4.9 31 73-103 110-141 (253)
439 3tnl_A Shikimate dehydrogenase 83.7 1 3.6E-05 44.2 4.9 33 71-103 154-187 (315)
440 2aef_A Calcium-gated potassium 83.6 0.44 1.5E-05 44.6 2.2 32 72-104 10-41 (234)
441 4aj2_A L-lactate dehydrogenase 83.5 1.1 3.8E-05 44.3 5.2 34 70-103 18-53 (331)
442 3cky_A 2-hydroxymethyl glutara 83.5 0.91 3.1E-05 44.1 4.5 32 72-103 5-36 (301)
443 1nvt_A Shikimate 5'-dehydrogen 83.5 0.71 2.4E-05 44.8 3.7 32 71-103 128-159 (287)
444 3ldh_A Lactate dehydrogenase; 83.4 0.8 2.7E-05 45.3 4.0 32 72-103 22-55 (330)
445 1leh_A Leucine dehydrogenase; 83.3 1 3.4E-05 45.3 4.8 33 71-103 173-205 (364)
446 3jyo_A Quinate/shikimate dehyd 83.1 1.1 3.7E-05 43.4 4.8 34 70-103 126-160 (283)
447 3tri_A Pyrroline-5-carboxylate 83.0 1.4 4.7E-05 42.5 5.5 33 72-104 4-39 (280)
448 3don_A Shikimate dehydrogenase 82.9 0.88 3E-05 43.9 4.0 33 71-103 117-150 (277)
449 2rcy_A Pyrroline carboxylate r 82.9 1 3.5E-05 42.7 4.5 33 72-104 5-41 (262)
450 3d0o_A L-LDH 1, L-lactate dehy 82.9 0.99 3.4E-05 44.5 4.5 34 70-103 5-40 (317)
451 2hk9_A Shikimate dehydrogenase 82.9 0.89 3E-05 43.8 4.1 32 72-103 130-161 (275)
452 3d1l_A Putative NADP oxidoredu 82.8 0.85 2.9E-05 43.5 3.9 32 72-103 11-43 (266)
453 2cvz_A Dehydrogenase, 3-hydrox 82.8 0.9 3.1E-05 43.8 4.1 30 73-103 3-32 (289)
454 3d3w_A L-xylulose reductase; u 82.7 1.4 4.8E-05 41.1 5.3 32 72-103 8-40 (244)
455 3nep_X Malate dehydrogenase; h 82.7 0.94 3.2E-05 44.6 4.2 32 73-104 2-35 (314)
456 3c7a_A Octopine dehydrogenase; 82.4 0.67 2.3E-05 47.3 3.2 29 73-101 4-33 (404)
457 1ldn_A L-lactate dehydrogenase 82.4 1.1 3.7E-05 44.1 4.6 33 71-103 6-40 (316)
458 3o38_A Short chain dehydrogena 82.3 0.91 3.1E-05 43.1 3.9 32 72-103 23-56 (266)
459 2iz1_A 6-phosphogluconate dehy 82.2 1.3 4.5E-05 46.2 5.4 32 72-103 6-37 (474)
460 1lu9_A Methylene tetrahydromet 82.1 1.3 4.4E-05 42.8 4.9 32 72-103 120-152 (287)
461 3ce6_A Adenosylhomocysteinase; 82.1 1.1 3.9E-05 46.8 4.8 33 71-103 274-306 (494)
462 3ruf_A WBGU; rossmann fold, UD 82.0 1.2 4.1E-05 44.1 4.8 35 70-104 24-59 (351)
463 1yj8_A Glycerol-3-phosphate de 82.0 0.78 2.7E-05 46.3 3.5 33 72-104 22-61 (375)
464 1x0v_A GPD-C, GPDH-C, glycerol 81.9 0.69 2.4E-05 46.2 3.0 33 72-104 9-48 (354)
465 3vku_A L-LDH, L-lactate dehydr 81.9 1.1 3.9E-05 44.1 4.5 34 70-103 8-43 (326)
466 2izz_A Pyrroline-5-carboxylate 81.9 1.3 4.3E-05 43.7 4.9 33 71-103 22-58 (322)
467 1np3_A Ketol-acid reductoisome 81.8 1.3 4.4E-05 44.1 4.9 32 72-103 17-48 (338)
468 3gt0_A Pyrroline-5-carboxylate 81.6 1.4 4.7E-05 41.5 4.8 32 72-103 3-38 (247)
469 2o3j_A UDP-glucose 6-dehydroge 81.6 0.85 2.9E-05 47.8 3.6 32 72-103 10-43 (481)
470 2d5c_A AROE, shikimate 5-dehyd 81.6 1.3 4.6E-05 42.1 4.8 31 73-103 118-148 (263)
471 4gsl_A Ubiquitin-like modifier 81.6 1.7 5.6E-05 46.5 5.8 36 71-106 326-362 (615)
472 2dkn_A 3-alpha-hydroxysteroid 81.6 1.5 5E-05 41.0 5.1 32 73-104 3-35 (255)
473 3fbt_A Chorismate mutase and s 81.6 1.3 4.3E-05 42.9 4.6 33 71-103 122-155 (282)
474 1y8q_A Ubiquitin-like 1 activa 81.5 1.4 4.7E-05 44.0 4.9 36 71-106 36-72 (346)
475 3oig_A Enoyl-[acyl-carrier-pro 81.5 1.6 5.5E-05 41.4 5.3 32 72-103 8-42 (266)
476 3pwz_A Shikimate dehydrogenase 81.4 1.4 4.7E-05 42.4 4.8 33 71-103 120-153 (272)
477 3fi9_A Malate dehydrogenase; s 81.4 1.5 5E-05 43.7 5.1 33 71-103 8-43 (343)
478 3o8q_A Shikimate 5-dehydrogena 81.4 1.4 4.6E-05 42.7 4.7 33 71-103 126-159 (281)
479 3r6d_A NAD-dependent epimerase 81.3 1.5 5.2E-05 40.2 4.9 30 74-103 8-39 (221)
480 3gvp_A Adenosylhomocysteinase 81.2 1.3 4.6E-05 45.2 4.8 33 71-103 220-252 (435)
481 4gx0_A TRKA domain protein; me 81.2 1.4 4.7E-05 47.2 5.2 33 72-104 349-381 (565)
482 3vh1_A Ubiquitin-like modifier 81.1 1.8 6.1E-05 46.2 5.8 36 71-106 327-363 (598)
483 1cyd_A Carbonyl reductase; sho 81.0 1.9 6.4E-05 40.1 5.5 32 72-103 8-40 (244)
484 2q3e_A UDP-glucose 6-dehydroge 80.9 0.93 3.2E-05 47.3 3.6 32 72-103 6-39 (467)
485 3h5n_A MCCB protein; ubiquitin 80.8 1.3 4.5E-05 44.3 4.5 35 71-105 118-153 (353)
486 1i36_A Conserved hypothetical 80.6 1.2 4.1E-05 42.3 4.0 30 73-102 2-31 (264)
487 3dhn_A NAD-dependent epimerase 80.4 1.3 4.5E-05 40.7 4.1 33 72-104 5-38 (227)
488 3t4e_A Quinate/shikimate dehyd 80.3 1.6 5.6E-05 42.7 4.9 33 71-103 148-181 (312)
489 2qrj_A Saccharopine dehydrogen 80.1 1.6 5.6E-05 44.0 4.9 35 70-104 213-251 (394)
490 1b8p_A Protein (malate dehydro 80.0 1.2 4E-05 44.2 3.9 34 70-103 4-45 (329)
491 1a4i_A Methylenetetrahydrofola 80.0 1.8 6E-05 42.0 4.9 34 70-103 164-198 (301)
492 3tpc_A Short chain alcohol deh 79.9 2.1 7.2E-05 40.4 5.5 34 71-104 7-41 (257)
493 4b4o_A Epimerase family protei 79.9 1.7 5.9E-05 41.9 5.0 32 73-104 2-34 (298)
494 2d4a_B Malate dehydrogenase; a 79.6 1.4 4.6E-05 43.3 4.1 30 74-103 2-32 (308)
495 4id9_A Short-chain dehydrogena 79.4 1.9 6.3E-05 42.6 5.1 34 71-104 19-53 (347)
496 2pd4_A Enoyl-[acyl-carrier-pro 79.4 1.7 5.7E-05 41.6 4.6 32 73-104 8-42 (275)
497 1gpj_A Glutamyl-tRNA reductase 79.2 1.3 4.5E-05 45.2 4.0 33 71-103 167-200 (404)
498 3q2o_A Phosphoribosylaminoimid 79.1 1.8 6.2E-05 43.8 5.1 33 72-104 15-47 (389)
499 2ahr_A Putative pyrroline carb 79.1 1.5 5E-05 41.6 4.1 32 72-103 4-35 (259)
500 1tt5_B Ubiquitin-activating en 79.0 2.1 7.1E-05 44.1 5.4 35 71-105 40-75 (434)
No 1
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=100.00 E-value=2.7e-64 Score=549.81 Aligned_cols=478 Identities=31% Similarity=0.473 Sum_probs=369.8
Q ss_pred CchHHHHHHHHhhcCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccC-
Q 008503 54 PSRVVQESALIAANNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLD- 132 (563)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~- 132 (563)
..|...+..+. +.+|||+|||||++|+++|+.|+++|++|+|||++++++|+|+++++++|+|++|+.+....+.
T Consensus 5 ~~r~~~~~~m~----~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~ 80 (561)
T 3da1_A 5 KKRDKCIGEMS----EKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVA 80 (561)
T ss_dssp TCHHHHHHHHT----TSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC--------------
T ss_pred hHHHHHHHhcc----CCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHH
Confidence 45666666665 6789999999999999999999999999999999999999999999999999998764211100
Q ss_pred -------------------------cc---cHH--------HHHHHHHHhh------h------------cccCCcceEE
Q 008503 133 -------------------------YG---QLK--------LVFHALEERK------Q------------AKDRSLKGAV 158 (563)
Q Consensus 133 -------------------------~~---~~~--------~~~~~l~~~~------~------------~~~~~~~~~~ 158 (563)
.. .+. .+++.+.... . +....+.+++
T Consensus 81 e~~~e~~~l~~~ap~l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~ 160 (561)
T 3da1_A 81 EVGKERAIVYENAPHVTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGG 160 (561)
T ss_dssp -CHHHHHHHHHHCTTTCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEE
T ss_pred HHHHHHHHHHHhCchhccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEE
Confidence 00 000 0011111000 0 0123356677
Q ss_pred EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhh
Q 008503 159 VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKL 238 (563)
Q Consensus 159 ~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~ 238 (563)
.+.+++++|.+++..+++.+.++|++++++++|+++..++ +++++|.+.+..+|+..+++|+.||||+|+|++.+.++
T Consensus 161 ~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~ 238 (561)
T 3da1_A 161 IYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREK 238 (561)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHT
T ss_pred EecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHh
Confidence 7788899999999999999999999999999999999875 68999999886677778899999999999999999999
Q ss_pred hcCCCCCeeecCCceEEEecCCcCCCCcccccccCCCCcEEEEeecCCcEEeeecCCC-CCCCCCCCCCHHHHHHHHHHH
Q 008503 239 ADQNVQPMICPSSGVHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSD-TVITLLPEPHEDEIQFILDAI 317 (563)
Q Consensus 239 ~g~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~g~~~iG~t~~~-~~~~~~~~~~~~~~~~ll~~~ 317 (563)
.|...+..+.|.+|++++++....+....++++...+|+++|++|++|.+++|+|+++ ..++.++.++.++++++++.+
T Consensus 239 ~g~~~~~~v~p~kG~~lvl~~~~~~~~~~~~~~~~~dgr~v~~iP~~g~~~iGtT~~~~~~~~~~~~~t~~~i~~ll~~~ 318 (561)
T 3da1_A 239 DRSKHGKYLKLSKGVHLVVDQSRFPLRQAVYFDTESDGRMIFAIPREGKTYIGTTDTFYDKDIASPRMTVEDRDYILAAA 318 (561)
T ss_dssp TTCCCSSEEEEEEEEEEEEEGGGSCCSSEEEECCSSSCCCEEEEEETTEEEECCCCEEECSCTTCCCCCHHHHHHHHHHH
T ss_pred cCCCCCceEEeccEEEEEECCccCCCceEEEeccCCCCcEEEEEecCCCEEEcCCCCccCCCcCCCCCCHHHHHHHHHHH
Confidence 8876445699999999999876555455555542268888999999989999999865 344567889999999999999
Q ss_pred hhhccCCCC--CCCcccceeeeeecccCCCCCCCCCccccceEeecCCCeEEEecChhhhhHHHHHHHHHHHHHcCCCCC
Q 008503 318 SDYLNVKVR--RTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTITGGKWTTYRSMAEDAVNAAIKSGKLNP 395 (563)
Q Consensus 318 ~~~~~~~l~--~~~v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~~~gl~~~~Gg~~t~a~~~Ae~v~~~i~~~~~~~~ 395 (563)
+++| |.+. ..+|+..|+|+||++.++. .++..++|+|.|..+.+|+++++|||||++|.|||++++.+.+.++.
T Consensus 319 ~~~~-P~l~~~~~~v~~~~aGlRPl~~~~~-~~~~~~sR~~~i~~~~~gli~i~Ggk~Tt~r~mAe~~~d~~~~~~~~-- 394 (561)
T 3da1_A 319 NYMF-PSLRLTADDVESSWAGLRPLIHEEG-KKASEISRKDEIFFSDSGLISIAGGKLTGYRKMAERTVDAVAQGLNV-- 394 (561)
T ss_dssp HHHC-TTCCCCTTTEEEEEEEEEEEEEC------------CCEEECSSCCEEECCCCSTTHHHHHHHHHHHHHHHHTC--
T ss_pred HHhC-CCCCCChhhEEEEeEEeccccCCCC-CCccccccceEEEecCCCeEEEeCChhhhHHHHHHHHHHHHHHhcCC--
Confidence 9999 5554 7889999999999987753 46677889999888778999999999999999999999999998764
Q ss_pred CCCCccccccccCCCC-CCcchHHHHHHHHhhhhhccCCCccCCCCCHHHHHHHHHHhCCcHHHHHHHHhccCCCCcccc
Q 008503 396 SNGCLTQNLRLVGGDG-WDPSSFTVLAQQYVRMKRTYGGKFVPGVMDTAVAKHLSHAYGIMAEQVAIIAQNEGLGKRLAH 474 (563)
Q Consensus 396 ~~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~yg~~~~~vc~~~~~~~~~~~~~~ 474 (563)
..+|+|...||+|+.. +...+...+.+... .. ....++.+.++||.++||+++..|+.++...+...+ ++
T Consensus 395 ~~~~~t~~~~l~g~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~l~~~yG~~~~~~~~~~~~~~~~~~-~~ 465 (561)
T 3da1_A 395 NEPCTTAAIRLSGGLAEGAQGFPRFLDEASR-KG-------AKLGFDADEVRRLAKLYGSNVDHVLNYAYEGKEEAE-HY 465 (561)
T ss_dssp CCCCCTTSCCCTTCCTTCSTTHHHHHHHHHH-HH-------HTTTCCHHHHHHHHHHHGGGHHHHHHHHHHTHHHHH-HT
T ss_pred CCCCCcCCcccCCccccccccHHHHHHHHHH-Hh-------hccCCCHHHHHHHHHHhcchHHHHHhhccccccccc-CC
Confidence 4789999999999872 22222222221111 00 112389999999999999999999998765421122 56
Q ss_pred CCCc-cHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhc
Q 008503 475 GYPF-LEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWDKSRRKQELQKAKEFLETFK 550 (563)
Q Consensus 475 c~~v-~~~ei~~ai~~e~~~~~~D~l~rRtr~g~g~~~~g~~~~~~v~~~la~~l~~~~~~~~~e~~~~~~~~~~~~ 550 (563)
..++ +++||+|++++||++++.|+|.||||++|.+...+..+.++|+++|+++||||.+++++|++++..++..+-
T Consensus 466 ~~~~~~~ae~~~~~~~e~a~~~~D~l~rRt~~~~~~~~~~~~~~~~~~~~~~~~l~w~~~~~~~~~~~~~~~~~~~~ 542 (561)
T 3da1_A 466 GLPALLLGQLQYGVEQEMVATPLDFFVRRTGALFFNISLVHQWKEAVLRWMAEEFSWTEEEKTRFQNELETELKMAV 542 (561)
T ss_dssp TSCHHHHHHHHHHHHHSCCCSHHHHHHTTSCHHHHCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHhhccCCHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 7777 999999999999999999999999999998888899999999999999999999999999999999998764
No 2
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=100.00 E-value=4.8e-60 Score=517.32 Aligned_cols=482 Identities=28% Similarity=0.449 Sum_probs=368.9
Q ss_pred CCchHHHHHHHHhhcCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHh----
Q 008503 53 VPSRVVQESALIAANNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAV---- 128 (563)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~---- 128 (563)
.+.|...+..+. ..++||+|||||++|+++|++|+++|++|+|||++++++|+|++|++++|+|.+|+.+..
T Consensus 18 ~~~r~~~~~~m~----~~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~GtS~~s~gli~~g~ryl~~~~~~l~ 93 (571)
T 2rgh_A 18 NKTRQDSIQKMQ----QEELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVV 93 (571)
T ss_dssp HHHHHHHHHHHH----HSCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCSEECCCGGGGGGTCHHHH
T ss_pred ccCHHHHHHhcc----cCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccccccccccchhhccChHHH
Confidence 345666666665 467999999999999999999999999999999999999999999999999998753210
Q ss_pred ----------hcc--------C-----cc--------cH--H---HHHHHHHHh---hhc----------------ccCC
Q 008503 129 ----------FNL--------D-----YG--------QL--K---LVFHALEER---KQA----------------KDRS 153 (563)
Q Consensus 129 ----------~~~--------~-----~~--------~~--~---~~~~~l~~~---~~~----------------~~~~ 153 (563)
..+ . +. .. . ...+.+... ... ..+.
T Consensus 94 ~~~~~e~~~l~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~e~~~~~P~l~~~~ 173 (571)
T 2rgh_A 94 ADTVGERAVVQGIAPHIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEG 173 (571)
T ss_dssp HHHHHHHHHHHHHCTTSSEECCEEEEEESSSSSCSCCHHHHHHHHHHHHHHHTCSSSTTCCEEECHHHHHHHCTTSCCTT
T ss_pred HHHHHHHHHHHHhCcccccccCceEEeecccccccccHHHHHHHHHHHHHHhhhhccCCCcEEECHHHHHHhCcCCchhh
Confidence 000 0 00 00 0 111222111 000 1123
Q ss_pred cceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChh
Q 008503 154 LKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 154 ~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~ 233 (563)
+.+++.+.+++++|.+++..+++.+.++|++|+++++|+++..++ ++|++|.+.|..+++..+++||.||||+|+|++
T Consensus 174 ~~gg~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 174 LKGAGVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp EEEEEEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred ceEEEEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 556677778999999999999999999999999999999999875 689999988755676568999999999999999
Q ss_pred hhhhhhcCCCC-CeeecCCceEEEecCCcCCCCccccccc-CCCCcEEEEeecCCcEEeeecCCCC-CCCCCCCCCHHHH
Q 008503 234 SVRKLADQNVQ-PMICPSSGVHIVLPDYYSPEGMGLIVPK-TKDGRVVFMLPWLGRTVAGTTDSDT-VITLLPEPHEDEI 310 (563)
Q Consensus 234 ~l~~~~g~~~~-~~v~~~~G~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~P~~g~~~iG~t~~~~-~~~~~~~~~~~~~ 310 (563)
.+.++.+...+ ..+.|.+|++++++....+....++++. ..+++.+|++|+++.+++|+|++.. .++.+..++.+++
T Consensus 252 ~l~~~~g~~~~~~~i~p~rG~~l~~~~~~~~~~~~~~~~~~~~dgr~~~~~P~~~~~~iG~t~~~~~~~~~~~~~~~~~~ 331 (571)
T 2rgh_A 252 KVRNLNFTRPVSPKMRPTKGIHLVVDAKKLPVPQPTYFDTGKQDGRMVFAIPRENKTYFGTTDTDYQGDFTDPKVTQEDV 331 (571)
T ss_dssp HHHTTCCSSCCCCCBCCEEEEEEEEEGGGSCCSSCEEEECSSSSSCEEEEEEETTEEEECCCCEECCSCSSSCCCCHHHH
T ss_pred HHHHhhccCccCceeeccceEEEEeccccCCCCcEEEEeccCCCCcEEEEEEcCCeEEEcCCCcCCCCCcCCCCCCHHHH
Confidence 99888775432 3489999999999764333333444432 2578899999999999999998642 2445678899999
Q ss_pred HHHHHHHhhhcc-CCCCCCCcccceeeeeecccCCCCCCCCCccccceEeecCCCeEEEecChhhhhHHHHHHHHHHHHH
Q 008503 311 QFILDAISDYLN-VKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTITGGKWTTYRSMAEDAVNAAIK 389 (563)
Q Consensus 311 ~~ll~~~~~~~~-~~l~~~~v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~~~gl~~~~Gg~~t~a~~~Ae~v~~~i~~ 389 (563)
+++++.+.++|| ..+...+|+..|+|+||+++|+. .++..++|+|+|..+.+|+++++||+||++|.||+.+++++.+
T Consensus 332 ~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp~~~d~~-~~~~~~~r~~~i~~~~~gl~~v~GGk~Tt~r~~Ae~~~~~i~~ 410 (571)
T 2rgh_A 332 DYLLDVINHRYPEANITLADIEASWAGLRPLLIGNS-GSPSTISRGSSLEREPDGLLTLSGGKITDYRKMAEGALRLIRQ 410 (571)
T ss_dssp HHHHHHHHHHSTTTCCCGGGCCEEEEEEECCBCC------------EEEEECTTSCEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCccCCchhceeEEeEEeeeccCCCC-CCcccCCCCcEEecCCCCeEEEeCcchhhHHHHHHHHHHHHHH
Confidence 999999999993 13577889999999999998753 3456778999998777899999999999999999999999998
Q ss_pred cC----CCCCCCCCccccccccCCCCCCcchHHHHHHHHhhhhhccCCCccCCCCCHHHHHHHHHHhCCcHHHHHHHHhc
Q 008503 390 SG----KLNPSNGCLTQNLRLVGGDGWDPSSFTVLAQQYVRMKRTYGGKFVPGVMDTAVAKHLSHAYGIMAEQVAIIAQN 465 (563)
Q Consensus 390 ~~----~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~yg~~~~~vc~~~~~ 465 (563)
.+ +. +..+|.|...||+|+......+..+...... .. ....++.+.+++|..+||+++..|+.++.+
T Consensus 411 ~l~~~~~~-~~~~~~t~~~~l~g~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~l~~~yG~~~~~~~~~~~~ 481 (571)
T 2rgh_A 411 LLKEEYGI-ETKEIDSKKYQISGGNFDPTKLEETVTELAK-EG-------VAAGLEEEDATYIADFYGTNARRIFELAKE 481 (571)
T ss_dssp HHHHHHCC-CCCCCCTTTCCCTTCCSCTTCHHHHHHHHHH-HH-------HHTTCCHHHHHHHHHHHGGGHHHHHHHHHT
T ss_pred HhhhccCC-CCCCCCcCCCCCCCCCCCcchHHHHHHHHHH-hc-------cccCCCHHHHHHHHhcccchHHHHHhcccc
Confidence 86 33 3478999999999986333222221111100 00 011289999999999999999999987765
Q ss_pred cCCCCccccCCCc---cHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 008503 466 EGLGKRLAHGYPF---LEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWDKSRRKQELQKA 542 (563)
Q Consensus 466 ~~~~~~~~~c~~v---~~~ei~~ai~~e~~~~~~D~l~rRtr~g~g~~~~g~~~~~~v~~~la~~l~~~~~~~~~e~~~~ 542 (563)
.. .|+.+ +++||+|++++||++++.|+|.||||++|.+.+.+..|.++|+++|+++|||+.+++++|++.+
T Consensus 482 ~~------~~~~~~~~~~aev~~~~~~e~a~~~~D~l~RRt~~~~~~~~~~~~~~~~~~~~~~~~l~w~~~~~~~~~~~~ 555 (571)
T 2rgh_A 482 MA------PYPGLSLAESARLRYGLEEEMVLAPGDYLIRRTNHLLFERDQLDEIKQPVIDAIAEYFGWTEEEKAQQTKRL 555 (571)
T ss_dssp CC------CCTTSCHHHHHHHHHHHHHSCCCSHHHHHHTTSSHHHHCGGGHHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cc------cccCCCcccHHHHHHHHhhccCCCHHHHHHHhhhccccCccchHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 31 13323 5799999999999999999999999999977889999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcc
Q 008503 543 KEFLETFKSSKNKQ 556 (563)
Q Consensus 543 ~~~~~~~~~~~~~~ 556 (563)
+.++..+.....|.
T Consensus 556 ~~~~~~~~~~~~~~ 569 (571)
T 2rgh_A 556 EALIAESDLRELKG 569 (571)
T ss_dssp HHHHHHHTTTTTTT
T ss_pred HHHHHHccchhhhc
Confidence 99998877666665
No 3
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=100.00 E-value=6.1e-56 Score=478.97 Aligned_cols=434 Identities=28% Similarity=0.411 Sum_probs=340.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhc------------------c-
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFN------------------L- 131 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~------------------~- 131 (563)
++||+|||||++|+++|++|+++|++|+|||++++++|+|++|++++|+|.+|+...... +
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 82 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIA 82 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCccc
Confidence 589999999999999999999999999999999999999999999999998876421000 0
Q ss_pred -------Cccc--H-HHHHH---HHHHhh----hc-------------ccCCcceEEEecCceechHHHHHHHHHHHHHC
Q 008503 132 -------DYGQ--L-KLVFH---ALEERK----QA-------------KDRSLKGAVVYYDGQMNDSRLNVGLALTAALA 181 (563)
Q Consensus 132 -------~~~~--~-~~~~~---~l~~~~----~~-------------~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~ 181 (563)
.... . ....+ .+.+.. .+ ....+.+++.+.+++++|.+++..+.+.+.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~~~ 162 (501)
T 2qcu_A 83 FPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRK 162 (501)
T ss_dssp EEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHHHT
T ss_pred cccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHHHc
Confidence 0000 0 00000 011100 00 01124566777889999999999999999999
Q ss_pred CCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhh-hcCCCCCeeecCCceEEEecCC
Q 008503 182 GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKL-ADQNVQPMICPSSGVHIVLPDY 260 (563)
Q Consensus 182 G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~-~g~~~~~~v~~~~G~~~~~~~~ 260 (563)
|++++++++|+++..++ ++++|.+.+..+|+..+++||.||||+|+|++.+.+. .+......+.|.+|++++++..
T Consensus 163 Gv~i~~~~~V~~l~~~~---~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~~i~p~rG~~~~~~~~ 239 (501)
T 2qcu_A 163 GGEVLTRTRATSARREN---GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRV 239 (501)
T ss_dssp TCEEECSEEEEEEEEET---TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSSCBCCEEEEEEEEECS
T ss_pred CCEEEcCcEEEEEEEeC---CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcccccccceeEEEEECCC
Confidence 99999999999998863 5788888764466656899999999999999998873 3332123489999999999854
Q ss_pred cCCCCcccccccCCCCcEEEEeecC-CcEEeeecCCCCC-CCCCCCCCHHHHHHHHHHHhhhccC-CCCCCCcccceeee
Q 008503 261 YSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAGTTDSDTV-ITLLPEPHEDEIQFILDAISDYLNV-KVRRTDVLSAWSGI 337 (563)
Q Consensus 261 ~~~~~~~~~~~~~~~g~~~~~~P~~-g~~~iG~t~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~~-~l~~~~v~~~~aG~ 337 (563)
. +....++++ ..+++.+|++|+. +.+++|+|+.... ++.+..++.++++++++.++++| | .+...+++..|+|+
T Consensus 240 ~-~~~~~~~~~-~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-p~~l~~~~v~~~~aG~ 316 (501)
T 2qcu_A 240 H-TQKQAYILQ-NEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHF-KKQLSRDDIVWTYSGV 316 (501)
T ss_dssp S-SCSCEEEEE-CTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHHHHHHHHHHHHB-SSCCCGGGCCEEEEEE
T ss_pred C-CCceEEEee-cCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHHHHHHHHHHHhc-CCCCCcccEEEEEEEE
Confidence 3 333344444 5678899999996 7888999976532 44567889999999999999999 5 78888999999999
Q ss_pred eecccCCCCCCCCCccccceEe--e--cCCCeEEEecChhhhhHHHHHHHHHHHHHcCCCCCCCCCccccccccCCCCCC
Q 008503 338 RPLAMDPSAKNTESISRDHVVC--E--DFPGLVTITGGKWTTYRSMAEDAVNAAIKSGKLNPSNGCLTQNLRLVGGDGWD 413 (563)
Q Consensus 338 rp~~~d~~~~~~~~~~~~~~i~--~--~~~gl~~~~Gg~~t~a~~~Ae~v~~~i~~~~~~~~~~~~~~~~~~l~g~~~~~ 413 (563)
||+++|+. .....+++++++. . +.+|+++++||+||++|.|||++++.+.+.+ ....+|.|+..||+|+..+.
T Consensus 317 Rp~~~d~~-p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~~~--~~~~~~~t~~~~l~g~~~~~ 393 (501)
T 2qcu_A 317 RPLCDDES-DSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYY--QGIGPAWTKESVLPGGAIEG 393 (501)
T ss_dssp ECCBCCCC-SSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGGGS--TTCCCCCGGGCCCTTCCSSS
T ss_pred eeecCCCC-CccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHHhh--cccCCCCcCCccCcCCCccc
Confidence 99998764 3355667888887 4 2368999999999999999999999999886 35678999999999997554
Q ss_pred c--chHHHHHHHHhhhhhccCCCccCCCCCHHHHHHHHHHhCCcHHHHHHHHhcc-CCCCccccCCCccHHHHHHHHHhc
Q 008503 414 P--SSFTVLAQQYVRMKRTYGGKFVPGVMDTAVAKHLSHAYGIMAEQVAIIAQNE-GLGKRLAHGYPFLEAEVAYCARNE 490 (563)
Q Consensus 414 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~yg~~~~~vc~~~~~~-~~~~~~~~c~~v~~~ei~~ai~~e 490 (563)
. .+...+...+. .++.+.+++|+.+||+++..|+..+.++ ++.+. .|++|+++||+|||++|
T Consensus 394 ~~~~~~~~~~~~~~-------------~~~~~~~~~l~~~yg~~~~~~~~~~~~~~~~~~~--~~~~~~~~ei~~~~~~e 458 (501)
T 2qcu_A 394 DRDDYAARLRRRYP-------------FLTESLARHYARTYGSNSELLLGNAGTVSDLGED--FGHEFYEAELKYLVDHE 458 (501)
T ss_dssp TTTTHHHHHHHHCT-------------TSCHHHHHHHHHHTGGGHHHHHTTCCSGGGGCCB--CSTTCBHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhcc-------------CCCHHHHHHHHhhhchhHHHHHHhcccChhhccc--cCCcccHHHHHHHHHhc
Confidence 3 22223333322 2789999999999999999999876554 55555 49999999999999999
Q ss_pred CCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCC
Q 008503 491 YCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWD 531 (563)
Q Consensus 491 ~~~~~~D~l~rRtr~g~g~~~~g~~~~~~v~~~la~~l~~~ 531 (563)
+++++.|+|+||||+||++ +.+|.++|+++|+++++.+
T Consensus 459 ~~~~~~d~l~rRtr~~~~~---~~~~~~~v~~~~~~~~~~~ 496 (501)
T 2qcu_A 459 WVRRADDALWRRTKQGMWL---NADQQSRVSQWLVEYTQQR 496 (501)
T ss_dssp CCCSHHHHHHTTCCGGGTC---CHHHHHHHHHHHHHHHHSS
T ss_pred CCCCHHHHHHHHHhcchhh---hHHHHHHHHHHHHHHhccc
Confidence 9999999999999999985 7899999999999998755
No 4
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.97 E-value=3.1e-30 Score=266.54 Aligned_cols=306 Identities=20% Similarity=0.221 Sum_probs=217.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC-CCCCCccCCCCccccchhhHH----------------HHhhc--
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRYLE----------------KAVFN-- 130 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~-~~~g~s~~~~~~~~~g~~~~~----------------~~~~~-- 130 (563)
.++||+|||||++|+++|+.|+++|++|+||||++ ++.++|+++.++++.+..+.. +....
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999994 888999999999987654311 10000
Q ss_pred cCc---------------ccHHHHHHHHHHhhh--c----------ccC--Ccc-eEEEecCceechHHHHHHHHHHHHH
Q 008503 131 LDY---------------GQLKLVFHALEERKQ--A----------KDR--SLK-GAVVYYDGQMNDSRLNVGLALTAAL 180 (563)
Q Consensus 131 ~~~---------------~~~~~~~~~l~~~~~--~----------~~~--~~~-~~~~~~~~~~~~~~l~~~l~~~a~~ 180 (563)
+.+ ..+....+...+.+. . ..+ ... +.+.+.++.+++..+...|.+.+++
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (369)
T 3dme_A 83 VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAES 162 (369)
T ss_dssp CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHHH
Confidence 000 001111222222211 0 001 122 3345678889999999999999999
Q ss_pred CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhh-cCCC--CCeeecCCceEEEe
Q 008503 181 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLA-DQNV--QPMICPSSGVHIVL 257 (563)
Q Consensus 181 ~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~-g~~~--~~~v~~~~G~~~~~ 257 (563)
+|++++++++|++|..+++ .++.|.. .+|+..+++||.||+|+|.|+..+.+++ |.+. ...+.|.+|+++.+
T Consensus 163 ~Gv~i~~~~~v~~i~~~~~--~~~~v~~---~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~~i~p~rG~~~~~ 237 (369)
T 3dme_A 163 DGAQLVFHTPLIAGRVRPE--GGFELDF---GGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIPPEYLCKGSYFTL 237 (369)
T ss_dssp TTCEEECSCCEEEEEECTT--SSEEEEE---CTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSCCCEEEEEEEEEC
T ss_pred CCCEEECCCEEEEEEEcCC--ceEEEEE---CCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccceeeecceEEEEE
Confidence 9999999999999998763 3234543 3454468999999999999999998888 7641 12389999999998
Q ss_pred cCCcCCCCcccccccCCCCc-EEEEeecCCcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcccceee
Q 008503 258 PDYYSPEGMGLIVPKTKDGR-VVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSG 336 (563)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~g~-~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~~~~aG 336 (563)
+.. .+....++..+..++. +.+..+.+|.+++|++.+.. ...+..++.+.++.+++.+.+++ |.+...++++.|+|
T Consensus 238 ~~~-~~~~~~~~~~p~~~~~~~~~~~~~~g~~~iG~t~e~~-~~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~v~~~w~G 314 (369)
T 3dme_A 238 AGR-APFSRLIYPVPQHAGLGVHLTLDLGGQAKFGPDTEWI-ATEDYTLDPRRADVFYAAVRSYW-PALPDGALAPGYTG 314 (369)
T ss_dssp SSS-CSCSSEEEECTTCSSCCCCEEECTTSCEEECCCCEEE-SSCCCCCCGGGGGGHHHHHHTTC-TTCCTTCCEEEEEE
T ss_pred CCC-CccCceeecCCCCCCceEEEeCccCCcEEECCCcccc-cccccccCHHHHHHHHHHHHHHC-CCCChhhceeccee
Confidence 764 2222222221122332 33444567889999886431 23456778888999999999999 78888889999999
Q ss_pred eeecccCCCCCCCCCccccceE-ee---cCCCeEEEecC---hhhhhHHHHHHHHHHHH
Q 008503 337 IRPLAMDPSAKNTESISRDHVV-CE---DFPGLVTITGG---KWTTYRSMAEDAVNAAI 388 (563)
Q Consensus 337 ~rp~~~d~~~~~~~~~~~~~~i-~~---~~~gl~~~~Gg---~~t~a~~~Ae~v~~~i~ 388 (563)
+||.+++++ ...++|+| +. ..+|+++++|+ ++|.+|.+|+.++++|.
T Consensus 315 ~Rp~~~~~~-----~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap~~a~~~a~~i~ 368 (369)
T 3dme_A 315 IRPKISGPH-----EPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA 368 (369)
T ss_dssp EEEESSCTT-----SCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCC-----CCcCCeEEecccccCCCCEEEEeCCCCchHhccHHHHHHHHHHhh
Confidence 999975321 11255777 33 35799999995 79999999999999873
No 5
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.96 E-value=5.9e-28 Score=251.23 Aligned_cols=298 Identities=17% Similarity=0.192 Sum_probs=213.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhh-------------HHHHhhcc--Cc-
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRY-------------LEKAVFNL--DY- 133 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~-------------~~~~~~~~--~~- 133 (563)
.++||+|||||++|+++|++|+++|++|+|||+++++.++|+++.++++..... +.+..... .+
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 468999999999999999999999999999999988889999999888753321 11110000 00
Q ss_pred -----------ccHHHH---HHHHHHhhhc---------------cc-CCcceE-EEecCceechHHHHHHHHHHHHHCC
Q 008503 134 -----------GQLKLV---FHALEERKQA---------------KD-RSLKGA-VVYYDGQMNDSRLNVGLALTAALAG 182 (563)
Q Consensus 134 -----------~~~~~~---~~~l~~~~~~---------------~~-~~~~~~-~~~~~~~~~~~~l~~~l~~~a~~~G 182 (563)
.....+ .+.+.+.+.. .. ..+.++ +.+.++.++|..+...|.+.+++.|
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~G 163 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEYG 163 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHHHTT
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHHHCC
Confidence 001111 1111111110 01 223333 4677889999999999999999999
Q ss_pred CEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCC--CCCeeecCCceEEEecCC
Q 008503 183 AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN--VQPMICPSSGVHIVLPDY 260 (563)
Q Consensus 183 ~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~--~~~~v~~~~G~~~~~~~~ 260 (563)
++++++++|+++..++ +++.+|.. .+ .+++||.||+|+|.|+..+.+..+.. .| +.|.+|+++.++..
T Consensus 164 v~i~~~~~v~~i~~~~--~~v~gv~~---~~---g~i~a~~VV~A~G~~s~~l~~~~g~~~~~~--~~~~~g~~~~~~~~ 233 (382)
T 1y56_B 164 AKLLEYTEVKGFLIEN--NEIKGVKT---NK---GIIKTGIVVNATNAWANLINAMAGIKTKIP--IEPYKHQAVITQPI 233 (382)
T ss_dssp CEEECSCCEEEEEESS--SBEEEEEE---TT---EEEECSEEEECCGGGHHHHHHHHTCCSCCC--CEEEEEEEEEECCC
T ss_pred CEEECCceEEEEEEEC--CEEEEEEE---CC---cEEECCEEEECcchhHHHHHHHcCCCcCcC--CCeeEeEEEEEccC
Confidence 9999999999998875 57776753 22 27999999999999998888887765 44 78999998887543
Q ss_pred cCCCCcccccccCCCCcEEEEeecCCcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcccceeeeeec
Q 008503 261 YSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPL 340 (563)
Q Consensus 261 ~~~~~~~~~~~~~~~g~~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~~~~aG~rp~ 340 (563)
......+.++. .+...+|+.|..+.+++|..........+..++.+.++.+++.+.+++ |.+...++.+.|+|+||.
T Consensus 234 ~~~~~~~~~~~--~~~~~~y~~p~~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-p~l~~~~~~~~~~g~r~~ 310 (382)
T 1y56_B 234 KRGTINPMVIS--FKYGHAYLTQTFHGGIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKII-PALKNLLILRTWAGYYAK 310 (382)
T ss_dssp STTSSCSEEEE--STTTTEEEECCSSSCCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHC-GGGGGSEEEEEEEEEEEE
T ss_pred CcccCCCeEEe--cCCCeEEEEEeCCeEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhC-CCcCCCCceEEEEecccc
Confidence 21111133332 221357888975447888522111122345677889999999999999 678777899999999999
Q ss_pred ccCCCCCCCCCccccceEeec--CCCeEEEecC---hhhhhHHHHHHHHHHHHHc
Q 008503 341 AMDPSAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 341 ~~d~~~~~~~~~~~~~~i~~~--~~gl~~~~Gg---~~t~a~~~Ae~v~~~i~~~ 390 (563)
++|+. |+|+.. .+|++.++|. +++.++.+|+.+++++...
T Consensus 311 t~d~~----------p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~~ 355 (382)
T 1y56_B 311 TPDSN----------PAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITKG 355 (382)
T ss_dssp CTTSC----------CEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCC----------cEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhCC
Confidence 98854 888764 3799999883 6999999999999999875
No 6
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.96 E-value=3.1e-28 Score=252.87 Aligned_cols=296 Identities=18% Similarity=0.179 Sum_probs=212.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC-CCCCCccCCCCccccchhh------HH---HHhhccC------
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRY------LE---KAVFNLD------ 132 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~-~~~g~s~~~~~~~~~g~~~------~~---~~~~~~~------ 132 (563)
+.++||+|||||++|+++|++|+ +|++|+|||+++ ++.++|+++.|+++..+.. .. +.+.++.
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEH 85 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCCc
Confidence 45689999999999999999999 699999999994 7789999999988754311 00 0011100
Q ss_pred --c-----------ccHH---HHHHHHHHhhhc----------------ccCCcce-EEEecCceechHHHHHHHHHHHH
Q 008503 133 --Y-----------GQLK---LVFHALEERKQA----------------KDRSLKG-AVVYYDGQMNDSRLNVGLALTAA 179 (563)
Q Consensus 133 --~-----------~~~~---~~~~~l~~~~~~----------------~~~~~~~-~~~~~~~~~~~~~l~~~l~~~a~ 179 (563)
+ .... ...+.+.+.+.. ..+...+ .+.+.++.++|..++..|.+.++
T Consensus 86 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 165 (381)
T 3nyc_A 86 PLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIR 165 (381)
T ss_dssp CSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred ccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHH
Confidence 0 1111 112222221110 1111323 34666788999999999999999
Q ss_pred HCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEecC
Q 008503 180 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPD 259 (563)
Q Consensus 180 ~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~~ 259 (563)
++|++|+++++|++|..++ +. ++|. +.. .+++|+.||+|+|.|+..+.+..+... ..+.|.+|+++.++.
T Consensus 166 ~~Gv~i~~~~~V~~i~~~~--~~-~~V~-----t~~-g~i~a~~VV~A~G~~s~~l~~~~g~~~-~~~~p~rg~~~~~~~ 235 (381)
T 3nyc_A 166 RNQGQVLCNHEALEIRRVD--GA-WEVR-----CDA-GSYRAAVLVNAAGAWCDAIAGLAGVRP-LGLQPKRRSAFIFAP 235 (381)
T ss_dssp HTTCEEESSCCCCEEEEET--TE-EEEE-----CSS-EEEEESEEEECCGGGHHHHHHHHTCCC-CCCEEEEEEEEEECC
T ss_pred HCCCEEEcCCEEEEEEEeC--Ce-EEEE-----eCC-CEEEcCEEEECCChhHHHHHHHhCCCC-CceeeeEEEEEEECC
Confidence 9999999999999999875 33 4453 223 379999999999999999998888651 238999999998875
Q ss_pred CcCC--CCcccccccCCCCcEEEEeecCCcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcccceeee
Q 008503 260 YYSP--EGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGI 337 (563)
Q Consensus 260 ~~~~--~~~~~~~~~~~~g~~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~~~~aG~ 337 (563)
+... ...+.+.. .+ ..+|+.|..|.+++|.+......+.+..++...++.+++.+..+ +.+...++.+.|+|+
T Consensus 236 ~~~~~~~~~p~~~~--~~-~~~y~~p~~g~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~w~G~ 310 (381)
T 3nyc_A 236 PPGIDCHDWPMLVS--LD-ESFYLKPDAGMLLGSPANADPVEAHDVQPEQLDIATGMYLIEEA--TTLTIRRPEHTWAGL 310 (381)
T ss_dssp CTTCCCTTCCEEEE--TT-SSCEEEEETTEEEEECCCCEECCSSCCCCCHHHHHHHHHHHHHH--BSCCCCCCSEEEEEE
T ss_pred CcCCCcCccceEEe--CC-CCEEEEeCCCcEEEeCCcCCCCCcccCCCChHHHHHHHHHHHhc--CCCcccceeeeeEEc
Confidence 4311 11123221 12 23688898888889988754223445567777888888888774 467777899999999
Q ss_pred eecccCCCCCCCCCccccceEeec--CCCeEEEecC---hhhhhHHHHHHHHHHHHHc
Q 008503 338 RPLAMDPSAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 338 rp~~~d~~~~~~~~~~~~~~i~~~--~~gl~~~~Gg---~~t~a~~~Ae~v~~~i~~~ 390 (563)
||.++|+. |+|+.. .+|++.++|. +++.++.+|+.++++|...
T Consensus 311 r~~t~D~~----------p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~g~ 358 (381)
T 3nyc_A 311 RSFVADGD----------LVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQ 358 (381)
T ss_dssp EEECTTSC----------CEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHTTC
T ss_pred cccCCCCC----------ceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHhCC
Confidence 99998854 888874 4799999983 6999999999999988643
No 7
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.95 E-value=2e-27 Score=252.85 Aligned_cols=298 Identities=19% Similarity=0.160 Sum_probs=212.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC-CcEEEEec-cCCCCCCccCCCCccccchhh-------------HHHHhhc---
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVER-EDFSSGTSSRSTKLIHGGVRY-------------LEKAVFN--- 130 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G-~~V~llEk-~~~~~g~s~~~~~~~~~g~~~-------------~~~~~~~--- 130 (563)
+.++||+|||||++|+++|++|+++| ++|+|||+ ..++.|+|+++.|+++..... +.+....
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g~S~~~~g~i~~~~~~~~~~~l~~~~~~~~~~l~~~g~~ 100 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSSTMNRLVAGSTVRLFEDAQRGGED 100 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCSGGGSSCCEEECCCSSHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCCcccCCCcEecccCCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 35689999999999999999999999 99999999 778889999999988764321 1111110
Q ss_pred cCcc--------c---HHHHHHHHH---Hhh--------h-c-------------------ccCCcceE-EEecCceech
Q 008503 131 LDYG--------Q---LKLVFHALE---ERK--------Q-A-------------------KDRSLKGA-VVYYDGQMND 167 (563)
Q Consensus 131 ~~~~--------~---~~~~~~~l~---~~~--------~-~-------------------~~~~~~~~-~~~~~~~~~~ 167 (563)
..+. . ...+.+... +.+ . + ..+.+.++ +.+.++.+++
T Consensus 101 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~p~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (448)
T 3axb_A 101 LGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEVLGVGDVEGAVLIRSAGFLDA 180 (448)
T ss_dssp CCCBCCCEEEEECHHHHHHHHHHHTTSCCBTTTEEEECHHHHHHHHCCCCCCTTSSHHHHHTCCCCCEEEEESSEEECCH
T ss_pred cccccCCEEEEcCHHHHHHHHHHHHHHHhhCCCccccchhhhhhcccccccCCCHHHHHhccCCCceEEEEeCCCeEEcH
Confidence 1010 0 111100000 000 0 0 01122333 3456788999
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEc--------------CCCCcEEEEEEEECCCCcEEEE--EeCeEEEccCcC
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKD--------------EASNRIIGARIRNNLSGKEFDT--YAKVVVNAAGPF 231 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~--------------~~~g~v~gv~~~d~~~g~~~~i--~A~~VI~AtG~~ 231 (563)
.+++..|.+.+++.|++++++++|++|..+ ++ +++++|.. .+| ++ .||.||+|+|.|
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t---~~g---~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVL---SDG---TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEE---TTS---CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-CceEEEEe---CCC---EEeecCCEEEECCCcC
Confidence 999999999999999999999999999872 22 56777754 333 57 999999999999
Q ss_pred hhhhhhhhcCCCCCeeecCCceEEEecCCcCCCC-------------cccccccCCCCcEEEEeecC--CcEEeeecCCC
Q 008503 232 CDSVRKLADQNVQPMICPSSGVHIVLPDYYSPEG-------------MGLIVPKTKDGRVVFMLPWL--GRTVAGTTDSD 296 (563)
Q Consensus 232 s~~l~~~~g~~~~~~v~~~~G~~~~~~~~~~~~~-------------~~~~~~~~~~g~~~~~~P~~--g~~~iG~t~~~ 296 (563)
+..+.+.++...+ +.|.+|+++.++....... .++++. ...+|+.|+. |.+++|.+...
T Consensus 254 s~~l~~~~g~~~~--~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~y~~p~~~~g~~~iG~~~~~ 327 (448)
T 3axb_A 254 SNRLLNPLGIDTF--SRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIIL----PKRVLVRPAPREGSFWVQLSDNL 327 (448)
T ss_dssp HHHHHGGGTCCCS--EEEEEEEEEEEECCSHHHHHHHHHCCTTSSSSCCEEEE----TTTEEEEEETTTTEEEEEECCCT
T ss_pred HHHHHHHcCCCCc--ccccceEEEEeCCcccccccccccccccccCCCceEEc----CCceEEeecCCCCeEEEecCCcc
Confidence 9989888876643 8999999998864321000 112221 1447888974 57889998763
Q ss_pred C-CCCCCC--CCCHHH-HHHHHHHHhhhccCCCCCCCcccceeeeeec-ccCCCCCCCCCccccceEeecCCCeEEEecC
Q 008503 297 T-VITLLP--EPHEDE-IQFILDAISDYLNVKVRRTDVLSAWSGIRPL-AMDPSAKNTESISRDHVVCEDFPGLVTITGG 371 (563)
Q Consensus 297 ~-~~~~~~--~~~~~~-~~~ll~~~~~~~~~~l~~~~v~~~~aG~rp~-~~d~~~~~~~~~~~~~~i~~~~~gl~~~~Gg 371 (563)
. +...+. .++.+. .+.+++.+.+++ |.+...++...|+|+||. ++|+. |+|+..++|++.++|.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~~~~~w~G~r~~~t~d~~----------p~ig~~~~~l~~a~G~ 396 (448)
T 3axb_A 328 GRPFALEEDPQPEEHYYSLAILPILSLYL-PQFQDAYPSGGWAGHYDISFDANP----------VVFEPWESGIVVAAGT 396 (448)
T ss_dssp TSCBCCCSSCCCCHHHHHHHTHHHHHHHC-GGGTTCCCSEEEEEEEEEETTSSC----------EEECGGGCSEEEEECC
T ss_pred cCCcccccccCCChHHHHHHHHHHHHHhC-cCcccCCcccceEEEeccccCCCC----------cEeeecCCCEEEEECC
Confidence 1 122233 567888 899999999999 678778899999999999 98854 7887644899999984
Q ss_pred ---hhhhhHHHHHHHHHHHHHc
Q 008503 372 ---KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 372 ---~~t~a~~~Ae~v~~~i~~~ 390 (563)
+++.++.+|+.+++++...
T Consensus 397 ~g~G~~~ap~~g~~la~~i~~~ 418 (448)
T 3axb_A 397 SGSGIMKSDSIGRVAAAVALGM 418 (448)
T ss_dssp TTCCGGGHHHHHHHHHHHHTTC
T ss_pred CchhHhHhHHHHHHHHHHHcCC
Confidence 7999999999999998753
No 8
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.95 E-value=6.2e-26 Score=237.68 Aligned_cols=296 Identities=19% Similarity=0.244 Sum_probs=212.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHH-CC-CcEEEEeccCCCCCCccCCCCccccchhh-------------HHHHhhccC-
Q 008503 69 SNPLDILVIGGGATGCGVALDAAT-RG-LRVGLVEREDFSSGTSSRSTKLIHGGVRY-------------LEKAVFNLD- 132 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~-~G-~~V~llEk~~~~~g~s~~~~~~~~~g~~~-------------~~~~~~~~~- 132 (563)
+.++||+|||||++|+++|++|++ +| ++|+|||++++++|+|+++.++++..... +.....+..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 98 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMARNTTIIRSNYLWDESAGIYEKSLKLWEQLPEDLEY 98 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGGTSCCCBCCCCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCcccccCceeeecCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456899999999999999999999 99 99999999998889999999988764421 111111000
Q ss_pred ---c------------ccHHHH---HHHHHHhhhc---------------c-c-----CCcceE-EEecCceechHHHHH
Q 008503 133 ---Y------------GQLKLV---FHALEERKQA---------------K-D-----RSLKGA-VVYYDGQMNDSRLNV 172 (563)
Q Consensus 133 ---~------------~~~~~~---~~~l~~~~~~---------------~-~-----~~~~~~-~~~~~~~~~~~~l~~ 172 (563)
+ .....+ .+.+.+.+.. . . ....++ +.+.++.++|..+..
T Consensus 99 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (405)
T 2gag_B 99 DFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDDIRYPVMGATWQPRAGIAKHDHVAW 178 (405)
T ss_dssp CCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTTSSSCCCEEEEETTCBBCCHHHHHH
T ss_pred CcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCcccccccccceeEEEeCCCccCCHHHHHH
Confidence 0 001111 1111111110 0 1 122333 456788999999999
Q ss_pred HHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCc
Q 008503 173 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSG 252 (563)
Q Consensus 173 ~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G 252 (563)
.|.+.+++.|++++++++|+++..++ +++++|.+ .++ ++.||.||+|+|.|+..+.+..+...| +.+.++
T Consensus 179 ~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~---~~g---~~~a~~vV~a~G~~s~~l~~~~g~~~~--~~~~~~ 248 (405)
T 2gag_B 179 AFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKT---TRG---TIHAGKVALAGAGHSSVLAEMAGFELP--IQSHPL 248 (405)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEE---TTC---CEEEEEEEECCGGGHHHHHHHHTCCCC--EEEEEE
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEe---CCc---eEECCEEEECCchhHHHHHHHcCCCCC--ccccce
Confidence 99999999999999999999998875 57777754 233 689999999999999888888887644 788888
Q ss_pred eEEEecCCcCCCCcccccccCCCCcEEEEeec-CCcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcc
Q 008503 253 VHIVLPDYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVRRTDVL 331 (563)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~-~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~ 331 (563)
++++++.. .+....++.. . +..+|+.|. ++.+++|.+.... ...+...+.+.++.+++.+.+++ |.+...++.
T Consensus 249 ~~~~~~~~-~~~~~~~~~~--~-~~~~y~~p~~~g~~~ig~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~-p~l~~~~~~ 322 (405)
T 2gag_B 249 QALVSELF-EPVHPTVVMS--N-HIHVYVSQAHKGELVMGAGIDSY-NGYGQRGAFHVIQEQMAAAVELF-PIFARAHVL 322 (405)
T ss_dssp EEEEEEEB-CSCCCSEEEE--T-TTTEEEEECTTSEEEEEEEECSS-CCCSSCCCTHHHHHHHHHHHHHC-GGGGGCEEC
T ss_pred eEEEecCC-ccccCceEEe--C-CCcEEEEEcCCCcEEEEeccCCC-CccccCCCHHHHHHHHHHHHHhC-CccccCCcc
Confidence 87776421 1111122221 1 234678885 5678898876431 12234456778899999999998 677777888
Q ss_pred cceeeeeecccCCCCCCCCCccccceEeec-CCCeEEEecC---hhhhhHHHHHHHHHHHHHc
Q 008503 332 SAWSGIRPLAMDPSAKNTESISRDHVVCED-FPGLVTITGG---KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 332 ~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~-~~gl~~~~Gg---~~t~a~~~Ae~v~~~i~~~ 390 (563)
..|+|+||.++|.. |+|+.. .+|++.++|. +++.++.+|+.+++++...
T Consensus 323 ~~w~g~~~~t~d~~----------p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 323 RTWGGIVDTTMDAS----------PIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAND 375 (405)
T ss_dssp EEEEEEEEEETTSC----------CEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHHT
T ss_pred eEEeeccccCCCCC----------CEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhCC
Confidence 99999999998854 888765 4799999984 6999999999999999865
No 9
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.95 E-value=7.2e-26 Score=235.90 Aligned_cols=296 Identities=14% Similarity=0.154 Sum_probs=206.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCC--CCccCCCCccccch----hhH----------HHHhhccC--
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS--GTSSRSTKLIHGGV----RYL----------EKAVFNLD-- 132 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~--g~s~~~~~~~~~g~----~~~----------~~~~~~~~-- 132 (563)
++||+|||||++|+++|++|+++|++|+|||+++.++ |+|..+.++++..+ .+. .+......
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999998777 88888777776432 111 11100000
Q ss_pred -----------cc-c---HHHHHHHHHHhhhc----------------ccCCcceE-EEecCceechHHHHHHHHHHHHH
Q 008503 133 -----------YG-Q---LKLVFHALEERKQA----------------KDRSLKGA-VVYYDGQMNDSRLNVGLALTAAL 180 (563)
Q Consensus 133 -----------~~-~---~~~~~~~l~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~l~~~l~~~a~~ 180 (563)
.. . +....+.+...+.. ..+....+ +.+.++.++|.+++..|.+.+++
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA 162 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHH
Confidence 00 1 11112222221110 01122233 35667899999999999999999
Q ss_pred CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEecCC
Q 008503 181 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPDY 260 (563)
Q Consensus 181 ~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~~~ 260 (563)
.|++++++++|+++..+++ .+ .|. . + . .+++|+.||+|+|.|+..+.+..+...| +.|.+|+++.++..
T Consensus 163 ~Gv~i~~~~~v~~i~~~~~--~~-~v~--~--~-~-g~~~a~~vV~A~G~~~~~l~~~~g~~~p--l~~~rg~~~~~~~~ 231 (389)
T 2gf3_A 163 RGAKVLTHTRVEDFDISPD--SV-KIE--T--A-N-GSYTADKLIVSMGAWNSKLLSKLNLDIP--LQPYRQVVGFFESD 231 (389)
T ss_dssp TTCEEECSCCEEEEEECSS--CE-EEE--E--T-T-EEEEEEEEEECCGGGHHHHGGGGTEECC--CEEEEEEEEEECCC
T ss_pred CCCEEEcCcEEEEEEecCC--eE-EEE--e--C-C-CEEEeCEEEEecCccHHHHhhhhccCCc--eEEEEEEEEEEecC
Confidence 9999999999999998753 33 232 2 2 2 3699999999999999988877764433 88999999988653
Q ss_pred cC----CCCcccccccCCCCcEEEEeecC-C-cEEeeecCCC---CCCCCCCCC--CHHHHHHHHHHHhhhccCCCCCCC
Q 008503 261 YS----PEGMGLIVPKTKDGRVVFMLPWL-G-RTVAGTTDSD---TVITLLPEP--HEDEIQFILDAISDYLNVKVRRTD 329 (563)
Q Consensus 261 ~~----~~~~~~~~~~~~~g~~~~~~P~~-g-~~~iG~t~~~---~~~~~~~~~--~~~~~~~ll~~~~~~~~~~l~~~~ 329 (563)
.. ....+.++....+ ..+|++|.. + .+++|.+... .....+..+ +.++++.+++.+.+++ |.+.. .
