BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008509
         (563 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255546439|ref|XP_002514279.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
 gi|223546735|gb|EEF48233.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
          Length = 724

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/563 (80%), Positives = 507/563 (90%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I SEEG KLGL+D +V+S+ELLKVSR WALDI  RRKPW+RSLH TDKLGSLS
Sbjct: 162 MMLTSKPIMSEEGKKLGLVDVIVSSQELLKVSRQWALDIKERRKPWMRSLHMTDKLGSLS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA E+LK AR QAKKTAPNMPQHQACLDVIE+G+VHGGYSGVLKEAKVFKELV+ DT++ 
Sbjct: 222 EALELLKAARQQAKKTAPNMPQHQACLDVIEDGVVHGGYSGVLKEAKVFKELVISDTAKS 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR TSKVPNV+DIGLKPR ++KVAVIGGGLMGSGI TA I + IYVVLKE+NS
Sbjct: 282 LIHVFFAQRTTSKVPNVSDIGLKPRQIKKVAVIGGGLMGSGIITALITSGIYVVLKEINS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYLLKGIK +EANVRGLVTRGKL+ DKA+ AL MLKGVLDYS+F+DVDMVIEAVIES+PL
Sbjct: 342 EYLLKGIKMVEANVRGLVTRGKLSPDKADKALSMLKGVLDYSDFRDVDMVIEAVIESIPL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFSE+EKACPPHCILATNTSTIDLN+VG+KTS+QD IIGAHFFSPAH+MPLLEIVRT
Sbjct: 402 KQKIFSEIEKACPPHCILATNTSTIDLNLVGKKTSAQDCIIGAHFFSPAHIMPLLEIVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS Q ILDLMTVGK IKKV VVVGNCTGFAVNR FFPY+Q A LLV+LGVDVFRID  
Sbjct: 462 DKTSPQAILDLMTVGKSIKKVSVVVGNCTGFAVNRTFFPYAQGAHLLVNLGVDVFRIDRV 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FGLP+GP QL DLAGYGVA A  KEF  AFPDR+F+SPLVDLL+KSGRNGK NGKG 
Sbjct: 522 ICNFGLPMGPLQLQDLAGYGVAVAVGKEFATAFPDRTFKSPLVDLLIKSGRNGKNNGKGY 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGSKPKPDPSV+PII+E +RL+NIMP GKPIS++++EIVEMI FP+VNE+CRVLEE
Sbjct: 582 YIYEKGSKPKPDPSVIPIIQESQRLTNIMPNGKPISISDQEIVEMIFFPIVNEACRVLEE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+VVRASDLD ASVLGMSFPSYRGGIVFWAD VG  ++YTSLKKWS LYGNF+KPSRFLE
Sbjct: 642 GVVVRASDLDIASVLGMSFPSYRGGIVFWADTVGPKHIYTSLKKWSLLYGNFYKPSRFLE 701

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA KG+PLSAPVSSS  SR+R+
Sbjct: 702 ERALKGMPLSAPVSSSPGSRSRM 724


>gi|224142159|ref|XP_002324426.1| predicted protein [Populus trichocarpa]
 gi|222865860|gb|EEF02991.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  944 bits (2441), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/549 (82%), Positives = 501/549 (91%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +MLLSK I SEEG KLGLIDA+V S+ELLKVSR WALDI+ RRKPW+RSLHRTDK+GSLS
Sbjct: 162 IMLLSKPIMSEEGKKLGLIDAIVPSQELLKVSRQWALDISERRKPWLRSLHRTDKIGSLS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAREVLK AR QAKK APN+PQHQA LDV+EEGI+HGGY+GVLKEAKVFKELV+ +TS+G
Sbjct: 222 EAREVLKAARQQAKKIAPNVPQHQALLDVMEEGIIHGGYNGVLKEAKVFKELVLTETSKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR TSK+P VTD+GLKPR ++KVAVIGGGLMGSGIATA I++NI+VVLKE+NS
Sbjct: 282 LVHVFFAQRMTSKIPKVTDVGLKPRHIKKVAVIGGGLMGSGIATALIVSNIHVVLKEINS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYL KG KTIEANVR LVTRGKLT+DKA+ AL MLKG LDYS+FKDVDMVIEAVIESVPL
Sbjct: 342 EYLQKGTKTIEANVRSLVTRGKLTRDKADKALSMLKGALDYSDFKDVDMVIEAVIESVPL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFSE+EK CPPHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 402 KQKIFSEIEKICPPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHIMPLLEIVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TSAQ ILDLMTVGK IKKVPVVVGNCTGFAVNRAFFPY+QSA +LV LGVDVFRID  
Sbjct: 462 EKTSAQAILDLMTVGKTIKKVPVVVGNCTGFAVNRAFFPYTQSALILVHLGVDVFRIDKL 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFGLP+GP+QL DL+GYGVA A  KEF  AFPDR+FQSPL+ LL+KSGRNGK NGKG 
Sbjct: 522 ISSFGLPMGPYQLQDLSGYGVALAVEKEFANAFPDRTFQSPLIHLLVKSGRNGKTNGKGY 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGSKP+PDPSVLPIIEE RRL+NIMP GKPI++T+KEIVEM+LFPVVNE+CRVL+E
Sbjct: 582 YIYEKGSKPRPDPSVLPIIEESRRLANIMPNGKPINITDKEIVEMVLFPVVNEACRVLDE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+VVRASDLD ASVLGMSFPSYRGGIVFWAD VG  +VY SLKKWSQ +G+F+KPS+FLE
Sbjct: 642 GVVVRASDLDTASVLGMSFPSYRGGIVFWADLVGPKHVYDSLKKWSQRFGDFYKPSKFLE 701

Query: 541 ERATKGIPL 549
           ERAT GIPL
Sbjct: 702 ERATGGIPL 710


>gi|225445200|ref|XP_002284283.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
           protein AIM1 [Vitis vinifera]
 gi|297738804|emb|CBI28049.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  935 bits (2417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/563 (80%), Positives = 508/563 (90%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MM LSKSI+SEEG+KLGL+DA+V+SEELLKVSR WALDI  +RKPW+RSLH+T+KLGS+S
Sbjct: 162 MMRLSKSISSEEGYKLGLVDAIVSSEELLKVSRRWALDIVDKRKPWVRSLHQTEKLGSVS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA ++LK++R QA+KT P++PQHQACLDVIEEGIVHGGYSG+LKE KVF +LV+ DT++G
Sbjct: 222 EALDILKISRQQARKTVPHLPQHQACLDVIEEGIVHGGYSGLLKETKVFNKLVLSDTAKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQRATSKVPNVTDIGLKPR V+KVAVIGGGLMGSGIATA I +NIYVVLKEVNS
Sbjct: 282 LIHVFFAQRATSKVPNVTDIGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVVLKEVNS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYLLKGIKTIEANVRGLVT+GKLTQDKA  AL MLKGVLDYSEFKD+DMVIEAVIE++ L
Sbjct: 342 EYLLKGIKTIEANVRGLVTKGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAVIENISL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFSE+EK C PHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSPAHVMPLLE+VRT
Sbjct: 402 KQKIFSEIEKICSPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPLLEVVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TSAQVILDLMTVGK IKK+PVVVG+CTGFAVNR FFPY+Q A  LV+LGVD FRID  
Sbjct: 462 EKTSAQVILDLMTVGKAIKKIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDPFRIDWV 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FGLP+GPFQL DL+GYGVA A  KEF  AF  R+F+SPLV+LLLK+GRNGK NGKG 
Sbjct: 522 ISNFGLPMGPFQLQDLSGYGVAVAVGKEFATAFQGRTFESPLVNLLLKNGRNGKQNGKGY 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGSKP+PDPSVLPIIEE RRL+NIMPGGKPISV  +EI+EMILFPVVNE+CRVL+E
Sbjct: 582 YIYEKGSKPRPDPSVLPIIEESRRLANIMPGGKPISVANQEILEMILFPVVNEACRVLDE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+VVRASDLD  SVLGMSFPSYRGGIVFWAD VG  Y+YT LKKWS +YG FFKPS +LE
Sbjct: 642 GVVVRASDLDITSVLGMSFPSYRGGIVFWADEVGPYYIYTCLKKWSAMYGTFFKPSSYLE 701

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           +RATKGIPLSAP S+S  S +RL
Sbjct: 702 QRATKGIPLSAPASASPASNSRL 724


>gi|356520511|ref|XP_003528905.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
           protein AIM1-like [Glycine max]
          Length = 724

 Score =  929 bits (2402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/563 (79%), Positives = 502/563 (89%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK ITSEEG K GLIDA+V+SEELLK SRLWAL+I  RRKPWIRSLHRTDK+GSLS
Sbjct: 162 MMLTSKPITSEEGRKFGLIDAIVSSEELLKASRLWALEIGERRKPWIRSLHRTDKIGSLS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VLK AR Q KKTAP++PQ QAC+DVIE GIVHGGYSGVLKEA+VFK+LV+ DTS+G
Sbjct: 222 EARAVLKTARQQVKKTAPHLPQQQACVDVIEHGIVHGGYSGVLKEAEVFKQLVISDTSKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L++VFFAQRA SKVP VTDIGLKPR V+K AVIGGGLMGSGIATA IL NI V+LKE+NS
Sbjct: 282 LINVFFAQRAISKVPGVTDIGLKPRNVKKAAVIGGGLMGSGIATALILGNIRVILKEINS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E+LLKGIKTIEANV GLV RGKLT+ KA+ AL +LKGVLDYSEFKDVD+VIEAVIE++ L
Sbjct: 342 EFLLKGIKTIEANVNGLVRRGKLTKQKADAALSLLKGVLDYSEFKDVDLVIEAVIENISL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF +LEK CPPHCILA+NTSTIDL++VG+ TSSQDRI GAHFFSPAH+MPLLEI+RT
Sbjct: 402 KQTIFGDLEKICPPHCILASNTSTIDLDVVGKTTSSQDRIAGAHFFSPAHIMPLLEIIRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TSAQVI+DL+TVGKIIKK PVVVGNCTGFAVN+ FFPYSQ A LLV+LGVDVFRID  
Sbjct: 462 DKTSAQVIVDLITVGKIIKKAPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDRL 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FG PIGPFQL DLAGYGVA ATSK F  AF DR F+SPL+DLL+KSGRNGK NGKG 
Sbjct: 522 ICNFGFPIGPFQLQDLAGYGVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGY 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG KPKPDPS+LPIIEE RRL NIMP GKPIS+T++EIVEMILFPVVNE+CRVLE+
Sbjct: 582 YIYEKGGKPKPDPSILPIIEESRRLCNIMPNGKPISITDQEIVEMILFPVVNEACRVLED 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+V+RASDLD ASVLGMSFP+YRGGIVFWAD VGAN+++TSLKKW+QLYGNF+KPSR+LE
Sbjct: 642 GVVIRASDLDIASVLGMSFPNYRGGIVFWADLVGANHIFTSLKKWAQLYGNFYKPSRYLE 701

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA KGIPLSAP SS+  S ARL
Sbjct: 702 ERALKGIPLSAPASSTPKSMARL 724


>gi|406365505|gb|AFS41246.1| cinnamoyl-CoA hydratase-dehydrogenase [Petunia x hybrida]
          Length = 724

 Score =  928 bits (2399), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/547 (81%), Positives = 490/547 (89%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MM+ SK I SEEG KLGLIDA+V S ELLKVSR WALDIA RRKPW+RSLH+TDK+GSLS
Sbjct: 162 MMMTSKPIMSEEGKKLGLIDAIVPSSELLKVSRQWALDIAERRKPWMRSLHKTDKIGSLS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAREVLK+AR Q K+TA NMPQH AC+DVIEEGI+HGGY+GVLKEAKVFK+LV+ +TS+G
Sbjct: 222 EAREVLKVARQQVKQTAKNMPQHVACIDVIEEGIIHGGYAGVLKEAKVFKDLVLSETSKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQRATSKVPNVTDIGLKPR V+KVAVIGGGLMGSGIATA  L+N +VVLKE+NS
Sbjct: 282 LVHVFFAQRATSKVPNVTDIGLKPRTVKKVAVIGGGLMGSGIATALALSNTFVVLKEINS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYL KG+K IEANVRGLV R KL QDKA+ AL M+KG LDYS+FKDVDMVIEAVIESVPL
Sbjct: 342 EYLQKGMKAIEANVRGLVARKKLPQDKADKALSMVKGALDYSDFKDVDMVIEAVIESVPL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFSE+EK CPPHCILA+NTSTIDLNI+GE T S+DRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 402 KQKIFSEIEKVCPPHCILASNTSTIDLNIIGENTRSKDRIIGAHFFSPAHIMPLLEIVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDLM VGK IKKVPVVVGNCTGFAVNR FFPYSQ A +LV+LGVD +RID+ 
Sbjct: 462 EKTSTQAILDLMAVGKAIKKVPVVVGNCTGFAVNRTFFPYSQGAHILVNLGVDAYRIDAQ 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFGLP+GP QL DL GYGVA A  KEF  AF DR+F+SPL+DLL+KSGRNGK NGKG 
Sbjct: 522 ITSFGLPMGPLQLQDLTGYGVAVAVGKEFGSAFSDRTFKSPLIDLLIKSGRNGKNNGKGF 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGSKP+PD SVLPIIEE RRL+NIMPGGKPISVT++EIVEMILFPVVNE+CRVL+E
Sbjct: 582 YIYEKGSKPRPDLSVLPIIEESRRLTNIMPGGKPISVTDQEIVEMILFPVVNEACRVLDE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GIVVRASDLD ASVLGMSFPSYRGGIVFWAD VGA ++Y SL KWS+LYGNFFKPSRFLE
Sbjct: 642 GIVVRASDLDVASVLGMSFPSYRGGIVFWADTVGAGHIYKSLTKWSELYGNFFKPSRFLE 701

Query: 541 ERATKGI 547
           ERATKGI
Sbjct: 702 ERATKGI 708


>gi|356531273|ref|XP_003534202.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
           protein AIM1-like [Glycine max]
          Length = 724

 Score =  923 bits (2385), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/563 (78%), Positives = 502/563 (89%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK ITSEEG KLGLIDA+V+SEELL  SRLWAL+I  R KPW+RSLHRTDK+GSLS
Sbjct: 162 MMLTSKPITSEEGRKLGLIDAIVSSEELLNASRLWALEIGERCKPWVRSLHRTDKIGSLS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAREVL+ AR Q KKT P++PQ  AC+DVIE GIVHGGYSGVLKEA+VFK+LV+ DT++G
Sbjct: 222 EAREVLRTARQQVKKTVPHLPQQLACVDVIEHGIVHGGYSGVLKEAEVFKQLVVSDTAKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L++VFF+QRA SKVP VTDIGLKPR V+K AVIGGGLMGSGIATA IL NI+V+LKE+N 
Sbjct: 282 LINVFFSQRAISKVPGVTDIGLKPRNVKKAAVIGGGLMGSGIATALILGNIHVILKEINP 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E+LLKGIKTIEANV GLV RGKLT+ KA+ AL +L+GVLDYSEFKDVD+VIEAVIE++ L
Sbjct: 342 EFLLKGIKTIEANVNGLVRRGKLTKQKADAALSLLRGVLDYSEFKDVDLVIEAVIENISL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS+LEK CPPHCILA+NTSTIDL++VG+ TSSQ+RI GAHFFSPAH+MPLLEI+RT
Sbjct: 402 KQTIFSDLEKICPPHCILASNTSTIDLDVVGKTTSSQNRIAGAHFFSPAHIMPLLEIIRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TSAQVILDL+TVGKIIKK PVVVGNCTGFAVN+ FFPYSQ A LLV+LGVDVFRID+ 
Sbjct: 462 DKTSAQVILDLITVGKIIKKTPVVVGNCTGFAVNKTFFPYSQGAHLLVNLGVDVFRIDTL 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR+FG PIGPFQL DLAGYGVA ATSK F  AF DR F+SPL+DLL+KSGRNGK NGKG 
Sbjct: 522 IRNFGFPIGPFQLQDLAGYGVAVATSKVFADAFSDRIFKSPLLDLLIKSGRNGKNNGKGY 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEK  KPKPDPS+LPIIEE RRL NIMP GKPISVT++EIVEMILFPVVNE+CRVLE+
Sbjct: 582 YIYEKAGKPKPDPSILPIIEESRRLCNIMPNGKPISVTDQEIVEMILFPVVNEACRVLED 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+V+RASDLD ASVLGMSFP+YRGGIVFWAD VGAN++YTSLKKW+QLYGNF+KPSR+LE
Sbjct: 642 GVVIRASDLDIASVLGMSFPNYRGGIVFWADLVGANHIYTSLKKWAQLYGNFYKPSRYLE 701

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA KGIPLSAP SS+  S ARL
Sbjct: 702 ERALKGIPLSAPASSTPKSMARL 724


>gi|357500631|ref|XP_003620604.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
           [Medicago truncatula]
 gi|355495619|gb|AES76822.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
           [Medicago truncatula]
          Length = 722

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/563 (78%), Positives = 498/563 (88%), Gaps = 2/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT+EEG KLGLIDA+V+  ELLK+SR WAL+IA +R+PWIRSLH TDKLGS  
Sbjct: 162 MMLTSKPITAEEGQKLGLIDAIVSPAELLKLSRQWALEIAEQRRPWIRSLHITDKLGS-- 219

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +AREVL+ AR   KKTAP++PQ QAC+DVIE GI+HGGYSGVL+EA+VFK+LV+ +T++G
Sbjct: 220 DAREVLRTARQHVKKTAPHLPQQQACIDVIEHGILHGGYSGVLREAEVFKKLVLSETAKG 279

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR  SK+P VTDIGLKPR VRK AVIGGGLMGSGIATA IL NI V+LKEVNS
Sbjct: 280 LIHVFFAQRTISKIPGVTDIGLKPRNVRKAAVIGGGLMGSGIATALILGNIRVILKEVNS 339

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYL KGIKTIEANVRGLVTR KLTQ KA  AL +LKGVLDY+EFKDVDMVIEAVIE V L
Sbjct: 340 EYLQKGIKTIEANVRGLVTRKKLTQQKAEGALSLLKGVLDYAEFKDVDMVIEAVIEKVSL 399

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS+LEK CPPHCILA+NTSTIDLNI+GEK SSQDR+IGAHFFSPAH+MPLLEIVRT
Sbjct: 400 KQDIFSDLEKICPPHCILASNTSTIDLNIIGEKISSQDRVIGAHFFSPAHIMPLLEIVRT 459

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +TSAQVILDL+TVGKIIKK PVVVGNCTGFAVNR FFPY+Q A  L +LGVDVFRID  
Sbjct: 460 NKTSAQVILDLVTVGKIIKKSPVVVGNCTGFAVNRTFFPYAQGAHFLANLGVDVFRIDRL 519

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FGLP+GPFQL DL+GYGVA A  KEF  +F  R+F +PL+DLL+KSGRNGK NGKG 
Sbjct: 520 ISNFGLPMGPFQLQDLSGYGVAVAVGKEFAGSFAGRTFPTPLLDLLIKSGRNGKNNGKGY 579

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGSKPKPDPSVLPI+EE RRLSNIMP GKPIS+T++EIVEMILFPVVNE+CRVLEE
Sbjct: 580 YIYEKGSKPKPDPSVLPIVEESRRLSNIMPNGKPISITDQEIVEMILFPVVNEACRVLEE 639

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GIV+RASDLD ASVLGMSFPSYRGGIVFWAD VGA ++Y+SLKKWSQLYGNF+KPSR+LE
Sbjct: 640 GIVIRASDLDIASVLGMSFPSYRGGIVFWADLVGAKHIYSSLKKWSQLYGNFYKPSRYLE 699

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERATKGIPLSAP SS+ TS+ARL
Sbjct: 700 ERATKGIPLSAPASSNPTSKARL 722


>gi|315419009|gb|ADU15551.1| MFP [Gossypium hirsutum]
          Length = 721

 Score =  903 bits (2334), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/564 (79%), Positives = 508/564 (90%), Gaps = 5/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I SEEG KLGLIDA+V S+ELLKVS  WALD+A RRKPW+RSLHRTDK+GSLS
Sbjct: 162 MMLSSKPIMSEEGKKLGLIDALVPSKELLKVSCAWALDMAERRKPWLRSLHRTDKIGSLS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAREVL++ARLQAKKTAPN+PQHQ CLDVIEEGIVHGGYSGVLKEAKVFKE+V+ DTSRG
Sbjct: 222 EAREVLRMARLQAKKTAPNLPQHQVCLDVIEEGIVHGGYSGVLKEAKVFKEIVLSDTSRG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVF AQRATSKVPNVTD+GLKPR V+KVA+IGGGLMGSGIATA I+NNI+VVLKEVNS
Sbjct: 282 LVHVFLAQRATSKVPNVTDVGLKPRQVKKVAIIGGGLMGSGIATALIVNNIFVVLKEVNS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYLLKGIKT+EANVRGL  RGK+T+DKA  AL MLKGVLDYSEFKDVDMVIEAV+E+V L
Sbjct: 342 EYLLKGIKTVEANVRGLANRGKMTKDKAEKALSMLKGVLDYSEFKDVDMVIEAVVENVAL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFSE+EKACPPHCILATNTSTIDLN++GEK +SQDR++GAHFFSPAH+MPLLE VRT
Sbjct: 402 KQKIFSEIEKACPPHCILATNTSTIDLNLIGEKMNSQDRLVGAHFFSPAHLMPLLETVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDS 359
           ++ S Q+ILDLMTVGK+IKKVPVVVGNCTGFAVNR FFPY+Q   LLVSLGV D +RID 
Sbjct: 462 QKASPQIILDLMTVGKVIKKVPVVVGNCTGFAVNRTFFPYTQGPHLLVSLGVDDAYRIDR 521

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            I +FG P+GPFQL DLAGYGVA A  +E+ KAF DR F+SPL++LL K GRNGK NGKG
Sbjct: 522 VICNFGFPLGPFQLQDLAGYGVAFAVGQEYAKAFSDRIFKSPLLELLAKDGRNGKNNGKG 581

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y YEKGSKPKPDPSVL IIEE RRL+NIMPGGKPISVT++E++EMILFPVVNE+CRVL+
Sbjct: 582 YYIYEKGSKPKPDPSVLSIIEESRRLTNIMPGGKPISVTDREVLEMILFPVVNEACRVLD 641

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG+VVRASDLD ASVLGMSFPSYRGGIVFWAD VGAN+VY +LKKWS   GN +KPS+FL
Sbjct: 642 EGVVVRASDLDVASVLGMSFPSYRGGIVFWADMVGANHVYRNLKKWS---GN-YKPSKFL 697

Query: 540 EERATKGIPLSAPVSSSSTSRARL 563
           EERA KGIPLSAP +SS+++++RL
Sbjct: 698 EERAMKGIPLSAPATSSASTKSRL 721


>gi|449443155|ref|XP_004139346.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
           protein AIM1-like [Cucumis sativus]
          Length = 724

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/563 (75%), Positives = 495/563 (87%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK+ITSEEG KLGLIDAVV+  EL+KV+R WALDIA RRKPWIR+LHRTD++GSL+
Sbjct: 162 MMLLSKTITSEEGEKLGLIDAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLA 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VLK AR QAKK APN PQ  AC+DVIE+GI+HGGYSGVLKE KVF+ELV  DT++G
Sbjct: 222 EARSVLKSAREQAKKIAPNTPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QR  SKVPNVTD GLKPR V+KVA+IGGGLMGSGIATA IL+NI+VV+KE+N 
Sbjct: 282 LVHVFFSQRLISKVPNVTDRGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINP 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYL KGIKTIEAN+RGLV +GKLTQDKAN AL +LKG LDYS+FKDVDMVIEA +E+VPL
Sbjct: 342 EYLQKGIKTIEANLRGLVVKGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFSE+EK CP HCILATNTSTIDLN+VGEKT S DRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 402 KQKIFSEIEKICPAHCILATNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS QVILDLMTVGKIIKKVPVVVGNCTGFAVNR FFPY Q+A+LLV LGVD+FRID  
Sbjct: 462 EKTSPQVILDLMTVGKIIKKVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRV 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FGLP+GPFQL DL+GYGVA A  KEF  +FPDR   SPLVDL+ K+GR+GK NGKG 
Sbjct: 522 ITNFGLPLGPFQLQDLSGYGVATAVGKEFSASFPDRVLFSPLVDLMRKNGRDGKNNGKGY 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGS+PKPDPS+ PI+EE RR++N+MP GKPI++++++I+EM+LFPVVNE CRV+EE
Sbjct: 582 YIYEKGSRPKPDPSIAPILEETRRIANLMPSGKPIAISDQQILEMVLFPVVNEGCRVVEE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GIVVR SDL+ A+VLGMSFPSYRGG++FW D VG  +VY SLKKWS+ YG+FFKPS++LE
Sbjct: 642 GIVVRPSDLNVATVLGMSFPSYRGGLLFWGDLVGPKHVYASLKKWSEQYGDFFKPSKYLE 701

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA KGIPLS  +S ++ SR++L
Sbjct: 702 ERAAKGIPLSEAISENAASRSKL 724


>gi|449515444|ref|XP_004164759.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
           protein AIM1-like [Cucumis sativus]
          Length = 719

 Score =  888 bits (2294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/563 (74%), Positives = 490/563 (87%), Gaps = 5/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK+ITSEEG KLGLIDAVV+  EL+KV+R WALDIA RRKPWIR+LHRTD++GSL+
Sbjct: 162 MMLLSKTITSEEGEKLGLIDAVVSPNELMKVARKWALDIAERRKPWIRTLHRTDRIGSLA 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VLK AR QAKK APN PQ  AC+DVIE+GI+HGGYSGVLKE KVF+ELV  DT++G
Sbjct: 222 EARSVLKSAREQAKKIAPNTPQQLACIDVIEDGIIHGGYSGVLKEDKVFRELVATDTAKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF       VPNVTD GLKPR V+KVA+IGGGLMGSGIATA IL+NI+VV+KE+N 
Sbjct: 282 LVHVFFPS-----VPNVTDRGLKPRNVKKVAIIGGGLMGSGIATAFILSNIHVVVKEINP 336

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYL KGIKTIEAN+RGLV +GKLTQDKAN AL +LKG LDYS+FKDVDMVIEA +E+VPL
Sbjct: 337 EYLQKGIKTIEANLRGLVVKGKLTQDKANKALLILKGSLDYSDFKDVDMVIEAAVENVPL 396

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFSE+EK CP HCILATNTSTIDLN+VGEKT S DRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 397 KQKIFSEIEKICPAHCILATNTSTIDLNLVGEKTRSMDRIIGAHFFSPAHVMPLLEIVRT 456

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS QVILDLMTVGKIIKKVPVVVGNCTGFAVNR FFPY Q+A+LLV LGVD+FRID  
Sbjct: 457 EKTSPQVILDLMTVGKIIKKVPVVVGNCTGFAVNRTFFPYVQAAQLLVHLGVDLFRIDRV 516

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FGLP+GPFQL DL+GYGVA A  KEF  +FPDR   SPLVDL+ K+GR+GK NGKG 
Sbjct: 517 ITNFGLPLGPFQLQDLSGYGVATAVGKEFSASFPDRVLFSPLVDLMRKNGRDGKNNGKGY 576

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGS+PKPDPS+ PI+EE RR++N+MP GKPI++++++I+EM+LFPVVNE CRV+EE
Sbjct: 577 YIYEKGSRPKPDPSIAPILEETRRIANLMPSGKPIAISDQQILEMVLFPVVNEGCRVVEE 636

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GIVVR SDL+ A+VLGMSFPSYRGG++FW D VG  +VY SLKKWS+ YG+FFKPS++LE
Sbjct: 637 GIVVRPSDLNVATVLGMSFPSYRGGLLFWGDLVGPKHVYASLKKWSEQYGDFFKPSKYLE 696

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA KGIPLS  +S ++ SR++L
Sbjct: 697 ERAAKGIPLSEAISENAASRSKL 719


>gi|297799088|ref|XP_002867428.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313264|gb|EFH43687.1| hypothetical protein ARALYDRAFT_491857 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 721

 Score =  872 bits (2253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/563 (73%), Positives = 489/563 (86%), Gaps = 4/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+LLSKSI+SEEG KLGLIDA+V   ++L  SR WALDIA  RKP++RSLHRTDK+GSLS
Sbjct: 163 MILLSKSISSEEGQKLGLIDALVPPGDVLSTSRKWALDIADGRKPFLRSLHRTDKIGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR +LK +R  AKK APNMPQH AC++VIEEGIVHGGYSGVLKEA+VFK+LV+ DT++G
Sbjct: 223 EARAILKNSRQLAKKVAPNMPQHHACIEVIEEGIVHGGYSGVLKEAEVFKQLVLSDTAKG 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQRATSKVPNVTD+GLKPR ++KVAVIGGGLMGSGI TA +L+NI VVLKE+NS
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGITTALLLSNIRVVLKEINS 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYL+KG K++EAN++GLV+RGKLTQDKA  AL + KGVLDY+EFKDVDMVIEAVIE++ L
Sbjct: 343 EYLMKGTKSVEANIKGLVSRGKLTQDKAGKALSLFKGVLDYTEFKDVDMVIEAVIENIQL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF E+EK C PHCILA+NTSTIDL+++GEKT+S+DRI+GAHFFSPAH+M LLEIVR+
Sbjct: 403 KQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMTLLEIVRS 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TSAQVILDLM VGK IKKVPVVVGNC GFAVNR FFPY+Q+A +L +LGVD+FRIDS 
Sbjct: 463 KNTSAQVILDLMAVGKAIKKVPVVVGNCIGFAVNRTFFPYTQAAHMLANLGVDLFRIDSV 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFGLP+GPFQL DLAG+G+  A    + K + DR F+SP+ +LLLKSGRNGK NGKG 
Sbjct: 523 ITSFGLPLGPFQLGDLAGHGIGLAVGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGKGY 582

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGSKPKPDPSVL I+EE R+L+NIMPGGKPISV++KEIVEMILFPVVNE+CRVL+E
Sbjct: 583 YIYEKGSKPKPDPSVLSIVEESRKLTNIMPGGKPISVSDKEIVEMILFPVVNEACRVLDE 642

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+V+RASDLD ASVLGMSFPSYRGGIVFWAD VG  Y+Y  LK+ S+ YG+FFKPSR+LE
Sbjct: 643 GVVIRASDLDIASVLGMSFPSYRGGIVFWADTVGPKYIYERLKRLSETYGSFFKPSRYLE 702

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA  G+ L    S S +SR+RL
Sbjct: 703 ERAMNGMLL----SESKSSRSRL 721


>gi|15235527|ref|NP_194630.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
           thaliana]
 gi|75315624|sp|Q9ZPI6.1|AIM1_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
           protein AIM1; AltName: Full=Protein ABNORMAL
           INFLORESCENCE MERISTEM 1; Short=AtAIM1; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|4337025|gb|AAD18041.1| AIM1 protein [Arabidopsis thaliana]
 gi|4972047|emb|CAB43915.1| AIM1 protein [Arabidopsis thaliana]
 gi|7269799|emb|CAB79659.1| AIM1 protein [Arabidopsis thaliana]
 gi|16648891|gb|AAL24297.1| AIM1 protein [Arabidopsis thaliana]
 gi|18175606|gb|AAL59895.1| putative AIM1 protein [Arabidopsis thaliana]
 gi|20465649|gb|AAM20293.1| putative AIM1 protein [Arabidopsis thaliana]
 gi|332660172|gb|AEE85572.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
           thaliana]
          Length = 721

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/563 (73%), Positives = 490/563 (87%), Gaps = 4/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+LLSKSI+SEEG KLGLIDA+V   ++L  SR WALDIA  RKP+++SLHRTDK+GSLS
Sbjct: 163 MILLSKSISSEEGHKLGLIDALVPPGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR +LK +R  AKK APNMPQH AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++G
Sbjct: 223 EARAILKNSRQLAKKIAPNMPQHHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKG 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQRATSKVPNVTD+GLKPR ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NS
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINS 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E+L+KGIK++EAN++ LV+RGKLTQDKA  AL + KGVLDY+EF DVDMVIEAVIE++ L
Sbjct: 343 EFLMKGIKSVEANMKSLVSRGKLTQDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF E+EK C PHCILA+NTSTIDL+++GEKT+S+DRI+GAHFFSPAH+MPLLEIVR+
Sbjct: 403 KQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRS 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TSAQVILDLM VGK IKKVPVVVGNC GFAVNR FFPYSQ+A +L +LGVD+FRIDS 
Sbjct: 463 KNTSAQVILDLMAVGKAIKKVPVVVGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSV 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFGLP+GPFQL DLAG+G+  A    + K + DR F+SP+ +LLLKSGRNGK NG+G 
Sbjct: 523 ITSFGLPLGPFQLGDLAGHGIGLAVGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGRGY 582

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKGSKPKPDPSVL I+E+ R+L+NIMPGGKPISVT+KEIVEMILFPVVNE+CRVL+E
Sbjct: 583 YIYEKGSKPKPDPSVLSIVEKSRKLTNIMPGGKPISVTDKEIVEMILFPVVNEACRVLDE 642

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+V+RASDLD ASVLGMSFPSYRGGIVFWAD VG  Y+Y  LKK S+ YG+FFKPSR+LE
Sbjct: 643 GVVIRASDLDIASVLGMSFPSYRGGIVFWADTVGPKYIYERLKKLSETYGSFFKPSRYLE 702

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA  G+ L    S S +SR++L
Sbjct: 703 ERAMNGMLL----SESKSSRSKL 721


>gi|147827212|emb|CAN66465.1| hypothetical protein VITISV_006222 [Vitis vinifera]
          Length = 859