T Consensus 232 ~~~~~~~~~~p~~~~~~~~-~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-P~l~~-~ 308 (389)
T 2gf3_A 232 ESKYSNDIDFPGFMVEVPN-GIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYM-PGANG-E 308 (389)
T ss_dssp HHHHBGGGTCCEEEEEETT-EEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHHHHC-GGGCS-C
T ss_pred cccccccccCCEEEEeCCC-CcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHHHhC-CCCCC-C
Confidence 20 0011222221122 267888975 4 7889876531 112234456 7888999999999999 66665 7
Q ss_pred cccceeeeeecccCCCCCCCCCccccceEeec--CCCeEEEec--C-hhhhhHHHHHHHHHHHHHc
Q 008503 330 VLSAWSGIRPLAMDPSAKNTESISRDHVVCED--FPGLVTITG--G-KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 330 v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~--~~gl~~~~G--g-~~t~a~~~Ae~v~~~i~~~ 390 (563)
+...|+|+||.++|+. |+|+.. .+|++.++| | +++.++.+|+.+++++...
T Consensus 309 ~~~~w~g~r~~t~D~~----------p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~~~ 364 (389)
T 2gf3_A 309 LKRGAVCMYTKTLDEH----------FIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTG 364 (389)
T ss_dssp EEEEEEEEEEECTTSC----------CEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHHHHHS
T ss_pred ceEEEEEEeccCCCCC----------eEEccCCCCCCEEEEECCccccccccHHHHHHHHHHHcCC
Confidence 8899999999998854 888864 368999998 3 6999999999999999875
No 10
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.95 E-value=1.6e-25 Score=234.12 Aligned_cols=297 Identities=16% Similarity=0.125 Sum_probs=204.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCC--CCccCCCCccccch-------------hhHHHHhh----cc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSS--GTSSRSTKLIHGGV-------------RYLEKAVF----NL 131 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~--g~s~~~~~~~~~g~-------------~~~~~~~~----~~ 131 (563)
++||+|||||++|+++|++|+++|++|+||||.+... |+|+.+++++...+ ..+.+... .+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERRL 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCccH
Confidence 5899999999999999999999999999999997665 77776766653221 11111000 00
Q ss_pred ------------C----cccHHHHHHHHHHhhhc----------------ccCCc-ceEEEecCceechHHHHHHHHHHH
Q 008503 132 ------------D----YGQLKLVFHALEERKQA----------------KDRSL-KGAVVYYDGQMNDSRLNVGLALTA 178 (563)
Q Consensus 132 ------------~----~~~~~~~~~~l~~~~~~----------------~~~~~-~~~~~~~~~~~~~~~l~~~l~~~a 178 (563)
. ...+....+.+.+.+.. ..+.. .+.+.+..+.++|..+...|.+.+
T Consensus 84 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~a 163 (397)
T 2oln_A 84 IHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTLA 163 (397)
T ss_dssp EECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHHH
T ss_pred HHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHHH
Confidence 0 01122222222222210 01112 233456678899999999999999
Q ss_pred HHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEec
Q 008503 179 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLP 258 (563)
Q Consensus 179 ~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~ 258 (563)
.+.|++++++++|++|..++ +.+ .+.. .+ .+++|+.||+|+|.|+..+.+.++...| +.+.+++++.++
T Consensus 164 ~~~Gv~i~~~~~V~~i~~~~--~~v---~v~t-~~---g~i~a~~VV~A~G~~s~~l~~~~g~~~p--~~~~~~~~~~~~ 232 (397)
T 2oln_A 164 QAAGATLRAGETVTELVPDA--DGV---SVTT-DR---GTYRAGKVVLACGPYTNDLLEPLGARLA--YSVYEMAIAAYR 232 (397)
T ss_dssp HHTTCEEEESCCEEEEEEET--TEE---EEEE-SS---CEEEEEEEEECCGGGHHHHHGGGTCCCC--EEEEEEEEEEEE
T ss_pred HHcCCEEECCCEEEEEEEcC--CeE---EEEE-CC---CEEEcCEEEEcCCcChHHHhhhcCCCCC--eeEEEEEEEEEe
Confidence 99999999999999998875 333 2332 22 2699999999999999888888776544 889999988876
Q ss_pred CCcCCCCcccccccCCCCc----EEEEeecC-C----cEEeeecCC-C---CCCCCCCCCCHHHHHHHHHHHhhhccCCC
Q 008503 259 DYYSPEGMGLIVPKTKDGR----VVFMLPWL-G----RTVAGTTDS-D---TVITLLPEPHEDEIQFILDAISDYLNVKV 325 (563)
Q Consensus 259 ~~~~~~~~~~~~~~~~~g~----~~~~~P~~-g----~~~iG~t~~-~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~l 325 (563)
........+.++....+++ .+|++|.. + .+++|.+.. . .....+..++.+.++.+++.+.++| |.+
T Consensus 233 ~~~~~~~~p~~~~~~~~~~~~~~~~y~~p~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-p~l 311 (397)
T 2oln_A 233 QATPVTEAPFWFAFQQPTPQDTNLFYGFGHNPWAPGEFVRCGPDFEVDPLDHPSAATGVADRRQMDRLSGWLRDHL-PTV 311 (397)
T ss_dssp BCSCCSCCCEEEEECCCCSSSCCCEEECCCCSSSSSSEEEEEECCCCSCCSSGGGCCSSCCHHHHHHHHHHHHHHC-TTB
T ss_pred ecCcccCCCEEEEecCCCCcccceEEECCCCCCCCCceEEEEecCCCCCcCCCccccCCCCHHHHHHHHHHHHHhC-CCC
Confidence 4321111222222122222 57888863 3 578987653 1 1122345677888999999999999 667
Q ss_pred CCCCcccceeeeee--cccCCCCCCCCCccccceEeec------CCCeEEEecC-hhhhhHHHHHHHHHHHHHc
Q 008503 326 RRTDVLSAWSGIRP--LAMDPSAKNTESISRDHVVCED------FPGLVTITGG-KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 326 ~~~~v~~~~aG~rp--~~~d~~~~~~~~~~~~~~i~~~------~~gl~~~~Gg-~~t~a~~~Ae~v~~~i~~~ 390 (563)
.. .+...|+|+++ .++|+. |+|+.. .+|++.++|| +++.++.+|+.+++++...
T Consensus 312 ~~-~~~~~~~g~~~~p~t~D~~----------p~ig~~~~~~~~~~~l~~a~Gg~G~~~ap~~g~~la~~i~~~ 374 (397)
T 2oln_A 312 DP-DPVRTSTCLAVLPTDPERQ----------FFLGTARDLMTHGEKLVVYGAGWAFKFVPLFGRICADLAVED 374 (397)
T ss_dssp CS-SCSEEEEEEEEEESSTTCC----------CEEEESTTTSTTGGGEEEEEESSCGGGHHHHHHHHHHHHHHS
T ss_pred CC-CceeEEEEEecCCcCCCCC----------eEeecCCccccCCCCEEEEeCcchhhccHHHHHHHHHHHhCC
Confidence 65 67889999987 888854 888864 3689998885 6999999999999999865
No 11
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.94 E-value=6.2e-26 Score=235.88 Aligned_cols=292 Identities=17% Similarity=0.210 Sum_probs=208.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHH---------HH---hh-------
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLE---------KA---VF------- 129 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~---------~~---~~------- 129 (563)
+.++||+|||||++|+++|+.|+++|++|+|||++++++|+|+++.|+++.+..+.. .. +.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 94 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELY 94 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 456999999999999999999999999999999999888999999999877653210 00 00
Q ss_pred -----ccCccc--------HHHHHHHHHHh-----------------hhcccCCcceEE-EecCceechHHHHHHHHHHH
Q 008503 130 -----NLDYGQ--------LKLVFHALEER-----------------KQAKDRSLKGAV-VYYDGQMNDSRLNVGLALTA 178 (563)
Q Consensus 130 -----~~~~~~--------~~~~~~~l~~~-----------------~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~a 178 (563)
...+.. ...-.+.+... .........+++ .+.++.++|..+...|.+.+
T Consensus 95 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 174 (382)
T 1ryi_A 95 ALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAA 174 (382)
T ss_dssp HHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHHHH
T ss_pred HhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHHHH
Confidence 000000 00001111100 000112223343 45678899999999999999
Q ss_pred HHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEec
Q 008503 179 ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLP 258 (563)
Q Consensus 179 ~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~ 258 (563)
.+.|++++++++|+++..++ +++ +|.. .+ .+++||.||+|+|.|+..+.+..+...+ +.|.+|+++.++
T Consensus 175 ~~~g~~i~~~~~v~~i~~~~--~~~-~v~~---~~---g~~~a~~vV~A~G~~s~~l~~~~~~~~~--~~~~~g~~~~~~ 243 (382)
T 1ryi_A 175 KMLGAEIFEHTPVLHVERDG--EAL-FIKT---PS---GDVWANHVVVASGVWSGMFFKQLGLNNA--FLPVKGECLSVW 243 (382)
T ss_dssp HHTTCEEETTCCCCEEECSS--SSE-EEEE---TT---EEEEEEEEEECCGGGTHHHHHHTTCCCC--CEEEEEEEEEEE
T ss_pred HHCCCEEEcCCcEEEEEEEC--CEE-EEEc---CC---ceEEcCEEEECCChhHHHHHHhcCCCCc--eeccceEEEEEC
Confidence 99999999999999998765 455 5533 22 2799999999999999888877776533 788999988876
Q ss_pred CCcCCCCcccccccCCCCcEEEEeec-CCcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcccceeee
Q 008503 259 DYYSPEGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGI 337 (563)
Q Consensus 259 ~~~~~~~~~~~~~~~~~g~~~~~~P~-~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~~~~aG~ 337 (563)
...... ..+++. + ..|++|. ++.+++|.+... ...+..++.+..+.+++.+.+++ |.+...++...|+|+
T Consensus 244 ~~~~~~-~~~~~~---~--~~~~~p~~~g~~~vG~~~~~--~~~~~~~~~~~~~~l~~~~~~~~-p~l~~~~~~~~w~g~ 314 (382)
T 1ryi_A 244 NDDIPL-TKTLYH---D--HCYIVPRKSGRLVVGATMKP--GDWSETPDLGGLESVMKKAKTML-PAIQNMKVDRFWAGL 314 (382)
T ss_dssp CCSSCC-CSEEEE---T--TEEEEECTTSEEEEECCCEE--TCCCCSCCHHHHHHHHHHHHHHC-GGGGGSEEEEEEEEE
T ss_pred CCCCCc-cceEEc---C--CEEEEEcCCCeEEEeecccc--cCCCCCCCHHHHHHHHHHHHHhC-CCcCCCceeeEEEEe
Confidence 532211 122221 2 3678887 467889987543 22344577888999999999999 667777788999999
Q ss_pred eecccCCCCCCCCCccccceEeec--CCCeEEEecC---hhhhhHHHHHHHHHHHHHc
Q 008503 338 RPLAMDPSAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 338 rp~~~d~~~~~~~~~~~~~~i~~~--~~gl~~~~Gg---~~t~a~~~Ae~v~~~i~~~ 390 (563)
||.++|+. |+++.. .+|++.++|. +++.++.+|+.+++++...
T Consensus 315 ~~~t~d~~----------p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~~ 362 (382)
T 1ryi_A 315 RPGTKDGK----------PYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNK 362 (382)
T ss_dssp EEECSSSC----------CEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTTC
T ss_pred cccCCCCC----------cEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhCC
Confidence 99998754 788764 3688888872 7999999999999988643
No 12
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.94 E-value=6.3e-26 Score=253.54 Aligned_cols=291 Identities=16% Similarity=0.109 Sum_probs=204.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC-CCCCCccCCCCccccchhh--------H-------HHHhhcc-
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRY--------L-------EKAVFNL- 131 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~-~~~g~s~~~~~~~~~g~~~--------~-------~~~~~~~- 131 (563)
+.++||+|||||++|+++|+.|+++|++|+|||+++ ++.|+|+++.|++++.... . .+.+.++
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~ 341 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLL 341 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 456999999999999999999999999999999974 7788999998888754311 0 0001100
Q ss_pred ----C--c------------ccHHHHHHHHHHhhhc-----------------ccCCcceEEEecCceechHHHHHHHHH
Q 008503 132 ----D--Y------------GQLKLVFHALEERKQA-----------------KDRSLKGAVVYYDGQMNDSRLNVGLAL 176 (563)
Q Consensus 132 ----~--~------------~~~~~~~~~l~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~~~l~~ 176 (563)
. + ..... .+.+.+.+.. ......+.+.+.++.++|..++..|.+
T Consensus 342 ~~~~~~~~~~~g~l~~~~~~~~~~~-~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~ 420 (689)
T 3pvc_A 342 EQGIAFDHQWCGVSQLAFDDKSRGK-IEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMM 420 (689)
T ss_dssp HTTCCCCEECCCEEEECCSHHHHHH-HHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHH
T ss_pred hhccccccccCceEEeccCHHHHHH-HHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHH
Confidence 0 0 00000 0111111100 111222344567889999999999999
Q ss_pred HHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEE
Q 008503 177 TAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIV 256 (563)
Q Consensus 177 ~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~ 256 (563)
.+++.|++|+++++|++|..+++ ++ .|.. .+|. .+++|+.||+|+|.|+..+....+.+ +.|.+|+++.
T Consensus 421 ~a~~~Gv~i~~~t~V~~l~~~~~--~v-~V~t---~~G~-~~i~Ad~VVlAtG~~s~~l~~~~~lp----l~p~rGq~~~ 489 (689)
T 3pvc_A 421 LAQQNGMTCHYQHELQRLKRIDS--QW-QLTF---GQSQ-AAKHHATVILATGHRLPEWEQTHHLP----LSAVRGQVSH 489 (689)
T ss_dssp HHHHTTCEEEESCCEEEEEECSS--SE-EEEE---C-CC-CCEEESEEEECCGGGTTCSTTTTTSC----CEEEEEEEEE
T ss_pred HHHhCCCEEEeCCeEeEEEEeCC--eE-EEEe---CCCc-EEEECCEEEECCCcchhccccccCCc----cccccCcEEE
Confidence 99999999999999999998763 43 4433 2231 15899999999999998887765432 8899999998
Q ss_pred ecCCcCCCCcccccccCCCCcEEEEeecC---CcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCC-----CC
Q 008503 257 LPDYYSPEGMGLIVPKTKDGRVVFMLPWL---GRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVR-----RT 328 (563)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~g~~~~~~P~~---g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~-----~~ 328 (563)
++..........++. .+ .|++|.. |.+++|.+.+. ...+..++.++.+.+++.+.+++ |.+. +.
T Consensus 490 ~~~~~~~~~l~~v~~--~~---~Yl~P~~~~~g~~~iGat~~~--~~~d~~~~~~~~~~ll~~l~~~~-P~l~~~~~~~~ 561 (689)
T 3pvc_A 490 IPTTPVLSQLQQVLC--YD---GYLTPVNPANQHHCIGASYQR--GDIATDFRLTEQQENRERLLRCL-PQVSWPQQVDV 561 (689)
T ss_dssp EECCTTGGGCCSEEE--SS---SEECCCBTTTTEEEEECCCEE--TBCCCCCCHHHHHHHHHHHHHHC-TTCSGGGGCCC
T ss_pred ECCCCccccCCeeEe--CC---ceEccccCCCCeEEEEEeccC--CCCCCCCCHHHHHHHHHHHHHhC-CCccccccccc
Confidence 875422111122221 12 4788975 67889988754 23355678889999999999998 5554 23
Q ss_pred CcccceeeeeecccCCCCCCCCCccccceEeec---------------------------------CCCeEEEec-C--h
Q 008503 329 DVLSAWSGIRPLAMDPSAKNTESISRDHVVCED---------------------------------FPGLVTITG-G--K 372 (563)
Q Consensus 329 ~v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~---------------------------------~~gl~~~~G-g--~ 372 (563)
.+...|+|+||.++|+. |+|+.. .+|++.++| | +
T Consensus 562 ~~~~~w~G~R~~t~D~l----------PiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~l~~a~G~g~~G 631 (689)
T 3pvc_A 562 SDNQARCGVRCAIRDHL----------PMVGAVPDYAATLAQYQDLSRRIQHGGESEVNDIAVAPVWPELFMVGGLGSRG 631 (689)
T ss_dssp TTCCEEEEEEEECTTSC----------CEEEEEECHHHHHHHSTTHHHHC--------CCCCCCCEEEEEEEEECCTTCH
T ss_pred cccceeEEEeeecCCCC----------cccCcCCCHHHHHHHHHhhhccccccccccccccccCCCCCChHHhhcccccH
Confidence 46899999999999865 666642 258999998 3 6
Q ss_pred hhhhHHHHHHHHHHHHH
Q 008503 373 WTTYRSMAEDAVNAAIK 389 (563)
Q Consensus 373 ~t~a~~~Ae~v~~~i~~ 389 (563)
++.++++|+.++++|..
T Consensus 632 l~~ap~~ae~lA~~i~g 648 (689)
T 3pvc_A 632 LCSAPLVAEILAAQMFG 648 (689)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999999864
No 13
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.94 E-value=1.4e-25 Score=250.43 Aligned_cols=289 Identities=14% Similarity=0.093 Sum_probs=203.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC-CCCCCccCCCCccccchhh---------------HHHHhhccC-
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRSTKLIHGGVRY---------------LEKAVFNLD- 132 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~-~~~g~s~~~~~~~~~g~~~---------------~~~~~~~~~- 132 (563)
..+||+|||||++|+++|+.|+++|++|+||||++ ++.|+|+++.|++++.... ..+.+..+.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 45899999999999999999999999999999974 7778899998888754321 011111110
Q ss_pred ---c------------ccHHHHHHHHHHhhhc-----------------ccCCcceEEEecCceechHHHHHHHHHHHHH
Q 008503 133 ---Y------------GQLKLVFHALEERKQA-----------------KDRSLKGAVVYYDGQMNDSRLNVGLALTAAL 180 (563)
Q Consensus 133 ---~------------~~~~~~~~~l~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~ 180 (563)
. .....+ +.+.+.+.. ......+.+.+..+.++|..++..|.+.+++
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~-~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~ 429 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKI-AQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQ 429 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHH-HHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHH
T ss_pred CcCcCcCCeeeecCCHHHHHHH-HHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHh
Confidence 0 001111 111111100 1111223345668899999999999999999
Q ss_pred CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEecCC
Q 008503 181 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPDY 260 (563)
Q Consensus 181 ~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~~~ 260 (563)
.|++|+++++|++|..++ +++ +|.. .+|. +++|+.||+|+|.|+..+....+.+ +.|.+|+++.++..
T Consensus 430 ~Gv~i~~~t~V~~l~~~~--~~v-~V~t---~~G~--~i~Ad~VVlAtG~~s~~l~~~~~lp----l~p~rGq~~~~~~~ 497 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKD--DCW-LLNF---AGDQ--QATHSVVVLANGHQISRFSQTSTLP----VYSVAGQVSHIPTT 497 (676)
T ss_dssp TTCEEEESCCEEEEEEET--TEE-EEEE---TTSC--EEEESEEEECCGGGGGCSTTTTTCS----CEEEEEEEEEEECC
T ss_pred CCCEEEeCCeeeEEEEeC--CeE-EEEE---CCCC--EEECCEEEECCCcchhccccccCCc----ceeecCEEEEECCC
Confidence 999999999999999876 343 4433 2333 6999999999999998887765432 78999999988653
Q ss_pred cCCCCcccccccCCCCcEEEEeecC---CcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCC-----CCCccc
Q 008503 261 YSPEGMGLIVPKTKDGRVVFMLPWL---GRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVR-----RTDVLS 332 (563)
Q Consensus 261 ~~~~~~~~~~~~~~~g~~~~~~P~~---g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~-----~~~v~~ 332 (563)
........++. .+ .|++|.. |.+++|.+.+. ...+..++.++.+.+++.+.+++ |.+. +..+..
T Consensus 498 ~~~~~l~~~l~--~~---~Yl~P~~~~~g~~~iG~t~~~--~~~d~~~~~~~~~~~l~~l~~~~-P~l~~~~~~d~~~~~ 569 (676)
T 3ps9_A 498 PELAELKQVLC--YD---GYLTPQNPANQHHCIGASYHR--GSEDTAYSEDDQQQNRQRLIDCF-PQAQWAKEVDVSDKE 569 (676)
T ss_dssp TTGGGCCSEEE--SS---SEECCCBTTTTEEEEECCCEE--TCCCCCCCHHHHHHHHHHHHHHS-TTCHHHHTCCCTTCC
T ss_pred cccccCCceeE--CC---eeeccccCCCCeEEEeeccCC--CCCCCCCCHHHHHHHHHHHHHhC-CCccccccCcccccc
Confidence 22111112221 22 4788874 67889988654 23455678889999999999998 5553 234689
Q ss_pred ceeeeeecccCCCCCCCCCccccceEeec-------------------------CCCeEEEecC---hhhhhHHHHHHHH
Q 008503 333 AWSGIRPLAMDPSAKNTESISRDHVVCED-------------------------FPGLVTITGG---KWTTYRSMAEDAV 384 (563)
Q Consensus 333 ~~aG~rp~~~d~~~~~~~~~~~~~~i~~~-------------------------~~gl~~~~Gg---~~t~a~~~Ae~v~ 384 (563)
.|+|+||.++|+. |+|+.. .+|++.++|. +++.++.+|+.++
T Consensus 570 ~~~G~R~~t~D~l----------PiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~a~G~g~~Gl~~Ap~~ae~lA 639 (676)
T 3ps9_A 570 ARCGVRCATRDHL----------PMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILA 639 (676)
T ss_dssp EEEEEEEECTTCC----------CEEEEEECHHHHHHHTTTTTSCCTTCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred eEEEEeCccCCcC----------CccCcCCChHHHHHHHHhhhccccccccCCCCCCEeeeecccccHHHHHHHHHHHHH
Confidence 9999999999864 777642 2589999983 6999999999999
Q ss_pred HHHHH
Q 008503 385 NAAIK 389 (563)
Q Consensus 385 ~~i~~ 389 (563)
++|..
T Consensus 640 ~~i~g 644 (676)
T 3ps9_A 640 AQMSD 644 (676)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 99863
No 14
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.94 E-value=5.2e-26 Score=238.66 Aligned_cols=293 Identities=16% Similarity=0.084 Sum_probs=192.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCC-cc-ccc-hh--hH---HHH---hhc-----
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTK-LI-HGG-VR--YL---EKA---VFN----- 130 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~-~~-~~g-~~--~~---~~~---~~~----- 130 (563)
..++||+|||||++|+++|+.|+++ |++|+|||+++++.++|+++.+ .+ ... .. +. ... +.+
T Consensus 34 ~~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 113 (405)
T 3c4n_A 34 EEAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSG 113 (405)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSS
T ss_pred cCcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCC
Confidence 4569999999999999999999999 9999999999888888877766 34 111 00 00 000 000
Q ss_pred --cCcccHHH-----------H--HHHHHHhhhccc-----CCcc-eEEEecCceechHHHHHHHHHHHHHCCCEEEcCc
Q 008503 131 --LDYGQLKL-----------V--FHALEERKQAKD-----RSLK-GAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHA 189 (563)
Q Consensus 131 --~~~~~~~~-----------~--~~~l~~~~~~~~-----~~~~-~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~ 189 (563)
..+..... . .+.+.+...... +... +.+.+.++++++..+...|.+.+.+.|+++++++
T Consensus 114 ~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~ 193 (405)
T 3c4n_A 114 KTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNT 193 (405)
T ss_dssp CCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCC
Confidence 00000000 0 000000000000 2222 3346678899999999999999999999999999
Q ss_pred EEE---------EEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhh-hhcCCCCCeeecCCceEEEecC
Q 008503 190 EVI---------SLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRK-LADQNVQPMICPSSGVHIVLPD 259 (563)
Q Consensus 190 ~v~---------~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~-~~g~~~~~~v~~~~G~~~~~~~ 259 (563)
+|+ ++..++ +++ +|. +.. .+++||.||+|+|.|+..+.+ .++...+ +.|.+|+++.++.
T Consensus 194 ~v~~~~g~~~~~~i~~~~--~~v-~v~-----~~~-g~i~a~~VV~A~G~~s~~l~~~~~g~~~~--~~~~~g~~~~~~~ 262 (405)
T 3c4n_A 194 RAELVPGGVRLHRLTVTN--THQ-IVV-----HET-RQIRAGVIIVAAGAAGPALVEQGLGLHTR--HGRAYRQFPRLDL 262 (405)
T ss_dssp EEEEETTEEEEECBCC----------C-----BCC-EEEEEEEEEECCGGGHHHHHHHHHCCCCC--CEEEEEECCEECS
T ss_pred EEEeccccccccceEeeC--CeE-EEE-----ECC-cEEECCEEEECCCccHHHHHHHhcCCCCC--cccceeEEEEECC
Confidence 999 887654 344 442 222 379999999999999988887 8877643 7888999887764
Q ss_pred CcCCCCcccccccCCCCcEEEEeecC-CcEEeeecCC--CCCCC--------CCCCCCHHHHHHHHHHHhhhccCCCCCC
Q 008503 260 YYSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAGTTDS--DTVIT--------LLPEPHEDEIQFILDAISDYLNVKVRRT 328 (563)
Q Consensus 260 ~~~~~~~~~~~~~~~~g~~~~~~P~~-g~~~iG~t~~--~~~~~--------~~~~~~~~~~~~ll~~~~~~~~~~l~~~ 328 (563)
... ....++. ...+|++|+. +.+++|.++. ..... .+...+.+.++.+++.. ++| |.+...
T Consensus 263 ~~~-~~~~~~~-----~~~~y~~p~~~g~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~-P~l~~~ 334 (405)
T 3c4n_A 263 LSG-AQTPVLR-----ASGLTLRPQNGGYTLVPAIHHRDPHGYHPAGGSLTGVPTGLRRELLEDLVGLM-DAV-PALAGE 334 (405)
T ss_dssp CCC-TTCCEEE-----ETTEEEEEETTEEEEECCCCSCBCSSCCCCCCCBTTBCCSSCHHHHHHHHHHT-TTC-GGGGSS
T ss_pred CCc-cCCCeEE-----CCcEEEEEcCCCeEEEeccccccccCcCcccccccccccCCCHHHHHHHHHHH-HhC-CCcccc
Confidence 221 1112222 1246889985 4567877743 11111 11334567777777654 777 555543
Q ss_pred C---------cccceeeeeecccCCCCCCCCCccccceEeecCCCeEEEecC--hhhhhHHHHHHHHHHHHHc
Q 008503 329 D---------VLSAWSGIRPLAMDPSAKNTESISRDHVVCEDFPGLVTITGG--KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 329 ~---------v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~~~gl~~~~Gg--~~t~a~~~Ae~v~~~i~~~ 390 (563)
. +...|+|+||.++|+. |+|+..++|++.++|. .+|.++.+|+.++++|...
T Consensus 335 ~~~~~r~~~~i~~~w~G~r~~t~D~~----------P~ig~~~~gl~~a~G~~g~~~~ap~~a~~la~~i~~~ 397 (405)
T 3c4n_A 335 GLELGRSSADVPGAWLALPGGRPDAP----------PQAEELAPGLHLLLGGPLADTLGLAAAHELAQRVSAS 397 (405)
T ss_dssp CBCCCSSGGGSCEEEEEEGGGCTTCC----------CEEEEEETTEEEEECCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccceeeEEEeecCcCCCCC----------CEecccCCCeEEEEccCcHHHHHHHHHHHHHHHHhCc
Confidence 3 8899999999998854 8888655899999984 5899999999999999865
No 15
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.93 E-value=3.2e-24 Score=244.73 Aligned_cols=297 Identities=15% Similarity=0.182 Sum_probs=209.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCC--CCCCccCCCCccccchh--hHH-------HHhhccC-----
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF--SSGTSSRSTKLIHGGVR--YLE-------KAVFNLD----- 132 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~--~~g~s~~~~~~~~~g~~--~~~-------~~~~~~~----- 132 (563)
.++||+|||||++|+++|++|+++|+ +|+|||+++. .+|+|+++.|++..... ... +.+.++.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 35899999999999999999999998 9999999975 35677777777643210 000 0111110
Q ss_pred -------------cccHHHH---HHHHHHhhhc----------------ccCCcceE-EEecCceechHHHHHHHHHHHH
Q 008503 133 -------------YGQLKLV---FHALEERKQA----------------KDRSLKGA-VVYYDGQMNDSRLNVGLALTAA 179 (563)
Q Consensus 133 -------------~~~~~~~---~~~l~~~~~~----------------~~~~~~~~-~~~~~~~~~~~~l~~~l~~~a~ 179 (563)
......+ .+.+.+.+.. ......++ +.+.++.++|..++..|.+.+.
T Consensus 83 ~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~ 162 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE 162 (830)
T ss_dssp SEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH
Confidence 0001111 1111111110 11123334 3567889999999999999999
Q ss_pred HCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEecC
Q 008503 180 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPD 259 (563)
Q Consensus 180 ~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~~ 259 (563)
++|++|+++++|++|..++ +++++|.. .+ .+++|+.||+|+|.|+..+.++.|...+ +.|.+++++++..
T Consensus 163 ~~Gv~i~~~t~V~~i~~~~--~~v~~V~t---~~---G~i~Ad~VV~AaG~~s~~l~~~~g~~~p--l~p~~g~~~~~~~ 232 (830)
T 1pj5_A 163 SAGVTYRGSTTVTGIEQSG--GRVTGVQT---AD---GVIPADIVVSCAGFWGAKIGAMIGMAVP--LLPLAHQYVKTTP 232 (830)
T ss_dssp HTTCEEECSCCEEEEEEET--TEEEEEEE---TT---EEEECSEEEECCGGGHHHHHHTTTCCCC--CEEEEEEEEEESC
T ss_pred HcCCEEECCceEEEEEEeC--CEEEEEEE---CC---cEEECCEEEECCccchHHHHHHhCCCcc--ceeceeEEEEEec
Confidence 9999999999999998865 56767653 22 3799999999999999998888887644 8899999988754
Q ss_pred CcCC---------CCcccccccCCCCcEEEEeecCCcEEeeecCCCC--------C-----------CCCCCCCCHHHHH
Q 008503 260 YYSP---------EGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDT--------V-----------ITLLPEPHEDEIQ 311 (563)
Q Consensus 260 ~~~~---------~~~~~~~~~~~~g~~~~~~P~~g~~~iG~t~~~~--------~-----------~~~~~~~~~~~~~ 311 (563)
.... ...+++. ..+ ..+|+.|..+.+++|.+.... . .+.+...+.+.++
T Consensus 233 ~~~~~~~~~~~~~~~~pv~~--~~~-~~~y~r~~~~~l~iG~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~ 309 (830)
T 1pj5_A 233 VPAQQGRNDQPNGARLPILR--HQD-QDLYYREHGDRYGIGSYAHRPMPVDVDTLGAYAPETVSEHHMPSRLDFTLEDFL 309 (830)
T ss_dssp CGGGTTTSCTTTCCCSCEEE--EGG-GTEEEEEETTEEEEEECCSCCCBCCGGGSCCCCGGGCBTTBSTTEECCCHHHHH
T ss_pred CcccccccccccCCCCCeEE--cCC-CCEEEEEeCCeEEEeccCCCCcccCcccccccccccccccccccccCCCHHHHH
Confidence 2110 0112211 112 236778887777888764210 0 0122356788899
Q ss_pred HHHHHHhhhccCCCCCCCcccceeeeeecccCCCCCCCCCccccceEeec--CCCeEEEecChhhhhHHHHHHHHHHHHH
Q 008503 312 FILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED--FPGLVTITGGKWTTYRSMAEDAVNAAIK 389 (563)
Q Consensus 312 ~ll~~~~~~~~~~l~~~~v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~--~~gl~~~~Gg~~t~a~~~Ae~v~~~i~~ 389 (563)
.+++.+.+++ |.+...++.+.|+|+||.++|+. |+|+.. .+|++.++|.+++.++.+|+.++++|..
T Consensus 310 ~l~~~~~~~~-P~l~~~~i~~~w~G~r~~t~D~~----------PiIG~~p~~~gl~va~G~G~~~ap~~g~~la~li~~ 378 (830)
T 1pj5_A 310 PAWEATKQLL-PALADSEIEDGFNGIFSFTPDGG----------PLLGESKELDGFYVAEAVWVTHSAGVAKAMAELLTT 378 (830)
T ss_dssp HHHHHHHHHC-GGGGGSCEEEEEEEEEEECTTSC----------CEEEECSSSBTEEEEESCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-ccccccCcceEEEeecccCCCCC----------eeeccCCCCCCEEEEECchHHhhHHHHHHHHHHHhC
Confidence 9999999999 67888889999999999999854 888874 3799999997799999999999999987
Q ss_pred c
Q 008503 390 S 390 (563)
Q Consensus 390 ~ 390 (563)
.
T Consensus 379 ~ 379 (830)
T 1pj5_A 379 G 379 (830)
T ss_dssp S
T ss_pred C
Confidence 5
No 16
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.93 E-value=2.2e-26 Score=236.67 Aligned_cols=282 Identities=12% Similarity=0.077 Sum_probs=197.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCC------CcEEEEeccCCCCCCccCCCCccccchhhH-HHHhhccCcccHHHHHHHH-
Q 008503 72 LDILVIGGGATGCGVALDAATRG------LRVGLVEREDFSSGTSSRSTKLIHGGVRYL-EKAVFNLDYGQLKLVFHAL- 143 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G------~~V~llEk~~~~~g~s~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~l- 143 (563)
.||+|||||++|+++|++|+++| ++|+|||++..+.++|++++|++++..... ......+....++.+.+.+
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~aS~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNPQEADWSQQTFDYLLSHVH 80 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSGGGTCCCBCCCCSSCCSCTHHHHHHHHHHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCccccCcceeecccCCCchHHHHHHHHHHHHHHHHHhh
Confidence 39999999999999999999998 999999999888899999999887521100 0000000000000000000
Q ss_pred ---------------------------HHhhhc----------ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEE
Q 008503 144 ---------------------------EERKQA----------KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVL 186 (563)
Q Consensus 144 ---------------------------~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~ 186 (563)
.+.+.. ..+.+.+++.+.++.++|..++..|.+.++++|++|+
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~p~~~~~~~~~~~~v~p~~~~~~l~~~~~~~Gv~i~ 160 (351)
T 3g3e_A 81 SPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFF 160 (351)
T ss_dssp STTHHHHTEEEEEEEEEESSCCCCCGGGGTSEEEEECCHHHHTTCTTCCEEEEEEEEEECHHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCCccEEEEEEEEEecCCccccCHHHhCCCceECCHHHhccCCCCceEEEecceEEcHHHHHHHHHHHHHHCCCEEE
Confidence 000000 1123445555557899999999999999999999998
Q ss_pred cCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEecCCcCCCCc
Q 008503 187 NHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPDYYSPEGM 266 (563)
Q Consensus 187 ~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~~~~~~~~~ 266 (563)
+ ++|+++..++ .++|+.||+|+|.|+..+.+. ..+.|.+|+++.++.+. ...
T Consensus 161 ~-~~V~~i~~~~-------------------~~~a~~VV~A~G~~s~~l~~~------~~l~p~rg~~~~~~~~~--~~~ 212 (351)
T 3g3e_A 161 Q-RKVESFEEVA-------------------REGADVIVNCTGVWAGALQRD------PLLQPGRGQIMKVDAPW--MKH 212 (351)
T ss_dssp E-CCCCCHHHHH-------------------HTTCSEEEECCGGGGGGTSCC------TTCEEEEEEEEEEECTT--CCS
T ss_pred E-EEeCCHHHhh-------------------cCCCCEEEECCCcChHhhcCC------CceeecCCcEEEEeCCC--cce
Confidence 8 8887764321 156899999999999887542 23899999999887532 122
Q ss_pred cccccc--CCCCcEEEEeecCCcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcccceeeeeecccCC
Q 008503 267 GLIVPK--TKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDP 344 (563)
Q Consensus 267 ~~~~~~--~~~g~~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~~~~aG~rp~~~d~ 344 (563)
.++... ..++..+|++|..+.+++|++.+. ...+..++.+.++.+++.+.+++ |.+...++.+.|+|+||.++|
T Consensus 213 ~~~~~~~~~~~~~~~y~~p~~~~~~iGg~~~~--~~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~i~~~w~G~r~~t~D- 288 (351)
T 3g3e_A 213 FILTHDPERGIYNSPYIIPGTQTVTLGGIFQL--GNWSELNNIQDHNTIWEGCCRLE-PTLKNARIIGERTGFRPVRPQ- 288 (351)
T ss_dssp EEEECCTTTCTTCSCEEEECSSCEEEECCCEE--TCCCCSCCHHHHHHHHHHHHHHC-GGGGGCEEEEEEEEEEEECSS-
T ss_pred EEEeccccCCCCceeEEEeCCCcEEEeeeeec--CCCCCCCCHHHHHHHHHHHHHhC-CCccCCcEeeeeEeeCCCCCC-
Confidence 222110 123345789998778899988754 23455678899999999999999 678778899999999999987
Q ss_pred CCCCCCCccccceEeec--CCCeEEEecC---hhhhhHHHHHHHHHHHHHcC
Q 008503 345 SAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDAVNAAIKSG 391 (563)
Q Consensus 345 ~~~~~~~~~~~~~i~~~--~~gl~~~~Gg---~~t~a~~~Ae~v~~~i~~~~ 391 (563)
. .+ ..++|+.. .+|++.++|. ++|.++.+|+.+++++.+.+
T Consensus 289 ~-----p~-~~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~~~~ 334 (351)
T 3g3e_A 289 I-----RL-EREQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRIL 334 (351)
T ss_dssp C-----EE-EEEEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred c-----cc-eeeeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHHHHH
Confidence 4 00 11345443 3689999983 69999999999999998763
No 17
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.93 E-value=1.8e-24 Score=223.96 Aligned_cols=292 Identities=16% Similarity=0.130 Sum_probs=193.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC--ccCCCCccccch----hh----------HHHHh-hcc--
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT--SSRSTKLIHGGV----RY----------LEKAV-FNL-- 131 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~--s~~~~~~~~~g~----~~----------~~~~~-~~~-- 131 (563)
++||+|||||++|+++|++|+++|++|+|||+++.+.++ +..++++++..+ .+ +++.. ...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 489999999999999999999999999999999765432 223333443211 01 11110 000
Q ss_pred C--------------cccHHHHHHHHHHhhhc----------------ccCC-cceEEEecCceechHHHHHHHHHHHHH
Q 008503 132 D--------------YGQLKLVFHALEERKQA----------------KDRS-LKGAVVYYDGQMNDSRLNVGLALTAAL 180 (563)
Q Consensus 132 ~--------------~~~~~~~~~~l~~~~~~----------------~~~~-~~~~~~~~~~~~~~~~l~~~l~~~a~~ 180 (563)
. ...+....+.+.+.+.. ..+. ..+.+.+.+++++|.+++..|.+.+.+
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 161 (372)
T 2uzz_A 82 PIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE 161 (372)
T ss_dssp CSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHHH
T ss_pred cceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHHH
Confidence 0 00011111222221110 0112 223446778999999999999999999
Q ss_pred CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEecCC
Q 008503 181 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPDY 260 (563)
Q Consensus 181 ~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~~~ 260 (563)
.|++++++++|+++..+++ .+ .|.. .++ +++||.||+|+|.|+..+.. ..| +.|.+|+++.+...
T Consensus 162 ~G~~i~~~~~V~~i~~~~~--~~-~v~~---~~g---~~~a~~vV~a~G~~s~~l~~----~l~--~~p~rg~~~~~~~~ 226 (372)
T 2uzz_A 162 AGCAQLFNCPVTAIRHDDD--GV-TIET---ADG---EYQAKKAIVCAGTWVKDLLP----ELP--VQPVRKVFAWYQAD 226 (372)
T ss_dssp TTCEEECSCCEEEEEECSS--SE-EEEE---SSC---EEEEEEEEECCGGGGGGTST----TCC--CEEEECCEEEECCC
T ss_pred CCCEEEcCCEEEEEEEcCC--EE-EEEE---CCC---eEEcCEEEEcCCccHHhhcc----ccC--ceEEEEEEEEEEec
Confidence 9999999999999988753 33 3432 233 59999999999999987755 222 78889988777543
Q ss_pred c-CC--CCcccccccCCCCcEEEEeec-CCcEEeeecCCC--CC---CCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcc
Q 008503 261 Y-SP--EGMGLIVPKTKDGRVVFMLPW-LGRTVAGTTDSD--TV---ITLLPEPHEDEIQFILDAISDYLNVKVRRTDVL 331 (563)
Q Consensus 261 ~-~~--~~~~~~~~~~~~g~~~~~~P~-~g~~~iG~t~~~--~~---~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~ 331 (563)
. .. ...+.+.....++..+|++|. ++.+++|.+... .+ ...+...+.+..+.+++.+.+++ |.+. ++.
T Consensus 227 ~~~~~~~~~p~~~~~~~~~~~~y~~p~~~~~~~iG~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-P~l~--~~~ 303 (372)
T 2uzz_A 227 GRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERVPFAEVVSDGSEAFPFLRNVL-PGIG--CCL 303 (372)
T ss_dssp GGGSTTTTCCEEEEECTTCCEEEEECCSSSCEEEEESSCCEECCSGGGCCCTTTSTTGGGSSHHHHHHHS-CSCC--CEE
T ss_pred cccCccccCCEEEEecCCCCeEEecCCCCCeEEEEecCCCCccCChhhccCCCCCHHHHHHHHHHHHHHC-CCCC--ccc
Confidence 1 11 011222221234556788886 467888886521 11 11223344566778999999999 6675 678
Q ss_pred cceeeeeecccCCCCCCCCCccccceEeec--CCCeEEEecC---hhhhhHHHHHHHHHHHHHc
Q 008503 332 SAWSGIRPLAMDPSAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 332 ~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~--~~gl~~~~Gg---~~t~a~~~Ae~v~~~i~~~ 390 (563)
..|+|+||.++|+. |+|+.. .+|++.++|. +++.++.+|+.++++|...
T Consensus 304 ~~~~g~r~~t~d~~----------p~ig~~~~~~~l~~~~G~~g~G~~~ap~~g~~la~~i~~~ 357 (372)
T 2uzz_A 304 YGAACTYDNSPDED----------FIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDK 357 (372)
T ss_dssp EECCCEEEECTTSC----------CCEEEETTEEEEEEECCCCSCCGGGHHHHHHHHHHHHTTC
T ss_pred eeeEEeeccCCCCC----------eEEecCCCCCCEEEEeCCCccchhccHHHHHHHHHHHhCC
Confidence 89999999998854 888764 3689999983 6999999999999998754
No 18
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.93 E-value=4.6e-25 Score=227.95 Aligned_cols=280 Identities=19% Similarity=0.146 Sum_probs=187.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCcc-----CCCCccccchh----------------hHHHH
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSS-----RSTKLIHGGVR----------------YLEKA 127 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~-----~~~~~~~~g~~----------------~~~~~ 127 (563)
..++||+|||||++|+++|++|+++|++|+|||+..++.|+|. .+.+.+..... ++.+.
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVEL 83 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHHh
Confidence 3468999999999999999999999999999999987776443 33343322110 00110
Q ss_pred hhc-cCcc----------cHHHHHHHHHHhhh---c-cc---CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCc
Q 008503 128 VFN-LDYG----------QLKLVFHALEERKQ---A-KD---RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHA 189 (563)
Q Consensus 128 ~~~-~~~~----------~~~~~~~~l~~~~~---~-~~---~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~ 189 (563)
... .... +.....+.+.+.+. . .. +.+..++.+.++.++|..++..|.+.+.+.|+++++ +
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~p~~~~g~~~~~~~v~p~~~~~~l~~~~~~~G~~i~~-~ 162 (363)
T 1c0p_A 84 VPTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFER-R 162 (363)
T ss_dssp TTTTSSEEEEEEEEEESSGGGGGGGTTTTTSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEE-C
T ss_pred CcccCCeEEECCEEEEecCccchhHHHHHhCCCcEECCHHHCCCceEEEEEecceecHHHHHHHHHHHHHHCCCEEEE-E
Confidence 000 0000 00000000000000 0 00 122234444678899999999999999999999998 8
Q ss_pred EEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCeeecCCceEEEecCCcCCCCcccc
Q 008503 190 EVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMICPSSGVHIVLPDYYSPEGMGLI 269 (563)
Q Consensus 190 ~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~~~~~~~~~~~~~~~ 269 (563)
+|+++..+ . + +|+.||+|+|.|+..+..+. . ..+.|.+|+++.++... +.. .+.
T Consensus 163 ~v~~l~~~--------------~-----~-~a~~VV~A~G~~s~~l~~~~--~--~~~~p~rg~~~~~~~~~-~~~-~~~ 216 (363)
T 1c0p_A 163 TVTSLEQA--------------F-----D-GADLVVNATGLGAKSIAGID--D--QAAEPIRGQTVLVKSPC-KRC-TMD 216 (363)
T ss_dssp CCSBGGGT--------------C-----S-SCSEEEECCGGGGGTSBTTC--C--TTEEEEEEEEEEEECCC-CCC-EEE
T ss_pred EcccHhhc--------------C-----c-CCCEEEECCCcchhhccCcc--c--CCccccCCeEEEEeCCc-ccc-eEe
Confidence 88776321 0 1 78999999999998876542 2 23899999999886543 211 111
Q ss_pred cccCCCCcEEEEeec-CCcEEeeecCCCCCCCCCCCCCHHHHHHHHHHHhhhccCCC------CCCCcccceeeeeeccc
Q 008503 270 VPKTKDGRVVFMLPW-LGRTVAGTTDSDTVITLLPEPHEDEIQFILDAISDYLNVKV------RRTDVLSAWSGIRPLAM 342 (563)
Q Consensus 270 ~~~~~~g~~~~~~P~-~g~~~iG~t~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~l------~~~~v~~~~aG~rp~~~ 342 (563)
+ ..++...|++|. +|.+++|.+.+.. ..+..++.+.++.+++.+.+++ |.+ ...++++.|+|+||.++
T Consensus 217 ~--~~~~~~~y~~p~~~g~~~iG~t~~~~--~~~~~~~~~~~~~l~~~~~~~~-P~l~~~~~~~~~~i~~~w~G~rp~t~ 291 (363)
T 1c0p_A 217 S--SDPASPAYIIPRPGGEVICGGTYGVG--DWDLSVNPETVQRILKHCLRLD-PTISSDGTIEGIEVLRHNVGLRPARR 291 (363)
T ss_dssp C--SCTTCCEEEEEETTTEEEEECCCEET--CCCCSCCHHHHHHHHHHHHHHC-GGGSSSSSGGGCEEEEEEEEEEEEET
T ss_pred e--ccCCCcEEEEEcCCCEEEEEeeeccC--CCCCCCCHHHHHHHHHHHHHhC-ccccCCcccccceEeeceEEECCCCC
Confidence 1 112233788887 4688899886542 2455678899999999999999 666 34678999999999998
Q ss_pred CCCCCCCCCccccceEeec-----------------------C--CCeEEEecC---hhhhhHHHHHHHHHHHHHc
Q 008503 343 DPSAKNTESISRDHVVCED-----------------------F--PGLVTITGG---KWTTYRSMAEDAVNAAIKS 390 (563)
Q Consensus 343 d~~~~~~~~~~~~~~i~~~-----------------------~--~gl~~~~Gg---~~t~a~~~Ae~v~~~i~~~ 390 (563)
|+. |++... . +|++.++|. +++.++++|+.+++++.+.
T Consensus 292 d~~----------piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~G~~~a~~~g~~~a~li~~~ 357 (363)
T 1c0p_A 292 GGP----------RVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEA 357 (363)
T ss_dssp TSC----------EEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCc----------eeEEEecccccccccCccccccccccccccccceEEEecCCCCcchheeccHHHHHHHHHHHH
Confidence 854 554431 1 578999883 6999999999999999875
No 19
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.92 E-value=9.5e-24 Score=223.68 Aligned_cols=296 Identities=16% Similarity=0.123 Sum_probs=191.1
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCCCCCccC-CCC-cccc---chhhH---------HHH---hhc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSGTSSR-STK-LIHG---GVRYL---------EKA---VFN 130 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~~g~s~~-~~~-~~~~---g~~~~---------~~~---~~~ 130 (563)
+.++||||||||++|+++|++|+++|+ +|+|||+++..++.++. +.+ ++.. ...+. ... +.+
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 83 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKN 83 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHHHhh
Confidence 456999999999999999999999999 99999999766554432 111 1111 11111 000 000
Q ss_pred cC-----c------------ccHHHHHHHHHHh-h----hc--------c------cCCcc---eEEEecC-ceechHHH
Q 008503 131 LD-----Y------------GQLKLVFHALEER-K----QA--------K------DRSLK---GAVVYYD-GQMNDSRL 170 (563)
Q Consensus 131 ~~-----~------------~~~~~~~~~l~~~-~----~~--------~------~~~~~---~~~~~~~-~~~~~~~l 170 (563)
+. + .....+.+.+... + .+ . ...+. +.+.+.+ +.+++..+
T Consensus 84 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~~~~ 163 (438)
T 3dje_A 84 DPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNA 163 (438)
T ss_dssp CTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHHHH
T ss_pred CccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecHHHH
Confidence 00 0 0011111111100 0 00 0 11222 3345667 89999999
Q ss_pred HHHHHHHHHHCCCEEEcCc---EEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCCCCee
Q 008503 171 NVGLALTAALAGAAVLNHA---EVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQPMI 247 (563)
Q Consensus 171 ~~~l~~~a~~~G~~i~~~~---~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~~~v 247 (563)
+..|.+.+++.|++|++++ +|++|..++ ++++||++ .+| .+++||.||+|+|.|+..+.. ++. .+
T Consensus 164 ~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t---~~G--~~i~Ad~VV~AtG~~s~~l~~-l~~----~~ 231 (438)
T 3dje_A 164 LVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVT---ADG--KIWRAERTFLCAGASAGQFLD-FKN----QL 231 (438)
T ss_dssp HHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEE---TTT--EEEECSEEEECCGGGGGGTSC-CTT----CC
T ss_pred HHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEE---CCC--CEEECCEEEECCCCChhhhcC-ccc----ce
Confidence 9999999999999999999 999999875 67877865 334 379999999999999998876 222 25
Q ss_pred ecCCceEEEecCCcC----CCCcccccccCCCCcEEEEeec-CCc-EEeeecCCCC------------CCCC-CCCCCHH
Q 008503 248 CPSSGVHIVLPDYYS----PEGMGLIVPKTKDGRVVFMLPW-LGR-TVAGTTDSDT------------VITL-LPEPHED 308 (563)
Q Consensus 248 ~~~~G~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~P~-~g~-~~iG~t~~~~------------~~~~-~~~~~~~ 308 (563)
.|.+.+...++-... ....+++.. .+..+|+.|. ++. +++|...... ..+. ....+.+
T Consensus 232 ~p~~~~~~~~~l~~~~~~~~~~~p~~~~---~~~~~~~~p~~~~~~l~i~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~ 308 (438)
T 3dje_A 232 RPTAWTLVHIALKPEERALYKNIPVIFN---IERGFFFEPDEERGEIKICDEHPGYTNMVQSADGTMMSIPFEKTQIPKE 308 (438)
T ss_dssp EEEEEEEEEEECCGGGHHHHTTCCEEEE---TTTEEECSCCTTTCEEEEEECCSCEECEEECTTCCEEECCCCCSSCBHH
T ss_pred eeEEEEEEEEEcChHHhhhhcCCCEEEE---CCCceecCCCCCCCeEEEEeCCCCccCCccCCCcccccCCcccccCCHH
Confidence 565444333321110 011223321 1244666666 333 5564211000 0011 2345577
Q ss_pred HHHHHHHHHhhhccCCCCCCCcccceeeeeecccCCCCCCCCCccccceEeec--CCCeEEEecC---hhhhhHHHHHHH
Q 008503 309 EIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCED--FPGLVTITGG---KWTTYRSMAEDA 383 (563)
Q Consensus 309 ~~~~ll~~~~~~~~~~l~~~~v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~~--~~gl~~~~Gg---~~t~a~~~Ae~v 383 (563)
..+.+.+.+.++| |.+...++.+.|+|+||.++|+. |+|+.. .+|++.++|. +++.++.+|+.+
T Consensus 309 ~~~~l~~~~~~~~-P~l~~~~~~~~~~g~~~~t~D~~----------piig~~p~~~~l~~a~G~~g~G~~~ap~~g~~l 377 (438)
T 3dje_A 309 AETRVRALLKETM-PQLADRPFSFARICWCADTANRE----------FLIDRHPQYHSLVLGCGASGRGFKYLPSIGNLI 377 (438)
T ss_dssp HHHHHHHHHHHHC-GGGTTCCCSEEEEEEEEECTTSC----------CEEEECSSCTTEEEEECCTTCCGGGTTTHHHHH
T ss_pred HHHHHHHHHHHhC-cccccCCcceeeEEEeCcCCCCC----------eEEeecCCCCCEEEEECCCCcchhhhHHHHHHH
Confidence 7889999999999 78888889999999999999854 888874 4799999983 699999999999
Q ss_pred HHHHHHc
Q 008503 384 VNAAIKS 390 (563)
Q Consensus 384 ~~~i~~~ 390 (563)
+++|...
T Consensus 378 a~~i~g~ 384 (438)
T 3dje_A 378 VDAMEGK 384 (438)
T ss_dssp HHHHHTC
T ss_pred HHHHhCC
Confidence 9999754
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.72 E-value=4e-16 Score=162.42 Aligned_cols=297 Identities=18% Similarity=0.182 Sum_probs=159.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
++||+|||||++|+++|+.|+++|++|+|||+++..++ +..+.+.+. .+.+......... . .............
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~-~~~~~~~~~--~~~~~~lg~~~~~-~--~~~~~~~~~~~~~ 77 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS-PVRCGEGLS--KGILNEADIKADR-S--FIANEVKGARIYG 77 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC-SCCSCCEEE--THHHHHTTCCCCT-T--TEEEEESEEEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC-CcccccccC--HHHHHHcCCCCCh-H--HhhhhcceEEEEc
Confidence 58999999999999999999999999999999964322 222222211 1222221000000 0 0000000000000
Q ss_pred cCCcc-eEE------EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCe
Q 008503 151 DRSLK-GAV------VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKV 223 (563)
Q Consensus 151 ~~~~~-~~~------~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~ 223 (563)
..... ..+ .+....++...+...|.+.+.+.|++++++++|+++..++ +++.+|.+.+ .+...+++||.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~--~~~~~~~~a~~ 153 (397)
T 3cgv_A 78 PSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRH--NNEIVDVRAKM 153 (397)
T ss_dssp TTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEE--TTEEEEEEEEE
T ss_pred CCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEE--CCeEEEEEcCE
Confidence 00000 011 1113456788889999999999999999999999998875 6788888764 34456899999
Q ss_pred EEEccCcChhhhhhhhcCCC-CC-eeecCCceEEEecCCcCCCCc-ccccccCCCCcEEEEeecC-CcEEeeecCCCCCC
Q 008503 224 VVNAAGPFCDSVRKLADQNV-QP-MICPSSGVHIVLPDYYSPEGM-GLIVPKTKDGRVVFMLPWL-GRTVAGTTDSDTVI 299 (563)
Q Consensus 224 VI~AtG~~s~~l~~~~g~~~-~~-~v~~~~G~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~P~~-g~~~iG~t~~~~~~ 299 (563)
||+|+|.+| .+.+.+|... +. ......+....++....+... .+.+.....+..+|++|.. +...+|.+....
T Consensus 154 vV~A~G~~s-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~-- 230 (397)
T 3cgv_A 154 VIAADGFES-EFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSIN-- 230 (397)
T ss_dssp EEECCCTTC-HHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETT--
T ss_pred EEECCCcch-HhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccc--
Confidence 999999999 5677777653 11 001111222333322222221 1222111345578889975 455566554321
Q ss_pred CCCCCCCHHHHHHHHHHHhhhccCCCCCCCcccceeeeeecccCCCCCCCCCccccceEee-cCCCeEEE-ecChhhhhH
Q 008503 300 TLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCE-DFPGLVTI-TGGKWTTYR 377 (563)
Q Consensus 300 ~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~-~~~gl~~~-~Gg~~t~a~ 377 (563)
. ..........++...+.+ +.+...++...|.|..|+... ......+.++.. +..+.++- +|.++..+.
T Consensus 231 --~-~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~p~~~~-----~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~ 301 (397)
T 3cgv_A 231 --W-IHNRFELKNYLDRFIENH-PGLKKGQDIQLVTGGVSVSKV-----KMPITMPGLMLVGDAARLIDPITGGGIANAI 301 (397)
T ss_dssp --T-CSCHHHHHHHHHHHHHTC-HHHHTSEEEEEEEEEEECCCC-----CSCCEETTEEECGGGGTCSCTTTCCCHHHHH
T ss_pred --c-ccCCCCHHHHHHHHHHhC-cCCCCCeEEeeeeeeeecCCC-----ccceeeCCEEEEEccccCCCCCCCCCHHHHH
Confidence 1 122334444444433333 234455677888998887421 111112223332 22344442 343555555
Q ss_pred HHHHHHHHHHHH
Q 008503 378 SMAEDAVNAAIK 389 (563)
Q Consensus 378 ~~Ae~v~~~i~~ 389 (563)
.-|..+++.+.+
T Consensus 302 ~~a~~la~~l~~ 313 (397)
T 3cgv_A 302 VSGMYAAQVTKE 313 (397)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555544
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.70 E-value=2.9e-16 Score=165.06 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=103.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+.++||+|||||++|+++|+.|+++|++|+|||+.++.....+ ..+.......+... . +.+.+.+...
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g--~~~~~~~~~~l~~~----g------~~~~~~~~~~ 70 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIG--ESLLPRCMEHLDEA----G------FLDAVKAQGF 70 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSC--CBCCGGGHHHHHHT----T------CHHHHHHTTC
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc--CcccHhHHHHHHHc----C------ChHHHHHcCC
Confidence 4569999999999999999999999999999999864332111 22223333333321 0 1122222211
Q ss_pred c-------ccCCcceEE---------EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECC
Q 008503 149 A-------KDRSLKGAV---------VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNL 212 (563)
Q Consensus 149 ~-------~~~~~~~~~---------~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~ 212 (563)
. ........+ ......+++..+...|.+.+.+.|++++++++|+++..+++ .+ .+.+.+ .
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~~-~v~v~~-~ 146 (421)
T 3nix_A 71 QQKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGT--DS-VTTIED-I 146 (421)
T ss_dssp EEECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETT--EE-EEEEEE-T
T ss_pred cccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--EE-EEEEEc-C
Confidence 1 000000000 11123577889999999999999999999999999998753 32 244444 4
Q ss_pred CCcEEEEEeCeEEEccCcChhhhhhhhcCCCC
Q 008503 213 SGKEFDTYAKVVVNAAGPFCDSVRKLADQNVQ 244 (563)
Q Consensus 213 ~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~~ 244 (563)
+|+..+++||.||+|+|.++ .+.+.++.+.+
T Consensus 147 ~g~~~~~~a~~vV~A~G~~s-~l~~~~g~~~~ 177 (421)
T 3nix_A 147 NGNKREIEARFIIDASGYGR-VIPRMFGLDKP 177 (421)
T ss_dssp TSCEEEEEEEEEEECCGGGC-HHHHHTTCEEC
T ss_pred CCCEEEEEcCEEEECCCCch-hhHHhcCCCCC
Confidence 56656899999999999998 56677776533
No 22
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.67 E-value=2e-15 Score=156.67 Aligned_cols=251 Identities=20% Similarity=0.237 Sum_probs=134.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
+|||+|||||++|+++|+.|+++|++|+||||.+.. +....+++.+.. +.++........... ...+. ...+.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~-~~~~~~g~~l~~--~~l~~l~~~~~~~~~---~~~~~-~~~~~ 76 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI-GSPVRCGEGLSK--GILNEADIKADRSFI---ANEVK-GARIY 76 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST-TCSCCSCCEEET--HHHHHTTCCCCTTTE---EEEES-EEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC-CCCCceecccCH--HHHHHcCCCchhhhh---hcccc-eEEEE
Confidence 599999999999999999999999999999997522 222222222221 112111000000000 00000 00000
Q ss_pred cC-Ccce-EEE------ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeC
Q 008503 151 DR-SLKG-AVV------YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAK 222 (563)
Q Consensus 151 ~~-~~~~-~~~------~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~ 222 (563)
.+ .... .+. .....++...+...|.+.+.+.|++++++++|+++..++ +++.++.... +++..+++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~--~~~~~~~~a~ 152 (397)
T 3oz2_A 77 GPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRH--NNEIVDVRAK 152 (397)
T ss_dssp CTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEE--TTEEEEEEEE
T ss_pred eCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecc--cccceEEEEe
Confidence 00 0000 000 111246778888899999999999999999999998876 6787776653 5566789999
Q ss_pred eEEEccCcChhhhhhhhcCCCCCeeecCCceEE-----EecCCcCCCCcccccccCCCCcEEEEeecC-CcEEeeecCCC
Q 008503 223 VVVNAAGPFCDSVRKLADQNVQPMICPSSGVHI-----VLPDYYSPEGMGLIVPKTKDGRVVFMLPWL-GRTVAGTTDSD 296 (563)
Q Consensus 223 ~VI~AtG~~s~~l~~~~g~~~~~~v~~~~G~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~-g~~~iG~t~~~ 296 (563)
+||.|+|.+|. +++.++...+ ..+...... .......+....+.+.....+...++.|.. +...+|.....
T Consensus 153 ~vIgAdG~~S~-vr~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~ 229 (397)
T 3oz2_A 153 MVIAADGFESE-FGRWAGLKSV--ILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSI 229 (397)
T ss_dssp EEEECCCTTCH-HHHHHTCGGG--CCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEET
T ss_pred EEEeCCccccH-HHHHcCCCcc--cccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeecc
Confidence 99999999885 5555655421 111111111 111111221111222212234456677764 44444433211
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhccCCCCCCCcccceeeeeecc
Q 008503 297 TVITLLPEPHEDEIQFILDAISDYLNVKVRRTDVLSAWSGIRPLA 341 (563)
Q Consensus 297 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~v~~~~aG~rp~~ 341 (563)
+.......++..++...+.. +.+.....+..+.|..|..
T Consensus 230 -----~~~~~~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~~~~~~ 268 (397)
T 3oz2_A 230 -----NWIHNRFELKNYLDRFIENH-PGLKKGQDIQLVTGGVSVS 268 (397)
T ss_dssp -----TTSCSHHHHHHHHHHHHHTC-HHHHTSEEEEEEEEEEECC
T ss_pred -----chhhhhhhHHHHHHHHHHhC-ccccccceeeeeecccccc
Confidence 11123444555555444333 3344445566777777764
No 23
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.62 E-value=6.5e-16 Score=178.00 Aligned_cols=57 Identities=12% Similarity=0.069 Sum_probs=53.1
Q ss_pred CCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCCH-HH
Q 008503 475 GYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWDK-SR 534 (563)
Q Consensus 475 c~~v~~~ei~~ai~~e~~~~~~D~l~rRtr~g~g~~~~g~~~~~~v~~~la~~l~~~~-~~ 534 (563)
||+||++||+.||++ +++..+.|||+||+||| +|||++|.+.+.+||++++|+++ .+
T Consensus 487 c~~vt~~~i~~a~~~--g~~~~~~~k~~t~~g~g-~cqg~~c~~~~~~~~~~~~~~~~~~~ 544 (965)
T 2gag_A 487 QRDQTVADVLRATGA--GMKSVEHIKRYTSISTA-NDQGKTSGVAAIGVIAAVLGIENPAA 544 (965)
T ss_dssp TTTEEHHHHHHHHHH--TCCSHHHHHHHHCTTCS-TTTTTTTHHHHHHHHHHHTTCSCGGG
T ss_pred CCCCcHHHHHHHHHh--CCCCHHHHHHHhcCccc-CcCCcccHHHHHHHHHHHHCcCcccc
Confidence 999999999999986 77788889999999998 79999999999999999999987 44
No 24
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.59 E-value=3.8e-14 Score=154.64 Aligned_cols=165 Identities=22% Similarity=0.235 Sum_probs=111.0
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchh-hHHH---------Hhhc----c-C
Q 008503 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVR-YLEK---------AVFN----L-D 132 (563)
Q Consensus 68 ~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~-~~~~---------~~~~----~-~ 132 (563)
++.++||||||||++|+++|+.|+++|++|+||||.+..+|+|..+.+.++.... .... .... - .
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3567999999999999999999999999999999998777777776665543211 1110 0000 0 0
Q ss_pred cccHHH----------HHHHHHHhhhccc-------CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEE
Q 008503 133 YGQLKL----------VFHALEERKQAKD-------RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLI 195 (563)
Q Consensus 133 ~~~~~~----------~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~ 195 (563)
...... ..+.+.+.+.... ..+...+.+.++.+.+..+...|.+.+.+.|++|+++++|++|.
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~ 277 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLV 277 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEE
Confidence 000011 1122222221110 00111222334445678889999999999999999999999999
Q ss_pred EcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhh
Q 008503 196 KDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 196 ~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
.+++ ++|+||++.+ .+|+...++||.||+|||.|+..
T Consensus 278 ~~~~-g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 278 VNDD-HSVVGAVVHG-KHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp ECTT-SBEEEEEEEE-TTTEEEEEEEEEEEECCCCCTTC
T ss_pred ECCC-CcEEEEEEEe-CCCcEEEEEcCEEEEecCCcccC
Confidence 8754 6899998875 45655679999999999999864
No 25
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.58 E-value=2.8e-14 Score=153.88 Aligned_cols=158 Identities=25% Similarity=0.349 Sum_probs=102.9
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchh-hHHHHhhccCcccHHHHHHHHHHh
Q 008503 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVR-YLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 68 ~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
.+.++||+|||||++|+++|+.|+++|++|+|||+.++.....+ ..+...... .+.. +. +.+.+.+.
T Consensus 4 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g--~~~~~~~~~~~l~~----lg------l~~~~~~~ 71 (512)
T 3e1t_A 4 RPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIG--ESLLPATVHGICAM----LG------LTDEMKRA 71 (512)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSC--CBCCHHHHTTHHHH----TT------CHHHHHTT
T ss_pred CCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCC--cccCcchHHHHHHH----hC------cHHHHHHc
Confidence 35569999999999999999999999999999999964332211 112221111 1111 00 11122211
Q ss_pred hhc--------ccCCcce-EE---------EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEE
Q 008503 147 KQA--------KDRSLKG-AV---------VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARI 208 (563)
Q Consensus 147 ~~~--------~~~~~~~-~~---------~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~ 208 (563)
... ....... .+ ......++...+...|.+.+.+.|++++++++|+++..++ +++.+|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~ 149 (512)
T 3e1t_A 72 GFPIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRY 149 (512)
T ss_dssp TCCEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEE
T ss_pred CCccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEE
Confidence 111 0000000 00 0112346778899999999999999999999999999875 68888888
Q ss_pred EECCCCcEEEEEeCeEEEccCcChhhhhhhhcC
Q 008503 209 RNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 241 (563)
Q Consensus 209 ~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~ 241 (563)
.+ .+|+..+++||.||+|+|.+|.. ++.++.
T Consensus 150 ~~-~dG~~~~i~ad~VI~AdG~~S~v-r~~lg~ 180 (512)
T 3e1t_A 150 RN-TEGVELMAHARFIVDASGNRTRV-SQAVGE 180 (512)
T ss_dssp EC-SSSCEEEEEEEEEEECCCTTCSS-GGGTCC
T ss_pred Ee-CCCCEEEEEcCEEEECCCcchHH-HHHcCC
Confidence 75 45655689999999999999854 444454
No 26
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.57 E-value=4.1e-13 Score=142.52 Aligned_cols=164 Identities=20% Similarity=0.271 Sum_probs=101.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCC-CCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFS-SGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~-~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
.++||+|||||++|+++|+.|+++|++|+|||+.+.. .|... ....+ +.+.+.+......... .+.... ....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~-~g~~l--~~~~l~~lg~~~~~~~--~~~~~~-~~~~ 78 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKP-CGDAV--SKAHFDKLGMPYPKGE--ELENKI-NGIK 78 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSC-CCCEE--EHHHHHHTTCCCCCGG--GEEEEE-EEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccc-ccccc--cHHHHHHhcCCCCchH--HHHhhh-cceE
Confidence 3589999999999999999999999999999998632 22211 11111 2222222100000000 000000 0000
Q ss_pred cccCCcceEE--EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEE
Q 008503 149 AKDRSLKGAV--VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVN 226 (563)
Q Consensus 149 ~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~ 226 (563)
...+.....+ ......++...+...|.+.+.+.|++++++++|+++..++ +++++|++.+..+|+..+++||.||.
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 79 LYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVE 156 (453)
T ss_dssp EECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEE
T ss_pred EECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEE
Confidence 0000000011 1112346778899999999999999999999999998875 67888888652256556899999999
Q ss_pred ccCcChhhhhhhhcCC
Q 008503 227 AAGPFCDSVRKLADQN 242 (563)
Q Consensus 227 AtG~~s~~l~~~~g~~ 242 (563)
|+|.+|. +.+..+..
T Consensus 157 AdG~~s~-vr~~l~~~ 171 (453)
T 3atr_A 157 ATGYSRS-FRSKLPPE 171 (453)
T ss_dssp CCGGGCT-TGGGSCTT
T ss_pred CcCCchh-hHHhcCCC
Confidence 9999886 55555544
No 27
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.57 E-value=4.6e-14 Score=152.03 Aligned_cols=162 Identities=23% Similarity=0.281 Sum_probs=107.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCcccc--chhhHHHHh-------------hccC-
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHG--GVRYLEKAV-------------FNLD- 132 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~--g~~~~~~~~-------------~~~~- 132 (563)
+.+|||||||+|++|+++|+.|+++|++|+||||.+..+|+|..+.|.++. +..+..... ....
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 356999999999999999999999999999999998888888877776532 222221110 0000
Q ss_pred cccHH----------HHHHHHHHhhhcccCCc----------ceEEEec---------------------------Ccee
Q 008503 133 YGQLK----------LVFHALEERKQAKDRSL----------KGAVVYY---------------------------DGQM 165 (563)
Q Consensus 133 ~~~~~----------~~~~~l~~~~~~~~~~~----------~~~~~~~---------------------------~~~~ 165 (563)
..... ...+.+.+.+....... .....+. .+..
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~ 198 (510)
T 4at0_A 119 GADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEK 198 (510)
T ss_dssp SCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTB
T ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccccC
Confidence 00011 11223333222110000 0000000 1122
Q ss_pred chH-HHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEe-CeEEEccCcChh
Q 008503 166 NDS-RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYA-KVVVNAAGPFCD 233 (563)
Q Consensus 166 ~~~-~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A-~~VI~AtG~~s~ 233 (563)
... .+...|.+.+++.|++|+++++|++|..+++ ++|+||++.+ +++..+|+| |.||+|||.|+.
T Consensus 199 ~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQ--YGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp CTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEE--TTEEEEEEEEEEEEECCCCCTT
T ss_pred CCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEE--CCcEEEEEeCCeEEEeCCChhh
Confidence 233 7888999999999999999999999998744 7999999875 455568999 599999999984
No 28
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.56 E-value=1.5e-13 Score=149.02 Aligned_cols=161 Identities=24% Similarity=0.263 Sum_probs=104.6
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 68 ~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.+.++||+|||||++|+++|+.|+++|++|+||||.+... ..++..++...+.+.+++.. +.+.+.+.+
T Consensus 2 ~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~-~~~~~~~l~~~~~~~l~~lG----------l~~~~~~~~ 70 (535)
T 3ihg_A 2 NDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLS-PYPRAAGQNPRTMELLRIGG----------VADEVVRAD 70 (535)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCC-CCCCSCCBCHHHHHHHHHTT----------CHHHHHHSC
T ss_pred CCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC-CCCccceECHHHHHHHHHcC----------CHHHHHhhC
Confidence 4567999999999999999999999999999999986322 23333444444444443210 011111111
Q ss_pred hcccC----------Ccce-EE-----------------Eec-CceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcC
Q 008503 148 QAKDR----------SLKG-AV-----------------VYY-DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDE 198 (563)
Q Consensus 148 ~~~~~----------~~~~-~~-----------------~~~-~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~ 198 (563)
..... ...+ .+ .+. ...++...+...|.+.+.+.|++++++++|+++..++
T Consensus 71 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~ 150 (535)
T 3ihg_A 71 DIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHD 150 (535)
T ss_dssp CSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEEC
T ss_pred CCcccccceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECC
Confidence 10000 0000 00 011 3346678888999999999999999999999999875
Q ss_pred CCCcEE--EEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCC
Q 008503 199 ASNRII--GARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 243 (563)
Q Consensus 199 ~~g~v~--gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~ 243 (563)
+ +++. .+++.+ .++ ..+++|++||.|+|.+| .+++.+|...
T Consensus 151 ~-~~~~~v~v~~~~-~~~-~~~i~a~~vV~AdG~~S-~vR~~lgi~~ 193 (535)
T 3ihg_A 151 D-DAGAGVTARLAG-PDG-EYDLRAGYLVGADGNRS-LVRESLGIGR 193 (535)
T ss_dssp G-GGCSEEEEEEEE-TTE-EEEEEEEEEEECCCTTC-HHHHHTTCCE
T ss_pred C-CccccEEEEEEc-CCC-eEEEEeCEEEECCCCcc-hHHHHcCCCc
Confidence 3 2222 344444 222 46899999999999999 6778777653
No 29
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.56 E-value=8.6e-14 Score=152.07 Aligned_cols=163 Identities=17% Similarity=0.208 Sum_probs=108.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccch-hhHHH---------Hhhcc-----Cc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGV-RYLEK---------AVFNL-----DY 133 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~-~~~~~---------~~~~~-----~~ 133 (563)
..++||||||||++|+++|+.|+++|++|+||||.+..+|+|..+.+.+.... .+..+ .+.+. ..
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 45799999999999999999999999999999999877777766655443211 11110 00000 00
Q ss_pred ccHHH----------HHHHHHHhhhccc-------CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEE
Q 008503 134 GQLKL----------VFHALEERKQAKD-------RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIK 196 (563)
Q Consensus 134 ~~~~~----------~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~ 196 (563)
..... ..+.+.+.+.... ..+...+.+.++...+..+...|.+.+.+.|++|+++++|++|..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLK 283 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEE
Confidence 01111 1122222221110 001111223334456778899999999999999999999999998
Q ss_pred cCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChh
Q 008503 197 DEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 197 ~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~ 233 (563)
+++ ++|+||++.+ .+|+..+|+||.||+|||.|+.
T Consensus 284 ~~~-g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDK-GTVKGILVKG-MYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CTT-SCEEEEEEEE-TTTEEEEEECSEEEECCCCCTT
T ss_pred cCC-CeEEEEEEEe-CCCcEEEEECCeEEEeCCCccc
Confidence 754 6899998875 3565568999999999999985
No 30
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.55 E-value=7.1e-15 Score=157.66 Aligned_cols=57 Identities=12% Similarity=-0.036 Sum_probs=51.8
Q ss_pred CCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCCCHHHH
Q 008503 475 GYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKWDKSRR 535 (563)
Q Consensus 475 c~~v~~~ei~~ai~~e~~~~~~D~l~rRtr~g~g~~~~g~~~~~~v~~~la~~l~~~~~~~ 535 (563)
| +++.++|..|+++ +.+..+.|||+||+||| +|||++|.+.+.++|++++|.+.+++
T Consensus 417 ~-~v~~~~i~~a~~~--g~~~~~~~k~~t~~g~g-~cqg~~c~~~~~~~~~~~~~~~~~~~ 473 (493)
T 1y56_A 417 C-DVSLKKVDEVIRK--GITDLQIIKRLTHLAMG-FCQGRYCLFNGAVVVSQRTGKKLSEI 473 (493)
T ss_dssp S-SCBHHHHHHHHHT--TCCCHHHHHHHSCTTCS-TTTTTTTHHHHHHHHHHHHCCCGGGS
T ss_pred c-cCcHHHHHHHHHh--CCCCHHHHHHHhcCCCc-cCCCccCHHHHHHHHHHHHCcCHHHc
Confidence 9 6999999999986 67778889999999998 79999999999999999999887654
No 31
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.55 E-value=5.7e-14 Score=153.25 Aligned_cols=157 Identities=16% Similarity=0.202 Sum_probs=103.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+.++||+|||||++|+++|+.|+++|++|+|||+.++..... ..++...+...+... . +.+.+.+...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~--G~~l~p~~~~~l~~l----G------l~~~l~~~~~ 88 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV--GESLLPGTMSILNRL----G------LQEKIDAQNY 88 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC--CCBCCHHHHHHHHHT----T------CHHHHHHHCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce--eeeECHHHHHHHHHc----C------CcHHHHhcCC
Confidence 456999999999999999999999999999999986543322 122222333333221 0 1122222211
Q ss_pred c---------ccCCcceEE-----------EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEE
Q 008503 149 A---------KDRSLKGAV-----------VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARI 208 (563)
Q Consensus 149 ~---------~~~~~~~~~-----------~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~ 208 (563)
. ........+ .+....+++..+...|.+.+.+.|++++++++|+++..++ +.+++|.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~ 166 (591)
T 3i3l_A 89 VKKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTV 166 (591)
T ss_dssp EEECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEE
T ss_pred cccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEE
Confidence 1 000000000 1123357788899999999999999999999999998764 46677877
Q ss_pred EECCCCcEEEEEeCeEEEccCcChhhhhhhhcCC
Q 008503 209 RNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 242 (563)
Q Consensus 209 ~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~ 242 (563)
.+ +|...+++|+.||.|+|.+|. +++.++..
T Consensus 167 ~~--~G~~~~i~AdlVV~AdG~~S~-lr~~lg~~ 197 (591)
T 3i3l_A 167 RR--GGESVTVESDFVIDAGGSGGP-ISRKLGVR 197 (591)
T ss_dssp EE--TTEEEEEEESEEEECCGGGCH-HHHHHTCE
T ss_pred ec--CCceEEEEcCEEEECCCCcch-hHHHcCCC
Confidence 53 454468999999999999885 55555544
No 32
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.53 E-value=1.5e-13 Score=149.51 Aligned_cols=159 Identities=25% Similarity=0.279 Sum_probs=101.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
..++||+|||||++|+++|+.|+++|++|+||||.+... ..++..++...+.+.+++. . +++.+.+...
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~-~~~r~~~l~~~s~~~l~~l----G------l~~~l~~~~~ 115 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV-GHDRAGALHIRTVETLDLR----G------LLDRFLEGTQ 115 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC-CSSSCCCBCHHHHHHHHTT----T------CHHHHTTSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC-CCceEEEECHHHHHHHHHc----C------ChHHHHhcCc
Confidence 356999999999999999999999999999999986432 2334444443344433321 0 0111111111
Q ss_pred cccCC-cce------------EEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCc
Q 008503 149 AKDRS-LKG------------AVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGK 215 (563)
Q Consensus 149 ~~~~~-~~~------------~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~ 215 (563)
..... +.+ ...+....++...+...|.+.+.+.|++|+++++|+++..+++ .|. |.+.+ .+|.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~--~v~-v~~~~-~~G~ 191 (570)
T 3fmw_A 116 VAKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAE--AVE-VTVAG-PSGP 191 (570)
T ss_dssp BCSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSS--CEE-EEEEE-TTEE
T ss_pred ccCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--eEE-EEEEe-CCCc
Confidence 00000 000 0011223467788889999999889999999999999988763 443 55543 2332
Q ss_pred EEEEEeCeEEEccCcChhhhhhhhcCCCC
Q 008503 216 EFDTYAKVVVNAAGPFCDSVRKLADQNVQ 244 (563)
Q Consensus 216 ~~~i~A~~VI~AtG~~s~~l~~~~g~~~~ 244 (563)
.+++|++||.|+|.+| .+++.+|...+
T Consensus 192 -~~~~a~~vV~ADG~~S-~vR~~lGi~~~ 218 (570)
T 3fmw_A 192 -YPVRARYGVGCDGGRS-TVRRLAADRFP 218 (570)
T ss_dssp -EEEEESEEEECSCSSC-HHHHHTTCCCC
T ss_pred -EEEEeCEEEEcCCCCc-hHHHHcCCCCc
Confidence 5799999999999999 67788877644
No 33
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.51 E-value=3.6e-13 Score=144.54 Aligned_cols=159 Identities=19% Similarity=0.224 Sum_probs=101.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+.++||+|||||++|+++|+.|+++|++|+||||.+... ..++..++...+.+.+++... .+.+.+...
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~-~~~r~~~l~~~~~~~l~~lGl----------~~~~~~~~~ 78 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRT-GESRGLGFTARTMEVFDQRGI----------LPAFGPVET 78 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCC-CCCCSEEECHHHHHHHHHTTC----------GGGGCSCCE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC-CCCceeEECHHHHHHHHHCCC----------HHHHHhccc
Confidence 567999999999999999999999999999999985322 223333333333333332100 000000000
Q ss_pred cccCCcce-EEE--------ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEE
Q 008503 149 AKDRSLKG-AVV--------YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDT 219 (563)
Q Consensus 149 ~~~~~~~~-~~~--------~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i 219 (563)
.....+.+ .+. +....++...+...|.+.+.+.|++|+++++|+++..++ +.|+ |++.+ .+| ..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~-~~g-~~~~ 153 (499)
T 2qa2_A 79 STQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVV-VEVEG-PDG-PRSL 153 (499)
T ss_dssp ESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEE-EEEEC-SSC-EEEE
T ss_pred cccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEc-CCC-cEEE
Confidence 00000000 000 112345677888899999999999999999999999876 3453 55554 334 3579
Q ss_pred EeCeEEEccCcChhhhhhhhcCCCC
Q 008503 220 YAKVVVNAAGPFCDSVRKLADQNVQ 244 (563)
Q Consensus 220 ~A~~VI~AtG~~s~~l~~~~g~~~~ 244 (563)
+|++||.|+|.+|. +++.+|.+.+
T Consensus 154 ~a~~vVgADG~~S~-VR~~lg~~~~ 177 (499)
T 2qa2_A 154 TTRYVVGCDGGRST-VRKAAGFDFP 177 (499)
T ss_dssp EEEEEEECCCTTCH-HHHHTTCCCC
T ss_pred EeCEEEEccCcccH-HHHHcCCCCC
Confidence 99999999999986 6777776543
No 34
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.50 E-value=3.8e-12 Score=136.57 Aligned_cols=158 Identities=20% Similarity=0.226 Sum_probs=100.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+.++||+|||||++|+++|+.|+++|++|+||||.+... ..++..++...+.+.+++. ... +.+.+...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~-~~~r~~~l~~~~~~~l~~l----Gl~------~~~~~~~~ 77 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERT-GESRGLGFTARTMEVFDQR----GIL------PRFGEVET 77 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-C-CCCCSEEECHHHHHHHHTT----TCG------GGGCSCCB
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCC-CCCCcceECHHHHHHHHHC----CCH------HHHHhccc
Confidence 567999999999999999999999999999999985322 2233333333333333221 000 00000000
Q ss_pred cccCCcce-EEE--------ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEE
Q 008503 149 AKDRSLKG-AVV--------YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDT 219 (563)
Q Consensus 149 ~~~~~~~~-~~~--------~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i 219 (563)
.....+.+ .+. +....++...+...|.+.+.+.|++++++++|+++..++ +.|+ |++.+ .+| ..++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~-~~g-~~~~ 152 (500)
T 2qa1_A 78 STQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVT-VEVRG-PEG-KHTL 152 (500)
T ss_dssp CCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEE-EEEEE-TTE-EEEE
T ss_pred cccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEE-EEEEc-CCC-CEEE
Confidence 00000000 000 111335667888889999999999999999999999876 3453 65655 333 3579
Q ss_pred EeCeEEEccCcChhhhhhhhcCCC
Q 008503 220 YAKVVVNAAGPFCDSVRKLADQNV 243 (563)
Q Consensus 220 ~A~~VI~AtG~~s~~l~~~~g~~~ 243 (563)
+|++||.|+|.+|. +++.+|.+.
T Consensus 153 ~a~~vVgADG~~S~-VR~~lg~~~ 175 (500)
T 2qa1_A 153 RAAYLVGCDGGRSS-VRKAAGFDF 175 (500)
T ss_dssp EESEEEECCCTTCH-HHHHTTCCC
T ss_pred EeCEEEECCCcchH-HHHHcCCCc
Confidence 99999999999985 677777654
No 35
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.49 E-value=2.7e-13 Score=148.10 Aligned_cols=166 Identities=15% Similarity=0.144 Sum_probs=104.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCC-Cccccc----hh----hHHHHhhc---cC-ccc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRST-KLIHGG----VR----YLEKAVFN---LD-YGQ 135 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~-~~~~~g----~~----~~~~~~~~---~~-~~~ 135 (563)
+.++||||||||++|+++|+.|+++|++|+||||.....+.|..++ |+.... .. ++...+.. +. ...
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 4568999999999999999999999999999999976555554433 332111 01 11111110 10 000
Q ss_pred HH-------HHHHHHHHhhhcccCCcceEE--EecC-----------------ceechHHHHHHHHHHHHHCCCEEEcCc
Q 008503 136 LK-------LVFHALEERKQAKDRSLKGAV--VYYD-----------------GQMNDSRLNVGLALTAALAGAAVLNHA 189 (563)
Q Consensus 136 ~~-------~~~~~l~~~~~~~~~~~~~~~--~~~~-----------------~~~~~~~l~~~l~~~a~~~G~~i~~~~ 189 (563)
.. ...+.+.+.+........+.+ .... ....+..+...|.+.+.+.|++|++++
T Consensus 85 v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~ 164 (588)
T 2wdq_A 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEW 164 (588)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETE
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCc
Confidence 11 112233332221100000000 0000 111246788889999999999999999
Q ss_pred EEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhh
Q 008503 190 EVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 235 (563)
Q Consensus 190 ~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l 235 (563)
+|++|..+++ ++|+||.+.+..+|+...+.|+.||+|||.|+...
T Consensus 165 ~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y 209 (588)
T 2wdq_A 165 YALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAGRIY 209 (588)
T ss_dssp EEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred EEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcccc
Confidence 9999998633 78999998764566666899999999999998653
No 36
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.48 E-value=1.5e-12 Score=140.33 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=107.3
Q ss_pred CceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcC
Q 008503 162 DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 241 (563)
Q Consensus 162 ~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~ 241 (563)
...+++..+...|.+.+.+.|++++++ +|+++..+++ +.+++|.. .+|+ +++||.||+|+|.+|..+..++|.
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~---~~g~--~~~ad~vV~A~G~~S~~~~~~~g~ 239 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHT---KQHG--EISGDLFVDCTGFRGLLINQTLGG 239 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEE---SSSC--EEECSEEEECCGGGCCCCCCCTCC
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEE---CCCC--EEEcCEEEECCCcchHHHHHHhCC
Confidence 345788999999999999999999999 9999988654 56666755 3443 699999999999999765666654
Q ss_pred CCCC--eeecCCceE-EEecCCcCCCCcccccccCCCCcEEEEeecCCcEEeeecCCCCCCCCCCCCCHHHHH-HHHHHH
Q 008503 242 NVQP--MICPSSGVH-IVLPDYYSPEGMGLIVPKTKDGRVVFMLPWLGRTVAGTTDSDTVITLLPEPHEDEIQ-FILDAI 317 (563)
Q Consensus 242 ~~~~--~v~~~~G~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~P~~g~~~iG~t~~~~~~~~~~~~~~~~~~-~ll~~~ 317 (563)
.... ...+..... +.++....+............+..++++|..+...+|..... . ..+.++.. .+.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~g~~~~~-----~-~~~~~~~~~~l~~~~ 313 (511)
T 2weu_A 240 RFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFKRDGNGYVYSD-----E-FISPEEAERELRSTV 313 (511)
T ss_dssp CEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSSEEEEEEEECT-----T-TSCHHHHHHHHHHHH
T ss_pred CCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCCceEEEEEECC-----C-CCCHHHHHHHHHHHh
Confidence 3110 012222221 122211100001111110122346788898766666654321 1 12333333 333322
Q ss_pred hhhccCCCCCCCcccceeeeeecccCCCCCCCCCccccceEee-cCCCeEEEe-cChhhhhHHHHHHHHH
Q 008503 318 SDYLNVKVRRTDVLSAWSGIRPLAMDPSAKNTESISRDHVVCE-DFPGLVTIT-GGKWTTYRSMAEDAVN 385 (563)
Q Consensus 318 ~~~~~~~l~~~~v~~~~aG~rp~~~d~~~~~~~~~~~~~~i~~-~~~gl~~~~-Gg~~t~a~~~Ae~v~~ 385 (563)
... +.+....++..|.|.++.... +.++.. +..+.+.-. |-+++.+..-|..+++
T Consensus 314 -~~~-~~~~~~~~~~~~~~~~~~~~~-----------~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~ 370 (511)
T 2weu_A 314 -APG-RDDLEANHIQMRIGRNERTWI-----------NNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVK 370 (511)
T ss_dssp -CTT-CTTSCCEEEECCCEEESCSEE-----------TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHH
T ss_pred -Ccc-cccccceeEEeeccccccccC-----------CCEEEEechhhccCccccccHHHHHHHHHHHHH
Confidence 211 234444556677777654321 122222 223444433 3356666666655554
No 37
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.46 E-value=4.4e-13 Score=147.75 Aligned_cols=164 Identities=20% Similarity=0.234 Sum_probs=103.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCC-Cccccch-------hh----HHHHhhc---c-C
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRST-KLIHGGV-------RY----LEKAVFN---L-D 132 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~-~~~~~g~-------~~----~~~~~~~---~-~ 132 (563)
+.++||||||||++|+++|+.|++.|++|+||||.....|.|..++ |+..... .. +...+.. + +
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred cccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 4568999999999999999999999999999999976555554443 3322110 00 1111110 0 0
Q ss_pred cccHH-------HHHHHHHHhhhcccCCcceE---------------------E--EecCce----------echHHHHH
Q 008503 133 YGQLK-------LVFHALEERKQAKDRSLKGA---------------------V--VYYDGQ----------MNDSRLNV 172 (563)
Q Consensus 133 ~~~~~-------~~~~~l~~~~~~~~~~~~~~---------------------~--~~~~~~----------~~~~~l~~ 172 (563)
..... ...+.+.+.+........+. + ....+. .....+..
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~ 162 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLF 162 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHH
Confidence 00011 11223333322111000000 0 001111 12457888
Q ss_pred HHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhh
Q 008503 173 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 173 ~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
.|.+.+.+.|++|++++.|++|..++ ++|.||.+.+..+|+...|.|+.||+|||.|+..
T Consensus 163 ~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 163 AVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 89999989999999999999998864 7899998876556766679999999999999864
No 38
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.45 E-value=1.6e-12 Score=141.88 Aligned_cols=164 Identities=18% Similarity=0.242 Sum_probs=106.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccch-hh-------------HHHHhh-ccCc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGV-RY-------------LEKAVF-NLDY 133 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~-~~-------------~~~~~~-~~~~ 133 (563)
...+||+|||+|++|+++|+.|+++|++|+|||+.+..+|.+..+.+.+.... .+ ...... ....
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 35689999999999999999999999999999999877777766655442211 11 000000 0000
Q ss_pred ccHH----------HHHHHHHHhhhccc-------CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEE
Q 008503 134 GQLK----------LVFHALEERKQAKD-------RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIK 196 (563)
Q Consensus 134 ~~~~----------~~~~~l~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~ 196 (563)
.... ...+.+.+.+.... ..+...+.+.++......+...|.+.+.+.|++|+++++|++|..
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~ 283 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILE 283 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEE
Confidence 0111 11222333222110 000111122233345678888999999999999999999999987
Q ss_pred cCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhh
Q 008503 197 DEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 197 ~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
+++ ++|+||++.+ .+|+...|.||.||+|||.|+..
T Consensus 284 ~~~-g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 284 DAS-GKVTGVLVKG-EYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp C---CCEEEEEEEE-TTTEEEEEECSEEEECCCCCTTC
T ss_pred CCC-CeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCccC
Confidence 653 5899998875 45655679999999999999853
No 39
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.44 E-value=2.8e-12 Score=140.16 Aligned_cols=147 Identities=18% Similarity=0.191 Sum_probs=95.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHC------CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHH
Q 008503 70 NPLDILVIGGGATGCGVALDAATR------GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHAL 143 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~------G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 143 (563)
.+|||+|||||++|+++|+.|++. |++|+||||++..++... +.+.+.+ +.++..+ .. +
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~-~g~~l~~--~~l~~ll-----~~-------~ 98 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL-SGACLDP--RAFEELF-----PD-------W 98 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCC-CCCEECT--HHHHHHC-----TT-------H
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccc-cccccCH--HHHHHHH-----HH-------H
Confidence 459999999999999999999999 999999999864332211 1222221 1111110 00 1
Q ss_pred HHhhhc------------ccCCcceEEE-----------ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCC
Q 008503 144 EERKQA------------KDRSLKGAVV-----------YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEAS 200 (563)
Q Consensus 144 ~~~~~~------------~~~~~~~~~~-----------~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~ 200 (563)
.+.+.. .... ..+. .....++...+...|.+.+++.|++|+++++|+++..+++
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~- 175 (584)
T 2gmh_A 99 KEKGAPLNTPVTEDRFGILTEK--YRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED- 175 (584)
T ss_dssp HHHTCCCCEECCEEEEEEECSS--CEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTT-
T ss_pred HhcCCceeeeechhheeeeccC--CCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-
Confidence 111100 0000 0010 0022355678888999999999999999999999998765
Q ss_pred CcEEEEEEEEC---CCCcE-------EEEEeCeEEEccCcChhh
Q 008503 201 NRIIGARIRNN---LSGKE-------FDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 201 g~v~gv~~~d~---~~g~~-------~~i~A~~VI~AtG~~s~~ 234 (563)
++|++|.+.+. .+|+. .+++||+||+|+|.+|..
T Consensus 176 g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 176 GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHH
T ss_pred CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchH
Confidence 67888876420 13321 479999999999999863
No 40
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.44 E-value=2e-12 Score=136.90 Aligned_cols=165 Identities=16% Similarity=0.122 Sum_probs=98.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCcc-c-cchhhHHHHhhccCc--c---------c
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLI-H-GGVRYLEKAVFNLDY--G---------Q 135 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~-~-~g~~~~~~~~~~~~~--~---------~ 135 (563)
+.++||+|||||++|+++|+.|+++|++|+||||.+..++.+..+.+.. + ............+.. . .
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 5569999999999999999999999999999999864333211111100 0 000001111111100 0 0
Q ss_pred HHHHHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCc
Q 008503 136 LKLVFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGK 215 (563)
Q Consensus 136 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~ 215 (563)
.....+.+.+.+........+.+.+... ....+...|.+.+.+.|++++++++|+++..++ +++++|.+ .+|.
T Consensus 104 ~~~~~~~~~~~G~~~~~~~~g~~~p~~~--~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~---~~G~ 176 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKEEDHGRMFPVSN--KAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVIL---QTGE 176 (447)
T ss_dssp HHHHHHHHHHTTCCEEECGGGEEEETTC--CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEE---TTCC
T ss_pred HHHHHHHHHhcCCceEEeeCCEEECCCC--CHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEE---CCCC
Confidence 0111222222221100000111111111 246788889999999999999999999998765 57777765 3443
Q ss_pred EEEEEeCeEEEccCcCh----------hhhhhhhcCC
Q 008503 216 EFDTYAKVVVNAAGPFC----------DSVRKLADQN 242 (563)
Q Consensus 216 ~~~i~A~~VI~AtG~~s----------~~l~~~~g~~ 242 (563)
+++|+.||+|+|.++ ..++...|..
T Consensus 177 --~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 177 --VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp --EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred --EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 699999999999999 4556666654
No 41
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.44 E-value=1.5e-12 Score=142.58 Aligned_cols=163 Identities=15% Similarity=0.115 Sum_probs=103.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccch-----hhHHHH----hhccC-cccHH--
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGV-----RYLEKA----VFNLD-YGQLK-- 137 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~-----~~~~~~----~~~~~-~~~~~-- 137 (563)
.++||||||||++|+++|+.|++.|++|+||||.....+.|..+.|-+.... ..+... +..-. ..+..
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4589999999999999999999999999999998765555544433222110 111111 10000 00111
Q ss_pred --------HHHHHHHHhhhccc---C-Ccc----eEEEe------------cCceechHHHHHHHHHHHHHCCCEEEcCc
Q 008503 138 --------LVFHALEERKQAKD---R-SLK----GAVVY------------YDGQMNDSRLNVGLALTAALAGAAVLNHA 189 (563)
Q Consensus 138 --------~~~~~l~~~~~~~~---~-~~~----~~~~~------------~~~~~~~~~l~~~l~~~a~~~G~~i~~~~ 189 (563)
...+.+.+.+.... . .+. ++... +.+......+...|.+.+.+.|++|++++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~ 176 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY 176 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEce
Confidence 11223333322110 0 000 00000 00011245788889998888999999999
Q ss_pred EEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhh
Q 008503 190 EVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 190 ~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
.|++|..++ ++|.||.+.+..+|+...|.|+.||+|||.|+..
T Consensus 177 ~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 177 FALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 999999864 7899999877556766789999999999999864
No 42
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.43 E-value=3.5e-12 Score=133.23 Aligned_cols=153 Identities=12% Similarity=0.090 Sum_probs=94.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
...+||+|||||++|+++|+.|+++|++|+||||.+... ..++...+.+.+.+.+++. . +.+.+.+...
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~-~~~~~~~l~~~~~~~l~~l----g------~~~~~~~~~~ 89 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK-PVGAAISVWPNGVKCMAHL----G------MGDIMETFGG 89 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-----CEEEECHHHHHHHHHT----T------CHHHHHHHSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC-CcCeeEEECHHHHHHHHHC----C------CHHHHHhhcC
Confidence 457999999999999999999999999999999986322 1222222223333333321 0 1122222221
Q ss_pred c-------cc--CCcceEEE---------ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEE
Q 008503 149 A-------KD--RSLKGAVV---------YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRN 210 (563)
Q Consensus 149 ~-------~~--~~~~~~~~---------~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d 210 (563)
. .. ......+. .....++...+...|.+.+.+ ++++++++|+++..+++ .+ .|.+
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~--~v-~v~~-- 162 (407)
T 3rp8_A 90 PLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD--GV-TVWF-- 162 (407)
T ss_dssp CCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT--EE-EEEE--
T ss_pred CCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC--cE-EEEE--
Confidence 1 00 01101111 123346777888888888766 89999999999998763 33 2333
Q ss_pred CCCCcEEEEEeCeEEEccCcChhhhhhhhcCC
Q 008503 211 NLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 242 (563)
Q Consensus 211 ~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~ 242 (563)
.+|+ +++||.||.|+|.+|.....+.+..
T Consensus 163 -~~g~--~~~a~~vV~AdG~~S~vr~~l~~~~ 191 (407)
T 3rp8_A 163 -TDGS--SASGDLLIAADGSHSALRPWVLGFT 191 (407)
T ss_dssp -TTSC--EEEESEEEECCCTTCSSHHHHHSSC
T ss_pred -cCCC--EEeeCEEEECCCcChHHHHHhcCCC
Confidence 3443 7999999999999986544443654
No 43
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.42 E-value=3.3e-13 Score=146.05 Aligned_cols=164 Identities=20% Similarity=0.224 Sum_probs=91.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchh-------hHHHHhh---ccC-cccHH
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVR-------YLEKAVF---NLD-YGQLK 137 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~-------~~~~~~~---~~~-~~~~~ 137 (563)
+.++||||||||++|+++|+.|++ |++|+||||.+...++|..+.|.+..... ++...+. .+. .....
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 456999999999999999999999 99999999998777777666554432110 0111110 000 00011
Q ss_pred -------HHHHHHHHhhhcccCCc----ceEE--Ee----------cCceechHHHHHHHHHHHHH-CCCEEEcCcEEEE
Q 008503 138 -------LVFHALEERKQAKDRSL----KGAV--VY----------YDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVIS 193 (563)
Q Consensus 138 -------~~~~~l~~~~~~~~~~~----~~~~--~~----------~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~ 193 (563)
...+.+.+.+....... .+.+ .. ..+......+...|.+.+.+ .|++|++++.|++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 11222332222110000 0000 00 00111234566677788888 7999999999999
Q ss_pred EEEcCCCC------cEEEEEEEECCCCcEEEEEeCeEEEccCcChhh
Q 008503 194 LIKDEASN------RIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 194 l~~~~~~g------~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
|..+++ + +|+||.+.+..+|+...+.|+.||+|||.++..
T Consensus 165 L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 165 LIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp EEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred EEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 998433 4 899999876446666689999999999999864
No 44
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.40 E-value=2.6e-12 Score=134.40 Aligned_cols=149 Identities=16% Similarity=0.154 Sum_probs=89.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCc----cc----------cchhhHHHHhhccCcc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKL----IH----------GGVRYLEKAVFNLDYG 134 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~----~~----------~g~~~~~~~~~~~~~~ 134 (563)
+.++||+|||||++|+++|+.|+++|++|+|||+.+..++....+.+. .+ ....++...+..+.
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~-- 102 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYR-- 102 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSC--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcC--
Confidence 457999999999999999999999999999999997443321111000 00 00011111111111
Q ss_pred cHHHHHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCC
Q 008503 135 QLKLVFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSG 214 (563)
Q Consensus 135 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g 214 (563)
.....+.+.+.+........+...+ ......+...|.+.+.+.|++++++++|+++..+++ . +.|.. .+
T Consensus 103 -~~~~~~~~~~~Gi~~~~~~~g~~~~---~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~--~-~~V~~---~~- 171 (417)
T 3v76_A 103 -PQDFVALVERHGIGWHEKTLGQLFC---DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS--G-FRVTT---SA- 171 (417)
T ss_dssp -HHHHHHHHHHTTCCEEECSTTEEEE---SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--E-EEEEE---TT-
T ss_pred -HHHHHHHHHHcCCCcEEeeCCEEee---CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--E-EEEEE---CC-
Confidence 1122233333322111111111111 234567888899999999999999999999988753 2 33432 22
Q ss_pred cEEEEEeCeEEEccCcCh
Q 008503 215 KEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 215 ~~~~i~A~~VI~AtG~~s 232 (563)
.+++||.||+|+|.++
T Consensus 172 --g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 172 --GTVDAASLVVASGGKS 187 (417)
T ss_dssp --EEEEESEEEECCCCSS
T ss_pred --cEEEeeEEEECCCCcc
Confidence 2799999999999998
No 45
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.40 E-value=1.1e-11 Score=134.29 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=58.8
Q ss_pred CceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcC
Q 008503 162 DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 241 (563)
Q Consensus 162 ~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~ 241 (563)
...+++..+...|.+.+.+.|++++++ +|+++..+++ +.+++|.. .+|. +++||.||+|+|.+|..+..+++.
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~---~~g~--~i~ad~vV~A~G~~s~~~~~~lg~ 231 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLT---KEGR--TLEADLFIDCSGMRGLLINQALKE 231 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEE---TTSC--EECCSEEEECCGGGCCCCCCCTCC
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEE---CCCc--EEEeCEEEECCCCchhhHHHHhCC
Confidence 456888999999999999999999999 8999988654 56666654 3443 699999999999999765666554
Q ss_pred C
Q 008503 242 N 242 (563)
Q Consensus 242 ~ 242 (563)
.
T Consensus 232 ~ 232 (538)
T 2aqj_A 232 P 232 (538)
T ss_dssp C
T ss_pred C
Confidence 3
No 46
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.39 E-value=4.6e-12 Score=125.74 Aligned_cols=144 Identities=18% Similarity=0.181 Sum_probs=92.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC-CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR-GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~-G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
..++||+|||||++|+++|+.|+++ |++|+|||+.+..++.+..+.+++..-.- . ... .+.+.+.+
T Consensus 37 ~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~-------~--~~~----~~~l~~~G 103 (284)
T 1rp0_A 37 YAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIV-------R--KPA----HLFLDEIG 103 (284)
T ss_dssp HTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEE-------E--TTT----HHHHHHHT
T ss_pred ccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHc-------C--cHH----HHHHHHcC
Confidence 3568999999999999999999997 99999999986544444333333221000 0 000 11122212
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEEC---------CCCcEE
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNN---------LSGKEF 217 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~---------~~g~~~ 217 (563)
...... +.+.. ..+...+...+.+.+.+ .|++++++++|+++..++ +++.+|.+.+. .+++..
T Consensus 104 ~~~~~~--~~~~~---~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~ 176 (284)
T 1rp0_A 104 VAYDEQ--DTYVV---VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPN 176 (284)
T ss_dssp CCCEEC--SSEEE---ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCE
T ss_pred CCcccC--CCEEE---ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceE
Confidence 110000 01100 11456677788888876 699999999999998875 57888887531 113336
Q ss_pred EEEeCeEEEccCcCh
Q 008503 218 DTYAKVVVNAAGPFC 232 (563)
Q Consensus 218 ~i~A~~VI~AtG~~s 232 (563)
.+.||.||+|+|..+
T Consensus 177 ~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 177 VMEAKIVVSSCGHDG 191 (284)
T ss_dssp EEEEEEEEECCCSSS
T ss_pred EEECCEEEECCCCch
Confidence 799999999999654
No 47
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.39 E-value=2.4e-12 Score=140.97 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=101.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC--CcEEEEeccCCCCCCccC-CCCcccc-----chhh-HHHHhhccC-cccHHH
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRG--LRVGLVEREDFSSGTSSR-STKLIHG-----GVRY-LEKAVFNLD-YGQLKL 138 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~~~~~g~s~~-~~~~~~~-----g~~~-~~~~~~~~~-~~~~~~ 138 (563)
+.++||||||||++|+++|+.|++.| ++|+||||.....+.|.. +.|+... .... +...+..-. ..+...
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 45689999999999999999999999 999999998654443332 2332211 0000 011110000 001111
Q ss_pred ----------HHHHHHHhhhcccCCcceEE--EecCc----------eechHHHHHHHHHHHHHCC-CEEEcCcEEEEEE
Q 008503 139 ----------VFHALEERKQAKDRSLKGAV--VYYDG----------QMNDSRLNVGLALTAALAG-AAVLNHAEVISLI 195 (563)
Q Consensus 139 ----------~~~~l~~~~~~~~~~~~~~~--~~~~~----------~~~~~~l~~~l~~~a~~~G-~~i~~~~~v~~l~ 195 (563)
..+.+.+.+......-.+.+ ....+ ......+...|.+.+.+.| +++++++.|++|.
T Consensus 83 v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 83 VDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEE
Confidence 12223222221100000000 00001 1124577888888888888 9999999999999
Q ss_pred EcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhh
Q 008503 196 KDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 235 (563)
Q Consensus 196 ~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l 235 (563)
.++ ++|+||.+.+..+|+...+.|+.||+|||.|+...
T Consensus 163 ~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 163 VDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp EET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGS
T ss_pred EeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccc
Confidence 875 68999988764566656899999999999998753
No 48
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.37 E-value=4.2e-12 Score=132.29 Aligned_cols=156 Identities=22% Similarity=0.218 Sum_probs=97.9
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 68 ~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.+.++||+|||||++|+++|+.|+++|++|+|||+.+.. ...+....+...+.+.+.+. . +.+.+.+..
T Consensus 3 ~~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~-~~~~~~~~l~~~~~~~l~~~----g------~~~~~~~~~ 71 (399)
T 2x3n_A 3 TDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE-RAINGADLLKPAGIRVVEAA----G------LLAEVTRRG 71 (399)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC----CCCCEECHHHHHHHHHT----T------CHHHHHHTT
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC-CccCceeeECchHHHHHHHc----C------cHHHHHHhC
Confidence 345689999999999999999999999999999998532 12222222222233333221 0 011121111
Q ss_pred hc-------ccCCc-ceEEEe-------cCceechHHHHHHHHHHHHHC-CCEEEcCcEEEEEEEcCCCCcEE-EEEEEE
Q 008503 148 QA-------KDRSL-KGAVVY-------YDGQMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRII-GARIRN 210 (563)
Q Consensus 148 ~~-------~~~~~-~~~~~~-------~~~~~~~~~l~~~l~~~a~~~-G~~i~~~~~v~~l~~~~~~g~v~-gv~~~d 210 (563)
.. ..... ...+.. ....+++..+...|.+.+.+. |++++++++|+++..++ +.++ .|.+
T Consensus 72 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~-- 147 (399)
T 2x3n_A 72 GRVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRL-- 147 (399)
T ss_dssp CEEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEE--
T ss_pred CCcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEE--
Confidence 11 00000 000110 113467788999999999887 99999999999998875 3443 3433
Q ss_pred CCCCcEEEEEeCeEEEccCcChhhhhhhhcCC
Q 008503 211 NLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 242 (563)
Q Consensus 211 ~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~ 242 (563)
.+|+ +++||.||.|+|.+|. +++.++..
T Consensus 148 -~~g~--~~~ad~vV~AdG~~s~-vr~~lg~~ 175 (399)
T 2x3n_A 148 -NDGR--VLRPRVVVGADGIASY-VRRRLLDI 175 (399)
T ss_dssp -TTSC--EEEEEEEEECCCTTCH-HHHHTSCC
T ss_pred -CCCC--EEECCEEEECCCCChH-HHHHhCCC
Confidence 3453 7899999999999997 66666655
No 49
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.36 E-value=3.7e-11 Score=130.54 Aligned_cols=73 Identities=16% Similarity=0.092 Sum_probs=58.2
Q ss_pred ceechHHHHHHHHHHHHHC-CCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcC
Q 008503 163 GQMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 241 (563)
Q Consensus 163 ~~~~~~~l~~~l~~~a~~~-G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~ 241 (563)
..+++..+...|.+.+.+. |++++++ +|+++..+++ +.+++|.+ .+| .++.||.||+|+|.+|..+.+.++.
T Consensus 189 ~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~---~~G--~~i~ad~vI~A~G~~S~~~~~~lg~ 261 (550)
T 2e4g_A 189 WHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRT---ATG--RVFDADLFVDCSGFRGLLINKAMEE 261 (550)
T ss_dssp EEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEE---TTS--CEEECSEEEECCGGGCCCCCCCTCC
T ss_pred eEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEE---CCC--CEEECCEEEECCCCchhhHHHHhCC
Confidence 3478889999999999988 9999999 9999988654 56667755 344 3699999999999999765666654
Q ss_pred C
Q 008503 242 N 242 (563)
Q Consensus 242 ~ 242 (563)
.
T Consensus 262 ~ 262 (550)
T 2e4g_A 262 P 262 (550)
T ss_dssp C
T ss_pred C
Confidence 3
No 50
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.33 E-value=3.4e-12 Score=140.63 Aligned_cols=165 Identities=21% Similarity=0.250 Sum_probs=102.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC------CCcEEEEeccCCCCCCccCCCC--ccccch------hhHHHHhh-ccCc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR------GLRVGLVEREDFSSGTSSRSTK--LIHGGV------RYLEKAVF-NLDY 133 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~------G~~V~llEk~~~~~g~s~~~~~--~~~~g~------~~~~~~~~-~~~~ 133 (563)
+.++||||||||++|+++|++|++. |++|+||||..+..+++. +.| -+.... .+...... ....
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~-AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl 98 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAV-AQGLSAINTYLGDNNADDYVRMVRTDLMGL 98 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTT-TTCEEEECCCCTTSCHHHHHHHHHHHTTTC
T ss_pred eEEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCccc-ccCcchheeecCCCCHHHHHHHHHHhcCCC
Confidence 3469999999999999999999998 999999999976554443 233 111110 11111000 0011
Q ss_pred ccHHH----------HHHHHHHhhhccc----CCc---------------ceEEEec----CceechHHHHHHHHHHHHH
Q 008503 134 GQLKL----------VFHALEERKQAKD----RSL---------------KGAVVYY----DGQMNDSRLNVGLALTAAL 180 (563)
Q Consensus 134 ~~~~~----------~~~~l~~~~~~~~----~~~---------------~~~~~~~----~~~~~~~~l~~~l~~~a~~ 180 (563)
.+... ..+.+.+.+.... .+. .++.... ...+....+...|.+.+.+
T Consensus 99 ~d~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~ 178 (662)
T 3gyx_A 99 VREDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKN 178 (662)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHh
Confidence 11111 1222333222110 000 0000000 1123455677788888888
Q ss_pred C--CCEEEcCcEEEEEEEcCC-CCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhh
Q 008503 181 A--GAAVLNHAEVISLIKDEA-SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 181 ~--G~~i~~~~~v~~l~~~~~-~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
. |++++.++.|++|..+++ .++|.||.+.+..+++...|.|+.||+|||.++..
T Consensus 179 ~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 179 ALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp HHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 7 999999999999988752 13999998887567777789999999999998853
No 51
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.33 E-value=2.5e-11 Score=134.16 Aligned_cols=161 Identities=15% Similarity=0.196 Sum_probs=102.3
Q ss_pred CCccEEEECCchHHHHHHHHHHH-CCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 70 NPLDILVIGGGATGCGVALDAAT-RGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~-~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
.++||+|||||++|+++|+.|++ +|++|+||||.+.. ...++..++...+.+.+++. . +.+.+.+...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~-~~~g~a~~l~~~t~e~l~~l----G------l~~~~~~~~~ 99 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP-MELGQADGIACRTMEMFEAF----E------FADSILKEAC 99 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC-CSSCSCCEECHHHHHHHHHT----T------CHHHHHHHSE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC-CCCCceeeeCHHHHHHHHHc----C------cHHHHHHhcc
Confidence 46899999999999999999999 99999999998532 22333333333333333321 0 0111111111
Q ss_pred c-------cc-----CCcce--EEE--------ecCceechHHHHHHHHHHHHHCCC--EEEcCcEEEEEEEcCC-CCcE
Q 008503 149 A-------KD-----RSLKG--AVV--------YYDGQMNDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEA-SNRI 203 (563)
Q Consensus 149 ~-------~~-----~~~~~--~~~--------~~~~~~~~~~l~~~l~~~a~~~G~--~i~~~~~v~~l~~~~~-~g~v 203 (563)
. .. ..+.. .+. +....++...+...|.+.+.+.|+ +++++++|+++..+++ ++..
T Consensus 100 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~ 179 (639)
T 2dkh_A 100 WINDVTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYP 179 (639)
T ss_dssp EECEEEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCC
T ss_pred cccceEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCC
Confidence 1 00 00000 000 011235667888899999999987 9999999999998752 1222
Q ss_pred EEEEEEEC---CCCcEEEEEeCeEEEccCcChhhhhhhhcCC
Q 008503 204 IGARIRNN---LSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 242 (563)
Q Consensus 204 ~gv~~~d~---~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~ 242 (563)
+.|++.+. .+|...+++||+||.|+|.+|. +++.+|..
T Consensus 180 v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~lg~~ 220 (639)
T 2dkh_A 180 VTVTLERCDAAHAGQIETVQARYVVGCDGARSN-VRRAIGRQ 220 (639)
T ss_dssp EEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH-HHHHTTCC
T ss_pred EEEEEEeccccCCCCeEEEEeCEEEECCCcchH-HHHHhCCC
Confidence 34666541 2455568999999999999996 67777765
No 52
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.33 E-value=1.5e-11 Score=135.77 Aligned_cols=165 Identities=26% Similarity=0.296 Sum_probs=99.5
Q ss_pred CCCccEEEECCchHHHHHHHHHH---H-CCCcEEEEeccCCCCCCccCCCCccccc--h---------hhHHHH----h-
Q 008503 69 SNPLDILVIGGGATGCGVALDAA---T-RGLRVGLVEREDFSSGTSSRSTKLIHGG--V---------RYLEKA----V- 128 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la---~-~G~~V~llEk~~~~~g~s~~~~~~~~~g--~---------~~~~~~----~- 128 (563)
+.++||||||||++|+++|+.|+ + .|++|+||||.....+ +..+.|..... + ...+.. .
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s-~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~ 98 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERS-GAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTL 98 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTC-STTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCC-cceecccccccchhhHHHhcCCCCCHHHHHHHHHH
Confidence 34689999999999999999999 6 8999999999975332 22222321111 0 001110 0
Q ss_pred --hccCccc-H-------HHHHHHHHHhhhcccCCcceEEEecC---ceechHHHHHHHHHHHHHC-CC-EEEcCcEEEE
Q 008503 129 --FNLDYGQ-L-------KLVFHALEERKQAKDRSLKGAVVYYD---GQMNDSRLNVGLALTAALA-GA-AVLNHAEVIS 193 (563)
Q Consensus 129 --~~~~~~~-~-------~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~a~~~-G~-~i~~~~~v~~ 193 (563)
..+...+ . ....+.+.+.+........+.+.+.. ..+++..+...|.+.+.+. |+ +|++++.|++
T Consensus 99 ~g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~ 178 (643)
T 1jnr_A 99 DMMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFE 178 (643)
T ss_dssp HTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEE
T ss_pred HhcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEE
Confidence 0111010 0 01122233322211100001111111 1234556677777778777 99 9999999999
Q ss_pred EEEcCC-CCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhh
Q 008503 194 LIKDEA-SNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 194 l~~~~~-~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
|..+++ .++|+||.+.+..+++...|.|+.||+|||.++..