 Score =  865 bits (2234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/602 (71%), Positives = 482/602 (80%), Gaps = 54/602 (8%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
            + LSKSI+SEEG+KLGL+DA+V+SEELLKVSR WALDI  +RKPW+RSLH+T+KLGS+S
Sbjct: 193 FLQLSKSISSEEGYKLGLVDAIVSSEELLKVSRRWALDIVDKRKPWVRSLHQTEKLGSVS 252

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVF----------- 109
           EA  +LK++R QA+KT P++PQHQACLDVIEEGIVHGGYSG+LKE KVF           
Sbjct: 253 EALXILKISRQQARKTVPHLPQHQACLDVIEEGIVHGGYSGLLKETKVFNXLVLSDTAKG 312

Query: 110 ---------------KELVMLDTSR----------------------------GLVHVFF 126
                          ++L+MLD S                             G +    
Sbjct: 313 LIHVFFAQRATSKALQKLLMLDPSLRTIYWLCWGQGPGHSCLCVGYLPIELPVGAITALM 372

Query: 127 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186
                  VPNVTDIGLKPR V+KVAVIGGGLMGSGIATA I +NIYVVLKEVNSEYLLKG
Sbjct: 373 QNLILGTVPNVTDIGLKPRNVKKVAVIGGGLMGSGIATALITSNIYVVLKEVNSEYLLKG 432

Query: 187 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 246
           IKTIEANVRGLVT+GKLTQDKA  AL MLKGVLDYSEFKD+DMVIEAVIE++ LKQKIFS
Sbjct: 433 IKTIEANVRGLVTKGKLTQDKARKALSMLKGVLDYSEFKDIDMVIEAVIENIXLKQKIFS 492

Query: 247 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 306
           E+EK C PHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSPAHVMPLLE+VRTE+TSAQ
Sbjct: 493 EIEKICSPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSPAHVMPLLEVVRTEKTSAQ 552

Query: 307 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 366
           VILDLMTVGK IKK+PVVVG+CTGFAVNR FFPY+Q A  LV+LGVD FRID  I +FGL
Sbjct: 553 VILDLMTVGKAIKKIPVVVGSCTGFAVNRTFFPYAQGAHFLVNLGVDPFRIDWVISNFGL 612

Query: 367 PIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKG 426
           P+GPFQL DL+GYGVA A  KEF  AF  R+F+SPLV+LLLK+GRNGK NGKG Y YEKG
Sbjct: 613 PMGPFQLQDLSGYGVAVAVGKEFATAFQGRTFESPLVNLLLKNGRNGKQNGKGYYIYEKG 672

Query: 427 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 486
           SKP+PDPSVLPIIEE RRL+NIMPGGKPISV  +EI+EMILFPVVNE+CRVL+EG+VVRA
Sbjct: 673 SKPRPDPSVLPIIEESRRLANIMPGGKPISVXNQEILEMILFPVVNEACRVLDEGVVVRA 732

Query: 487 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           SDLD  SVLGMSFPSYRGGIVFWAD VG  Y YT LKKWS +YG FFKPS +LE+RATKG
Sbjct: 733 SDLDITSVLGMSFPSYRGGIVFWADEVGPYYXYTCLKKWSAMYGTFFKPSSYLEQRATKG 792

Query: 547 IP 548
           IP
Sbjct: 793 IP 794


>gi|326524910|dbj|BAK04391.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525701|dbj|BAJ88897.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 728

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/564 (68%), Positives = 478/564 (84%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GLIDA+ + +EL+K+SR WAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 165 MMLQSKFITAKEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLS 224

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL +AR QA K A NMPQHQACLDVIEEG+++GG++GV+KEAKVFKELV+  TSR 
Sbjct: 225 EARAVLSMARQQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRA 284

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR+T+KVP VTDI LKPR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN 
Sbjct: 285 LVHVFFAQRSTTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 344

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G KTI  N+ GLV RG LT+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPL
Sbjct: 345 QFLQRGQKTIAGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPL 404

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF+++EK CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 405 KQSIFADIEKICPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 464

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID  
Sbjct: 465 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRI 524

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FG+P+GPFQL DLAGYGVA A    +  AF  R+F S LVDL+ ++GR GK+NGKG 
Sbjct: 525 ISNFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGY 584

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG++PKPDPSV  +I+E RR +  MPGGKP+++++++I+EM+ FPVVNE+CRV++E
Sbjct: 585 YLYEKGARPKPDPSVQNVIDEYRRQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDE 644

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RA+DLD ASVLGM FP YRGG++FWAD VGA+Y+++ L KW+++YG+FFKPS +LE
Sbjct: 645 NVVIRAADLDIASVLGMGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFFKPSLYLE 704

Query: 541 ERATKGIPLSAPVSSSSTS-RARL 563
           ERA  G PL+AP ++   S R+R+
Sbjct: 705 ERAKSGRPLAAPRTAHQVSTRSRM 728


>gi|326506022|dbj|BAJ91250.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 692

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/564 (68%), Positives = 478/564 (84%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GLIDA+ + +EL+K+SR WAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 129 MMLQSKFITAKEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLS 188

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL +AR QA K A NMPQHQACLDVIEEG+++GG++GV+KEAKVFKELV+  TSR 
Sbjct: 189 EARAVLSMARQQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRA 248

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR+T+KVP VTDI LKPR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN 
Sbjct: 249 LVHVFFAQRSTTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 308

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G KTI  N+ GLV RG LT+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPL
Sbjct: 309 QFLQRGQKTIAGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPL 368

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF+++EK CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 369 KQSIFADIEKICPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 428

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID  
Sbjct: 429 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRI 488

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FG+P+GPFQL DLAGYGVA A    +  AF  R+F S LVDL+ ++GR GK+NGKG 
Sbjct: 489 ISNFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGY 548

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG++PKPDPSV  +I+E RR +  MPGGKP+++++++I+EM+ FPVVNE+CRV++E
Sbjct: 549 YLYEKGARPKPDPSVQNVIDEYRRQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDE 608

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RA+DLD ASVLGM FP YRGG++FWAD VGA+Y+++ L KW+++YG+FFKPS +LE
Sbjct: 609 NVVIRAADLDIASVLGMGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFFKPSLYLE 668

Query: 541 ERATKGIPLSAPVSSSSTS-RARL 563
           ERA  G PL+AP ++   S R+R+
Sbjct: 669 ERAKSGRPLAAPRTAHQVSTRSRM 692


>gi|326525937|dbj|BAJ93145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 728

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/564 (68%), Positives = 477/564 (84%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GLIDA+ + +EL+K+SR WAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 165 MMLQSKFITAKEGKERGLIDALCSPDELIKMSRFWALEIANHRKPWIRSLGRTDRLGSLS 224

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL +AR QA K A NMPQHQACLDVIEEG+++GG++GV+KEAKVFKELV+  TSR 
Sbjct: 225 EARAVLSMARQQANKAAANMPQHQACLDVIEEGVLYGGHAGVVKEAKVFKELVVSTTSRA 284

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR+T+KVP VTDI LKPR +RKVAVIGGGLMGSGIATA ++ NI VVLKEVN 
Sbjct: 285 LVHVFFAQRSTTKVPGVTDIQLKPRNIRKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 344

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G KTI  N+ GLV RG LT+DK + A+ +LKG LDYS+FKDVDMVIEAVIE VPL
Sbjct: 345 QFLQRGQKTIAGNLEGLVKRGSLTKDKMSKAISLLKGALDYSDFKDVDMVIEAVIEKVPL 404

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF+++EK CPPHCILATNTSTID N+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 405 KQSIFADIEKICPPHCILATNTSTIDSNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 464

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q A+LLVSLG+D+FRID  
Sbjct: 465 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGAQLLVSLGIDLFRIDRI 524

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FG+P+GPFQL DLAGYGVA A    +  AF  R+F S LVDL+ ++GR GK+NGKG 
Sbjct: 525 ISNFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNFDSVLVDLMAETGRQGKSNGKGY 584

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG++PKPDPSV  +I+E RR +  MPGGKP+++++++I+EM+ FPVVNE+CRV++E
Sbjct: 585 YLYEKGARPKPDPSVQNVIDEYRRQAKTMPGGKPVTLSDQDILEMVFFPVVNEACRVMDE 644

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RA+DLD ASVLGM FP YRGG++FWAD VGA+Y+++ L KW+++YG+FFKPS +LE
Sbjct: 645 NVVIRAADLDIASVLGMGFPKYRGGLIFWADTVGASYIHSKLSKWAEMYGDFFKPSLYLE 704

Query: 541 ERATKGIPLSAPVSSSSTS-RARL 563
           ERA  G PL+AP ++   S R+R+
Sbjct: 705 ERAKSGRPLAAPRTAHQVSTRSRM 728


>gi|33338559|gb|AAQ13901.1| multifunctional protein [Oryza sativa]
          Length = 718

 Score =  825 bits (2132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/564 (68%), Positives = 475/564 (84%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GL+DA+ + +EL+K+SRLWAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 155 MMLQSKFITAKEGKERGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL  AR QAKK A N+PQHQACLDV+EEG++ GG++GVLKEAKVFKELV+  TS+ 
Sbjct: 215 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIATA +++N  VVLKEVN 
Sbjct: 275 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 334

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G K I AN+ GLV RG LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 335 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 394

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS+LEK CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 395 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 454

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGK+IKKVPVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID  
Sbjct: 455 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 514

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPFQL DLAGYGVA A    +  AF  R+  S LVDL++++GR GK+NGKG 
Sbjct: 515 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 574

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG KPKPDPSV  +I+E RR +  MPGGKP+++++++I+EMI FPVVNE+CRV++E
Sbjct: 575 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 634

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RASDLD AS+LGM FP +RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE
Sbjct: 635 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLE 694

Query: 541 ERATKGIPLSAP-VSSSSTSRARL 563
           +RA + +PLSAP  +  ++SR+R+
Sbjct: 695 DRAKRSLPLSAPNATQQASSRSRM 718


>gi|115445513|ref|NP_001046536.1| Os02g0274100 [Oryza sativa Japonica Group]
 gi|116257652|sp|Q8W1L6.2|MFP_ORYSJ RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
           protein; Short=MFP; Includes: RecName: Full=Enoyl-CoA
           hydratase/3-2-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|47848048|dbj|BAD21833.1| Peroxisomal fatty acid beta-oxidation multifunctional protein
           [Oryza sativa Japonica Group]
 gi|113536067|dbj|BAF08450.1| Os02g0274100 [Oryza sativa Japonica Group]
          Length = 726

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/564 (68%), Positives = 475/564 (84%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GL+DA+ + +EL+K+SRLWAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL  AR QAKK A N+PQHQACLDV+EEG++ GG++GVLKEAKVFKELV+  TS+ 
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIATA +++N  VVLKEVN 
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G K I AN+ GLV RG LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS+LEK CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGK+IKKVPVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID  
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPFQL DLAGYGVA A    +  AF  R+  S LVDL++++GR GK+NGKG 
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 582

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG KPKPDPSV  +I+E RR +  MPGGKP+++++++I+EMI FPVVNE+CRV++E
Sbjct: 583 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 642

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RASDLD AS+LGM FP +RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE
Sbjct: 643 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLE 702

Query: 541 ERATKGIPLSAP-VSSSSTSRARL 563
           +RA + +PLSAP  +  ++SR+R+
Sbjct: 703 DRAKRSLPLSAPNATQQASSRSRM 726


>gi|218190472|gb|EEC72899.1| hypothetical protein OsI_06722 [Oryza sativa Indica Group]
          Length = 726

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/564 (68%), Positives = 475/564 (84%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GL+DA+ + +EL+K+SRLWAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 163 MMLQSKFITAKEGKERGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR V+  AR QAKK A N+PQHQACLDV+EEG++ GG++GVLKEAKVFKELV+  TS+ 
Sbjct: 223 EARSVINSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIATA +++N  VVLKEVN 
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G K I AN+ GLV RG LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS+LEK CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGK+IKKVPVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID  
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPFQL DLAGYGVA A    +  AF  R+  S LVDL++++GR GK+NGKG 
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 582

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG KPKPDPSV  +I+E RR +  MPGGKP+++++++I+EMI FPVVNE+CRV++E
Sbjct: 583 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 642

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RASDLD AS+LGM FP +RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE
Sbjct: 643 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLE 702

Query: 541 ERATKGIPLSAP-VSSSSTSRARL 563
           +RA + +PLSAP  +  ++SR+R+
Sbjct: 703 DRAKRSLPLSAPNATQQASSRSRM 726


>gi|242061308|ref|XP_002451943.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
 gi|241931774|gb|EES04919.1| hypothetical protein SORBIDRAFT_04g010370 [Sorghum bicolor]
          Length = 727

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/564 (68%), Positives = 472/564 (83%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GLIDA+ + +EL+K SRLWAL+IA  RKPW+RSL RTD+LGSLS
Sbjct: 164 MMLQSKFITAKEGKERGLIDALCSPDELIKTSRLWALEIANCRKPWMRSLGRTDRLGSLS 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL  AR QA K APNMPQHQACLDV+EEGI++GG +GVLKEAKVFKELV+  TS+ 
Sbjct: 224 EARAVLNAARQQAMKIAPNMPQHQACLDVMEEGILYGGQAGVLKEAKVFKELVIAPTSKA 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR+T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIAT+ +++NI VVLKEVN 
Sbjct: 284 LVHVFFAQRSTTKVPGVTDVQLKPRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNP 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G K I  N+ GLV RG LT+D+ + A+ +LKG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 344 QFLQRGEKMIAGNLEGLVKRGSLTKDRMHKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS++EK CP HCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 404 KQSIFSDIEKICPKHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q + LLVSLG+DVFRID  
Sbjct: 464 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSLGIDVFRIDRV 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPFQL D+AGYGVA A    +  AF +R+  S LVDL++K GR GK NGKG 
Sbjct: 524 ISSFGMPMGPFQLQDVAGYGVALAVKGIYADAFGERNLNSNLVDLMVKDGRQGKVNGKGY 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG KPKPDPSV  ++EE ++ +N MPGGKP+++T+++I+EMI FPVVNE+CRV++E
Sbjct: 584 YIYEKGGKPKPDPSVKHVLEEYQKQANTMPGGKPVTLTDQDILEMIFFPVVNEACRVMDE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RASDLD ASVLGM FP YRGG+VFWAD VGA Y+++ L KW+++YG FFKPS +LE
Sbjct: 644 NVVIRASDLDIASVLGMGFPKYRGGLVFWADTVGAPYIHSKLSKWAEIYGPFFKPSSYLE 703

Query: 541 ERATKGIPLSAP-VSSSSTSRARL 563
           +RA  G+PLSA   S   ++R+R+
Sbjct: 704 QRAKSGVPLSAKGASQQGSARSRM 727


>gi|17105223|gb|AAL35606.1|AF442962_1 peroxisomal multifunctional protein [Oryza sativa]
          Length = 725

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/565 (67%), Positives = 473/565 (83%), Gaps = 4/565 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GL+DA+ + +EL+K+SRLWAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL  AR QAKK A N+PQHQACLDV+EEG++ GG++GVLKEAKVFKELV+  TS+ 
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIATA +++N  VVLKEVN 
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++  +G K I AN+ GLV RG LT+DK N A+ +LKG LDY +FKDVDMVIEAVIE +PL
Sbjct: 343 QFRQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYCDFKDVDMVIEAVIEKIPL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS+LEK CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGK+IKKVPVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID  
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEF-DKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           I SFG+P+GPFQL DLAGYGV    SK F   AF  R+  S LVDL++++GR GK+NGKG
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVHC--SKGFYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKG 580

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y YEKG KPKPDPSV  +I+E RR +  MPGGKP+++++++I+EMI FPVVNE+CRV++
Sbjct: 581 YYLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMD 640

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E +V+RASDLD AS+LGM FP +RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +L
Sbjct: 641 ENVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYL 700

Query: 540 EERATKGIPLSAP-VSSSSTSRARL 563
           E+RA + +PLSAP  +  ++SR+R+
Sbjct: 701 EDRAKRSLPLSAPNATQQASSRSRM 725


>gi|226510010|ref|NP_001148087.1| LOC100281695 [Zea mays]
 gi|195615714|gb|ACG29687.1| peroxisomal fatty acid beta-oxidation multifunctional protein [Zea
           mays]
          Length = 727

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/564 (67%), Positives = 468/564 (82%), Gaps = 1/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I ++EG + GLIDA+ +  EL+K SRLWAL+IA  RKPW+RSL RTD+L SLS
Sbjct: 164 MMLQSKFIAAKEGKERGLIDALCSPNELIKTSRLWALEIANCRKPWMRSLGRTDRLASLS 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL  AR QA K +PNMPQHQACLDV+EEGI++GG +GVLKEA+VFKELV+  TS+ 
Sbjct: 224 EARAVLNAARQQAMKVSPNMPQHQACLDVMEEGILYGGQAGVLKEARVFKELVVAPTSKA 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR+T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIAT+ +++NI VVLKEVN 
Sbjct: 284 LVHVFFAQRSTTKVPGVTDVQLKPRPIRKVAVIGGGLMGSGIATSLLVSNISVVLKEVNP 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G K I  N+ GL+ +G LT+D+ + A+ + KG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 344 QFLQRGEKMIAGNLEGLIKKGSLTKDRMHKAMSLFKGALDYSDFKDVDMVIEAVIEKIPL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IFS++EK CP HCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 404 KQSIFSDIEKICPKHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q++ LLVSLG+DVFRID  
Sbjct: 464 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQASHLLVSLGIDVFRIDRV 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPFQL D+AGYGVA A    +  AF +R+  S LV L++K GR GK N KG 
Sbjct: 524 ISSFGMPMGPFQLQDVAGYGVALAVKDIYADAFGERNLGSNLVGLMVKDGRQGKVNAKGY 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG+KPKPDPSV  +IEE R+ +N MPGGKP+++ +++I+EMI FPVVNE+CRV++E
Sbjct: 584 YIYEKGAKPKPDPSVKHVIEEYRKQANTMPGGKPVTLMDQDILEMIFFPVVNEACRVMDE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RASDLD ASVLGM FP YRGG+VFWAD VGA Y+++ L KW+++YG FFKPS +LE
Sbjct: 644 NVVIRASDLDIASVLGMGFPKYRGGLVFWADTVGAPYIHSKLSKWAEMYGPFFKPSSYLE 703

Query: 541 ERATKGIPLSAP-VSSSSTSRARL 563
           +RA  G+PLSAP  S   ++R+R+
Sbjct: 704 QRAKSGVPLSAPGTSQQGSARSRM 727


>gi|357141979|ref|XP_003572416.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
           protein-like [Brachypodium distachyon]
          Length = 726

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/552 (68%), Positives = 461/552 (83%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + G +DA+ + +EL+K+SR WAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 163 MMLQSKFITAKEGKERGFVDALCSPDELIKLSRFWALEIANCRKPWIRSLGRTDRLGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL +AR QAKK A NMPQHQACLDVIEEG+V GG++GV+KEAKVFKELV+  TS+ 
Sbjct: 223 EARAVLNMAREQAKKVALNMPQHQACLDVIEEGVVFGGHAGVVKEAKVFKELVLSTTSKA 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR+T+KVP VTDI +KPR ++KVAVIGGGLMGSGIATA ++ NI VVLKEVN 
Sbjct: 283 LVHVFFAQRSTTKVPGVTDIQIKPRQIKKVAVIGGGLMGSGIATALLVGNISVVLKEVNP 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G  TI  N+ GLV RG LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 343 QFLKRGQNTIAGNLEGLVKRGSLTKDKMNKAISLLKGALDYSDFKDVDMVIEAVIEKIPL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF+++EK CPPHCILATNTSTIDLN+VGEKT SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFADIEKICPPHCILATNTSTIDLNVVGEKTKSQDRIIGAHFFSPAHIMPLLEIVRT 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q ILDL+TVGKIIKKVPVVVGNCTGFAVNR FFPY+Q ++LLVSLG+D+FRID  
Sbjct: 463 EKTSPQAILDLITVGKIIKKVPVVVGNCTGFAVNRTFFPYTQGSQLLVSLGIDLFRIDRV 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPFQL D+AGYGVA A    +  AF  R+F S LV L+ + GR GK NGKG 
Sbjct: 523 ISSFGMPLGPFQLQDVAGYGVALAVKDIYAAAFGTRNFDSDLVVLMAEDGRQGKINGKGY 582

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YEKG KPKPDPSV  +I+E R+ +  MP GKP+++++++I+EM+ FPVVNE+CRV++E
Sbjct: 583 YLYEKGGKPKPDPSVQHVIDEYRKRAKTMPDGKPVTLSDQDILEMVFFPVVNEACRVMDE 642

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            +V+RASDLD ASVLGM FP YRGG++FWAD VGA+Y+Y+ L KW++LYG+FFKPS +LE
Sbjct: 643 NVVIRASDLDIASVLGMGFPKYRGGLIFWADTVGASYIYSKLTKWAELYGDFFKPSLYLE 702

Query: 541 ERATKGIPLSAP 552
           +RA  G  L AP
Sbjct: 703 DRAKSGRLLGAP 714


>gi|148910098|gb|ABR18131.1| unknown [Picea sitchensis]
          Length = 723

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/557 (65%), Positives = 455/557 (81%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSKSI SEEG KLGLIDAVV+  EL+  +R+WALDIA RR+PWI SL RTDKL SL 
Sbjct: 162 MMLLSKSIMSEEGNKLGLIDAVVSPGELMTTARMWALDIAERRRPWIISLKRTDKLESLG 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QAKKTAPN+P  Q CLDVIEEGIV GG +GVLKE K F ++V+ DT++G
Sbjct: 222 EAREILKFARAQAKKTAPNLPHPQLCLDVIEEGIVAGGLAGVLKEEKGFNDIVISDTAKG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FF+QRAT+KVP VTD+GLKPR ++KVAV+GGGLMGSGIAT+ +L+NI VVLKEVN+
Sbjct: 282 LVHFFFSQRATTKVPGVTDLGLKPRQIKKVAVLGGGLMGSGIATSLVLSNIPVVLKEVNA 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
            +L +GI  I AN++  V +G +T++K    + ++ GV+DY+EF++VDMVIEAV+E + L
Sbjct: 342 GFLQQGINRISANLKSRVKKGSMTEEKFEKTMSLITGVVDYAEFRNVDMVIEAVLEKISL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CP HCILATNTSTIDLN++G KT  QDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 402 KQEIFSDLEKICPAHCILATNTSTIDLNLIGAKTHVQDRIIGAHFFSPAHVMPLLEIVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS Q+I+DL+ VGK IKKVPVVVGNCTGFAVNR FFPY+Q+A +L +LGVD++RID  
Sbjct: 462 EKTSPQIIIDLINVGKNIKKVPVVVGNCTGFAVNRMFFPYTQAAHMLANLGVDIYRIDKV 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPF+L DL GYGV+    K+F  AF DR+F SPL  L++++ R G+ NGKG 
Sbjct: 522 ITSFGMPMGPFRLQDLVGYGVSLEVGKQFVTAFADRTFTSPLTQLMIENKRAGEKNGKGY 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++  + +P P V  IIE+  +++ IMPGGK + VT++EI+EMI FPVVNE+CRVL+E
Sbjct: 582 YVYDEKRRARPAPEVKEIIEQSIKITKIMPGGKAVVVTDREILEMIFFPVVNEACRVLDE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI  +ASDLD + VLGM FPSYRGGIVFWAD+VGA ++Y+SLKKW + YG  FKP  +LE
Sbjct: 642 GIASKASDLDVSVVLGMGFPSYRGGIVFWADSVGAGHIYSSLKKWYESYGGLFKPCAYLE 701

Query: 541 ERATKGIPLSAPVSSSS 557
           ERA +GIPLSAPV++ +
Sbjct: 702 ERAARGIPLSAPVAAKN 718


>gi|116787358|gb|ABK24476.1| unknown [Picea sitchensis]
          Length = 726

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/555 (60%), Positives = 434/555 (78%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+LLSK I SEE  +LGL+DAVV   ELL  +R WALDIA  R+PWIRSL+RTDKL  L 
Sbjct: 167 MILLSKPIKSEEASELGLVDAVVPPLELLNSARRWALDIAEFRRPWIRSLYRTDKLEPLG 226

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR+QA+K A N+     CLDVIEEGIV G  +G++KE   F++L+  D ++ 
Sbjct: 227 EAREILKFARIQAQKRAANLKHPLVCLDVIEEGIVSGPMAGLVKEVSSFQQLLHSDNAKA 286

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFF+QR TSKVP VTD+GLKPR VRKVAV+GGGLMGSGIATA IL+   V+LKEVN 
Sbjct: 287 LIHVFFSQRLTSKVPGVTDVGLKPRRVRKVAVLGGGLMGSGIATALILSGYPVILKEVND 346

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
            +L  G++ I+AN++  V +GK++Q+K      ++ G +DY  F++VD+VIEAVIE+V L
Sbjct: 347 RFLQAGLERIKANLQSRVNKGKMSQEKFEKIFSLVHGTVDYENFRNVDIVIEAVIENVAL 406

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHC+LATNTSTIDL+++G+KT+SQDRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 407 KQQIFSDLEKFCPPHCVLATNTSTIDLSLIGQKTNSQDRIVGAHFFSPAHIMPLLEIVRT 466

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS QVI+DLM VGK IKK P+VVGNCTGFAVNR FFPY+QSA  L  LG+DV+RID  
Sbjct: 467 EKTSPQVIVDLMDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFLTDLGLDVYRIDIV 526

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I SFG+P+GPF+L DL G+ VA AT  ++ + FP+R ++S L+ ++L+  R G+   KG 
Sbjct: 527 ITSFGMPMGPFRLADLVGFEVAVATGMQYLENFPERVYKSLLIPIMLEDKRAGEKTRKGF 586

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K +PDP +   IE+ R ++ ++  GKP+S+ +K+IVEM+ FPVVNE+CRVL E
Sbjct: 587 YLYDDRRKARPDPEIKKYIEKSRSMAGLIADGKPLSLMDKDIVEMVFFPVVNEACRVLGE 646

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+ASDLD ASV+GM FP YRGG++FWAD++G+NY+Y+ LK W++ YG+FFKP  FLE
Sbjct: 647 GITVQASDLDIASVMGMGFPPYRGGVMFWADSLGSNYIYSKLKIWAESYGDFFKPCPFLE 706

Query: 541 ERATKGIPLSAPVSS 555
           ERA  G  LSAPV S
Sbjct: 707 ERAATGSKLSAPVKS 721


>gi|302792475|ref|XP_002978003.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
 gi|300154024|gb|EFJ20660.1| hypothetical protein SELMODRAFT_176660 [Selaginella moellendorffii]
          Length = 721

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/558 (60%), Positives = 440/558 (78%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK +TSEEG +LGL+D +V +E +L  +R  A+DIA  R+PW  +LH+TDKL  L 
Sbjct: 162 MMLLSKPVTSEEGKELGLVDELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLG 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA KTAP +     CLD IEEGIV GG++G+LKE K F+E +  D S+ 
Sbjct: 222 EAREILKFARAQAMKTAPKLTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKS 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFAQR+TSKVP VTD+GLKP+ V+KVAVIGGG MGSGI TA IL+NI VVLKEVNS
Sbjct: 282 LTHIFFAQRSTSKVPGVTDVGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G+  ++ N++  V +GKL++DK   A+ +++GVLDY +F  VD+VIEAV+E+V L
Sbjct: 342 DFLQQGLNRVKGNLQSRVKKGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK C P C+LA+NTSTIDLN+VG KT +QDRIIGAHFFSPAHVMPLLE+VRT
Sbjct: 402 KQQIFADLEKFCSPSCVLASNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS QVILDLMT+GK IKK+PVVVGNCTGFAVNR FFPY+Q+A +L+ LGVD +RID A
Sbjct: 462 EKTSPQVILDLMTLGKTIKKIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGVDPYRIDRA 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L D  G+GVA A  +++  +FP+R + S +  L+    R G+ N KG 
Sbjct: 522 ITGFGMPMGPFRLADFVGFGVAVAVGQQYLNSFPERVYVSQIFPLMFSDKRLGEGNRKGF 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++  KP+P P +   +++ R+L+ +MPGGKPI++T+KEIVEMILFPVVNE+CRVLEE
Sbjct: 582 YLYDEKRKPRPAPELQGYVDKSRQLAKLMPGGKPINITDKEIVEMILFPVVNEACRVLEE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+VV+ASDLD A+VLGM FP Y+GG+VFWAD +GA Y+ + LK+WS+ YG FF+PS FL+
Sbjct: 642 GVVVKASDLDIATVLGMGFPPYKGGLVFWADMIGAGYIASKLKEWSETYGKFFQPSPFLQ 701

Query: 541 ERATKGIPLSAPVSSSST 558
            RA++G  LS PV S  +
Sbjct: 702 ARASQGGKLSDPVKSGKS 719


>gi|302766649|ref|XP_002966745.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
 gi|300166165|gb|EFJ32772.1| hypothetical protein SELMODRAFT_168461 [Selaginella moellendorffii]
          Length = 721

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/558 (60%), Positives = 440/558 (78%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK +TSEEG +LGL+D +V +E +L  +R  A+DIA  R+PW  +LH+TDKL  L 
Sbjct: 162 MMLLSKPVTSEEGKELGLVDELVPAEAVLTTARKVAVDIAEGRRPWCITLHKTDKLEPLG 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA KTAP +     CLD IEEGIV GG++G+LKE K F+E +  D S+ 
Sbjct: 222 EAREILKFARAQAMKTAPKLTHPHVCLDAIEEGIVKGGFAGLLKEEKAFQEALFSDASKS 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFAQR+TSKVP VTD+GLKP+ V+KVAVIGGG MGSGI TA IL+NI VVLKEVNS
Sbjct: 282 LTHIFFAQRSTSKVPGVTDVGLKPKVVKKVAVIGGGFMGSGIVTALILSNIKVVLKEVNS 341

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G+  ++ N++  V +GKL++DK   A+ +++GVLDY +F  VD+VIEAV+E+V L
Sbjct: 342 DFLQQGLNRVKGNLQSRVKKGKLSKDKFERAISLVEGVLDYEQFGSVDVVIEAVVENVGL 401

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK C P C+LA+NTSTIDLN+VG KT +QDRIIGAHFFSPAHVMPLLE+VRT
Sbjct: 402 KQQIFADLEKFCSPSCVLASNTSTIDLNVVGSKTKAQDRIIGAHFFSPAHVMPLLEVVRT 461

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS QVILDLMT+GK IKK+PVVVGNCTGFAVNR FFPY+Q+A +L+ LG+D +RID A
Sbjct: 462 EKTSPQVILDLMTLGKTIKKIPVVVGNCTGFAVNRVFFPYTQAATMLLDLGIDPYRIDRA 521

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L D  G+GVA A  +++  +FP+R + S +  L+    R G+ N KG 
Sbjct: 522 ITGFGMPMGPFRLADFVGFGVAVAVGQQYLNSFPERVYVSQIFPLMFSDKRLGEGNRKGF 581

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++  KP+P P +   +++ R+L+ +MPGGKPI++T+KEIVEMILFPVVNE+CRVLEE
Sbjct: 582 YLYDEKRKPRPAPELQGYVDKSRQLAKLMPGGKPINITDKEIVEMILFPVVNEACRVLEE 641

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+VV+ASDLD A+VLGM FP Y+GG+VFWAD +GA Y+ + LK+WS+ YG FF+PS FL+
Sbjct: 642 GVVVKASDLDIATVLGMGFPPYKGGLVFWADMIGAGYIASKLKEWSETYGKFFQPSPFLQ 701

Query: 541 ERATKGIPLSAPVSSSST 558
            RA++G  LS PV S  +
Sbjct: 702 ARASQGGKLSDPVKSGKS 719


>gi|224107106|ref|XP_002314377.1| predicted protein [Populus trichocarpa]
 gi|222863417|gb|EEF00548.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/558 (58%), Positives = 423/558 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE   LGL+DAVV+  EL+  +R WALDI  RR+PWI SL++T+KL SL 
Sbjct: 167 MMLTSKPVKGEEAHALGLVDAVVSPNELVSTARQWALDILERRRPWIASLYKTEKLDSLG 226

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+ K AR Q +K APN+     C+DVIE GIV G   G+ KE + F ELV  DT + 
Sbjct: 227 EAREIFKFAREQVRKRAPNLTHPIVCIDVIEHGIVSGPRDGLYKELESFHELVRSDTCKS 286

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+FFAQR T+KVP +TD+GL PR V+KVAV+GGGLMGSGIATA +L+N  V+LKEVN+
Sbjct: 287 LIHIFFAQRGTTKVPGITDLGLVPRRVKKVAVLGGGLMGSGIATALVLSNYPVILKEVNN 346

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +G++TQ+K    + +LKG LDY  FKDVDMVIEAVIE+V L
Sbjct: 347 QFLQAGIGRVRANLQSRVKKGRMTQEKFEKTMSLLKGALDYESFKDVDMVIEAVIENVSL 406

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHCILA+NTSTIDLN++G++T SQDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 407 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRT 466

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS QVI+DL+ VGK I+K PVVVGNCTGFAVNR FFPY+Q+A LLV  G D+++ID  
Sbjct: 467 KQTSPQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAALLLVEHGADLYQIDKV 526

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L+DL G+GVA AT  +F   FP+R+++S L+ L+ +  R G+   KG 
Sbjct: 527 ITKFGMPMGPFRLVDLVGFGVAIATGTQFVVNFPERTYKSMLIPLMQEDKRAGETTRKGF 586

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K KPDP +   IE+ R +S +    K   + EK+IVEMI FPVVNE+CRV  E
Sbjct: 587 YLYDDRRKAKPDPELRKYIEKARNISGVANDPKLAKLPEKDIVEMIFFPVVNEACRVFAE 646

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD +S++GM FP YRGGI+FWAD++G+ Y+Y+ L++WS+ YG FFKP  FL 
Sbjct: 647 GIAVKAADLDISSLMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSKTYGEFFKPCAFLA 706

Query: 541 ERATKGIPLSAPVSSSST 558
           ERA KG PLS+PV  + +
Sbjct: 707 ERAAKGAPLSSPVDQAKS 724


>gi|449522795|ref|XP_004168411.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like isoform 2 [Cucumis sativus]
 gi|34922495|sp|Q39659.1|MFPA_CUCSA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a; Includes: RecName: Full=Enoyl-CoA
           hydratase/3-2-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|551428|emb|CAA55630.1| tetrafunctional protein [Cucumis sativus]
          Length = 725

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/552 (59%), Positives = 425/552 (76%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I  +E   LGL+DA+V  EEL+  +R WAL+I  RR+PW+ SLHRTDKL SL+
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR++  LAR QAKK  PN+    AC+D +E G+V G  +G+ KEA+ F+ L+  DT + 
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+FFAQR+T+KVP VTD+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN 
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 345

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +G +T +K   ++ +LKGVL+Y  FKDVDMVIEAVIE+V L
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHC+LATNTSTIDL ++GE+  S+DRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+AQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPYSQ+A LL   GVD ++ID A
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVAAAT+ +F +AFP+R+++S L+ L+ +    G++  KG 
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 585

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+K  K  P+P +   IE+ R  S +    K   + EK+IVEMI FPVVNE+CRVL E
Sbjct: 586 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 645

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A V+GM FPSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP  +L 
Sbjct: 646 GIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLA 705

Query: 541 ERATKGIPLSAP 552
           ERA +G  LSAP
Sbjct: 706 ERAVQGATLSAP 717


>gi|551444|emb|CAA55910.1| protein MFP-b [Cucumis sativus]
          Length = 633

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/552 (59%), Positives = 425/552 (76%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I  +E   LGL+DA+V  EEL+  +R WAL+I  RR+PW+ SLHRTDKL SL+
Sbjct: 74  MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 133

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR++  LAR QAKK  PN+    AC+D +E G+V G  +G+ KEA+ F+ L+  DT + 
Sbjct: 134 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 193

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+FFAQR+T+KVP VTD+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN 
Sbjct: 194 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 253

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +G +T +K   ++ +LKGVL+Y  FKDVDMVIEAVIE+V L
Sbjct: 254 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 313

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHC+LATNTSTIDL ++GE+  S+DRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 314 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 373

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+AQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPYSQ+A LL   GVD ++ID A
Sbjct: 374 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 433

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVAAAT+ +F +AFP+R+++S L+ L+ +    G++  KG 
Sbjct: 434 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 493

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+K  K  P+P +   IE+ R  S +    K   + EK+IVEMI FPVVNE+CRVL E
Sbjct: 494 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 553

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A V+GM FPSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP  +L 
Sbjct: 554 GIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLA 613

Query: 541 ERATKGIPLSAP 552
           ERA +G  LSAP
Sbjct: 614 ERAVQGATLSAP 625


>gi|168025753|ref|XP_001765398.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683451|gb|EDQ69861.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 722

 Score =  693 bits (1789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/558 (59%), Positives = 432/558 (77%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK I SEEG +LGLID +V+ ++LL  +R WALDIA+ +KP + SLHRTDKL SL 
Sbjct: 163 MMLLSKPIASEEGKQLGLIDEIVSPKDLLVTARQWALDIASGKKPRLSSLHRTDKLESLG 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE++K AR Q K+TAPN+     CLD +EEG++ GGY+G LKEA+ F   V+ D ++G
Sbjct: 223 EAREIIKFARAQVKRTAPNLTHPLLCLDAVEEGVIAGGYAGNLKEAEAFAAAVVSDNAKG 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LV+VFFAQRAT+KVP + ++GLKPR ++ VAV+GGGLMGSGI TA +L+   V+LKE+N 
Sbjct: 283 LVNVFFAQRATTKVPGIAELGLKPRKIQNVAVVGGGLMGSGIVTALVLSGYSVILKEIND 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +GK++Q+K    L ++KGVL Y  FK VDMVIEAVIE++ L
Sbjct: 343 KFLQAGLGRVKANLQSRVKKGKMSQEKFEKTLSLVKGVLTYDVFKSVDMVIEAVIENIDL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF +LEK C   CILATNTSTIDLN+VG KT SQDR+IGAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFVDLEKNCKNDCILATNTSTIDLNLVGAKTRSQDRLIGAHFFSPAHIMPLLEIVRT 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS Q I+DLM +GK IKK PV+VGNCTGFAVNR FFPY+ +A +L  LGVD++RID+A
Sbjct: 463 DKTSPQAIVDLMALGKAIKKTPVLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNA 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I+S+G+P+GPF+L DL G+GV AA   +F KAFPDR + S L+  +L++ R G+ N KG 
Sbjct: 523 IKSWGMPMGPFRLTDLVGFGVGAAVGAQFVKAFPDRVYVSKLLPRMLEAQRLGEQNRKGF 582

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++  K +P P +  II+E +  S IMP GKP+++T+K+IVEMI+FPVVNE+CRVL E
Sbjct: 583 YVYDEKRKARPAPEIKEIIKESQAESGIMPNGKPLAMTDKDIVEMIMFPVVNEACRVLAE 642

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            IVV+ASDLD ASVLGM FP YRGGIV WAD VGA Y+ + L  W++ YG FFKP  FLE
Sbjct: 643 KIVVQASDLDIASVLGMGFPPYRGGIVCWADIVGAKYICSRLDTWARAYGGFFKPCAFLE 702

Query: 541 ERATKGIPLSAPVSSSST 558
           ERA  G+ LSAP++ + +
Sbjct: 703 ERAASGVRLSAPINDTKS 720


>gi|297829230|ref|XP_002882497.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328337|gb|EFH58756.1| hypothetical protein ARALYDRAFT_478006 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 723

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/558 (58%), Positives = 422/558 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L SK + +EEG  LGLIDAV+   ELL  +R WALDI  RRKPW+ S+ +TDKL SL 
Sbjct: 164 MILTSKPVKAEEGHSLGLIDAVMPPAELLTTARRWALDIVERRKPWVSSVSKTDKLPSLG 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR Q +K APNM     CLD IE GIV G  +G+ KEA+V  ++V LDT++ 
Sbjct: 224 EAREILKFARGQTQKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFF+QR T+KVP VTD GL PR ++KVA+IGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 284 LIHVFFSQRGTAKVPGVTDRGLAPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++  V +G ++Q+K    + +LKG LDY  F+DVDMVIEAVIE++ L
Sbjct: 344 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CP HCILA+NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 404 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TSAQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+Q+A  LV  G D + ID A
Sbjct: 464 NHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRA 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT+ +F + F +R+++S ++ L+ +  R G+A  KG 
Sbjct: 524 ISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K KPDP +   IE+ R +S +    K  +++EKEI+EM  FPVVNE+CRV  E
Sbjct: 584 YLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKEIIEMTFFPVVNEACRVFAE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A ++GM FP YRGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP  FL 
Sbjct: 644 GIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKTYGEFFKPCAFLA 703

Query: 541 ERATKGIPLSAPVSSSST 558
           ER +KG+PLSAPV  +S+
Sbjct: 704 ERGSKGVPLSAPVKQASS 721


>gi|34922417|sp|O49809.2|MFPA_BRANA RecName: Full=Glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a; Includes: RecName: Full=Enoyl-CoA
           hydratase/3-2-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|2832898|emb|CAA04386.1| Tetrafunctional protein of glyoxysomal fatty acid beta-oxidation
           [Brassica napus]
          Length = 725

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/563 (58%), Positives = 424/563 (75%), Gaps = 3/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L SK + +EEG  LGLIDAVV   ELL  +R WALDIA RRKPW+ S+ +TDKL  L 
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLG 225

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK A+ Q ++ APNM     CL+ +E GIV G  +G+ KEA+V  E++ LDT++G
Sbjct: 226 EAREILKFAKDQTRRQAPNMKHPLMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKG 285

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFF+QR T+KVP VTD GL PR + KVA+IGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 286 LIHVFFSQRGTTKVPGVTDRGLVPRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNE 345

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++  V +GK++++K    + +LKG LDY  F+DVDMVIEAVIE++ L
Sbjct: 346 KFLEAGIGRVKANLQSRVKKGKMSKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CP HCILA+NTSTIDLN +GE+T SQDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRT 465

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TSAQVI+DL+ VGK I+K PVVVGNCTGFAVNR FFPY+Q+A  LV  G D + ID A
Sbjct: 466 NHTSAQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKA 525

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF+L DL G+GVA AT+ +F + FP+R+++S ++ L+ +  R G+A  KG 
Sbjct: 526 VSKFGMPMGPFRLCDLVGFGVAIATATQFIENFPERTYKSMIIPLMQEDKRAGEATRKGF 585

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K KPDP +   I++ R +S   P  K   ++EKEI+EM  FPVVNE+CRV  E
Sbjct: 586 YLYDDRRKAKPDPEIKNYIDKARSVSGAKPDPKLEKLSEKEIIEMTFFPVVNEACRVFAE 645

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A + GM FP YRGGI+FWAD++G+ Y+Y+ L++WS+ YG FFKP  FL 
Sbjct: 646 GIAVKAADLDIAGIFGMGFPPYRGGIMFWADSIGSKYIYSKLEEWSKAYGEFFKPCAFLA 705

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ER +KG PLSAP+     SR+RL
Sbjct: 706 ERGSKGAPLSAPLEQ---SRSRL 725


>gi|449522793|ref|XP_004168410.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like isoform 1 [Cucumis sativus]
          Length = 794

 Score =  689 bits (1779), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/549 (58%), Positives = 422/549 (76%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I  +E   LGL+DA+V  EEL+  +R WAL+I  RR+PW+ SLHRTDKL SL+
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR++  LAR QAKK  PN+    AC+D +E G+V G  +G+ KEA+ F+ L+  DT + 
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+FFAQR+T+KVP VTD+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN 
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 345

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +G +T +K   ++ +LKGVL+Y  FKDVDMVIEAVIE+V L
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHC+LATNTSTIDL ++GE+  S+DRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+AQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPYSQ+A LL   GVD ++ID A
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVAAAT+ +F +AFP+R+++S L+ L+ +    G++  KG 
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 585

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+K  K  P+P +   IE+ R  S +    K   + EK+IVEMI FPVVNE+CRVL E
Sbjct: 586 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 645

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A V+GM FPSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP  +L 
Sbjct: 646 GIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLA 705

Query: 541 ERATKGIPL 549
           ERA +G  L
Sbjct: 706 ERAVQGATL 714


>gi|356521845|ref|XP_003529561.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like [Glycine max]
          Length = 724

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/560 (58%), Positives = 423/560 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L SK +  +E + LGL+D +V+  +L+  +R WALD+   R+PWI SL++T+KL  L 
Sbjct: 164 MILASKPVKGKEAFSLGLVDGLVSPNDLVNTARQWALDMLGHRRPWIASLYKTEKLEPLG 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K APN+     C+DVIE GIV G  +G+ KEA+ F+ LV  DT + 
Sbjct: 224 EAREILKFARAQARKRAPNLQHPLVCIDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR TSKVP VTD GL PR V+KVA+IGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 284 LVHVFFAQRGTSKVPGVTDCGLAPRQVKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GKLT++     + +LKG LDY  F+DVD+VIEAVIE++ L
Sbjct: 344 KFLDAGINRIKANLQSRVKKGKLTKENFEKTISLLKGSLDYESFRDVDLVIEAVIENISL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHCILA+NTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS QVI+D++ + K IKK PVVVGNCTGFAVNR FFPY+Q+  LLV  G DV++ID  
Sbjct: 464 KQTSPQVIVDVLDISKKIKKTPVVVGNCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRI 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT  +F + FP+R+++S L+ LL +  R G+   KG 
Sbjct: 524 ITKFGMPMGPFRLADLVGFGVAIATGTQFIQNFPERTYKSMLIPLLQEDNRAGETTRKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   IE+ R +S +    K   + EK+I+EMI FPVVNE+CRVL+E
Sbjct: 584 YLYDDKRKASPDPELKNYIEKARSISGVSVDPKLAKLQEKDIIEMIFFPVVNEACRVLDE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD ++++GM FP YRGGI+FWAD++G+ Y+Y+ L+KWS+LYG FFKP  +L 
Sbjct: 644 GIAVKAADLDISAIMGMGFPPYRGGIIFWADSLGSKYIYSRLEKWSELYGEFFKPCAYLA 703

Query: 541 ERATKGIPLSAPVSSSSTSR 560
            RA KGIPLSA +   + SR
Sbjct: 704 ARAAKGIPLSASLEQQAKSR 723


>gi|351723429|ref|NP_001234975.1| peroxisomal fatty acid beta-oxidation multifunctional protein
           [Glycine max]
 gi|167962162|dbj|BAG09370.1| peroxisomal fatty acid beta-oxidation multifunctional protein
           [Glycine max]
          Length = 723

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/558 (58%), Positives = 421/558 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L SK +  +E + LGL+D +V+  +L+  +R WALD+   R+PWI SL++T+KL  L 
Sbjct: 164 MILASKPVKGKEAFSLGLVDGLVSPNDLVNTARQWALDMLGHRRPWIASLYKTEKLEPLG 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K APN+     C+DVIE GIV G  +G+ KEA+ F+ LV  DT + 
Sbjct: 224 EAREILKFARAQARKRAPNLQHPLVCIDVIEAGIVAGPRAGLWKEAEAFEGLVRSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQR TSKVP VTD GL PR V+KVA+IGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 284 LVHVFFAQRGTSKVPGVTDCGLAPRQVKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GKLT++     + +LKG LDY  F+DVDMVIEAVIE++ L
Sbjct: 344 KFLDAGINRIKANLQSRVKKGKLTKENFEKTISLLKGSLDYESFRDVDMVIEAVIENISL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHCILA+NTSTIDLN++GEKT +QDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGEKTKTQDRIVGAHFFSPAHVMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TSAQVI+D++ + K IKK PVVVGNCTGFAVNR FFPY+Q+  LLV  G DV++ID  
Sbjct: 464 KQTSAQVIVDVLDISKKIKKTPVVVGNCTGFAVNRMFFPYTQAGLLLVERGADVYQIDRV 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L+DL G+GVA AT  +F + FP+R+++S L+ LL +  R G+   KG 
Sbjct: 524 ITKFGMPMGPFRLMDLVGFGVAIATGMQFIQNFPERTYKSMLISLLQEDKRAGETTHKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y    K  PDP +   IE+ R +S +    K   + EK+I+EMI FPVVNE+CRVL+E
Sbjct: 584 YLYNDKRKASPDPELKNYIEKARSISGVSVDPKLAKLQEKDIIEMIFFPVVNEACRVLDE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD ++++GM FP YRGGI+FWAD++G+ Y+Y+ L+KWS+LYG FFKP   L 
Sbjct: 644 GIAVKAADLDISAIMGMGFPPYRGGIIFWADSLGSKYIYSRLEKWSELYGEFFKPCANLA 703

Query: 541 ERATKGIPLSAPVSSSST 558
            RA KGIPLSA V    +
Sbjct: 704 ARAAKGIPLSASVEQGKS 721


>gi|225431755|ref|XP_002270067.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a [Vitis vinifera]
          Length = 724

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/556 (57%), Positives = 420/556 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SK +   +   LGL+DAVV  ++L+K +R WALDI   R+PW+ SL++TDKL  L 
Sbjct: 165 MMLMSKPVKGVDAHSLGLVDAVVAPDQLVKTARQWALDILECRRPWVHSLYKTDKLEPLG 224

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K APN+     C+DVIE GIV G  +G+ KEA+ F+EL+  D  + 
Sbjct: 225 EAREILKFARTQAQKQAPNLKHPLLCIDVIEAGIVSGPVAGLWKEAEAFQELLHSDICKS 284

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH+FFAQR TSKVP + D+GL PR + KVA++GGGLMGSGIATA +L+N  V+LKEVN 
Sbjct: 285 LVHIFFAQRGTSKVPGIADLGLVPRRINKVAILGGGLMGSGIATALMLSNYPVILKEVNE 344

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +G +TQ+K      +LKGVLDY  FKDVDMVIEAVIE+V L
Sbjct: 345 KFLQAGIGRVRANLQSRVKKGAMTQEKFEKTFSLLKGVLDYESFKDVDMVIEAVIENVSL 404

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CPPHCILA+NTSTIDLN++GEKT S DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 405 KQQIFADLEKFCPPHCILASNTSTIDLNLIGEKTRSHDRIVGAHFFSPAHVMPLLEIVRT 464

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           +RTS QVI+DL+ +GK IKK PVVVGNCTGFAVNR F PY+Q+A LLV  G DV++ID A
Sbjct: 465 QRTSPQVIVDLLDIGKKIKKTPVVVGNCTGFAVNRMFSPYTQAALLLVEHGADVYQIDRA 524

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L+DL G+GVA AT  +F + FP+R+++S L+ ++ +  R G+   KG 
Sbjct: 525 ITKFGMPMGPFRLVDLVGFGVAIATGGQFVQNFPERTYKSMLIPIMQEDKRAGETTRKGF 584

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   +E+ R +S +    K + +++K+IVEMI FPVVNE+CRV  E
Sbjct: 585 YVYDDKRKASPDPELKKYVEKARGISGVAIDPKLMKLSDKDIVEMIFFPVVNEACRVYAE 644

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A V+GM FP YRGGI+FWAD++G+ Y+Y+ L+ WS LYG FFKP  +L 
Sbjct: 645 GIAVKAADLDIAGVMGMGFPPYRGGIMFWADSLGSKYIYSRLEAWSNLYGGFFKPCAYLA 704

Query: 541 ERATKGIPLSAPVSSS 556
           ERA KG PLS+P+  +
Sbjct: 705 ERAAKGAPLSSPLERA 720


>gi|296083347|emb|CBI22983.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  687 bits (1773), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/556 (57%), Positives = 420/556 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SK +   +   LGL+DAVV  ++L+K +R WALDI   R+PW+ SL++TDKL  L 
Sbjct: 206 MMLMSKPVKGVDAHSLGLVDAVVAPDQLVKTARQWALDILECRRPWVHSLYKTDKLEPLG 265

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K APN+     C+DVIE GIV G  +G+ KEA+ F+EL+  D  + 
Sbjct: 266 EAREILKFARTQAQKQAPNLKHPLLCIDVIEAGIVSGPVAGLWKEAEAFQELLHSDICKS 325

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH+FFAQR TSKVP + D+GL PR + KVA++GGGLMGSGIATA +L+N  V+LKEVN 
Sbjct: 326 LVHIFFAQRGTSKVPGIADLGLVPRRINKVAILGGGLMGSGIATALMLSNYPVILKEVNE 385

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +G +TQ+K      +LKGVLDY  FKDVDMVIEAVIE+V L
Sbjct: 386 KFLQAGIGRVRANLQSRVKKGAMTQEKFEKTFSLLKGVLDYESFKDVDMVIEAVIENVSL 445

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CPPHCILA+NTSTIDLN++GEKT S DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 446 KQQIFADLEKFCPPHCILASNTSTIDLNLIGEKTRSHDRIVGAHFFSPAHVMPLLEIVRT 505

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           +RTS QVI+DL+ +GK IKK PVVVGNCTGFAVNR F PY+Q+A LLV  G DV++ID A
Sbjct: 506 QRTSPQVIVDLLDIGKKIKKTPVVVGNCTGFAVNRMFSPYTQAALLLVEHGADVYQIDRA 565

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L+DL G+GVA AT  +F + FP+R+++S L+ ++ +  R G+   KG 
Sbjct: 566 ITKFGMPMGPFRLVDLVGFGVAIATGGQFVQNFPERTYKSMLIPIMQEDKRAGETTRKGF 625

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   +E+ R +S +    K + +++K+IVEMI FPVVNE+CRV  E
Sbjct: 626 YVYDDKRKASPDPELKKYVEKARGISGVAIDPKLMKLSDKDIVEMIFFPVVNEACRVYAE 685

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A V+GM FP YRGGI+FWAD++G+ Y+Y+ L+ WS LYG FFKP  +L 
Sbjct: 686 GIAVKAADLDIAGVMGMGFPPYRGGIMFWADSLGSKYIYSRLEAWSNLYGGFFKPCAYLA 745

Query: 541 ERATKGIPLSAPVSSS 556
           ERA KG PLS+P+  +
Sbjct: 746 ERAAKGAPLSSPLERA 761


>gi|115436430|ref|NP_001042973.1| Os01g0348600 [Oryza sativa Japonica Group]
 gi|15290204|dbj|BAB63893.1| putative tetrafunctional protein of glyoxysomal fatty acid
           beta-oxidation [Oryza sativa Japonica Group]
 gi|21104813|dbj|BAB93398.1| putative tetrafunctional protein of glyoxysomal fatty acid
           beta-oxidation [Oryza sativa Japonica Group]
 gi|113532504|dbj|BAF04887.1| Os01g0348600 [Oryza sativa Japonica Group]
 gi|125570288|gb|EAZ11803.1| hypothetical protein OsJ_01677 [Oryza sativa Japonica Group]
 gi|215713473|dbj|BAG94610.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218188166|gb|EEC70593.1| hypothetical protein OsI_01815 [Oryza sativa Indica Group]
          Length = 727

 Score =  687 bits (1772), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/563 (57%), Positives = 433/563 (76%), Gaps = 3/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK I   E  +LGL+D++V++++L+  +R WALDI   ++PWI+SL++TDKL  L 
Sbjct: 168 MMLLSKPIKGAEAHQLGLVDSLVSADDLVNTARRWALDICELKRPWIKSLYKTDKLEPLG 227

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA++ A N+     C+DVIEEGIV G  +G+ KEA  F+ L+  DT + 
Sbjct: 228 EAREILKFARAQARRQAANLEHPLVCIDVIEEGIVSGPRAGLWKEANAFQGLLFADTCKN 287

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSKVP  TD+GL PR V KVA++GGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 288 LVHVFFSQRATSKVPGATDLGLMPRKVTKVAILGGGLMGSGIATAMILSNYPVILKEVNE 347

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GK+T+++   A+ ++ GVLDY  FKDVD+VIEAVIE+V L
Sbjct: 348 KFLNAGIDRIKANLQSRVRKGKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKL 407

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CP HC+LATNTSTIDLN++GEKT S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 408 KQQIFSDLEKYCPSHCVLATNTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVMPLLEIVRT 467

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L V LG+DV++ID A
Sbjct: 468 QHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDLGMDVYKIDRA 527

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+L DL G+GVAAAT  ++ + FP+R ++S L+ L+++  R G+A+ KG 
Sbjct: 528 CTKFGMPMGPFRLADLVGFGVAAATGMQYLENFPERVYKSMLIPLMMEDKRTGEASRKGF 587

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP ++  IE+ R ++ + P  + + ++EK+IVEM+ FPV+NE+CRVL+E
Sbjct: 588 YKYEDKRKATPDPEIMKYIEKSRSMAGVTPDTELMKLSEKDIVEMVFFPVINEACRVLDE 647

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+ASDLD AS+ GM FP YRGGI+FWAD++GA Y++  L+ W++ Y + FKP  +L 
Sbjct: 648 GIAVKASDLDIASIFGMGFPPYRGGIMFWADSIGAKYIHDKLEVWAKRYSDIFKPCSYLA 707

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA  G+PLSAP   +   +ARL
Sbjct: 708 ERAANGVPLSAP---AKQVKARL 727


>gi|356564184|ref|XP_003550336.1| PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional
           protein MFP2-like [Glycine max]
          Length = 722

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/558 (57%), Positives = 423/558 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  +E + LGL+D +++ ++L+  +  WALDI  RR+PWI SL++TDKL  L 
Sbjct: 163 MMLTSKPVKGKEAFSLGLVDGLMSPDDLVNTACQWALDIMGRRRPWIASLYKTDKLEPLG 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR Q +K APN+     C+DVIE G+V G  +G+ KE +  + L+  DTS+ 
Sbjct: 223 EAREILKFARAQVQKRAPNLQHPLVCIDVIEAGVVAGPRAGLWKEVEASEGLIKSDTSKS 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFF+QR TSKVP VTD GL PR V+KVA+IGGGLMGSGIATA IL++  ++LKEVN 
Sbjct: 283 LIHVFFSQRGTSKVPGVTDCGLVPRHVKKVAIIGGGLMGSGIATALILSSYPIILKEVNE 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GKLTQ+   N + +LKG LDY  FKDVDMVIEAV+E+V L
Sbjct: 343 KFLEAGINRIKANLQSRVKKGKLTQENFENTVSLLKGTLDYESFKDVDMVIEAVVENVSL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CPPHCILA+NTSTIDLN++GE+T SQDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 403 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTKSQDRIVGAHFFSPAHVMPLLEIVRT 462

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TSAQV++D++ + K IKK PVVVGNCTGFAVNR FFPY+Q+   LV  G DV++ID  
Sbjct: 463 KQTSAQVVVDVLDISKKIKKTPVVVGNCTGFAVNRMFFPYTQAGLFLVEHGADVYQIDRV 522

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L+DL G+GVA AT  +F + FP+R+++S L+ LL +  R G+   KG 
Sbjct: 523 ITKFGMPMGPFRLVDLVGFGVAIATGMQFIQNFPERTYKSMLIPLLQEDKRAGETTRKGF 582

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   KP PDP +   IE+ R  + +    K + + EK+I+EM  FPVVNE+CRVL+E
Sbjct: 583 YLYDDKCKPSPDPELKNYIEKARSFTGVSVDPKLVKLQEKDIIEMTFFPVVNEACRVLDE 642

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+ SDLD ++V+GM FP YRGGI+FWAD++G+ Y+Y+ L+KWS+LYG FFKP  +L 
Sbjct: 643 GIAVKGSDLDISAVMGMGFPPYRGGILFWADSLGSKYIYSKLEKWSELYGEFFKPCAYLA 702

Query: 541 ERATKGIPLSAPVSSSST 558
            RA KGIPLSA V  +++
Sbjct: 703 ARAAKGIPLSASVEQANS 720


>gi|224033651|gb|ACN35901.1| unknown [Zea mays]
 gi|413948034|gb|AFW80683.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Zea mays]
          Length = 723

 Score =  686 bits (1770), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/552 (58%), Positives = 425/552 (76%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK I   E  +LGL+DA+V+  +L+  +R WALDI   R+PWI+SL++TDKL  L 
Sbjct: 164 MMLLSKPIKGGEAHQLGLVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLG 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K A N+     C+DVIEEGIV G  +G+ KEA  F+EL+  DT + 
Sbjct: 224 EAREILKFARAQAQKQAANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSK+P  TD+GL PR + KVA++GGGLMGSGIATA +L+N  V+LKEVN 
Sbjct: 284 LVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNE 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GK+T+++   A+ ++ GVLDY  FKDVD+VIEAVIE+V L
Sbjct: 344 KFLTAGINRIQANLQSRVKKGKMTEERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CP HCILATNTSTIDLN++GEKT +QDRI GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA   V LG+DV++ID A
Sbjct: 464 QHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRA 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+L DL G+GVA AT  ++ + FP+R ++S L+ L+++  R G+A  KG 
Sbjct: 524 CTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLLPLMMEGNRAGEATQKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP ++  IE+ R ++ + P  + + ++EK+IVEM+ FPV+NE+CRVL+E
Sbjct: 584 YKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVINEACRVLDE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+ASDLD AS+ GM FP YRGG++ WAD++GA Y++  L++W++ YG FFKP  +L 
Sbjct: 644 GIAVKASDLDIASIFGMGFPPYRGGVMHWADSIGAKYIHGKLEEWTKRYGGFFKPCSYLA 703

Query: 541 ERATKGIPLSAP 552
           ERA KGIPLSAP
Sbjct: 704 ERAAKGIPLSAP 715


>gi|224130412|ref|XP_002328602.1| predicted protein [Populus trichocarpa]
 gi|222838584|gb|EEE76949.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/558 (58%), Positives = 419/558 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE   LGL+DAVV+  EL+  +R WALDI   R+PWI SL++T+KL SL 
Sbjct: 167 MMLTSKPVKGEEAHALGLVDAVVSPNELVSTARQWALDIFECRRPWIASLYKTEKLDSLG 226

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+ K AR QA+K APN+     C++V+E GIV G  +G+ KE + F+ELV  D S+ 
Sbjct: 227 EAREIFKFARAQAQKRAPNLLHPIVCINVVEHGIVSGPRAGLYKEFESFQELVRSDISKS 286

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH+FFA   T+KVP +TD+G  PR V+KVAV+GGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 287 LVHIFFALHGTTKVPGITDLGFVPRLVKKVAVLGGGLMGSGIATALILSNYPVILKEVND 346

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +GK+TQ+K    + +LKG LDY  FKDVDMVIEAVIE+V L
Sbjct: 347 QFLQAGIGRVRANLQSRVKKGKMTQEKFEKTMSLLKGSLDYESFKDVDMVIEAVIENVSL 406

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHCILA+NTSTIDLN++G++T SQDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 407 KQQIFSDLEKYCPPHCILASNTSTIDLNLIGKQTKSQDRIIGAHFFSPAHVMPLLEIVRT 466

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS QVI+DL+ VGK I+K PVVVGNCTGFAVNR FFPY+Q+A  LV  GVD+++ID  
Sbjct: 467 KQTSPQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAIFLVEHGVDLYQIDRV 526

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT  +F + FP+R+++S L+ L+ +  R G+   KG 
Sbjct: 527 ISKFGMPMGPFRLADLVGFGVAIATGMQFVENFPERTYKSMLLPLMQEDKRGGETTCKGF 586

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K KPDP +   IE+ R +S +    K   + EK+IVEMI FPVVNE+CRV  E
Sbjct: 587 YLYDDRRKAKPDPELRKYIEKARSISGVAVDPKLAKLPEKDIVEMIFFPVVNEACRVFAE 646

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD AS++GM FP YRGGI+FWAD+ G+ Y+Y+ L++WS+ YG FF+P  FL 
Sbjct: 647 GIAVKAADLDIASLMGMGFPPYRGGIMFWADSFGSKYIYSRLEEWSKTYGEFFEPCAFLA 706

Query: 541 ERATKGIPLSAPVSSSST 558
           ER  KG PLS+PV  + +
Sbjct: 707 ERGAKGAPLSSPVEQAKS 724


>gi|226506006|ref|NP_001152306.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Zea mays]
 gi|195654913|gb|ACG46924.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Zea mays]
          Length = 723

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/552 (58%), Positives = 424/552 (76%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK I   E  +LGL+DA+V+  +L+  +R WALDI   R+PWI+SL++TDKL  L 
Sbjct: 164 MMLLSKPIKGGEAHQLGLVDALVSPNDLVNTARQWALDIYECRRPWIKSLYKTDKLEPLG 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K A N+     C+DVIEEGIV G  +G+ KEA  F+EL+  DT + 
Sbjct: 224 EAREILKFARAQAQKQAANLHHPLVCIDVIEEGIVAGPRAGLWKEATSFQELLFSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSK+P  TD+GL PR + KVA++GGGLMGSGIATA +L+N  V+LKEVN 
Sbjct: 284 LVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGIATAMVLSNYPVLLKEVNE 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GK+T ++   A+ ++ GVLDY  FKDVD+VIEAVIE+V L
Sbjct: 344 KFLTAGINRIQANLQSRVRKGKMTDERYEKAMSLVTGVLDYERFKDVDLVIEAVIENVKL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CP HCILATNTSTIDLN++GEKT +QDRI GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAGAHFFSPAHVMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA   V LG+DV++ID A
Sbjct: 464 QHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLGMDVYKIDRA 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+L DL G+GVA AT  ++ + FP+R ++S L+ L+++  R G+A  KG 
Sbjct: 524 CTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLLPLMMEDNRAGEATQKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP ++  IE+ R ++ + P  + + ++EK+IVEM+ FPV+NE+CRVL+E
Sbjct: 584 YKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVINEACRVLDE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+ASDLD AS+ GM FP YRGG++ WAD++GA Y++  L++W++ YG FFKP  +L 
Sbjct: 644 GIAVKASDLDIASIFGMGFPPYRGGVMHWADSIGAKYIHGKLEEWTKRYGGFFKPCSYLA 703

Query: 541 ERATKGIPLSAP 552
           ERA KGIPLSAP
Sbjct: 704 ERAAKGIPLSAP 715


>gi|15231317|ref|NP_187342.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
           thaliana]
 gi|75267758|sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional
           protein MFP2; Short=AtMPF2; Includes: RecName:
           Full=Enoyl-CoA hydratase/3-2-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|295982056|pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
 gi|6728993|gb|AAF26990.1|AC016827_1 fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
 gi|4337027|gb|AAD18042.1| MFP2 [Arabidopsis thaliana]
 gi|17065090|gb|AAL32699.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
 gi|332640947|gb|AEE74468.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis
           thaliana]
          Length = 725

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/558 (57%), Positives = 419/558 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L SK + +EEG  LGLIDAVV   EL+  +R WALDI  RRKPW+ S+ +TDKL  L 
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLG 225

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+L  A+ Q  K APNM     CLD IE GIV G  +G+ KEA+V  ++V LDT++G
Sbjct: 226 EAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKG 285

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFF+QR T+KVP VTD GL PR ++KVA+IGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 286 LIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++  V +G ++Q+K    + +LKG LDY  F+DVDMVIEAVIE++ L
Sbjct: 346 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CP HCILA+NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRT 465

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TSAQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+Q+A  LV  G D + ID A
Sbjct: 466 NHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRA 525

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT+ +F + F +R+++S ++ L+ +  R G+A  KG 
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGF 585

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K KPDP +   IE+ R +S +    K  +++EK+I+EM  FPVVNE+CRV  E
Sbjct: 586 YLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAE 645

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+A+DLD A ++GM FP YRGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP  FL 
Sbjct: 646 GIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLA 705

Query: 541 ERATKGIPLSAPVSSSST 558
           ER +KG+ LSAPV  +S+
Sbjct: 706 ERGSKGVLLSAPVKQASS 723


>gi|326499728|dbj|BAJ86175.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 761