T Consensus 179 L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 179 LLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred EEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 998651 02899998876556766689999999999999864
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.31 E-value=1.1e-11 Score=133.44 Aligned_cols=157 Identities=17% Similarity=0.119 Sum_probs=95.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCc-------------c-CCCCccccchhhHH-H-HhhccC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTS-------------S-RSTKLIHGGVRYLE-K-AVFNLD 132 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s-------------~-~~~~~~~~g~~~~~-~-~~~~~~ 132 (563)
..++||+|||||++|+++|+.|++.|++|+|||+++...+.. . .+..+-.+|...+. . ....+.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 346899999999999999999999999999999985220000 0 00000000100000 0 000000
Q ss_pred c--ccHHHHHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEE
Q 008503 133 Y--GQLKLVFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRN 210 (563)
Q Consensus 133 ~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d 210 (563)
. .....+.+.+.+.+.. ........+..+......+...|.+.+++.|++++++++|+++..++ +++++|.+
T Consensus 185 ~~~~~~~~v~~~~~~~G~~--~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l-- 258 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAP--EEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTL-- 258 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCC--GGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEE--
T ss_pred cccccHHHHHHHHHHcCCC--ceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEE--
Confidence 0 0112223333332221 00000011333445567788889999999999999999999998875 57888876
Q ss_pred CCCCcEEEEEeCeEEEccCcChhh
Q 008503 211 NLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 211 ~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
.+++ ++.|+.||+|+|.++..
T Consensus 259 -~~G~--~i~Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 259 -SNGE--EIKSRHVVLAVGHSARD 279 (549)
T ss_dssp -TTSC--EEECSCEEECCCTTCHH
T ss_pred -CCCC--EEECCEEEECCCCChhh
Confidence 3443 69999999999999863
No 54
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.30 E-value=4.4e-11 Score=129.23 Aligned_cols=73 Identities=10% Similarity=0.115 Sum_probs=56.8
Q ss_pred ceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcC
Q 008503 163 GQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQ 241 (563)
Q Consensus 163 ~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~ 241 (563)
..+++..+...|.+.+.+ .|++++++ +|+++..+++ +.+++|.. .+|. +++||.||.|+|.+|..+.+.+|.
T Consensus 170 ~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~---~~g~--~i~ad~vV~AdG~~S~~~~~~lg~ 242 (526)
T 2pyx_A 170 YHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLIT---KQNG--EISGQLFIDCTGAKSLLLGEHLQV 242 (526)
T ss_dssp EEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEE---SSSC--EEECSEEEECSGGGCCCCCCCTCC
T ss_pred EEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEE---CCCC--EEEcCEEEECCCcchHHHHHHhCC
Confidence 457888899999999998 89999999 5999988654 55656654 3443 599999999999998765666664
Q ss_pred C
Q 008503 242 N 242 (563)
Q Consensus 242 ~ 242 (563)
.
T Consensus 243 ~ 243 (526)
T 2pyx_A 243 P 243 (526)
T ss_dssp C
T ss_pred C
Confidence 3
No 55
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.28 E-value=3.5e-11 Score=121.13 Aligned_cols=147 Identities=19% Similarity=0.194 Sum_probs=92.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
..+|||+|||||++|+++|+.|+++ |++|+|||+.+..+|....+......-. .. ... .+.+.+.
T Consensus 77 ~~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~-------~~--~~~----~~~L~~~ 143 (344)
T 3jsk_A 77 HAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMV-------MR--KPA----DVFLDEV 143 (344)
T ss_dssp HHBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEE-------EE--TTT----HHHHHHH
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhh-------cc--hHH----HHHHHHc
Confidence 3569999999999999999999997 9999999998644433222111111000 00 001 1222222
Q ss_pred hhcccCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCC-----------------CCcEEEEEE
Q 008503 147 KQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEA-----------------SNRIIGARI 208 (563)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~-----------------~g~v~gv~~ 208 (563)
+...... +.+... .+...+...|.+.+.+ .|+++++++.|+++..+++ ..+|.||.+
T Consensus 144 Gv~~~~~--G~~~~~---~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~ 218 (344)
T 3jsk_A 144 GVPYEDE--GDYVVV---KHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVT 218 (344)
T ss_dssp TCCCEEC--SSEEEE---SCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEE
T ss_pred CCccccc--CCeEEE---ecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEe
Confidence 2211000 111111 1345677888888887 5999999999999987641 127889887
Q ss_pred EEC---CCC------cEEEEEeCeEEEccCcChh
Q 008503 209 RNN---LSG------KEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 209 ~d~---~~g------~~~~i~A~~VI~AtG~~s~ 233 (563)
... ..+ ...+|+|++||+|||..+.
T Consensus 219 ~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 219 NWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp EEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred eeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 531 111 3368999999999999875
No 56
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.27 E-value=5.7e-11 Score=128.98 Aligned_cols=157 Identities=20% Similarity=0.202 Sum_probs=97.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+.++||+|||||++|+++|+.|+++|++|+||||.+.. +..++..++...+.+.+++. . +.+.+.+.+.
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~-~~~~~~~~l~~~~~~~l~~l----G------l~~~~~~~~~ 92 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT-ITHPRVGTIGPRSMELFRRW----G------VAKQIRTAGW 92 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC-CSSCCCCEECHHHHHHHHHT----T------CHHHHHTSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-CCCCceeeeCHHHHHHHHHc----C------ChHHHHhhcC
Confidence 34689999999999999999999999999999998532 22233333333333333321 0 0111111111
Q ss_pred cc--------cCCcce----EEE-------------ec-CceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCc
Q 008503 149 AK--------DRSLKG----AVV-------------YY-DGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNR 202 (563)
Q Consensus 149 ~~--------~~~~~~----~~~-------------~~-~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~ 202 (563)
.. .....+ .+. +. ...++...+...|.+.+.+. ++++++|+++..++ +.
T Consensus 93 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~ 167 (549)
T 2r0c_A 93 PGDHPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRD--DH 167 (549)
T ss_dssp CTTSBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECS--SC
T ss_pred CcccccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeC--CE
Confidence 00 000000 000 01 12244556777788877766 99999999999876 35
Q ss_pred EEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhcCCC
Q 008503 203 IIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLADQNV 243 (563)
Q Consensus 203 v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~~ 243 (563)
|+ |++.+..+|+..+++||+||.|+|.+|. +++.+|...
T Consensus 168 v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~-vR~~lg~~~ 206 (549)
T 2r0c_A 168 VR-ATITDLRTGATRAVHARYLVACDGASSP-TRKALGIDA 206 (549)
T ss_dssp EE-EEEEETTTCCEEEEEEEEEEECCCTTCH-HHHHHTCCC
T ss_pred EE-EEEEECCCCCEEEEEeCEEEECCCCCcH-HHHHcCCCC
Confidence 54 5565533465568999999999999996 677777653
No 57
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.27 E-value=7.4e-11 Score=123.32 Aligned_cols=154 Identities=23% Similarity=0.195 Sum_probs=93.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCc-EEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLR-VGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~-V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
++||+|||||++|+++|+.|+++|++ |+||||.+.... .+....+...+.+.+.+. . +.+.+.+....
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~-~g~g~~l~~~~~~~l~~l----g------~~~~l~~~~~~ 72 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP-LGVGINIQPAAVEALAEL----G------LGPALAATAIP 72 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC-CSCEEEECHHHHHHHHHT----T------CHHHHHHHSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc-ceeEEEEChHHHHHHHHC----C------ChHHHHhhCCC
Confidence 58999999999999999999999999 999999863221 111111122222333221 1 11222222111
Q ss_pred ------ccCCcceEEE----------ecCceechHHHHHHHHHHHHH-CC-CEEEcCcEEEEEEEcCCCCcEEEEEEEEC
Q 008503 150 ------KDRSLKGAVV----------YYDGQMNDSRLNVGLALTAAL-AG-AAVLNHAEVISLIKDEASNRIIGARIRNN 211 (563)
Q Consensus 150 ------~~~~~~~~~~----------~~~~~~~~~~l~~~l~~~a~~-~G-~~i~~~~~v~~l~~~~~~g~v~gv~~~d~ 211 (563)
....-...+. .....++...+...|.+.+.+ .| ++++++++|+++.. + +.+. |.+.+.
T Consensus 73 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~v~-v~~~~~ 148 (410)
T 3c96_A 73 THELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DGRV-LIGARD 148 (410)
T ss_dssp ECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TTEE-EEEEEE
T ss_pred cceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--CccE-EEEecC
Confidence 0000000000 011245667888888888876 36 58999999999988 4 3443 555432
Q ss_pred CCCcEEEEEeCeEEEccCcChhhhhhhhc
Q 008503 212 LSGKEFDTYAKVVVNAAGPFCDSVRKLAD 240 (563)
Q Consensus 212 ~~g~~~~i~A~~VI~AtG~~s~~l~~~~g 240 (563)
.+|+..+++||+||.|+|.+|. +++.++
T Consensus 149 ~~g~~~~~~ad~vV~AdG~~S~-vR~~l~ 176 (410)
T 3c96_A 149 GHGKPQALGADVLVGADGIHSA-VRAHLH 176 (410)
T ss_dssp TTSCEEEEEESEEEECCCTTCH-HHHHHC
T ss_pred CCCCceEEecCEEEECCCccch-hHHHhc
Confidence 2354457999999999999986 455444
No 58
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.26 E-value=9.5e-11 Score=129.83 Aligned_cols=162 Identities=14% Similarity=0.158 Sum_probs=102.1
Q ss_pred CCCccEEEECCchHHHHHHHHHHH-----CCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHH
Q 008503 69 SNPLDILVIGGGATGCGVALDAAT-----RGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHAL 143 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~-----~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l 143 (563)
+.++||+|||||++|+++|+.|++ +|++|+||||.+.. ...++..++...+.+.+++. . +.+.+
T Consensus 6 ~~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~-~~~gra~~l~~~tle~l~~l----G------l~~~l 74 (665)
T 1pn0_A 6 ESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK-VYNGQADGLQCRTLESLKNL----G------LADKI 74 (665)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC-CCSCSCCEECHHHHHHHHTT----T------CHHHH
T ss_pred CCCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC-CCCCceeEEChHHHHHHHHC----C------CHHHH
Confidence 346899999999999999999999 99999999998522 12344444444444444321 0 11122
Q ss_pred HHhhhc-------ccC---CcceE--E--------EecCceechHHHHHHHHHHHHHCC---CEEEcCcEEEEEEEcC--
Q 008503 144 EERKQA-------KDR---SLKGA--V--------VYYDGQMNDSRLNVGLALTAALAG---AAVLNHAEVISLIKDE-- 198 (563)
Q Consensus 144 ~~~~~~-------~~~---~~~~~--~--------~~~~~~~~~~~l~~~l~~~a~~~G---~~i~~~~~v~~l~~~~-- 198 (563)
.+.... ... .+... + .+....++..++...|.+.+.+.| ++++++++|+++..++
T Consensus 75 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~ 154 (665)
T 1pn0_A 75 LSEANDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSK 154 (665)
T ss_dssp HTTCBCCCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGG
T ss_pred HHhccccceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcc
Confidence 211111 000 00000 0 011123566778888888888877 8999999999998864
Q ss_pred ----CCCcEEEEEEEEC---------------------------------------CCCcEEEEEeCeEEEccCcChhhh
Q 008503 199 ----ASNRIIGARIRNN---------------------------------------LSGKEFDTYAKVVVNAAGPFCDSV 235 (563)
Q Consensus 199 ----~~g~v~gv~~~d~---------------------------------------~~g~~~~i~A~~VI~AtG~~s~~l 235 (563)
++..| .|++.+. .+|...+++||+||.|+|.+|. +
T Consensus 155 ~~~~~~~~V-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~-V 232 (665)
T 1pn0_A 155 AEDPEAYPV-TMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSW-V 232 (665)
T ss_dssp TTCTTCCCE-EEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCH-H
T ss_pred cccCCCCCE-EEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCH-H
Confidence 11233 4555541 2354467999999999999985 6
Q ss_pred hhhhcCCC
Q 008503 236 RKLADQNV 243 (563)
Q Consensus 236 ~~~~g~~~ 243 (563)
++.+|...
T Consensus 233 R~~lg~~~ 240 (665)
T 1pn0_A 233 RRTLGFEM 240 (665)
T ss_dssp HHHHTCCC
T ss_pred HHhcCCCC
Confidence 67777653
No 59
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.26 E-value=4.8e-11 Score=126.99 Aligned_cols=154 Identities=16% Similarity=0.198 Sum_probs=95.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchh-------hHHHHhh---ccCc-ccHH----
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVR-------YLEKAVF---NLDY-GQLK---- 137 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~-------~~~~~~~---~~~~-~~~~---- 137 (563)
||+|||||++|+++|+.|++.|++|+||||. ..+|+|..+.|.+..... ++...+. .+.. ....
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 8999999999999999999999999999999 666666555443321110 1111000 0000 0001
Q ss_pred ---HHHHHHHHhhhcccCCc--ceEE----EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEE
Q 008503 138 ---LVFHALEERKQAKDRSL--KGAV----VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARI 208 (563)
Q Consensus 138 ---~~~~~l~~~~~~~~~~~--~~~~----~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~ 208 (563)
...+.+.+.+......+ .++. ..+.+...+..+...|.+.+++.|++++++++| ++..++ +++.||.+
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v 156 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEE
Confidence 11222222222111000 0000 011122345678888888888899999999999 998765 68888876
Q ss_pred EECCCCcEEEEEeCeEEEccCcChhh
Q 008503 209 RNNLSGKEFDTYAKVVVNAAGPFCDS 234 (563)
Q Consensus 209 ~d~~~g~~~~i~A~~VI~AtG~~s~~ 234 (563)
. + ...++.||.||+|||.++..
T Consensus 157 ~---~-~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 157 E---K-RGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp T---T-TEEECCCSEEEECCCCCGGG
T ss_pred E---e-CCCeEEeeeEEECCCCCccc
Confidence 3 2 22457899999999998864
No 60
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.25 E-value=1.2e-10 Score=121.21 Aligned_cols=148 Identities=17% Similarity=0.128 Sum_probs=89.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCC----CCccccch----------hhHHHHhhccCcccH
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRS----TKLIHGGV----------RYLEKAVFNLDYGQL 136 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~----~~~~~~g~----------~~~~~~~~~~~~~~~ 136 (563)
+|||+|||||++|+++|+.|+++|++|+|||+++..++....+ ..+.+.+. .+....+..+ ..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~---~~ 80 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARY---TN 80 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHS---CH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhC---CH
Confidence 5899999999999999999999999999999986432211000 00011110 1111111100 01
Q ss_pred HHHHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcC---CCCcEEEEEEEECCC
Q 008503 137 KLVFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDE---ASNRIIGARIRNNLS 213 (563)
Q Consensus 137 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~---~~g~v~gv~~~d~~~ 213 (563)
....+.+.+.+........+.+.+.+ ++..+...|.+.+.+.|++++++++|+++..++ + +.+ .|.. .+
T Consensus 81 ~~~~~~~~~~Gi~~~~~~~g~~~p~~---~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~-~~~-~v~~---~~ 152 (401)
T 2gqf_A 81 WDFISLVAEQGITYHEKELGQLFCDE---GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK-VRF-VLQV---NS 152 (401)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEETT---CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS-CCE-EEEE---TT
T ss_pred HHHHHHHHhCCCceEECcCCEEccCC---CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC-CeE-EEEE---CC
Confidence 11223333332211100111222222 667888899999999999999999999998761 1 333 3432 22
Q ss_pred CcEEEEEeCeEEEccCcCh
Q 008503 214 GKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 214 g~~~~i~A~~VI~AtG~~s 232 (563)
.+++|+.||+|+|.++
T Consensus 153 ---g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 153 ---TQWQCKNLIVATGGLS 168 (401)
T ss_dssp ---EEEEESEEEECCCCSS
T ss_pred ---CEEECCEEEECCCCcc
Confidence 2799999999999998
No 61
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.25 E-value=1.5e-10 Score=119.63 Aligned_cols=148 Identities=21% Similarity=0.185 Sum_probs=94.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..+||+|||||++|+++|+.|+++|++|+|||+.+.... .+....+...+.+.+.+. . +.+.+.+....
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~-~~~~~~l~~~~~~~l~~~----g------~~~~~~~~~~~ 78 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA-FGAGIYLWHNGLRVLEGL----G------ALDDVLQGSHT 78 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC-CSSEEEEEHHHHHHHHHT----T------CHHHHHTTCBC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC-CCceEEeCccHHHHHHHc----C------CHHHHHhhCCC
Confidence 468999999999999999999999999999999864322 122211222222333221 0 01112111111
Q ss_pred c-----cCCcceEE--E----ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEE
Q 008503 150 K-----DRSLKGAV--V----YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFD 218 (563)
Q Consensus 150 ~-----~~~~~~~~--~----~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~ 218 (563)
. ... ...+ . .....++...+...|.+.+.+.|++++++++|+++.. + + .|++ .+|+ +
T Consensus 79 ~~~~~~~~~-g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-~---~v~~---~~g~--~ 146 (379)
T 3alj_A 79 PPTYETWMH-NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--V-G---RLTL---QTGE--V 146 (379)
T ss_dssp CSCEEEEET-TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--T-T---EEEE---TTSC--E
T ss_pred ccceEEEeC-CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--C-C---EEEE---CCCC--E
Confidence 0 000 0001 0 0123567788899999999999999999999999976 3 4 3443 3443 6
Q ss_pred EEeCeEEEccCcChhhhhhhhcC
Q 008503 219 TYAKVVVNAAGPFCDSVRKLADQ 241 (563)
Q Consensus 219 i~A~~VI~AtG~~s~~l~~~~g~ 241 (563)
++||.||.|+|.+|. +++.++.
T Consensus 147 ~~ad~vV~AdG~~s~-vr~~l~~ 168 (379)
T 3alj_A 147 LEADLIVGADGVGSK-VRDSIGF 168 (379)
T ss_dssp EECSEEEECCCTTCH-HHHHHCC
T ss_pred EEcCEEEECCCccHH-HHHHhcC
Confidence 999999999999985 5566554
No 62
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.23 E-value=1.5e-10 Score=115.92 Aligned_cols=146 Identities=16% Similarity=0.155 Sum_probs=90.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
..++||+|||||++|+++|+.|+++ |++|+|+|+++..+|.......+..... .. .. ..+.+.+.
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~-------~~---~~---~~~~L~~~ 129 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMV-------MR---KP---AHLFLQEL 129 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEE-------EE---TT---THHHHHHT
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhh-------hh---hH---HHHHHHhh
Confidence 5678999999999999999999998 9999999998755443322221111100 00 00 01222222
Q ss_pred hhcccCCcceEEEecCceechHHHHHHHHHHHHHC-CCEEEcCcEEEEEEEcCC-C-C--cEEEEEEEEC---CCC----
Q 008503 147 KQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEA-S-N--RIIGARIRNN---LSG---- 214 (563)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~-G~~i~~~~~v~~l~~~~~-~-g--~v~gv~~~d~---~~g---- 214 (563)
+...... +.+... .+...+...|.+.+.+. |++++++++|+++..+++ + + +|.||.+... .++
T Consensus 130 Gv~~~~~--g~~~~~---~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~ 204 (326)
T 2gjc_A 130 EIPYEDE--GDYVVV---KHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQC 204 (326)
T ss_dssp TCCCEEC--SSEEEE---SCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CC
T ss_pred CcccccC--CCeEEE---cchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeeccccccee
Confidence 2211111 111111 13456777888888874 999999999999988742 1 4 8999987531 111
Q ss_pred --cEEEEEe---------------CeEEEccCcCh
Q 008503 215 --KEFDTYA---------------KVVVNAAGPFC 232 (563)
Q Consensus 215 --~~~~i~A---------------~~VI~AtG~~s 232 (563)
....|.| ++||+|||..+
T Consensus 205 ~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 205 CMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp CCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC-
T ss_pred ccCceEEEEeeccccccccccccCCEEEECcCCCc
Confidence 2357888 88999998755
No 63
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.22 E-value=7.5e-11 Score=128.00 Aligned_cols=150 Identities=23% Similarity=0.314 Sum_probs=89.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC--CCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED--FSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~--~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.+|||+|||||++|+++|+.|++.|++|+|||++. ++...+..+.+.+..+ ..... +..+. ..+..+ ....+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~-~lv~e-i~alg-g~~~~~---~d~~g 100 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKG-HLVKE-VDALG-GLMAKA---IDQAG 100 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHH-HHHHH-HHHTT-CSHHHH---HHHHE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhH-HHHHH-HHHhc-cHHHHH---hhhcc
Confidence 46999999999999999999999999999999973 3321111111111100 11111 00000 001111 11111
Q ss_pred hc---ccCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCe
Q 008503 148 QA---KDRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKV 223 (563)
Q Consensus 148 ~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~ 223 (563)
.. ..............++++..+...+.+.+.+ .|+++ ++++|+.+..++ ++|++|.+ .+| ..+.|+.
T Consensus 101 i~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t---~dG--~~I~Ad~ 172 (651)
T 3ces_A 101 IQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVT---QMG--LKFRAKA 172 (651)
T ss_dssp EEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEE---TTS--EEEEEEE
T ss_pred cchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEE---CCC--CEEECCE
Confidence 00 0000000011112356777888888888887 69999 467999998765 68888876 344 4799999
Q ss_pred EEEccCcChh
Q 008503 224 VVNAAGPFCD 233 (563)
Q Consensus 224 VI~AtG~~s~ 233 (563)
||+|||.|+.
T Consensus 173 VVLATGt~s~ 182 (651)
T 3ces_A 173 VVLTVGTFLD 182 (651)
T ss_dssp EEECCSTTTC
T ss_pred EEEcCCCCcc
Confidence 9999999864
No 64
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.22 E-value=2.5e-11 Score=126.11 Aligned_cols=156 Identities=14% Similarity=0.117 Sum_probs=94.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC-CccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG-TSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g-~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
++||+|||||++|+++|+.|++.|++|+|||+.+...+ ...+...+.+.+.+.+.+. .. .+.+.+....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~l----g~------~~~~~~~~~~ 71 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREA----GV------DRRMARDGLV 71 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHT----TC------CHHHHHHCEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHc----CC------cHHHHhcCCc
Confidence 47999999999999999999999999999999853110 1111112222333333321 10 1111111111
Q ss_pred ------ccCCcceEEEe-------cCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcE
Q 008503 150 ------KDRSLKGAVVY-------YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKE 216 (563)
Q Consensus 150 ------~~~~~~~~~~~-------~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~ 216 (563)
........+.+ ....++...+...|.+.+.+.|++++++++|+++..+++ +.+ .|.+.+ +|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~-~v~~~~--~g~~ 147 (394)
T 1k0i_A 72 HEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERP-YVTFER--DGER 147 (394)
T ss_dssp ESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSC-EEEEEE--TTEE
T ss_pred cceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC-Cce-EEEEec--CCcE
Confidence 00000000000 011234466778888888889999999999999987642 233 455532 4544
Q ss_pred EEEEeCeEEEccCcChhhhhhhhcC
Q 008503 217 FDTYAKVVVNAAGPFCDSVRKLADQ 241 (563)
Q Consensus 217 ~~i~A~~VI~AtG~~s~~l~~~~g~ 241 (563)
.+++||.||.|+|.+|. +++.++.
T Consensus 148 ~~~~a~~vV~AdG~~S~-vr~~l~~ 171 (394)
T 1k0i_A 148 LRLDCDYIAGCDGFHGI-SRQSIPA 171 (394)
T ss_dssp EEEECSEEEECCCTTCS-TGGGSCG
T ss_pred EEEEeCEEEECCCCCcH-HHHhcCc
Confidence 47999999999999996 5555553
No 65
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.21 E-value=1.1e-10 Score=126.37 Aligned_cols=149 Identities=22% Similarity=0.308 Sum_probs=89.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC--CCCCCccCC-CCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED--FSSGTSSRS-TKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~--~~~g~s~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
.+|||+|||||++|+.+|+.|++.|++|+|||++. ++. .++.. .+.+..+ .+... +..+.. .+. ......
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~-~~Cnps~GGia~g-~lv~e-ldalgg-~~~---~~~d~~ 98 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ-MSCNPAIGGIAKG-IVVRE-IDALGG-EMG---KAIDQT 98 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC-CCSCSEEECTTHH-HHHHH-HHHHTC-SHH---HHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC-cCccccccccchH-HHHHH-HHHhhh-HHH---HHhhhc
Confidence 35999999999999999999999999999999973 332 11111 1111000 11111 000000 000 111111
Q ss_pred hhc---ccCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeC
Q 008503 147 KQA---KDRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAK 222 (563)
Q Consensus 147 ~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~ 222 (563)
+.. .......+......+++...+...+.+.+++ .|++++ +++|++|..++ ++|++|.+ .+| ..+.|+
T Consensus 99 gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~--g~V~GV~t---~dG--~~i~Ad 170 (637)
T 2zxi_A 99 GIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKN--NQVVGVRT---NLG--VEYKTK 170 (637)
T ss_dssp EEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESS--SBEEEEEE---TTS--CEEECS
T ss_pred ccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecC--CEEEEEEE---CCC--cEEEeC
Confidence 110 0000000011112356777888888888887 599994 67999998875 68888876 345 379999
Q ss_pred eEEEccCcChh
Q 008503 223 VVVNAAGPFCD 233 (563)
Q Consensus 223 ~VI~AtG~~s~ 233 (563)
.||+|||.|+.
T Consensus 171 aVVLATG~~s~ 181 (637)
T 2zxi_A 171 AVVVTTGTFLN 181 (637)
T ss_dssp EEEECCTTCBT
T ss_pred EEEEccCCCcc
Confidence 99999998753
No 66
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.19 E-value=1.7e-10 Score=123.70 Aligned_cols=58 Identities=19% Similarity=0.196 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcCh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s 232 (563)
..+...|++.++++|++|+++++|++|..++ +++++|++ .+|+ ++.||.||.+++++.
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~---~~g~--~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG--NKIEAVHL---EDGR--RFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEE---TTSC--EEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC--CeEEEEEe---cCCc--EEEcCEEEECCCHHH
Confidence 4678889999999999999999999999886 68999977 3454 799999999888754
No 67
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.18 E-value=2.3e-10 Score=109.87 Aligned_cols=125 Identities=19% Similarity=0.241 Sum_probs=84.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
+|||+|||||++|+.+|+.|++.|.+|+|||+..-..|.+. +.. + .+. .... +.+.+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~-~~~-~-~~~----------~~~~---~~~~~~------ 60 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPF-LPP-K-PPF----------PPGS---LLERAY------ 60 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS-SCC-C-SCC----------CTTC---HHHHHC------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCccc-Ccc-c-ccc----------chhh---HHhhhc------
Confidence 58999999999999999999999999999999831112221 111 0 000 0000 011110
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHC-CCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~-G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+ ..+. ++..+...+.+.+++. |++++ +++|+++..++ +++++|.+ .+|. +++||.||+|+|
T Consensus 61 -d--------~~g~-~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~---~~g~--~i~a~~VV~A~G 122 (232)
T 2cul_A 61 -D--------PKDE-RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRT---WEGP--PARGEKVVLAVG 122 (232)
T ss_dssp -C--------TTCC-CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEE---TTSC--CEECSEEEECCT
T ss_pred -c--------CCCC-CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEE---CCCC--EEECCEEEECCC
Confidence 0 0111 5567777888888886 99998 57999998765 57777765 3443 699999999999
Q ss_pred cChhhh
Q 008503 230 PFCDSV 235 (563)
Q Consensus 230 ~~s~~l 235 (563)
.++...
T Consensus 123 ~~s~~~ 128 (232)
T 2cul_A 123 SFLGAR 128 (232)
T ss_dssp TCSSCE
T ss_pred CChhhc
Confidence 987643
No 68
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.17 E-value=4.2e-09 Score=106.47 Aligned_cols=38 Identities=29% Similarity=0.441 Sum_probs=34.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
.+||+|||||++|+++|+.|+++|++|+||||.+..+|
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg 39 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcc
Confidence 37999999999999999999999999999999864433
No 69
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.15 E-value=2.4e-10 Score=119.88 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~ 233 (563)
..+...|.+.+.++|++|+++++|++|..++ +++++|.+ ++ .++.||.||+|+|++..
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~----~g--~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIEN--GKAAGIIA----DD--RIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEE----TT--EEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEE----CC--EEEECCEEEECCCHHHH
Confidence 5678889999999999999999999999875 67777754 23 47999999999998764
No 70
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.15 E-value=4.1e-10 Score=117.13 Aligned_cols=147 Identities=20% Similarity=0.147 Sum_probs=85.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCc--cccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKL--IHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
+..+||+|||||++|+++|+.|+++|++|+|+|+.+.... ....++ ...+.+.+.+. .... ...
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~--~~~~g~~l~~~~~~~l~~~----g~~~--------~~~ 68 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLS--GFGTGIVVQPELVHYLLEQ----GVEL--------DSI 68 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCC--CCSCEEECCHHHHHHHHHT----TCCG--------GGT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC--ccccccccChhHHHHHHHc----CCcc--------ccc
Confidence 4568999999999999999999999999999999853211 111221 11122222211 0000 000
Q ss_pred hhc-------cc-CC-cceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEE
Q 008503 147 KQA-------KD-RS-LKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEF 217 (563)
Q Consensus 147 ~~~-------~~-~~-~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~ 217 (563)
... .. .+ ...........++...+...|.+.+ .|++++++++|+++..+++ .+. |.+ .+|.
T Consensus 69 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~--~v~-v~~---~~g~-- 138 (397)
T 2vou_A 69 SVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSE--TVQ-MRF---SDGT-- 138 (397)
T ss_dssp CBCCCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSS--CEE-EEE---TTSC--
T ss_pred cccccceEEEecCCCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCC--EEE-EEE---CCCC--
Confidence 000 00 00 0000001111233345555555543 5899999999999988763 442 433 3443
Q ss_pred EEEeCeEEEccCcChhhhhhhhc
Q 008503 218 DTYAKVVVNAAGPFCDSVRKLAD 240 (563)
Q Consensus 218 ~i~A~~VI~AtG~~s~~l~~~~g 240 (563)
+++||.||.|+|.+|. +++.++
T Consensus 139 ~~~ad~vV~AdG~~S~-vr~~~~ 160 (397)
T 2vou_A 139 KAEANWVIGADGGASV-VRKRLL 160 (397)
T ss_dssp EEEESEEEECCCTTCH-HHHHHH
T ss_pred EEECCEEEECCCcchh-HHHHhc
Confidence 6899999999999986 455555
No 71
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.14 E-value=5.8e-11 Score=127.20 Aligned_cols=142 Identities=20% Similarity=0.106 Sum_probs=89.1
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
...+||+|||||++|+++|+.|++.|++|+|||+.+..++. +...+.....+.+. .+.. .+. .
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~--~~~~~~~~~~~~l~----~~g~------~~~---~-- 152 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH--NVLHLWPFTIHDLR----ALGA------KKF---Y-- 152 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC--CEEECCHHHHHHHH----TTTH------HHH---C--
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC--CcccCChhHHHHHH----HcCC------ccc---c--
Confidence 45789999999999999999999999999999998643221 11111111111111 0000 000 0
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
..+.. .....++...+...|.+.+.+.|++++++++|+++..+++++..+.|.+.+..+|+..+++||+||+|+
T Consensus 153 ---~~~~~---~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~ 226 (497)
T 2bry_A 153 ---GRFCT---GTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAA 226 (497)
T ss_dssp ---TTTTC---TTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECC
T ss_pred ---ccccc---cccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECC
Confidence 00000 001134567788888888888999999999999998752113345666643113322368999999999
Q ss_pred CcChh
Q 008503 229 GPFCD 233 (563)
Q Consensus 229 G~~s~ 233 (563)
|.++.
T Consensus 227 G~~S~ 231 (497)
T 2bry_A 227 GGKFV 231 (497)
T ss_dssp CTTCC
T ss_pred CCCcc
Confidence 99874
No 72
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.13 E-value=3e-10 Score=123.23 Aligned_cols=151 Identities=20% Similarity=0.263 Sum_probs=88.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC-CCCCCccCC-CCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED-FSSGTSSRS-TKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~-~~~g~s~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
+.+|||+|||||++|+.+|+.|++.|++|+|||+.. ..++.++.. .+.+. ....+.+. ..+.. ... ......
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia-~~~lv~el-~al~g-~~~---~~~d~~ 92 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVA-KGQITREI-DALGG-EMG---KAIDAT 92 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHH-HHHHHHHH-HHHTC-SHH---HHHHHH
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhh-HHHHHHHH-Hhccc-HHH---HHHHhc
Confidence 457999999999999999999999999999999983 222222211 11110 00111110 00000 000 011111
Q ss_pred hhc---ccCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeC
Q 008503 147 KQA---KDRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAK 222 (563)
Q Consensus 147 ~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~ 222 (563)
+.. .......++......++...+...+.+.+.+ .|++++. .+|+.+..++ ++|.||.+ .+|. .+.|+
T Consensus 93 gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~--g~V~GV~t---~~G~--~i~Ad 164 (641)
T 3cp8_A 93 GIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANS--GKFSSVTV---RSGR--AIQAK 164 (641)
T ss_dssp EEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEET--TEEEEEEE---TTSC--EEEEE
T ss_pred CCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecC--CEEEEEEE---CCCc--EEEeC
Confidence 110 0000000000111356777888888888877 4999964 5899998765 67888865 3453 79999
Q ss_pred eEEEccCcChh
Q 008503 223 VVVNAAGPFCD 233 (563)
Q Consensus 223 ~VI~AtG~~s~ 233 (563)
.||+|||.|+.
T Consensus 165 ~VVLATG~~s~ 175 (641)
T 3cp8_A 165 AAILACGTFLN 175 (641)
T ss_dssp EEEECCTTCBT
T ss_pred EEEECcCCCCC
Confidence 99999999864
No 73
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.13 E-value=2.9e-10 Score=123.32 Aligned_cols=63 Identities=21% Similarity=0.280 Sum_probs=50.2
Q ss_pred HHCCCEEEcCcEEEEEEEcCC--CCcEEEEEEEECCCCcEEEEEeC-eEEEccCcC-hhhhhhhhcCC
Q 008503 179 ALAGAAVLNHAEVISLIKDEA--SNRIIGARIRNNLSGKEFDTYAK-VVVNAAGPF-CDSVRKLADQN 242 (563)
Q Consensus 179 ~~~G~~i~~~~~v~~l~~~~~--~g~v~gv~~~d~~~g~~~~i~A~-~VI~AtG~~-s~~l~~~~g~~ 242 (563)
.+.|++|++++.|++|..+.+ +++++||.+.+ .+|+..+++|+ .||+|+|++ |.+++.+.|+.
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~-~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIG 304 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT-HKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIG 304 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES-STTCEEEEEEEEEEEECSCTTTHHHHHHHTTBS
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe-cCCcEEEEEECCEEEEeCCccCCHHHHHHcCCC
Confidence 357899999999999998731 27899999875 35677789995 799999987 67777777765
No 74
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.10 E-value=4.4e-10 Score=112.38 Aligned_cols=113 Identities=15% Similarity=0.127 Sum_probs=70.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
++.|||+|||||++|+++|+.|++.|++|+|+|++..++. ...+. | ++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~-~~~~~---~-~~~-------------------------- 52 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNR-VTQNS---H-GFI-------------------------- 52 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGG-GSSCB---C-CST--------------------------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCe-eeeec---C-Ccc--------------------------
Confidence 5679999999999999999999999999999999854321 11110 0 000
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
..+ .+.+..+.....+.+.+.+...+....+..+...++ +.. .|.. .++ .++.+|.||+||
T Consensus 53 -----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~~---~~g--~~~~a~~liiAT 113 (304)
T 4fk1_A 53 -----------TRD-GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQST-GLF-EIVT---KDH--TKYLAERVLLAT 113 (304)
T ss_dssp -----------TCT-TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTT-SCE-EEEE---TTC--CEEEEEEEEECC
T ss_pred -----------CCC-CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCC-CcE-EEEE---CCC--CEEEeCEEEEcc
Confidence 000 133445555555556566555555556666665443 332 2322 344 378999999999
Q ss_pred CcC
Q 008503 229 GPF 231 (563)
Q Consensus 229 G~~ 231 (563)
|..
T Consensus 114 Gs~ 116 (304)
T 4fk1_A 114 GMQ 116 (304)
T ss_dssp CCE
T ss_pred CCc
Confidence 974
No 75
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.09 E-value=5.2e-10 Score=113.88 Aligned_cols=130 Identities=16% Similarity=0.152 Sum_probs=82.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHH-HHhhccCcccHHHHHHHHHHhhhc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLE-KAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
++||+|||||++|+++|+.|+++|++|+|||+++..+|..... ........ .....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~----~~~~~~~~~~~~~~------------------- 59 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHA----WHSLHLFSPAGWSS------------------- 59 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGS----CTTCBCSSCGGGSC-------------------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCC----CCCcEecCchhhhh-------------------
Confidence 4899999999999999999999999999999986444332110 00000000 00000
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+.+... ...........+...+.+.+.+.|++++++++|+++..++ +.+.+|. +.. .++.+|.||+|+|
T Consensus 60 -~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~-----~~~-g~~~~d~vV~AtG 129 (357)
T 4a9w_A 60 -IPGWPMP-ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVA-----RDG-RQWLARAVISATG 129 (357)
T ss_dssp -CSSSCCC-CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEE-----TTS-CEEEEEEEEECCC
T ss_pred -CCCCCCC-CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEE-----eCC-CEEEeCEEEECCC
Confidence 0000000 0111223345677778888888999999999999998875 3332242 222 2799999999999
Q ss_pred cChh
Q 008503 230 PFCD 233 (563)
Q Consensus 230 ~~s~ 233 (563)
.++.
T Consensus 130 ~~~~ 133 (357)
T 4a9w_A 130 TWGE 133 (357)
T ss_dssp SGGG
T ss_pred CCCC
Confidence 8774
No 76
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.06 E-value=1.6e-09 Score=117.48 Aligned_cols=61 Identities=20% Similarity=0.315 Sum_probs=47.3
Q ss_pred HCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEe-CeEEEccCcC-hhhhhhhhcC
Q 008503 180 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYA-KVVVNAAGPF-CDSVRKLADQ 241 (563)
Q Consensus 180 ~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A-~~VI~AtG~~-s~~l~~~~g~ 241 (563)
+.|++|++++.|++|..++++++++||.+.+ .+|...+++| |.||+|+|++ +..++...|+
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~-~~g~~~~v~A~keVILsaGa~~sp~lL~~SGI 280 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVT-AAGNELNFFADREVILSQGVFETPKLLMLSGI 280 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEE-TTSCEEEEEEEEEEEECSHHHHHHHHHHHTTE
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEe-CCCcEEEEEeeeEEEEcccccCChHHHHHcCC
Confidence 4689999999999999874227999999986 3466678999 6899999986 4555555443
No 77
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.06 E-value=1.4e-09 Score=113.14 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=83.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCc-cCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc-
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTS-SRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA- 149 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 149 (563)
.+|+|||||++|+++|+.|+++|++|+|+||.+...... +..-.+...+.+.+++.. . ... ...+.+....
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg----~--~~~-~~~~~~~~~~~ 74 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECL----P--AEN-WLAFEEASRYI 74 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHS----C--HHH-HHHHHHHCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcC----C--hHH-HHHhhhhhccc
Confidence 479999999999999999999999999999975321111 111111122333333210 0 000 1111111100
Q ss_pred ------ccCCcc-----eEE--------EecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEE
Q 008503 150 ------KDRSLK-----GAV--------VYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRN 210 (563)
Q Consensus 150 ------~~~~~~-----~~~--------~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d 210 (563)
...... ... ......++...+...|.+ ..+..++++++|++++..++ +.| .|.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~---~~~~~v~~~~~v~~~~~~~~-~~v-~v~~-- 147 (412)
T 4hb9_A 75 GGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK---GLANTIQWNKTFVRYEHIEN-GGI-KIFF-- 147 (412)
T ss_dssp CCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHT---TCTTTEECSCCEEEEEECTT-SCE-EEEE--
T ss_pred CcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHh---hccceEEEEEEEEeeeEcCC-CeE-EEEE--
Confidence 000000 000 000112333444444443 23567999999999988665 444 2433
Q ss_pred CCCCcEEEEEeCeEEEccCcChhhhhhhhcCC
Q 008503 211 NLSGKEFDTYAKVVVNAAGPFCDSVRKLADQN 242 (563)
Q Consensus 211 ~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g~~ 242 (563)
.+|. +++||+||.|+|.+|. +++.++..
T Consensus 148 -~dG~--~~~adlvVgADG~~S~-vR~~l~~~ 175 (412)
T 4hb9_A 148 -ADGS--HENVDVLVGADGSNSK-VRKQYLPF 175 (412)
T ss_dssp -TTSC--EEEESEEEECCCTTCH-HHHHHSTT
T ss_pred -CCCC--EEEeeEEEECCCCCcc-hHHHhCCC
Confidence 4554 6899999999999995 45555444
No 78
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.02 E-value=2.1e-09 Score=113.53 Aligned_cols=152 Identities=15% Similarity=0.050 Sum_probs=85.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCC--cEEEEeccCCCCCCccCCCCc-----------------cccc---hhhHHH
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGL--RVGLVEREDFSSGTSSRSTKL-----------------IHGG---VRYLEK 126 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~~~~~g~s~~~~~~-----------------~~~g---~~~~~~ 126 (563)
...+||+|||||++|+++|+.|++.|+ +|+|+|+.+..+|........ ++.+ ..+...
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 346899999999999999999999999 999999986444432211100 0000 000000
Q ss_pred HhhccCcccHHHHHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEE
Q 008503 127 AVFNLDYGQLKLVFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGA 206 (563)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv 206 (563)
....+....... +.. ...+... ...........+...+.+.+.+.+..++++++|+++..++ + .+.|
T Consensus 84 ~~~~l~~~~~~~----~~~-----~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~-~~~V 150 (447)
T 2gv8_A 84 LYRDLQTNTPIE----LMG-----YCDQSFK-PQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD--G-SWVV 150 (447)
T ss_dssp CCTTCBCSSCHH----HHS-----CTTCCCC-TTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET--T-EEEE
T ss_pred hhhhhccCCCHH----Hhc-----cCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--C-eEEE
Confidence 000000000000 000 0000000 0001122344566666666766788899999999998764 2 3456
Q ss_pred EEEECCCCc-EEEEEeCeEEEccCcChh
Q 008503 207 RIRNNLSGK-EFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 207 ~~~d~~~g~-~~~i~A~~VI~AtG~~s~ 233 (563)
++.+..+|+ ..++.+|.||+|+|.++.
T Consensus 151 ~~~~~~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 151 TYKGTKAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp EEEESSTTCCEEEEEESEEEECCCSSSS
T ss_pred EEeecCCCCeeEEEEeCEEEECCCCCCC
Confidence 665422354 347899999999999874
No 79
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.02 E-value=1.3e-08 Score=107.79 Aligned_cols=40 Identities=30% Similarity=0.439 Sum_probs=34.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC------CcEEEEeccCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRG------LRVGLVEREDFSSG 108 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G------~~V~llEk~~~~~g 108 (563)
...+||+|||||++|+++|+.|+++| ++|+|+|+++..+|
T Consensus 3 ~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 3 DGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 34589999999999999999999999 99999999864333
No 80
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.02 E-value=2.2e-09 Score=98.46 Aligned_cols=118 Identities=19% Similarity=0.150 Sum_probs=82.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
|||+|||||++|+.+|..|++.|.+|+|+|+.+-.. .++. .+. . .
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~---~~~~-~~~----------------~---------------~ 46 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV---KGVS-RVP----------------N---------------Y 46 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT---TTCS-CCC----------------C---------------S
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc---cCch-hhh----------------c---------------c
Confidence 799999999999999999999999999999985110 0000 000 0 0
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
+.+ ...+.+..+...+.+.+++.|++++++ +|+++..+++ .+ .|.+ .++ ++.+|.||+|+|.+
T Consensus 47 ~~~-------~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~--~~-~v~~---~~g---~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 47 PGL-------LDEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGG--VF-EVET---EEG---VEKAERLLLCTHKD 109 (180)
T ss_dssp TTC-------TTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS--SE-EEEC---SSC---EEEEEEEEECCTTC
T ss_pred CCC-------cCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC--EE-EEEE---CCC---EEEECEEEECCCCC
Confidence 000 011345677778888888999999999 9999987653 32 3332 223 79999999999998
Q ss_pred hhhhhhhhcCC
Q 008503 232 CDSVRKLADQN 242 (563)
Q Consensus 232 s~~l~~~~g~~ 242 (563)
+. +.+.+|.+
T Consensus 110 ~~-~~~~~g~~ 119 (180)
T 2ywl_A 110 PT-LPSLLGLT 119 (180)
T ss_dssp CH-HHHHHTCC
T ss_pred CC-ccccCCCC
Confidence 74 55555543
No 81
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.01 E-value=1.2e-09 Score=114.37 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcCh
Q 008503 167 DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 167 ~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s 232 (563)
+..+...|.+.+.++|++|+++++|++|..++ +++ | . .++ .++.||.||+|+|++.
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~v--V--~--~~g--~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEE--KKV--Y--T--RDN--EEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTT--TEE--E--E--TTC--CEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC--CEE--E--E--eCC--cEEEeCEEEECCCHHH
Confidence 36788889999999999999999999998765 454 3 2 334 3799999999999875
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.99 E-value=5.2e-09 Score=111.05 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=88.5
Q ss_pred ccEEEECCchHHHHHHHHHHH---CCCc---EEEEeccCCCCCCccCC--CCccccchhh----HHHHhhccC-----cc
Q 008503 72 LDILVIGGGATGCGVALDAAT---RGLR---VGLVEREDFSSGTSSRS--TKLIHGGVRY----LEKAVFNLD-----YG 134 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~---~G~~---V~llEk~~~~~g~s~~~--~~~~~~g~~~----~~~~~~~~~-----~~ 134 (563)
+||+|||||++|+++|..|++ .|++ |+|+|+.+..+|....+ .+....+... ......+.. +.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999986444432211 1111001000 000000000 00
Q ss_pred cHHHHHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCE--EEcCcEEEEEEEcCCCCcEEEEEEEECC
Q 008503 135 QLKLVFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAA--VLNHAEVISLIKDEASNRIIGARIRNNL 212 (563)
Q Consensus 135 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~--i~~~~~v~~l~~~~~~g~v~gv~~~d~~ 212 (563)
.+..- + . . . ......+....+...+.+.+.+.|++ ++++++|+.+..+++ +..+.|.+.+..
T Consensus 83 ~~~~~-~----~-------~--~-~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~-~~~~~V~~~~~~ 146 (464)
T 2xve_A 83 DYTFD-E----H-------F--G-KPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNED-SQTFTVTVQDHT 146 (464)
T ss_dssp TBCHH-H----H-------H--S-SCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETT-TTEEEEEEEETT
T ss_pred CCCCC-c----c-------c--C-CCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCC-CCcEEEEEEEcC
Confidence 00000 0 0 0 0 00022344566777777778888988 999999999988753 335667776533
Q ss_pred CCcEEEEEeCeEEEccCcChh
Q 008503 213 SGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 213 ~g~~~~i~A~~VI~AtG~~s~ 233 (563)
+|+..++.+|.||+|||.++.
T Consensus 147 ~g~~~~~~~d~VVvAtG~~s~ 167 (464)
T 2xve_A 147 TDTIYSEEFDYVVCCTGHFST 167 (464)
T ss_dssp TTEEEEEEESEEEECCCSSSS
T ss_pred CCceEEEEcCEEEECCCCCCC
Confidence 454467899999999998764
No 83
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.99 E-value=1.8e-09 Score=112.30 Aligned_cols=151 Identities=19% Similarity=0.250 Sum_probs=87.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC-ccCCCCccc-cchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT-SSRSTKLIH-GGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~-s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
+.++||+|||||++|+++|+.|++.|++|+||||.+..... .+....+.. .+.+.+.+. . +.+.+...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~----g------l~~~~~~~ 93 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKA----G------LLQTYYDL 93 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHT----T------CHHHHHHH
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhc----C------hHHHHHHh
Confidence 45689999999999999999999999999999998532211 111111111 122333221 0 11122211
Q ss_pred hhcccC---CcceEE--Ee--------cCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCC
Q 008503 147 KQAKDR---SLKGAV--VY--------YDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLS 213 (563)
Q Consensus 147 ~~~~~~---~~~~~~--~~--------~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~ 213 (563)
...... ...+.. .. ....++...+...|.+.+. +++++++++|+++..++ +.+ .|++ .+
T Consensus 94 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v-~v~~---~~ 165 (398)
T 2xdo_A 94 ALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGK--KKW-TLTF---EN 165 (398)
T ss_dssp CBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEECS--SSE-EEEE---TT
T ss_pred hcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEECC--CEE-EEEE---CC
Confidence 110000 000000 00 1123455666666666543 36899999999998875 343 2433 34
Q ss_pred CcEEEEEeCeEEEccCcChhhhhhhhc
Q 008503 214 GKEFDTYAKVVVNAAGPFCDSVRKLAD 240 (563)
Q Consensus 214 g~~~~i~A~~VI~AtG~~s~~l~~~~g 240 (563)
|. +++||.||.|+|.+|. +++.++
T Consensus 166 g~--~~~ad~vV~AdG~~S~-vR~~l~ 189 (398)
T 2xdo_A 166 KP--SETADLVILANGGMSK-VRKFVT 189 (398)
T ss_dssp SC--CEEESEEEECSCTTCS-CCTTTC
T ss_pred Cc--EEecCEEEECCCcchh-HHhhcc
Confidence 43 6899999999999985 444444
No 84
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.97 E-value=1.4e-09 Score=109.90 Aligned_cols=123 Identities=11% Similarity=0.069 Sum_probs=80.1
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
...+||+|||||++|+++|+.|+++|++|+|||+.+. .+....|.+...... .
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~---~~~~~gg~~~~~~~~-----~------------------- 72 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMA---NGIAAGGQLTTTTEI-----E------------------- 72 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSB---TTBCTTCGGGGSSEE-----C-------------------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC---CCCCcCcccccchhh-----c-------------------
Confidence 4568999999999999999999999999999999741 111111111100000 0
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
..+. ....+.+..+...+.+.+.+.|+++++++ |+++..++ +.+ .+... .++....+.++.||+|+
T Consensus 73 -~~~~-------~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~-~v~~~--~~~~~~~~~~d~vvlAt 138 (338)
T 3itj_A 73 -NFPG-------FPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSS--KPF-KLWTE--FNEDAEPVTTDAIILAT 138 (338)
T ss_dssp -CSTT-------CTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSS--SSE-EEEET--TCSSSCCEEEEEEEECC
T ss_pred -ccCC-------CcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEE-EEEEE--ecCCCcEEEeCEEEECc
Confidence 0000 01124556777788888889999999998 99988764 343 23221 11222468999999999
Q ss_pred CcCh
Q 008503 229 GPFC 232 (563)
Q Consensus 229 G~~s 232 (563)
|...
T Consensus 139 G~~~ 142 (338)
T 3itj_A 139 GASA 142 (338)
T ss_dssp CEEE
T ss_pred CCCc
Confidence 9854
No 85
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.97 E-value=2.3e-09 Score=115.73 Aligned_cols=138 Identities=18% Similarity=0.158 Sum_probs=87.9
Q ss_pred CCccEEEECCchHHHHHHHHHH-HCCCcEEEEeccCCCCCCccCCCCccccchhh-HHHHhhccCcccHHHHHHHHHHhh
Q 008503 70 NPLDILVIGGGATGCGVALDAA-TRGLRVGLVEREDFSSGTSSRSTKLIHGGVRY-LEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la-~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.++||+|||||++|+++|+.|+ +.|++|+|||+++..+|+...+. .+|... .........+.. ... .
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~---ypg~~~d~~s~~~~~~~~~--~~~----~-- 75 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNR---YPGALSDTESHLYRFSFDR--DLL----Q-- 75 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCC---CTTCEEEEEGGGSSCCSCH--HHH----H--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccC---CCCceecCCcceeeecccc--ccc----c--
Confidence 4689999999999999999999 99999999999864444432221 111100 000000000000 000 0
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCC--EEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEE
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 225 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~--~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI 225 (563)
.+.+.....+..++...+.+.+.+.|+ +++++++|+++..+++ +..+.|.+ .+|+ ++.+|.||
T Consensus 76 ---------~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~~~V~~---~~G~--~i~ad~lV 140 (540)
T 3gwf_A 76 ---------ESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD-ENLWEVTT---DHGE--VYRAKYVV 140 (540)
T ss_dssp ---------HCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT-TTEEEEEE---TTSC--EEEEEEEE
T ss_pred ---------CCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC-CCEEEEEE---cCCC--EEEeCEEE
Confidence 000112234556677777778888898 8999999999988764 34555654 3453 68999999
Q ss_pred EccCcChh
Q 008503 226 NAAGPFCD 233 (563)
Q Consensus 226 ~AtG~~s~ 233 (563)
+|+|.++.
T Consensus 141 ~AtG~~s~ 148 (540)
T 3gwf_A 141 NAVGLLSA 148 (540)
T ss_dssp ECCCSCCS
T ss_pred ECCccccc
Confidence 99998764
No 86
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.93 E-value=3.2e-09 Score=107.42 Aligned_cols=119 Identities=22% Similarity=0.226 Sum_probs=80.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+..+||+|||||++|+++|+.|+++|++|+|||+++..+|..... +......
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~---------~~~~~~~------------------- 54 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL---------YPEKYIY------------------- 54 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT---------CTTSEEC-------------------
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc---------CCCceee-------------------
Confidence 346899999999999999999999999999999986433211000 0000000
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
..+ ....+.+..+...+.+.+.+.|++++++++|+.+..++ + .+.|.. .++ .++.+|.||+|+
T Consensus 55 -~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~-~~~v~~---~~g--~~~~~~~lv~At 117 (335)
T 2zbw_A 55 -DVA--------GFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREG--D-LFKVTT---SQG--NAYTAKAVIIAA 117 (335)
T ss_dssp -CST--------TCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEET--T-EEEEEE---TTS--CEEEEEEEEECC
T ss_pred -ccC--------CCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECC--C-EEEEEE---CCC--CEEEeCEEEECC
Confidence 000 00124456677777777888899999999999998764 2 222332 334 368999999999
Q ss_pred CcCh
Q 008503 229 GPFC 232 (563)
Q Consensus 229 G~~s 232 (563)
|..+
T Consensus 118 G~~~ 121 (335)
T 2zbw_A 118 GVGA 121 (335)
T ss_dssp TTSE
T ss_pred CCCC
Confidence 9864
No 87
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.93 E-value=3.6e-09 Score=108.32 Aligned_cols=118 Identities=19% Similarity=0.116 Sum_probs=81.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..+||+|||||++|+++|+.|+++|++|+|||+.+..+|..... .+.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~----~~~----------------------------- 59 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL----YPE----------------------------- 59 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT----CTT-----------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc----CCC-----------------------------
Confidence 46899999999999999999999999999999986433211000 000
Q ss_pred ccCCcceEEE-ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 150 KDRSLKGAVV-YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 150 ~~~~~~~~~~-~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
. ..+. +.-..+++..+...+.+.+.+.|++++++++|+.+..+++ +. +.|.. .++ .++.+|.||+|+
T Consensus 60 ---~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~~v~~---~~g--~~~~~~~li~At 127 (360)
T 3ab1_A 60 ---K--HIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDD-GT-FETRT---NTG--NVYRSRAVLIAA 127 (360)
T ss_dssp ---S--EECCSTTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTT-SC-EEEEE---TTS--CEEEEEEEEECC
T ss_pred ---c--ccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ce-EEEEE---CCC--cEEEeeEEEEcc
Confidence 0 0000 0001245567777888888888999999999999988653 23 23433 334 368999999999
Q ss_pred CcCh
Q 008503 229 GPFC 232 (563)
Q Consensus 229 G~~s 232 (563)
|..+
T Consensus 128 G~~~ 131 (360)
T 3ab1_A 128 GLGA 131 (360)
T ss_dssp TTCS
T ss_pred CCCc
Confidence 9864
No 88
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.93 E-value=2.6e-09 Score=115.60 Aligned_cols=63 Identities=21% Similarity=0.197 Sum_probs=48.0
Q ss_pred HHCCCEEEcCcEEEEEEEc---CCCCcEEEEEEEECCCC-cEEEEEe-CeEEEccCcC-hhhhhhhhcCC
Q 008503 179 ALAGAAVLNHAEVISLIKD---EASNRIIGARIRNNLSG-KEFDTYA-KVVVNAAGPF-CDSVRKLADQN 242 (563)
Q Consensus 179 ~~~G~~i~~~~~v~~l~~~---~~~g~v~gv~~~d~~~g-~~~~i~A-~~VI~AtG~~-s~~l~~~~g~~ 242 (563)
.+.+++|++++.|++|..+ ++.++++||.+.+ ..| +..+++| |.||+|+|++ +.+++.+.|+.
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~-~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIG 287 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAE-QEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIG 287 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEES-STTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEE
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEE-CCCceEEEEEeeeEEEEecCCcCChHHHHhcCCC
Confidence 4568999999999999886 2114789999875 334 5578999 7899999976 67777766654
No 89
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.93 E-value=1.1e-09 Score=110.32 Aligned_cols=117 Identities=21% Similarity=0.141 Sum_probs=80.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..+||+|||||++|+++|+.|+++|++|+|||+.+..+|..... .++...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~----~~~~~~-------------------------- 55 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL----YPEKYI-------------------------- 55 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH----CTTSEE--------------------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc----CCCceE--------------------------
Confidence 35899999999999999999999999999999986433221000 000000
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.. .+....+.+..+...+.+.+.+.|++++++++|+++..+++ + .+.|.. .++ ++.+|.||+|+|
T Consensus 56 --~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~-~~~v~~---~~g---~~~~d~vVlAtG 120 (332)
T 3lzw_A 56 --YD-----VAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQAD-G-VFKLVT---NEE---THYSKTVIITAG 120 (332)
T ss_dssp --CC-----STTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTT-S-CEEEEE---SSE---EEEEEEEEECCT
T ss_pred --ec-----cCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCC-C-cEEEEE---CCC---EEEeCEEEECCC
Confidence 00 00011234567777888888888999999999999988753 2 233433 222 499999999999
Q ss_pred cC
Q 008503 230 PF 231 (563)
Q Consensus 230 ~~ 231 (563)
.+
T Consensus 121 ~~ 122 (332)
T 3lzw_A 121 NG 122 (332)
T ss_dssp TS
T ss_pred CC
Confidence 84
No 90
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.92 E-value=3.9e-09 Score=114.23 Aligned_cols=138 Identities=20% Similarity=0.226 Sum_probs=86.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhh-HHHHhhccCcccHHHHHHHHHHhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRY-LEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
...+||+|||||++|+++|+.|++.|++|+|||+++..+|+...+. .+|... .+.......+. .... .