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/560 (57%), Positives = 430/560 (76%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MMLLSK I  EE  +LGL+DA+V+  +L+  +R  ALDI   RKPWI+SL++TDKL  L 
Sbjct: 201 MMLLSKPIKGEEAHQLGLVDALVSPNDLVNTARRLALDICELRKPWIKSLYKTDKLEPLG 260

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K A N+     C+DVIEEGIV G  +G+ KEA  F+ L+  DT + 
Sbjct: 261 EAREILKFARAQARKQAANLEHPLICIDVIEEGIVSGPRAGLWKEANAFQGLLFSDTCKS 320

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFF+QRATSKVP  TD+GL PR + KVA++GGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 321 LLHVFFSQRATSKVPGATDLGLMPRKIMKVAILGGGLMGSGIATAMILSNYPVLLKEVNE 380

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GK+T+++   AL +L G L Y +FK+VD+VIEAVIE+V L
Sbjct: 381 KFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLLSGALGYEKFKEVDLVIEAVIENVKL 440

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 441 KQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 500

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L V  G+DV++ID A
Sbjct: 501 QHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGLDVYKIDRA 560

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+L DL G+GVA AT  ++ + FPDR ++S L+ ++++  R G+A+ KG 
Sbjct: 561 CTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPDRVYKSMLIPIMMEDKRAGEASRKGF 620

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP ++  I++ R ++ + P  + + +++K+IVEM+ FPV+NE+CRVL+E
Sbjct: 621 YKYEDKRKATPDPEIMTYIQKSRSMAGVTPDAELMKLSDKDIVEMVFFPVINEACRVLDE 680

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+ASDLD AS+ GM FP YRGG++ W D++GA Y++  L++W++ YG+FF+P  +L 
Sbjct: 681 GIAVKASDLDIASIFGMGFPPYRGGVMLWGDSIGAKYIHEKLQQWAKRYGSFFEPCSYLA 740

Query: 541 ERATKGIPLSAPVSSSSTSR 560
           ERA KGIPLSAP +S   +R
Sbjct: 741 ERAAKGIPLSAPAASQVKAR 760


>gi|171854673|dbj|BAG16526.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
           protein [Capsicum chinense]
          Length = 725

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/550 (58%), Positives = 417/550 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L SK +  EE   LGL+DAVV S +LL  +R WALDI   RKPW+ SLH+TDK+  L 
Sbjct: 166 MILTSKPVKGEEAVNLGLVDAVVPSNQLLGTARKWALDILECRKPWVASLHKTDKIEPLG 225

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+ K AR+Q +K APN+      +DVIEEGIV G  +G+ KEA+ F+ L+  DT + 
Sbjct: 226 EAREIFKFARVQTRKQAPNLQHLLVVIDVIEEGIVSGPLAGLWKEAEAFQALLHSDTCKA 285

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LV+VFFAQRAT+KVP VTD+GLKPR ++KVA++GGGLMGSGIATA + +   V+LKEVN 
Sbjct: 286 LVNVFFAQRATTKVPGVTDLGLKPRRIKKVAILGGGLMGSGIATALLRSGYPVILKEVND 345

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +GK++Q+K    L +LKG LDY  F+DVDMVIEAVIE+V L
Sbjct: 346 KFLQAGLGRVKANLQSSVKKGKMSQEKFEKTLSLLKGALDYEGFRDVDMVIEAVIENVSL 405

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ++F++LEK CP HCILA+NTSTIDLN++GEKT SQDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 406 KQQVFADLEKYCPSHCILASNTSTIDLNLIGEKTKSQDRIIGAHFFSPAHVMPLLEIVRT 465

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS Q+I+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+Q+A LLV  G DVFRID  
Sbjct: 466 QKTSPQIIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAALLLVERGADVFRIDRI 525

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT  +F   FP+R+++S L+ L+ +  R G+   KG 
Sbjct: 526 ITKFGMPMGPFRLCDLVGFGVAIATGGQFVMNFPERTYKSMLIPLMQEDKRAGETTRKGF 585

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   IE+ R +S +    K   +++K+I+EMI FPVVNE+CRVL E
Sbjct: 586 YVYDDRRKASPDPEIKKYIEKAREMSGVTIDHKMAKLSDKDIIEMIFFPVVNEACRVLAE 645

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V++SDLD ++++GM FP YRGGI+FWAD +G+ Y+ + L +WS++YG+FFKP  +L 
Sbjct: 646 GIAVKSSDLDISAIMGMGFPPYRGGIIFWADTLGSKYICSRLDEWSRMYGDFFKPCSYLA 705

Query: 541 ERATKGIPLS 550
           ERA KG PLS
Sbjct: 706 ERAAKGAPLS 715


>gi|357478819|ref|XP_003609695.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Medicago truncatula]
 gi|355510750|gb|AES91892.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Medicago truncatula]
          Length = 724

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/552 (57%), Positives = 417/552 (75%), Gaps = 1/552 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  ++ +  GL+D +V+ ++L+  +R WALDI  RR+PWI SL++T+K+  L 
Sbjct: 164 MMLTSKPVKGKDAFSSGLVDGLVSPDQLVNTARQWALDILDRRRPWIASLYKTEKIEPLG 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K APN+     C+DVIE GIV G  +G+ KEA+ F  LV  DT + 
Sbjct: 224 EAREILKFARAQARKQAPNLKHPLVCIDVIEAGIVSGPRAGLWKEAEAFDALVQSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+FFAQR TSKVP VTD GL PR V+KVA++GGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 284 LIHIFFAQRGTSKVPGVTDRGLVPRPVKKVAILGGGLMGSGIATALILSNYSVILKEVNE 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +G LTQ++   A  ++KG LDY  F+DVDMVIEAVIE+V L
Sbjct: 344 KFLDAGINRIKANLQSRVKKGNLTQERFEKAFSLVKGSLDYDSFRDVDMVIEAVIENVSL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFF-SPAHVMPLLEIVR 299
           KQ+IF++LEK CPPHCIL +NTSTIDL+++GEKT SQDRIIGAHFF  PAHVMPLLEIVR
Sbjct: 404 KQQIFADLEKYCPPHCILGSNTSTIDLDLIGEKTKSQDRIIGAHFFRCPAHVMPLLEIVR 463

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
           T+RTS QVI+DL+ + K IKK PVVVGNCTGFAVNR FFPY+Q+  LLV  G DV++ID 
Sbjct: 464 TKRTSPQVIVDLLDISKKIKKTPVVVGNCTGFAVNRVFFPYTQATLLLVERGADVYQIDK 523

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+  FG+P+GP +L DL G+GVA AT  +F + FP+R+++S L+ LL +  R G+   KG
Sbjct: 524 AVTKFGMPMGPLRLCDLVGFGVAVATGSQFVQNFPERTYKSMLIPLLQEDKRAGETTRKG 583

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y+   K  PDP +   IE+ R +S +      + + EK+I+EMI FPVVNE+CRVL+
Sbjct: 584 FYLYDDRRKASPDPELKKFIEKARSISGVSVDPMLVKLQEKDIIEMIFFPVVNEACRVLD 643

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGIVV+A+DLD A+++GM FP YRGGI+FWAD++G+ Y+Y+ L+KWS+LYG FFKP  +L
Sbjct: 644 EGIVVKAADLDIAAIMGMGFPPYRGGIIFWADSLGSKYIYSRLEKWSELYGPFFKPCAYL 703

Query: 540 EERATKGIPLSA 551
             RA KGIPL A
Sbjct: 704 AARAAKGIPLGA 715


>gi|357158051|ref|XP_003578000.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like [Brachypodium distachyon]
          Length = 723

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/563 (57%), Positives = 431/563 (76%), Gaps = 3/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+LLSK I  EE ++ GL+D++V+  +L+  +R WALDI   R+PWI+SL++TDKL  L 
Sbjct: 164 MILLSKPIKGEEAYQQGLVDSLVSPNDLVNAARRWALDICELRRPWIKSLYKTDKLEPLG 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K A N+     C+DVIEEGIV G  +G+ KEA  F+ L+  DT + 
Sbjct: 224 EAREILKFARAQARKQAANLEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSKVP  TD+GL PR + KVA++GGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 284 LVHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVNE 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GK+T+++   AL ++ G L Y  FK+VD+VIEAVIE+V L
Sbjct: 344 KFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVKL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L V  G+DV++ID A
Sbjct: 464 QHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDRA 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+L DL G+GVA AT  ++ + FP+R ++S L+ L+++  R G+A GKG 
Sbjct: 524 CTKFGMPMGPFRLADLVGFGVAVATGIQYLENFPERVYKSMLIPLMMEDKRAGEATGKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP ++  I++ R ++ + P  + + +++K+IVEM+ FPV+NE+CRVL+E
Sbjct: 584 YKYEGKRKSTPDPDIMTYIQKSRSMAGVTPDPELMKLSDKDIVEMVFFPVINEACRVLDE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI V+ASDLD AS+ GM FP YRGG++ W D++GA Y++  L+ W++ YG+FF+P  +L 
Sbjct: 644 GIAVKASDLDIASIFGMGFPPYRGGVMLWGDSIGAKYIHGKLQGWAKRYGSFFEPCSYLA 703

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
           ERA KGIPLSAPV+     +ARL
Sbjct: 704 ERAAKGIPLSAPVNQ---VKARL 723


>gi|210257071|dbj|BAG80663.1| multifunctional protein [Nicotiana tabacum]
          Length = 668

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/501 (65%), Positives = 401/501 (80%), Gaps = 5/501 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++ SK+ITSEEG +LGLIDA+V+SEELL V+R WALDI   R+P   SL +TDKLG   
Sbjct: 163 MLMSSKTITSEEGKELGLIDAIVSSEELLAVARCWALDIVEGRQPHCNSLEKTDKLGPKD 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E+ E+LK AR + +      P + ACLDVIEEGI+ GG+SGVLKE KVFKELV+ +T++G
Sbjct: 223 ESLEILKSARQRYRA-----PHYSACLDVIEEGIISGGFSGVLKEDKVFKELVLSNTAKG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVF A+RATSKVP VTDIGLKPR + KVAV+GGGLMGSGIATA I++N+ VV+KE+N 
Sbjct: 278 LLHVFLAERATSKVPGVTDIGLKPRRIEKVAVVGGGLMGSGIATALIMSNMNVVVKEINH 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           EYLLK +K++EAN++GLVTRG+L QDK    L +LKG LDY + KDVDMVIEAV E V L
Sbjct: 338 EYLLKAMKSVEANLQGLVTRGQLNQDKMKRTLSLLKGTLDYEDLKDVDMVIEAVNEVVSL 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ IF ++EK C P CI A+NTSTI L+++GE+TSSQDRI+G H FSPAHVM L+EIVRT
Sbjct: 398 KQSIFEDIEKVCSPDCIFASNTSTISLDVIGERTSSQDRILGIHLFSPAHVMTLVEIVRT 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E TS QVI+D++   K +KKVP+VV NCTGFAVNR FFPY Q   LL +LGVD+FR+D  
Sbjct: 458 ENTSPQVIVDVIRFTKTMKKVPIVVKNCTGFAVNRNFFPYMQGPDLLANLGVDIFRVDRV 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+ +GPFQL DL+GYG+  A  KEF  AFPDR+FQSPLV L++++GR GK NGKG 
Sbjct: 518 ITEFGMRLGPFQLQDLSGYGIFLAGVKEFVAAFPDRAFQSPLVQLMVENGREGKKNGKGY 577

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           YTY+KGSKP+ D SV+ ++EE  R +NI PGGKPISVT++EI+EMI FPVVNE+CRV+EE
Sbjct: 578 YTYKKGSKPEADHSVIQVVEESMRFTNIAPGGKPISVTDEEILEMIFFPVVNEACRVIEE 637

Query: 481 GIVVRASDLDDASVLGMSFPS 501
           GIVVRASD+D ASV G  FPS
Sbjct: 638 GIVVRASDIDIASVHGFKFPS 658


>gi|357135448|ref|XP_003569321.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like [Brachypodium distachyon]
          Length = 748

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/563 (54%), Positives = 426/563 (75%), Gaps = 3/563 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SKSI   E  KLGL+DA+V++ EL+  +  WAL+IA  ++PW +SLHRTDKL  L 
Sbjct: 189 MMLMSKSIKGVEAHKLGLVDAIVSANELVNTACSWALEIAEHKRPWFKSLHRTDKLPDLQ 248

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA+E+LK++R++A+K A N+     C+DVIE G++ G  +G++KE    K L    TS+ 
Sbjct: 249 EAKEILKISRVKAQKQAANLQHPLVCIDVIEAGVLSGPRAGLMKEVVSGKMLEQSQTSKS 308

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L HVFFAQRATSK+P VT++GL PR + K A++GGGLMGSGIATA +LNN++V+LKEVN 
Sbjct: 309 LRHVFFAQRATSKIPEVTNLGLTPRRILKAAIVGGGLMGSGIATALVLNNMFVILKEVNE 368

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++  V RG++T+D     L +L GVLDY +F+D D+VIEAVIE + L
Sbjct: 369 KFLDAGINRVKANLQSFVKRGRMTKDDYEKKLSLLSGVLDYEQFRDADVVIEAVIEDILL 428

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFS+LE+ C  +CI+ATNTSTIDL ++G+KTS QDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 429 KQKIFSDLERYCHSNCIIATNTSTIDLQLIGQKTSCQDRIIGAHFFSPAHVMPLLEIVRT 488

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TS+QVI+DL+ + K I+K P+VVGNCTGFAVNR FFPY Q A LLV  G+DV+RID  
Sbjct: 489 QHTSSQVIVDLLDLAKKIRKTPIVVGNCTGFAVNRMFFPYGQVAGLLVDYGLDVYRIDHV 548

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT K++ ++FP+R ++S L D++LK  R G+++G+G 
Sbjct: 549 ITQFGMPMGPFRLADLVGFGVAVATRKQYYQSFPERCYKSMLTDIMLKDKRTGESSGRGY 608

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   +E+ R ++ +    K + +T+ +IVEM+ FPVVNE+CRVL+E
Sbjct: 609 YLYDDKRKASPDPDIQKYVEKSRNMAGVAKDPKVMKLTDSDIVEMVFFPVVNEACRVLDE 668

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI ++ASDLD AS++GM FPSYRGG++FWAD++GA YV+  L+ WS+ YG FF+P  +L 
Sbjct: 669 GIALKASDLDVASIMGMGFPSYRGGVMFWADSLGAEYVFKRLEAWSKDYGEFFRPCEYLA 728

Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
            RA +G  L   ++++  +++RL
Sbjct: 729 ARARQGASL---IATADGAKSRL 748


>gi|449460957|ref|XP_004148210.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
           beta-oxidation multifunctional protein MFP-a-like
           [Cucumis sativus]
          Length = 713

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/553 (58%), Positives = 415/553 (75%), Gaps = 14/553 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I  +E   LGL+DA+V  EEL+  +R WAL+I  RR+PW+ SLHRTDKL SL+
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR++  LAR QAKK  PN+    AC+D +E G+V G  +G+ KEA+ F+ L+  DT + 
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+FFAQR+T+KVP VTD+GL PR ++KVA++GGGLMGSGIATA IL+N  VVLKEVN 
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYPVVLKEVND 345

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +G +T +K   ++ +LKGVL+Y  FKDVDMVIEAVIE+V L
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK CPPHC+LATNTSTIDL ++GE+  S+DRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+AQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPYSQ+A LL   GVD ++ID A
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN-GKANGKG 419
           I  FG+P+GPF+L DL G+GVAAAT+ +F             V  L++  +N G++  KG
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQF-------------VXPLMQEDKNAGESTRKG 572

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y+K  K  P+P +   IE+ R  S +    K   + EK+IVEMI FPVVNE+CRVL 
Sbjct: 573 FYVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLA 632

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI V+A+DLD A V+GM FPSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP  +L
Sbjct: 633 EGIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYL 692

Query: 540 EERATKGIPLSAP 552
            ERA +G  LSAP
Sbjct: 693 AERAVQGATLSAP 705


>gi|168042293|ref|XP_001773623.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675011|gb|EDQ61511.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 732

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/553 (57%), Positives = 422/553 (76%)

Query: 4   LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           LSK I SEEG KLGL+D +V  E+LL ++R WALDIA  ++P + SL RTDKL SL +AR
Sbjct: 176 LSKPIASEEGKKLGLVDEIVAPEDLLTIARRWALDIALGKRPRLSSLQRTDKLESLGDAR 235

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E++K AR Q KKTAPN+     CLD +EEG+V GGY G LKEA++F   V+ D ++GLV+
Sbjct: 236 EIIKFARAQVKKTAPNLTHPLLCLDAVEEGVVAGGYRGALKEAELFAATVVSDNAKGLVN 295

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +FFA RATSKVP + ++GLKPR ++KVAV+GGGLMGSGI TA IL+   V+LKE+N ++L
Sbjct: 296 LFFAIRATSKVPGIVELGLKPRKIKKVAVVGGGLMGSGIVTALILSGYSVLLKEINDKFL 355

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
             G++ I+AN++  V +GK++++K    L ++ GVL Y +FK VD+VIEAVIE++ LKQ 
Sbjct: 356 QAGLERIKANLQSRVKKGKMSREKFETILSLVTGVLTYEDFKSVDVVIEAVIENIDLKQS 415

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           IF +LEK C   CIL+TNTSTIDLN++G KT SQDRIIGAHFFSPAH+MPLLEIVRT++T
Sbjct: 416 IFVDLEKNCRTDCILSTNTSTIDLNVLGAKTRSQDRIIGAHFFSPAHIMPLLEIVRTDKT 475

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S QVI+DLM +GK IKK  V+VGNCTGFAVNR FFPY+ +A +L  LGVD++RID+AI+S
Sbjct: 476 SPQVIVDLMALGKAIKKTTVLVGNCTGFAVNRVFFPYTMAAMMLSDLGVDIYRIDNAIKS 535

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 423
           +G+P+GPF+L DL G+GV  A   +   +F DR + S LV  +L+S R G+ NGKG Y Y
Sbjct: 536 WGMPMGPFRLTDLVGFGVGVAVGTQVVNSFSDRVYISRLVPKMLQSQRLGEQNGKGFYIY 595

Query: 424 EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIV 483
           ++  K +P P +  II+E +  + IM  GKP+ +T+K+IVEM++FPVVNE+CRVL E IV
Sbjct: 596 DEKRKARPAPEIKDIIKESQEEAGIMLDGKPLELTDKDIVEMVMFPVVNEACRVLAEKIV 655

Query: 484 VRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 543
           V+ASDLD ASV GM FP YRGGIV WAD +GA Y+ + L  W++ +G+FFKP  FLEERA
Sbjct: 656 VQASDLDIASVFGMGFPPYRGGIVCWADIIGAKYIASRLNTWTKAHGDFFKPCAFLEERA 715

Query: 544 TKGIPLSAPVSSS 556
           + G+ LS P+ +S
Sbjct: 716 SSGVKLSVPIRNS 728


>gi|115462175|ref|NP_001054687.1| Os05g0155000 [Oryza sativa Japonica Group]
 gi|113578238|dbj|BAF16601.1| Os05g0155000 [Oryza sativa Japonica Group]
          Length = 724

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/560 (54%), Positives = 411/560 (73%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SK I +EE  +L LIDA+V+  +LL  +  WALDI+  R+PW+ +L RTDKL S  
Sbjct: 164 MMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPD 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR Q +K A N+     C+DVIEEGIV G  +G+ KEA  F++LV  DT + 
Sbjct: 224 EAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSKVP +TD+GL PR V KVA++GGGLMGSGIATA +L+N  VVLKEVN 
Sbjct: 284 LVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVND 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V  GK+T++     L +L GV+DY  FKDVD+VIE ++E+V +
Sbjct: 344 KFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKV 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ++F++LE+ CP HC+LATNTSTIDL+++GEKT+SQDRI GAHFFSPAHVMPLLEIVR+
Sbjct: 404 KQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRS 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TS QV++DL+ VGK IKK PVVVGNCTGFAVNR F PY+  A LLV  G+DV++ID  
Sbjct: 464 NHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQV 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+LLDL G+GVA A+  ++ +  P    +S L+ L+ +  R G+A+ KG 
Sbjct: 524 CTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP +   +E+ RR++  +P  + + + +KEIVEM+ FPV+NE+C+VL E
Sbjct: 584 YKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI  +ASDLD AS+ GM FP YRGGIV+WAD++GA  ++  L +W   +G  F+P  +L 
Sbjct: 644 GIANKASDLDIASIFGMGFPPYRGGIVYWADSIGAKRIHARLSEWEMKHGQLFRPCSYLS 703

Query: 541 ERATKGIPLSAPVSSSSTSR 560
           ERA +G+PLS+   +++ +R
Sbjct: 704 ERAAEGVPLSSTAKNNAKAR 723


>gi|222625457|gb|EEE59589.1| hypothetical protein OsJ_11897 [Oryza sativa Japonica Group]
          Length = 710

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 305/560 (54%), Positives = 411/560 (73%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SK I +EE  +L LIDA+V+  +LL  +  WALDI+  R+PW+ +L RTDKL S  
Sbjct: 150 MMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPD 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR Q +K A N+     C+DVIEEGIV G  +G+ KEA  F++LV  DT + 
Sbjct: 210 EAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKS 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSKVP +TD+GL PR V KVA++GGGLMGSGIATA +L+N  VVLKEVN 
Sbjct: 270 LVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVND 329

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V  GK+T++     L +L GV+DY  FKDVD+VIE ++E+V +
Sbjct: 330 KFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKV 389

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ++F++LE+ CP HC+LATNTSTIDL+++GEKT+SQDRI GAHFFSPAHVMPLLEIVR+
Sbjct: 390 KQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRS 449

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TS QV++DL+ VGK IKK PVVVGNCTGFAVNR F PY+  A LLV  G+DV++ID  
Sbjct: 450 NHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQV 509

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+LLDL G+GVA A+  ++ +  P    +S L+ L+ +  R G+A+ KG 
Sbjct: 510 CTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGF 569

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP +   +E+ RR++  +P  + + + +KEIVEM+ FPV+NE+C+VL E
Sbjct: 570 YKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSE 629

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI  +ASDLD AS+ GM FP YRGGIV+WAD++GA  ++  L +W   +G  F+P  +L 
Sbjct: 630 GIANKASDLDIASIFGMGFPPYRGGIVYWADSIGAKRIHARLSEWEMKHGQLFRPCSYLS 689

Query: 541 ERATKGIPLSAPVSSSSTSR 560
           ERA +G+PLS+   +++ +R
Sbjct: 690 ERAAEGVPLSSTAKNNAKAR 709


>gi|218196641|gb|EEC79068.1| hypothetical protein OsI_19644 [Oryza sativa Indica Group]
          Length = 718

 Score =  648 bits (1672), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/551 (53%), Positives = 415/551 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L+SK +   E  K GL+DAVV+++EL+  +  WAL+I   ++PW RSLHRTD+L +L 
Sbjct: 159 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E +++L  AR+QA+K + ++     C+DVIEEGI+ G  +G++KE    K L M   S+ 
Sbjct: 219 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L HVFFAQRATSK+PN++++GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN 
Sbjct: 279 LRHVFFAQRATSKIPNISNLGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++ LV RG++T++   N L +L GVLDY +F++ D+VIEAVIE + L
Sbjct: 339 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIF++LEK C  +CILATNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT
Sbjct: 399 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRT 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            RTS+QV++DL+ V K I+K P+VVGNCTGFAVNR FFP++Q A  LV  G+DV+ ID  
Sbjct: 459 HRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHV 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA A+ K++ +++P+R ++S L+ ++L+  R G+++ KG 
Sbjct: 519 ITKFGMPMGPFRLADLVGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGF 578

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   IE+ R +++I+   K   +T+ EIVEM+LFPVVNE+CR+L+E
Sbjct: 579 YLYDDKRKASPDPEMNKYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDE 638

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+ ++ASDLD AS++G  FPSYRGG++FWAD+ GA Y+Y  LK WS+ +G  F+P  +L 
Sbjct: 639 GVAMKASDLDVASIMGRGFPSYRGGVMFWADSFGAKYIYDRLKDWSKFHGGIFEPYEYLS 698

Query: 541 ERATKGIPLSA 551
            RA +G+ L+A
Sbjct: 699 TRARQGLSLAA 709


>gi|242087635|ref|XP_002439650.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
 gi|241944935|gb|EES18080.1| hypothetical protein SORBIDRAFT_09g017970 [Sorghum bicolor]
          Length = 718

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/553 (55%), Positives = 407/553 (73%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SK+I      +LGL+DAV ++ EL+  +  WAL+I  ++KPW RSLHRTDKL  L+
Sbjct: 159 MMLMSKTIKGMGAQELGLVDAVTSANELVNAACSWALEIVEKKKPWFRSLHRTDKLPDLA 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E ++VLK AR+QAK    N+     C+DVIEEGIV G  +G++KE    K L    TS+ 
Sbjct: 219 EVKDVLKFARVQAKMKGANVQHPIVCIDVIEEGIVSGPRAGLMKETLSGKMLEQSQTSKS 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FFAQRATSK+PN+T++GL  R ++K A+IGGGLMGSGIAT  ILNN  VVLKEVN 
Sbjct: 279 LRHFFFAQRATSKIPNITNMGLTARKIKKAAIIGGGLMGSGIATILILNNFSVVLKEVNE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E+L  GI  I+AN++  V +G+L  +     L +L GVLDY +F+D D+VIEAVIE + L
Sbjct: 339 EFLSTGINRIKANLQSFVKKGQLAIEDYKKKLSLLCGVLDYEQFRDTDVVIEAVIEDMFL 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK C  +CI ATNTSTIDLNI+GEKT+SQDRI+GAHFFSPAHVMPLLEIV T
Sbjct: 399 KQQIFSDLEKYCHHNCIFATNTSTIDLNIIGEKTASQDRIVGAHFFSPAHVMPLLEIVCT 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TS+QVI+DL+ + K I+K P+VVGNCTGFAVNR FFPY+Q+A  LV  G+DV+  D  
Sbjct: 459 HHTSSQVIVDLLDLAKKIQKTPIVVGNCTGFAVNRMFFPYAQAACFLVDHGLDVYHTDHV 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT K++ +++P R ++S ++ +L++  R G+++ KG 
Sbjct: 519 ITQFGMPMGPFRLADLVGFGVAIATRKQYYQSYPGRCYKSMILQILVEDNRTGESSRKGF 578

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K   DP +   IE+ R ++ +M   K + +T+ +IVEMI FPVVNE+CRVL+E
Sbjct: 579 YVYDNKRKASRDPDLGKYIEKSRNMAGVMQDPKLMKLTDNDIVEMIFFPVVNEACRVLDE 638

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI ++ASDLD AS++GM FPSYRGG++FWAD++GA YVY  L  WS+ YG FF+P  +L 
Sbjct: 639 GIALKASDLDVASIMGMGFPSYRGGLMFWADSLGAKYVYDRLDAWSKDYGEFFRPCEYLA 698

Query: 541 ERATKGIPLSAPV 553
            RA +G+ L+A V
Sbjct: 699 VRARQGVSLAAKV 711


>gi|222631293|gb|EEE63425.1| hypothetical protein OsJ_18237 [Oryza sativa Japonica Group]
          Length = 718

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/551 (53%), Positives = 414/551 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L+SK +   E  K GL+DAVV+++EL+  +  WAL+I   ++PW RSLHRTD+L +L 
Sbjct: 159 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E +++L  AR+QA+K + ++     C+DVIEEGI+ G  +G++KE    K L M   S+ 
Sbjct: 219 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L HVFFAQRATSK+PN++ +GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN 
Sbjct: 279 LRHVFFAQRATSKIPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++ LV RG++T++   N L +L GVLDY +F++ D+VIEAVIE + L
Sbjct: 339 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIF++LEK C  +CILATNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT
Sbjct: 399 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRT 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            RTS+QV++DL+ V K I+K P+VVGNCTGFAVNR FFP++Q A  LV  G+DV+ ID  
Sbjct: 459 HRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHV 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA A+ K++ +++P+R ++S L+ ++L+  R G+++ KG 
Sbjct: 519 ITKFGMPMGPFRLADLVGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGF 578

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   IE+ R +++I+   K   +T+ EIVEM+LFPVVNE+CR+L+E
Sbjct: 579 YLYDDKRKASPDPEMNKYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDE 638

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+ ++ASDLD AS++G  FPSYRGG++FWAD+ GA Y+Y  LK WS+ +G  F+P  +L 
Sbjct: 639 GVAMKASDLDVASIMGRGFPSYRGGVMFWADSFGAKYIYDRLKDWSKYHGGIFEPYEYLS 698

Query: 541 ERATKGIPLSA 551
            RA +G+ L+A
Sbjct: 699 TRARQGLSLAA 709


>gi|47777470|gb|AAT38103.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
           protein [Oryza sativa Japonica Group]
          Length = 724

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/551 (53%), Positives = 414/551 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L+SK +   E  K GL+DAVV+++EL+  +  WAL+I   ++PW RSLHRTD+L +L 
Sbjct: 165 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 224

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E +++L  AR+QA+K + ++     C+DVIEEGI+ G  +G++KE    K L M   S+ 
Sbjct: 225 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 284

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L HVFFAQRATSK+PN++ +GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN 
Sbjct: 285 LRHVFFAQRATSKIPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 344

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++ LV RG++T++   N L +L GVLDY +F++ D+VIEAVIE + L
Sbjct: 345 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 404

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIF++LEK C  +CILATNTSTIDL+++G+KTS QDRI GAHFFSPAH MPLLEI+RT
Sbjct: 405 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLLEIIRT 464

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            RTS+QV++DL+ V K I+K P+VVGNCTGFAVNR FFP++Q A  LV  G+DV+ ID  
Sbjct: 465 HRTSSQVVIDLLNVAKQIRKTPIVVGNCTGFAVNRMFFPFTQVAYFLVDYGLDVYHIDHV 524

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA A+ K++ +++P+R ++S L+ ++L+  R G+++ KG 
Sbjct: 525 ITKFGMPMGPFRLADLVGFGVAIASRKQYLQSYPERCYKSMLIQIMLEENRTGESSRKGF 584

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K  PDP +   IE+ R +++I+   K   +T+ EIVEM+LFPVVNE+CR+L+E
Sbjct: 585 YLYDDKRKASPDPEMNKYIEKSRSMASIVQDPKLPKLTDDEIVEMMLFPVVNEACRLLDE 644

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G+ ++ASDLD AS++G  FPSYRGG++FWAD+ GA Y+Y  LK WS+ +G  F+P  +L 
Sbjct: 645 GVAMKASDLDVASIMGRGFPSYRGGVMFWADSFGAKYIYDRLKDWSKYHGGIFEPYEYLS 704

Query: 541 ERATKGIPLSA 551
            RA +G+ L+A
Sbjct: 705 TRARQGLSLAA 715


>gi|413945015|gb|AFW77664.1| hypothetical protein ZEAMMB73_186479 [Zea mays]
          Length = 718

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/553 (54%), Positives = 408/553 (73%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK+I  +   +LGL+DAV ++ +L+  +  WAL+I  ++KPW +SLHRTD+L  L 
Sbjct: 159 MMLTSKTIKGKMAHELGLVDAVTSANKLVNTACSWALEIFEKKKPWFKSLHRTDRLPDLE 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E +++LK AR+QA+  A N+     C+DVI+EGI+ G  +G++KE    K L    TS+ 
Sbjct: 219 EVKDILKFARVQAEMKAANVQHPIVCIDVIKEGIISGPRAGLMKEVLSGKMLEQSQTSKS 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FFAQRATSK+PN+T+IGL  R ++K A++GGGLMGSGIAT  ILNN  VVLKEVN 
Sbjct: 279 LRHFFFAQRATSKIPNITNIGLTARKIKKAAIVGGGLMGSGIATILILNNFNVVLKEVNE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+ N++ LV +G+LT++     L +L G LDY +F+D D+VIEAVIE + L
Sbjct: 339 QFLSAGINRIKVNLQSLVRKGQLTEEDYEKKLSLLCGALDYEQFRDTDVVIEAVIEDMVL 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LEK C  +CI ATNTSTIDLNI+G+KT+SQDRI+GAHFFSPAHVM LLEIV T
Sbjct: 399 KQQIFSDLEKYCHHNCIFATNTSTIDLNIIGQKTASQDRIVGAHFFSPAHVMSLLEIVCT 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TS+QVI+DL+ + K I+K P+VVGNCTGFAVNR FFPY+Q+A  LV  G+DV+ ID  
Sbjct: 459 HHTSSQVIVDLIDLAKKIQKTPIVVGNCTGFAVNRMFFPYAQAASFLVDYGLDVYHIDHV 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT K++ +++P+RS++S L+ +L++  R G+++ KG 
Sbjct: 519 ITQFGMPMGPFRLADLVGFGVAIATRKQYYQSYPERSYKSMLLQILVEDNRTGESSCKGF 578

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   K   DP     IE+ R ++ +M   K + +T+ +IVEMI FPVVNE+CRVL+E
Sbjct: 579 YVYDDKRKASRDPDFGKYIEKSRNMAGVMQDPKLMKLTDNDIVEMIFFPVVNEACRVLDE 638

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI ++ASDLD AS++GM FPSYRGG++FWAD++GA YVY  L  WS+ YG FF+P  +L 
Sbjct: 639 GIALKASDLDVASIMGMGFPSYRGGVMFWADSLGAKYVYDKLDAWSKDYGEFFRPCEYLA 698

Query: 541 ERATKGIPLSAPV 553
            RA +G  L+A V
Sbjct: 699 VRARQGASLAAKV 711


>gi|326494018|dbj|BAJ85471.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 716

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 291/551 (52%), Positives = 413/551 (74%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SKSI   E  K GL+D++V++++L+  +   AL+I   ++PW++SL RTD+L  + 
Sbjct: 159 MMLMSKSIKGVEAHKFGLVDSIVSADKLVSTACSCALEILEHKRPWLKSLLRTDRLTDIM 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA+++LK AR +A K A N+     C+DVIEEGI+ G  + ++KE    K L    TS+ 
Sbjct: 219 EAKKILKFARAEALKQAANLQHPLVCIDVIEEGILFGPRAALMKEVLSGKMLEQSQTSKS 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L HVFFAQRATSK+PN+ ++GL PR + K A++GGGLMGSGIATA IL++I VVLKEVN 
Sbjct: 279 LRHVFFAQRATSKIPNIINLGLTPRRILKAAIVGGGLMGSGIATAFILSDIVVVLKEVNE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +G++ ++  +  L +L GVLDY +F+D D+VIEAVIE + L
Sbjct: 339 KFLNTGINRIKANLQSFVKKGRMAKEDYDKKLSLLSGVLDYEQFRDADVVIEAVIEDISL 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IFS+LE++C  +CI ATNTSTIDL ++G++T+ QDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 399 KQQIFSDLERSCHSNCIFATNTSTIDLQLIGQQTACQDRIVGAHFFSPAHVMPLLEIVRT 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS+QVI+DL+ V K I+K P+VVG+CTGFAVNR FFPY Q+A LLV+ G+DV+ ID  
Sbjct: 459 QQTSSQVIVDLLDVAKKIRKTPIVVGSCTGFAVNRMFFPYGQAAGLLVNYGLDVYHIDHV 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+GVA AT K++ +++P+R ++S L +++LK  R G+++ +G 
Sbjct: 519 IAKFGMPMGPFRLADLVGFGVAVATGKQYYQSYPERCYKSHLTEIMLKENRTGESSRRGF 578

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+   +  PDP +   +E  R ++ +    K + +T+K+IVEM+ FPVVNE+CRVL+E
Sbjct: 579 YLYDDKREASPDPDIKKYVENSRNMAGVAQDPKLLKLTDKDIVEMVFFPVVNEACRVLDE 638

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI ++ASDLD AS++GM FPS+RGG++FWAD++GA YVY  L  WS+ YG FFKP  +L 
Sbjct: 639 GIALKASDLDVASIMGMGFPSFRGGVMFWADSLGAEYVYRRLDAWSKDYGEFFKPCEYLA 698

Query: 541 ERATKGIPLSA 551
            RA+ G  L+A
Sbjct: 699 SRASCGTSLAA 709


>gi|168057325|ref|XP_001780666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667934|gb|EDQ54552.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 726

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 304/558 (54%), Positives = 403/558 (72%), Gaps = 4/558 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK + SEE  +LGL+DAVV  ++L+ V+R +ALDIA+ R+ W RSL   D +G+  
Sbjct: 167 MMLTSKPVMSEEAKQLGLVDAVVPLQQLVPVARKYALDIASGRQAWRRSLSLIDHIGTPE 226

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E+ ++LK AR +A+K   N+P     LD IE+GI+HGG +G LKE +    LV   T++G
Sbjct: 227 ESSKILKQARARAQKAYRNVPHPFVMLDCIEKGILHGGVAGTLKEEEESPMLVASPTAKG 286

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+FFAQR+  K+  VTD GLKP  ++ VAVIGGGLMGSGIATA  LNN+ V+LKEVN 
Sbjct: 287 LIHIFFAQRSAFKIQGVTDSGLKPHKMKSVAVIGGGLMGSGIATALALNNVPVILKEVNQ 346

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E+L  G+K IEANV     R +   +KA   L  +KG LDY++F DVDMVIEAVIES+PL
Sbjct: 347 EFLQAGLKRIEANVN---ARLRSASEKAQKVLSFVKGTLDYADFSDVDMVIEAVIESIPL 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK C   C+LA+NTSTIDL ++G+KT SQDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 404 KQQIFADLEKYCKSTCLLASNTSTIDLGLIGQKTKSQDRIIGAHFFSPAHVMPLLEIVRT 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TS Q I D++ + K IKKVPVVV +C GFAVNR FFPY Q+  LLV LG   +RID+ 
Sbjct: 464 HDTSKQAIQDMLALAKTIKKVPVVVRSCVGFAVNRMFFPYFQAGHLLVHLGTHPYRIDAV 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +++FG+P+GPF+L DL G  +  ATS+ +  AF +R++Q+ L DLLL+  R G+  G G 
Sbjct: 524 VKAFGMPMGPFRLADLTGIQIGQATSRIYKDAFGERTYQTNLNDLLLEDNRYGERTGMGY 583

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+KGS+  +P P +   + + R+ ++++P GK + ++++EIVEMI + VVNE+CRVL+
Sbjct: 584 YNYKKGSRAEQPAPELDGYLTKTRQAASLIPNGKIVDISDEEIVEMIFYGVVNEACRVLD 643

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E +VVR++DLD ASVLGM FP+YRGG+VFW D VG   +Y+ LK WS LYG+F++PS  L
Sbjct: 644 EDVVVRSADLDIASVLGMGFPAYRGGVVFWGDHVGVERIYSKLKHWSTLYGSFYQPSAAL 703

Query: 540 EERATKGIPLSAPVSSSS 557
           E  A    PLS  V   S
Sbjct: 704 ERAAHGKYPLSQIVEKRS 721


>gi|413925843|gb|AFW65775.1| hypothetical protein ZEAMMB73_546088 [Zea mays]
          Length = 407

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 272/407 (66%), Positives = 339/407 (83%), Gaps = 1/407 (0%)

Query: 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217
           MGSGIAT+ +++NI VVLKEVN ++L +G KTI  N+ GLV RG LT+D+ + A+ +LKG
Sbjct: 1   MGSGIATSLLVSNISVVLKEVNPQFLQRGEKTIAGNLEGLVKRGSLTKDRMHKAMALLKG 60

Query: 218 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 277
            LDYS+FKDVDMVIEAVIE +PLKQ IF+++EK CP HCILATNTSTIDLN+VG+KT+SQ
Sbjct: 61  ALDYSDFKDVDMVIEAVIEKIPLKQSIFADIEKICPKHCILATNTSTIDLNVVGKKTNSQ 120

Query: 278 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 337
           DRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+T+GKIIKKVP+VVGNCTGFAVN  F
Sbjct: 121 DRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITIGKIIKKVPIVVGNCTGFAVNLTF 180

Query: 338 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 397
           FPY+Q + LLVSLG+DVFRID  I +FG+P+GPFQL D+AGYGVA A    +  AF +R+
Sbjct: 181 FPYTQGSHLLVSLGIDVFRIDRVISTFGMPMGPFQLQDVAGYGVALAVKDIYADAFGERN 240

Query: 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISV 457
             S LVDL++K GR GK NGKG Y YEKG KPKPDPSV  +IEE R+ +N MPGGKP+++
Sbjct: 241 LDSDLVDLMVKDGRQGKVNGKGYYIYEKGGKPKPDPSVKHVIEEYRKHANTMPGGKPVTL 300

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
           T+++I+EMI FPVVNE+CRV++E +V+RASDLD ASVLGM FP YRGG+VFWAD VGA Y
Sbjct: 301 TDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASVLGMGFPKYRGGLVFWADTVGAPY 360

Query: 518 VYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTSRARL 563
           +++ L KW+++YG FFKPS +LE+RA  G+PLSAP  S   ++R+R+
Sbjct: 361 IHSKLSKWAEIYGPFFKPSSYLEQRAKSGVPLSAPGASQQGSARSRM 407


>gi|413948032|gb|AFW80681.1| hypothetical protein ZEAMMB73_867373 [Zea mays]
          Length = 460

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 270/461 (58%), Positives = 358/461 (77%), Gaps = 3/461 (0%)

Query: 103 LKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGI 162
           ++EA  F+EL+  DT + LVHVFF+QRATSK+P  TD+GL PR + KVA++GGGLMGSGI
Sbjct: 3   MQEATSFQELLFSDTCKSLVHVFFSQRATSKIPGATDLGLMPRKITKVAILGGGLMGSGI 62

Query: 163 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222
           ATA +L+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A+ ++ GVLDY 
Sbjct: 63  ATAMVLSNYPVLLKEVNEKFLTAGINRIQANLQSRVKKGKMTEERYEKAMSLVTGVLDYE 122

Query: 223 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 282
            FKDVD+VIEAVIE+V LKQ+IFS+LEK CP HCILATNTSTIDLN++GEKT +QDRI G
Sbjct: 123 RFKDVDLVIEAVIENVKLKQQIFSDLEKYCPSHCILATNTSTIDLNLIGEKTKAQDRIAG 182

Query: 283 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 342
           AHFFSPAHVMPLLEIVRT+ TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+Q
Sbjct: 183 AHFFSPAHVMPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQ 242

Query: 343 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL 402
           SA   V LG+DV++ID A   FG+P+GPF+L DL G+GVA AT  ++ + FP+R ++S L
Sbjct: 243 SALFYVDLGMDVYKIDRACTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSML 302

Query: 403 VDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           + L+++  R G+A  KG Y YE   K  PDP ++  IE+ R ++ + P  + + ++EK+I
Sbjct: 303 LPLMMEGNRAGEATQKGFYKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDI 362

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           VEM+ FPV+NE+CRVL+EGI V+ASDLD AS+ GM FP YRGG++ WAD++GA Y++  L
Sbjct: 363 VEMVFFPVINEACRVLDEGIAVKASDLDIASIFGMGFPPYRGGVMHWADSIGAKYIHGKL 422

Query: 523 KKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 563
           ++W++ YG FFKP  +L ERA KGIPLSAP   +   +ARL
Sbjct: 423 EEWTKRYGGFFKPCSYLAERAAKGIPLSAP---TKKVQARL 460


>gi|54291849|gb|AAV32217.1| putative fatty acid beta-oxidation multifunctional protein [Oryza
           sativa Japonica Group]
          Length = 668

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 282/504 (55%), Positives = 372/504 (73%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML+SK I +EE  +L LIDA+V+  +LL  +  WALDI+  R+PW+ +L RTDKL S  
Sbjct: 164 MMLMSKPIKAEEAHQLALIDAIVSPNDLLNTACRWALDISESRRPWVHTLSRTDKLESPD 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR Q +K A N+     C+DVIEEGIV G  +G+ KEA  F++LV  DT + 
Sbjct: 224 EAREILKFARAQVQKQAANLRHPLVCIDVIEEGIVSGPQAGLRKEAIAFQDLVFSDTCKS 283

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSKVP +TD+GL PR V KVA++GGGLMGSGIATA +L+N  VVLKEVN 
Sbjct: 284 LVHVFFSQRATSKVPGITDLGLMPRKVSKVAIVGGGLMGSGIATALMLSNYPVVLKEVND 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V  GK+T++     L +L GV+DY  FKDVD+VIE ++E+V +
Sbjct: 344 KFLDAGIDRIKANLQSRVRNGKMTKEIYEKTLSLLTGVVDYERFKDVDLVIEEIVENVKV 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ++F++LE+ CP HC+LATNTSTIDL+++GEKT+SQDRI GAHFFSPAHVMPLLEIVR+
Sbjct: 404 KQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQDRIAGAHFFSPAHVMPLLEIVRS 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             TS QV++DL+ VGK IKK PVVVGNCTGFAVNR F PY+  A LLV  G+DV++ID  
Sbjct: 464 NHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMFSPYTSIALLLVDRGMDVYKIDQV 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF+LLDL G+GVA A+  ++ +  P    +S L+ L+ +  R G+A+ KG 
Sbjct: 524 CTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSVDKSMLIPLMFEDKRTGEASQKGF 583

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE   K  PDP +   +E+ RR++  +P  + + + +KEIVEM+ FPV+NE+C+VL E
Sbjct: 584 YKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKLDDKEIVEMVFFPVINEACQVLSE 643

Query: 481 GIVVRASDLDDASVLGMSFPSYRG 504
           GI  +ASDLD AS+ GM FP Y G
Sbjct: 644 GIANKASDLDIASIFGMGFPPYSG 667


>gi|384245449|gb|EIE18943.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
           protein [Coccomyxa subellipsoidea C-169]
          Length = 732

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 288/574 (50%), Positives = 387/574 (67%), Gaps = 18/574 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML S  I  ++  KLGL+D VV  E+LL  +R WA +IAA  KP   SL+RTDKL SL 
Sbjct: 158 MMLTSAPINDKKAAKLGLVDGVVPKEKLLAAARAWASEIAAGTKPRNFSLYRTDKLESLG 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV-----------F 109
           EA  +L+ AR + +K AP++     CLD I  GI  GG +G LK+A++           F
Sbjct: 218 EALPILEFARAETQKRAPHLTHPLLCLDAIRVGIEEGGLAG-LKQARICTPNFCAESVAF 276

Query: 110 KELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN 169
            +   LDT + LVH+FFAQRAT KV  +TD GLKPR ++K+AV+GGGLMGSGIATA  L 
Sbjct: 277 NKAASLDTHKALVHIFFAQRATKKVKGITDGGLKPRRIKKIAVLGGGLMGSGIATASALA 336

Query: 170 NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDM 229
            I V++KEVN ++L  G+  I++N+   V +GK+TQ+ A+     +KG LDY++F  VDM
Sbjct: 337 GIEVIVKEVNQKFLEGGMARIKSNLASRVKKGKMTQEAADAVFARVKGALDYNDFASVDM 396

Query: 230 VIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA 289
           VIEAVIE V LKQ+IF++LE+ C P  IL++NTSTID++++G KT + +RI+GAHFFSPA
Sbjct: 397 VIEAVIEDVGLKQRIFADLERVCRPDAILSSNTSTIDISLIGAKTRAAERIVGAHFFSPA 456

Query: 290 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS 349
           H+MPLLEIVRT++TS QVILD +  G  IKK PVVVGNCTGFAVNR FFPY+Q+A LLV 
Sbjct: 457 HIMPLLEIVRTDKTSPQVILDTLEYGSAIKKTPVVVGNCTGFAVNRVFFPYTQAACLLVD 516

Query: 350 LGVDVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLK 408
           +G+D ++ID AI   FG+P+GPF+L DL G  +     K F  +FP+R++ + L+  L +
Sbjct: 517 MGLDPYKIDMAIFAGFGMPMGPFRLSDLVGADIGLHVGKNFLDSFPERTYPAHLIVKLNE 576

Query: 409 SGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           + R G+  G G Y Y+   K KPDPS+ PI+E  R+ + +  GGKP  ++ ++I+E I F
Sbjct: 577 AKRLGEKTGSGFYAYDARRKAKPDPSLAPIVEASRKAAGLYKGGKPPPMSPQDIIEFIFF 636

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           PVVNE CRV+ EGIV + +DLD A+VL M FP+YRGG++ WAD +G   V   L  W+  
Sbjct: 637 PVVNEGCRVIAEGIVDKPADLDVATVLSMGFPAYRGGLIKWADLIGPARVAERLNGWAAQ 696

Query: 529 Y-----GNFFKPSRFLEERATKGIPLSAPVSSSS 557
           +       FFKP  +L   A  G  L A V+  S
Sbjct: 697 FEASGLAGFFKPCDYLANAARTGTQLGAGVAPGS 730


>gi|118488579|gb|ABK96102.1| unknown [Populus trichocarpa]
          Length = 335

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 268/321 (83%), Positives = 294/321 (91%)

Query: 229 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 288
           MVIEAVIESVPLKQKIFSE+EK CPPHCILATNTSTIDLN+VGEKTSSQDRIIGAHFFSP
Sbjct: 1   MVIEAVIESVPLKQKIFSEIEKICPPHCILATNTSTIDLNLVGEKTSSQDRIIGAHFFSP 60

Query: 289 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 348
           AH+MPLLEIVRTE+TSAQ ILDLMTVGK IKKVPVVVGNCTGFAVNRAFFPY+QSA +LV
Sbjct: 61  AHIMPLLEIVRTEKTSAQAILDLMTVGKTIKKVPVVVGNCTGFAVNRAFFPYTQSALILV 120

Query: 349 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLK 408
            LGVDVFRID  I SFGLP+GP+QL DL+GYGVA A  KEF  AFPDR+FQSPL+ LL+K
Sbjct: 121 HLGVDVFRIDKLISSFGLPMGPYQLQDLSGYGVALAVEKEFANAFPDRTFQSPLIHLLVK 180

Query: 409 SGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           SGRNGK NGKG Y YEKGSKP+PDPSVLPIIEE RRL+NIMP GKPI++T+KEIVEM+LF
Sbjct: 181 SGRNGKTNGKGYYIYEKGSKPRPDPSVLPIIEESRRLANIMPNGKPINITDKEIVEMVLF 240

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           PVVNE+CRVL+EG+VVRASDLD ASVLGMSFPSYRGGIVFWAD VG  +VY SLKKWSQ 
Sbjct: 241 PVVNEACRVLDEGVVVRASDLDTASVLGMSFPSYRGGIVFWADLVGPKHVYDSLKKWSQR 300

Query: 529 YGNFFKPSRFLEERATKGIPL 549
           +G+F+KPS+FLEERAT GIPL
Sbjct: 301 FGDFYKPSKFLEERATGGIPL 321


>gi|307103971|gb|EFN52227.1| hypothetical protein CHLNCDRAFT_59763 [Chlorella variabilis]
          Length = 723

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 279/563 (49%), Positives = 388/563 (68%), Gaps = 6/563 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML S  I      +LGL D VV   +LL+V++  A DIAA ++  +++L+RTDKL  L 
Sbjct: 159 MMLTSTPIKDRAARELGLADEVVPPGQLLEVAKRVAFDIAAGKRARVQTLYRTDKLEPLG 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA  +L+ AR QA K A ++     CLD I+ GI HGG +G+ KE + F     LDT + 
Sbjct: 219 EALAILQFARSQAAKRARHLMHPLLCLDAIQYGIEHGGRAGLQKEGECFGAAAALDTHKA 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH+FFAQR+T K+  VTD GL+PR +++VAV+GGGLMGSGIATA +L  + V+LKEVN 
Sbjct: 279 LVHIFFAQRSTKKIRGVTDTGLRPRPIKRVAVLGGGLMGSGIATACVLAGVEVLLKEVNQ 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  I++N+   V +G++T+  A  A+  ++G LDYS F  VDMVIEA IE V L
Sbjct: 339 KFLDAGMGRIQSNLASRVKKGRMTEQMAQAAMSRVQGALDYSGFGSVDMVIEAAIEDVGL 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF+ELE++C    ILATNTSTI++ +VG KTS  DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 399 KQEIFAELERSCRKDAILATNTSTINIELVGAKTSCADRILGAHFFSPAHVMPLLEIVRT 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS QVILD + +   IKK PVVVGNCTGFAVNR FFPY+Q+A +LV +G+D +RID  
Sbjct: 459 DQTSKQVILDTLELSTKIKKTPVVVGNCTGFAVNRVFFPYTQAACMLVDMGLDPYRIDKI 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G  +     K F ++F  R + + ++ LL ++ R G+ +G+G 
Sbjct: 519 IAGFGMPMGPFRLSDLVGADIGLHVGKNFLESFSKRCYPARIIQLLNENKRLGEKSGRGF 578

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNI-MPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+   +  PDP + P++++ R+ + +   G  P  + +++IVE I FPVVNE CRV++
Sbjct: 579 YKYDARRRASPDPDLAPLVQQSRKGAGLYQDGAPPPKMNDQDIVEFIFFPVVNEGCRVID 638

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-----NFFK 534
           EGIV + +DLD A V+GM FP++RGG++FWAD VGA+Y+   L  W++ +       FFK
Sbjct: 639 EGIVDKPADLDVAMVMGMGFPAFRGGLIFWADLVGADYICQRLAGWAKQFSGTALQGFFK 698

Query: 535 PSRFLEERATKGIPLSAPVSSSS 557
           PS +LE  A +G  LSA   ++S
Sbjct: 699 PSAYLERCARQGTKLSAGKGAAS 721


>gi|449532298|ref|XP_004173119.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
           beta-oxidation multifunctional protein MFP-a-like,
           partial [Cucumis sativus]
          Length = 459

 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 268/460 (58%), Positives = 353/460 (76%), Gaps = 3/460 (0%)

Query: 104 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 163
           +E + F+ L+  DTS+ L+HVF +QR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 3   QEIEDFQVLLHADTSKSLIHVFLSQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 62

Query: 164 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223
           TA IL+N  V+LKEVN ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  
Sbjct: 63  TALILSNYPVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 122

Query: 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 283
           FKDVDMVIEAVIE++ LKQ+I  +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GA
Sbjct: 123 FKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGA 182

Query: 284 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 343
           HFFSPAHVMPLLE+VR  RT+ QVI+DL+ V K IKK PVVVGNCTGFAVNR FFPY+Q+
Sbjct: 183 HFFSPAHVMPLLEVVRXNRTAPQVIVDLVDVEKRIKKTPVVVGNCTGFAVNRMFFPYTQA 242

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
           A LLV  GVD ++ID AI  FG+P+GPF+L+DL G+GVA AT  +F + FPDR+F+S ++
Sbjct: 243 ALLLVEHGVDPYQIDRAIYKFGMPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMII 302

Query: 404 DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 463
            L+ +  R G+   KG Y Y+K  K KPDP +   IE+ R +S I    K   +++K+I+
Sbjct: 303 PLMQEDKRAGETTQKGFYLYDKNRKSKPDPELKKYIEKARSMSGISVDPKLAKISDKDII 362

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
           EMI FPVVNE+CRVL EGI V+A+DLD A V+GM FP YRGG++FWAD++G+ Y+Y+ L+
Sbjct: 363 EMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMGFPPYRGGVMFWADSLGSKYIYSRLE 422

Query: 524 KWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 563
           +WS+LYG FFKP  +L ERA +G  LS+P   S  +++RL
Sbjct: 423 EWSKLYGGFFKPCAYLAERAAQGSTLSSP---SVVTKSRL 459


>gi|255080968|ref|XP_002504050.1| predicted protein [Micromonas sp. RCC299]
 gi|226519317|gb|ACO65308.1| predicted protein [Micromonas sp. RCC299]
          Length = 720

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/556 (47%), Positives = 365/556 (65%), Gaps = 6/556 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           MML SK + +EE  KLGL+DA+V +++L+  +   A DIA +R P   +   + KL    
Sbjct: 153 MMLKSKPVKAEEALKLGLVDAIVPADQLIAKATQLAKDIADKRIPRKMASFDSAKLPADE 212

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           + A++V   AR QAK+    MP    CLD +E G+  G  +G+  E   F + V     +
Sbjct: 213 AMAKKVFAGARRQAKRVKHLMPHPWLCLDAVETGVTKGSVAGLASEQDAFAKAVSSRACK 272

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           GLVH FFA R+T+ VP VTD+GLKPR  + VAV+GGGLMGSGIATA  L+ + V+LKE+N
Sbjct: 273 GLVHFFFASRSTAAVPGVTDVGLKPRATKCVAVVGGGLMGSGIATACALSGVRVLLKEIN 332

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            ++L  G+  + AN+   V +G++T  KA+    +    L Y +FK+ DMVIEAVIE++ 
Sbjct: 333 QKFLDAGMARVRANLASNVKKGRMTSQKADAIYSLCTPCLTYDKFKEADMVIEAVIENLD 392

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           LKQKIF++LE++C   CIL+TNTSTID+  V  K  + +RI+GAHFFSPAHVM L EI+R
Sbjct: 393 LKQKIFADLERSCRSDCILSTNTSTIDITKVASKMRNPERILGAHFFSPAHVMQLFEIIR 452

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
           T+ T  QV++D + + K IKK PVVVGNCTGFAVNR FFPY+ SA LLV LG+D + ID+
Sbjct: 453 TDATPPQVLVDALGLSKQIKKTPVVVGNCTGFAVNRVFFPYTMSACLLVDLGLDPYAIDN 512

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AIR+FG+P+GPF+L DL G+ V     + F   FP R ++S L+  L+KSGR G+ +GKG
Sbjct: 513 AIRAFGMPMGPFRLGDLVGHDVGVHVGQNFIDDFPLRVYESKLIPGLMKSGRMGEKSGKG 572

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLS-----NIMPGGKPISVTEKEIVEMILFPVVNES 474
            Y Y+      PDP  +  +    R +          G+ +++T  +I EMI FPVVNE+
Sbjct: 573 FYVYDAKRAATPDPEGIAALLHASRAAASGRFKRSTSGELLAMTADDIAEMIFFPVVNEA 632

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
           CR L EG+VVRASDLD AS+LGM FP +RGG+V WAD VGA  +   L++W   YG  ++
Sbjct: 633 CRCLAEGVVVRASDLDVASILGMGFPPFRGGVVHWADQVGAGRIAARLREWCTAYGGIYQ 692

Query: 535 PSRFLEERATKGIPLS 550
           P  +LE+ A +G  L+
Sbjct: 693 PCPYLEDCAVQGRSLA 708


>gi|302792393|ref|XP_002977962.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
 gi|300153983|gb|EFJ20619.1| hypothetical protein SELMODRAFT_176615 [Selaginella moellendorffii]
          Length = 710

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 270/552 (48%), Positives = 372/552 (67%), Gaps = 2/552 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MM+ SK I ++E  + GL+DA+    +L++ +R +A  IA +  P++++L R+DKL  L 
Sbjct: 157 MMMTSKMIKAKEAHEAGLVDAICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLH 216

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA  ++  ARL+AKKT  ++     CL VIE GI  GG  G + E K+  + V    ++ 
Sbjct: 217 EALHIIANARLRAKKTHKHVEYPFICLAVIEHGIHKGGTEGTIFERKMGVQTVDSLPAKA 276

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+F A+R   KVPNV+D  L+ R V+ V VIGGGLMGSGIATA I++N+ V+LKEV+ 
Sbjct: 277 LMHIFLAERTVYKVPNVSDGRLEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDE 336

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L  GI  ++AN++  V++G ++Q +   AL +L G +DY  F+  ++VIEAVIES+PL
Sbjct: 337 ERLQAGINRVQANLKSRVSKGSMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPL 396

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+KIF EL+  C   CILA+NTS+ DLN + +  S +DRIIGAHFFSPAHVM LLEIVRT
Sbjct: 397 KKKIFGELDAICSRDCILASNTSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRT 456

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TS Q I DL+ + K I KVPVVV N  GFAVNR FFPY + A  LV LGV  +RID+ 
Sbjct: 457 DSTSNQSICDLLALSKKIGKVPVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAV 516

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I+ FG+PIGPF+L DLAG  + A  +  F K F DR + S +  L+ K+ R G+A GKG 
Sbjct: 517 IKDFGMPIGPFRLGDLAGLQIGALVADTFKKEFGDRLYPSYMGTLMAKANRTGEATGKGY 576

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG-KPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y    +  P P +  I+EE R+L+ +   G     +T+K+IVEMI FP+VNE+CRV++
Sbjct: 577 YNYHGTRQEHPAPELDEILEESRKLAGLNARGLTAEGITDKDIVEMIFFPIVNEACRVID 636

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E IV+RASDLD ASVLGM FP++RGGI FW   VG +Y+   L++W   YG+ F+P+  L
Sbjct: 637 EKIVIRASDLDVASVLGMGFPAFRGGIAFWGHTVGLHYILVRLQQWHSHYGSIFRPTSSL 696

Query: 540 EE-RATKGIPLS 550
            +  ATK + L+
Sbjct: 697 HKLAATKSMMLA 708


>gi|302766729|ref|XP_002966785.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
 gi|300166205|gb|EFJ32812.1| hypothetical protein SELMODRAFT_439712 [Selaginella moellendorffii]
          Length = 732

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/552 (48%), Positives = 373/552 (67%), Gaps = 2/552 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MM+ SK I ++E  + GL+DA+    +L++ +R +A  IA +  P++++L R+DKL  L 
Sbjct: 179 MMMTSKMIKAKEAHEAGLVDAICDYPQLIQFARNYAKGIANKTHPFLKTLERSDKLEPLH 238

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +A  ++  ARL+AKKT  ++     CL VIE GI  GG  G + E K+  + V    ++ 
Sbjct: 239 KALHIIANARLRAKKTHKHVEYPFICLAVIEHGIHKGGIEGTIFERKMGVQTVDSLPAKA 298

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H+F A+R   KVPNV+D  L+ R V+ V VIGGGLMGSGIATA I++N+ V+LKEV+ 
Sbjct: 299 LMHIFLAERTVYKVPNVSDGRLEARPVKTVGVIGGGLMGSGIATALIVHNVRVLLKEVDE 358

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L  GI  ++AN++  V++G ++Q +   AL +L G +DY  F+  ++VIEAVIES+PL
Sbjct: 359 ERLQAGINRVQANLKSRVSKGSMSQAEFQRALGLLVGTVDYKGFESANLVIEAVIESIPL 418

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+KIF EL+  C   CILA+NTS+ DLN + +  S +DRIIGAHFFSPAHVM LLEIVRT
Sbjct: 419 KKKIFGELDAICSRDCILASNTSSCDLNEITDGVSFRDRIIGAHFFSPAHVMRLLEIVRT 478

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TS Q I DL+ + K I KVPVVV N  GFAVNR FFPY + A  LV LGV  +RID+ 
Sbjct: 479 DSTSHQSICDLLALSKKIGKVPVVVQNAVGFAVNRVFFPYHRIAAFLVDLGVHPYRIDAV 538

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I+ FG+PIGPF+L DLAG  + A  +  F+K F DR + S +  L+ K+ R G+A GKG 
Sbjct: 539 IKDFGMPIGPFRLGDLAGLQIGALVADTFEKEFGDRLYPSYMGTLMAKANRTGEATGKGY 598

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGG-KPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y    +  P P +  I+EE R+L+ +   G     +T+K+IVEMI FP+VNE+CRV++
Sbjct: 599 YNYHGTRQEHPAPELDEILEESRKLAGLNARGLTAEGITDKDIVEMIFFPIVNEACRVID 658

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E IV+RASDLD ASVLGM FP++RGGI FW   VG +Y+   L++W   YG+ F+P+  L
Sbjct: 659 EKIVIRASDLDVASVLGMGFPAFRGGIAFWGHTVGLHYILVRLQQWHSHYGSIFRPTSSL 718

Query: 540 EE-RATKGIPLS 550
            +  ATK + L+
Sbjct: 719 HKLAATKSMMLA 730


>gi|255551799|ref|XP_002516945.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
 gi|223544033|gb|EEF45559.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
          Length = 541

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 255/415 (61%), Positives = 322/415 (77%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE   LGL+DA+V+  EL+  +R WALD+   RKPW+ SL++T+KL SL 
Sbjct: 24  MMLTSKPVKGEEAHALGLVDALVSPNELVTTARRWALDMLEGRKPWVASLYKTEKLDSLG 83

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+ K AR QA+K APN+     C+DV+EEGIV G  +G+ KEA+ F+ LV  +T + 
Sbjct: 84  EAREIFKFARAQARKQAPNLKHPLVCIDVVEEGIVSGPRAGIWKEAEEFQVLVKSNTCKS 143

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH+FFAQR T+KVP +TD GL PR V KVAV+GGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 144 LVHIFFAQRGTTKVPGITDKGLIPRRVNKVAVLGGGLMGSGIATALILSNYPVILKEVNQ 203

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  + AN++  V +GK++Q+K    L +LKGVLDY  FKDVDMVIEAVIE+V L
Sbjct: 204 QFLDAGINRVRANLQSRVKKGKMSQEKFEKTLSLLKGVLDYESFKDVDMVIEAVIENVSL 263

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CPPHCILA+NTSTIDLN++G+KT SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 264 KQQIFADLEKYCPPHCILASNTSTIDLNLIGQKTRSQDRIIGAHFFSPAHIMPLLEIVRT 323

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +TSAQ I+DL+ VGK I+K PVVVGNCTGFAVNR FFPY+Q+A LLV  G D ++ID A
Sbjct: 324 NQTSAQAIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAILLVEHGTDPYQIDRA 383

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
           I  FG+P+GPF+L DL G+GVA AT  +F + FP+R+++S L+ LL +  R G A
Sbjct: 384 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMLIPLLQEDKRAGIA 438



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 63/84 (75%), Gaps = 3/84 (3%)

Query: 466 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 525
           +L P++ E  R    GI V+A+DLD ASV+GM FP YRGGI+FWAD++G+ Y+Y+ L++W
Sbjct: 424 MLIPLLQEDKRA---GIAVKAADLDIASVMGMGFPPYRGGILFWADSLGSKYIYSRLEEW 480

Query: 526 SQLYGNFFKPSRFLEERATKGIPL 549
           +++YG FFKP  FL ERA KG  L
Sbjct: 481 TKIYGEFFKPCDFLAERAAKGASL 504


>gi|302834984|ref|XP_002949054.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
           nagariensis]
 gi|300265799|gb|EFJ49989.1| hypothetical protein VOLCADRAFT_74021 [Volvox carteri f.
           nagariensis]
          Length = 732

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 281/569 (49%), Positives = 384/569 (67%), Gaps = 12/569 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML S  I +E G KLGL+DA+  +++LL  ++  ALDIA  +KP + SL RTDKL  L 
Sbjct: 162 MMLTSTPIKAEAGLKLGLVDALAPADQLLAAAKSLALDIAEGKKPRMYSLTRTDKLPPLG 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA  VL +AR +A K A  +   Q CL+ I+ GI +GG +G+  E   F E   LDT + 
Sbjct: 222 EALAVLDMARAEASKRARGLRHPQLCLNAIQAGIENGGAAGLAAEGAAFAEAASLDTHKA 281

Query: 121 LVHVFFAQRATSKVPNVTDI-GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           LVH+FFAQR+T KV  VTD+ GLKPR +R VAV+GGGLMGSGIATA +L  + V+LKEVN
Sbjct: 282 LVHIFFAQRSTKKVKGVTDVPGLKPRPIRCVAVLGGGLMGSGIATALVLAGVDVILKEVN 341