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~---ypg~~~dv~s~~y~~~f~--~~~~----~-- 87 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNR---YPGARCDVESIDYSYSFS--PELE----Q-- 87 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC---CTTCBCSSCTTTSSCCSC--HHHH----H--
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC---CCCceeCCCchhcccccc--cccc----c--
Confidence 4568999999999999999999999999999999864444322111 011100 00000000000 0000 0
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCC--EEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEE
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 225 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~--~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI 225 (563)
.+.+.....+..++...+.+.+.+.|+ +++++++|+++..+++ ...+.|.+ .+|+ ++.+|.||
T Consensus 88 ---------~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~w~V~~---~~G~--~i~ad~lV 152 (549)
T 4ap3_A 88 ---------EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE-GLRWTVRT---DRGD--EVSARFLV 152 (549)
T ss_dssp ---------HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT-TTEEEEEE---TTCC--EEEEEEEE
T ss_pred ---------CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC-CCEEEEEE---CCCC--EEEeCEEE
Confidence 001112233456667777777888888 8999999999988764 44555654 3453 68999999
Q ss_pred EccCcCh
Q 008503 226 NAAGPFC 232 (563)
Q Consensus 226 ~AtG~~s 232 (563)
+|+|.++
T Consensus 153 ~AtG~~s 159 (549)
T 4ap3_A 153 VAAGPLS 159 (549)
T ss_dssp ECCCSEE
T ss_pred ECcCCCC
Confidence 9999765
No 91
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.91 E-value=4e-09 Score=105.72 Aligned_cols=114 Identities=21% Similarity=0.188 Sum_probs=71.8
Q ss_pred cCCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 67 NNSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 67 ~~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
|...+|||+|||||++|+++|+.|++.|++|+|+|++.++ |+ ..+.+.++. +
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~g-G~-~~~~~~i~~---~----------------------- 53 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPG-GQ-MANTEEVEN---F----------------------- 53 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT-GG-GGGCSCBCC---S-----------------------
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC-Ce-eecccccCC---c-----------------------
Confidence 3456899999999999999999999999999999997542 22 122221110 0
Q ss_pred hhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEE
Q 008503 147 KQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVN 226 (563)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~ 226 (563)
+.-..+...++.........+.+..+..+..+....... ..+ + . .++ .++++|.||+
T Consensus 54 -------------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~--~--~~~--~~~~~d~lii 110 (312)
T 4gcm_A 54 -------------PGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE--YKV--I--N--FGN--KELTAKAVII 110 (312)
T ss_dssp -------------TTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS--CEE--E--E--CSS--CEEEEEEEEE
T ss_pred -------------CCccccchHHHHHHHHHHHhhccccccceeeeeeeeeec--cee--e--c--cCC--eEEEeceeEE
Confidence 000112334455555556667777777776665554332 121 1 1 233 4799999999
Q ss_pred ccCcC
Q 008503 227 AAGPF 231 (563)
Q Consensus 227 AtG~~ 231 (563)
|||..
T Consensus 111 AtGs~ 115 (312)
T 4gcm_A 111 ATGAE 115 (312)
T ss_dssp CCCEE
T ss_pred cccCc
Confidence 99974
No 92
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.90 E-value=9.9e-09 Score=102.57 Aligned_cols=112 Identities=21% Similarity=0.157 Sum_probs=77.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
|||+|||||++|+++|+.|++.|+ +|+|||++..+ |..... ..++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~g-g~~~~~-~~~~~------------------------------- 48 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPG-GQITGS-SEIEN------------------------------- 48 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTT-CGGGGC-SCBCC-------------------------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCC-cccccc-ccccc-------------------------------
Confidence 799999999999999999999999 99999997432 221111 00000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+.+ ...+++..+...+.+.+.+.|+++++ ++|+++..++ +. +.|.. .++ .++.+|.||+|+|.
T Consensus 49 ~~~~-------~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~-~~v~~---~~g--~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 49 YPGV-------KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SH-FVILA---EDG--KTFEAKSVIIATGG 112 (311)
T ss_dssp STTC-------CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEET--TE-EEEEE---TTS--CEEEEEEEEECCCE
T ss_pred CCCC-------cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CE-EEEEE---cCC--CEEECCEEEECCCC
Confidence 0000 01245566777777778888999998 7899998764 22 22332 334 36899999999997
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
++
T Consensus 113 ~~ 114 (311)
T 2q0l_A 113 SP 114 (311)
T ss_dssp EE
T ss_pred CC
Confidence 55
No 93
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.90 E-value=4e-09 Score=111.16 Aligned_cols=58 Identities=17% Similarity=0.371 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
..+...|.+.+++.|++++++++|++|..+++ +++++|++ .+|+ ++.|+.||.++|.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~---~~G~--~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKS---SDGE--IAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEE---TTSC--EEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEE---CCCc--EEECCEEEECCCcc
Confidence 57888999999999999999999999998433 78989876 3443 69999999999987
No 94
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.89 E-value=7.3e-09 Score=103.83 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=77.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.+||+|||||++|+++|+.|+++|++|+|||++ + +|... .....+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~-gg~~~-~~~~~~~------------------------------- 60 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-P-GGQLT-EAGIVDD------------------------------- 60 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-T-TGGGG-GCCEECC-------------------------------
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-C-CCeec-ccccccc-------------------------------
Confidence 589999999999999999999999999999998 2 22111 1100000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+....+.+..+...+.+.+.+.|+++++ ++|+++..+++ .+ .|.. .++ .++.+|.||+|+|.
T Consensus 61 --------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~--~~-~v~~---~~g--~~~~~d~lvlAtG~ 123 (323)
T 3f8d_A 61 --------YLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGD--EF-VVKT---KRK--GEFKADSVILGIGV 123 (323)
T ss_dssp --------STTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC----CE-EEEE---SSS--CEEEEEEEEECCCC
T ss_pred --------cCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCC--EE-EEEE---CCC--CEEEcCEEEECcCC
Confidence 00001144566777788888889999999 89999987642 32 2332 333 37899999999998
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
+.
T Consensus 124 ~~ 125 (323)
T 3f8d_A 124 KR 125 (323)
T ss_dssp EE
T ss_pred CC
Confidence 73
No 95
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.89 E-value=6.5e-09 Score=105.63 Aligned_cols=140 Identities=16% Similarity=0.148 Sum_probs=77.3
Q ss_pred ccEEEECCchHHHHHHHHHHH---CCCcEEEEeccCCCCCCc-cCCC-C----ccccchhhHHHHhhccCcc---cHHHH
Q 008503 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVEREDFSSGTS-SRST-K----LIHGGVRYLEKAVFNLDYG---QLKLV 139 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~---~G~~V~llEk~~~~~g~s-~~~~-~----~~~~g~~~~~~~~~~~~~~---~~~~~ 139 (563)
+||+|||||++|+++|+.|++ +|++|+|+||++..+|.. .+.. . .+..+..++.. ... .+...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~-----~~~~~~~~~~~ 76 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITC-----TPHYAKKHQRF 76 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEE-----CSSHHHHTHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEc-----CchHHHHHHHH
Confidence 599999999999999999999 999999999986433321 1110 0 11112122100 000 11122
Q ss_pred HHHHHHhhhc--ccCCc--------ceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEE
Q 008503 140 FHALEERKQA--KDRSL--------KGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIR 209 (563)
Q Consensus 140 ~~~l~~~~~~--~~~~~--------~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~ 209 (563)
.+.+...+.. ..... ...+....+ -..+...+.+. .|++|+++++|++|..+++ .+ .|..
T Consensus 77 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~l~~~l~~~---~g~~i~~~~~V~~i~~~~~--~~-~v~~- 146 (342)
T 3qj4_A 77 YDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQG---ISSIIKHYLKE---SGAEVYFRHRVTQINLRDD--KW-EVSK- 146 (342)
T ss_dssp HHHHHHTTSCEECCSCEETCCC--CCEEEECTTC---TTHHHHHHHHH---HTCEEESSCCEEEEEECSS--SE-EEEE-
T ss_pred HHHHHhCCCeecCchhhcceeccCCccceecCCC---HHHHHHHHHHh---cCCEEEeCCEEEEEEEcCC--EE-EEEE-
Confidence 2233222221 00000 001111111 12344444433 3899999999999998763 43 2433
Q ss_pred ECCCCcEEEEEeCeEEEccCc
Q 008503 210 NNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 210 d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+|. .+.+|.||+|+.+
T Consensus 147 --~~g~--~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 147 --QTGS--PEQFDLIVLTMPV 163 (342)
T ss_dssp --SSSC--CEEESEEEECSCH
T ss_pred --CCCC--EEEcCEEEECCCH
Confidence 3343 4789999999985
No 96
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.89 E-value=4.1e-09 Score=108.05 Aligned_cols=135 Identities=16% Similarity=0.234 Sum_probs=80.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCCCCCccCCC----CccccchhhHHHHhhccCcccHHHHHHHHHH
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSGTSSRST----KLIHGGVRYLEKAVFNLDYGQLKLVFHALEE 145 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~~g~s~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 145 (563)
++||+|||||++|+++|+.|++.|+ +|+|||+++ .+|. ..+. .++.... .... ..+ ..+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~-~~~~~~~~~~~~~~~--~~~~-~g~--~~~~~------- 69 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHS-FKHWPKSTRTITPSF--TSNG-FGM--PDMNA------- 69 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHH-HHTSCTTCBCSSCCC--CCGG-GTC--CCTTC-------
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCc-cccCcccccccCcch--hccc-CCc--hhhhh-------
Confidence 5899999999999999999999999 999999987 2221 1110 0000000 0000 000 00000
Q ss_pred hhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEE
Q 008503 146 RKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 225 (563)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI 225 (563)
........+......+.+..+...+...+.+.|++++++++|+++..+++ .+ .|.. .++ ++.+|.||
T Consensus 70 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~--~~-~v~~---~~g---~~~~d~vV 136 (369)
T 3d1c_A 70 ----ISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDA--YY-TIAT---TTE---TYHADYIF 136 (369)
T ss_dssp ----SSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS--SE-EEEE---SSC---CEEEEEEE
T ss_pred ----ccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCC--eE-EEEe---CCC---EEEeCEEE
Confidence 00000000001122345566667777778889999999999999987652 22 2332 223 58899999
Q ss_pred EccCcCh
Q 008503 226 NAAGPFC 232 (563)
Q Consensus 226 ~AtG~~s 232 (563)
+|+|.++
T Consensus 137 lAtG~~~ 143 (369)
T 3d1c_A 137 VATGDYN 143 (369)
T ss_dssp ECCCSTT
T ss_pred ECCCCCC
Confidence 9999976
No 97
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.89 E-value=6.4e-09 Score=112.57 Aligned_cols=67 Identities=18% Similarity=0.189 Sum_probs=51.0
Q ss_pred HHHHHHH-HCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeC-eEEEccCcC-hhhhhhhhc
Q 008503 173 GLALTAA-LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAK-VVVNAAGPF-CDSVRKLAD 240 (563)
Q Consensus 173 ~l~~~a~-~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~-~VI~AtG~~-s~~l~~~~g 240 (563)
.++..+. +.|++|++++.|++|..+++ ++++||.+.+..+|+...++|+ .||+|+|.+ +..++...|
T Consensus 213 a~l~~a~~~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SG 282 (546)
T 2jbv_A 213 SYIHPIVEQENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSG 282 (546)
T ss_dssp HHTGGGTTCTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcC
Confidence 4444443 57899999999999998754 6899999875333666789997 999999994 777765544
No 98
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.89 E-value=7.4e-09 Score=111.94 Aligned_cols=140 Identities=17% Similarity=0.134 Sum_probs=86.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+.++||+|||||++|+++|+.|++.|++|+|||+++..+|+...+. .+|.... .....+... +.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~---yPg~~~d------~~~~~y~~~---f~---- 70 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNR---YPGCRLD------TESYAYGYF---AL---- 70 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC---CTTCBCS------SCHHHHCHH---HH----
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCC---CCceeec------Cchhhcccc---cC----
Confidence 4568999999999999999999999999999999864444321110 1111000 000000000 00
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCC--EEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEE
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGA--AVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVN 226 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~--~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~ 226 (563)
+.....+.+........++...+...+.+.|+ .++++++|+++..+++ ...+.|.+ .+| .++.+|.||+
T Consensus 71 ---~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~---~~G--~~~~ad~lV~ 141 (545)
T 3uox_A 71 ---KGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN-DRLWEVTL---DNE--EVVTCRFLIS 141 (545)
T ss_dssp ---TTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG-GTEEEEEE---TTT--EEEEEEEEEE
T ss_pred ---cccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC-CCEEEEEE---CCC--CEEEeCEEEE
Confidence 00000111122234455666677777777787 8999999999987654 34555654 344 3789999999
Q ss_pred ccCcChh
Q 008503 227 AAGPFCD 233 (563)
Q Consensus 227 AtG~~s~ 233 (563)
|+|.++.
T Consensus 142 AtG~~s~ 148 (545)
T 3uox_A 142 ATGPLSA 148 (545)
T ss_dssp CCCSCBC
T ss_pred CcCCCCC
Confidence 9998653
No 99
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.88 E-value=7.3e-09 Score=112.20 Aligned_cols=139 Identities=18% Similarity=0.222 Sum_probs=83.1
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhH-HHHhhccCcccHHHHHHHHHHhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYL-EKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
..++||+|||||++|+++|+.|++.|++|+|||+++..+|+...+. .++.... ......+.+.. .. ...
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~---~pg~~~d~~~~~~~~~f~~-~~----~~~-- 83 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNR---YPGARCDIESIEYCYSFSE-EV----LQE-- 83 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCC---CTTCBCSSCTTTSSCCSCH-HH----HHH--
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccC---CCceeecccccccccccCh-hh----hhc--
Confidence 3468999999999999999999999999999999864444332110 1111000 00000000000 00 000
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCC--CEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEE
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAG--AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 225 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G--~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI 225 (563)
+..........++...+...+.+.+ .+++++++|+++..+++ ...+.|.+ .+|+ +++|+.||
T Consensus 84 ----------~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~---~~G~--~~~ad~vV 147 (542)
T 1w4x_A 84 ----------WNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEA-TNTWTVDT---NHGD--RIRARYLI 147 (542)
T ss_dssp ----------CCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETT-TTEEEEEE---TTCC--EEEEEEEE
T ss_pred ----------cCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCC-CCeEEEEE---CCCC--EEEeCEEE
Confidence 0001112233455555555566655 67999999999988754 34455554 3453 68999999
Q ss_pred EccCcChh
Q 008503 226 NAAGPFCD 233 (563)
Q Consensus 226 ~AtG~~s~ 233 (563)
+|+|.++.
T Consensus 148 ~AtG~~s~ 155 (542)
T 1w4x_A 148 MASGQLSV 155 (542)
T ss_dssp ECCCSCCC
T ss_pred ECcCCCCC
Confidence 99999864
No 100
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.88 E-value=4.6e-09 Score=111.40 Aligned_cols=150 Identities=13% Similarity=0.091 Sum_probs=82.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCC-----CcEEEEeccCCCCCCccCCCCccccchhh----HHHHhhc-cCcccHHHH
Q 008503 70 NPLDILVIGGGATGCGVALDAATRG-----LRVGLVEREDFSSGTSSRSTKLIHGGVRY----LEKAVFN-LDYGQLKLV 139 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G-----~~V~llEk~~~~~g~s~~~~~~~~~g~~~----~~~~~~~-~~~~~~~~~ 139 (563)
..|||+|||||++|+++|..|++.| ++|+|||+.+..+. ..+++..+... +...... .+...+. .
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~----~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~-~ 103 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW----HGNTLVSQSELQISFLKDLVSLRNPTSPYS-F 103 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS----SGGGCCSSCBCSSCTTSSSSTTTCTTCTTS-H
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC----cCCCCCCCCcCCcchhhccccccCCCCCCC-h
Confidence 4689999999999999999999999 99999999863221 11111111111 0000000 0000000 0
Q ss_pred HHHHHHhhhcccCCcceEEE-ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEEC-CCCcEE
Q 008503 140 FHALEERKQAKDRSLKGAVV-YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNN-LSGKEF 217 (563)
Q Consensus 140 ~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~-~~g~~~ 217 (563)
...+.+.... ..+. ..........+...+...+.+.|++++++++|+++..++++++.+.+.+... ..++..
T Consensus 104 ~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~ 177 (463)
T 3s5w_A 104 VNYLHKHDRL------VDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEEL 177 (463)
T ss_dssp HHHHHHTTCH------HHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEE
T ss_pred hHhhhhcCce------eecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceE
Confidence 0111111100 0000 0001112345555666666677999999999999987632135554444321 234445
Q ss_pred EEEeCeEEEccCc
Q 008503 218 DTYAKVVVNAAGP 230 (563)
Q Consensus 218 ~i~A~~VI~AtG~ 230 (563)
++.+|.||+|||.
T Consensus 178 ~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 178 VRTTRALVVSPGG 190 (463)
T ss_dssp EEEESEEEECCCC
T ss_pred EEEeCEEEECCCC
Confidence 8999999999997
No 101
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.87 E-value=1e-09 Score=118.50 Aligned_cols=67 Identities=21% Similarity=0.166 Sum_probs=49.1
Q ss_pred HHHHHHHCCCEEEcCcEEEEEEEcCC-CCcEEEEEEEECCCCcEEEE---EeCeEEEccCcC-hhhhhhhhcC
Q 008503 174 LALTAALAGAAVLNHAEVISLIKDEA-SNRIIGARIRNNLSGKEFDT---YAKVVVNAAGPF-CDSVRKLADQ 241 (563)
Q Consensus 174 l~~~a~~~G~~i~~~~~v~~l~~~~~-~g~v~gv~~~d~~~g~~~~i---~A~~VI~AtG~~-s~~l~~~~g~ 241 (563)
+...+.+.|++|++++.|++|..+++ +++++||.+.+ .+|+...+ .++.||+|+|++ +..++...|.
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~-~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGi 271 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRD-SNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGV 271 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEEC-TTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTE
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEe-CCCceEEEEeccCCEEEEcCcccCCHHHHHHcCC
Confidence 33445568999999999999998752 14899999875 35554455 568999999997 5666555543
No 102
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.87 E-value=1.2e-08 Score=111.91 Aligned_cols=61 Identities=16% Similarity=0.214 Sum_probs=47.6
Q ss_pred CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcCh-hhhhhhhcC
Q 008503 181 AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC-DSVRKLADQ 241 (563)
Q Consensus 181 ~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s-~~l~~~~g~ 241 (563)
.|++|++++.|++|..++++++++||.+.+..+|+..++.|+.||+|+|... ..++...|.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgi 334 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGF 334 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTS
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCC
Confidence 3799999999999998753258999999875577777899999999999764 334444443
No 103
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.86 E-value=4.3e-09 Score=105.35 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=74.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..|||+|||||++|+++|+.|+++|++|+|+|+...++... + |.+.. .....
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~--~-G~~~~-----~~~i~-------------------- 54 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAA--G-GQLTT-----TTIIE-------------------- 54 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCT--T-CGGGG-----SSEEC--------------------
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCccc--C-CCcCC-----hHHhh--------------------
Confidence 35999999999999999999999999999999985422111 1 11110 00000
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+.+.+ .-.+.+.++...+.+.+.+.+.++...+ |.....+.+ ... +.. .+ ..++.++.||+|||
T Consensus 55 ~~~g~-------~~~i~~~~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~--~~~-~~~---~~--~~~~~~~~liiATG 118 (314)
T 4a5l_A 55 NFPGF-------PNGIDGNELMMNMRTQSEKYGTTIITET-IDHVDFSTQ--PFK-LFT---EE--GKEVLTKSVIIATG 118 (314)
T ss_dssp CSTTC-------TTCEEHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSS--SEE-EEE---TT--CCEEEEEEEEECCC
T ss_pred hccCC-------cccCCHHHHHHHHHHHHhhcCcEEEEeE-EEEeecCCC--ceE-EEE---CC--CeEEEEeEEEEccc
Confidence 00000 1124566777778888888999988764 555544432 221 211 22 25799999999999
Q ss_pred cC
Q 008503 230 PF 231 (563)
Q Consensus 230 ~~ 231 (563)
..
T Consensus 119 ~~ 120 (314)
T 4a5l_A 119 AT 120 (314)
T ss_dssp EE
T ss_pred cc
Confidence 73
No 104
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.86 E-value=1.2e-08 Score=110.08 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=44.9
Q ss_pred HCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC-hhhhhhhhc
Q 008503 180 LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF-CDSVRKLAD 240 (563)
Q Consensus 180 ~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~-s~~l~~~~g 240 (563)
..+.+++.++.|.++..++ ++++||.+.+ .+....+.|+.||+|+|+. +..|+...|
T Consensus 223 r~nl~v~~~~~v~~i~~~~--~~a~gv~~~~--~~~~~~~~a~~VILsAGai~SP~LLl~SG 280 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG--NQVRSLEVVG--RQGSAEVFADQIVLCAGALESPALLMRSG 280 (526)
T ss_dssp CTTEEEECSCEEEEEEEET--TEEEEEEEEE--TTEEEEEEEEEEEECSHHHHHHHHHHHTT
T ss_pred CCCeEEEeCCEEEEEEecC--CeEEEEEEEe--cCceEEEeecceEEcccccCCcchhhhcc
Confidence 4578999999999999886 6899998876 3445678999999999975 556655444
No 105
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.84 E-value=1.3e-08 Score=101.59 Aligned_cols=115 Identities=20% Similarity=0.332 Sum_probs=76.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
+|||+|||||++|+++|+.|+++|++|+|||+. . +|...... +..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~-~-gG~~~~~~-----~~~---------------------------- 45 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER-F-GGQILDTV-----DIE---------------------------- 45 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS-T-TGGGGGCC-----EEC----------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC-C-Cceecccc-----ccc----------------------------
Confidence 489999999999999999999999999999864 1 22111000 000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+ +.....++..+...+.+.+.+.|++++++++|+.+..+.+.+..+.|.+ .++ .++.++.||+|+|.
T Consensus 46 --~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~---~~g--~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 46 --NY-----ISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIET---ASG--AVLKARSIIVATGA 113 (310)
T ss_dssp --CB-----TTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEE---TTS--CEEEEEEEEECCCE
T ss_pred --cc-----cCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEE---CCC--CEEEeCEEEECcCC
Confidence 00 0001133456666777777888999999999999976432122334443 344 36899999999998
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
+.
T Consensus 114 ~~ 115 (310)
T 1fl2_A 114 KW 115 (310)
T ss_dssp EE
T ss_pred Cc
Confidence 64
No 106
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.83 E-value=2.3e-08 Score=98.93 Aligned_cols=110 Identities=15% Similarity=0.096 Sum_probs=74.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.+||+|||||++|+++|+.|+++|++|+|+|+++..........++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~---------------------------------- 47 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGF---------------------------------- 47 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSS----------------------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCC----------------------------------
Confidence 3899999999999999999999999999999975322111100000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHC-CCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~-G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+......+..+...+.+.+.+. +++++. ++|+.+..+++ . +.|.+ .++ .++.+|.||+|+|
T Consensus 48 ---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~--~-~~v~~---~~g--~~~~~d~vviAtG 109 (297)
T 3fbs_A 48 ---------LGQDGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKGSFG--E-FIVEI---DGG--RRETAGRLILAMG 109 (297)
T ss_dssp ---------TTCTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEEETT--E-EEEEE---TTS--CEEEEEEEEECCC
T ss_pred ---------cCCCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEEcCC--e-EEEEE---CCC--CEEEcCEEEECCC
Confidence 0011234556666777777766 677765 58999987753 2 33433 334 3699999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
...
T Consensus 110 ~~~ 112 (297)
T 3fbs_A 110 VTD 112 (297)
T ss_dssp CEE
T ss_pred CCC
Confidence 854
No 107
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.83 E-value=1.7e-08 Score=101.31 Aligned_cols=112 Identities=21% Similarity=0.267 Sum_probs=76.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
.++||+|||||++|+++|+.|+++|++|+|||+..++ |....... ++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~g-g~~~~~~~-~~------------------------------- 61 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAG-GLTAEAPL-VE------------------------------- 61 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTT-GGGGGCSC-BC-------------------------------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC-ccccccch-hh-------------------------------
Confidence 4589999999999999999999999999999996432 22111100 00
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
..+.+ ..+++..+...+.+.+.+.|+++++ .+|+.+..++ +.+ .|.. ++. ++.+|.||+|+|
T Consensus 62 ~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~-~v~~----~~~--~~~~~~li~AtG 123 (319)
T 3cty_A 62 NYLGF--------KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQ--GGF-DIET----NDD--TYHAKYVIITTG 123 (319)
T ss_dssp CBTTB--------SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEET--TEE-EEEE----SSS--EEEEEEEEECCC
T ss_pred hcCCC--------cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CEE-EEEE----CCC--EEEeCEEEECCC
Confidence 00000 1234455666777778888999988 7899998764 222 2322 232 689999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
.++
T Consensus 124 ~~~ 126 (319)
T 3cty_A 124 TTH 126 (319)
T ss_dssp EEE
T ss_pred CCc
Confidence 864
No 108
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.83 E-value=4e-09 Score=106.59 Aligned_cols=115 Identities=15% Similarity=0.115 Sum_probs=77.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc----CCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHH
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE----DFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEE 145 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~----~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 145 (563)
..+||+|||||++|+++|+.|++.|++|+|||+. ...+|. +. +... ..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-------~~----~~~~-~~---------------- 58 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ-------LT----TTTD-VE---------------- 58 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-------GG----GCSE-EC----------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce-------ee----eccc-cc----------------
Confidence 4589999999999999999999999999999982 111111 00 0000 00
Q ss_pred hhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEE
Q 008503 146 RKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 225 (563)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI 225 (563)
..+.+ ...+++..+...+.+.+.+.|+++++++ |+.+..++ +.+ .|.+ ++ ..++++.||
T Consensus 59 ----~~~~~-------~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~-~v~~----~~--~~~~~~~vv 117 (333)
T 1vdc_A 59 ----NFPGF-------PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSS--KPF-KLFT----DS--KAILADAVI 117 (333)
T ss_dssp ----CSTTC-------TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSS--SSE-EEEC----SS--EEEEEEEEE
T ss_pred ----cCCCC-------ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEE-EEEE----CC--cEEEcCEEE
Confidence 00000 1124556777778888888999999987 88887654 232 2322 23 479999999
Q ss_pred EccCcChh
Q 008503 226 NAAGPFCD 233 (563)
Q Consensus 226 ~AtG~~s~ 233 (563)
+|+|.++.
T Consensus 118 ~A~G~~~~ 125 (333)
T 1vdc_A 118 LAIGAVAK 125 (333)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCcC
Confidence 99999753
No 109
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.82 E-value=5.8e-08 Score=97.29 Aligned_cols=63 Identities=13% Similarity=0.039 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCC-CcEEEEEeCeEEEccCcCh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLS-GKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~-g~~~~i~A~~VI~AtG~~s 232 (563)
..+...+.+.+.+.|++++++++|+++..++ +++.+|.+.+..+ |+..++.+|.||+|+|...
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 3455566677788999999999999998764 5788888865323 5446799999999999644
No 110
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.82 E-value=5.2e-09 Score=112.34 Aligned_cols=42 Identities=31% Similarity=0.468 Sum_probs=36.8
Q ss_pred CCCCccEEEECCchHHHHHHHHHHH-CCCcEEEEeccCCCCCC
Q 008503 68 NSNPLDILVIGGGATGCGVALDAAT-RGLRVGLVEREDFSSGT 109 (563)
Q Consensus 68 ~~~~~DVvIIGaGiaG~~~A~~la~-~G~~V~llEk~~~~~g~ 109 (563)
+..++||||||||++|+++|+.|++ .|++|+|+|+++..+|.
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 3457999999999999999999998 49999999999866663
No 111
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.79 E-value=2.3e-07 Score=98.53 Aligned_cols=38 Identities=29% Similarity=0.446 Sum_probs=34.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCC--CcEEEEeccCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRG--LRVGLVEREDFSSG 108 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~~~~~g 108 (563)
.+||+|||||++|+++|+.|+++| ++|+|+|+++..+|
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 589999999999999999999999 99999999865444
No 112
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.79 E-value=1.9e-08 Score=101.29 Aligned_cols=115 Identities=20% Similarity=0.176 Sum_probs=77.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..+||+|||||++|+++|+.|+++|++|+|||+..+ +|... +...++.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-gg~~~-~~~~~~~------------------------------ 54 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMP-GGQIA-WSEEVEN------------------------------ 54 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGGGG-GCSCBCC------------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCC-Ccccc-ccccccc------------------------------
Confidence 358999999999999999999999999999999843 22211 1100000
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEc--CCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKD--EASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~--~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
.+.+ ...+....+...+.+.+.+.|+++++ .+|+++..+ ++ ..+.|... ++. ++.+|.||+|
T Consensus 55 -~~~~-------~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~--~~~~v~~~---~g~--~~~~~~vv~A 118 (325)
T 2q7v_A 55 -FPGF-------PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSH--PYPFTVRG---YNG--EYRAKAVILA 118 (325)
T ss_dssp -STTC-------SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSS--SCCEEEEE---SSC--EEEEEEEEEC
T ss_pred -CCCC-------CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCC--ceEEEEEC---CCC--EEEeCEEEEC
Confidence 0000 00134456666777788889999987 689998876 32 21233332 343 6899999999
Q ss_pred cCcCh
Q 008503 228 AGPFC 232 (563)
Q Consensus 228 tG~~s 232 (563)
+|.+.
T Consensus 119 tG~~~ 123 (325)
T 2q7v_A 119 TGADP 123 (325)
T ss_dssp CCEEE
T ss_pred cCCCc
Confidence 99854
No 113
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.79 E-value=3.2e-08 Score=104.64 Aligned_cols=61 Identities=15% Similarity=0.187 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcC-CCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDE-ASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 235 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~-~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l 235 (563)
..+..+|.+.+++.|++++++++|++|..+. + +++++|.. +| .++.||.||+|+|.|++.+
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~-~~~~~V~~----~g--~~~~ad~VV~a~~~~~~~l 303 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT-GKFEGVKT----KL--GTFKAPLVIADPTYFPEKC 303 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTT-TEEEEEEE----TT--EEEECSCEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCC-CeEEEEEE----CC--eEEECCEEEECCCccchhh
Confidence 4788899999999999999999999998872 2 67777753 23 4789999999999998755
No 114
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.78 E-value=1.7e-08 Score=107.45 Aligned_cols=56 Identities=18% Similarity=0.076 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcCh
Q 008503 169 RLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 169 ~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s 232 (563)
.+...|.+.+.+.|++|+++++|++|..+++ .++.|.. ++ .++.||.||+|++++.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~--~~~~v~~----~~--~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAE--GRWKVSL----RD--SSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGG--GCEEEEC----SS--CEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC--ceEEEEE----CC--eEEEcCEEEECCCHHH
Confidence 5778888888889999999999999988753 4344532 23 3699999999999865
No 115
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.76 E-value=6e-08 Score=104.42 Aligned_cols=118 Identities=19% Similarity=0.322 Sum_probs=79.8
Q ss_pred CCCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 68 NSNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 68 ~~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
....+||+|||||++|+++|+.|++.|++|+|+|+. + +|......++ .
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~-~-GG~~~~~~~~-----~------------------------- 256 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER-F-GGQVLDTVDI-----E------------------------- 256 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-T-TGGGTTCSCB-----C-------------------------
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC-C-CCcccccccc-----c-------------------------
Confidence 356799999999999999999999999999999874 2 2221111000 0
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
.+. ......+..+...+.+.+.+.|++++++++|+.+..+.+.+..+.|.+ .+|. ++.++.||+|
T Consensus 257 -----~~~-----~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~---~~g~--~~~~d~vVlA 321 (521)
T 1hyu_A 257 -----NYI-----SVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIET---ASGA--VLKARSIIIA 321 (521)
T ss_dssp -----CBT-----TBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEE---TTSC--EEEEEEEEEC
T ss_pred -----ccC-----CCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEE---CCCC--EEEcCEEEEC
Confidence 000 000134456666777778889999999999999975421122234443 3443 6899999999
Q ss_pred cCcCh
Q 008503 228 AGPFC 232 (563)
Q Consensus 228 tG~~s 232 (563)
||.+.
T Consensus 322 tG~~~ 326 (521)
T 1hyu_A 322 TGAKW 326 (521)
T ss_dssp CCEEE
T ss_pred CCCCc
Confidence 99864
No 116
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.75 E-value=4e-08 Score=106.50 Aligned_cols=68 Identities=15% Similarity=0.193 Sum_probs=49.9
Q ss_pred HHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcE--EEE-EeCeEEEccCcC-hhhhhhhhcCC
Q 008503 173 GLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKE--FDT-YAKVVVNAAGPF-CDSVRKLADQN 242 (563)
Q Consensus 173 ~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~--~~i-~A~~VI~AtG~~-s~~l~~~~g~~ 242 (563)
.+++.+.+ .|+++++++.|++|..++ ++++||.+.+..+|+. ..+ .+|.||+|+|.+ +..++...|..
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig 272 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIG 272 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBS
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCC
Confidence 45666665 589999999999999875 6899998865324542 233 779999999997 46666665654
No 117
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.75 E-value=3.1e-08 Score=98.92 Aligned_cols=113 Identities=21% Similarity=0.246 Sum_probs=76.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEE-EeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGL-VEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~l-lEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
..+||+|||||++|+++|+.|+++|++|+| +||..+ +|...... .++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~-gG~~~~~~-~~~~----------------------------- 51 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMP-GGQITSSS-EIEN----------------------------- 51 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSST-TGGGGGCS-CBCC-----------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCC-Cceeeeec-eecc-----------------------------
Confidence 468999999999999999999999999999 999543 22211110 0000
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
.+. ....+.+..+...+.+.+.+.|++++++ +|+++ .+++ .+-+.+.+ .++. ++.++.||+|+
T Consensus 52 --~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~-~~~~~v~~---~~~~--~~~~d~lvlAt 114 (315)
T 3r9u_A 52 --YPG-------VAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNS-DGSFTIKL---EGGK--TELAKAVIVCT 114 (315)
T ss_dssp --STT-------CCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECT-TSCEEEEE---TTSC--EEEEEEEEECC
T ss_pred --CCC-------CCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCC-CCcEEEEE---ecCC--EEEeCEEEEee
Confidence 000 0112345667777778888899999998 88888 6541 02222222 3443 89999999999
Q ss_pred Cc
Q 008503 229 GP 230 (563)
Q Consensus 229 G~ 230 (563)
|.
T Consensus 115 G~ 116 (315)
T 3r9u_A 115 GS 116 (315)
T ss_dssp CE
T ss_pred CC
Confidence 97
No 118
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.73 E-value=6.8e-08 Score=97.73 Aligned_cols=114 Identities=23% Similarity=0.237 Sum_probs=75.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
+..+||+|||||++|+++|+.|++.|++|+|||+..++ |....... .+ .
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~g-g~~~~~~~-~~----------------~------------- 60 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFG-GALMTTTD-VE----------------N------------- 60 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCS-CGGGSCSC-BC----------------C-------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC-Cceeccch-hh----------------h-------------
Confidence 45689999999999999999999999999999986432 21100000 00 0
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEE-EEEECCCCcEEEEEeCeEEEc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGA-RIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv-~~~d~~~g~~~~i~A~~VI~A 227 (563)
.+.+ ...+....+...+.+.+.+.|+++++++ |+++.. + +.+ .| .+ .++ .++.+|.||+|
T Consensus 61 --~~~~-------~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~-~v~~~---~~g--~~~~~d~lviA 121 (335)
T 2a87_A 61 --YPGF-------RNGITGPELMDEMREQALRFGADLRMED-VESVSL-H--GPL-KSVVT---ADG--QTHRARAVILA 121 (335)
T ss_dssp --STTC-------TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-S--SSS-EEEEE---TTS--CEEEEEEEEEC
T ss_pred --cCCC-------CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-C--CcE-EEEEe---CCC--CEEEeCEEEEC
Confidence 0000 0113445566677777788899999987 888876 2 221 22 22 334 36899999999
Q ss_pred cCcCh
Q 008503 228 AGPFC 232 (563)
Q Consensus 228 tG~~s 232 (563)
+|...
T Consensus 122 tG~~~ 126 (335)
T 2a87_A 122 MGAAA 126 (335)
T ss_dssp CCEEE
T ss_pred CCCCc
Confidence 99854
No 119
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.71 E-value=1.5e-07 Score=100.38 Aligned_cols=58 Identities=21% Similarity=0.170 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~ 233 (563)
..+...+.+.+++.|++++++++|+++..++ +.+ .|.+ .+| .++.+|.||+|+|...+
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~---~~g--~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVL---TNG--QTICADRVMLATGRVPN 289 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEE---TTS--CEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEE---CCC--cEEEcCEEEEeeCCCcC
Confidence 3566677777888999999999999998765 344 4444 344 37899999999997543
No 120
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.70 E-value=1.6e-07 Score=100.72 Aligned_cols=67 Identities=10% Similarity=0.126 Sum_probs=50.2
Q ss_pred HHHHHHHHCC-CEEEcCcEEEEEEEcCCCCcEEEEEEEECCCC---cEEEEEeCeEEEccCcC-hhhhhhhhc
Q 008503 173 GLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSG---KEFDTYAKVVVNAAGPF-CDSVRKLAD 240 (563)
Q Consensus 173 ~l~~~a~~~G-~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g---~~~~i~A~~VI~AtG~~-s~~l~~~~g 240 (563)
.++..+.+.| ++|++++.|++|..++++++++||.+.+ .+| +..+++|+.||+|+|++ +..++...|
T Consensus 226 ~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 226 TYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKD-TDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp THHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEEC-TTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 4455666665 9999999999999875424799998875 344 44679999999999998 555554444
No 121
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.69 E-value=1.7e-07 Score=100.10 Aligned_cols=62 Identities=18% Similarity=0.096 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcCh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s 232 (563)
..+...+.+.+++.|++++++++|.++..++ +.+ .|.+.+..+|+..++.+|.||+|+|...
T Consensus 239 ~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 239 GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG--DGA-KVTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEE-EEEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCeEEEEEEeC--CEE-EEEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 3455666777788999999999999998765 233 4666553335446899999999999643
No 122
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.69 E-value=4.4e-08 Score=102.71 Aligned_cols=38 Identities=34% Similarity=0.514 Sum_probs=34.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
|||+|||||++|+++|+.|+++|++|+|||+++..+|.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCe
Confidence 79999999999999999999999999999997644443
No 123
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.67 E-value=1.4e-07 Score=102.98 Aligned_cols=63 Identities=16% Similarity=0.210 Sum_probs=48.1
Q ss_pred HHHCCCEEEcCcEEEEEEEcCCC--CcEEEEEEEECCCCcEEEEEe-CeEEEccCcC-hhhhhhhhcC
Q 008503 178 AALAGAAVLNHAEVISLIKDEAS--NRIIGARIRNNLSGKEFDTYA-KVVVNAAGPF-CDSVRKLADQ 241 (563)
Q Consensus 178 a~~~G~~i~~~~~v~~l~~~~~~--g~v~gv~~~d~~~g~~~~i~A-~~VI~AtG~~-s~~l~~~~g~ 241 (563)
+.+.|++|++++.|++|..++++ ++++||.+.+ .+|+...++| |.||+|+|.+ +..++...|.
T Consensus 241 ~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~-~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGI 307 (587)
T 1gpe_A 241 YQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGT-NKAVNFDVFAKHEVLLAAGSAISPLILEYSGI 307 (587)
T ss_dssp TTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEE-ETTEEEEEEEEEEEEECSCTTTHHHHHHHTTE
T ss_pred hcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEe-CCCcEEEEEecccEEEccCCCCCHHHHHhCCC
Confidence 34568999999999999876421 4899999875 4666678999 8999999985 5556555443
No 124
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.64 E-value=2.4e-07 Score=98.79 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
..+...+.+.+++.|+++++++.|.++..+++ +.+ .|.+.+..+++..++.+|.||+|+|..
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDD-GKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTT-SCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 44566677778889999999999999987653 444 466666444555689999999999963
No 125
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.60 E-value=2.9e-07 Score=97.57 Aligned_cols=58 Identities=22% Similarity=0.205 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEE-EEECCCCcEEEEEeCeEEEccCcChh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGAR-IRNNLSGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~-~~d~~~g~~~~i~A~~VI~AtG~~s~ 233 (563)
..+...+.+.+++.|++++++++|.++..+++ +. ..|. + .+| . +.+|.||+|+|...+
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~---~~g--~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADAD-GR-RVATTM---KHG--E-IVADQVMLALGRMPN 269 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SC-EEEEES---SSC--E-EEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CE-EEEEEc---CCC--e-EEeCEEEEeeCcccC
Confidence 35566777788899999999999999988653 33 2443 2 334 2 999999999997654
No 126
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.60 E-value=3.4e-07 Score=96.18 Aligned_cols=60 Identities=20% Similarity=0.296 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSV 235 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l 235 (563)
..+...|.+.+++.|++++++++|++|..++ +++++|.. +| .++.||.||+|+|.++..+
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~----~g--~~~~ad~VV~a~~~~~~~~ 293 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKS----EG--EVARCKQLICDPSYVPDRV 293 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEE----TT--EEEECSEEEECGGGCGGGE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEE----CC--eEEECCEEEECCCCCcccc
Confidence 5788899998999999999999999998875 67777652 34 4799999999999998654
No 127
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.59 E-value=6.5e-07 Score=95.26 Aligned_cols=64 Identities=14% Similarity=0.002 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcE--EEEEeCeEEEccCcCh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKE--FDTYAKVVVNAAGPFC 232 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~--~~i~A~~VI~AtG~~s 232 (563)
..+...+.+.+++.|+++++++.|+++..+++ +....|.+.+..+++. .++.+|.||+|+|...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSS-SEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 34556677778889999999999999987654 4222344433222332 5799999999999643
No 128
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.58 E-value=6.4e-08 Score=103.66 Aligned_cols=151 Identities=16% Similarity=0.166 Sum_probs=87.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCC--------------cEEEEeccC-CCCCCccCCCCccccchhhHHHHhhcc--
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGL--------------RVGLVERED-FSSGTSSRSTKLIHGGVRYLEKAVFNL-- 131 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~--------------~V~llEk~~-~~~g~s~~~~~~~~~g~~~~~~~~~~~-- 131 (563)
+.-|||||||+|++|+++|..|.+.|. .++.+|+.+ +. +..+++.+|.+..-..+.++
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~-----Wh~g~~~p~~~~q~~fl~Dlvt 111 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA-----WHSGMLVPGSKMQISFIKDLAT 111 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC-----SSGGGCCTTCBCSSCGGGSSST
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC-----cCCCCCCCCccccccchhhhcc
Confidence 345899999999999999999987543 566677764 32 12223222222111111111
Q ss_pred ---CcccHHHHHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCC-----cE
Q 008503 132 ---DYGQLKLVFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASN-----RI 203 (563)
Q Consensus 132 ---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g-----~v 203 (563)
+...+. ....+.+++.+.. ............++...|...|.+.+..++++++|+++...+.++ ..
T Consensus 112 l~~P~s~~s-f~~yl~~~~rl~~-----f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~ 185 (501)
T 4b63_A 112 LRDPRSSFT-FLNYLHQKGRLIH-----FTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDF 185 (501)
T ss_dssp TTCTTCTTS-HHHHHHHHTCHHH-----HHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCE
T ss_pred ccCCCCccc-hHHHHHHhCCccC-----CccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccce
Confidence 000110 1122332222100 000001112234566667777777777899999999998754311 36
Q ss_pred EEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 204 IGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 204 ~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
|.|++.+..+++..++.|+.||+|+|.
T Consensus 186 ~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 186 FTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred EEEEEecCCCceEEEEEeCEEEECcCC
Confidence 788888877788788999999999995
No 129
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.56 E-value=2.3e-07 Score=99.40 Aligned_cols=67 Identities=16% Similarity=0.067 Sum_probs=49.6
Q ss_pred HHHHHHHHCC-CEEEcCcEEEEEEEcCCCCcEEEEEEEECCCC---cEEEEEeCeEEEccCcC-hhhhhhhhc
Q 008503 173 GLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSG---KEFDTYAKVVVNAAGPF-CDSVRKLAD 240 (563)
Q Consensus 173 ~l~~~a~~~G-~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g---~~~~i~A~~VI~AtG~~-s~~l~~~~g 240 (563)
.++..+.+.| ++|++++.|++|..++++.+++||.+.+ .+| +..+++|+.||+|+|++ +..++...|
T Consensus 231 ~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~-~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~~Sg 302 (507)
T 1coy_A 231 TYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQID-EQGNVVATKVVTADRVFFAAGSVGTSKLLVSMK 302 (507)
T ss_dssp THHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEEC-TTSCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeC-CCCcccccEEEEeCEEEEccCccCCHHHHHhcc
Confidence 4555566664 9999999999999876413799998864 244 24689999999999998 666655444
No 130
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.55 E-value=4.2e-08 Score=101.24 Aligned_cols=131 Identities=17% Similarity=0.042 Sum_probs=77.1
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHH-HHHhhh
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHA-LEERKQ 148 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-l~~~~~ 148 (563)
.||+|||||++|+++|+.|+++ |++|+|+||.+... ..+....+...+.+.... .....+. +.....
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~-~~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 70 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE-VLGWGVVLPGRPGQHPAN---------PLSYLDAPERLNPQ 70 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC-CCCSEEEEESCTTTCTTC---------GGGGSSCGGGGCCE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC-cceeEEEeCcHHHHhhcC---------cchhhhhhHHHhhc
Confidence 3899999999999999999999 99999999985321 111111111111110000 0000000 000000
Q ss_pred c------ccCCcceEEE----ecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEE
Q 008503 149 A------KDRSLKGAVV----YYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFD 218 (563)
Q Consensus 149 ~------~~~~~~~~~~----~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~ 218 (563)
. ...+. .+. .....++...+...|.+.+.+.|++++++++|+++... . .
T Consensus 71 ~~~~~~~~~~g~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--------------~-----~ 129 (381)
T 3c4a_A 71 FLEDFKLVHHNE--PSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL--------------P-----L 129 (381)
T ss_dssp EECCEEEEESSS--EEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC--------------C-----G
T ss_pred cccceEEEeCCe--eEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc--------------c-----c
Confidence 0 00000 000 00123667788899999999999999999999876321 0 2
Q ss_pred EEeCeEEEccCcChh
Q 008503 219 TYAKVVVNAAGPFCD 233 (563)
Q Consensus 219 i~A~~VI~AtG~~s~ 233 (563)
++||.||.|+|.+|.
T Consensus 130 ~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 130 ADYDLVVLANGVNHK 144 (381)
T ss_dssp GGCSEEEECCGGGGG
T ss_pred ccCCEEEECCCCCch
Confidence 568999999999996
No 131
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.55 E-value=4.8e-08 Score=94.44 Aligned_cols=38 Identities=29% Similarity=0.441 Sum_probs=34.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
++||+|||||++|+++|+.|+++|++|+|+||.+..+|
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG 39 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGG 39 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 48999999999999999999999999999999875444
No 132
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.55 E-value=5e-07 Score=96.50 Aligned_cols=60 Identities=20% Similarity=0.093 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcCh
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s 232 (563)
..+...+.+.+++. +++++++.|.++..++ +.+. +.+.+ .+|+..++.+|.||+|+|...
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~-v~~~~-~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVE-VIYFD-KSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEE-EEEEC-TTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEE-EEEEe-CCCceEEEECCEEEEeeCCcc
Confidence 35555666666666 9999999999998765 3443 44432 255546899999999999643
No 133
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.55 E-value=2e-07 Score=98.53 Aligned_cols=115 Identities=15% Similarity=0.131 Sum_probs=71.6
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
+||+|||||++|+++|..|++. |++|+|||+++..... ..++.+... +
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~--------~~~~~~~~~--------------------g-- 50 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFL--------SCGIALYLG--------------------K-- 50 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBC--------GGGHHHHHT--------------------T--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcc--------cccchhhhc--------------------C--
Confidence 5899999999999999999998 9999999998632111 111110000 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+. .+++..+...+.+.+.+.|++++.+++|+.+..++ .. |.+.+..+++..++.++.||+|||
T Consensus 51 ---~~~--------~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~---v~v~~~~~g~~~~~~~d~lviAtG 114 (452)
T 2cdu_A 51 ---EIK--------NNDPRGLFYSSPEELSNLGANVQMRHQVTNVDPET--KT---IKVKDLITNEEKTEAYDKLIMTTG 114 (452)
T ss_dssp ---CBG--------GGCGGGGBSCCHHHHHHTTCEEEESEEEEEEEGGG--TE---EEEEETTTCCEEEEECSEEEECCC
T ss_pred ---Ccc--------cCCHHHhhhcCHHHHHHcCCEEEeCCEEEEEEcCC--CE---EEEEecCCCceEEEECCEEEEccC
Confidence 000 00011111112233456899999999999987654 23 444442334446799999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
...
T Consensus 115 s~p 117 (452)
T 2cdu_A 115 SKP 117 (452)
T ss_dssp EEE
T ss_pred CCc
Confidence 643
No 134
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.54 E-value=4e-07 Score=96.85 Aligned_cols=36 Identities=33% Similarity=0.581 Sum_probs=33.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
.+|||+|||||++|+++|+.|++.|++|+|||+++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 469999999999999999999999999999999863
No 135
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.53 E-value=2.2e-07 Score=98.68 Aligned_cols=117 Identities=16% Similarity=0.133 Sum_probs=63.6
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 71 PLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
..||+|||||++|+++|+.|+++ |++|+|||+++..+.. ..++.+...
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~--------~~gl~~~~~---------------------- 52 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG--------GCGIPYYVS---------------------- 52 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccc--------ccccchhhc----------------------
Confidence 36999999999999999999998 9999999998632110 011111000
Q ss_pred cccCCcceEEEecCceec--hHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEE
Q 008503 149 AKDRSLKGAVVYYDGQMN--DSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVN 226 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~--~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~ 226 (563)
+.+.... .+. +..+...+.......|++++++++|+.+..++ .. +.+.+..++....+.++.||+
T Consensus 53 -------g~~~~~~-~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~--~~---v~~~~~~~g~~~~~~~d~lvi 119 (472)
T 3iwa_A 53 -------GEVSNIE-SLQATPYNVVRDPEFFRINKDVEALVETRAHAIDRAA--HT---VEIENLRTGERRTLKYDKLVL 119 (472)
T ss_dssp ------------------------------------CEEECSEEEEEEETTT--TE---EEEEETTTCCEEEEECSEEEE
T ss_pred -------CCCCchH-HhccccchhccCHHHHhhhcCcEEEECCEEEEEECCC--CE---EEEeecCCCCEEEEECCEEEE
Confidence 0000000 000 00011111222235789999999999997664 22 344433346556899999999
Q ss_pred ccCc
Q 008503 227 AAGP 230 (563)
Q Consensus 227 AtG~ 230 (563)
|||.
T Consensus 120 AtG~ 123 (472)
T 3iwa_A 120 ALGS 123 (472)
T ss_dssp CCCE
T ss_pred eCCC
Confidence 9997
No 136
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.53 E-value=1.8e-07 Score=98.91 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=68.9
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
+||+|||||++|+++|+.|+++ |++|+|||+++..+..+ .+..+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~--------~~~~~~~~----------------------- 51 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLS--------GGLSAYFN----------------------- 51 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCC--------C------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccC--------ccchhhhc-----------------------
Confidence 5999999999999999999998 99999999986322111 11111000
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+... ++..+...+.+.+.+.|++++++++|+++..++ ..+ .+. . .+ ...++.++.||+|||
T Consensus 52 ------~~~~------~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~--~~v-~v~--~-~~-~~~~~~~d~lviAtG 112 (452)
T 3oc4_A 52 ------HTIN------ELHEARYITEEELRRQKIQLLLNREVVAMDVEN--QLI-AWT--R-KE-EQQWYSYDKLILATG 112 (452)
T ss_dssp ---------------------CCCCHHHHHHTTEEEECSCEEEEEETTT--TEE-EEE--E-TT-EEEEEECSEEEECCC
T ss_pred ------CCCC------CHHHhhcCCHHHHHHCCCEEEECCEEEEEECCC--CEE-EEE--e-cC-ceEEEEcCEEEECCC
Confidence 0000 000000012233456899999999999997764 232 232 1 22 346899999999999
Q ss_pred cC
Q 008503 230 PF 231 (563)
Q Consensus 230 ~~ 231 (563)
..
T Consensus 113 ~~ 114 (452)
T 3oc4_A 113 AS 114 (452)
T ss_dssp CC
T ss_pred cc
Confidence 83
No 137
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.52 E-value=2.8e-07 Score=100.76 Aligned_cols=115 Identities=20% Similarity=0.257 Sum_probs=74.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
+...||+|||||++|+++|+.|+++ |++|+|||+++..+ +...++.+...
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--------~~~~~lp~~~~-------------------- 85 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--------FANCGLPYYIG-------------------- 85 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--------BCGGGHHHHHT--------------------
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--------ccCCCCchhhc--------------------
Confidence 4467999999999999999999998 89999999986321 11111111100
Q ss_pred hhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEE
Q 008503 147 KQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVN 226 (563)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~ 226 (563)
. .+...... +...+...+.+.|++++++++|+++..++ .. +.+.+..++....+.+|.||+
T Consensus 86 -----g----~~~~~~~~-----~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~---v~v~~~~~g~~~~~~~d~lvi 146 (588)
T 3ics_A 86 -----G----VITERQKL-----LVQTVERMSKRFNLDIRVLSEVVKINKEE--KT---ITIKNVTTNETYNEAYDVLIL 146 (588)
T ss_dssp -----T----SSCCGGGG-----BSSCHHHHHHHTTCEEECSEEEEEEETTT--TE---EEEEETTTCCEEEEECSEEEE
T ss_pred -----C----cCCChHHh-----hccCHHHHHHhcCcEEEECCEEEEEECCC--CE---EEEeecCCCCEEEEeCCEEEE
Confidence 0 00000000 01122333456899999999999998764 23 344443355556899999999
Q ss_pred ccCc
Q 008503 227 AAGP 230 (563)
Q Consensus 227 AtG~ 230 (563)
|||.
T Consensus 147 AtG~ 150 (588)
T 3ics_A 147 SPGA 150 (588)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 9997
No 138
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.51 E-value=2.2e-07 Score=99.07 Aligned_cols=35 Identities=43% Similarity=0.738 Sum_probs=32.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
+|||+|||||++|+++|+.|++.|++|+|||+++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~ 40 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT 40 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 58999999999999999999999999999999753
No 139
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.50 E-value=1.9e-07 Score=98.53 Aligned_cols=108 Identities=23% Similarity=0.255 Sum_probs=65.3
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 71 PLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
.+||+|||||++|+++|+.|++. |++|+|||+.+..+... .++.+..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~--------~~~p~~~----------------------- 51 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP--------CGIPYVV----------------------- 51 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC--------cCCcccc-----------------------
Confidence 47999999999999999999998 89999999986332111 0110000
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHH-HHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALT-AALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
.+..++..+.....+. +.+.|++++++++|+.+..+. ..|. .++...++.+|.||+|
T Consensus 52 -------------~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~-----~~v~----~~~g~~~~~~d~lviA 109 (449)
T 3kd9_A 52 -------------EGLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGY-----VRVR----ENGGEKSYEWDYLVFA 109 (449)
T ss_dssp ---------------------------CTHHHHTTCEEETTCEEEEECSSE-----EEEE----CSSSEEEEECSEEEEC
T ss_pred -------------CCCCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecCC-----CEEE----ECCceEEEEcCEEEEC
Confidence 0000111111111222 256899999999999885432 1222 2333357999999999
Q ss_pred cCcC
Q 008503 228 AGPF 231 (563)
Q Consensus 228 tG~~ 231 (563)
||..
T Consensus 110 tG~~ 113 (449)
T 3kd9_A 110 NGAS 113 (449)
T ss_dssp CCEE
T ss_pred CCCC
Confidence 9963
No 140
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=3.1e-07 Score=97.47 Aligned_cols=40 Identities=33% Similarity=0.576 Sum_probs=35.4
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
+.+|||+|||||++|+++|+.|++.|++|+|||+++..+|
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGG 43 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 4579999999999999999999999999999999854333
No 141
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.49 E-value=1.3e-07 Score=99.89 Aligned_cols=113 Identities=14% Similarity=0.240 Sum_probs=70.5
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
+||+|||||++|+++|..|++. |++|+|||+++..+. ...++.+... +
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~--------~~~~~~~~~~--------------------~-- 50 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF--------LSAGMQLYLE--------------------G-- 50 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB--------CGGGHHHHHT--------------------T--
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc--------ccccchhhhc--------------------C--
Confidence 4899999999999999999998 999999999863211 0111110000 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.. .++..+...+.+.+.+.|++++.++.|+.+..++ .. |.+.+..+|+..++.+|.||+|||
T Consensus 51 ---~~----------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~---v~~~~~~~g~~~~~~~d~lviAtG 112 (447)
T 1nhp_A 51 ---KV----------KDVNSVRYMTGEKMESRGVNVFSNTEITAIQPKE--HQ---VTVKDLVSGEERVENYDKLIISPG 112 (447)
T ss_dssp ---SS----------CCGGGSBSCCHHHHHHTTCEEEETEEEEEEETTT--TE---EEEEETTTCCEEEEECSEEEECCC
T ss_pred ---cc----------CCHHHhhcCCHHHHHHCCCEEEECCEEEEEeCCC--CE---EEEEecCCCceEEEeCCEEEEcCC
Confidence 00 0000000011233446799999999999987654 23 444432235445689999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
...