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
             +L  G+  I++N++  V +G ++ D A  AL  +KG LDY++F   DMVIEAVIE + 
Sbjct: 342 QNFLDGGMGRIKSNLQSRVKKGAMSADAATAALARVKGALDYNDFGGADMVIEAVIEDIG 401

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEK-----TSSQDRIIGAHFFSPAHVMPL 294
           LKQ+IF++LE+ C P  IL+TNTSTID+++VG K       S  R++GAHFFSPAHVMPL
Sbjct: 402 LKQRIFADLERVCRPDAILSTNTSTIDIDLVGAKMEDGGAKSASRLLGAHFFSPAHVMPL 461

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           LEIVRT RT AQ +LD + +   IKK PVVVGNCTGFAVNR FFPY+ SA LL  LG++ 
Sbjct: 462 LEIVRTSRTGAQALLDTLALSTRIKKTPVVVGNCTGFAVNRVFFPYTMSAVLLADLGMNP 521

Query: 355 FRIDSAIRS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
           +RID+ +   FG+P+GPF+L DL G  +       F  +FP+R + S L+ LL ++ R G
Sbjct: 522 YRIDATVAGKFGMPMGPFRLNDLVGSDIGLHVGANFVTSFPERVYVSRLIPLLNEAKRLG 581

Query: 414 KANGKGLYTYE-KGSKPKPDPSVLPIIEECRRLSNIM-PGGKPISVTEKEIVEMILFPVV 471
           +  GKG Y ++ K  K  PDP + P+++E R+ + ++  G KP ++++ +I++ I FPVV
Sbjct: 582 EKTGKGFYKFDAKTRKASPDPELAPLLDESRKAAALVKEGAKPPALSDADILDFIFFPVV 641

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL--- 528
           NE CRV+ EGIV + +DLD ASV+ M FP+ RGG++FWAD VGA  +   L++++ L   
Sbjct: 642 NEGCRVVAEGIVDKPADLDVASVMAMGFPAVRGGLIFWADLVGAKRIVARLRQFAALVPQ 701

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSSSS 557
           +  FF P  +L + A  G  LSA V + S
Sbjct: 702 HAGFFAPCEYLVQAAESGRKLSAGVPAPS 730


>gi|145345062|ref|XP_001417042.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577268|gb|ABO95335.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 722

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/564 (47%), Positives = 368/564 (65%), Gaps = 4/564 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SKSI +EE  KLGL+D +     ++  +   A  IA+       S++R DKL    
Sbjct: 158 MMLKSKSIKAEEALKLGLVDKIADPSRIVAEASALAKAIASGSVKRELSMYRKDKLPDPK 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
               +LK A  +AK+    MP    C+D I  G+  G   G+ +EA+ FK+ V    ++G
Sbjct: 218 STEMILKEASKKAKRVQSVMPHVALCVDAISVGLAQGPEEGLKREAENFKKAVSSPAAKG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQRAT+ VP +TD+GLKPR ++ V V+GGGLMGSGIATA +L  I VVLKE+  
Sbjct: 278 LVHFFFAQRATNVVPGITDVGLKPRPMKSVGVVGGGLMGSGIATACLLAGIQVVLKEIKQ 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E+L  G+  I++N+  +V +G++T+DKA   + ++K  L   +F+  DMVIEAVIE++PL
Sbjct: 338 EFLDAGVGRIQSNLTSMVRKGRMTEDKARQLMSLVKPTLTDQDFRQCDMVIEAVIENLPL 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIF ELE+ C P CIL+TNTSTID+  +  K  + +RI+GAHFFSPAHVM L EI+RT
Sbjct: 398 KQKIFCELERICKPDCILSTNTSTIDITKIAAKMKNPERIVGAHFFSPAHVMQLFEIIRT 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T AQ+++D + + K IKK PVVVGNCTGFAVNR FFPY+ SA +LV +G D + ID A
Sbjct: 458 DATPAQILVDTLGLSKQIKKTPVVVGNCTGFAVNRIFFPYTMSATVLVDIGCDPYAIDRA 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG+P+GPF+L DL G+ V     + F   FPDR ++SPL+  LL + R G+ +G G 
Sbjct: 518 IMMFGMPMGPFRLGDLVGHDVGVHVGQNFIDDFPDRVYRSPLIPSLLANKRLGEKSGAGF 577

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMP-GGKPI--SVTEKEIVEMILFPVVNESCRV 477
           Y Y+   +  PD   + ++    R  + +P  G PI   ++ +EI EMI FPVVNE+CRV
Sbjct: 578 YKYDNKRRATPDSEGVEMLIAASRAQSKLPLDGSPIPAGLSPQEIAEMIFFPVVNEACRV 637

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           L EGIVV+A D+D A++LGM FP++RGG+V W D+VG   +   L+ WS  YG  ++P  
Sbjct: 638 LSEGIVVKAGDIDTAAILGMGFPAFRGGVVHWGDSVGPAVIAAKLRAWSTKYGGLYQPCP 697

Query: 538 FLEERATKGIPLS-APVSSSSTSR 560
           +LE  A +G  L+  P+ +   SR
Sbjct: 698 YLENCAIQGRTLAQGPLDTKIKSR 721


>gi|303271069|ref|XP_003054896.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462870|gb|EEH60148.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 712

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/569 (46%), Positives = 361/569 (63%), Gaps = 26/569 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK I +EE  KLGL+DA+   + L + +   ALDIA +R                +
Sbjct: 160 MMLKSKPIKAEEALKLGLVDAIAPRDALTQTASKLALDIAEKR----------------A 203

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EA+++  +AR  AK+    MP    C+D IE GI  G   G++ E   F + V     +G
Sbjct: 204 EAKKIFAVARRGAKRVQKLMPHPMLCIDAIEAGINKGASEGLIVEQDAFAKAVSSAACKG 263

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA R T+ VP VTD+GL PR ++ V V+GGGLMGSGIATA ++N + VVLKE+N 
Sbjct: 264 LVHFFFASRGTAAVPGVTDVGLAPRVMKCVGVVGGGLMGSGIATACVMNGVSVVLKEINQ 323

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN+   V +G+LTQ KA+         L Y  F  VDM IEAVIE++ L
Sbjct: 324 KFLDAGMSRVKANLASAVKKGRLTQQKADAMYANCHPTLSYGAFSKVDMAIEAVIENLGL 383

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQKIFS+LE +C P  IL+TNTSTID+  V +K  + +RI+GAHFFSPAHVM L EI+RT
Sbjct: 384 KQKIFSDLESSCRPDAILSTNTSTIDITKVAQKMKNPERIVGAHFFSPAHVMQLFEIIRT 443

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T  QV++D + + K IKK PVVVGNCTGFAVNR FFPY+ SA LL+ LG D + ID+A
Sbjct: 444 DITPPQVLVDTLGLSKQIKKTPVVVGNCTGFAVNRVFFPYTMSACLLLDLGCDPYAIDNA 503

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG+PIGPF+L DL G+ V  A    F + FP+R ++  ++  L+ S R G+ +G G 
Sbjct: 504 IRMFGMPIGPFRLGDLVGHDVGVAVGSNFIEDFPERVYRCAMIPSLVASKRLGEKSGSGF 563

Query: 421 YTYEKGSKPKPDP-SVLPIIEECR-RLSNIMPGG------KPISVTEKEIVEMILFPVVN 472
           Y + KG    PDP  + P++   R    + +P           ++T+ +IVEMI FPVVN
Sbjct: 564 YVH-KGKTSLPDPEGIAPLLAASRANARSQLPASAFAADAPLAALTQSDIVEMIFFPVVN 622

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+CR L EG+VVRA DLD A++LGM FP +RGGIV WAD+VGA  +   L++WS  YG  
Sbjct: 623 EACRCLAEGVVVRAGDLDTAAILGMGFPPFRGGIVHWADSVGAKRIADRLREWSTRYGGI 682

Query: 533 FKPSRFLEERATKGIPLS-APVSSSSTSR 560
           ++P  +LE+ A +G  LS  P+     S+
Sbjct: 683 YQPCPYLEDCAVQGRTLSEGPIKGPDRSK 711


>gi|424513537|emb|CCO66159.1| predicted protein [Bathycoccus prasinos]
          Length = 730

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/574 (45%), Positives = 365/574 (63%), Gaps = 16/574 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRT 53
           MML SK ITSEEG +LGL+D VV  +        +++ +   A  IA   K    SL RT
Sbjct: 162 MMLQSKEITSEEGARLGLVDEVVEDDGKSGNDRAVVEAAVRVAKRIANGEKQRQFSLTRT 221

Query: 54  DKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 112
           DKL     +   ++ +A  +AKK    +P    C++ ++ G+  G   G+ KE+++F++ 
Sbjct: 222 DKLPRDAKQTMGIMAVAEGKAKKIKAVLPHASYCVEAVKVGLEKGSAEGLRKESEMFQKA 281

Query: 113 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY 172
           V    ++GLVH FFA RAT+ VP +TD  L+P  V+ V V+GGGLMGSGIATA +L+ + 
Sbjct: 282 VKSPAAKGLVHFFFASRATASVPGITDQKLRPSEVKSVGVVGGGLMGSGIATACLLSGME 341

Query: 173 VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
           VVLKE+  E+L  GI+ IEAN+  +V +GK+  +KA   +  ++G LD  +F +VDMVIE
Sbjct: 342 VVLKEIKPEFLQAGIQRIEANIGSMVKKGKMKPEKAKAIVGRVRGTLDDRDFANVDMVIE 401

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AVIE++ LK+KIFS LE    P CIL+TNTSTI +     +  + +R+IGAHFFSPAHVM
Sbjct: 402 AVIENLDLKRKIFSTLESIVKPSCILSTNTSTISIAKCASEMRNPERLIGAHFFSPAHVM 461

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            L EI+R ++T  Q+++D +   K IKK PVVVGNCTGF VNR FFPY+ SA +LV LG 
Sbjct: 462 QLFEIIRVDQTPPQILVDTLAFSKKIKKTPVVVGNCTGFCVNRVFFPYTMSATVLVDLGC 521

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
           D + ID  I  FG+P+GPF+L DL G  V     K F + FP+R ++SPL+  LL + R 
Sbjct: 522 DPYAIDRVISMFGMPMGPFRLADLVGMEVGVHVGKNFIEDFPERVYESPLIPSLLDAKRL 581

Query: 413 GKANGKGLYTYEKGSKPKPD-PSVLPIIEECRRLSNIMPGGKP--ISVTEKEIVEMILFP 469
           G+    G Y+Y+   K  PD  ++ P IE  R+   +   G P  +  + ++IVEMI FP
Sbjct: 582 GEKTKSGFYSYDDRRKASPDMDAIAPFIENARKNRKVPLPGHPEQLGFSAQDIVEMIFFP 641

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           VVNE+CRVL+EG+ V+A+D+D ASVLGM FP +RGGI+ WAD +GA  +Y  L ++ + Y
Sbjct: 642 VVNEACRVLDEGVAVKAADVDVASVLGMGFPPFRGGILHWADQMGAKKIYARLTEFGKKY 701

Query: 530 GNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 563
           G  ++P  +L   A +G  +     +   +RARL
Sbjct: 702 GGLYEPCAYLTNCAHQGKTI-----AEGPNRARL 730


>gi|449472443|ref|XP_004153595.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like, partial [Cucumis sativus]
          Length = 356

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/341 (62%), Positives = 270/341 (79%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE + LGL+DA+V  EEL+  +R WALDI+ RRKPWI SLH+T+KL SL+
Sbjct: 16  MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 75

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +ARE+ K AR Q +K APN+     C+DV+E G+V G  +G+ KE + F+ L+  DTS+ 
Sbjct: 76  DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 135

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 136 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 195

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  FKDVDMVIEAVIE++ L
Sbjct: 196 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 255

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+I  +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GAHFFSPAH+MPLLE+VRT
Sbjct: 256 KQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGAHFFSPAHIMPLLEVVRT 315

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 341
            RT+ QVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+
Sbjct: 316 NRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRMFFPYT 356


>gi|308802091|ref|XP_003078359.1| putative tetrafunct (ISS) [Ostreococcus tauri]
 gi|116056811|emb|CAL53100.1| putative tetrafunct (ISS) [Ostreococcus tauri]
          Length = 1573

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/474 (50%), Positives = 319/474 (67%), Gaps = 4/474 (0%)

Query: 91   EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 150
            EE +  G  +G+ +E   FK+ V    ++GLVH FFAQRAT+ VP VTD GLKPR ++ V
Sbjct: 1099 EEALKLGPEAGLQREPVNFKKAVSSPAAKGLVHFFFAQRATNIVPGVTDGGLKPRVMKSV 1158

Query: 151  AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 210
             V+GGGLMGSGIATA +L  I VVLKE+  E+L  G+  I++N+  +V +G++T+DKA  
Sbjct: 1159 GVVGGGLMGSGIATACLLAGIGVVLKEIKQEFLDAGVGRIQSNLASMVRKGRMTEDKARK 1218

Query: 211  ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270
             + ++K  L   +F+  DMVIEAVIE++ LKQKIF  LEK C P CIL+TNTSTID+  +
Sbjct: 1219 LMSLVKPTLSDDDFRQCDMVIEAVIENLDLKQKIFCNLEKICRPDCILSTNTSTIDITKI 1278

Query: 271  GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 330
              K  + +RI+GAHFFSPAHVM L EI+RT+ T +Q+++D + + K I+K PVVVGNCTG
Sbjct: 1279 ATKMKNPERIVGAHFFSPAHVMQLFEIIRTKDTPSQILVDTLGLSKQIRKTPVVVGNCTG 1338

Query: 331  FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 390
            FAVNR FFPY+ SA  LV +G D + ID AI  FG+P+GPF+L DL G+ V     K F 
Sbjct: 1339 FAVNRVFFPYTMSATALVDIGCDPYAIDRAIMMFGMPMGPFRLGDLVGHDVGVHVGKNFI 1398

Query: 391  KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 450
              FPDR +QSPL+  LL S R G+ +G G Y Y+   +  PDP  +  +    R    +P
Sbjct: 1399 DDFPDRVYQSPLIPSLLASKRLGEKSGAGFYKYDNKRRATPDPEGVEGLIAASRAQTRLP 1458

Query: 451  ---GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 507
                  P  +T +EI EMI FPVVNE+CRVL+EGIVV+A D+D AS+LGM FP++RGGIV
Sbjct: 1459 LDGSSIPNGLTPQEIAEMIFFPVVNEACRVLDEGIVVKAGDIDTASILGMGFPAFRGGIV 1518

Query: 508  FWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLS-APVSSSSTSR 560
             W D+VGA  + T L+ W+  YG  ++P  +LE  A +G  L+  P+ +   SR
Sbjct: 1519 HWGDSVGAAVIATKLRTWATRYGGLYQPCPYLENCAIQGRTLAQGPLDTKLKSR 1572


>gi|355388877|gb|AER62381.1| hypothetical protein [Pseudoroegneria spicata]
          Length = 339

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/338 (64%), Positives = 271/338 (80%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPIICIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR +RKVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIRKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLTGTLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|355388899|gb|AER62392.1| hypothetical protein [Henrardia persica]
 gi|355388901|gb|AER62393.1| hypothetical protein [Henrardia persica]
          Length = 339

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/338 (64%), Positives = 270/338 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRIIGAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|355388873|gb|AER62379.1| hypothetical protein [Psathyrostachys juncea]
          Length = 339

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/339 (64%), Positives = 270/339 (79%)

Query: 31  VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 90
           ++R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVI
Sbjct: 1   IARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60

Query: 91  EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 150
           EEGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KV
Sbjct: 61  EEGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKV 120

Query: 151 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 210
           A++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180

Query: 211 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270
           AL +L G L Y +FK+VD+VIEAVIE V LKQ+IF++LEK CP HCILATNTSTIDLN++
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240

Query: 271 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 330
           GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300

Query: 331 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           FAVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 301 FAVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|355388897|gb|AER62391.1| hypothetical protein [Eremopyrum triticeum]
          Length = 339

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/338 (64%), Positives = 270/338 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPQAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|449472180|ref|XP_004153517.1| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal fatty acid
           beta-oxidation multifunctional protein MFP-a-like,
           partial [Cucumis sativus]
          Length = 350

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/345 (60%), Positives = 270/345 (78%)

Query: 104 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 163
           +E + F+ L+  DTS+ L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIA
Sbjct: 1   QEIEDFQVLLHADTSKSLIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIA 60

Query: 164 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223
           TA IL+N +V+LKEVN ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  
Sbjct: 61  TALILSNYHVILKEVNEKFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYES 120

Query: 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 283
           FKDVDMVIEAVIE++ LKQ+I  +LEK CPPHCILATNTSTIDL+++GEKT+S DRI+GA
Sbjct: 121 FKDVDMVIEAVIENISLKQQIIVDLEKYCPPHCILATNTSTIDLDLIGEKTNSHDRIVGA 180

Query: 284 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 343
           HFFSPAHVMPLLE+VRT RT+ QVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+Q+
Sbjct: 181 HFFSPAHVMPLLEVVRTNRTAPQVIVDLVDVGKRIKKTPVVVGNCTGFAVNRIFFPYTQA 240

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
           A LLV  GVD ++ID AI  FG+P+GPF+L+DL G+GVA AT  +F + FPDR+F+S ++
Sbjct: 241 ALLLVEHGVDPYQIDRAIYKFGMPMGPFRLIDLVGFGVAIATGGQFVQNFPDRTFKSMII 300

Query: 404 DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNI 448
            L+ +  R G+   KG Y Y+K  K KPDP +   IE+ R +S I
Sbjct: 301 PLMQEDKRAGETTQKGFYLYDKNRKSKPDPELKKYIEKARSMSGI 345


>gi|355388881|gb|AER62383.1| hypothetical protein [Taeniatherum caput-medusae]
 gi|355388903|gb|AER62394.1| hypothetical protein [Triticum monococcum subsp. aegilopoides]
          Length = 339

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/338 (64%), Positives = 270/338 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|355388889|gb|AER62387.1| hypothetical protein [Psathyrostachys juncea]
          Length = 339

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/339 (64%), Positives = 270/339 (79%)

Query: 31  VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 90
           ++R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVI
Sbjct: 1   IARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVI 60

Query: 91  EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKV 150
           EEGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KV
Sbjct: 61  EEGIVSGPRAGLWKEANAFQGLLFSDTCKNLLHVFFSQRATSKVPGATDLGLMPRKITKV 120

Query: 151 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 210
           A++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   
Sbjct: 121 AILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEK 180

Query: 211 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270
           AL +L G L Y +FK+VD+VIEAVIE V LKQ+IF++LEK CP HCILATNTSTIDLN++
Sbjct: 181 ALSLLSGALGYEKFKEVDLVIEAVIEDVKLKQQIFADLEKYCPSHCILATNTSTIDLNLI 240

Query: 271 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 330
           GEKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTG
Sbjct: 241 GEKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTG 300

Query: 331 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           FAVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 301 FAVNRMFFPYTQSALLFVDHGMDVYKIDRACTKFGMPMG 339


>gi|355388891|gb|AER62388.1| hypothetical protein [Australopyrum retrofractum]
          Length = 339

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/338 (63%), Positives = 270/338 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|355388869|gb|AER62377.1| hypothetical protein [Aegilops tauschii]
          Length = 339

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/338 (63%), Positives = 270/338 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGI+ G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|355388879|gb|AER62382.1| hypothetical protein [Taeniatherum caput-medusae]
          Length = 339

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/338 (63%), Positives = 270/338 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  ++AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRVKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 339


>gi|355388907|gb|AER62396.1| hypothetical protein [Hordeum marinum subsp. marinum]
          Length = 337

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 216/336 (64%), Positives = 269/336 (80%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQSLLFSDTCKCLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           AVNR FFPY+QSA LLV  G+DV++ID A   FG+P
Sbjct: 302 AVNRMFFPYTQSALLLVDYGMDVYKIDRACTKFGMP 337


>gi|355388919|gb|AER62402.1| hypothetical protein [Dasypyrum villosum]
          Length = 337

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/336 (63%), Positives = 267/336 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+ +   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLBAGIDRIKANLQSRVRKGKMTEQRYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337


>gi|355388885|gb|AER62385.1| hypothetical protein [Dasypyrum villosum]
          Length = 337

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/336 (63%), Positives = 267/336 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+ +   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337


>gi|355388883|gb|AER62384.1| hypothetical protein [Dasypyrum villosum]
          Length = 337

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/336 (63%), Positives = 267/336 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+ +   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLDAGIDRIKANLQSRVRKGKMTEQRYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 337


>gi|355388913|gb|AER62399.1| hypothetical protein [Aegilops speltoides var. ligustica]
          Length = 325

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/323 (64%), Positives = 260/323 (80%)

Query: 35  WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 94
           WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIEEGI
Sbjct: 2   WALDICELRKPWIKSLYKTDKLEPLGEAREILKFARSQARKQAANLEHPLVCIDVIEEGI 61

Query: 95  VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIG 154
           + G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA++G
Sbjct: 62  ISGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILG 121

Query: 155 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 214
           GGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL +
Sbjct: 122 GGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSL 181

Query: 215 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 274
           + G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT
Sbjct: 182 VTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKT 241

Query: 275 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 334
            SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVN
Sbjct: 242 KSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVN 301

Query: 335 RAFFPYSQSARLLVSLGVDVFRI 357
           R FFPY+QSA L V  G+DV++I
Sbjct: 302 RMFFPYTQSALLFVDYGMDVYKI 324


>gi|355388887|gb|AER62386.1| hypothetical protein [Agropyron mongolicum]
          Length = 335

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 216/335 (64%), Positives = 267/335 (79%)

Query: 33  RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 92
           R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIEE
Sbjct: 1   RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60

Query: 93  GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 152
           GIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA+
Sbjct: 61  GIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAI 120

Query: 153 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 212
           +GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180

Query: 213 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272
            +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240

Query: 273 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 332
           KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300

Query: 333 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           VNR FFPY+QSA L V  G+DV++ID A   FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335


>gi|355388871|gb|AER62378.1| hypothetical protein [Dasypyrum villosum]
          Length = 338

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 214/337 (63%), Positives = 268/337 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EG+V G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGVVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+ +   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVILKEVNEKFLNAGIDRIKANLQSRVRKGKMTEQRYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 368
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338


>gi|355388905|gb|AER62395.1| hypothetical protein [Hordeum bogdanii]
          Length = 338

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/337 (63%), Positives = 269/337 (79%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   +KPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 2   ARRWALDICELKKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLICIDVIE 61

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 62  EGIVSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVA 121

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 122 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKA 181

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L +L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 182 LSLLSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 241

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 242 EKTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 301

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 368
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+
Sbjct: 302 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPM 338


>gi|355388923|gb|AER62404.1| hypothetical protein [Secale cereale]
          Length = 335

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/335 (64%), Positives = 266/335 (79%)

Query: 33  RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 92
           R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIEE
Sbjct: 1   RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIEE 60

Query: 93  GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 152
           GIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA+
Sbjct: 61  GIVSGPRAGLWKEANXFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120

Query: 153 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 212
           +GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180

Query: 213 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272
            +  G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLXXGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240

Query: 273 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 332
           KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300

Query: 333 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           VNR FFPY+QSA L V  G+DV++ID A   FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335


>gi|355388909|gb|AER62397.1| hypothetical protein [Aegilops longissima]
          Length = 335

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/335 (63%), Positives = 266/335 (79%)

Query: 33  RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 92
           R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIEE
Sbjct: 1   RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60

Query: 93  GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 152
           GIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA+
Sbjct: 61  GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120

Query: 153 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 212
           +GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180

Query: 213 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272
            ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240

Query: 273 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 332
           KT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300

Query: 333 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           VNR FFPY+QSA L V  G+DV++ID A   FG+P
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMP 335


>gi|355388921|gb|AER62403.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
          Length = 338

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/338 (63%), Positives = 267/338 (78%)

Query: 32  SRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIE 91
           +R WALDI   RKPWI+SL++TD L  L EARE+LK AR QA+K A N+     C+DVIE
Sbjct: 1   ARRWALDICELRKPWIKSLYKTDXLEPLGEAREILKFARAQARKQAANLEHPLXCIDVIE 60

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
           EGIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA
Sbjct: 61  EGIVSGPRAGLWKEANAFQXLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIXKVA 120

Query: 152 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA 211
           ++GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   A
Sbjct: 121 ILGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYXKA 180

Query: 212 LKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271
           L +  G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++G
Sbjct: 181 LSLXTGXLGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIG 240

Query: 272 EKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331
           EKT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGF
Sbjct: 241 EKTKSQDRIVGAHFFSPAHVMPLLEIVXTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGF 300

Query: 332 AVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIG 369
           AVNR FFPY+QSA L V  G+DV++ID A   FG+P+G
Sbjct: 301 AVNRMFFPYTQSALLFVDYGMDVYKIDRACTKFGMPMG 338


>gi|355388893|gb|AER62389.1| hypothetical protein [Australopyrum retrofractum]
          Length = 333

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/333 (64%), Positives = 265/333 (79%)

Query: 33  RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 92
           R WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIEE
Sbjct: 1   RRWALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60

Query: 93  GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 152
           GIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA+
Sbjct: 61  GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120

Query: 153 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 212
           +GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180

Query: 213 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272
            ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240

Query: 273 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 332
           KT SQDRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300

Query: 333 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
           VNR FFPY+QSA L V  G+DV++ID A   FG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333


>gi|355388895|gb|AER62390.1| hypothetical protein [Eremopyrum bonaepartis]
          Length = 332

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/331 (64%), Positives = 265/331 (80%)

Query: 35  WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 94
           WALDI   RKPWI+SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIEEGI
Sbjct: 2   WALDICELRKPWIKSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEGI 61

Query: 95  VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIG 154
           V G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA++G
Sbjct: 62  VSGPRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILG 121

Query: 155 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 214
           GGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL +
Sbjct: 122 GGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSL 181

Query: 215 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 274
           L G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT
Sbjct: 182 LSGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKT 241

Query: 275 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 334
           +SQDRIIGAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVN
Sbjct: 242 NSQDRIIGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVN 301

Query: 335 RAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
           R FFPY+QSA L V  G+DV++ID A   FG
Sbjct: 302 RMFFPYTQSALLFVDYGMDVYKIDRACTKFG 332


>gi|452820125|gb|EME27172.1| peroxisomal fatty acid beta-oxidation multifunctional protein
           [Galdieria sulphuraria]
          Length = 1153

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 251/573 (43%), Positives = 356/573 (62%), Gaps = 34/573 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEE-LLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 59
           +ML +K +  +E  KLGL+ A+V  EE LL  ++  AL+IA   +     L RTDKLGS 
Sbjct: 162 VMLQTKVLKGQEANKLGLLAALVDGEEELLATAKKVALEIAQGLRERKNHLKRTDKLGSP 221

Query: 60  SEAREVLKLAR--LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
            +  ++ + AR  L   K     PQ+Q CL+ I  G+ +GG +G+  E + F+ELV   T
Sbjct: 222 EQWNKIEQFARSELSKSKMIKGQPQYQECLETIMYGVRNGGEAGLQYERRKFRELVSSPT 281

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGV--RKVAVIGGGLMGSGIATAHILNNIYVVL 175
           ++ L+HVFFA RATSK+  +  +  + +G   +K AV+GGGLMGSGIAT+ +   I VV+
Sbjct: 282 AKSLIHVFFATRATSKLDAIPGVSTEYKGKLPKKCAVVGGGLMGSGIATSILACGIPVVV 341

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-FKDVDMVIEAV 234
           KEV+ ++       IEAN+     R KL+Q+  NNA ++L    ++ + F+DVD+VIEA 
Sbjct: 342 KEVDEQFAKAARTRIEANLESFRKRSKLSQEALNNAKRILTVTTEFDDKFRDVDLVIEAA 401

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV 291
           IE V LKQ+IF+ L K   P CILATNTS+ID++++     K + + R++GAHFFSPAH+
Sbjct: 402 IEDVRLKQEIFATLGKLVKPDCILATNTSSIDIDLIATACPKATEEGRVVGAHFFSPAHI 461

Query: 292 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS-L 350
           M LLEIVR  RTSA+VI DL+T+GK + K P+VVGNC GFAVNR +FP S  + +LV+ L
Sbjct: 462 MQLLEIVRINRTSARVIQDLVTLGKKMGKTPIVVGNCVGFAVNRMYFPQSNVSDILVTYL 521

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSG 410
           G+  +RID     FGLP+GPF+L DL G+ V+ A     + A+ DR F+S L+  +++ G
Sbjct: 522 GLCPYRIDQVAEEFGLPMGPFKLRDLVGFDVSVAVGGVAEVAYADRVFRSSLLKSMIEKG 581

Query: 411 RNGKANGKGLYTYEKGSK--PKPDPSVLPIIE----ECRRLSNIMPGGKP-----ISVTE 459
           R G+ +G G Y Y   S+   K + SV   IE    E R+ ++ +    P      ++ +
Sbjct: 582 RKGQKSGAGFYRYSSQSRQPQKDEESVKSFIEAASKEVRQTASKLDIRAPEQSFIQNIKD 641

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
            +I++M++ PVVNE  RVLEEGI  RASDLD ASVLGM FP+Y+GGI+FWA +    +  
Sbjct: 642 NDIIDMLILPVVNEGMRVLEEGISQRASDLDIASVLGMGFPAYKGGIMFWAQSQ-FGHSG 700

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 552
             LK+   LY            RAT   P+ AP
Sbjct: 701 AILKRLDYLY------------RATGNCPMFAP 721


>gi|355388875|gb|AER62380.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
          Length = 333

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/333 (63%), Positives = 264/333 (79%)

Query: 33  RLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEE 92
           R WALDI   RKPWI+SL++TD+L  L EARE+LK AR QA+K A N+     C+DVIEE
Sbjct: 1   RRWALDICELRKPWIKSLYKTDRLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEE 60

Query: 93  GIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 152
           GIV G  +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA+
Sbjct: 61  GIVSGPRAGLWKEANAFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAI 120

Query: 153 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL 212
           +GGGLMGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL
Sbjct: 121 LGGGLMGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKAL 180

Query: 213 KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272
            ++ G L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GE
Sbjct: 181 SLVTGALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGE 240

Query: 273 KTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFA 332
           KT SQDRI+GAHFFSPAHVMPLLEIV T+ TSAQV++DL+ VGK IKK P+VVGNCTGFA
Sbjct: 241 KTKSQDRIVGAHFFSPAHVMPLLEIVCTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFA 300

Query: 333 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
           VNR FFPY+QSA L V  G+DV++ID A   FG
Sbjct: 301 VNRMFFPYTQSALLFVDYGMDVYKIDRACTKFG 333


>gi|218196124|gb|EEC78551.1| hypothetical protein OsI_18514 [Oryza sativa Indica Group]
          Length = 391

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/403 (50%), Positives = 285/403 (70%), Gaps = 13/403 (3%)

Query: 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217
           MGSGIATA +L+N  V+LKEVN ++L  GI  I+AN++  V +GK+T++     L +L G
Sbjct: 1   MGSGIATALMLSNYPVLLKEVNDKFLDAGIDRIKANLQSRVRKGKMTKEIYEKTLSLLTG 60

Query: 218 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 277
           V+DY  FKD      AV+E+V +KQ++F++LE+ CP HC+LATNTSTIDL+++GEKT+SQ
Sbjct: 61  VVDYERFKD------AVVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQ 114

Query: 278 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 337
           DRI        AHVMPLLEIVR+  TS QV++DL+ VGK IKK PVVVGNCTGFAVNR F
Sbjct: 115 DRI-------AAHVMPLLEIVRSNHTSPQVVVDLLDVGKKIKKTPVVVGNCTGFAVNRMF 167

Query: 338 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 397
            PY+  A LLV  G+DV++ID     FG+P+GPF+LLDL G+GVA A+  ++ +  P   
Sbjct: 168 SPYTSIALLLVDRGMDVYKIDQVCTEFGMPMGPFRLLDLVGFGVALASGMQYLENSPGSV 227

Query: 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISV 457
            +S L+ L+ +  R G+A+ KG Y YE   K  PDP +   +E+ RR++  +P  + + +
Sbjct: 228 DKSMLIPLMFEDKRTGEASQKGFYKYEGNRKAIPDPDIFKYVEKSRRMAGTVPDLELLKL 287

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
            +KEIVEM+ FPV+NE+C+VL EGI  +ASDLD AS+ GM FP YRGGIV+WAD++GA  
Sbjct: 288 DDKEIVEMVFFPVINEACQVLSEGIANKASDLDIASIFGMGFPPYRGGIVYWADSIGAKR 347

Query: 518 VYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSR 560
           ++  L +W   +G  F+P  +L ERA +G+PLS+   +++ +R
Sbjct: 348 IHARLSEWEMKHGQLFRPCSYLSERAAEGVPLSSTAKNNAKAR 390


>gi|355388867|gb|AER62376.1| hypothetical protein [Hordeum vulgare subsp. spontaneum]
          Length = 315

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 205/315 (65%), Positives = 253/315 (80%)

Query: 38  DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 97
           DI   RKPWI+SL++TDKL SL EARE+LK AR QA+K A N+     C+DVIEEGIV G
Sbjct: 1   DICELRKPWIKSLYKTDKLESLGEAREILKFARAQARKQAANLEHPLICIDVIEEGIVSG 60

Query: 98  GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 157
             +G+ KEA  F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA++GGGL
Sbjct: 61  PRAGLWKEANAFQGLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKIMKVAILGGGL 120

Query: 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217
           MGSGIATA IL+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL +L G
Sbjct: 121 MGSGIATAMILSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLLSG 180

Query: 218 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 277
            L Y +FK+VD+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQ
Sbjct: 181 ALGYEKFKEVDLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQ 240

Query: 278 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 337
           DRI+GAHFFSPAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR F
Sbjct: 241 DRIVGAHFFSPAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMF 300

Query: 338 FPYSQSARLLVSLGV 352
           FPY+QSA L V  G+
Sbjct: 301 FPYTQSALLFVDYGL 315


>gi|355388915|gb|AER62400.1| hypothetical protein [Brachypodium sp. D49c]
          Length = 306

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/305 (64%), Positives = 243/305 (79%)

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+LK AR QA+K A N+     C+DVIEEGIV G  +G+ KEA  F+ L+  DT + 
Sbjct: 2   EAREILKFARAQARKQAANLEHPLLCIDVIEEGIVSGPRAGLWKEATTFQVLLFSDTCKS 61

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFF+QRATSKVP  TD+GL PR + KVA++GGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 62  LVHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMILSNYPVILKEVNE 121

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  I+AN++  V +GK+T+++   AL ++ G L Y  FK+VD+VIEAVIE+V L
Sbjct: 122 KFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYENFKEVDLVIEAVIENVKL 181

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 182 KQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFSPAHVMPLLEIVRT 241

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L V  G+DV++ID A
Sbjct: 242 QHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLFVDYGMDVYKIDRA 301

Query: 361 IRSFG 365
              FG
Sbjct: 302 CTKFG 306


>gi|355388911|gb|AER62398.1| hypothetical protein [Aegilops speltoides subsp. speltoides]
          Length = 304

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/304 (64%), Positives = 244/304 (80%)

Query: 48  RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAK 107
           +SL++TDKL  L EARE+LK AR QA+K A N+     C+DVIEEGIV G  +G+ KEA 
Sbjct: 1   KSLYKTDKLEPLGEAREILKFARAQARKQAANLEHPLVCIDVIEEGIVSGPRAGLWKEAN 60

Query: 108 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 167
            F+ L+  DT + L+HVFF+QRATSKVP  TD+GL PR + KVA++GGGLMGSGIATA I
Sbjct: 61  AFQSLLFSDTCKSLLHVFFSQRATSKVPGATDLGLMPRKITKVAILGGGLMGSGIATAMI 120

Query: 168 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227
           L+N  V+LKEVN ++L  GI  I+AN++  V +GK+T+++   AL ++ G L Y +FK+V
Sbjct: 121 LSNYPVLLKEVNEKFLNAGIDRIKANLQSRVRKGKMTEERYEKALSLVTGALGYEKFKEV 180

Query: 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 287
           D+VIEAVIE+V LKQ+IF++LEK CP HCILATNTSTIDLN++GEKT SQDRI+GAHFFS
Sbjct: 181 DLVIEAVIENVKLKQQIFADLEKYCPSHCILATNTSTIDLNLIGEKTKSQDRIVGAHFFS 240

Query: 288 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 347
           PAHVMPLLEIVRT+ TSAQV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA L 
Sbjct: 241 PAHVMPLLEIVRTQHTSAQVVVDLLDVGKRIKKTPIVVGNCTGFAVNRMFFPYTQSALLF 300

Query: 348 VSLG 351
           V  G
Sbjct: 301 VDYG 304


>gi|222622588|gb|EEE56720.1| hypothetical protein OsJ_06222 [Oryza sativa Japonica Group]
          Length = 273

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 174/273 (63%), Positives = 226/273 (82%), Gaps = 1/273 (0%)

Query: 292 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 351
           MPLLEIVRTE+TS Q ILDL+TVGK+IKKVPVVVGNCTGFAVNR FFPY+Q + LLVS+G
Sbjct: 1   MPLLEIVRTEKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIG 60

Query: 352 VDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGR 411
           +DVFRID  I SFG+P+GPFQL DLAGYGVA A    +  AF  R+  S LVDL++++GR
Sbjct: 61  IDVFRIDRVISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGR 120

Query: 412 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
            GK+NGKG Y YEKG KPKPDPSV  +I+E RR +  MPGGKP+++++++I+EMI FPVV
Sbjct: 121 QGKSNGKGYYLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVV 180

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+CRV++E +V+RASDLD AS+LGM FP +RGG+VFWAD +GA Y+++ L KW+++YG+
Sbjct: 181 NEACRVMDENVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGD 240

Query: 532 FFKPSRFLEERATKGIPLSAP-VSSSSTSRARL 563
           FFKPS +LE+RA + +PLSAP  +  ++SR+R+
Sbjct: 241 FFKPSSYLEDRAKRSLPLSAPNATQQASSRSRM 273


>gi|159482618|ref|XP_001699366.1| hypothetical protein CHLREDRAFT_132158 [Chlamydomonas reinhardtii]
 gi|158273002|gb|EDO98796.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 705

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 227/534 (42%), Positives = 307/534 (57%), Gaps = 63/534 (11%)

Query: 46  WIRSLHRT--------DKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 97
           ++ SLHR         DKL  L EA  +L +AR +A + A  +   Q CLD ++ G+  G
Sbjct: 199 FLHSLHRPSLSTPSPPDKLPPLGEALALLDMARAEAGRRARGLAHPQLCLDAVQAGVERG 258

Query: 98  GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI-GLKPRGVRKVAVIGGG 156
           G  G+  E + F     LDT + LVH+FFAQRAT KV  VTD+ GLKPR +R VAV+GGG
Sbjct: 259 GQEGLAAEGRAFAAAAALDTHKALVHIFFAQRATKKVKGVTDVPGLKPRPIRCVAVLGGG 318

Query: 157 LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 216
           LMGSGIATA  L  + V+LKEV                     +G ++Q  A+ AL  + 
Sbjct: 319 LMGSGIATALALAGVEVILKEVK--------------------KGAMSQAAADAALGRVS 358

Query: 217 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS- 275
           G LDY+ F   DMVIEAVIE +PLKQKIF++LEKAC P  IL+TNTSTID+ +VG K S 
Sbjct: 359 GALDYAGFARADMVIEAVIEDIPLKQKIFADLEKACRPDAILSTNTSTIDIELVGAKMSG 418

Query: 276 ---SQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TGF 331
              ++ R++GAHFFSPAH+MPLLEIVRT+ T AQV                  G C  G 
Sbjct: 419 GAAARRRLLGAHFFSPAHIMPLLEIVRTKDTGAQV---------------GAWGACGRGL 463

Query: 332 AVNRAFFPYSQSARLLVSLGVD----------VFRIDSAIRSFGLPIGP-FQLLDLAGYG 380
              RA   +++   L+ +   D             +  A      P+ P  QL DL G  
Sbjct: 464 RGRRAVVEWARRGLLVEAHACDRTPQLENSRNTRWVTVATERITAPVHPLLQLNDLVGSD 523

Query: 381 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE-KGSKPKPDPSVL-PI 438
           +       F  +FPDR + S L+  L ++ R G+  GKG Y ++ K  K  PDP  L P+
Sbjct: 524 IGLHVGANFVTSFPDRVYVSRLIPALNEAKRLGEKTGKGFYKFDAKTRKASPDPEGLAPL 583

Query: 439 IEECRRLSNIMP-GGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 497
           +E  RR + ++P G KP ++++++I++ I FPVVNE CRV+ EGIV +A+DLD ASV+ M
Sbjct: 584 LEGSRREAALVPAGAKPPALSDQDILDWIFFPVVNEGCRVVAEGIVDKAADLDVASVMAM 643

Query: 498 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 551
            FP  RGG++FWAD VGA  +   LK+++ ++  FF P  +L + A  G  LSA
Sbjct: 644 GFPPVRGGLIFWADLVGAPRIVARLKQFAAMHAGFFAPCDYLLQAAASGRKLSA 697


>gi|449019169|dbj|BAM82571.1| fusion protein of glyoxysomal fatty acid oxidation tetrafunctional
           protein, and acetyl-CoA acyltransferase [Cyanidioschyzon
           merolae strain 10D]
          Length = 1145

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 228/563 (40%), Positives = 328/563 (58%), Gaps = 42/563 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS---EELLKVSRLWALDIAA---RRKPWIRSLHRTD 54
           M++ S+ I  EE  + GL+D +V +   E LL+ +   AL++A+   +  P +  L RTD
Sbjct: 160 MIMHSRIIDGEEAHRCGLVDRLVPASRRETLLREACAVALEVASDPQKMPPPL--LTRTD 217

Query: 55  KLGSLS-EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG-YSGVLKEAKVFKEL 112
           KLG+   E      L R    +      Q ++C+  + EGI  GG  +G   EA++F++ 
Sbjct: 218 KLGNADVEKIRSKYLPRAVEMRQKTGQIQFESCVRAVLEGIERGGGDAGWALEAELFRQC 277

Query: 113 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR--GVRKVAVIGGGLMGSGIATAHILNN 170
              + SR L+HVF A R T     VT+   +P     R VAVIGGGLMGSGIA   + N 
Sbjct: 278 AASEASRALIHVFLASRRT-----VTNFKAEPHLHEPRTVAVIGGGLMGSGIAACILQNG 332

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE--FKDVD 228
             VVLKEVN   L   I+ IEA    +++R K+  D A+ A + L+G +++ +  F DVD
Sbjct: 333 GRVVLKEVNENALAAAIQRIEA----ILSRAKV--DTAD-ARRRLQGTIEFDKKLFSDVD 385

Query: 229 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHF 285
           +V+EA +E+V  KQ IF  L +   PHCILATNTSTI+L+++GE   +   + R+IGAHF
Sbjct: 386 LVVEAAVENVQAKQGIFRSLAECTGPHCILATNTSTINLDLIGEAIPQVHKEGRLIGAHF 445

Query: 286 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSAR 345
           FSPAHVMPLLEIVR  RT  + +  ++   K ++K P++VGNC GFAVNR +FP +Q A 
Sbjct: 446 FSPAHVMPLLEIVRANRTRNRAVQMVLAFAKHLRKTPIIVGNCAGFAVNRMYFPQTQMAF 505

Query: 346 LLVS-LGVDVFRIDSAIRS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
            L   LG+  + ID A +   GLP+GPF L DL G  +  + ++ F  ++P+R     + 
Sbjct: 506 FLTEYLGIHPYDIDRACQEVLGLPMGPFGLADLVGLDICDSVNQVFSMSYPERVCSLSIA 565

Query: 404 DLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
             L++ GR G+ +G G Y Y     KP  D  +L  +     L+++ P      +T  +I
Sbjct: 566 GKLIEMGRKGQKSGAGFYRYGADHRKPIEDREMLDPL-----LASMTPPPLREPLTPLDI 620

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAV--GANYVYT 520
           V+MI FPVVNE+ RVLEE I  +A+DLD ASVLG  FP+YRGG+++WA  +  G   +  
Sbjct: 621 VQMIFFPVVNEAMRVLEERIADKAADLDVASVLGYGFPAYRGGLLYWAQHLPGGPRLILE 680

Query: 521 SLKKWSQLYGN---FFKPSRFLE 540
            L++W   +G     F PS  LE
Sbjct: 681 RLREWDTRFGTQCPLFAPSFALE 703


>gi|62320284|dbj|BAD94583.1| AIM1 protein [Arabidopsis thaliana]
          Length = 399

 Score =  362 bits (928), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 173/236 (73%), Positives = 209/236 (88%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+LLSKSI+SEEG KLGLIDA+V   ++L  SR WALDIA  RKP+++SLHRTDK+GSLS
Sbjct: 163 MILLSKSISSEEGHKLGLIDALVPPGDVLSTSRKWALDIAEERKPFLQSLHRTDKIGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR +LK +R  AKK APNMPQH AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++G
Sbjct: 223 EARAILKNSRQLAKKIAPNMPQHHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKG 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVHVFFAQRATSKVPNVTD+GLKPR ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NS
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINS 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E+L+KGIK++EAN++ LV+RGKLTQDKA  AL + KGVLDY+EF DVDMVIE  ++
Sbjct: 343 EFLMKGIKSVEANMKSLVSRGKLTQDKAGKALSLFKGVLDYTEFNDVDMVIEVCLQ 398


>gi|222622587|gb|EEE56719.1| hypothetical protein OsJ_06221 [Oryza sativa Japonica Group]
          Length = 448

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 178/265 (67%), Positives = 213/265 (80%), Gaps = 2/265 (0%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK IT++EG + GL+DA+ + +EL+K+SRLWAL+IA  RKPWIRSL RTD+LGSLS
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EAR VL  AR QAKK A N+PQHQACLDV+EEG++ GG++GVLKEAKVFKELV+  TS+ 
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIATA +++N  VVLKEVN 
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L +G K I AN+ GLV RG LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402

Query: 241 KQKIFSELEKACPPHCILATNTSTI 265
           KQ IFS+LEK    H  L T    I
Sbjct: 403 KQSIFSDLEKCM--HTTLHTCNKHI 425


>gi|115463427|ref|NP_001055313.1| Os05g0362100 [Oryza sativa Japonica Group]
 gi|54287655|gb|AAV31399.1| putative glyoxysomal fatty acid beta-oxidation multifunctional
           protein [Oryza sativa Japonica Group]
 gi|113578864|dbj|BAF17227.1| Os05g0362100 [Oryza sativa Japonica Group]
 gi|215712327|dbj|BAG94454.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 465

 Score =  337 bits (864), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 158/290 (54%), Positives = 219/290 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L+SK +   E  K GL+DAVV+++EL+  +  WAL+I   ++PW RSLHRTD+L +L 
Sbjct: 159 MLLMSKPLKGVEAHKFGLVDAVVSADELISTACSWALEIVEDKRPWFRSLHRTDRLPALE 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E +++L  AR+QA+K + ++     C+DVIEEGI+ G  +G++KE    K L M   S+ 
Sbjct: 219 ETKKILNFARVQAQKQSASLQHPLVCIDVIEEGIISGPRAGLMKETLCGKMLEMSQISKS 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L HVFFAQRATSK+PN++ +GL PR + KVA++GGGLMGSGIATA I NN+ V+LKEVN 
Sbjct: 279 LRHVFFAQRATSKIPNISILGLTPRRIHKVAIVGGGLMGSGIATALISNNLLVILKEVNE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  GI  ++AN++ LV RG++T++   N L +L GVLDY +F++ D+VIEAVIE + L
Sbjct: 339 QFLDAGISRVKANLQSLVKRGQMTKEDYENKLSLLSGVLDYEQFREADVVIEAVIEDLSL 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           KQKIF++LEK C  +CILATNTSTIDL+++G+KTS QDRI GAHFFSP +
Sbjct: 399 KQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPCN 448


>gi|149378483|ref|ZP_01896167.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
           DG893]
 gi|149357234|gb|EDM45772.1| fatty oxidation complex, alpha subunit [Marinobacter algicola
           DG893]
          Length = 697

 Score =  333 bits (854), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 199/552 (36%), Positives = 297/552 (53%), Gaps = 10/552 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + +++   L ++DAV    ++      +A  +A   KP  R    TDKL    
Sbjct: 152 MITTGEFVGAKDALALSIVDAVEDGSDIKAAGLAYAQKVADEGKPVRRVRDLTDKL-QAD 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +  +V +  R   +K A  +     C+D +E         GV +E ++F E +      G
Sbjct: 211 KGSDVFEQFRAGLQKKARGLFSPFKCVDAVEAAFSLPFEDGVKRERELFMECMESPQRAG 270

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  SKV  ++      R +R V VIG G MG GIA       I V + EV  
Sbjct: 271 LVHSFFAEREVSKVKGLSK-DTPVRDIRTVGVIGAGTMGGGIAMNFANAGIPVTIAEVKQ 329

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L KG+  I  N      +G++TQ +    + ++ G L Y +F DVD+VIEAV ES  L
Sbjct: 330 EALDKGLAVIRRNYENTAKKGRITQAQVEERMSLISGTLTYDDFSDVDLVIEAVFESRDL 389

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+KIF +L+ AC P  ILA+NTST+ ++ +   T     +IG HFFSPA+VM LLEIVR 
Sbjct: 390 KRKIFGQLDDACKPGAILASNTSTLSIDDIAAATKRPQDVIGLHFFSPANVMKLLEIVRG 449

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS +V    M + K I+KV V+VGNC GF  NR        A  LV+ G    ++D  
Sbjct: 450 EKTSDEVKATAMALAKKIRKVGVMVGNCYGFVGNRMLHKRGAEAMALVNEGASPQQVDKV 509

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +   G P+G F + DLAG  +  +  +E  KA  D    +  +D L + GR G+    G+
Sbjct: 510 LTDLGFPMGQFAMSDLAGIDIGYSIRQERRKAGED--VPASWMDKLAEQGRLGQKTQAGV 567

Query: 421 YTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE+G+ KP PDP V  +I E R    I    K   +T++EI+E  ++ +VNE  ++LE
Sbjct: 568 YKYEEGNRKPIPDPEVDRVIAEFREEQGI----KSRDITDQEILERCMYVMVNEGAKILE 623

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK-WSQLYGNFFKPSRF 538
           EGI  R+ D+D   + G  FP+YRGG +FWAD +G + +  ++++ +  L G  +KP+  
Sbjct: 624 EGIADRSLDIDITWIYGYGFPAYRGGPMFWADQIGLDIILGTVEQFYDDLGGEQWKPAAL 683

Query: 539 LEERATKGIPLS 550
           L++  ++G   S
Sbjct: 684 LQKLVSEGRKFS 695


>gi|209963882|ref|YP_002296797.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
 gi|209957348|gb|ACI97984.1| peroxisomal bifunctional enzyme [Rhodospirillum centenum SW]
          Length = 698

 Score =  330 bits (847), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 197/554 (35%), Positives = 303/554 (54%), Gaps = 15/554 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW-ALDIAARRKPWIRSLHRTDKLGSL 59
           M+   + + + +  +LG++DA+V  + +    R   ALD+A    P+ R   R +++ + 
Sbjct: 152 MITSGEFVPAPKAHELGILDAIVEGDPVDGAVRFAEALDLAG---PYPRVRDRAERIAA- 207

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
                V    R   +KTA  +   Q C+D ++         G+ +E ++F + +    S 
Sbjct: 208 DRGSAVFDEKRRALEKTARGLFAPQRCVDAVQAAAELPFEEGLKRERELFGQCMAHPQSA 267

Query: 120 GLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            L+HVFFA+RA  K+P+V  D   +P  V   AV+G G MG GIA       I V L E 
Sbjct: 268 ALIHVFFAERAIGKIPDVPADTPARP--VATAAVLGAGTMGGGIAMNFANAGIPVTLLET 325

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           + E L +G+ TI  N  G V +G+LTQ + +  L ++   LD +     DMV+EAV E +
Sbjct: 326 SQEALDRGLATIARNYAGTVAKGRLTQAEMDRRLSLITPTLDMAALAGADMVVEAVFEDM 385

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ +F  L+    P  +LATNTST+D++ +   TS    +IG HFFSPA+VM LLE+V
Sbjct: 386 AVKQDVFRRLDTVAKPGAVLATNTSTLDIDAIAAVTSRPADVIGMHFFSPANVMKLLEVV 445

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R   T+  VI   M  G+ I KV V+VGNC GF  NR   PYS+ A LLV  G    ++D
Sbjct: 446 RGSATARDVIATAMQTGRKIGKVSVLVGNCDGFVGNRMLMPYSRQAELLVEEGAWPEQVD 505

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A++ +G+ +GPF + DLAG  V     +   +    ++  SPL D L    R G+  G 
Sbjct: 506 KALQDWGMAMGPFAMGDLAGVDVTWRIRQR--RLAEGKAAGSPLTDRLYLMDRYGQKTGA 563

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G + YE GS+ P PD  V  +IE  R    I    +P +++++EIV+ +++ +VNE  + 
Sbjct: 564 GWFRYEAGSRTPLPDDVVKRMIENHRETHQI----QPRAISDEEIVKRMIYALVNEGAKA 619

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           LEEG+ +RASD+D   + G  FP++RGG + +AD+VG   V   ++ + Q +G  + P+ 
Sbjct: 620 LEEGMALRASDIDVIYLYGYGFPAWRGGPMHYADSVGLPTVLADIRDFQQRFGGDWTPAP 679

Query: 538 FLEERATKGIPLSA 551
            LE  A +G   +A
Sbjct: 680 LLERLAAEGSSFAA 693


>gi|223946607|gb|ACN27387.1| unknown [Zea mays]
          Length = 269

 Score =  328 bits (842), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 149/272 (54%), Positives = 203/272 (74%), Gaps = 3/272 (1%)

Query: 292 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 351
           MPLLEIVRT+ TS QV++DL+ VGK IKK P+VVGNCTGFAVNR FFPY+QSA   V LG
Sbjct: 1   MPLLEIVRTQHTSPQVVVDLLDVGKKIKKTPIVVGNCTGFAVNRMFFPYTQSALFYVDLG 60

Query: 352 VDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGR 411
           +DV++ID A   FG+P+GPF+L DL G+GVA AT  ++ + FP+R ++S L+ L+++  R
Sbjct: 61  MDVYKIDRACTKFGMPMGPFRLADLVGFGVAVATGMQYLENFPERVYKSMLLPLMMEGNR 120

Query: 412 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
            G+A  KG Y YE   K  PDP ++  IE+ R ++ + P  + + ++EK+IVEM+ FPV+
Sbjct: 121 AGEATQKGFYKYEGKRKATPDPEIMKYIEKSRSMAGVTPDPELMKLSEKDIVEMVFFPVI 180

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+CRVL+EGI V+ASDLD AS+ GM FP YRGG++ WAD++GA Y++  L++W++ YG 
Sbjct: 181 NEACRVLDEGIAVKASDLDIASIFGMGFPPYRGGVMHWADSIGAKYIHGKLEEWTKRYGG 240

Query: 532 FFKPSRFLEERATKGIPLSAPVSSSSTSRARL 563
           FFKP  +L ERA KGIPLSAP   +   +ARL
Sbjct: 241 FFKPCSYLAERAAKGIPLSAP---TKKVQARL 269


>gi|385333682|ref|YP_005887633.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
 gi|311696832|gb|ADP99705.1| fatty oxidation complex alpha subunit [Marinobacter adhaerens HP15]
          Length = 702

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 194/548 (35%), Positives = 299/548 (54%), Gaps = 10/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + +++   LG++DAV   +++  V   +A  +    KP  R    TDK+    
Sbjct: 157 MITTGEFVGAKDALALGILDAVEEGDDIRAVGMAYAQKVVDEGKPVRRVRDITDKI-EAD 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +  +V    R + KK A  +     C+D +E         G+ +E ++F E +      G
Sbjct: 216 KGSDVFDQFRDELKKRARGLFSPFKCVDAVEAAFNLPFDEGMKRERELFMECMESPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FF +R  SKV  ++      R V+ V +IG G MG GIA   +   I V + EV  
Sbjct: 276 LIHSFFGEREVSKVKGLSK-DTPVRDVKSVGIIGAGTMGGGIAMNFVNVGIPVTIVEVKQ 334

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L KG+  I  N      +GKLTQ++    + ++   L Y +F+DVD+VIEAV E++ +
Sbjct: 335 EALDKGLAIIRRNYENSAKKGKLTQEQVEQRMALITPSLTYDDFRDVDLVIEAVFENMAI 394

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K++IF++L++ C P  ILA+NTST+D++ +   T   + ++G HFFSPA+VM LLE VR 
Sbjct: 395 KKEIFAKLDEVCKPGAILASNTSTLDIDEIASATKRPEDVVGMHFFSPANVMKLLENVRG 454

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +TS +V   +M V K IKKV V+VGNC GF  NR        A  LV  G    ++D  
Sbjct: 455 SKTSDEVKATVMAVAKKIKKVGVMVGNCYGFVGNRMLHKRGTEAMSLVDEGATPQQVDKV 514

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +   G P+G F + DLAG  V     +E  KA  D    +  +D L + GR G+    G+
Sbjct: 515 LTDLGFPMGQFAMSDLAGIDVGYRIREERRKAGED--IPASWMDKLAEQGRLGQKTQAGV 572

Query: 421 YTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE+GS KP PDP V  +IE+ R+   I     P  +T +EI+E  ++ ++NE  ++LE
Sbjct: 573 YKYEEGSRKPIPDPEVEQLIEQFRKEQGIT----PREITNQEILERCVYVMINEGAKILE 628

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFKPSRF 538
           EGI  R  D+D   + G  FP+YRGG +FWAD  G + + +++KK+   + G  ++P+  
Sbjct: 629 EGIADRPLDIDIVWIYGYGFPAYRGGPMFWADQEGLDTILSAVKKYQDTVGGEQWEPAAL 688

Query: 539 LEERATKG 546
           LE+   +G
Sbjct: 689 LEKLVAEG 696


>gi|389876490|ref|YP_006370055.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
 gi|388527274|gb|AFK52471.1| peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
          Length = 710

 Score =  327 bits (839), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 191/548 (34%), Positives = 303/548 (55%), Gaps = 12/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   K + + +  +LG+IDAVV  +EL+  +  +A  +     P  R     +K+ +  
Sbjct: 163 MITTGKFVPAGKALQLGIIDAVV--DELIPGAVAFARKLVEDGAPLRRVRDMDEKVKAFD 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  L   R Q  K A        C D +   +      G+  E ++F  L+  D S+ 
Sbjct: 221 AAK--LPEIRKQVVKAARGQMSPVGCFDAVAGAVTLPFDEGLKNEREIFGGLMASDQSKA 278

Query: 121 LVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H+FFA+R   K+P+V  D    P  +R+ A+IG G MG GIA       I V + E++
Sbjct: 279 LRHIFFAEREALKIPDVPGDTPTLP--IRQAAIIGAGTMGGGIAMNFANAGIPVKVLEMS 336

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           ++ L +G+  I AN    V++G+LTQD  +  + +++GVLDY   KD D++IEAV E + 
Sbjct: 337 ADALERGLGIIRANYAATVSKGRLTQDAMDKRMGLIEGVLDYDALKDADIIIEAVFEEMD 396

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+K+FS L+    P  +LA+NTST+D++ +   TS  + +IG HFFSPA+VMPLLE+VR
Sbjct: 397 IKKKVFSTLDAVAKPGAVLASNTSTLDIDEIAATTSRPEFVIGTHFFSPANVMPLLELVR 456

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +TS QVI   M + K I KVPV+VGNC GF  NR   PY Q   L++  G    ++D 
Sbjct: 457 GAKTSYQVISTSMKLAKTIGKVPVLVGNCDGFVGNRMLEPYVQQGELMLVEGALPAQVDG 516

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            ++ +GL +GPF + D+AG  V+    K       +  F   + D + + GR G+    G
Sbjct: 517 VLQRWGLAMGPFTMGDMAGLDVSWRIRKRRAATRRNDLFWPTVSDQICEMGRFGQKTKAG 576

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE GS+ P  DP +  +I E  + + +    +   ++E EI++  L+ ++NE  + L
Sbjct: 577 YYLYEGGSRTPVTDPKIEQLIVEASKAAGV----ERREISEDEILKRSLYALINEGAKCL 632

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEG+ +RASD+D     G  FP++RGG +F AD +G + V   +K++     + +KP++ 
Sbjct: 633 EEGMAIRASDIDVIYCFGYGFPAWRGGPMFQADLIGLDKVLADIKQFHADLDDRWKPAKL 692

Query: 539 LEERATKG 546
           +E    +G
Sbjct: 693 IETLVAEG 700


>gi|358451689|ref|ZP_09162122.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
 gi|357224158|gb|EHJ02690.1| peroxisomal bifunctional enzyme [Marinobacter manganoxydans MnI7-9]
          Length = 697

 Score =  327 bits (837), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 194/551 (35%), Positives = 300/551 (54%), Gaps = 16/551 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + + +   LG++DAV   +++  V   +A  +    KP  R    TDK+ +  
Sbjct: 152 MITTGEFVGANDALALGILDAVEEGDDIRAVGMAYAQKVVDEGKPVRRVRDITDKIDA-D 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +  +V    R + KK A  +     C+D +E         G+ +E ++F E +      G
Sbjct: 211 KGSDVFDQFRDELKKRARGLFSPFKCVDAVEAAFNLPFDEGMKRERELFMECMESPQRAG 270

Query: 121 LVHVFFAQRATSKV---PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           L+H FF +R  SKV   P  T +    R V+ V +IG G MG GIA   +   I V + E
Sbjct: 271 LIHSFFGEREVSKVKGLPKDTPV----RDVKSVGIIGAGTMGGGIAMNFVNVGIPVTIVE 326

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V  + L KG+  I  N      +GKLTQ++    + ++   L Y +F+DVD+VIEAV E 
Sbjct: 327 VKQDALDKGLAIIRRNYENSAKKGKLTQEQVEQRMALITTSLTYDDFRDVDLVIEAVFED 386

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K++IF++L++ C P  ILA+NTST+D++ +   T   + ++G HFFSPA+VM LLE 
Sbjct: 387 MAIKKEIFAKLDEVCKPGAILASNTSTLDIDEIASATKRPEDVVGMHFFSPANVMKLLEN 446

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR  +TS +V   +M V K IKKV V+VGNC GF  NR        A  LV  G    ++
Sbjct: 447 VRGSKTSDEVKATVMAVAKKIKKVGVMVGNCYGFVGNRMLHKRGTEAMSLVDEGATPQQV 506

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D  +   G P+G F + DLAG  V     +E  KA  D    +  +D L + GR G+   
Sbjct: 507 DKVLTDLGFPMGQFAMSDLAGIDVGYRIREERRKAGED--IPASWMDKLAEQGRLGQKTQ 564

Query: 418 KGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
            G+Y YE+GS KP PDP V  +IE+ R+   I     P  ++++EI+E  ++ ++NE  +
Sbjct: 565 AGVYKYEEGSRKPIPDPEVEQLIEQFRKEQGIT----PREISDQEILERCVYVMINEGAK 620

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFKP 535
           +LEEGI  R  D+D   + G  FP+YRGG +FWAD  G + + +++KK+   + G  ++P
Sbjct: 621 ILEEGIADRPLDIDIVWIYGYGFPAYRGGPMFWADQEGLDTILSAVKKYQDTVGGEQWEP 680

Query: 536 SRFLEERATKG 546
           +  LE+   +G
Sbjct: 681 AALLEKLVAEG 691


>gi|146280495|ref|YP_001170648.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
 gi|145568700|gb|ABP77806.1| enoyl-CoA hydratase [Pseudomonas stutzeri A1501]
          Length = 701

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 304/549 (55%), Gaps = 12/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           M++  + I + E  +  ++D +   + L++    +A  +    +   RS  +T  L G  
Sbjct: 152 MIVSGQPIGAAEALEHHIVDELFEGD-LIEAGLTYARRLVEEGRGPRRSGEQTRGLEGVD 210

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +EA  +++    +  K  P +     C+  +E         G+ +E ++F E +      
Sbjct: 211 NEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEAATRLPLAEGLKRERELFTECLNSPQRG 268

Query: 120 GLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            L+H FFA+R   K+ ++ +D+ L+P  +R  AVIGGG MG GIA +     + V L E+
Sbjct: 269 ALIHSFFAERQAGKIDDLPSDVKLRP--IRTAAVIGGGTMGVGIALSFANTGVPVKLLEI 326

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N E L +G++         V RG LT+D     L ++ GV DY    D D+V+EAV E +
Sbjct: 327 NDEALQRGLQRARETYAASVKRGSLTEDAMEQRLALIAGVTDYGALADADVVVEAVFEEM 386

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ++F +L+  C P  ILA+NTS++DLN +   T   + ++G HFFSPA+VM LLE+V
Sbjct: 387 GVKQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVV 446

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R ERTS +V+   M +GK +KKV VVVG C GF  NR  F Y + A  L+  G    ++D
Sbjct: 447 RGERTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
           +A+R+FG+ +GPF + DL+G  +  A  K      P       + D L  +G  G+  G 
Sbjct: 507 AALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGA 566

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y YE G++ P+ +P + P++E   R   I    +  ++ E+ IVE  +F +VNE  ++
Sbjct: 567 GYYRYEPGNRTPQENPDLAPMLEAASREKGI----ERKALDEQYIVERCIFALVNEGAKI 622

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           LEEGI  R+SD+D   + G  FP++RGG +++AD+VG + V   +K+     G+++KP+ 
Sbjct: 623 LEEGIAQRSSDIDVIYLNGYGFPAFRGGPMYYADSVGLDKVLARVKELHARCGDWWKPAP 682

Query: 538 FLEERATKG 546
            LE+ A +G
Sbjct: 683 LLEKLAAEG 691


>gi|339492228|ref|YP_004712521.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
 gi|338799600|gb|AEJ03432.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
          Length = 701

 Score =  325 bits (832), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 303/549 (55%), Gaps = 12/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           M++  + I + E  +  ++D +   + L++    +A  +    +   RS  +T  L G  
Sbjct: 152 MIVSGQPIGAAEALEHHIVDELFEGD-LIEAGLTYARRLVEEGRGPRRSGEQTRGLEGVD 210

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +EA  +++    +  K  P +     C+  +E         G+ +E ++F E +      
Sbjct: 211 NEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEAATRLPLAEGLKRERELFTECLNSPQRG 268

Query: 120 GLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            L+H FFA+R   K+ ++ +D+  KPR +R  AVIGGG MG GIA +     + V L E+
Sbjct: 269 ALIHSFFAERQAGKIDDLPSDV--KPRPIRTAAVIGGGTMGVGIALSFANAGVPVKLLEI 326

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + L +G++         V RG LT+D     L ++ GV DY    D D+V+EAV E +
Sbjct: 327 NDDALQRGLQRARETYAASVKRGSLTEDAMEQRLALITGVTDYGALADADVVVEAVFEEM 386

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ++F +L+  C P  ILA+NTS++DLN +   T   + ++G HFFSPA+VM LLE+V
Sbjct: 387 GVKQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTRRPEDVVGLHFFSPANVMRLLEVV 446

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R ERTS +V+   M +GK +KKV VVVG C GF  NR  F Y + A  L+  G    ++D
Sbjct: 447 RGERTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
           +A+R+FG+ +GPF + DL+G  +  A  K      P       + D L  +G  G+  G 
Sbjct: 507 AALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGA 566