T Consensus 113 ~~p 115 (447)
T 1nhp_A 113 AVP 115 (447)
T ss_dssp EEE
T ss_pred CCc
Confidence 743
No 142
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.48 E-value=1.1e-07 Score=99.17 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=69.7
Q ss_pred ccEEEECCchHHHHHHHHHHH---CCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 72 LDILVIGGGATGCGVALDAAT---RGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~---~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
.||+|||||++|+++|+.|++ .|++|+|||+++.......... ...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~--~~~----------------------------- 50 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPH--VAI----------------------------- 50 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCC--CCS-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhh--ccc-----------------------------
Confidence 389999999999999999999 8999999999862111100000 000
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
+..++..+...+.+.+.+.|++++.+ +|+.+..++ . .|.+.+ .++...++.+|.||+|+
T Consensus 51 --------------~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~--~---~V~~~~-g~~~~~~~~~d~lViAt 109 (409)
T 3h8l_A 51 --------------GVRDVDELKVDLSEALPEKGIQFQEG-TVEKIDAKS--S---MVYYTK-PDGSMAEEEYDYVIVGI 109 (409)
T ss_dssp --------------SCCCCCCEEEEHHHHTGGGTCEEEEC-EEEEEETTT--T---EEEEEC-TTSCEEEEECSEEEECC
T ss_pred --------------CCcCHHHHHHHHHHHHhhCCeEEEEe-eEEEEeCCC--C---EEEEcc-CCcccceeeCCEEEECC
Confidence 00000011112344455679999987 899887654 2 244544 33334579999999999
Q ss_pred CcCh
Q 008503 229 GPFC 232 (563)
Q Consensus 229 G~~s 232 (563)
|...
T Consensus 110 G~~~ 113 (409)
T 3h8l_A 110 GAHL 113 (409)
T ss_dssp CCEE
T ss_pred CCCc
Confidence 9843
No 143
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.47 E-value=1.1e-06 Score=94.58 Aligned_cols=36 Identities=33% Similarity=0.531 Sum_probs=33.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..+|||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 356999999999999999999999999999999974
No 144
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.46 E-value=1.1e-07 Score=99.68 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=32.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..+||+|||||++|+++|+.|+++|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 44799999999999999999999999999999985
No 145
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.46 E-value=2.4e-07 Score=98.35 Aligned_cols=38 Identities=26% Similarity=0.375 Sum_probs=34.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
+|||+|||||++|+++|+.|++.|++|+||||.+..+|
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG 41 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGG 41 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 59999999999999999999999999999997754333
No 146
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.45 E-value=4.5e-07 Score=96.09 Aligned_cols=34 Identities=35% Similarity=0.552 Sum_probs=32.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
+|||+|||||++|+++|+.|++.|++|+|||++.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 36 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY 36 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 4899999999999999999999999999999984
No 147
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.45 E-value=8.6e-07 Score=98.69 Aligned_cols=41 Identities=29% Similarity=0.399 Sum_probs=36.1
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
...+||+|||||++|+++|+.|+++|++|+|||+++..+|.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~ 429 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGR 429 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCE
Confidence 35689999999999999999999999999999998754443
No 148
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.45 E-value=2.1e-07 Score=99.08 Aligned_cols=113 Identities=17% Similarity=0.210 Sum_probs=69.6
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 71 PLDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
.+||+|||||++|+++|+.|++. |++|+|||+.+...+.. .++.+... .
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~--------~~~~~~~~---~------------------ 86 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQ--------CGLPYVIS---G------------------ 86 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCG--------GGHHHHHT---T------------------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCC--------CCcchhhc---C------------------
Confidence 46999999999999999999996 99999999986432111 11111000 0
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHH-HHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTA-ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a-~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
.. .++..+.....+.. ...|++++++++|+.+..++ .. |.+.+..+|+..++.+|.||+|
T Consensus 87 ----~~----------~~~~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~---v~v~~~~~g~~~~~~~d~lviA 147 (480)
T 3cgb_A 87 ----AI----------ASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEK--KI---VYAEHTKTKDVFEFSYDRLLIA 147 (480)
T ss_dssp ----SS----------SCGGGGBSSCHHHHHHTTCCEEESSEEEEEEETTT--TE---EEEEETTTCCEEEEECSEEEEC
T ss_pred ----Cc----------CCHHHhhhcCHHHHHhhcCCEEEeCCEEEEEECCC--CE---EEEEEcCCCceEEEEcCEEEEC
Confidence 00 00000000011222 34599999999999987654 23 3444322354447999999999
Q ss_pred cCcC
Q 008503 228 AGPF 231 (563)
Q Consensus 228 tG~~ 231 (563)
||..
T Consensus 148 tG~~ 151 (480)
T 3cgb_A 148 TGVR 151 (480)
T ss_dssp CCEE
T ss_pred CCCc
Confidence 9974
No 149
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.45 E-value=3.3e-07 Score=97.49 Aligned_cols=36 Identities=33% Similarity=0.581 Sum_probs=33.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
.+|||+|||||++|+++|+.|++.|++|+|||+++.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 39 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK 39 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 358999999999999999999999999999999653
No 150
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=1e-06 Score=93.16 Aligned_cols=34 Identities=35% Similarity=0.569 Sum_probs=32.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
+|||+|||||++|+++|..|++.|++|+|||++.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 36 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5899999999999999999999999999999984
No 151
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.43 E-value=4.6e-07 Score=95.08 Aligned_cols=108 Identities=18% Similarity=0.228 Sum_probs=68.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEeccCCCC-CCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVEREDFSS-GTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~~~~~-g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.+||+|||||++|+++|..|++.|+ +|+|||+.+... .....+..++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~---------------------------- 55 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAG---------------------------- 55 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTT----------------------------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCC----------------------------
Confidence 5899999999999999999999998 799999975211 100000000000
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
. ..+..+...+.+.+.+.|++++.+++|+.+..++ .. |.+ .+++ ++.+|.||+|
T Consensus 56 ---------~-------~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~---v~~---~~g~--~~~~d~lviA 109 (431)
T 1q1r_A 56 ---------K-------ATAESLYLRTPDAYAAQNIQLLGGTQVTAINRDR--QQ---VIL---SDGR--ALDYDRLVLA 109 (431)
T ss_dssp ---------C-------SCSGGGBSSCHHHHHHTTEEEECSCCEEEEETTT--TE---EEE---TTSC--EEECSEEEEC
T ss_pred ---------C-------CChHHhcccCHHHHHhCCCEEEeCCEEEEEECCC--CE---EEE---CCCC--EEECCEEEEc
Confidence 0 0000000011233456899999999999997653 22 333 3343 6899999999
Q ss_pred cCcCh
Q 008503 228 AGPFC 232 (563)
Q Consensus 228 tG~~s 232 (563)
||...
T Consensus 110 tG~~p 114 (431)
T 1q1r_A 110 TGGRP 114 (431)
T ss_dssp CCEEE
T ss_pred CCCCc
Confidence 99844
No 152
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.43 E-value=1.4e-06 Score=93.02 Aligned_cols=35 Identities=37% Similarity=0.621 Sum_probs=33.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
+.+|||+|||||++|+++|+.|++.|++|+||||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 46799999999999999999999999999999985
No 153
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.43 E-value=2.1e-06 Score=92.38 Aligned_cols=36 Identities=39% Similarity=0.542 Sum_probs=33.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
+.+|||+|||||++|..+|..+++.|++|+|||+..
T Consensus 40 ~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 40 TYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp CSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 347999999999999999999999999999999864
No 154
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.43 E-value=3.5e-07 Score=95.45 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=69.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCc--EEEEeccCCCCCC-ccCCCCccccchhhHHHHhhccCcccHHHHHHHHHH
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLR--VGLVEREDFSSGT-SSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEE 145 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~--V~llEk~~~~~g~-s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~ 145 (563)
...+||+|||||++|+++|+.|+++|++ |+|||+.+..... ..-+..++.+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~-------------------------- 60 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAR-------------------------- 60 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTT--------------------------
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcC--------------------------
Confidence 3568999999999999999999999988 9999998532111 0000000000
Q ss_pred hhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEE
Q 008503 146 RKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVV 225 (563)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI 225 (563)
...+..+.....+...+.|++++.+++|+.+..+. .. |.+ .++ ..+.++.+|
T Consensus 61 ------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~--~~---v~~---~~g--~~~~~d~lv 112 (415)
T 3lxd_A 61 ------------------EKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAA--HT---VKL---GDG--SAIEYGKLI 112 (415)
T ss_dssp ------------------SSCSGGGBSSCHHHHHHTTEEEEETCCEEEEETTT--TE---EEE---TTS--CEEEEEEEE
T ss_pred ------------------CCCHHHhccCCHHHHHHCCcEEEeCCEEEEEECCC--CE---EEE---CCC--CEEEeeEEE
Confidence 00000011111233456899999999999987653 22 222 344 378999999
Q ss_pred EccCcC
Q 008503 226 NAAGPF 231 (563)
Q Consensus 226 ~AtG~~ 231 (563)
+|||..
T Consensus 113 lAtG~~ 118 (415)
T 3lxd_A 113 WATGGD 118 (415)
T ss_dssp ECCCEE
T ss_pred EccCCc
Confidence 999963
No 155
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.42 E-value=6.7e-07 Score=94.85 Aligned_cols=36 Identities=36% Similarity=0.641 Sum_probs=33.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
.++||+|||||++|+++|+.|++.|++|+|||++.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~ 38 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTI 38 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSST
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 468999999999999999999999999999999854
No 156
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.42 E-value=1.6e-07 Score=100.32 Aligned_cols=113 Identities=17% Similarity=0.065 Sum_probs=70.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCC---CcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 70 NPLDILVIGGGATGCGVALDAATRG---LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G---~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
.++||+|||||++|+++|..|++.| ++|+|||+++..... ..++.+...
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~--------~~~~~~~~~-------------------- 85 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFL--------GAGMALWIG-------------------- 85 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBC--------GGGHHHHHT--------------------
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcc--------ccccchhhc--------------------
Confidence 3589999999999999999999988 999999998632111 111110000
Q ss_pred hhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEE
Q 008503 147 KQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVN 226 (563)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~ 226 (563)
... . ++..+...+.+.+.+.|++++.+++|+.+..++ .. |.+.. ++...++.+|.||+
T Consensus 86 ~~~--~-------------~~~~~~~~~~~~~~~~gv~v~~~~~v~~i~~~~--~~---v~v~~--~g~~~~~~~d~lvi 143 (490)
T 2bc0_A 86 EQI--A-------------GPEGLFYSDKEELESLGAKVYMESPVQSIDYDA--KT---VTALV--DGKNHVETYDKLIF 143 (490)
T ss_dssp TSS--S-------------CSGGGBSCCHHHHHHTTCEEETTCCEEEEETTT--TE---EEEEE--TTEEEEEECSEEEE
T ss_pred Ccc--C-------------CHHHhhhcCHHHHHhCCCEEEeCCEEEEEECCC--CE---EEEEe--CCcEEEEECCEEEE
Confidence 000 0 000000011233456899999999999987654 23 33321 33345799999999
Q ss_pred ccCcCh
Q 008503 227 AAGPFC 232 (563)
Q Consensus 227 AtG~~s 232 (563)
|||...
T Consensus 144 AtG~~p 149 (490)
T 2bc0_A 144 ATGSQP 149 (490)
T ss_dssp CCCEEE
T ss_pred CCCCCc
Confidence 999743
No 157
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.41 E-value=5.6e-07 Score=97.86 Aligned_cols=113 Identities=20% Similarity=0.229 Sum_probs=71.3
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
.||+|||||++|+++|+.|+++ |++|+|+|+++..+. ...++.+...
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~--------~~~~l~~~~~----------------------- 50 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF--------ANCGLPYHIS----------------------- 50 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB--------CGGGHHHHHT-----------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc--------cccCchHHhc-----------------------
Confidence 4899999999999999999998 899999999864221 1111111100
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.. .......+ ...+...+.+.|++++++++|+++..+. .. +.+.+..++...++.+|.||+|||
T Consensus 51 --~~----~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~V~~id~~~--~~---v~~~~~~~g~~~~~~~d~lviAtG 114 (565)
T 3ntd_A 51 --GE----IAQRSALV-----LQTPESFKARFNVEVRVKHEVVAIDRAA--KL---VTVRRLLDGSEYQESYDTLLLSPG 114 (565)
T ss_dssp --SS----SCCGGGGB-----CCCHHHHHHHHCCEEETTEEEEEEETTT--TE---EEEEETTTCCEEEEECSEEEECCC
T ss_pred --CC----cCChHHhh-----ccCHHHHHHhcCcEEEECCEEEEEECCC--CE---EEEEecCCCCeEEEECCEEEECCC
Confidence 00 00000000 0011222335799999999999997664 22 344443346556899999999999
Q ss_pred cC
Q 008503 230 PF 231 (563)
Q Consensus 230 ~~ 231 (563)
..
T Consensus 115 ~~ 116 (565)
T 3ntd_A 115 AA 116 (565)
T ss_dssp EE
T ss_pred CC
Confidence 83
No 158
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.41 E-value=4e-07 Score=96.95 Aligned_cols=35 Identities=43% Similarity=0.576 Sum_probs=33.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.+|||+|||||++|+++|+.|++.|++|+|||++.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46999999999999999999999999999999985
No 159
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.40 E-value=9e-07 Score=93.89 Aligned_cols=38 Identities=37% Similarity=0.679 Sum_probs=34.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
+|||+|||||++|+++|+.|++.|++|+|||+++..+|
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG 39 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGG 39 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 58999999999999999999999999999999854333
No 160
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.40 E-value=6.1e-07 Score=100.46 Aligned_cols=39 Identities=26% Similarity=0.491 Sum_probs=35.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..+|
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 358999999999999999999999999999999864444
No 161
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.2e-06 Score=93.59 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=32.6
Q ss_pred CccEEEECCchHHHHHHHHHHHC---CCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATR---GLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~---G~~V~llEk~~ 104 (563)
+|||+|||||++|+++|+.|+++ |++|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 48999999999999999999999 99999999987
No 162
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.35 E-value=1e-06 Score=90.98 Aligned_cols=107 Identities=13% Similarity=0.159 Sum_probs=69.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
+...|+|||||++|+++|..|...+.+|+|||+.+..... .+.+ ... +.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~--------~~~l---~~~---------------l~----- 56 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY--------RPRL---NEI---------------IA----- 56 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC--------GGGH---HHH---------------HH-----
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc--------cChh---hHH---------------Hc-----
Confidence 4578999999999999999998889999999998632110 0110 000 00
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+...+..+.....+.+.+.|++++++++|+++..++ .. |.+ .+++ ++.+|.||+|||
T Consensus 57 -------------g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~--~~---v~~---~~g~--~~~yd~lvlAtG 113 (385)
T 3klj_A 57 -------------KNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNN--KL---VTL---KSGE--KIKYEKLIIASG 113 (385)
T ss_dssp -------------SCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTT--TE---EEE---TTSC--EEECSEEEECCC
T ss_pred -------------CCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCC--CE---EEE---CCCC--EEECCEEEEecC
Confidence 000011111122333457899999999999998664 22 333 3443 789999999999
Q ss_pred c
Q 008503 230 P 230 (563)
Q Consensus 230 ~ 230 (563)
.
T Consensus 114 ~ 114 (385)
T 3klj_A 114 S 114 (385)
T ss_dssp E
T ss_pred C
Confidence 7
No 163
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.35 E-value=1.1e-06 Score=93.41 Aligned_cols=39 Identities=31% Similarity=0.474 Sum_probs=34.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
.+|||+|||||++|+++|+.|++.|++|+|||+++..+|
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGG 43 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCC
Confidence 458999999999999999999999999999999854333
No 164
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.33 E-value=1.2e-06 Score=93.53 Aligned_cols=33 Identities=30% Similarity=0.557 Sum_probs=31.1
Q ss_pred CCccEEEECCchHHHHHHHHHHH-CCCcEEEEec
Q 008503 70 NPLDILVIGGGATGCGVALDAAT-RGLRVGLVER 102 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~-~G~~V~llEk 102 (563)
.+|||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 36899999999999999999999 9999999993
No 165
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.33 E-value=1.4e-06 Score=92.34 Aligned_cols=34 Identities=41% Similarity=0.597 Sum_probs=32.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
++||+|||||++|+++|..|++.|++|+|||+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999987
No 166
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=3.8e-07 Score=93.55 Aligned_cols=104 Identities=14% Similarity=0.129 Sum_probs=65.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-||+|||||++|+++|..|++.| +|+|||+++.... +..++ ... +.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~----~~~~l-------~~~---------------~~------- 54 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYY----SKPML-------SHY---------------IA------- 54 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCC----CSTTH-------HHH---------------HT-------
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCcc----ccchh-------HHH---------------Hh-------
Confidence 59999999999999999999999 9999999864211 10000 000 00
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
+.+++..+.....+.+.+.|++++.+++|+.+..+. ..| . . ++ .++.+|.||+|||..
T Consensus 55 -----------g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~~~--~~V---~-~---~g--~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 55 -----------GFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGR--KVV---I-T---EK--GEVPYDTLVLATGAR 112 (367)
T ss_dssp -----------TSSCGGGGCSSCHHHHHHHTEEEECSCCEEEEETTT--TEE---E-E---SS--CEEECSEEEECCCEE
T ss_pred -----------CCCCHHHhccCCHHHHHhCCcEEEECCEEEEEECCC--CEE---E-E---CC--cEEECCEEEECCCCC
Confidence 000000000011223346799999999999887553 233 2 2 23 368999999999963
No 167
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.28 E-value=2.1e-06 Score=90.71 Aligned_cols=35 Identities=46% Similarity=0.716 Sum_probs=32.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
+|||+|||||++|+++|..|++.|++|+|||+++.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 35 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKA 35 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 48999999999999999999999999999999853
No 168
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.27 E-value=1.4e-06 Score=90.57 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=31.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~~ 104 (563)
.||+|||||++|+++|+.|+++|+ +|+|||+++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 589999999999999999999999 899999986
No 169
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.27 E-value=1.1e-05 Score=85.79 Aligned_cols=106 Identities=19% Similarity=0.221 Sum_probs=77.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.....
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 221 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS----------------------------------------- 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----------------------------------------
Confidence 457999999999999999999999999999998521100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|+++..+++ +....|.+.+..++...++.+|.||+|+|.
T Consensus 222 ---------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 222 ---------------MDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDD-KNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp ---------------SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-TTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred ---------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecC-CCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 0122334566667789999999999999987311 344456665323444467999999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 286 ~p~ 288 (478)
T 1v59_A 286 RPY 288 (478)
T ss_dssp EEC
T ss_pred CcC
Confidence 543
No 170
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.26 E-value=4.7e-07 Score=95.54 Aligned_cols=39 Identities=31% Similarity=0.442 Sum_probs=34.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..+|
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG 159 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGG 159 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCC
Confidence 468999999999999999999999999999999864433
No 171
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.26 E-value=5.9e-07 Score=93.54 Aligned_cols=105 Identities=11% Similarity=0.123 Sum_probs=67.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCc--EEEEeccCCCCCCccCCCCccccch-h-hHHHHhhccCcccHHHHHHHHH
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLR--VGLVEREDFSSGTSSRSTKLIHGGV-R-YLEKAVFNLDYGQLKLVFHALE 144 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~--V~llEk~~~~~g~s~~~~~~~~~g~-~-~~~~~~~~~~~~~~~~~~~~l~ 144 (563)
...+||+|||||++|+++|+.|++.|.+ |+|||+.+..... .... . ++..
T Consensus 5 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~--------~~~~~~~~~~~------------------ 58 (408)
T 2gqw_A 5 ALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD--------RPPLSKDFMAH------------------ 58 (408)
T ss_dssp -CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC--------SGGGGTHHHHH------------------
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCccc--------CCCCCHHHhCC------------------
Confidence 3568999999999999999999999984 9999998521100 0000 0 0000
Q ss_pred HhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeE
Q 008503 145 ERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVV 224 (563)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~V 224 (563)
.. +..-.+. .+.+.|++++.+++|+.+..+. .. |.+ .+++ ++.+|.|
T Consensus 59 ------------~~-~~~~~~~----------~~~~~~v~~~~~~~v~~i~~~~--~~---v~~---~~g~--~~~~d~l 105 (408)
T 2gqw_A 59 ------------GD-AEKIRLD----------CKRAPEVEWLLGVTAQSFDPQA--HT---VAL---SDGR--TLPYGTL 105 (408)
T ss_dssp ------------CC-GGGSBCC----------CTTSCSCEEEETCCEEEEETTT--TE---EEE---TTSC--EEECSEE
T ss_pred ------------Cc-hhhhhHH----------HHHHCCCEEEcCCEEEEEECCC--CE---EEE---CCCC--EEECCEE
Confidence 00 0000000 2245799999999999987653 23 333 3343 6899999
Q ss_pred EEccCcCh
Q 008503 225 VNAAGPFC 232 (563)
Q Consensus 225 I~AtG~~s 232 (563)
|+|||...
T Consensus 106 viAtG~~~ 113 (408)
T 2gqw_A 106 VLATGAAP 113 (408)
T ss_dssp EECCCEEE
T ss_pred EECCCCCC
Confidence 99999843
No 172
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.26 E-value=8.2e-06 Score=84.69 Aligned_cols=110 Identities=19% Similarity=0.237 Sum_probs=82.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+.....
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~----------------------------------------- 180 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR----------------------------------------- 180 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh-----------------------------------------
Confidence 457999999999999999999999999999987521100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+.+++.|++++++++|.++..++ +++.+|.+ .+|+ ++.||.||+|+|.
T Consensus 181 --------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~---~dG~--~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 181 --------------VVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVL---SDGN--TLPCDLVVVGVGV 239 (404)
T ss_dssp --------------TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEE---TTSC--EEECSEEEECCCE
T ss_pred --------------ccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEe---CCCC--EEEcCEEEECcCC
Confidence 0122344466677788999999999999998765 57777766 3453 7899999999998
Q ss_pred Chhh-hhhhhcCC
Q 008503 231 FCDS-VRKLADQN 242 (563)
Q Consensus 231 ~s~~-l~~~~g~~ 242 (563)
..+. +.+..|..
T Consensus 240 ~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 240 IPNVEIAAAAGLP 252 (404)
T ss_dssp EECCHHHHHTTCC
T ss_pred ccCHHHHHhCCCC
Confidence 6543 44444543
No 173
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.25 E-value=1.8e-06 Score=90.79 Aligned_cols=107 Identities=13% Similarity=0.202 Sum_probs=69.9
Q ss_pred CccEEEECCchHHHHHHHHHHH---CCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 71 PLDILVIGGGATGCGVALDAAT---RGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~---~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
..||||||||++|+++|+.|++ .|++|+|||+++.... .+...+..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~---------~~~~~~~~---------------------- 52 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF---------VPSNPWVG---------------------- 52 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC---------GGGHHHHH----------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc---------cCCccccc----------------------
Confidence 3699999999999999999999 8999999999862100 00000000
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
.+...+..+...+.+.+.+.|++++. .+|+.+..++ .. |.+ .++ .++.+|.||+|
T Consensus 53 --------------~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~--~~---V~~---~~g--~~i~~d~lviA 107 (437)
T 3sx6_A 53 --------------VGWKERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEA--QN---ITL---ADG--NTVHYDYLMIA 107 (437)
T ss_dssp --------------HTSSCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTT--TE---EEE---TTS--CEEECSEEEEC
T ss_pred --------------cCccCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCC--CE---EEE---CCC--CEEECCEEEEC
Confidence 01112222222344556678999985 6899887653 22 333 344 36899999999
Q ss_pred cCcChh
Q 008503 228 AGPFCD 233 (563)
Q Consensus 228 tG~~s~ 233 (563)
+|....
T Consensus 108 tG~~~~ 113 (437)
T 3sx6_A 108 TGPKLA 113 (437)
T ss_dssp CCCEEC
T ss_pred CCCCcC
Confidence 998543
No 174
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.24 E-value=7.4e-07 Score=89.80 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=35.9
Q ss_pred CCCCccEEEECCchHHHHHHHHHHH--CCCcEEEEeccCCCCCC
Q 008503 68 NSNPLDILVIGGGATGCGVALDAAT--RGLRVGLVEREDFSSGT 109 (563)
Q Consensus 68 ~~~~~DVvIIGaGiaG~~~A~~la~--~G~~V~llEk~~~~~g~ 109 (563)
+..++||+|||||++|+++|++|++ .|++|+|+||++..+|.
T Consensus 62 ~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~ 105 (326)
T 3fpz_A 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG 105 (326)
T ss_dssp HTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT
T ss_pred hccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCce
Confidence 3567999999999999999999985 49999999998755443
No 175
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.24 E-value=1.1e-05 Score=84.12 Aligned_cols=110 Identities=20% Similarity=0.183 Sum_probs=82.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+.....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------------------------------------- 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------------------------------------- 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-----------------------------------------
Confidence 457999999999999999999999999999998521100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+.+++.|+++++++.|+++..++ +++.+|.+ .+|+ ++.||.||+|+|.
T Consensus 191 --------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l---~dG~--~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 191 --------------VAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRM---QDGS--VIPADIVIVGIGI 249 (415)
T ss_dssp --------------TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEE---SSSC--EEECSEEEECSCC
T ss_pred --------------hcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEe---CCCC--EEEcCEEEECCCC
Confidence 0122334456667788999999999999998765 67878876 3443 7899999999998
Q ss_pred Chhh-hhhhhcCC
Q 008503 231 FCDS-VRKLADQN 242 (563)
Q Consensus 231 ~s~~-l~~~~g~~ 242 (563)
..+. +.+..|..
T Consensus 250 ~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 250 VPCVGALISAGAS 262 (415)
T ss_dssp EESCHHHHHTTCC
T ss_pred ccChHHHHhCCCC
Confidence 6543 44444443
No 176
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.23 E-value=9.6e-06 Score=83.54 Aligned_cols=109 Identities=18% Similarity=0.173 Sum_probs=79.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-+|+|||+|.+|+.+|..|++.|.+|+++|+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------------------------------------ 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------------------------------------
Confidence 46899999999999999999999999999999752110
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
...+..+...+.+.+++.|++++++++|+++..++ +. ..|.+ .+| .++.+|.||+|+|.
T Consensus 183 -------------~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~---~~g--~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 183 -------------GLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EG-LEAHL---SDG--EVIPCDLVVSAVGL 241 (384)
T ss_dssp -------------TTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TE-EEEEE---TTS--CEEEESEEEECSCE
T ss_pred -------------cccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CE-EEEEE---CCC--CEEECCEEEECcCC
Confidence 00122344466677778999999999999998764 22 23443 344 36899999999998
Q ss_pred Chhh-hhhhhcCC
Q 008503 231 FCDS-VRKLADQN 242 (563)
Q Consensus 231 ~s~~-l~~~~g~~ 242 (563)
+.+. +.+..|..
T Consensus 242 ~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 242 RPRTELAFAAGLA 254 (384)
T ss_dssp EECCHHHHHTTCC
T ss_pred CcCHHHHHHCCCC
Confidence 7653 44444543
No 177
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.23 E-value=1.2e-05 Score=86.46 Aligned_cols=112 Identities=15% Similarity=0.172 Sum_probs=82.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||||.+|+-+|..+++.|.+|+++|+.+....
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------------- 251 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL------------------------------------------- 251 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-------------------------------------------
Confidence 6899999999999999999999999999999752100
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
..+..+...+.+.+++.|++++++++|+++..+++ +++.++.+.. .+|+ .++.||.||+|+|.+
T Consensus 252 -------------~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~-~~G~-~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 252 -------------IKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMT-PNGE-MRIETDFVFLGLGEQ 315 (523)
T ss_dssp -------------CCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEE-TTEE-EEEECSCEEECCCCE
T ss_pred -------------cccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEE-CCCc-EEEEcCEEEECcCCc
Confidence 01123344667777889999999999999987544 5664444443 2332 279999999999987
Q ss_pred hhh--hhhhhcCC
Q 008503 232 CDS--VRKLADQN 242 (563)
Q Consensus 232 s~~--l~~~~g~~ 242 (563)
.+. +.+..|..
T Consensus 316 p~~~~~l~~~gl~ 328 (523)
T 1mo9_A 316 PRSAELAKILGLD 328 (523)
T ss_dssp ECCHHHHHHHTCC
T ss_pred cCCccCHHHcCCc
Confidence 654 34444543
No 178
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.21 E-value=2.7e-06 Score=89.30 Aligned_cols=113 Identities=15% Similarity=0.140 Sum_probs=69.9
Q ss_pred cEEEECCchHHHHHHHHHHHCC--CcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 73 DILVIGGGATGCGVALDAATRG--LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.|||||||++|+++|..|++.| .+|+|||+++..... .+++.+.-. ...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~--------~~~l~~~~~---~~~------------------ 52 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA--------NCALPYVIG---EVV------------------ 52 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBC--------GGGHHHHHT---TSS------------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCC--------cchhHHHHc---CCc------------------
Confidence 5999999999999999999988 579999998532111 011111100 000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
...... -...+. +...++|++++.+++|+.+..+. +. +.+.+..++...++.+|.+|+|||.
T Consensus 53 -~~~~~~-----~~~~~~-------~~~~~~~i~~~~~~~V~~id~~~---~~--~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 53 -EDRRYA-----LAYTPE-------KFYDRKQITVKTYHEVIAINDER---QT--VSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp -CCGGGT-----BCCCHH-------HHHHHHCCEEEETEEEEEEETTT---TE--EEEEETTTTEEEEEECSEEEECCCE
T ss_pred -cchhhh-----hhcCHH-------HHHHhcCCEEEeCCeEEEEEccC---cE--EEEEeccCCceEEEEcCEEEECCCC
Confidence 000000 001111 22346799999999999987654 22 3333335666678999999999997
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
..
T Consensus 115 ~p 116 (437)
T 4eqs_A 115 SA 116 (437)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 179
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.21 E-value=7.8e-07 Score=92.69 Aligned_cols=104 Identities=21% Similarity=0.205 Sum_probs=66.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCc--EEEEeccCCCCCCccCCCCccccchh--hHHHHhhccCcccHHHHHHHHHHhh
Q 008503 72 LDILVIGGGATGCGVALDAATRGLR--VGLVEREDFSSGTSSRSTKLIHGGVR--YLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~--V~llEk~~~~~g~s~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.||+|||||++|+++|+.|.++|.+ |+|+|+.+..... .+.+. ++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~--------~~~l~~~~~~g--------------------- 53 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD--------RPSLSKAVLDG--------------------- 53 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC--------SGGGGTHHHHT---------------------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC--------CccccHHHhCC---------------------
Confidence 4899999999999999999999988 9999998532110 00000 0000
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
.. .+..- ..+ .+...+.|++++.+++|+.+..+. .. |.+ .+++ ++.++.||+|
T Consensus 54 -----~~----~~~~~-~~~-------~~~~~~~~i~~~~~~~v~~id~~~--~~---v~~---~~g~--~~~~d~lvlA 106 (410)
T 3ef6_A 54 -----SL----ERPPI-LAE-------ADWYGEARIDMLTGPEVTALDVQT--RT---ISL---DDGT--TLSADAIVIA 106 (410)
T ss_dssp -----SS----SSCCB-SSC-------TTHHHHTTCEEEESCCEEEEETTT--TE---EEE---TTSC--EEECSEEEEC
T ss_pred -----CC----CHHHh-cCC-------HHHHHHCCCEEEeCCEEEEEECCC--CE---EEE---CCCC--EEECCEEEEc
Confidence 00 00000 111 122346799999999999997653 22 332 3443 6899999999
Q ss_pred cCcC
Q 008503 228 AGPF 231 (563)
Q Consensus 228 tG~~ 231 (563)
||..
T Consensus 107 tG~~ 110 (410)
T 3ef6_A 107 TGSR 110 (410)
T ss_dssp CCEE
T ss_pred cCCc
Confidence 9974
No 180
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.20 E-value=3.3e-06 Score=90.16 Aligned_cols=32 Identities=41% Similarity=0.663 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHH-CCCcEEEEec
Q 008503 71 PLDILVIGGGATGCGVALDAAT-RGLRVGLVER 102 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~-~G~~V~llEk 102 (563)
+|||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 181
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.20 E-value=1.9e-06 Score=88.84 Aligned_cols=107 Identities=19% Similarity=0.230 Sum_probs=67.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCC--CcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 71 PLDILVIGGGATGCGVALDAATRG--LRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
++||+|||||++|+++|..|++.| .+|+|+|+++ |..... ..++.. +.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~---g~~~~~-~~l~~~---~~----------------------- 53 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD---GRSYSK-PMLSTG---FS----------------------- 53 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC---CCEECG-GGGGGT---TT-----------------------
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC---CCccCc-ccccHH---Hh-----------------------
Confidence 589999999999999999999999 5689999874 111100 000000 00
Q ss_pred cccCCcceEEEecCceechHHHHH-HHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNV-GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
....+..+.. .+.+.+.+.|++++.+++|+.+..++ .. |.+ .+ .++.+|.||+|
T Consensus 54 --------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~---v~~----~~--~~~~~d~lviA 108 (384)
T 2v3a_A 54 --------------KNKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGH--QR---IWI----GE--EEVRYRDLVLA 108 (384)
T ss_dssp --------------TTCCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGG--TE---EEE----TT--EEEECSEEEEC
T ss_pred --------------CCCCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCC--CE---EEE----CC--cEEECCEEEEe
Confidence 0001111111 12233456899999999999887653 23 322 22 36999999999
Q ss_pred cCcCh
Q 008503 228 AGPFC 232 (563)
Q Consensus 228 tG~~s 232 (563)
||...
T Consensus 109 tG~~p 113 (384)
T 2v3a_A 109 WGAEP 113 (384)
T ss_dssp CCEEE
T ss_pred CCCCc
Confidence 99743
No 182
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.19 E-value=5.3e-06 Score=87.81 Aligned_cols=36 Identities=42% Similarity=0.682 Sum_probs=33.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
.+|||+|||||++|+++|+.|++.|++|+|||++.+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 38 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKAL 38 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 469999999999999999999999999999999853
No 183
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=2.5e-06 Score=91.22 Aligned_cols=34 Identities=41% Similarity=0.652 Sum_probs=32.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
+|||+|||||++|+++|+.|++.|++|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999985
No 184
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=4.8e-06 Score=87.96 Aligned_cols=35 Identities=34% Similarity=0.512 Sum_probs=32.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.+|||+|||||++|+++|..|++.|++|+|||+..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 46899999999999999999999999999999953
No 185
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.17 E-value=6e-07 Score=94.17 Aligned_cols=33 Identities=27% Similarity=0.539 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHH--CCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAAT--RGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~--~G~~V~llEk~~ 104 (563)
.||+|||||++|+++|+.|++ .|++|+|||+++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 599999999999999999999 899999999985
No 186
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.16 E-value=2.2e-05 Score=83.07 Aligned_cols=104 Identities=22% Similarity=0.233 Sum_probs=75.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.....
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ----------------------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------------------------------------
Confidence 358999999999999999999999999999997521000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|+++..++ +.+ .|.+.+..+|+..++.+|.||+|+|.
T Consensus 208 ---------------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 208 ---------------GDPETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGL-HVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp ---------------SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEE-EEEEEETTCCSCEEEEESEEEECSCE
T ss_pred ---------------cCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEE-EEEEeecCCCceeEEEcCEEEECCCc
Confidence 012233355666778999999999999998764 333 35543211254457999999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 270 ~p~ 272 (464)
T 2eq6_A 270 KPR 272 (464)
T ss_dssp EES
T ss_pred ccC
Confidence 543
No 187
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=98.15 E-value=6.7e-07 Score=67.93 Aligned_cols=50 Identities=4% Similarity=-0.086 Sum_probs=44.6
Q ss_pred CCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHHHhhhHHHHHHHHHHHcCC
Q 008503 475 GYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDAAGRALPRIIEIMATEHKW 530 (563)
Q Consensus 475 c~~v~~~ei~~ai~~e~~~~~~D~l~rRtr~g~g~~~~g~~~~~~v~~~la~~l~~ 530 (563)
|+.||++||+.||++ +.++.+.|+++|++|++ | ..|.+.|.++|+++++-
T Consensus 6 C~~Vt~~~I~~AI~~--Ga~t~~~v~~~t~aGt~--C--G~C~~~i~~il~~~~~~ 55 (73)
T 4e6k_G 6 CQGVTDNQIRDAIYE--GCCSYREVREATGVGTQ--C--GKCASLAKQVVRETLND 55 (73)
T ss_dssp TTTEEHHHHHHHHHT--TCCSHHHHHHHHCTTSS--S--CTTHHHHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHh--cCCCHHHHHHHhCCCCC--C--CchHHHHHHHHHHHHhh
Confidence 999999999999986 67778889999999996 7 37999999999988753
No 188
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.15 E-value=5.4e-06 Score=89.18 Aligned_cols=36 Identities=31% Similarity=0.312 Sum_probs=33.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..++||+|||||++|+++|+.|++.|++|+|||+++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456999999999999999999999999999999986
No 189
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.12 E-value=2e-05 Score=86.18 Aligned_cols=35 Identities=29% Similarity=0.540 Sum_probs=32.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|||+|||||++|+++|..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45799999999999999999999999999999984
No 190
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.12 E-value=2.4e-05 Score=81.97 Aligned_cols=110 Identities=18% Similarity=0.211 Sum_probs=79.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++|+.+.....
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~----------------------------------------- 187 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER----------------------------------------- 187 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------------------------------
Confidence 457999999999999999999999999999987421100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEE--cCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIK--DEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~--~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
..+..+...+.+.+++.|++++++++|+++.. ++ +++++|.+ .+| ..+.+|.||+|+
T Consensus 188 --------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~---~~G--~~i~~D~Vv~a~ 246 (431)
T 1q1r_A 188 --------------VTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLC---EDG--TRLPADLVIAGI 246 (431)
T ss_dssp --------------TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEE---TTS--CEEECSEEEECC
T ss_pred --------------hhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEe---CCC--CEEEcCEEEECC
Confidence 00122333556667788999999999999987 33 57767765 344 368999999999
Q ss_pred CcChh-hhhhhhcCC
Q 008503 229 GPFCD-SVRKLADQN 242 (563)
Q Consensus 229 G~~s~-~l~~~~g~~ 242 (563)
|...+ .+.+..|..
T Consensus 247 G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 247 GLIPNCELASAAGLQ 261 (431)
T ss_dssp CEEECCHHHHHTTCC
T ss_pred CCCcCcchhhccCCC
Confidence 97543 344444543
No 191
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.12 E-value=2.2e-05 Score=78.76 Aligned_cols=98 Identities=21% Similarity=0.218 Sum_probs=77.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|.++++.+....
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 35799999999999999999999999999998742100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHC-CCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALA-GAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~-G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
...+.+.+.+. |+++++++.|.++..++ +++.+|.+.+..+++..++.+|.||+|+|
T Consensus 211 --------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 268 (338)
T 3itj_A 211 --------------------STIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIG 268 (338)
T ss_dssp --------------------CHHHHHHHHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEECSEEEECSC
T ss_pred --------------------CHHHHHHHHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEeCEEEEEeC
Confidence 01233444454 99999999999998775 57888988875566667899999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
...
T Consensus 269 ~~p 271 (338)
T 3itj_A 269 HTP 271 (338)
T ss_dssp EEE
T ss_pred CCC
Confidence 744
No 192
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.10 E-value=2e-05 Score=83.17 Aligned_cols=99 Identities=18% Similarity=0.160 Sum_probs=73.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+.+|..|++.|.+|+|+|+.+.... .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-----------~------------------------------ 205 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-----------T------------------------------ 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------T------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-----------c------------------------------
Confidence 35799999999999999999999999999999752100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|+++..++ +.+ .+.+ .++ .++.+|.||+|+|.
T Consensus 206 ---------------~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~---~~g--~~i~~D~vv~A~G~ 262 (455)
T 2yqu_A 206 ---------------MDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGA-RVEL---EGG--EVLEADRVLVAVGR 262 (455)
T ss_dssp ---------------SCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEE---TTS--CEEEESEEEECSCE
T ss_pred ---------------cCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEE---CCC--eEEEcCEEEECcCC
Confidence 011233345666777899999999999998764 232 2322 234 36899999999998
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
...
T Consensus 263 ~p~ 265 (455)
T 2yqu_A 263 RPY 265 (455)
T ss_dssp EEC
T ss_pred CcC
Confidence 764
No 193
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.09 E-value=2.9e-05 Score=77.04 Aligned_cols=97 Identities=21% Similarity=0.250 Sum_probs=75.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+... .
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----~------------------------------------- 181 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----A------------------------------------- 181 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----S-------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----c-------------------------------------
Confidence 3479999999999999999999999999999874210 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+ ..+.+.+.+ .|++++++++|+++..++ +++.+|.+.+..+|+..++.+|.||+|+|
T Consensus 182 ---------------~-----~~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 239 (310)
T 1fl2_A 182 ---------------D-----QVLQDKLRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELAGIFVQIG 239 (310)
T ss_dssp ---------------C-----HHHHHHHHTCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred ---------------c-----HHHHHHHhhCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcCEEEEeeC
Confidence 0 012333445 699999999999998764 57888888764456656899999999999
Q ss_pred cC
Q 008503 230 PF 231 (563)
Q Consensus 230 ~~ 231 (563)
.-
T Consensus 240 ~~ 241 (310)
T 1fl2_A 240 LL 241 (310)
T ss_dssp EE
T ss_pred Cc
Confidence 63
No 194
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.09 E-value=9.7e-06 Score=85.44 Aligned_cols=36 Identities=31% Similarity=0.537 Sum_probs=33.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
.+|||+|||||++|+++|+.|++.|++|+|||++.+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 38 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKEL 38 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCT
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCC
Confidence 468999999999999999999999999999999853
No 195
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.09 E-value=2.3e-05 Score=78.30 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=75.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|.++++.+....
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------ 192 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------ 192 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC------------------------------------------
Confidence 35799999999999999999999999999998741100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
+ ..+.+.+.+.|++++++++|+++..++ +++.+|.+.+..+|+..++.+|.||+|+|.
T Consensus 193 ---------------~-----~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 193 ---------------E-----NAYVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp ---------------C-----HHHHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred ---------------C-----HHHHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 0 012334457899999999999998764 568788887534565567999999999996
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
..
T Consensus 251 ~p 252 (319)
T 3cty_A 251 IP 252 (319)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 196
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.08 E-value=3.5e-05 Score=81.70 Aligned_cols=106 Identities=21% Similarity=0.198 Sum_probs=75.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+..... .
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~------------------------------ 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV----------G------------------------------ 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS----------S------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc----------c------------------------------
Confidence 357999999999999999999999999999997521000 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|+++..+++ +.+ .+.+.+..++...++.+|.||+|+|.
T Consensus 218 ---------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 218 ---------------IDMEISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKI-DVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp ---------------CCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCE-EEEEEETTSCCCEEEEESEEEECSCE
T ss_pred ---------------cCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceE-EEEEEecCCCCceEEEcCEEEECcCC
Confidence 0122334566667789999999999999987653 223 34443222333457999999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 281 ~p~ 283 (474)
T 1zmd_A 281 RPF 283 (474)
T ss_dssp EEC
T ss_pred CcC
Confidence 543
No 197
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.07 E-value=3.1e-05 Score=81.59 Aligned_cols=102 Identities=20% Similarity=0.228 Sum_probs=74.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..-+|+|||||.+|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------~----------------------------- 208 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-----------G----------------------------- 208 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------T-----------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----------c-----------------------------
Confidence 346899999999999999999999999999999752100 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+..+...+.+.+++.|++++++++|+++..++ +.+ .+.+.+ +++..++.+|.||+|+|
T Consensus 209 ----------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~--~g~~~~~~~D~vv~a~G 267 (455)
T 1ebd_A 209 ----------------FEKQMAAIIKKRLKKKGVEVVTNALAKGAEERE--DGV-TVTYEA--NGETKTIDADYVLVTVG 267 (455)
T ss_dssp ----------------SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEE-EEEEEE--TTEEEEEEESEEEECSC
T ss_pred ----------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeE-EEEEEe--CCceeEEEcCEEEECcC
Confidence 011233355666778999999999999998764 333 344432 33445799999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
...
T Consensus 268 ~~p 270 (455)
T 1ebd_A 268 RRP 270 (455)
T ss_dssp EEE
T ss_pred CCc
Confidence 754
No 198
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.05 E-value=1.6e-05 Score=82.63 Aligned_cols=109 Identities=21% Similarity=0.255 Sum_probs=80.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+... ..
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-----------------~~------------------------ 181 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-----------------VR------------------------ 181 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----------------HH------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-----------------hh------------------------
Confidence 4589999999999999999999999999999874210 00
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+.+++.|+++++++.|.++..+ +++.+|.+ .+|+ ++.+|.||+|+|.
T Consensus 182 --------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~---~dg~--~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 182 --------------VLGRRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMA---SDGR--SFVADSALICVGA 239 (410)
T ss_dssp --------------HHCHHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEE---TTSC--EEECSEEEECSCE
T ss_pred --------------hcCHHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEE---CCCC--EEEcCEEEEeeCC
Confidence 011234445666777899999999999999764 35556665 3453 7899999999998
Q ss_pred Chh-hhhhhhcCC
Q 008503 231 FCD-SVRKLADQN 242 (563)
Q Consensus 231 ~s~-~l~~~~g~~ 242 (563)
..+ .+.+..|..
T Consensus 240 ~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 240 EPADQLARQAGLA 252 (410)
T ss_dssp EECCHHHHHTTCC
T ss_pred eecHHHHHhCCCc
Confidence 665 244444543
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.04 E-value=3.4e-05 Score=81.94 Aligned_cols=103 Identities=16% Similarity=0.131 Sum_probs=74.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..-.|+|||||.+|+-+|..|++.|.+|+++|+.+.... .
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------~----------------------------- 223 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-----------K----------------------------- 223 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----------T-----------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-----------c-----------------------------
Confidence 346899999999999999999999999999999752100 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+..+...+.+.+++.|++++++++|+++..+++ +.+..|.+ .+|+ .++.+|.||+|+|
T Consensus 224 ----------------~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~---~~G~-~~i~~D~vv~a~G 282 (479)
T 2hqm_A 224 ----------------FDECIQNTITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHM---NDSK-SIDDVDELIWTIG 282 (479)
T ss_dssp ----------------SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEE---TTSC-EEEEESEEEECSC
T ss_pred ----------------cCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEE---CCCc-EEEEcCEEEECCC
Confidence 0112333556667788999999999999987643 33334544 3443 4799999999999
Q ss_pred cChh
Q 008503 230 PFCD 233 (563)
Q Consensus 230 ~~s~ 233 (563)
...+
T Consensus 283 ~~p~ 286 (479)
T 2hqm_A 283 RKSH 286 (479)
T ss_dssp EEEC
T ss_pred CCCc
Confidence 6443
No 200
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.03 E-value=3.4e-05 Score=81.27 Aligned_cols=101 Identities=17% Similarity=0.189 Sum_probs=74.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------~----------------------------- 205 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-----------S----------------------------- 205 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------T-----------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-----------h-----------------------------
Confidence 345899999999999999999999999999999752100 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+ +..+...+.+.+++.|++++++++|+++..+++ +.+ .|.+ .+|+ ++.+|.||+|+|
T Consensus 206 ---------------~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~---~~g~--~i~~D~vv~a~G 262 (450)
T 1ges_A 206 ---------------F-DPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD-GSL-TLEL---EDGR--SETVDCLIWAIG 262 (450)
T ss_dssp ---------------S-CHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT-SCE-EEEE---TTSC--EEEESEEEECSC
T ss_pred ---------------h-hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-cEE-EEEE---CCCc--EEEcCEEEECCC
Confidence 0 112333556667788999999999999987643 322 3443 3443 689999999999
Q ss_pred cChh
Q 008503 230 PFCD 233 (563)
Q Consensus 230 ~~s~ 233 (563)
...+
T Consensus 263 ~~p~ 266 (450)
T 1ges_A 263 REPA 266 (450)
T ss_dssp EEES
T ss_pred CCcC
Confidence 7543
No 201
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.02 E-value=6.3e-05 Score=80.05 Aligned_cols=102 Identities=21% Similarity=0.147 Sum_probs=75.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++++..+...
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~------------------------------------------ 222 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG------------------------------------------ 222 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc------------------------------------------
Confidence 34799999999999999999999999999998632100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|+++++++.|.++...++ +.+ .|.+.+..+++..++.+|.||+|+|.
T Consensus 223 ---------------~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 223 ---------------FDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT-NQL-QVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp ---------------SCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCE-EEEEEETTTTEEEEEEESEEEECSCE
T ss_pred ---------------CCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcE-EEEEEeCCCCeeEEEECCEEEEcccC
Confidence 0122334556667789999999999999987543 343 45555533455456899999999996
Q ss_pred C
Q 008503 231 F 231 (563)
Q Consensus 231 ~ 231 (563)
-
T Consensus 286 ~ 286 (488)
T 3dgz_A 286 V 286 (488)
T ss_dssp E
T ss_pred C
Confidence 3
No 202
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.02 E-value=5.4e-05 Score=83.90 Aligned_cols=41 Identities=29% Similarity=0.505 Sum_probs=35.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
...+||+|||||++|+.+|+.|+++|++|+|||+++..+|.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCe
Confidence 34689999999999999999999999999999998644443
No 203
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.99 E-value=3.4e-05 Score=81.17 Aligned_cols=100 Identities=22% Similarity=0.196 Sum_probs=74.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
...+|+|||||.+|+.+|..|++.|.+|+|+|+.+..... +
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------~-------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------Y-------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------T--------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------c--------------------------
Confidence 4579999999999999999999999999999998521100 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+..+...+.+.+++.|++++++++|+++..+ ++++.|.. ++ .++.+|.||+|+|
T Consensus 189 ----------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~----~~--~~i~~d~vi~a~G 243 (447)
T 1nhp_A 189 ----------------LDKEFTDVLTEEMEANNITIATGETVERYEGD---GRVQKVVT----DK--NAYDADLVVVAVG 243 (447)
T ss_dssp ----------------CCHHHHHHHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEE----SS--CEEECSEEEECSC
T ss_pred ----------------CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEE----CC--CEEECCEEEECcC
Confidence 01233445666777899999999999999754 34444433 23 3689999999999
Q ss_pred cChh
Q 008503 230 PFCD 233 (563)
Q Consensus 230 ~~s~ 233 (563)
...+
T Consensus 244 ~~p~ 247 (447)
T 1nhp_A 244 VRPN 247 (447)
T ss_dssp EEES
T ss_pred CCCC
Confidence 7543
No 204
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.98 E-value=6.9e-05 Score=75.18 Aligned_cols=101 Identities=21% Similarity=0.211 Sum_probs=76.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||+|.+|+-+|..|++.|.+|.++++.+.... .
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~-----------~------------------------------- 190 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA-----------H------------------------------- 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS-----------C-------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc-----------c-------------------------------
Confidence 4799999999999999999999999999998742100 0
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
..+...+.+.+++.|+++++++.|.++..+ +++.+|.+.+..+|+..++.+|.||+|+|..
T Consensus 191 ----------------~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 191 ----------------EASVKELMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp ----------------HHHHHHHHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ----------------HHHHHHHHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 011123455566789999999999999874 4677787764335655689999999999975
Q ss_pred hh
Q 008503 232 CD 233 (563)
Q Consensus 232 s~ 233 (563)
.+
T Consensus 252 p~ 253 (335)
T 2zbw_A 252 TK 253 (335)
T ss_dssp EE
T ss_pred CC
Confidence 53
No 205
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.97 E-value=4.2e-06 Score=87.66 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=29.5
Q ss_pred cEEEECCchHHHHHHHHHHHCC--CcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRG--LRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~~ 104 (563)
.|||||||++|+++|..|.+.+ ++|+|||+++
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 6999999999999999999875 8999999985
No 206
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.97 E-value=3.6e-05 Score=81.48 Aligned_cols=104 Identities=19% Similarity=0.179 Sum_probs=75.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.....
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~----------------------------------------- 215 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT----------------------------------------- 215 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-----------------------------------------
Confidence 457999999999999999999999999999998521000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|.++..++ +.+ .+.+.+..+|+..++.+|.||+|+|.
T Consensus 216 ---------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 216 ---------------MDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG--DGV-KLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp ---------------SCHHHHHHHHHHHHHSSCCEECSEEEEEEECSS--SSE-EEEEEESSSCCCEEEEESEEECCCCE
T ss_pred ---------------ccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC--CeE-EEEEEecCCCcceEEECCEEEECCCC
Confidence 011233355666778999999999999998664 333 35554322443457999999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 278 ~p~ 280 (470)
T 1dxl_A 278 TPF 280 (470)
T ss_dssp EEC
T ss_pred CcC
Confidence 543
No 207
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.96 E-value=6.7e-05 Score=79.27 Aligned_cols=100 Identities=23% Similarity=0.149 Sum_probs=73.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----------~------------------------------ 204 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----------Q------------------------------ 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------T------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----------c------------------------------
Confidence 45799999999999999999999999999998742100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
+ +..+...+.+.+++.|++++++++|+++..+++ . ..|.+ .+|+. ++.+|.||+|+|.
T Consensus 205 --------------~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~--~-~~v~~---~~G~~-~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 205 --------------F-DPLLSATLAENMHAQGIETHLEFAVAALERDAQ--G-TTLVA---QDGTR-LEGFDSVIWAVGR 262 (463)
T ss_dssp --------------S-CHHHHHHHHHHHHHTTCEEESSCCEEEEEEETT--E-EEEEE---TTCCE-EEEESEEEECSCE
T ss_pred --------------c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC--e-EEEEE---eCCcE-EEEcCEEEECCCC
Confidence 0 112223456667789999999999999987643 2 23433 34542 6899999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 263 ~p~ 265 (463)
T 2r9z_A 263 APN 265 (463)
T ss_dssp EES
T ss_pred CcC
Confidence 554
No 208
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.96 E-value=7.7e-05 Score=78.64 Aligned_cols=142 Identities=14% Similarity=0.159 Sum_probs=78.9
Q ss_pred CccEEEECCchHHHHHHHHHHHC--CCcEEEEeccC-C-CCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHh
Q 008503 71 PLDILVIGGGATGCGVALDAATR--GLRVGLVERED-F-SSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEER 146 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~-~-~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 146 (563)
...|+|||||.+|+-+|..|++. |.+|.++++.+ + ....+.....+..+ .+. ..+..++. .....+.+.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p--~~~-~~~~~l~~----~~~~~~~~~ 299 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAP--KFT-DLIYSREH----AERERLLRE 299 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSH--HHH-HHHHHSCH----HHHHHHHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccCh--hHH-HHHhcCCH----HHHHHHHHH
Confidence 46899999999999999999999 99999999985 2 11100000000000 000 00001110 001111111
Q ss_pred hhcccCCcceEEEecCceechHHHHHHHHH-----HHH-HCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEE
Q 008503 147 KQAKDRSLKGAVVYYDGQMNDSRLNVGLAL-----TAA-LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTY 220 (563)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~a~-~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~ 220 (563)
... . ....+++ ++...+.+ ... ..|++++++++|+++..++ ..+.|.+.+..+|+..++.
T Consensus 300 ~~~--~--------~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~---~~~~v~~~~~~~g~~~~~~ 365 (463)
T 3s5w_A 300 YHN--T--------NYSVVDT-DLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA---QGIELALRDAGSGELSVET 365 (463)
T ss_dssp TGG--G--------TSSCBCH-HHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET---TEEEEEEEETTTCCEEEEE
T ss_pred hhc--c--------CCCcCCH-HHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC---CEEEEEEEEcCCCCeEEEE
Confidence 000 0 0011222 22222222 222 2699999999999998764 2346777765577767899
Q ss_pred eCeEEEccCcChh
Q 008503 221 AKVVVNAAGPFCD 233 (563)
Q Consensus 221 A~~VI~AtG~~s~ 233 (563)
+|.||+|+|...+
T Consensus 366 ~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 366 YDAVILATGYERQ 378 (463)
T ss_dssp ESEEEECCCEECC
T ss_pred CCEEEEeeCCCCC
Confidence 9999999997544
No 209
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.96 E-value=3.6e-05 Score=81.78 Aligned_cols=99 Identities=21% Similarity=0.259 Sum_probs=74.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
...+|+|||||.+|+-+|..|++.|.+|+++|+.+....
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------------- 223 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT----------------------------------------- 223 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-----------------------------------------
Confidence 456899999999999999999999999999999742110
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
..+..+...+.+.+++.|++++++++|+++..+ ++++.+.. ++ .++.+|.||+|+|
T Consensus 224 ---------------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~----~~--~~i~~D~vi~a~G 279 (480)
T 3cgb_A 224 ---------------IYDGDMAEYIYKEADKHHIEILTNENVKAFKGN---ERVEAVET----DK--GTYKADLVLVSVG 279 (480)
T ss_dssp ---------------SSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEE----TT--EEEECSEEEECSC
T ss_pred ---------------cCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEE----CC--CEEEcCEEEECcC
Confidence 001233345666778899999999999999764 45655543 22 3799999999999
Q ss_pred cChh
Q 008503 230 PFCD 233 (563)
Q Consensus 230 ~~s~ 233 (563)
...+
T Consensus 280 ~~p~ 283 (480)
T 3cgb_A 280 VKPN 283 (480)
T ss_dssp EEES
T ss_pred CCcC
Confidence 7653
No 210
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.95 E-value=7e-05 Score=74.90 Aligned_cols=97 Identities=18% Similarity=0.163 Sum_probs=73.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 189 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA------------------------------------------ 189 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc------------------------------------------
Confidence 35799999999999999999999999999998742100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
+ ..+.+.+.+ .|++++++++|+++..+ +++.+|.+.+..+|+..++.+|.||+|+|
T Consensus 190 ---------------~-----~~~~~~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 246 (325)
T 2q7v_A 190 ---------------N-----KVAQARAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATDGVFIFIG 246 (325)
T ss_dssp ---------------C-----HHHHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred ---------------c-----hHHHHHHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcCEEEEccC
Confidence 0 012223333 59999999999999864 46778888753456656899999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
.-.
T Consensus 247 ~~p 249 (325)
T 2q7v_A 247 HVP 249 (325)
T ss_dssp EEE
T ss_pred CCC
Confidence 643
No 211
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.95 E-value=4.3e-06 Score=88.02 Aligned_cols=41 Identities=27% Similarity=0.477 Sum_probs=36.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
..++||+|||||++|+++|+.|++.|++|+|+|+++..+|.
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 34689999999999999999999999999999998754444
No 212
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.94 E-value=9.1e-05 Score=78.31 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=74.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..-.|+|||||.+|+-+|..|++.|.+|+++|+.+.... .
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------~----------------------------- 212 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-----------T----------------------------- 212 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------T-----------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-----------c-----------------------------
Confidence 345899999999999999999999999999999752100 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHH-HHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTA-ALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a-~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
.+..+...+.+.+ ++.|++++++++|+++..++ +.+ .+.+.+ .+|+..++.+|.||+|+
T Consensus 213 ----------------~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~-~~g~~~~i~~D~vv~a~ 272 (468)
T 2qae_A 213 ----------------LDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG--DSV-SLEVEG-KNGKRETVTCEALLVSV 272 (468)
T ss_dssp ----------------SCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS--SSE-EEEEEC-C---EEEEEESEEEECS
T ss_pred ----------------CCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC--CeE-EEEEEc-CCCceEEEECCEEEECC
Confidence 0122334566667 78999999999999998764 233 344431 13433579999999999
Q ss_pred CcChh
Q 008503 229 GPFCD 233 (563)
Q Consensus 229 G~~s~ 233 (563)
|...+
T Consensus 273 G~~p~ 277 (468)
T 2qae_A 273 GRRPF 277 (468)
T ss_dssp CEEEC
T ss_pred CcccC
Confidence 97654
No 213
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.94 E-value=8.6e-05 Score=73.63 Aligned_cols=98 Identities=18% Similarity=0.092 Sum_probs=74.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 180 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC------------------------------------------ 180 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC------------------------------------------
Confidence 45799999999999999999999999999998742100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHH-HCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAA-LAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~-~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
++ .+.+.+. +.|+++++++.++++..++ +++.+|.+.+..+|+..++.+|.||+|+|
T Consensus 181 ---------------~~-----~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 238 (311)
T 2q0l_A 181 ---------------AP-----ITLEHAKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGFFIFVG 238 (311)
T ss_dssp ---------------CH-----HHHHHHHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred ---------------CH-----HHHHHHhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEEEEEec
Confidence 00 1222333 3699999999999998764 46777877653356556799999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
.-.
T Consensus 239 ~~p 241 (311)
T 2q0l_A 239 YDV 241 (311)
T ss_dssp EEE
T ss_pred Ccc
Confidence 643
No 214
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.94 E-value=6.6e-06 Score=84.83 Aligned_cols=42 Identities=33% Similarity=0.519 Sum_probs=37.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTS 110 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s 110 (563)
...+||+|||||++|+++|+.|++.|++|+|+|+++..+|..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 467999999999999999999999999999999987544443
No 215
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.93 E-value=9.1e-06 Score=84.73 Aligned_cols=40 Identities=28% Similarity=0.454 Sum_probs=35.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC-CcEEEEeccCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVEREDFSSG 108 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G-~~V~llEk~~~~~g 108 (563)
...+||+|||||++|+++|+.|+++| ++|+|+|+++..+|
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 35689999999999999999999999 99999999875444
No 216
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.93 E-value=7.4e-05 Score=78.65 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=74.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++|+.+.... .
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~------------------------------- 187 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY----------K------------------------------- 187 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT----------T-------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh----------h-------------------------------
Confidence 45799999999999999999999999999999752100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+.+++.|++++++++|+++..++ +++..+. .+| .++.+|.||+|+|.
T Consensus 188 --------------~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~----~~g--~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 188 --------------YFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKT----LDG--KEIKSDIAILCIGF 245 (452)
T ss_dssp --------------TSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEE----TTS--CEEEESEEEECCCE
T ss_pred --------------hhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEE----eCC--CEEECCEEEECcCC
Confidence 0012233456667788999999999999998643 5665553 234 36899999999996
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
..
T Consensus 246 ~p 247 (452)
T 2cdu_A 246 RP 247 (452)
T ss_dssp EE
T ss_pred CC
Confidence 44
No 217
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.92 E-value=6.3e-05 Score=76.44 Aligned_cols=101 Identities=17% Similarity=0.217 Sum_probs=75.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------~------------------------------- 201 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-----------H------------------------------- 201 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS-----------C-------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC-----------C-------------------------------
Confidence 4799999999999999999999999999998742100 0
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
..+...+.+..++.|++++++++|+++..++ +++.+|.+.. .+|+...+.+|.||+|+|..
T Consensus 202 ----------------~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 202 ----------------GKTAHEVERARANGTIDVYLETEVASIEESN--GVLTRVHLRS-SDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp ----------------SHHHHSSHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEE-TTCCEEEEECSEEEECCCBC
T ss_pred ----------------HHHHHHHHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEe-cCCCeEEEeCCEEEECCCCC
Confidence 0011123444567899999999999998764 5777787752 35655689999999999965
Q ss_pred hh
Q 008503 232 CD 233 (563)
Q Consensus 232 s~ 233 (563)
.+
T Consensus 263 p~ 264 (360)
T 3ab1_A 263 SN 264 (360)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 218
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.92 E-value=8.1e-05 Score=78.62 Aligned_cols=101 Identities=20% Similarity=0.247 Sum_probs=74.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----------~------------------------------ 209 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-----------N------------------------------ 209 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----------T------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-----------c------------------------------
Confidence 45899999999999999999999999999999752100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|+++..++ +.+ .+.+. .+|+..++.+|.||+|+|.
T Consensus 210 ---------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~--~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 210 ---------------EDADVSKEIEKQFKKLGVTILTATKVESIADGG--SQV-TVTVT--KDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp ---------------SCHHHHHHHHHHHHHHTCEEECSCEEEEEEECS--SCE-EEEEE--SSSCEEEEEESEEEECSCE
T ss_pred ---------------cCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC--CeE-EEEEE--cCCceEEEEcCEEEECCCC
Confidence 011233345666678899999999999998764 333 34443 2454457999999999996
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
..
T Consensus 270 ~p 271 (464)
T 2a8x_A 270 AP 271 (464)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 219
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.91 E-value=9.1e-06 Score=86.52 Aligned_cols=41 Identities=24% Similarity=0.498 Sum_probs=36.5
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
...+||+|||||++|+++|+.|++.|++|+|+|+.+..+|.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 34689999999999999999999999999999999765554
No 220
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.91 E-value=5.1e-06 Score=89.17 Aligned_cols=40 Identities=23% Similarity=0.351 Sum_probs=35.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC-CcEEEEeccCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVEREDFSSG 108 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G-~~V~llEk~~~~~g 108 (563)
+..+||+|||||++|+++|+.|++.| ++|+|+|+++..+|
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 34589999999999999999999999 99999999975555
No 221
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.91 E-value=7e-06 Score=87.56 Aligned_cols=36 Identities=31% Similarity=0.518 Sum_probs=32.6
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC--CCcEEEEeccC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~ 104 (563)
+..+||||||||++|+++|..|.++ |.+|+|||+++
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~ 46 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDP 46 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 3468999999999999999999877 89999999985
No 222
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.90 E-value=0.0001 Score=73.18 Aligned_cols=106 Identities=17% Similarity=0.077 Sum_probs=78.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
....|+|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------------- 191 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------------------------------------- 191 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-----------------------------------------
Confidence 346899999999999999999999999999998742100
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
++ .+.+.+.+ .|+++++++.|.++..+ +++.+|.+.+..+|+..++.+|.||+|+
T Consensus 192 ----------------~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~D~vv~a~ 247 (323)
T 3f8d_A 192 ----------------QP-----IYVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNVNGVFIEI 247 (323)
T ss_dssp ----------------CH-----HHHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred ----------------CH-----HHHHHHHhCCCcEEEeCCEEEEEecc---CceeEEEEEECCCCceEEEEcCEEEEEE
Confidence 00 12233333 59999999999999866 4677888876556766689999999999
Q ss_pred CcChh-hhhhhhc
Q 008503 229 GPFCD-SVRKLAD 240 (563)
Q Consensus 229 G~~s~-~l~~~~g 240 (563)
|...+ .+.+..+
T Consensus 248 G~~p~~~~~~~~g 260 (323)
T 3f8d_A 248 GFDPPTDFAKSNG 260 (323)
T ss_dssp CEECCHHHHHHTT
T ss_pred CCCCChhHHhhcC
Confidence 97554 3444333
No 223
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.90 E-value=9.1e-05 Score=76.87 Aligned_cols=105 Identities=24% Similarity=0.268 Sum_probs=76.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++|+.+.....
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR----------------------------------------- 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------------------------------
Confidence 458999999999999999999999999999998521100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+.+++.|++++++++|+++. + + .|.+ .+| .++.+|.||+|+|.
T Consensus 184 --------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~---~---~v~~---~~g--~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 184 --------------AAPATLADFVARYHAAQGVDLRFERSVTGSV-D---G---VVLL---DDG--TRIAADMVVVGIGV 237 (408)
T ss_dssp --------------TSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T---T---EEEE---TTS--CEEECSEEEECSCE
T ss_pred --------------ccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C---C---EEEE---CCC--CEEEcCEEEECcCC
Confidence 0012233456666778999999999999997 3 4 3444 344 37899999999997
Q ss_pred Chh-hhhhhhcCC
Q 008503 231 FCD-SVRKLADQN 242 (563)
Q Consensus 231 ~s~-~l~~~~g~~ 242 (563)
..+ .+.+..|..
T Consensus 238 ~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 238 LANDALARAAGLA 250 (408)
T ss_dssp EECCHHHHHHTCC
T ss_pred CccHHHHHhCCCC
Confidence 644 344555544
No 224
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.90 E-value=7.2e-06 Score=85.02 Aligned_cols=41 Identities=32% Similarity=0.479 Sum_probs=36.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHC-CCcEEEEeccCCCCCCc
Q 008503 70 NPLDILVIGGGATGCGVALDAATR-GLRVGLVEREDFSSGTS 110 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~-G~~V~llEk~~~~~g~s 110 (563)
.++||+|||||++|+++|+.|++. |++|+|+|+++..+|..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 368999999999999999999999 99999999997555543
No 225
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.89 E-value=9.1e-05 Score=79.07 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=74.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++|+.+.... .
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------~------------------------------ 214 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-----------K------------------------------ 214 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-----------T------------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-----------c------------------------------
Confidence 45799999999999999999999999999999752100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
+ +..+...+.+.+++.|++++++++|+++..+++ +.+ .|.+ .+|+. .+.+|.||+|+|.
T Consensus 215 --------------~-d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~-~v~~---~~g~~-~~~~D~vi~a~G~ 273 (500)
T 1onf_A 215 --------------F-DESVINVLENDMKKNNINIVTFADVVEIKKVSD-KNL-SIHL---SDGRI-YEHFDHVIYCVGR 273 (500)
T ss_dssp --------------S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEESST-TCE-EEEE---TTSCE-EEEESEEEECCCB
T ss_pred --------------c-chhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ceE-EEEE---CCCcE-EEECCEEEECCCC
Confidence 0 112333566677889999999999999987643 322 3443 34542 4899999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 274 ~p~ 276 (500)
T 1onf_A 274 SPD 276 (500)
T ss_dssp CCT
T ss_pred CcC
Confidence 543
No 226
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.89 E-value=8.8e-05 Score=78.08 Aligned_cols=98 Identities=12% Similarity=0.012 Sum_probs=73.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.++|||+|.+|+-+|..+++.|.+|+++++.+.... .
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------~------------------------------- 185 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP----------K------------------------------- 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST----------T-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc----------c-------------------------------
Confidence 35799999999999999999999999999999752100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+.+++.|++++++++|+++..++ +++ .|.. .++ ++.+|.||+|+|.
T Consensus 186 --------------~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~---~~g---~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 186 --------------YFDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLET---SEQ---EISCDSGIFALNL 242 (452)
T ss_dssp --------------TCCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEE---SSC---EEEESEEEECSCC
T ss_pred --------------cCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEE---CCC---EEEeCEEEECcCC
Confidence 0012334456677788999999999999998654 455 4543 222 7999999999997
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
..
T Consensus 243 ~p 244 (452)
T 3oc4_A 243 HP 244 (452)
T ss_dssp BC
T ss_pred CC
Confidence 43
No 227
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.88 E-value=1.1e-05 Score=82.37 Aligned_cols=40 Identities=25% Similarity=0.381 Sum_probs=35.8
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEecc-CCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE-DFSSG 108 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~-~~~~g 108 (563)
...+||+|||||++|+++|+.|++.|++|+|+|++ +..+|
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGG 82 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGG 82 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCC
Confidence 34689999999999999999999999999999998 75544
No 228
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.87 E-value=8.7e-05 Score=74.38 Aligned_cols=100 Identities=19% Similarity=0.179 Sum_probs=74.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|.++++.+.... .
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------~------------------------------ 197 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-----------S------------------------------ 197 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------C------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------c------------------------------
Confidence 35799999999999999999999999999998742100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHH-HHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALT-AALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
..+.+. .++.|++++++++|+++..++++.++.+|.+.+..+|+..++.+|.||+|+|
T Consensus 198 ---------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 256 (333)
T 1vdc_A 198 ---------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIG 256 (333)
T ss_dssp ---------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSC
T ss_pred ---------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeC
Confidence 011212 2457999999999999987642117777888754356556899999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
...
T Consensus 257 ~~p 259 (333)
T 1vdc_A 257 HEP 259 (333)
T ss_dssp EEE
T ss_pred Ccc
Confidence 644
No 229
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.86 E-value=9.1e-05 Score=78.93 Aligned_cols=100 Identities=20% Similarity=0.235 Sum_probs=74.2
Q ss_pred CccEEEECCchHHHHHHHHHHHC---CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 71 PLDILVIGGGATGCGVALDAATR---GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~---G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.-.|+|||||.+|+-+|..|++. |.+|+|+++.+.... .
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----------~--------------------------- 232 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-----------G--------------------------- 232 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-----------T---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-----------c---------------------------
Confidence 35799999999999999999999 999999998752100 0
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
+ +..+...+.+.+++.|++++++++|+++..+++ ....|.+ .+|+ ++.+|.||+|
T Consensus 233 -----------------~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~~~~v~~---~~G~--~i~~D~vv~a 287 (495)
T 2wpf_A 233 -----------------F-DETIREEVTKQLTANGIEIMTNENPAKVSLNTD--GSKHVTF---ESGK--TLDVDVVMMA 287 (495)
T ss_dssp -----------------S-CHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT--SCEEEEE---TTSC--EEEESEEEEC
T ss_pred -----------------c-CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC--ceEEEEE---CCCc--EEEcCEEEEC
Confidence 0 112334566677889999999999999987643 2234544 3453 7999999999
Q ss_pred cCcChh
Q 008503 228 AGPFCD 233 (563)
Q Consensus 228 tG~~s~ 233 (563)
+|...+
T Consensus 288 ~G~~p~ 293 (495)
T 2wpf_A 288 IGRIPR 293 (495)
T ss_dssp SCEEEC
T ss_pred CCCccc
Confidence 997543
No 230
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.86 E-value=9.5e-05 Score=78.87 Aligned_cols=100 Identities=18% Similarity=0.221 Sum_probs=74.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.++|||+|.+|+-+|..+++.|.+|+++|+.+.... .
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----------~------------------------------ 220 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-----------Y------------------------------ 220 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-----------C------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-----------c------------------------------
Confidence 45799999999999999999999999999998752100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|+++..++ +.+ .|. . .++ .++.+|.||+|+|.
T Consensus 221 ---------------~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v-~v~--~-~~g--~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 221 ---------------EDADAALVLEESFAERGVRLFKNARAASVTRTG--AGV-LVT--M-TDG--RTVEGSHALMTIGS 277 (499)
T ss_dssp ---------------SSHHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSE-EEE--E-TTS--CEEEESEEEECCCE
T ss_pred ---------------cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEE-EEE--E-CCC--cEEEcCEEEECCCC
Confidence 012344456677788999999999999998765 344 232 2 334 36899999999998
Q ss_pred Chhh
Q 008503 231 FCDS 234 (563)
Q Consensus 231 ~s~~ 234 (563)
..+.
T Consensus 278 ~p~~ 281 (499)
T 1xdi_A 278 VPNT 281 (499)
T ss_dssp EECC
T ss_pred CcCC
Confidence 7643
No 231
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=5.2e-05 Score=80.00 Aligned_cols=99 Identities=22% Similarity=0.210 Sum_probs=71.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------~------------------------------ 209 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-----------T------------------------------ 209 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----------T------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----------c------------------------------
Confidence 35799999999999999999999999999999852100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|+++.. + + +.+.. .+|+..++.+|.||+|+|.
T Consensus 210 ---------------~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~----v~v~~-~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 210 ---------------YDSELTAPVAESLKKLGIALHLGHSVEGYEN-G--C----LLAND-GKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp ---------------SCHHHHHHHHHHHHHHTCEEETTCEEEEEET-T--E----EEEEC-SSSCCCEECCSCEEECCCE
T ss_pred ---------------cCHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C--C----EEEEE-CCCceEEEECCEEEECcCC
Confidence 0112333455666788999999999999875 2 2 23332 3343347899999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 267 ~p~ 269 (458)
T 1lvl_A 267 RPR 269 (458)
T ss_dssp EEC
T ss_pred CcC
Confidence 543
No 232
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.85 E-value=7.3e-05 Score=79.06 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=74.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..-.|+|||||.+|+-+|..|++.|.+|+++++.+....
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------------- 213 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR----------------------------------------- 213 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-----------------------------------------
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-----------------------------------------
Confidence 345899999999999999999999999999998741100
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+..+...+.+.+++.|++++++++|+++..++ ....|.+ ++ .++.+|.||+|+|
T Consensus 214 ----------------~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~---~~~~v~~----~~--~~i~aD~Vv~a~G 268 (467)
T 1zk7_A 214 ----------------EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD---GEFVLTT----TH--GELRADKLLVATG 268 (467)
T ss_dssp ----------------SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEET---TEEEEEE----TT--EEEEESEEEECSC
T ss_pred ----------------CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC---CEEEEEE----CC--cEEEcCEEEECCC
Confidence 012334456677788999999999999998764 3333432 23 4799999999999
Q ss_pred cChh
Q 008503 230 PFCD 233 (563)
Q Consensus 230 ~~s~ 233 (563)
.+.+
T Consensus 269 ~~p~ 272 (467)
T 1zk7_A 269 RTPN 272 (467)
T ss_dssp EEES
T ss_pred CCcC
Confidence 8764
No 233
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.85 E-value=9.9e-05 Score=78.12 Aligned_cols=109 Identities=21% Similarity=0.254 Sum_probs=79.3
Q ss_pred CccEEEECCchHHHHHHHHHHHC-CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 71 PLDILVIGGGATGCGVALDAATR-GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~-G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
.-+|+|||+|.+|+-+|..+++. |.+|+++++.+.... .
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~----------~------------------------------ 198 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP----------G------------------------------ 198 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST----------T------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc----------c------------------------------
Confidence 45899999999999999999999 999999998741100 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
..+..+...+.+.+++.|++++++++|+++..++ +++. |.+. +|+ ++.+|.||+|+|
T Consensus 199 ---------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~-v~~~---~g~--~i~aD~Vv~a~G 255 (472)
T 3iwa_A 199 ---------------FTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVA-RVIT---DKR--TLDADLVILAAG 255 (472)
T ss_dssp ---------------TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEE-EEEE---SSC--EEECSEEEECSC
T ss_pred ---------------ccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEE-EEEe---CCC--EEEcCEEEECCC
Confidence 0012344456677788999999999999998754 4554 4443 343 789999999999
Q ss_pred cChh-hhhhhhcCC
Q 008503 230 PFCD-SVRKLADQN 242 (563)
Q Consensus 230 ~~s~-~l~~~~g~~ 242 (563)
...+ .+....|..
T Consensus 256 ~~p~~~l~~~~gl~ 269 (472)
T 3iwa_A 256 VSPNTQLARDAGLE 269 (472)
T ss_dssp EEECCHHHHHHTCC
T ss_pred CCcCHHHHHhCCcc
Confidence 8654 344444543
No 234
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.85 E-value=1.1e-05 Score=86.66 Aligned_cols=40 Identities=35% Similarity=0.534 Sum_probs=35.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
..+||+|||||++|+++|+.|++.|++|+|+|+++..+|.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 3579999999999999999999999999999998754443
No 235
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.85 E-value=8.6e-05 Score=79.02 Aligned_cols=100 Identities=26% Similarity=0.233 Sum_probs=74.9
Q ss_pred CccEEEECCchHHHHHHHHHHHC---CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 71 PLDILVIGGGATGCGVALDAATR---GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~---G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
.-.++|||||.+|+-+|..|++. |.+|+++|+.+.... .
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-----------~--------------------------- 228 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-----------G--------------------------- 228 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-----------T---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-----------c---------------------------
Confidence 35899999999999999999999 999999999852100 0
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
.+..+...+.+.+++.|++++++++|+++..+++ +. ..|.+ .+|+ ++.+|.||+|
T Consensus 229 ------------------~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~-~~v~~---~~G~--~i~~D~vv~a 283 (490)
T 1fec_A 229 ------------------FDSELRKQLTEQLRANGINVRTHENPAKVTKNAD-GT-RHVVF---ESGA--EADYDVVMLA 283 (490)
T ss_dssp ------------------SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT-SC-EEEEE---TTSC--EEEESEEEEC
T ss_pred ------------------cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CE-EEEEE---CCCc--EEEcCEEEEc
Confidence 0123344566777889999999999999987643 22 34443 3443 7899999999
Q ss_pred cCcChh
Q 008503 228 AGPFCD 233 (563)
Q Consensus 228 tG~~s~ 233 (563)
+|...+
T Consensus 284 ~G~~p~ 289 (490)
T 1fec_A 284 IGRVPR 289 (490)
T ss_dssp SCEEES
T ss_pred cCCCcC
Confidence 997654
No 236
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.85 E-value=3.2e-06 Score=89.24 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=32.9
Q ss_pred CccEEEECCchHHHHHHHHHHH-C------CCcEEEEeccCCC
Q 008503 71 PLDILVIGGGATGCGVALDAAT-R------GLRVGLVEREDFS 106 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~-~------G~~V~llEk~~~~ 106 (563)
.+||+|||||++|+.+|..|++ . |++|+|||+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5799999999999999999999 7 9999999998643
No 237
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.84 E-value=1.1e-05 Score=85.42 Aligned_cols=40 Identities=30% Similarity=0.511 Sum_probs=34.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
...+||+|||||++|+++|+.|++.|++|+|+|+++..+|
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 3468999999999999999999999999999999975444
No 238
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.83 E-value=6.2e-06 Score=87.08 Aligned_cols=38 Identities=21% Similarity=0.283 Sum_probs=33.2
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC--CcEEEEeccCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRG--LRVGLVEREDFS 106 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~~~~ 106 (563)
...+||+|||||++|+.+|..|++.| ++|+|||+.+..
T Consensus 4 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 4 EQTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 34589999999999999999999998 999999998643
No 239
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.82 E-value=0.0001 Score=79.06 Aligned_cols=96 Identities=21% Similarity=0.258 Sum_probs=75.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+....
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------------------------------------- 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------- 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc-------------------------------------------
Confidence 4799999999999999999999999999998742100
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHH-CCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAAL-AGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~-~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
+ ..+.+.+.+ .|+++++++.++++..++ +++.+|.+.+..+|+..++.++.||+|+|.
T Consensus 393 --------------~-----~~l~~~l~~~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 393 --------------D-----QVLQDKVRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp --------------C-----HHHHHHHTTCTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred --------------C-----HHHHHHHhcCCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 0 012333344 599999999999998764 588889888755676678999999999995
Q ss_pred C
Q 008503 231 F 231 (563)
Q Consensus 231 ~ 231 (563)
-
T Consensus 452 ~ 452 (521)
T 1hyu_A 452 L 452 (521)
T ss_dssp E
T ss_pred C
Confidence 3
No 240
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.81 E-value=0.00014 Score=77.12 Aligned_cols=101 Identities=20% Similarity=0.163 Sum_probs=74.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
..-.|+|||+|.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------~----------------------------- 218 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-----------A----------------------------- 218 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----------T-----------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-----------c-----------------------------
Confidence 345799999999999999999999999999999752100 0
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+..+...+.+.+++.|++++++++|+++..++ +.+ .+.+.+ .++ ..++.+|.||+|+|
T Consensus 219 ----------------~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~-~v~~~~-~~g-~~~~~~D~vi~a~G 277 (476)
T 3lad_A 219 ----------------VDEQVAKEAQKILTKQGLKILLGARVTGTEVKN--KQV-TVKFVD-AEG-EKSQAFDKLIVAVG 277 (476)
T ss_dssp ----------------SCHHHHHHHHHHHHHTTEEEEETCEEEEEEECS--SCE-EEEEES-SSE-EEEEEESEEEECSC
T ss_pred ----------------cCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEE-EEEEEe-CCC-cEEEECCEEEEeeC
Confidence 012234456666778999999999999998765 344 355543 222 35799999999999
Q ss_pred cC
Q 008503 230 PF 231 (563)
Q Consensus 230 ~~ 231 (563)
..
T Consensus 278 ~~ 279 (476)
T 3lad_A 278 RR 279 (476)
T ss_dssp EE
T ss_pred Cc
Confidence 64
No 241
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.81 E-value=0.00028 Score=75.65 Aligned_cols=104 Identities=19% Similarity=0.116 Sum_probs=72.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++++..+...
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~------------------------------------------ 247 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG------------------------------------------ 247 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT------------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc------------------------------------------
Confidence 34699999999999999999999999999998532110
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCC-CcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEAS-NRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~-g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+..+...+.+.+++.|+++++++.++.+...+++ .....+.+.+...++..++.+|.||+|+|
T Consensus 248 ---------------~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 248 ---------------FDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp ---------------SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred ---------------CCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecC
Confidence 01223345566677899999999998888764320 12223444442223335788999999999
Q ss_pred cC
Q 008503 230 PF 231 (563)
Q Consensus 230 ~~ 231 (563)
.-
T Consensus 313 ~~ 314 (519)
T 3qfa_A 313 RD 314 (519)
T ss_dssp EE
T ss_pred Cc
Confidence 63
No 242
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.80 E-value=1e-05 Score=82.89 Aligned_cols=39 Identities=21% Similarity=0.364 Sum_probs=34.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
++||+|||||++|+++|+.|++.|++|+|+|+++..+|.
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 379999999999999999999999999999998744443
No 243
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.80 E-value=1.7e-05 Score=84.43 Aligned_cols=41 Identities=32% Similarity=0.408 Sum_probs=36.0
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCC-CcEEEEeccCCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRG-LRVGLVEREDFSSGT 109 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G-~~V~llEk~~~~~g~ 109 (563)
...+||+|||||++|+++|+.|+++| .+|+|+|+++..+|.
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~ 48 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGL 48 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCe
Confidence 45789999999999999999999998 799999999744443
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.80 E-value=0.00013 Score=72.35 Aligned_cols=97 Identities=19% Similarity=0.187 Sum_probs=74.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|..|+-+|..|++.|.+|.++++.+....
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 184 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA------------------------------------------ 184 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS------------------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC------------------------------------------
Confidence 45799999999999999999999999999998742100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
++ . .+.+..++.|+++++++.|.++..++ +++.+|.+.. .+|+..++.+|.||+|+|.
T Consensus 185 ---------------~~-~---~~~~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~-~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 185 ---------------AP-S---TVEKVKKNEKIELITSASVDEVYGDK--MGVAGVKVKL-KDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp ---------------CH-H---HHHHHHHCTTEEEECSCEEEEEEEET--TEEEEEEEEC-TTSCEEEECCSCEEECSCE
T ss_pred ---------------CH-H---HHHHHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEc-CCCCeEEeecCeEEEEEcC
Confidence 00 0 11112246899999999999998765 5788888862 4666568999999999996
Q ss_pred C
Q 008503 231 F 231 (563)
Q Consensus 231 ~ 231 (563)
-
T Consensus 243 ~ 243 (315)
T 3r9u_A 243 N 243 (315)
T ss_dssp E
T ss_pred C
Confidence 4
No 245
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.79 E-value=6.8e-05 Score=79.63 Aligned_cols=103 Identities=20% Similarity=0.206 Sum_probs=73.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.... .
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-----------~------------------------------ 223 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-----------G------------------------------ 223 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----------T------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-----------c------------------------------
Confidence 45799999999999999999999999999999752100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|.++..+++ . ..|.+.+. .+...++.+|.||+|+|.
T Consensus 224 ---------------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~--~-~~v~~~~~-~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 224 ---------------ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKED--G-VYVTFEGA-NAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp ---------------SCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETT--E-EEEEEESS-SCCSSCEEESCEEECCCE
T ss_pred ---------------cCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCC--e-EEEEEecc-CCCceEEEcCEEEECcCC
Confidence 0112333556666788999999999999987642 2 34555421 111125789999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 285 ~p~ 287 (482)
T 1ojt_A 285 APN 287 (482)
T ss_dssp EEC
T ss_pred CcC
Confidence 543
No 246
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.78 E-value=0.00011 Score=78.17 Aligned_cols=98 Identities=17% Similarity=0.117 Sum_probs=72.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.....
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 232 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG----------------------------------------- 232 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-----------------------------------------
Confidence 457999999999999999999999999999997521100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.-+..+...+.+.+++.|++++++++|+++..+ +++..|.. ++ .++.+|.||+|+|.
T Consensus 233 --------------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~v~~v~~----~g--~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 233 --------------YYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGN---GKVEKIIT----DK--NEYDVDMVILAVGF 289 (490)
T ss_dssp --------------TSCHHHHHHHHHHHHTTTCEEEETCCEEEEECS---SSCCEEEE----SS--CEEECSEEEECCCE
T ss_pred --------------HHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcC---CcEEEEEE----CC--cEEECCEEEECCCC
Confidence 001223345666677899999999999999753 45544543 23 36899999999996
Q ss_pred Ch
Q 008503 231 FC 232 (563)
Q Consensus 231 ~s 232 (563)
..
T Consensus 290 ~p 291 (490)
T 2bc0_A 290 RP 291 (490)
T ss_dssp EE
T ss_pred Cc
Confidence 43
No 247
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.76 E-value=1.6e-05 Score=84.82 Aligned_cols=57 Identities=19% Similarity=0.109 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHCC-CEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcCh
Q 008503 168 SRLNVGLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G-~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s 232 (563)
..+...|.+.+.+.| ++|+++++|++|..++ +.+ .|.. .+|+ .++||.||+|+|.+.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v-~v~~---~~g~--~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNER--DAA-RVTA---RDGR--EFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECS--SSE-EEEE---TTCC--EEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC--CEE-EEEE---CCCC--EEEcCEEEECCCHHH
Confidence 356777888888888 9999999999998765 343 2332 3343 689999999999854
No 248
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.75 E-value=0.00022 Score=77.16 Aligned_cols=108 Identities=14% Similarity=0.095 Sum_probs=76.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+.....
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 189 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP----------------------------------------- 189 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-----------------------------------------
Confidence 358999999999999999999999999999997511000
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEc------------------CCCCcEEEEEEEECC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKD------------------EASNRIIGARIRNNL 212 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~------------------~~~g~v~gv~~~d~~ 212 (563)
.+..+...+.+.+++.|+++++++.|.++..+ .+ +++. +.. .
T Consensus 190 ---------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~---~ 249 (565)
T 3ntd_A 190 ---------------VDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLS-LTL---S 249 (565)
T ss_dssp ---------------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEE-EEE---T
T ss_pred ---------------cCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEE-EEE---c
Confidence 01223345566677899999999999999873 22 3442 332 3
Q ss_pred CCcEEEEEeCeEEEccCcChh-hhhhhhcC
Q 008503 213 SGKEFDTYAKVVVNAAGPFCD-SVRKLADQ 241 (563)
Q Consensus 213 ~g~~~~i~A~~VI~AtG~~s~-~l~~~~g~ 241 (563)
+|+ ++.+|.||+|+|...+ .+.+..|.
T Consensus 250 ~g~--~i~~D~vi~a~G~~p~~~l~~~~g~ 277 (565)
T 3ntd_A 250 NGE--LLETDLLIMAIGVRPETQLARDAGL 277 (565)
T ss_dssp TSC--EEEESEEEECSCEEECCHHHHHHTC
T ss_pred CCC--EEEcCEEEECcCCccchHHHHhCCc
Confidence 443 7999999999997654 24444443
No 249
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.75 E-value=2e-05 Score=84.23 Aligned_cols=39 Identities=31% Similarity=0.488 Sum_probs=35.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
..+||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 358999999999999999999999999999999975544
No 250
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.73 E-value=0.00018 Score=71.84 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=74.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+.... . .
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-----------~----~-------------------------- 193 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-----------H----E-------------------------- 193 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-----------C----H--------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-----------c----H--------------------------
Confidence 4799999999999999999999999999998742100 0 0
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
...+.+.+.|++++.++.|.++..++ .+.+|.+.+..+++..++.+|.||+|+|..
T Consensus 194 ---------------------~~~~~l~~~gv~~~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 194 ---------------------HSVENLHASKVNVLTPFVPAELIGED---KIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp ---------------------HHHHHHHHSSCEEETTEEEEEEECSS---SCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred ---------------------HHHHHHhcCCeEEEeCceeeEEecCC---ceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 01223567899999999999998654 355788877556666789999999999964
Q ss_pred h
Q 008503 232 C 232 (563)
Q Consensus 232 s 232 (563)
.
T Consensus 250 p 250 (332)
T 3lzw_A 250 S 250 (332)
T ss_dssp C
T ss_pred C
Confidence 4
No 251
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.69 E-value=0.00025 Score=75.51 Aligned_cols=107 Identities=21% Similarity=0.185 Sum_probs=75.1
Q ss_pred ccEEEECCchHHHHHHHHHHH----CCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhh
Q 008503 72 LDILVIGGGATGCGVALDAAT----RGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERK 147 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~----~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~ 147 (563)
-.|+|||||.+|+-+|..|++ .|.+|+++++.+.... .
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~------~-------------------------------- 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG------K-------------------------------- 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT------T--------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc------c--------------------------------
Confidence 479999999999999999987 4789999988641100 0
Q ss_pred hcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEc
Q 008503 148 QAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNA 227 (563)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~A 227 (563)
+-|..+...+.+.+++.|+++++++.|+++..++ +.+ .|.+ .+|+ ++.+|.||+|
T Consensus 223 -----------------~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l---~dG~--~i~aD~Vv~a 277 (493)
T 1m6i_A 223 -----------------ILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKL---KDGR--KVETDHIVAA 277 (493)
T ss_dssp -----------------TSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEE---TTSC--EEEESEEEEC
T ss_pred -----------------cCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEE---CCCC--EEECCEEEEC
Confidence 0012233455666778999999999999998654 343 4544 3453 7999999999
Q ss_pred cCcChhh-hhhhhcC
Q 008503 228 AGPFCDS-VRKLADQ 241 (563)
Q Consensus 228 tG~~s~~-l~~~~g~ 241 (563)
+|...+. +.+..|.
T Consensus 278 ~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 278 VGLEPNVELAKTGGL 292 (493)
T ss_dssp CCEEECCTTHHHHTC
T ss_pred CCCCccHHHHHHcCC
Confidence 9976542 4444444
No 252
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.68 E-value=2.9e-05 Score=80.02 Aligned_cols=39 Identities=26% Similarity=0.555 Sum_probs=34.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGT 109 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~ 109 (563)
++||+|||||++|+++|+.|++.|++|+|+|+++..+|.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCc
Confidence 479999999999999999999999999999998754443
No 253
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.68 E-value=0.00014 Score=73.01 Aligned_cols=97 Identities=26% Similarity=0.226 Sum_probs=71.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+.... + .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~----~--------~---------------------------- 194 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA----S--------K---------------------------- 194 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS----C--------T----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc----c--------H----------------------------
Confidence 35799999999999999999999999999998742100 0 0
Q ss_pred cCCcceEEEecCceechHHHHHHHH-HHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLA-LTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
.+. +..++.|++++++++|+++..++ ++.+|.+.+..+|+..++.+|.||+|+|
T Consensus 195 ----------------------~~~~~~~~~~gV~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2a87_A 195 ----------------------IMLDRARNNDKIRFLTNHTVVAVDGDT---TVTGLRVRDTNTGAETTLPVTGVFVAIG 249 (335)
T ss_dssp ----------------------THHHHHHHCTTEEEECSEEEEEEECSS---SCCEEEEEEETTSCCEEECCSCEEECSC
T ss_pred ----------------------HHHHHHhccCCcEEEeCceeEEEecCC---cEeEEEEEEcCCCceEEeecCEEEEccC
Confidence 011 11235899999999999997653 4556776643345446799999999999
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
.-.
T Consensus 250 ~~p 252 (335)
T 2a87_A 250 HEP 252 (335)
T ss_dssp EEE
T ss_pred Ccc
Confidence 643
No 254
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.67 E-value=6.1e-05 Score=80.34 Aligned_cols=35 Identities=14% Similarity=0.322 Sum_probs=32.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
....|||||||.+|+.+|..|.+.+++|+|||+++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 34579999999999999999999999999999985
No 255
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.65 E-value=0.00047 Score=73.97 Aligned_cols=97 Identities=20% Similarity=0.151 Sum_probs=72.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhh
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQ 148 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 148 (563)
...-.++|||||.+|+-.|..+++.|.+|+|+++..+-.+
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~---------------------------------------- 260 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG---------------------------------------- 260 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT----------------------------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc----------------------------------------
Confidence 3446799999999999999999999999999987532110
Q ss_pred cccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEcc
Q 008503 149 AKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAA 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~At 228 (563)
.+.++...+.+.+++.|+++++++.+..+...+ +.+ .|.. .++ ..+.+|.|++|+
T Consensus 261 -----------------~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~-~v~~---~~~--~~~~~D~vLvAv 315 (542)
T 4b1b_A 261 -----------------FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKI-LVEF---SDK--TSELYDTVLYAI 315 (542)
T ss_dssp -----------------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEE-EEEE---TTS--CEEEESEEEECS
T ss_pred -----------------cchhHHHHHHHHHHhhcceeecceEEEEEEecC--CeE-EEEE---cCC--CeEEEEEEEEcc
Confidence 012344466777888999999999999998875 333 2332 233 367899999999
Q ss_pred Cc
Q 008503 229 GP 230 (563)
Q Consensus 229 G~ 230 (563)
|-
T Consensus 316 GR 317 (542)
T 4b1b_A 316 GR 317 (542)
T ss_dssp CE
T ss_pred cc
Confidence 95
No 256
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.63 E-value=0.00011 Score=75.10 Aligned_cols=100 Identities=25% Similarity=0.309 Sum_probs=72.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||||.+|+-+|..|++.|.+|+++|+.+....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------------------------------------- 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-------------------------------------------
Confidence 4799999999999999999999999999999752100
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
-+..+...+.+.+++.|++++++++|+++. . . +|.+ .+| . +.+|.||+|+|..
T Consensus 181 --------------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~---~v~~---~~g--~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 181 --------------LDEELSNMIKDMLEETGVKFFLNSELLEAN--E--E---GVLT---NSG--F-IEGKVKICAIGIV 233 (367)
T ss_dssp --------------CCHHHHHHHHHHHHHTTEEEECSCCEEEEC--S--S---EEEE---TTE--E-EECSCEEEECCEE
T ss_pred --------------CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e--e---EEEE---CCC--E-EEcCEEEECcCCC
Confidence 011233355666778999999999999986 2 2 2433 233 3 9999999999965
Q ss_pred hhh-hhhhhcC
Q 008503 232 CDS-VRKLADQ 241 (563)
Q Consensus 232 s~~-l~~~~g~ 241 (563)
.+. +.+..|.
T Consensus 234 p~~~ll~~~gl 244 (367)
T 1xhc_A 234 PNVDLARRSGI 244 (367)
T ss_dssp ECCHHHHHTTC
T ss_pred cCHHHHHhCCC
Confidence 442 4444443
No 257
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.60 E-value=0.00034 Score=76.15 Aligned_cols=105 Identities=23% Similarity=0.213 Sum_probs=75.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------~------------------------------- 225 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP----------P------------------------------- 225 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT----------T-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc----------c-------------------------------
Confidence 45799999999999999999999999999998742100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+.+++.|++++++++|.++..++ + +|.+ .+++ ++.+|.||+|+|.
T Consensus 226 ---------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~---~v~~---~~g~--~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 226 ---------------IDYEMAAYVHEHMKNHDVELVFEDGVDALEENG--A---VVRL---KSGS--VIQTDMLILAIGV 280 (588)
T ss_dssp ---------------SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--T---EEEE---TTSC--EEECSEEEECSCE
T ss_pred ---------------CCHHHHHHHHHHHHHcCCEEEECCeEEEEecCC--C---EEEE---CCCC--EEEcCEEEEccCC
Confidence 012234456667778999999999999997653 2 3443 3443 7899999999997
Q ss_pred Chhh-hhhhhcC
Q 008503 231 FCDS-VRKLADQ 241 (563)
Q Consensus 231 ~s~~-l~~~~g~ 241 (563)
..+. +.+..|.
T Consensus 281 ~p~~~~l~~~g~ 292 (588)
T 3ics_A 281 QPESSLAKGAGL 292 (588)
T ss_dssp EECCHHHHHTTC
T ss_pred CCChHHHHhcCc
Confidence 6542 3333443
No 258
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.60 E-value=3.8e-05 Score=81.86 Aligned_cols=39 Identities=28% Similarity=0.524 Sum_probs=35.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 468999999999999999999999999999999874444
No 259
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.58 E-value=3.9e-05 Score=79.34 Aligned_cols=32 Identities=28% Similarity=0.529 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHHCC--CcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRG--LRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~~ 104 (563)
.|||||||++|+++|..|.+.+ ++|+|||+++
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 5999999999999999998875 6899999985
No 260
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.58 E-value=0.00092 Score=72.91 Aligned_cols=102 Identities=19% Similarity=0.103 Sum_probs=69.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||||.+|+-+|..|++.|.+|+++++..+...
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~------------------------------------------- 323 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSILLRG------------------------------------------- 323 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcCc-------------------------------------------
Confidence 4799999999999999999999999999998622110
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEc-----CC--CCcEEEEEEEECCCCcEEEEEeCeE
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKD-----EA--SNRIIGARIRNNLSGKEFDTYAKVV 224 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~-----~~--~g~v~gv~~~d~~~g~~~~i~A~~V 224 (563)
+ +..+...+.+.+++.|+++++++.+..+... ++ .+++ .+.+.. .+|+...+.+|.|
T Consensus 324 -------------~-d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~-~~g~~~~~~~D~v 387 (598)
T 2x8g_A 324 -------------F-DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHY-TDGKKFEEEFETV 387 (598)
T ss_dssp -------------S-CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEE-TTSCEEEEEESEE
T ss_pred -------------C-CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceE-EEEEEe-CCCcEEeccCCEE
Confidence 0 0112234455567789999999988888642 11 0233 233322 3455455679999
Q ss_pred EEccCcCh
Q 008503 225 VNAAGPFC 232 (563)
Q Consensus 225 I~AtG~~s 232 (563)
|+|+|.-.
T Consensus 388 i~a~G~~p 395 (598)
T 2x8g_A 388 IFAVGREP 395 (598)
T ss_dssp EECSCEEE
T ss_pred EEEeCCcc
Confidence 99999643
No 261
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.54 E-value=5.8e-05 Score=76.48 Aligned_cols=33 Identities=27% Similarity=0.356 Sum_probs=31.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
+||+|||||.+|+.+|+.|+++|++|+|+|+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 699999999999999999999999999999975
No 262
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.54 E-value=0.00056 Score=67.69 Aligned_cols=97 Identities=23% Similarity=0.236 Sum_probs=72.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||||.+|+-+|..|++.|.+|+|+++.+.... .
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~--------------------------~---------------- 190 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA--------------------------S---------------- 190 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS--------------------------C----------------
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc--------------------------c----------------
Confidence 5799999999999999999999999999998642100 0
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
.. ...+.....+.+.+..+.+..+...+ ....++.+.+..+++...+.+|.||+|+|.-
T Consensus 191 ----------------~~---~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 191 ----------------KT---MQERVLNHPKIEVIWNSELVELEGDG--DLLNGAKIHNLVSGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp ----------------HH---HHHHHHTCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ----------------ch---hhhhhhcccceeeEeeeeeEEEEeee--eccceeEEeecccccceeeccccceEecccc
Confidence 00 11122234577888888888887765 4677888877666777789999999999963
No 263
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.47 E-value=0.00026 Score=75.42 Aligned_cols=99 Identities=20% Similarity=0.207 Sum_probs=68.0
Q ss_pred cEEEECCchHHHHHHHHHHHC--------------CCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHH
Q 008503 73 DILVIGGGATGCGVALDAATR--------------GLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKL 138 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~--------------G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 138 (563)
.++|||||++|+-+|.+|++. ..+|+|||..+.-..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~------------------------------ 268 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN------------------------------ 268 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc------------------------------
Confidence 599999999999999998764 367999999852110
Q ss_pred HHHHHHHhhhcccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCc--E
Q 008503 139 VFHALEERKQAKDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGK--E 216 (563)
Q Consensus 139 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~--~ 216 (563)
.-+..+...+.+.+++.|+++++++.|+++..+ +.+..+ .. .+|+ .
T Consensus 269 --------------------------~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~--~~-~dg~~~~ 316 (502)
T 4g6h_A 269 --------------------------MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKT--KH-EDGKITE 316 (502)
T ss_dssp --------------------------TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEE--EC-TTSCEEE
T ss_pred --------------------------CCCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEE--Ee-cCcccce
Confidence 002234445667778899999999999998533 122112 11 2332 2
Q ss_pred EEEEeCeEEEccCcChh
Q 008503 217 FDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 217 ~~i~A~~VI~AtG~~s~ 233 (563)
.+|.++.||.|+|.-..
T Consensus 317 ~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 317 ETIPYGTLIWATGNKAR 333 (502)
T ss_dssp EEEECSEEEECCCEECC
T ss_pred eeeccCEEEEccCCcCC
Confidence 46999999999996443
No 264
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.46 E-value=8.9e-05 Score=78.46 Aligned_cols=39 Identities=23% Similarity=0.424 Sum_probs=33.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~~g 108 (563)
..+||+|||||++|+++|+.|++.|+ +|+|+|+++..+|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 46899999999999999999999999 8999999864444
No 265
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.46 E-value=0.00036 Score=73.03 Aligned_cols=93 Identities=19% Similarity=0.212 Sum_probs=68.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-.|..+++.|.+|+|+|+.+.-...
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~----------------------------------------- 185 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL----------------------------------------- 185 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-----------------------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-----------------------------------------
Confidence 357999999999999999999999999999997521100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
.+..+...+.+..++.|++++++++|.++..+ . |.+ .+++ ++.+|.||+|+|.
T Consensus 186 ---------------~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~----~---v~~---~~g~--~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 186 ---------------MDADMNQPILDELDKREIPYRLNEEINAINGN----E---ITF---KSGK--VEHYDMIIEGVGT 238 (437)
T ss_dssp ---------------SCGGGGHHHHHHHHHTTCCEEESCCEEEEETT----E---EEE---TTSC--EEECSEEEECCCE
T ss_pred ---------------ccchhHHHHHHHhhccceEEEeccEEEEecCC----e---eee---cCCe--EEeeeeEEEEece
Confidence 00111224556677899999999999887422 2 333 4454 6899999999996
Q ss_pred C
Q 008503 231 F 231 (563)
Q Consensus 231 ~ 231 (563)
-
T Consensus 239 ~ 239 (437)
T 4eqs_A 239 H 239 (437)
T ss_dssp E
T ss_pred e
Confidence 4
No 266
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.42 E-value=0.00025 Score=74.64 Aligned_cols=98 Identities=24% Similarity=0.320 Sum_probs=68.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
-+|+|||||.+|+-+|..+.+.|. +|+++++.+... + +.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~---------~-p~------------------------------ 304 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKN---------M-PG------------------------------ 304 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTT---------C-SS------------------------------
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccC---------C-CC------------------------------
Confidence 479999999999999999999998 499998874210 0 00
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEEC------C---------CCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNN------L---------SGK 215 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~------~---------~g~ 215 (563)
.+.+ .+.+.+.|+++++++.++++..+ ++|.+|.+.+. . +|.
T Consensus 305 ---------------~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~---g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~ 361 (456)
T 2vdc_G 305 ---------------SQRE-----VAHAEEEGVEFIWQAAPEGFTGD---TVVTGVRAVRIHLGVADATGRQTPQVIEGS 361 (456)
T ss_dssp ---------------CHHH-----HHHHHHTTCEEECCSSSCCEEEE---EEEETTEEEEEEEEEEEECTTCCEEEEEEE
T ss_pred ---------------CHHH-----HHHHHHCCCEEEeCCCceEEeCC---CcEEEEEEEEEEecccCCcCCccccccCCc
Confidence 0000 23456789999999999888753 46655544310 1 233
Q ss_pred EEEEEeCeEEEccCcCh
Q 008503 216 EFDTYAKVVVNAAGPFC 232 (563)
Q Consensus 216 ~~~i~A~~VI~AtG~~s 232 (563)
..++.+|.||+|+|...
T Consensus 362 ~~~i~aD~Vi~A~G~~p 378 (456)
T 2vdc_G 362 EFTVQADLVIKALGFEP 378 (456)
T ss_dssp EEEEECSEEEECSCEEC
T ss_pred EEEEECCEEEECCCCCC
Confidence 45799999999999744
No 267
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.37 E-value=0.00069 Score=71.32 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=39.0
Q ss_pred CCCEEEcCcEEEEEEEcCCCC-cEEEEEEEECC------------CCcEEEEEeCeEEEccCcChh
Q 008503 181 AGAAVLNHAEVISLIKDEASN-RIIGARIRNNL------------SGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 181 ~G~~i~~~~~v~~l~~~~~~g-~v~gv~~~d~~------------~g~~~~i~A~~VI~AtG~~s~ 233 (563)
.|+++++++.+++|..+++ + ++.+|++.+.. +|+..++.++.||.|+|.-..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 7899999999999987643 4 78778765311 344457999999999997543
No 268
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.37 E-value=0.0006 Score=71.55 Aligned_cols=106 Identities=18% Similarity=0.151 Sum_probs=73.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+.....
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 186 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR----------------------------------------- 186 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-----------------------------------------
Confidence 358999999999999999999999999999997521100
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+.+++. +++++++.|.++..++ ++..+. .++ .++.+|.||+|+|.
T Consensus 187 --------------~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~----~~g--~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 187 --------------SFDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVV----TDA--GEYKAELVILATGI 242 (449)
T ss_dssp --------------TSCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEE----ETT--EEEECSEEEECSCE
T ss_pred --------------hcCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEE----eCC--CEEECCEEEEeeCC
Confidence 00122333455556667 9999999999987543 343332 233 47999999999997
Q ss_pred Chh-hhhhhhcC
Q 008503 231 FCD-SVRKLADQ 241 (563)
Q Consensus 231 ~s~-~l~~~~g~ 241 (563)
..+ .+.+..|.
T Consensus 243 ~p~~~l~~~~gl 254 (449)
T 3kd9_A 243 KPNIELAKQLGV 254 (449)
T ss_dssp EECCHHHHHTTC
T ss_pred ccCHHHHHhCCc
Confidence 643 23444443
No 269
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.34 E-value=0.00085 Score=77.80 Aligned_cols=97 Identities=25% Similarity=0.276 Sum_probs=70.6
Q ss_pred cEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 73 DILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
.|+|||||.+|+-+|..+.+.|. +|+++++.+... + +.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~---------~-~~------------------------------- 372 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVN---------I-RA------------------------------- 372 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGG---------C-CS-------------------------------
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhh---------C-CC-------------------------------
Confidence 79999999999999999999997 899999874100 0 00
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEEC---CC-------CcEEEEEe
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNN---LS-------GKEFDTYA 221 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~---~~-------g~~~~i~A 221 (563)
.+.. .+.+++.|+++++++.+.++..++ ++|.+|.+.+. .+ |...++.+
T Consensus 373 --------------~~~e-----~~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~a 431 (1025)
T 1gte_A 373 --------------VPEE-----VELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKA 431 (1025)
T ss_dssp --------------CHHH-----HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred --------------CHHH-----HHHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEEC
Confidence 0001 134567899999999999998653 68887776421 11 22357899
Q ss_pred CeEEEccCcC
Q 008503 222 KVVVNAAGPF 231 (563)
Q Consensus 222 ~~VI~AtG~~ 231 (563)
|.||+|+|.-
T Consensus 432 D~Vi~A~G~~ 441 (1025)
T 1gte_A 432 DVVISAFGSV 441 (1025)
T ss_dssp SEEEECSCEE
T ss_pred CEEEECCCCC
Confidence 9999999973
No 270
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.32 E-value=0.00018 Score=80.45 Aligned_cols=40 Identities=25% Similarity=0.411 Sum_probs=35.3
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
...+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGG 426 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 3468999999999999999999999999999999864433
No 271
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.27 E-value=0.0002 Score=79.18 Aligned_cols=39 Identities=28% Similarity=0.488 Sum_probs=35.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 458999999999999999999999999999999864443
No 272
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.26 E-value=0.0015 Score=68.91 Aligned_cols=102 Identities=20% Similarity=0.187 Sum_probs=68.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+.... .
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------~------------------------------- 210 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI----------T------------------------------- 210 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT----------T-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC----------C-------------------------------
Confidence 35799999999999999999999999999999751100 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
..+..+...+.+... ++++++++|+++..+++ +.+ .|.+.+ .+|+..++.+|.||+|+|.
T Consensus 211 --------------~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~-~~v-~v~~~~-~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 211 --------------LEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKD-DEY-EVIYST-KDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp --------------SCCHHHHHHHHHHHC---CCEECSCCEEEEEEEET-TEE-EEEECC-TTSCCEEEEESCEEECCCE
T ss_pred --------------CCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCC-CcE-EEEEEe-cCCceEEEEcCEEEECcCC
Confidence 000111122222222 99999999999987642 233 244321 1454457999999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
..+
T Consensus 271 ~p~ 273 (466)
T 3l8k_A 271 RPV 273 (466)
T ss_dssp EEC
T ss_pred Ccc
Confidence 543
No 273
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.24 E-value=0.0017 Score=65.79 Aligned_cols=106 Identities=15% Similarity=0.066 Sum_probs=67.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+...... ...
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~------~d~-------------------------------- 208 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD------ADP-------------------------------- 208 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------------C--------------------------------
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC------CCC--------------------------------
Confidence 479999999999999999999999999999874210000 000
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCC-CEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAG-AAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G-~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
...-+..+...+.+..++.| +++++++.|.++..++ +. ..|.+ .+|+ ....++.||.|+|.
T Consensus 209 -----------~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~-~~v~~---~~g~-~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 209 -----------SVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN--GQ-YHISF---DSGQ-SVHTPHEPILATGF 270 (369)
T ss_dssp -----------TTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEET--TE-EEEEE---SSSC-CEEESSCCEECCCB
T ss_pred -----------CccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecC--Cc-eEEEe---cCCe-EeccCCceEEeecc
Confidence 00011223334555566786 9999999999997654 22 23444 3443 22345999999997
Q ss_pred Chh
Q 008503 231 FCD 233 (563)
Q Consensus 231 ~s~ 233 (563)
-.+
T Consensus 271 ~~~ 273 (369)
T 3d1c_A 271 DAT 273 (369)
T ss_dssp CGG
T ss_pred CCc
Confidence 544
No 274
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.23 E-value=0.00024 Score=80.14 Aligned_cols=39 Identities=28% Similarity=0.488 Sum_probs=34.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
..+||+|||||++|+++|+.|+++|++|+|+|+.+..+|
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 457999999999999999999999999999999874444
No 275
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.18 E-value=0.00092 Score=76.97 Aligned_cols=94 Identities=19% Similarity=0.172 Sum_probs=72.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||+|.+|+-+|..|++.|.+|+|||+.+...
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------------- 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------------- 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC--------------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc--------------------------------------------
Confidence 479999999999999999999999999999974110
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEE--CC--CCcEEEEEeCeEEEc
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRN--NL--SGKEFDTYAKVVVNA 227 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d--~~--~g~~~~i~A~~VI~A 227 (563)
+. .+.+++.|+++++++.|+++..+++ +++.+|++.+ .. +|+..++.+|.||+|
T Consensus 321 ---------------~~------~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a 378 (965)
T 2gag_A 321 ---------------AA------AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVA 378 (965)
T ss_dssp ---------------HH------HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEE
T ss_pred ---------------hh------HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEEC
Confidence 00 2335678999999999999987412 5788888764 11 233367999999999
Q ss_pred cCcC
Q 008503 228 AGPF 231 (563)
Q Consensus 228 tG~~ 231 (563)
+|.-
T Consensus 379 ~G~~ 382 (965)
T 2gag_A 379 GGFN 382 (965)
T ss_dssp CCEE
T ss_pred CCcC
Confidence 9953
No 276
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.98 E-value=0.0019 Score=67.90 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=36.5
Q ss_pred CCCEEEcCcEEEEEEEcCCCCcEEEEEEEEC-------------CCCcEEEEEeCeEEEccCcChh
Q 008503 181 AGAAVLNHAEVISLIKDEASNRIIGARIRNN-------------LSGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 181 ~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~-------------~~g~~~~i~A~~VI~AtG~~s~ 233 (563)
.|+++++++.+.++..+ +++.+|.+.+. .+|+..++.++.||.|+|....
T Consensus 265 ~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~ 327 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGV 327 (456)
T ss_dssp EEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECC
T ss_pred ceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccC
Confidence 78999999999999754 45666666421 1344457999999999997543
No 277
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.97 E-value=0.00033 Score=71.97 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=63.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.....
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------------------ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER------------------------------------------ 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh------------------------------------------
Confidence 47999999999999999999999999999998521100
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
.-+..+...+.+.+++.|+++++++.|.++ + .++.+|.||+|+|..
T Consensus 185 -------------~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------------g--~~~~~D~vv~a~G~~ 230 (385)
T 3klj_A 185 -------------QLDRDGGLFLKDKLDRLGIKIYTNSNFEEM-------------------G--DLIRSSCVITAVGVK 230 (385)
T ss_dssp -------------TSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------------H--HHHHHSEEEECCCEE
T ss_pred -------------hcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------------C--eEEecCeEEECcCcc
Confidence 001122334556667889999999887654 1 147799999999975
Q ss_pred hh
Q 008503 232 CD 233 (563)
Q Consensus 232 s~ 233 (563)
.+
T Consensus 231 p~ 232 (385)
T 3klj_A 231 PN 232 (385)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 278
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.96 E-value=0.00058 Score=79.16 Aligned_cols=38 Identities=21% Similarity=0.431 Sum_probs=34.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFSSG 108 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~~g 108 (563)
.+||+|||||++|+++|+.|++.|+ +|+|+|+.+..+|
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG 225 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGG 225 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCST
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCc
Confidence 5799999999999999999999999 7999999864444
No 279
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.93 E-value=0.0072 Score=59.63 Aligned_cols=98 Identities=15% Similarity=0.092 Sum_probs=66.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhccc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAKD 151 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 151 (563)
-.|+|||||.+|+-+|..|++.|.+|+|+|+.+.... . ..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~----------~---------------~~--------------- 185 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA----------Q---------------RI--------------- 185 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS----------C---------------HH---------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc----------c---------------hh---------------
Confidence 4799999999999999999999999999998752100 0 00
Q ss_pred CCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcC
Q 008503 152 RSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPF 231 (563)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~ 231 (563)
.......+.++.+.....+..+...+ ............++....+.++.|+.+.|.-
T Consensus 186 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~ 242 (312)
T 4gcm_A 186 ---------------------LQDRAFKNDKIDFIWSHTLKSINEKD--GKVGSVTLTSTKDGSEETHEADGVFIYIGMK 242 (312)
T ss_dssp ---------------------HHHHHHHCTTEEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ---------------------HHHHHHHhcCcceeeecceeeeeccc--cccccceeeeecCCceeEEeeeeEEeecCCC
Confidence 01122334567777777776666553 2333333333355666789999999999974
Q ss_pred h
Q 008503 232 C 232 (563)
Q Consensus 232 s 232 (563)
.
T Consensus 243 ~ 243 (312)
T 4gcm_A 243 P 243 (312)
T ss_dssp E
T ss_pred c
Confidence 4
No 280
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.77 E-value=0.0011 Score=71.97 Aligned_cols=57 Identities=16% Similarity=0.104 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 168 SRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 168 ~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
..+..+|.+.+...|++++++++|.+|..+++.|+++||+. .+|+ .+.|+.||....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~---~~Ge--~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVID---QFGQ--RIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEE---TTSC--EEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEe---CCCC--EEEcCEEEEChh
Confidence 46788899999999999999999999987653257888863 3454 689999887444
No 281
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.72 E-value=0.0026 Score=71.04 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=30.9
Q ss_pred ccEEEEC--CchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIG--GGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIG--aGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-.|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999875
No 282
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.69 E-value=0.0006 Score=75.00 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=32.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCC--------CcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRG--------LRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G--------~~V~llEk~~ 104 (563)
..+|+|||||++|+++|+.|++.| ++|+|+|+.+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 468999999999999999999999 9999999986
No 283
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.63 E-value=0.0056 Score=59.64 Aligned_cols=85 Identities=12% Similarity=0.032 Sum_probs=63.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhcc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQAK 150 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 150 (563)
...|+|||+|.+|+-+|..|++.| +|.++++.+.. +
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----------~--------------------------------- 176 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----------P--------------------------------- 176 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----------C---------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----------C---------------------------------
Confidence 458999999999999999999999 99999876420 0
Q ss_pred cCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCc
Q 008503 151 DRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGP 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~ 230 (563)
. ..+.+.+.+.|+++++ ++|.++..+ + .|.+ .+++ ++.+|.||.|+|.
T Consensus 177 ---------------~-----~~~~~~l~~~gv~i~~-~~v~~i~~~---~---~v~~---~~g~--~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 177 ---------------D-----ADQHALLAARGVRVET-TRIREIAGH---A---DVVL---ADGR--SIALAGLFTQPKL 224 (297)
T ss_dssp ---------------C-----HHHHHHHHHTTCEEEC-SCEEEEETT---E---EEEE---TTSC--EEEESEEEECCEE
T ss_pred ---------------C-----HHHHHHHHHCCcEEEc-ceeeeeecC---C---eEEe---CCCC--EEEEEEEEEccCc
Confidence 0 0234455678999996 889888643 2 3444 3443 6899999999996
Q ss_pred C
Q 008503 231 F 231 (563)
Q Consensus 231 ~ 231 (563)
.
T Consensus 225 ~ 225 (297)
T 3fbs_A 225 R 225 (297)
T ss_dssp E
T ss_pred c
Confidence 4
No 284
>2pq4_B Periplasmic nitrate reductase precursor; NAPD/NAPA1-35, mixed beta-alpha sandwich structure, protein- peptide complex, alpha-helix; NMR {Escherichia coli}
Probab=96.43 E-value=0.0012 Score=41.91 Aligned_cols=18 Identities=39% Similarity=0.350 Sum_probs=13.7
Q ss_pred CcchhhhhhhHHHHHHhh
Q 008503 1 MSATRIRRFGAVLAAAAG 18 (563)
Q Consensus 1 ~srR~f~~~~~~~~a~~a 18 (563)
||||+|||+.++++++++
T Consensus 3 lsRR~FLK~~aaa~Aaaa 20 (35)
T 2pq4_B 3 LSRRSFMKANAVAAAAAA 20 (35)
T ss_dssp CCSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 689999998876665544
No 285
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.97 E-value=0.0046 Score=66.43 Aligned_cols=33 Identities=30% Similarity=0.316 Sum_probs=31.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-.|+|||+|.+|+-+|..|++.+.+|+|+++.+
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~ 218 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTP 218 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCC
Confidence 479999999999999999999999999999985
No 286
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.70 E-value=0.023 Score=60.91 Aligned_cols=34 Identities=26% Similarity=0.232 Sum_probs=31.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 211 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTP 211 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 3579999999999999999999999999999985
No 287
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.55 E-value=0.045 Score=56.69 Aligned_cols=53 Identities=13% Similarity=0.034 Sum_probs=38.4
Q ss_pred HHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChh
Q 008503 173 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCD 233 (563)
Q Consensus 173 ~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~ 233 (563)
.+.+.+++.|+++++++.|+++..+ . +.+.+ .+++..++.+|.||+|+|....
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~~~----~---v~~~~-~~~~g~~i~~D~vv~a~G~~~~ 257 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIEPD----K---VIYED-LNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSS----E---EEEEC-TTSCEEEEECSEEEEECEEECC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeCC----e---EEEEe-cCCCceEEeeeEEEECCCCccc
Confidence 4556677899999999999998532 2 44443 2244568999999999996543
No 288
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.14 E-value=0.023 Score=49.82 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=31.8
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
....|+|||+|..|..+|..|.+.|.+|+++|++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34579999999999999999999999999999873
No 289
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.12 E-value=0.11 Score=54.03 Aligned_cols=52 Identities=12% Similarity=0.025 Sum_probs=35.5
Q ss_pred HHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEEC-CCCc---EEEEEeCeEEEccCcC
Q 008503 173 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNN-LSGK---EFDTYAKVVVNAAGPF 231 (563)
Q Consensus 173 ~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~-~~g~---~~~i~A~~VI~AtG~~ 231 (563)
.+.+.+++.|+++++++.|+++..+ . +.+.+. .+++ ..++.+|.||.|+|.-
T Consensus 213 ~~~~~l~~~gI~~~~~~~v~~v~~~----~---v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 213 ILTKGLKEEGIEAYTNCKVTKVEDN----K---MYVTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEETT----E---EEEEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHCCCEEEcCCEEEEEECC----e---EEEEecccCCccccceEEEEeEEEEcCCCc
Confidence 4455667899999999999998532 2 233221 2232 4579999999999843
No 290
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.99 E-value=0.099 Score=53.63 Aligned_cols=55 Identities=9% Similarity=0.024 Sum_probs=39.5
Q ss_pred HHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhh
Q 008503 171 NVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRK 237 (563)
Q Consensus 171 ~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~ 237 (563)
...+.+.+++.|++++++++|+++..+ . |++ .+|+ ++.+|.||+|+|.....+..
T Consensus 221 ~~~~~~~l~~~gV~~~~~~~v~~i~~~----~---v~~---~~g~--~~~~D~vi~a~G~~~~~~l~ 275 (409)
T 3h8l_A 221 RKAVASIYNQLGIKLVHNFKIKEIREH----E---IVD---EKGN--TIPADITILLPPYTGNPALK 275 (409)
T ss_dssp HHHHHHHHHHHTCEEECSCCEEEECSS----E---EEE---TTSC--EEECSEEEEECCEECCHHHH
T ss_pred HHHHHHHHHHCCCEEEcCCceEEECCC----e---EEE---CCCC--EEeeeEEEECCCCCccHHHH
Confidence 345566677889999999999988532 2 433 3443 79999999999976654433
No 291
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.81 E-value=0.028 Score=47.82 Aligned_cols=32 Identities=22% Similarity=0.434 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|||+|..|..+|..|.+.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 47999999999999999999999999999986
No 292
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.72 E-value=0.04 Score=47.35 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3479999999999999999999999999999973
No 293
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.70 E-value=0.033 Score=47.82 Aligned_cols=32 Identities=28% Similarity=0.526 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|+|+|..|..+|..|.+.|++|+++|++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 36999999999999999999999999999986
No 294
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.63 E-value=0.033 Score=45.81 Aligned_cols=32 Identities=25% Similarity=0.369 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCC-CcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRG-LRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G-~~V~llEk~ 103 (563)
..|+|+|+|..|..++..|.+.| ++|++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 47999999999999999999999 999999986
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.17 E-value=0.06 Score=46.94 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
-.|+|||+|..|...|..|.+.|++|+++|++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 46999999999999999999999999999996
No 296
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.10 E-value=0.041 Score=54.46 Aligned_cols=32 Identities=38% Similarity=0.547 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
-.|.|||+|..|..+|..++..|++|+|+|..
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 46999999999999999999999999999986
No 297
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=93.96 E-value=0.11 Score=50.82 Aligned_cols=90 Identities=8% Similarity=-0.026 Sum_probs=59.8
Q ss_pred CccEEEECCch-HHHHHHHHHHHCCCcEEEEeccCCCCCCccCCCCccccchhhHHHHhhccCcccHHHHHHHHHHhhhc
Q 008503 71 PLDILVIGGGA-TGCGVALDAATRGLRVGLVEREDFSSGTSSRSTKLIHGGVRYLEKAVFNLDYGQLKLVFHALEERKQA 149 (563)
Q Consensus 71 ~~DVvIIGaGi-aG~~~A~~la~~G~~V~llEk~~~~~g~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 149 (563)
.-.++|||||. .++.+|..+.+.|.+|+++++.+...
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~------------------------------------------ 183 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS------------------------------------------ 183 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC------------------------------------------
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch------------------------------------------
Confidence 34688888775 56788888888899999997753110
Q ss_pred ccCCcceEEEecCceechHHHHHHHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccC
Q 008503 150 KDRSLKGAVVYYDGQMNDSRLNVGLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAG 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG 229 (563)
..+.+.+.+.|+.+++++ +..+..++ +++.+|.+ .+++ ++.++.||+++|
T Consensus 184 ----------------------~~~~~~l~~~g~~~~~~~-v~~~~~~~--~~~~~v~~---~~g~--~i~~~~~vi~~g 233 (304)
T 4fk1_A 184 ----------------------QTIMDELSNKNIPVITES-IRTLQGEG--GYLKKVEF---HSGL--RIERAGGFIVPT 233 (304)
T ss_dssp ----------------------HHHHHHHHTTTCCEECSC-EEEEESGG--GCCCEEEE---TTSC--EECCCEEEECCE
T ss_pred ----------------------hhhhhhhhccceeEeeee-EEEeecCC--Ceeeeeec---cccc--eeeecceeeeec
Confidence 022344556788988864 66666554 56666765 3453 678888888877
Q ss_pred cCh
Q 008503 230 PFC 232 (563)
Q Consensus 230 ~~s 232 (563)
...
T Consensus 234 ~~~ 236 (304)
T 4fk1_A 234 FFR 236 (304)
T ss_dssp EEC
T ss_pred ccc
Confidence 543
No 298
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=93.81 E-value=0.071 Score=53.03 Aligned_cols=33 Identities=18% Similarity=0.494 Sum_probs=29.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||+|.+|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 357999999999999999999998 799998873
No 299
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.50 E-value=0.072 Score=52.35 Aligned_cols=31 Identities=45% Similarity=0.684 Sum_probs=29.8
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|..+|..|++.|++|+++|++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 5999999999999999999999999999987
No 300
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.33 E-value=0.072 Score=45.42 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=29.6
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|+|+|+|..|..+|..|.+.|++|+++|++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999986
No 301
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=92.99 E-value=0.72 Score=47.54 Aligned_cols=60 Identities=15% Similarity=0.039 Sum_probs=42.3
Q ss_pred HHHHHHHHCCCEEEcCcEEEEEEEcCCCCcEEEEEEEECCCCcEEEEEeCeEEEccCcChhhhhhhhc
Q 008503 173 GLALTAALAGAAVLNHAEVISLIKDEASNRIIGARIRNNLSGKEFDTYAKVVVNAAGPFCDSVRKLAD 240 (563)
Q Consensus 173 ~l~~~a~~~G~~i~~~~~v~~l~~~~~~g~v~gv~~~d~~~g~~~~i~A~~VI~AtG~~s~~l~~~~g 240 (563)
.+.+..++.|+++++++.|+++..+ + +.+.+ .++...++.+|.||.|+|.-...+....+
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~~~----~---~~~~~-~~g~~~~i~~d~vi~~~G~~~~~~~~~~~ 264 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIEPD----K---VIYED-LNGNTHEVPAKFTMFMPSFQGPEVVASAG 264 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSS----E---EEEEC-TTSCEEEEECSEEEEECEEECCHHHHTTC
T ss_pred HHHHHHHhCCeEEEeCceEEEEeCC----c---eEEEe-eCCCceEeecceEEEeccCCCchHHHhcc
Confidence 3445567899999999999988532 2 34444 45666789999999999976555544333
No 302
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.85 E-value=0.1 Score=46.86 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHHC-CCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATR-GLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~-G~~V~llEk~ 103 (563)
.-.|+|||+|..|..+|..|.+. |++|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 34799999999999999999999 9999999987
No 303
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=92.72 E-value=1.6 Score=45.92 Aligned_cols=33 Identities=27% Similarity=0.488 Sum_probs=29.3
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~ 104 (563)
..|+|||+|.+|+-++.+|+++ +.+|.++-|..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 4699999999999999999875 78999998874
No 304
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.57 E-value=0.11 Score=48.34 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=30.1
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999873
No 305
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.54 E-value=0.1 Score=50.75 Aligned_cols=32 Identities=25% Similarity=0.465 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|..+|..+++.|++|+++|++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 36999999999999999999999999999987
No 306
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.26 E-value=0.11 Score=51.35 Aligned_cols=32 Identities=38% Similarity=0.547 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|.+.|..+++.|++|+++|++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999987
No 307
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.99 E-value=0.13 Score=51.25 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=31.7
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
.....|+|||+|..|.++|..|+..|+ +|+|+|.+
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 344679999999999999999999998 99999987
No 308
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.72 E-value=0.15 Score=50.05 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=30.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|.|||.|..|...|..|++.|++|++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 3457999999999999999999999999999886
No 309
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.51 E-value=0.071 Score=55.48 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|.|||+|..|..+|..+++.|++|+++|++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 469999999999999999999999999999873
No 310
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.42 E-value=0.18 Score=50.74 Aligned_cols=35 Identities=31% Similarity=0.413 Sum_probs=31.9
Q ss_pred CCCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 69 SNPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
+....|.|||+|..|.+.|..|++.|++|.+++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34468999999999999999999999999999986
No 311
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.29 E-value=0.17 Score=50.11 Aligned_cols=32 Identities=44% Similarity=0.510 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|||+|..|.+.|..|++.|.+|.+++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46999999999999999999999999999986
No 312
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.05 E-value=0.17 Score=49.85 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=29.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|.+.|..|++.|.+|.+++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 36999999999999999999999999999886
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.93 E-value=0.19 Score=46.83 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=31.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|+|||||-+|...+..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4567999999999999999999999999999875
No 314
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=90.87 E-value=0.18 Score=53.26 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 4579999999999999999999999999999985
No 315
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.84 E-value=0.2 Score=49.39 Aligned_cols=32 Identities=38% Similarity=0.597 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
..|+|||+|..|...|..|++.|+ +|+++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 579999999999999999999999 99999986
No 316
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.83 E-value=0.12 Score=49.84 Aligned_cols=34 Identities=29% Similarity=0.476 Sum_probs=31.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|+|||||-+|...+..|.+.|.+|+|++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 3457999999999999999999999999999986
No 317
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.67 E-value=0.2 Score=52.55 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=31.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|.|||+|..|+..|..|++.|++|+++|++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3568999999999999999999999999999986
No 318
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.57 E-value=0.21 Score=48.74 Aligned_cols=32 Identities=31% Similarity=0.500 Sum_probs=29.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||+|..|...|..++ .|++|+++|+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECC
Confidence 457999999999999999999 99999999987
No 319
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.54 E-value=0.27 Score=48.49 Aligned_cols=34 Identities=35% Similarity=0.404 Sum_probs=31.1
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
....|.|||+|..|.++|+.++..|+ .|+|+|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34579999999999999999999999 99999987
No 320
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.49 E-value=0.25 Score=49.27 Aligned_cols=32 Identities=25% Similarity=0.398 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|.+.|..|++.|.+|.++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999875
No 321
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=90.48 E-value=0.25 Score=45.55 Aligned_cols=34 Identities=21% Similarity=0.376 Sum_probs=30.8
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
...|.|||+|..|.+.|..|++.|.+|.++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4579999999999999999999999999999874
No 322
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.44 E-value=0.23 Score=50.55 Aligned_cols=34 Identities=24% Similarity=0.334 Sum_probs=31.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999874
No 323
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=90.40 E-value=0.24 Score=51.55 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
...|+|||.|.+|+++|..|.++|++|.+.|+.+
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3579999999999999999999999999999864
No 324
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.27 E-value=0.25 Score=47.77 Aligned_cols=32 Identities=28% Similarity=0.177 Sum_probs=29.9
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|.|||+|..|...|..|++.|++|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 48999999999999999999999999999873
No 325
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.08 E-value=0.21 Score=47.50 Aligned_cols=34 Identities=24% Similarity=0.529 Sum_probs=31.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCC
Q 008503 72 LDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~ 105 (563)
..|+|||+|-.|..+|..|++.|. +++|+|+..+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 579999999999999999999997 8999999854
No 326
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.08 E-value=0.22 Score=52.07 Aligned_cols=31 Identities=35% Similarity=0.533 Sum_probs=29.8
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|..+|..+++.|++|+++|++
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6999999999999999999999999999986
No 327
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.07 E-value=0.22 Score=52.07 Aligned_cols=34 Identities=9% Similarity=0.119 Sum_probs=31.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 3479999999999999999999999999999874
No 328
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.05 E-value=0.17 Score=49.77 Aligned_cols=34 Identities=35% Similarity=0.497 Sum_probs=30.1
Q ss_pred CCCccEEEECCchHHHHHHHHHHHC-----C-CcEEEEec
Q 008503 69 SNPLDILVIGGGATGCGVALDAATR-----G-LRVGLVER 102 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~~~A~~la~~-----G-~~V~llEk 102 (563)
.....|.|||+|..|...|..|++. | ++|+++++
T Consensus 6 ~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3445799999999999999999999 9 99999987
No 329
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.97 E-value=0.28 Score=51.45 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|.|||+|..|..+|..+++.|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 369999999999999999999999999999873
No 330
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.74 E-value=0.23 Score=51.49 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=31.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccCC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVEREDF 105 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~ 105 (563)
..|+|||.|.+|+++|..|+++|++|++.|....
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 3699999999999999999999999999998753
No 331
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=89.68 E-value=0.32 Score=48.10 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=30.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
....|+|||+|-+|.+.|+.|+..|+ .|+|+|.+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999998 89999986
No 332
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.63 E-value=0.28 Score=47.96 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|...|..|++.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 36999999999999999999999999999886
No 333
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.63 E-value=0.22 Score=48.61 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|||+|..|.+.|..|++.|.+|.+++|.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 36999999999999999999999999999987
No 334
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.62 E-value=0.23 Score=51.59 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=31.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCc-EEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLR-VGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~-V~llEk~~ 104 (563)
.-+|+|||+|.+|+-+|..|++.|.+ |+|+++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 34799999999999999999999999 99999874
No 335
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.60 E-value=0.3 Score=48.52 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
..|.|||+|..|.++|..|+..|+ +|+|+|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 479999999999999999999999 99999987
No 336
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.59 E-value=0.33 Score=49.89 Aligned_cols=34 Identities=12% Similarity=0.252 Sum_probs=31.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
...|+|||.|-.|..+|..|.+.|.+|++||++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3469999999999999999999999999999873
No 337
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.34 E-value=0.28 Score=49.46 Aligned_cols=35 Identities=26% Similarity=0.517 Sum_probs=31.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~ 104 (563)
.+..|||+|||.+|+.+|..|...|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35689999999999999999999999 999999973
No 338
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.26 E-value=0.32 Score=47.73 Aligned_cols=31 Identities=32% Similarity=0.522 Sum_probs=29.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
.|+|||+|..|.+.|..|+..|+ .|+|+|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 48999999999999999999999 99999986
No 339
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=89.14 E-value=0.26 Score=48.27 Aligned_cols=34 Identities=35% Similarity=0.460 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 3579999999999999999999999999999875
No 340
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.13 E-value=0.31 Score=48.09 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~ 104 (563)
..|.|||+|..|.++|..|++.|+ +|+|+|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 469999999999999999999998 999999873
No 341
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.11 E-value=0.26 Score=49.74 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
...|+|||+|.+|..+|..|...|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999873
No 342
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.07 E-value=0.31 Score=50.67 Aligned_cols=32 Identities=34% Similarity=0.375 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|+..|..|++.|++|+++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 343
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=88.95 E-value=0.21 Score=51.71 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=25.8
Q ss_pred CCCccEEEECCchHHH-HHHHHHHHC-CCcE-EEEecc
Q 008503 69 SNPLDILVIGGGATGC-GVALDAATR-GLRV-GLVERE 103 (563)
Q Consensus 69 ~~~~DVvIIGaGiaG~-~~A~~la~~-G~~V-~llEk~ 103 (563)
+....|.|||.|..|. ..+..+.+. +.++ .|+|+.
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~ 118 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGN 118 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCC
Confidence 3457899999999996 777777664 5664 567765
No 344
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.89 E-value=0.36 Score=50.06 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=32.4
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
....+.|||.|..|+..|..|++.|++|+++|++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35689999999999999999999999999999974
No 345
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.81 E-value=0.16 Score=43.71 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=30.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|+|||+|..|..+|..|.+.|.+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 457999999999999999999999999999886
No 346
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=88.79 E-value=0.27 Score=51.77 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=31.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 4579999999999999999999999999999875
No 347
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=88.74 E-value=0.45 Score=44.00 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|...|..|++.|++|.+++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47999999999999999999999999999886
No 348
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=88.68 E-value=0.34 Score=50.75 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=31.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 3579999999999999999999999999999975
No 349
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.68 E-value=0.19 Score=52.49 Aligned_cols=33 Identities=18% Similarity=0.489 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
+.|+|+|+|-.|..+|..|.+.|++|+|||++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 469999999999999999999999999999973
No 350
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.55 E-value=0.37 Score=50.40 Aligned_cols=34 Identities=26% Similarity=0.178 Sum_probs=31.6
Q ss_pred CccEEEECCchHHHHHHHHHHHC-CC-cEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATR-GL-RVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~-G~-~V~llEk~~ 104 (563)
...|.|||+|..|+.+|..|++. |+ +|+++|++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 45799999999999999999999 99 999999984
No 351
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=88.51 E-value=0.45 Score=46.72 Aligned_cols=35 Identities=17% Similarity=0.359 Sum_probs=31.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
....|.|||.|..|...|..|++.|++|+++++..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34579999999999999999999999999999873
No 352
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.48 E-value=0.39 Score=48.04 Aligned_cols=32 Identities=25% Similarity=0.205 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|...|..|++.|++|.++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 47999999999999999999999999999886
No 353
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.46 E-value=0.4 Score=48.32 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
-.|+|+|+|.+|..++..|...|.+|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 354
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.44 E-value=0.38 Score=47.21 Aligned_cols=31 Identities=35% Similarity=0.393 Sum_probs=29.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|||+|..|.+.|..|+ .|.+|.+++|.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 46999999999999999999 99999999886
No 355
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.33 E-value=0.37 Score=48.55 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=31.6
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
.+..|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 46789999999999999999999998 79999997
No 356
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.26 E-value=0.39 Score=47.59 Aligned_cols=34 Identities=18% Similarity=0.402 Sum_probs=30.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
....|.|||+|.+|.++|+.|+..|+ .|+|+|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 34579999999999999999999998 89999985
No 357
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=88.16 E-value=0.3 Score=52.31 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=31.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~ 224 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSA 224 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCC
Confidence 479999999999999999999999999999985
No 358
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.14 E-value=0.43 Score=48.25 Aligned_cols=32 Identities=25% Similarity=0.495 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|+|+|.+|..+|..|...|.+|+++|++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999999999999999999999999986
No 359
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.13 E-value=0.4 Score=49.01 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999873
No 360
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.13 E-value=0.49 Score=44.74 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=31.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|.|||+|..|.+.|..|++.|++|++.+++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999999999999999999999999999987
No 361
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.12 E-value=0.53 Score=46.18 Aligned_cols=33 Identities=36% Similarity=0.452 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999886
No 362
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.02 E-value=0.45 Score=47.07 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
..|.|||+|.+|..+|..|+..|+ +|+|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 479999999999999999999998 99999986
No 363
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.91 E-value=0.46 Score=45.74 Aligned_cols=33 Identities=33% Similarity=0.471 Sum_probs=30.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...++|+|+|-+|.++|..|++.|.+|++++|.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 356999999999999999999999999999876
No 364
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.90 E-value=0.54 Score=46.89 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||.|..|.+.|..|.+.|++|.++|++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 346999999999999999999999999999987
No 365
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.87 E-value=0.42 Score=49.26 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=30.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|.|||.|..|+..|..|++ |++|+++|++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 34589999999999999999998 9999999987
No 366
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.86 E-value=0.52 Score=43.93 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=30.4
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|+|.|| |-.|..++..|+++|++|+++.|.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 346999998 999999999999999999999986
No 367
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=87.86 E-value=0.46 Score=47.23 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
+..|.|||+|..|.+.|..|++.|++|.++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 468999999999999999999999999999886
No 368
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=87.83 E-value=0.44 Score=47.03 Aligned_cols=32 Identities=28% Similarity=0.446 Sum_probs=28.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||+|..|.+.|..|++.|.+|.++ +.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 357999999999999999999999999999 54
No 369
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=87.71 E-value=0.41 Score=49.40 Aligned_cols=34 Identities=26% Similarity=0.192 Sum_probs=31.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|.|||.|-+|+.+|..+++.|++|+.+|-+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 3468999999999999999999999999999986
No 370
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=87.68 E-value=0.49 Score=45.82 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=30.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 58999999999999999999999999999873
No 371
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.66 E-value=0.39 Score=49.75 Aligned_cols=31 Identities=29% Similarity=0.217 Sum_probs=29.4
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|+..|..|++.|++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999986
No 372
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=87.52 E-value=0.98 Score=47.30 Aligned_cols=39 Identities=36% Similarity=0.609 Sum_probs=35.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
.++||+|||||++|+++|+.|++.|++|+|+|+++..+|
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 458999999999999999999999999999999975444
No 373
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.31 E-value=0.65 Score=45.58 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|...|..|++.|++|.++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999886
No 374
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.17 E-value=0.2 Score=46.97 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=30.7
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|.|||.|..|.+.|..|.+.|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 3457999999999999999999999999999873
No 375
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.17 E-value=0.52 Score=47.88 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
...|+|||+|.+|+.++..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999873
No 376
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.04 E-value=0.54 Score=47.63 Aligned_cols=32 Identities=31% Similarity=0.473 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|||+|.+|..+|..|...|.+|+++|+.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999986
No 377
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=86.92 E-value=0.57 Score=46.08 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHHC--CCcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATR--GLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~~ 104 (563)
.|+|||+|..|.+.|..|++. |.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999985 78999999873
No 378
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.90 E-value=0.58 Score=42.86 Aligned_cols=31 Identities=32% Similarity=0.487 Sum_probs=29.1
Q ss_pred cEEEEC-CchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIG-GGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIG-aGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|+||| +|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 489999 9999999999999999999999886
No 379
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.89 E-value=0.55 Score=46.35 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 457999999999999999999999999999887
No 380
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=86.79 E-value=1.7 Score=47.08 Aligned_cols=39 Identities=28% Similarity=0.471 Sum_probs=35.3
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccCCCCC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVEREDFSSG 108 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~~~~g 108 (563)
.+|||+|||+|+.|+..|..|++.|.+|++|||++.-+|
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 369999999999999999999999999999999975433
No 381
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=86.72 E-value=0.44 Score=47.16 Aligned_cols=30 Identities=20% Similarity=0.386 Sum_probs=28.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEec
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVER 102 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk 102 (563)
.|.|||+|..|...|..|++.|++|.++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 382
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=86.66 E-value=0.47 Score=46.28 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=31.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|.|||.|..|...|..|++.|++|+++|++.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999874
No 383
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=86.63 E-value=0.56 Score=48.85 Aligned_cols=32 Identities=31% Similarity=0.328 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
--|+|+|+|.+|.++|..|+..|.+|+++|++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999999999999999999876
No 384
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.61 E-value=0.61 Score=45.81 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=29.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
..|.|||+|.+|..+|..++..|+ +|+|+|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 369999999999999999999997 99999986
No 385
>2hu9_A MERP, mercuric transport protein periplasmic component; copper chaperone, iron-sufur protein, COPZ, ATX1, ATOX1, metal transport; 1.78A {Archaeoglobus fulgidus}
Probab=86.40 E-value=0.43 Score=40.11 Aligned_cols=46 Identities=4% Similarity=-0.204 Sum_probs=36.4
Q ss_pred ccCCCccHHHHHHHHHhcCCCChhHHHHhhcccccCChHH-----HhhhHHHHHH
Q 008503 473 AHGYPFLEAEVAYCARNEYCESAVDFVARRCRLAFLDTDA-----AGRALPRIIE 522 (563)
Q Consensus 473 ~~c~~v~~~ei~~ai~~e~~~~~~D~l~rRtr~g~g~~~~-----g~~~~~~v~~ 522 (563)
..|..||+.+|+.||++ .+.+ .|++.|++|-+-.|. |+-|.+.|.+
T Consensus 75 C~C~gVT~~~I~eAv~~-Ga~t---~I~~~tgag~~CgC~~~NP~G~CC~~~i~~ 125 (130)
T 2hu9_A 75 CYCNRVTEKMLLEAAEK-FGKE---KAVEITGAGKGKWCVVTNPSGRCCHWHLER 125 (130)
T ss_dssp ETTTTEEHHHHHHHHHH-HCHH---HHHHHHCTTCCSCHHHHSTTSSCTHHHHHH
T ss_pred EEccCCcHHHHHHHHHc-CCHH---HHHHHhccCCCCCCCccCCCCCccchhHHh
Confidence 34999999999999985 4444 579999999954577 8888887654
No 386
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.34 E-value=0.51 Score=52.21 Aligned_cols=32 Identities=31% Similarity=0.492 Sum_probs=30.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|.|||+|..|..+|..+++.|++|+++|++.
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999999999999873
No 387
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.30 E-value=0.49 Score=46.72 Aligned_cols=31 Identities=23% Similarity=0.465 Sum_probs=29.1
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
.|.|||+|..|.+.|..|++.|+ +|+++|++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 48999999999999999999999 99999986
No 388
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=86.27 E-value=0.52 Score=52.09 Aligned_cols=33 Identities=33% Similarity=0.473 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-.|.|||+|..|..+|..++..|++|+|+|..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 369999999999999999999999999999873
No 389
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.19 E-value=0.76 Score=45.24 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
..|.|||.|..|.+.|..|.+.|+ +|.++|+.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 579999999999999999999999 99999887
No 390
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=86.18 E-value=0.5 Score=46.50 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=30.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...|.|||.|..|...|..|++.|+ +|.++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4579999999999999999999999 99999986
No 391
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=86.12 E-value=0.63 Score=48.76 Aligned_cols=34 Identities=26% Similarity=0.238 Sum_probs=31.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.++|||+|.+|+-+|..+++.|.+|+++++..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 3579999999999999999999999999999853
No 392
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.03 E-value=0.71 Score=45.70 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHH-HHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCG-VALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~-~A~~la~~G~~V~llEk~~ 104 (563)
..|.|||.|.+|++ +|..|.++|++|.+.|+.+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46999999999996 8999999999999999874
No 393
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.01 E-value=1 Score=44.72 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=31.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~ 106 (563)
...|+|||+|-.|+.+|..|+..|. +++|+|...+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 4679999999999999999999997 68889988653
No 394
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=86.00 E-value=0.76 Score=45.45 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=30.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~ 104 (563)
...|.|||+|..|.++|+.|+..|+ +|+|+|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3579999999999999999999999 999999863
No 395
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=85.89 E-value=0.59 Score=45.57 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 36999999999999999999999999999886
No 396
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=85.88 E-value=0.59 Score=45.43 Aligned_cols=32 Identities=19% Similarity=0.310 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|...|..|++.|++|.++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999999999886
No 397
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.77 E-value=0.8 Score=41.82 Aligned_cols=31 Identities=32% Similarity=0.523 Sum_probs=29.0
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|+|+|| |..|..++..|+++|++|+++.|.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 4899996 999999999999999999999986
No 398
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.67 E-value=0.71 Score=44.37 Aligned_cols=31 Identities=35% Similarity=0.368 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|.+.|..|.+.|++|.+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4899999999999999999999999999876
No 399
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.63 E-value=0.72 Score=43.82 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=31.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~ 105 (563)
...|+|||+|-.|..+|..|++.|. +++|+|.+.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4689999999999999999999997 6889988754
No 400
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.57 E-value=0.79 Score=42.07 Aligned_cols=31 Identities=35% Similarity=0.573 Sum_probs=29.1
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|+|+|| |..|..++..|.++|++|+++.|.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 3899998 999999999999999999999886
No 401
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=85.45 E-value=0.92 Score=45.47 Aligned_cols=32 Identities=28% Similarity=0.493 Sum_probs=30.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|+|||||..|..+|+.+.+.|++|+++|.++
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 48999999999999999999999999999874
No 402
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=85.41 E-value=0.54 Score=45.52 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=30.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|.|||.|..|...|..|++.|++|++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 59999999999999999999999999999873
No 403
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.34 E-value=0.88 Score=43.97 Aligned_cols=32 Identities=13% Similarity=0.307 Sum_probs=30.0
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+ |..|...|..|++.|++|+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46999999 999999999999999999999876
No 404
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=85.33 E-value=0.7 Score=45.11 Aligned_cols=33 Identities=27% Similarity=0.479 Sum_probs=30.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...|+|||+|.+|.++|..|++.|. +|+|+.|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3569999999999999999999998 89999886
No 405
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.32 E-value=0.75 Score=46.18 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=31.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 357999999999999999999999999999987
No 406
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.30 E-value=0.72 Score=44.99 Aligned_cols=32 Identities=28% Similarity=0.478 Sum_probs=29.9
Q ss_pred cEEEEC-CchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIG-GGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIG-aGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|.||| .|..|.+.|..|++.|++|.+++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 699999 99999999999999999999998763
No 407
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=85.20 E-value=0.8 Score=43.93 Aligned_cols=33 Identities=24% Similarity=0.518 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...++|||+|-+|.++|+.|++.|.+|.|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999887
No 408
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=85.12 E-value=0.6 Score=51.55 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=30.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|.|||+|..|..+|..+++.|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999873
No 409
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=85.06 E-value=0.44 Score=48.00 Aligned_cols=31 Identities=23% Similarity=0.319 Sum_probs=29.6
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|.+.|..|++.|++|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 7999999999999999999999999999886
No 410
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=85.02 E-value=0.98 Score=43.36 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=30.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|+|+|+|..|..++..|.++|++|+++.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 369999999999999999999999999999873
No 411
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=84.94 E-value=0.57 Score=47.93 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=28.4
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|+..|..|++ |++|+++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 48999999999999999999 9999999986
No 412
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=84.89 E-value=0.9 Score=47.80 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
....|.|||.|..|...|..|++.|++|.++++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999863
No 413
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.89 E-value=0.96 Score=44.64 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~ 104 (563)
...|.|||+|.+|.++|+.|+..|+ +|.|+|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3579999999999999999999998 999999873
No 414
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=84.81 E-value=0.74 Score=48.24 Aligned_cols=34 Identities=32% Similarity=0.539 Sum_probs=31.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-.|+|||+|.+|+-.|..+++.|.+|.++++.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 4579999999999999999999999999999975
No 415
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=84.78 E-value=0.79 Score=48.05 Aligned_cols=34 Identities=29% Similarity=0.474 Sum_probs=31.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...+|.|||.|..|...|..|++.|++|.++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3568999999999999999999999999999986
No 416
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.75 E-value=0.75 Score=45.33 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=30.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCC-CcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRG-LRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G-~~V~llEk~~ 104 (563)
..|.|||.|..|...|..|++.| ++|+++++..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999873
No 417
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=84.72 E-value=0.74 Score=47.92 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=30.7
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|+|||+|.+|...+..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 456999999999999999999999999999975
No 418
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.72 E-value=0.65 Score=45.60 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=28.9
Q ss_pred cEEEECCchHHHHHHHHHHHCC--CcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRG--LRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G--~~V~llEk~ 103 (563)
.|.|||+|..|.+.|..|++.| .+|+++|++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 5999999999999999999999 689999986
No 419
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.69 E-value=0.64 Score=44.73 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=30.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...++|+|+|-+|.++|+.|++.|.+|+++.|.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 356999999999999999999999999999886
No 420
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=84.67 E-value=0.76 Score=47.81 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=32.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..-.++|||+|.+|+-+|..+++.|.+|.++++.+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 34689999999999999999999999999999975
No 421
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=84.64 E-value=0.73 Score=44.76 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=31.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~ 105 (563)
...|+|||+|-.|+.+|..|++.|. +++|+|.+.+
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999996 7999998754
No 422
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=84.63 E-value=0.7 Score=45.23 Aligned_cols=33 Identities=30% Similarity=0.616 Sum_probs=30.0
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~~ 104 (563)
..|.|||+|..|..+|+.++..|+ .|+|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999999 999999873
No 423
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=84.49 E-value=0.57 Score=43.45 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEE-Eecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGL-VERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~l-lEk~ 103 (563)
..|.|||+|..|.+.|..|++.|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 4799999999999999999999999998 7765
No 424
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=84.25 E-value=0.88 Score=43.75 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=28.9
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
.|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 58999999999999999999998 89999876
No 425
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=84.16 E-value=0.96 Score=44.00 Aligned_cols=34 Identities=26% Similarity=0.376 Sum_probs=31.1
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
...|+|.|| |..|..++..|.++|++|+++.+..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCC
Confidence 356999998 9999999999999999999999874
No 426
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.15 E-value=1 Score=47.11 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=31.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..+|.|||.|..|...|..|++.|++|++.++..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 427
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=84.14 E-value=0.96 Score=47.44 Aligned_cols=32 Identities=28% Similarity=0.398 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.+|.|||.|..|...|..|++.|++|.++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 47999999999999999999999999999986
No 428
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=84.10 E-value=0.75 Score=43.71 Aligned_cols=31 Identities=26% Similarity=0.524 Sum_probs=28.9
Q ss_pred cEEEECCchHHHHHHHHHHHCC-CcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRG-LRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G-~~V~llEk~ 103 (563)
.|.|||+|..|...|..|++.| .+|.++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 4899999999999999999999 999999886
No 429
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.07 E-value=0.77 Score=44.01 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=30.1
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|+|+|..|..++..|.++|++|+++.|.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 46999999999999999999999999999886
No 430
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=84.05 E-value=0.74 Score=45.27 Aligned_cols=34 Identities=24% Similarity=0.141 Sum_probs=30.7
Q ss_pred CCccEEEECCc-hHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaG-iaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|+|||+| ++|..+|..|...|.+|+++++.
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 34679999999 67999999999999999999886
No 431
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=84.02 E-value=0.97 Score=44.09 Aligned_cols=33 Identities=30% Similarity=0.343 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||+|.+|..+|..|...|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 456999999999999999999999999999986
No 432
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=83.99 E-value=0.74 Score=44.83 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=29.0
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
.|.|||+|..|.++|+.|+..|+ +|.|+|..
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 58999999999999999999998 89999986
No 433
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=83.94 E-value=0.92 Score=43.95 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=29.2
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5899999999999999999999999999886
No 434
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=83.94 E-value=0.92 Score=47.52 Aligned_cols=31 Identities=35% Similarity=0.677 Sum_probs=29.7
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
+|.|||+|..|...|..|++.|++|.++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6999999999999999999999999999986
No 435
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.87 E-value=1 Score=43.85 Aligned_cols=33 Identities=33% Similarity=0.421 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|.|||.|.+|..+|..|...|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 457999999999999999999999999999986
No 436
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=83.78 E-value=1.1 Score=40.36 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.2
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|+|+|| |..|..++..|.++|++|+++.|..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 35999998 9999999999999999999999873
No 437
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=83.77 E-value=0.81 Score=47.12 Aligned_cols=32 Identities=25% Similarity=0.261 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
-.+.|||.|..|+..|..|++.|++|+++|++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECC
Confidence 36889999999999999999999999999997
No 438
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=83.69 E-value=1.1 Score=42.63 Aligned_cols=31 Identities=23% Similarity=0.435 Sum_probs=29.5
Q ss_pred cEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
.++|||+|-+|.++++.|.+.|. +|.+++|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 79999999999999999999998 89999886
No 439
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=83.65 E-value=1 Score=44.23 Aligned_cols=33 Identities=18% Similarity=0.484 Sum_probs=30.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...++|+|+|-+|.++|+.|++.|. +|.|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4569999999999999999999999 89999886
No 440
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=83.59 E-value=0.44 Score=44.56 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-.|+|||+|-.|..+|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 469999999999999999999999 99999873
No 441
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=83.53 E-value=1.1 Score=44.33 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=30.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
....|.|||+|.+|.++|+.|+..|+ .++|+|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34579999999999999999999998 89999975
No 442
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=83.52 E-value=0.91 Score=44.10 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|...|..|++.|++|.+++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 47999999999999999999999999999876
No 443
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=83.47 E-value=0.71 Score=44.75 Aligned_cols=32 Identities=22% Similarity=0.422 Sum_probs=29.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...++|+|+|-+|.++|..|++.| +|++++|.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 346999999999999999999999 99999876
No 444
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.45 E-value=0.8 Score=45.31 Aligned_cols=32 Identities=31% Similarity=0.400 Sum_probs=29.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
..|.|||+|.+|.++|+.++..|+ .|+|+|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 579999999999999999999998 89999985
No 445
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=83.33 E-value=1 Score=45.30 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=29.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|+|+|.|.+|..+|..|.+.|.+|++.|+.
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 456999999999999999999999999988753
No 446
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=83.14 E-value=1.1 Score=43.41 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=30.2
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
....++|+|+|-+|.++++.|++.|. +|.|+.|.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 34579999999999999999999999 69999876
No 447
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=82.97 E-value=1.4 Score=42.53 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC---cEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGL---RVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~---~V~llEk~~ 104 (563)
..|.|||+|..|.+.|..|.+.|+ +|.+++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 469999999999999999999999 999999873
No 448
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=82.95 E-value=0.88 Score=43.90 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=30.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...++|||+|-+|.++|+.|++.|. +|.|+.|.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3579999999999999999999998 89999887
No 449
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=82.90 E-value=1 Score=42.69 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=30.2
Q ss_pred ccEEEECCchHHHHHHHHHHHCC----CcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRG----LRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G----~~V~llEk~~ 104 (563)
..|.|||+|..|.+.|..|++.| .+|.++++..
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 46999999999999999999999 7999999874
No 450
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=82.88 E-value=0.99 Score=44.48 Aligned_cols=34 Identities=18% Similarity=0.456 Sum_probs=29.9
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
....|+|||+|-+|.+.|+.|+..|+ .+.|+|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999885 79999875
No 451
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=82.87 E-value=0.89 Score=43.76 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=29.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|+|||+|.+|.++|..|.+.|.+|.++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 46999999999999999999999999999876
No 452
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=82.79 E-value=0.85 Score=43.47 Aligned_cols=32 Identities=28% Similarity=0.461 Sum_probs=29.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCc-EEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLR-VGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~-V~llEk~ 103 (563)
..|.|||+|..|...|..|++.|++ |.++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 4699999999999999999999999 8899876
No 453
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=82.79 E-value=0.9 Score=43.75 Aligned_cols=30 Identities=27% Similarity=0.257 Sum_probs=28.2
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|.|||+|..|...|..|++ |++|.+++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCC
Confidence 59999999999999999999 9999999886
No 454
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=82.68 E-value=1.4 Score=41.09 Aligned_cols=32 Identities=31% Similarity=0.398 Sum_probs=28.8
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.-|+|.|| |-.|..+|..|+++|++|++++++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45899997 899999999999999999999875
No 455
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=82.68 E-value=0.94 Score=44.56 Aligned_cols=32 Identities=34% Similarity=0.496 Sum_probs=29.3
Q ss_pred cEEEECCchHHHHHHHHHHHCCC--cEEEEeccC
Q 008503 73 DILVIGGGATGCGVALDAATRGL--RVGLVERED 104 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~~ 104 (563)
.|.|||+|.+|.++|+.++..|+ .|+|+|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 48999999999999999999988 899999873
No 456
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=82.44 E-value=0.67 Score=47.33 Aligned_cols=29 Identities=28% Similarity=0.416 Sum_probs=27.4
Q ss_pred cEEEECCchHHHHHHHHHHH-CCCcEEEEe
Q 008503 73 DILVIGGGATGCGVALDAAT-RGLRVGLVE 101 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~-~G~~V~llE 101 (563)
.|.|||+|..|.+.|..|++ .|++|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 69999999999999999998 499999998
No 457
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=82.41 E-value=1.1 Score=44.13 Aligned_cols=33 Identities=21% Similarity=0.492 Sum_probs=29.4
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
...|+|||+|.+|.+.|+.|+..|+ .|+++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3579999999999999999998886 79999886
No 458
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.27 E-value=0.91 Score=43.15 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=28.9
Q ss_pred ccEEEECC-c-hHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGG-G-ATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGa-G-iaG~~~A~~la~~G~~V~llEk~ 103 (563)
.-++|.|| | -.|..+|..|+++|++|++++++
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 35899999 7 59999999999999999999886
No 459
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.23 E-value=1.3 Score=46.24 Aligned_cols=32 Identities=28% Similarity=0.476 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.+|.|||.|..|...|..|++.|++|.++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 57999999999999999999999999999986
No 460
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=82.10 E-value=1.3 Score=42.84 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=29.7
Q ss_pred ccEEEEC-CchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIG-GGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIG-aGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..++|+| +|-+|.++|..|++.|.+|++++|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4699999 8999999999999999999999886
No 461
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=82.06 E-value=1.1 Score=46.79 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=30.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.-.|+|||.|.+|..+|..|...|.+|+++|+.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 356999999999999999999999999999986
No 462
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=82.05 E-value=1.2 Score=44.13 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=31.3
Q ss_pred CCccEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 70 NPLDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
....|+|.|| |..|..++..|.++|++|+++.+..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 59 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFS 59 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3457999996 9999999999999999999999874
No 463
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=82.04 E-value=0.78 Score=46.32 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.3
Q ss_pred ccEEEECCchHHHHHHHHHHHCC-------CcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRG-------LRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G-------~~V~llEk~~ 104 (563)
..|.|||+|..|.+.|..|++.| .+|.++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~ 61 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDE 61 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECCh
Confidence 36999999999999999999999 9999999863
No 464
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=81.92 E-value=0.69 Score=46.19 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=30.4
Q ss_pred ccEEEECCchHHHHHHHHHHHCC-------CcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRG-------LRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G-------~~V~llEk~~ 104 (563)
..|.|||+|..|.+.|..|++.| .+|.++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 46999999999999999999999 8999999873
No 465
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=81.91 E-value=1.1 Score=44.15 Aligned_cols=34 Identities=24% Similarity=0.553 Sum_probs=30.5
Q ss_pred CCccEEEECCchHHHHHHHHHHHCCC--cEEEEecc
Q 008503 70 NPLDILVIGGGATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaGiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
....|+|||+|.+|.++|+.|+..|+ .+.|+|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34579999999999999999999988 89999985
No 466
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=81.90 E-value=1.3 Score=43.75 Aligned_cols=33 Identities=15% Similarity=0.266 Sum_probs=30.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCC----CcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRG----LRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G----~~V~llEk~ 103 (563)
...|.|||+|..|.+.|..|++.| .+|.++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 347999999999999999999999 799999886
No 467
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=81.80 E-value=1.3 Score=44.05 Aligned_cols=32 Identities=25% Similarity=0.353 Sum_probs=29.7
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||.|..|.+.|..|.+.|++|++.++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 36999999999999999999999999999886
No 468
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=81.63 E-value=1.4 Score=41.53 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=29.8
Q ss_pred ccEEEECCchHHHHHHHHHHHCCC----cEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGL----RVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~----~V~llEk~ 103 (563)
..|.|||+|..|.+.|..|.+.|+ +|.+++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 369999999999999999999998 99999986
No 469
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=81.62 E-value=0.85 Score=47.83 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=29.7
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~ 103 (563)
..|.|||.|..|+..|..|++. |++|+++|++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999999999999999998 7999999986
No 470
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=81.61 E-value=1.3 Score=42.10 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=29.4
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.|+|||+|.+|.++|..|.+.|.+|.++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 7999999999999999999999999999876
No 471
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=81.61 E-value=1.7 Score=46.52 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~ 106 (563)
...|+|||+|-.|+.+|..|++.|. +++|+|.+.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4579999999999999999999997 68899988654
No 472
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=81.61 E-value=1.5 Score=41.03 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=29.1
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-|+|.|| |-.|..+|..|+++|++|+++++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 3899997 9999999999999999999999873
No 473
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=81.59 E-value=1.3 Score=42.87 Aligned_cols=33 Identities=18% Similarity=0.126 Sum_probs=30.1
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...++|||+|-+|.++++.|.+.|. +|.|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4579999999999999999999998 89999876
No 474
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=81.50 E-value=1.4 Score=44.04 Aligned_cols=36 Identities=17% Similarity=0.374 Sum_probs=32.2
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~ 106 (563)
...|+|||+|-.|+.+|..|++.|. +++|+|...+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~ 72 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVT 72 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcc
Confidence 4689999999999999999999998 79999987543
No 475
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=81.48 E-value=1.6 Score=41.38 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=28.0
Q ss_pred ccEEEECC-ch--HHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGG-GA--TGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGa-Gi--aG~~~A~~la~~G~~V~llEk~ 103 (563)
.-++|.|| |. .|..+|..|+++|++|+++++.
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 45899997 45 8999999999999999999875
No 476
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=81.45 E-value=1.4 Score=42.36 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=29.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...++|+|+|-+|.++|+.|++.|. +|.++.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3569999999999999999999996 89999876
No 477
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=81.44 E-value=1.5 Score=43.72 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=29.4
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCC--cEEEEecc
Q 008503 71 PLDILVIGG-GATGCGVALDAATRGL--RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGa-GiaG~~~A~~la~~G~--~V~llEk~ 103 (563)
...|+|||+ |-+|.++|+.++..|+ .|+|+|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 357999997 9999999999999995 79999975
No 478
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=81.43 E-value=1.4 Score=42.65 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=29.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...++|+|+|-+|.++++.|++.|. +|.++.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 4579999999999999999999996 89999886
No 479
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=81.33 E-value=1.5 Score=40.16 Aligned_cols=30 Identities=17% Similarity=0.329 Sum_probs=28.2
Q ss_pred EEEECC-chHHHHHHHHHH-HCCCcEEEEecc
Q 008503 74 ILVIGG-GATGCGVALDAA-TRGLRVGLVERE 103 (563)
Q Consensus 74 VvIIGa-GiaG~~~A~~la-~~G~~V~llEk~ 103 (563)
|+|+|| |-.|..++..|+ +.|++|+++.|+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 999995 999999999999 899999999986
No 480
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=81.25 E-value=1.3 Score=45.18 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=30.6
Q ss_pred CccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
...|+|||.|.+|..+|..|...|.+|++.|++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999999999999999999999999999986
No 481
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=81.18 E-value=1.4 Score=47.22 Aligned_cols=33 Identities=27% Similarity=0.477 Sum_probs=31.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-.++|||+|-.|..+|..|.+.|.+|++||++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~ 381 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQE 381 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCh
Confidence 579999999999999999999999999999985
No 482
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=81.07 E-value=1.8 Score=46.18 Aligned_cols=36 Identities=25% Similarity=0.548 Sum_probs=31.9
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDFS 106 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~~ 106 (563)
...|+|||+|-.|+.+|..|++.|. +++|+|.+.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve 363 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 363 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccc
Confidence 4679999999999999999999998 69999987553
No 483
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=80.96 E-value=1.9 Score=40.14 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=29.0
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~ 103 (563)
.-|+|.|| |-.|..+|..|+++|++|++++++
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 45899997 899999999999999999999875
No 484
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=80.90 E-value=0.93 Score=47.32 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=29.9
Q ss_pred ccEEEECCchHHHHHHHHHHHC--CCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATR--GLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~--G~~V~llEk~ 103 (563)
..|.|||.|..|+..|..|++. |++|+++|++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 4799999999999999999999 8999999986
No 485
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=80.80 E-value=1.3 Score=44.31 Aligned_cols=35 Identities=23% Similarity=0.504 Sum_probs=31.3
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~ 105 (563)
...|+|||+|-.|+.+|..|++.|. +++|+|.+.+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4679999999999999999999997 6999998754
No 486
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=80.59 E-value=1.2 Score=42.30 Aligned_cols=30 Identities=23% Similarity=0.201 Sum_probs=27.5
Q ss_pred cEEEECCchHHHHHHHHHHHCCCcEEEEec
Q 008503 73 DILVIGGGATGCGVALDAATRGLRVGLVER 102 (563)
Q Consensus 73 DVvIIGaGiaG~~~A~~la~~G~~V~llEk 102 (563)
.|.|||+|..|...|..|++.|++|.+.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 489999999999999999999999998755
No 487
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=80.36 E-value=1.3 Score=40.68 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=30.2
Q ss_pred ccEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..|+|+|| |..|..++..|.++|++|.++.|..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 46999995 9999999999999999999999973
No 488
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=80.31 E-value=1.6 Score=42.73 Aligned_cols=33 Identities=21% Similarity=0.517 Sum_probs=30.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
...++|+|+|-+|.++|+.|++.|. +|.|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4579999999999999999999998 79999886
No 489
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=80.06 E-value=1.6 Score=44.04 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=31.8
Q ss_pred CCccEEEECC-chHHHHHHHHHHHCCC---cEEEEeccC
Q 008503 70 NPLDILVIGG-GATGCGVALDAATRGL---RVGLVERED 104 (563)
Q Consensus 70 ~~~DVvIIGa-GiaG~~~A~~la~~G~---~V~llEk~~ 104 (563)
....|+|||| |.+|..++..|...|. +|.++|.+.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 4578999999 9999999999999998 999999873
No 490
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=80.05 E-value=1.2 Score=44.17 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=29.7
Q ss_pred CCccEEEECC-chHHHHHHHHHHHCCC-------cEEEEecc
Q 008503 70 NPLDILVIGG-GATGCGVALDAATRGL-------RVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGa-GiaG~~~A~~la~~G~-------~V~llEk~ 103 (563)
....|+|||| |.+|...++.|+..|+ .|.++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 3467999998 9999999999999886 79999875
No 491
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=79.97 E-value=1.8 Score=42.02 Aligned_cols=34 Identities=12% Similarity=0.033 Sum_probs=30.1
Q ss_pred CCccEEEECCc-hHHHHHHHHHHHCCCcEEEEecc
Q 008503 70 NPLDILVIGGG-ATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 70 ~~~DVvIIGaG-iaG~~~A~~la~~G~~V~llEk~ 103 (563)
....|+|||+| ++|..+|..|...|.+|+++.+.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 34689999999 68999999999999999999744
No 492
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=79.93 E-value=2.1 Score=40.36 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.1
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..-++|.|| |-.|..+|..|++.|++|+++++..
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 41 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP 41 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 345788886 6789999999999999999999874
No 493
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=79.85 E-value=1.7 Score=41.87 Aligned_cols=32 Identities=38% Similarity=0.522 Sum_probs=29.5
Q ss_pred cEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.|+|.|| |.+|...+..|.++|++|.++-|++
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4999998 9999999999999999999998863
No 494
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=79.56 E-value=1.4 Score=43.29 Aligned_cols=30 Identities=30% Similarity=0.522 Sum_probs=27.9
Q ss_pred EEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 74 ILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 74 VvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
|.|||+|.+|.++|+.++..|+ .|.|+|..
T Consensus 2 I~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 2 ITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 8999999999999999999898 59999986
No 495
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=79.39 E-value=1.9 Score=42.61 Aligned_cols=34 Identities=29% Similarity=0.304 Sum_probs=30.3
Q ss_pred CccEEEECC-chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 71 PLDILVIGG-GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 71 ~~DVvIIGa-GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
..-|+|.|| |..|..++..|.++|++|+++++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 53 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRP 53 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 356999998 9999999999999999999999874
No 496
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=79.39 E-value=1.7 Score=41.61 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=28.9
Q ss_pred cEEEECC---chHHHHHHHHHHHCCCcEEEEeccC
Q 008503 73 DILVIGG---GATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 73 DVvIIGa---GiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
-++|.|| |-.|..+|..|+++|++|++++++.
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4899997 6899999999999999999998863
No 497
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=79.20 E-value=1.3 Score=45.19 Aligned_cols=33 Identities=33% Similarity=0.492 Sum_probs=30.0
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEecc
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVERE 103 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~ 103 (563)
.-.|+|||+|.+|..+|..|...|. +|+++++.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4579999999999999999999998 89999876
No 498
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=79.14 E-value=1.8 Score=43.78 Aligned_cols=33 Identities=30% Similarity=0.510 Sum_probs=30.5
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEeccC
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERED 104 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~~ 104 (563)
.-|+|||+|..|..++..|.+.|++|++++...
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 369999999999999999999999999999764
No 499
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=79.13 E-value=1.5 Score=41.58 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=29.6
Q ss_pred ccEEEECCchHHHHHHHHHHHCCCcEEEEecc
Q 008503 72 LDILVIGGGATGCGVALDAATRGLRVGLVERE 103 (563)
Q Consensus 72 ~DVvIIGaGiaG~~~A~~la~~G~~V~llEk~ 103 (563)
..|.|||+|..|...|..|.+.|..|.+++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 36999999999999999999999999999876
No 500
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=79.03 E-value=2.1 Score=44.09 Aligned_cols=35 Identities=26% Similarity=0.625 Sum_probs=31.5
Q ss_pred CccEEEECCchHHHHHHHHHHHCCC-cEEEEeccCC
Q 008503 71 PLDILVIGGGATGCGVALDAATRGL-RVGLVEREDF 105 (563)
Q Consensus 71 ~~DVvIIGaGiaG~~~A~~la~~G~-~V~llEk~~~ 105 (563)
...|+|||+|-.|+.+|..|++.|. +++|+|...+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 4689999999999999999999997 7999998754
Done!