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y YE G++ P+ +P + P++E   R   I    +  ++ E+ IVE  +F  VNE  ++
Sbjct: 567 GYYRYEPGNRTPQENPDLAPMLEAASREKGI----ERKALDEQYIVERCIFAQVNEGAKI 622

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           LEEGI  R+SD+D   + G  FP++RGG +++AD+VG + V   +K+     G+++KP+ 
Sbjct: 623 LEEGIAQRSSDIDVIYLNGYGFPAFRGGPMYYADSVGLDKVLARVKELHARCGDWWKPAP 682

Query: 538 FLEERATKG 546
            LE+ A +G
Sbjct: 683 LLEKLAAEG 691


>gi|386018756|ref|YP_005936780.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
 gi|327478728|gb|AEA82038.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 4166]
          Length = 701

 Score =  324 bits (830), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 303/549 (55%), Gaps = 12/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           M++  + I + E  +  ++D +   + L++    +A  +    +   RS  +T  L G  
Sbjct: 152 MIVSGQPIGAAEALEHYIVDELFEGD-LIEAGLTYARRLVEEGRGPRRSGEQTRGLEGVD 210

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +EA  +++    +  K  P +     C+  +E         G+ +E ++F E +      
Sbjct: 211 NEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEAATRLPLAEGLKRERELFTECLNSPQRG 268

Query: 120 GLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            L+H FFA+R   K+ ++ +D+   PR +R  AVIGGG MG GIA +     + V L E+
Sbjct: 269 ALIHSFFAERQAGKIDDLPSDV--TPRPIRTAAVIGGGTMGVGIALSFANAGVPVKLLEI 326

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N E L +G++         V RG LT+D     L ++ GV DY    D D+V+EAV E +
Sbjct: 327 NDEALQRGLQRARETYAASVKRGSLTEDAMEQRLALIAGVTDYGALADADVVVEAVFEEM 386

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ++F +L+  C P  ILA+NTS++DLN +   T   + ++G HFFSPA+VM LLE+V
Sbjct: 387 GVKQQVFEQLDAVCKPGAILASNTSSLDLNAIAGFTRRPEDVVGMHFFSPANVMRLLEVV 446

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R ERTS +V+   M +GK +KKV VVVG C GF  NR  F Y + A  L+  G    ++D
Sbjct: 447 RGERTSDEVLAAAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVD 506

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
           +A+R+FG+ +GPF + DL+G  +  A  K      P       + D L  +G  G+  G 
Sbjct: 507 AALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGA 566

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y YE G++ P+ +P + P++E   R   I    +  ++ E+ IVE  +F +VNE  ++
Sbjct: 567 GYYRYEPGNRTPQENPDLAPMLEAASREKGI----ERQALDEQYIVERCIFALVNEGAKI 622

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           LEEGI  R+SD+D   + G  FP++RGG +++AD+VG + V   +K+     G+++KP+ 
Sbjct: 623 LEEGIAQRSSDIDVIYLNGYGFPAFRGGPMYYADSVGLDKVLARVKELHARCGDWWKPAP 682

Query: 538 FLEERATKG 546
            LE+ A +G
Sbjct: 683 LLEKLAAEG 691


>gi|359790820|ref|ZP_09293699.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
           alhagi CCNWXJ12-2]
 gi|359253181|gb|EHK56342.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
           alhagi CCNWXJ12-2]
          Length = 694

 Score =  323 bits (828), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/468 (40%), Positives = 257/468 (54%), Gaps = 14/468 (2%)

Query: 85  ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 144
           AC   +   I       +  E ++F +LV  D SR   H+FFA+R  +KVP V    + P
Sbjct: 233 ACAQSVRNAITLPFDEALAAERELFTKLVSGDQSRAQRHLFFAEREATKVPGVGK-EVAP 291

Query: 145 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 204
           R +R+V VIG G MG GIA A +   I V L E+N E L +G+ TIE N    V+RG L+
Sbjct: 292 REIRRVGVIGAGTMGGGIAMAFVNGGIPVTLLEMNREALDRGLATIEKNYAISVSRGSLS 351

Query: 205 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264
           +D     + +     DY++  + D+VIEAV E + +K+++FS+L+    P  ILATNTS 
Sbjct: 352 EDAKAGRMALFAPTTDYADLAECDLVIEAVFEDMAVKREVFSKLDAVAKPTAILATNTSY 411

Query: 265 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 324
           +D+N +   TS    ++G HFFSPA+VM LLEIVR E+T+  V+   + V K I KVPVV
Sbjct: 412 LDVNEIAASTSRPQDVLGLHFFSPANVMKLLEIVRGEKTAPDVLATALGVAKRIGKVPVV 471

Query: 325 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 384
           VG C GF  NR     S  A  L+  G     ID     FG P+GPFQ+ DLAG  +   
Sbjct: 472 VGVCHGFVGNRMLSARSADAENLLLEGASPDEIDKVFTGFGWPMGPFQMYDLAGLDIGWR 531

Query: 385 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECR 443
             K        R   + + D L + GR G+  GKG Y YE GS+ P PDP V  +IE+  
Sbjct: 532 NRKA-------RGQLAVIADRLCEQGRFGQKTGKGFYLYENGSRTPVPDPEVTQLIEDSA 584

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
           R   +       +V   EI+E  L+P+VNE  ++LEEGI  RASD+D     G  FP  +
Sbjct: 585 RERGV----SRRAVPAGEIIERTLYPMVNEGTKILEEGIAARASDIDIVWTNGYGFPVGK 640

Query: 504 GGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKGIPLS 550
           GG +FWAD  G   +   L+ W    G + F+PS  L+  A +G PLS
Sbjct: 641 GGPMFWADFEGLPKIIERLEYWHGGNGKDVFRPSALLKRIAAEGSPLS 688


>gi|167586951|ref|ZP_02379339.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
           ubonensis Bu]
          Length = 694

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/515 (37%), Positives = 284/515 (55%), Gaps = 11/515 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA+   + LL  +  +A  + A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAMAEGD-LLDAAVAFARKVGAQAGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  AK  APN P    C+D IE G++HG   GV+ E   F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSAKAAAPNFPAPHKCIDAIEAGVLHGFDHGVIAERDGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R VR+VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REVRQVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  + ++   L Y++ KD D++IEAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYADLKDADLIIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++A  P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRQLDEAAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GEATAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  +   + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHYPK-IADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYAPGER-KAKPSAL--VDEMIVAYSQERGVERRKMGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 514
           E I  +ASD+D   + G  FP +RGG + +AD VG
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVG 656


>gi|398806814|ref|ZP_10565713.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
 gi|398087179|gb|EJL77776.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. CF318]
          Length = 702

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 199/535 (37%), Positives = 283/535 (52%), Gaps = 17/535 (3%)

Query: 18  LIDAVVTSEELLKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E L    L +A  ++  R  P +R L      G         + AR   K 
Sbjct: 172 LFDKLAASPESLAQEALAFAQSVSDTRPLPLVRELRAKHPNGD-----AYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E + F  L+    SR L H+F A+RA SK+P
Sbjct: 227 MAKNFPAPLKCVDAVEAATKKKFEEGMALEREFFINLMWTPESRALRHIFMAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V +   K R +  VAVIG G MG GIA   +   + V + E+  E L KGI  I+ N  
Sbjct: 287 DVPEDTPK-REINSVAVIGAGTMGGGIAMNFLNAGVPVKILEMKQEALDKGIGIIKKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL QDK    + +L   L Y + KD DMVIEAV E + +K+K+F EL++   P 
Sbjct: 346 AQVKKGKLKQDKYEQRMSLLSTTLSYDDLKDADMVIEAVFEDMGVKEKVFKELDRVMKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR  +T   V+  +M VG
Sbjct: 406 AILASNTSTLDVNQIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGAKTGKDVLATVMAVG 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    Y +    L+  G    ++D AI  FG  +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAIEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y  G +   P+  
Sbjct: 526 LAGNDIGWAIRKRRYTEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVPGKRDAIPNAE 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V+ +IE+ R    I P      ++++EIV+ ++F +VNE+  +LEEGI  +ASD+D   +
Sbjct: 585 VVKMIEDHRASLGITPR----KISDEEIVQRLVFSLVNEAAHILEEGIASKASDIDMVYI 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
           +G  FP YRGG + +AD +G   V  S+ +++Q       F+KP+  L + A +G
Sbjct: 641 MGYGFPVYRGGPMLYADQLGLFNVVQSMNRFAQNPLDDAKFWKPAPLLAKLAAEG 695


>gi|410619733|ref|ZP_11330627.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
 gi|410160865|dbj|GAC34765.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola polaris LMG 21857]
          Length = 702

 Score =  321 bits (823), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 187/492 (38%), Positives = 279/492 (56%), Gaps = 18/492 (3%)

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+    R   KK A      + C+  +E  +      G+++E ++F E +    +R   H
Sbjct: 212 ELFAQYRQGLKKQARGFFAPERCIQAVEASVSLPFEQGLVREGELFMECMGSKEARAQQH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
            FFA+RA S V +  D     R +++V +IG G MG GIA       I V++ E+  E L
Sbjct: 272 FFFAERAASHVSDY-DKSTPVRDIKQVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEAL 330

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            KG+  I  N      +GKLTQ      + +L G  +Y+   DVD+VIEAV E + +K++
Sbjct: 331 DKGLALIRKNYENSAKKGKLTQQAVEERMALLTGSTEYAALSDVDLVIEAVFEKMSVKKE 390

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F+ L+K C P  ILA+NTST+D+N + E TS  + +IG HFFSPA+VM LLE+V+ ++T
Sbjct: 391 VFAALDKVCKPGAILASNTSTLDVNEIAESTSRPEDVIGLHFFSPANVMKLLEVVKADKT 450

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           SA+VI   M + K I KV V+VG C GF  NR   PY + A  L+  G    ++D  I  
Sbjct: 451 SAEVIKTSMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQVDKIIYD 510

Query: 364 FGLPIGPFQLLDLAGYGVA---AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           FGLP+GPF + D+AG  +      + +EF +  P     S   D L+K GR G  +G+G 
Sbjct: 511 FGLPMGPFTMGDMAGLDIGFYVRESRREFIEHDPSYCVVS---DRLVKQGRVGLKSGRGA 567

Query: 421 YTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE G++ P PDP V+ +  EE  RL     G     ++E+EI+E I+FP++NE   +L
Sbjct: 568 YMYEPGNRTPIPDPEVVEMAKEEAARL-----GVAQRDISEQEILERIIFPLINEGALIL 622

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW----SQLYGNFFK 534
           EEGI  ++SD+D   V G  FP YRGG + +AD +G   VY ++ K+     +  G++F+
Sbjct: 623 EEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEIGLKKVYDAMCKYRDELGEYGGHWFE 682

Query: 535 PSRFLEERATKG 546
           P+  L++ A +G
Sbjct: 683 PAPLLKKLAEQG 694


>gi|121604744|ref|YP_982073.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
 gi|120593713|gb|ABM37152.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas naphthalenivorans CJ2]
          Length = 699

 Score =  321 bits (822), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 198/535 (37%), Positives = 285/535 (53%), Gaps = 17/535 (3%)

Query: 18  LIDAVVTS-EELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D + +S E L   +  +A  IA  R  P +RSL    + G         + AR   K 
Sbjct: 172 LFDRMASSVETLADEAFAFAQAIADTRPLPLVRSLPCKHRNGD-----AYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E + F  L+    SR L H+F A+RA SK+P
Sbjct: 227 MAKNFPAPLKCVDAVEAATKQKFDEGMRLEREFFTNLMFTPESRALRHIFMAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           ++     K R +  VAVIG G MG GIA   +   I V + E+  E L +GI TI  N  
Sbjct: 287 DLPADTPK-REINSVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKPEALERGIATIRKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL QDK    + +L   L Y + KD D+VIEAV E + +KQ +F EL++   P 
Sbjct: 346 SQVKKGKLKQDKYEQRMGLLSTTLSYGDLKDADLVIEAVFEDMGVKQAVFRELDRVMKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+DLN +   T   + ++G HFFSPA++M LLE+VR E+T   V+  +M + 
Sbjct: 406 AILASNTSTLDLNQIASFTQRPEDVVGLHFFSPANIMKLLEVVRGEKTGKDVLATVMAIA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K I+K  VV G C GF  NR    Y +    L+  G    ++D AI  FG  +GPF++ D
Sbjct: 466 KKIRKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAIEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K   +  PD  + S   DLL + GR G+  G G Y Y  G +   P+  
Sbjct: 526 LAGNDIGWAIRKRRYQEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVAGKRDAIPNQE 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V+ +IEE R    I     P  ++++EIV+ +++ +VNE   +LEEGI  +ASD+D   +
Sbjct: 585 VVKMIEEHRASLGIT----PRKISDEEIVQRLVYSLVNEGAHILEEGIASKASDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
           +G  FP YRGG + +AD VG   V  ++K++++       F+KP+  L   A +G
Sbjct: 641 MGYGFPIYRGGPMLYADQVGLFNVVQAMKRFAKNPLDDAGFWKPAPLLARLAAEG 695


>gi|332306389|ref|YP_004434240.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
           4H-3-7+YE-5]
 gi|332173718|gb|AEE22972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
           4H-3-7+YE-5]
          Length = 702

 Score =  321 bits (822), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 275/492 (55%), Gaps = 18/492 (3%)

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+    R   KK A      + C+  +E  +      G+++E ++F E +    +R   H
Sbjct: 212 ELFAQYRQGLKKQARGFFAPERCIQAVEASVALPFEQGLVREGELFMECMASKEARAQQH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
            FFA+RA + V +  D     R ++KV +IG G MG GIA       I VV+ E+  E L
Sbjct: 272 FFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVVMLELKQEAL 330

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            KG+  I  N      +GKLTQ    + + +L+G  +Y    DVD+VIEAV E + +K++
Sbjct: 331 DKGLALIRKNYENSAKKGKLTQQAVEDRMALLQGSTEYEALSDVDLVIEAVFEKMSVKKE 390

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F  L+K C P  ILA+NTST+D+N +   TS  + +IG HFFSPA+VM LLE+V+ E+T
Sbjct: 391 VFGALDKVCKPGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKT 450

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S +VI   M + K I KV V+VG C GF  NR   PY + A  L+  G    ++D  I  
Sbjct: 451 SPEVIKTSMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQVDKVIYD 510

Query: 364 FGLPIGPFQLLDLAGYGVAA---ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           FGLP+GPF + D+AG  +      + +EF    P     S   D L+K GR G  +G+G 
Sbjct: 511 FGLPMGPFTMGDMAGLDIGYYVRESRREFIAHDPSYCVVS---DRLVKQGRVGLKSGRGA 567

Query: 421 YTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE G++ P PDP V+ +  EE  RL     G +   ++++EI+E I+FP++NE   +L
Sbjct: 568 YMYEPGNRMPIPDPEVVEMAKEEAERL-----GIEQRDISDQEILERIIFPLINEGALIL 622

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FK 534
           EEGI  ++SD+D   V G  FP YRGG + +AD +G   VY ++ K+    G +    F+
Sbjct: 623 EEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEIGLKKVYEAMCKYRDELGEYGSHWFE 682

Query: 535 PSRFLEERATKG 546
           P+  L++ A +G
Sbjct: 683 PAPLLKQLAEQG 694


>gi|418293237|ref|ZP_12905154.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
 gi|379064637|gb|EHY77380.1| enoyl-CoA hydratase [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
          Length = 701

 Score =  320 bits (821), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 180/503 (35%), Positives = 281/503 (55%), Gaps = 9/503 (1%)

Query: 48  RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP---QHQACLDVIEEGIVHGGYSGVLK 104
           R+  RT +     E  +   L R +  + A  MP       C+  +E         G+ +
Sbjct: 194 RAPRRTGEQTRGIEGADNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKR 253

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E ++F E +       LVH FFA+R   K+ +++   +KPR +   AVIGGG MG GIA 
Sbjct: 254 ERELFAECLNSPQRGALVHSFFAERQAGKINDLS-AAVKPRSINTAAVIGGGTMGVGIAL 312

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
           +     + V L E+N + L +G++         V RG LT+D     L ++ GV DY+  
Sbjct: 313 SFANAGVPVKLLEINEQALQRGLQRTRETYAASVKRGSLTEDAMEQRLALITGVTDYAVL 372

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
            D D+V+EAV E + +KQ++F +L+  C P  ILA+NTS++DLN +   T   + ++G H
Sbjct: 373 ADADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTKRPEDVVGLH 432

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSA 344
           FFSPA+VM LLE+VR E+TS +V+   M +GK +KKV VVVG C GF  NR  F Y + A
Sbjct: 433 FFSPANVMRLLEVVRGEKTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREA 492

Query: 345 RLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVD 404
             L+  G    ++D+A+R+FG+ +GPF + DL+G  +  A  K      P       + D
Sbjct: 493 EFLLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSD 552

Query: 405 LLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 463
            L  +G  G+  G G Y YE G++  + +P + P++E   +   I    +  ++ E+ IV
Sbjct: 553 NLCAAGMLGQKTGAGYYRYEPGNRTAQENPDLAPMLEAASQEKGI----ERQTLDEQYIV 608

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
           E  +F +VNE  ++LEEGI  R+SD+D   + G  FP++RGG +F+AD+VG ++V   +K
Sbjct: 609 ERCIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMFYADSVGLDWVLARVK 668

Query: 524 KWSQLYGNFFKPSRFLEERATKG 546
           +     G+++KP+  LE+ A +G
Sbjct: 669 ELHARCGDWWKPAPLLEKLAAEG 691


>gi|410641551|ref|ZP_11352071.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
 gi|410645290|ref|ZP_11355757.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
 gi|410135220|dbj|GAC04156.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola agarilytica NO2]
 gi|410139084|dbj|GAC10258.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
          Length = 702

 Score =  320 bits (821), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 275/492 (55%), Gaps = 18/492 (3%)

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+    R   KK A      + C+  +E  +      G+++E ++F E +    +R   H
Sbjct: 212 ELFAQYRQGLKKQARGFFAPERCIQAVEASVALPFEQGLVREGELFMECMASKEARAQQH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
            FFA+RA + V +  D     R ++KV +IG G MG GIA       I VV+ E+  E L
Sbjct: 272 FFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVVMLELKQEAL 330

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            KG+  I  N      +GKLTQ    + + +L+G  +Y    DVD+VIEAV E + +K++
Sbjct: 331 DKGLALIRKNYENSAKKGKLTQQAVEDRMALLQGSTEYEALSDVDLVIEAVFEKMSVKKE 390

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F  L+K C P  ILA+NTST+D+N +   TS  + +IG HFFSPA+VM LLE+V+ E+T
Sbjct: 391 VFGALDKVCKPGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKT 450

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S +VI   M + K I KV V+VG C GF  NR   PY + A  L+  G    ++D  I  
Sbjct: 451 SPEVIKTSMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQVDKVIYD 510

Query: 364 FGLPIGPFQLLDLAGYGVAA---ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           FGLP+GPF + D+AG  +      + +EF    P     S   D L+K GR G  +G+G 
Sbjct: 511 FGLPMGPFTMGDMAGLDIGYYVRESRREFIAHDPSYCVVS---DRLVKQGRVGLKSGRGA 567

Query: 421 YTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE G++ P PDP V+ +  EE  RL     G +   ++++EI+E I+FP++NE   +L
Sbjct: 568 YMYEPGNRMPIPDPEVVEMAKEEAERL-----GIEQRDISDQEILERIIFPLINEGALIL 622

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FK 534
           EEGI  ++SD+D   V G  FP YRGG + +AD +G   VY ++ K+    G +    F+
Sbjct: 623 EEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEIGLKNVYEAMCKYRDELGEYGSHWFE 682

Query: 535 PSRFLEERATKG 546
           P+  L++ A +G
Sbjct: 683 PAPLLKQLAEQG 694


>gi|374294040|ref|YP_005041063.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
           lipoferum 4B]
 gi|357427443|emb|CBS90387.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Azospirillum
           lipoferum 4B]
          Length = 707

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 200/556 (35%), Positives = 295/556 (53%), Gaps = 17/556 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSL 59
           M+L    +  EE   +GL+DAV      L+   R     +A  R P   S  RTD++   
Sbjct: 162 MILSGDPVGGEEALTIGLVDAVEDDVSPLEAGLRTADRLLADGRMPEPVS-ARTDRIAGT 220

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
             A    K A L  ++  P +      +D +E  +      G  +E ++F  L  +D+ +
Sbjct: 221 DPALFTAKRAELAKRQ--PQLFSPHRIVDAVEAAVTLPFAEGTARERELF--LACMDSPQ 276

Query: 120 --GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
             GL+H FFA+R  +KVP +   G   R +RKV VIG G MG GIA       I VVL +
Sbjct: 277 RAGLIHAFFAEREVAKVPGLP-AGTPTREIRKVGVIGAGTMGGGIAMCFANAGIPVVLVD 335

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              E L +G   I  N      +G+LT  +    + +++  L Y +  D D+V+EA  ES
Sbjct: 336 SAQEALDRGTAAIRRNYEATARKGRLTAAQVEERMALIRPTLSYGDLADADLVVEAAFES 395

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ IF  L+  C P  ILATNTST+D++ +   T     ++G HFFSPA+VM LLE+
Sbjct: 396 MEVKRTIFRTLDDTCKPGAILATNTSTLDVDAIAAATGRPQDVLGMHFFSPANVMRLLEV 455

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR  RTS  V+  +M + + I KV V VG C GF  NR      + +  LV  G    ++
Sbjct: 456 VRGARTSDTVLATVMGLARRIGKVGVAVGVCYGFVGNRILHQRGRESMALVEEGASPEQV 515

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKAN 416
           D  +  FG P+G F + DLAG  V     +E  KA  D   Q+P  +D+L + GR G+  
Sbjct: 516 DRVLTEFGFPLGHFSMTDLAGIDVGWRIREERRKAG-DPEAQAPNWLDVLAERGRYGQKT 574

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
             G+Y YE GS+ P PDP V  +IEE RR   I     P +V+++E+ E  L+ +VNE+ 
Sbjct: 575 SAGVYRYEPGSRTPIPDPEVAAVIEEDRRNRGI----APRAVSDEEVRERCLYVMVNEAA 630

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFK 534
           ++LEEGI  R  D+D   + G  FPS+RGG++FWAD  G   +  S++++ + + G  ++
Sbjct: 631 KILEEGIAARPVDIDAIWLHGYGFPSWRGGLLFWADREGLGKIAASVQRYHRDIGGPQWR 690

Query: 535 PSRFLEERATKGIPLS 550
           PS  L +RA  G P+ 
Sbjct: 691 PSALLLQRAADGQPIG 706


>gi|91788435|ref|YP_549387.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
 gi|91697660|gb|ABE44489.1| 3-hydroxyacyl-CoA dehydrogenase [Polaromonas sp. JS666]
          Length = 699

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 199/535 (37%), Positives = 290/535 (54%), Gaps = 17/535 (3%)

Query: 18  LIDAVVTSEELLKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E L    L +A  IA  R  P +R+L      G         + AR   K 
Sbjct: 172 LFDRMAASPESLAEDALAFAQSIADTRPLPLVRNLPCKHPDGD-----AYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E ++F  L+    SR L H+F A+RA SK+P
Sbjct: 227 MAKNFPAPLKCVDAVEAATKKKFEDGLAFERELFINLMWTPESRALRHIFMAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V +   + R ++ +AVIG G MG GI+   +   I V + E+  E L +GI TI  N  
Sbjct: 287 DVPEDTPR-REIKSIAVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIRKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL QDK    + +L   L Y + KD DMVIEAV E + +K+K+  EL++   P 
Sbjct: 346 SQVKKGKLKQDKYEQRMSLLSTTLSYDDLKDADMVIEAVFEEMGVKEKVLKELDRVMKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D+N +   T     +IG HFFSPA+VM LLE+VR E+T+  V+  +M +G
Sbjct: 406 AILASNTSTLDMNQIASFTKRPQDVIGTHFFSPANVMKLLEVVRGEKTAKDVLATVMALG 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A+  FG  +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGATPAQVDKAVEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K   +  P   + S   DLL + GR G+  G G Y Y  G +   P   
Sbjct: 526 LAGNDIGWAIRKRRYQEKPGMKY-SKTADLLCEMGRYGQKTGAGWYDYVPGKRDAIPSQV 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V+ +IE+ R+  +I  G  P  ++++EIVE +++ +VNE+  +LEEGI  +ASD+D   +
Sbjct: 585 VVDMIEKHRK--DI--GVTPRRISDEEIVERLVYSLVNEAAHILEEGIASKASDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
            G  FP +RGG + +AD +G   V  S+ +++Q      +F+KP+  L   A +G
Sbjct: 641 TGYGFPLHRGGPMLYADQMGLFNVVQSMNRFAQNPLDDASFWKPAPLLARLAAEG 695


>gi|339328360|ref|YP_004688052.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
           N-1]
 gi|338170961|gb|AEI82014.1| fatty acid oxidation complex subunit alpha [Cupriavidus necator
           N-1]
          Length = 702

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 186/543 (34%), Positives = 295/543 (54%), Gaps = 11/543 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  + +++ E  +LG++DA+V   +L   +  +A D+A++R P  R+     ++ +  
Sbjct: 153 VILSGRHVSAGEAQRLGIVDAIVEGIDLKAAAIRFAKDVASQR-PLPRARDMVQRVAT-D 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    K + ++      L+ ++  +      GV  EA+ F EL   D ++ 
Sbjct: 211 AAMASLDAARKSIAKKSRHVKAPAYALECVQAALTMPFDEGVALEAERFVELESSDEAKA 270

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L + FFA+R  +KVP       K + +   AVIG G MGSGIA ++    I V + EV+ 
Sbjct: 271 LRYAFFAEREAAKVPGAAPAA-KTQRIGSAAVIGAGTMGSGIAMSYADAGIPVKVLEVSR 329

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G++ I+      V RG L+Q   +  + +++GV  Y    D D V+EAV E + +
Sbjct: 330 EALDRGMQRIQDTYAVRVKRGSLSQGDMDARMALIEGVQSYEAIADCDAVVEAVFERIDI 389

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ+IF  L+    P  +L TN+S ID++I+ + T+    + GAHFF+PA+VM L E+VR 
Sbjct: 390 KQEIFGRLDTVMKPGALLLTNSSAIDIDIMADATARPQDVAGAHFFAPANVMKLCEVVRG 449

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +TS + + + M + + + KV  V G+C GFA NR+  P      L++  G    +ID  
Sbjct: 450 SKTSPETVANAMKMARDMGKVCAVAGSCDGFATNRSRAPMMTETMLMLEEGATPEQIDKV 509

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-RSFQSPLVDLLLKSGRNGKANGKG 419
           +  FG P+GPF + D++G  V+    K   +A P+ R    P  D L++ GR G+  G G
Sbjct: 510 MVDFGYPMGPFAVNDISGLDVSYEGRKRRAEANPEYRKLHVP--DRLVEMGRKGQKTGAG 567

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y +G + P PD  V  +I E      I       + T++EI+  +LF  VNE+C++L
Sbjct: 568 WYAYREGDRTPYPDDVVKQVIAEVAEEFGI----PQRTFTDQEILHRLLFASVNEACKIL 623

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEG   RASD+D   + G  FP +RGG++FWAD VGA  V   + +W + YG  + PS+ 
Sbjct: 624 EEGKAYRASDIDVMWLYGFGFPRHRGGLMFWADTVGAQAVLQQVSEWHERYGKRWAPSKL 683

Query: 539 LEE 541
           L E
Sbjct: 684 LAE 686


>gi|421616221|ref|ZP_16057236.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
 gi|409781796|gb|EKN61371.1| enoyl-CoA hydratase [Pseudomonas stutzeri KOS6]
          Length = 701

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 181/501 (36%), Positives = 282/501 (56%), Gaps = 9/501 (1%)

Query: 48  RSLHRTDKL-GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEA 106
           RS  +T  L G+ +EA  +++    +  K  P +     C+  +E  +      G+ +E 
Sbjct: 198 RSGEQTRGLEGADNEA--LIRAKHAEVAKRMPGLFSPLRCVAAVEAAVKLPLAEGLKRER 255

Query: 107 KVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAH 166
           ++F E +       LVH FFA+R  SK+ N     +KPR +   AVIGGG MG GIA + 
Sbjct: 256 ELFVECLNSPQRGALVHSFFAERQASKI-NDLPADVKPRAINSAAVIGGGTMGVGIALSF 314

Query: 167 ILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226
               + V L E+N + LL+G++         V RG LT++     L ++ GV DY    D
Sbjct: 315 ANAGLPVKLLEINEDALLRGLQRARDTYAASVKRGSLTEEAMEKRLSLVTGVTDYGALAD 374

Query: 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFF 286
            D+V+EAV E + +K+++F +L+  C P  ILA+NTS++DLN +   T     ++G HFF
Sbjct: 375 ADVVVEAVFEDMDVKRQVFEQLDAVCKPGAILASNTSSLDLNAIATFTKRPQDVVGLHFF 434

Query: 287 SPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARL 346
           SPA+VM LLE+VR E+TS  V+   M +GK +KKV VVVG C GF  NR  F Y + A  
Sbjct: 435 SPANVMRLLEVVRGEKTSDDVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEF 494

Query: 347 LVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL 406
           L+  G    ++D+A+R+FG+ +GPF + DL+G  +  A  K      P       + D L
Sbjct: 495 LLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKL 554

Query: 407 LKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEM 465
            ++G  G+  G G Y YE G++ P  +P++ P++E   R   I    +   + E+ I+E 
Sbjct: 555 CEAGMLGQKTGAGYYRYEPGNRMPLENPALAPMLEAASREKGI----ERRELEEQYIIER 610

Query: 466 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 525
            +F +VNE  ++LEEGI  R+SD+D   + G  FP++RGG +F+AD+VG + V   +++ 
Sbjct: 611 TIFALVNEGAKILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMFYADSVGLDKVLARVREL 670

Query: 526 SQLYGNFFKPSRFLEERATKG 546
               G+++KP+  LE+ A +G
Sbjct: 671 HARCGDWWKPAPLLEKLAAEG 691


>gi|109898233|ref|YP_661488.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
 gi|109700514|gb|ABG40434.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
          Length = 702

 Score =  318 bits (814), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 276/492 (56%), Gaps = 18/492 (3%)

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+    R   KK A      + C+  +E  +      G+++E+++F E +    +R   H
Sbjct: 212 ELFAQYRQGLKKQARGFFAPERCIQAVEASVSLPFEQGLVRESELFMECMGSKEARAQQH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
            FFA+RA + V +  D     R ++KV +IG G MG GIA       I V++ E+  E L
Sbjct: 272 FFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEAL 330

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            KG+  I  N      +GKLTQ    + + +L+G  +Y    DVD+VIEAV E + +K++
Sbjct: 331 DKGLALIRKNYENSAKKGKLTQQAVEDRMALLQGSTEYEALSDVDLVIEAVFEKMSVKKE 390

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F  L+K C    ILA+NTST+D+N +   TS  + +IG HFFSPA+VM LLE+V+ E+T
Sbjct: 391 VFGALDKVCKKGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKT 450

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           SA VI   M + K I KV V+VG C GF  NR   PY + A  L+  G    +ID  I  
Sbjct: 451 SADVIKTCMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQIDKVIYD 510

Query: 364 FGLPIGPFQLLDLAGYGVA---AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           FGLP+GPF + D+AG  +      + +EF    P     S   D L+K GR G  +G+G 
Sbjct: 511 FGLPMGPFTMGDMAGLDIGFYVRESRREFIAHDPSYCVVS---DRLVKQGRVGLKSGRGA 567

Query: 421 YTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE G++ P PDP V+ +  EE  RL     G     ++++EI+E I+FP++NE   +L
Sbjct: 568 YMYEPGNRMPIPDPEVVEMAKEEAARL-----GIAQRDISDQEILERIIFPLINEGALIL 622

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW----SQLYGNFFK 534
           EEGI  ++SD+D   V G  FP YRGG + +AD +G   VY ++ K+     +  G++F+
Sbjct: 623 EEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEIGLKKVYDAMCKYRDELGEYGGHWFE 682

Query: 535 PSRFLEERATKG 546
           P+  L++ A +G
Sbjct: 683 PAPLLKQLAEQG 694


>gi|431929301|ref|YP_007242335.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
 gi|431827588|gb|AGA88705.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas stutzeri RCH2]
          Length = 701

 Score =  318 bits (814), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 183/548 (33%), Positives = 304/548 (55%), Gaps = 10/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           M++  + I++ E  +  ++D +   + L++    +   +    +   R+  +T  L G+ 
Sbjct: 152 MIVSGQPISAAEAVEHNIVDELFEGD-LVEAGLAYVRRMVEEGRTPRRTGEQTQGLEGAD 210

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +EA  +++    +  K  P +     C+  +E         G+ +E ++F E +      
Sbjct: 211 NEA--LIRAKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRG 268

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            LVH FFA+R   K+ ++     KPR +   AVIGGG MG GIA +     + V L E+N
Sbjct: 269 ALVHSFFAERQAGKINDLPS-DTKPRSINSAAVIGGGTMGVGIALSFANAGVPVKLLEIN 327

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G++         V RG LT+D     L +++GV +Y+   D D+V+EAV E + 
Sbjct: 328 EEALQRGLQRARDTYAASVKRGSLTEDAMEQRLALIEGVTEYAALADADVVVEAVFEEMG 387

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +KQ++F +L+  C P  ILA+NTS++DL+ +   T   + ++G HFFSPA+VM LLE+VR
Sbjct: 388 VKQQVFEQLDAICKPGAILASNTSSLDLDAIAAFTKRPEDVVGLHFFSPANVMRLLEVVR 447

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +TS +V+   M +GK +KKV VVVG C GF  NR  F Y + A  L+  G    ++D+
Sbjct: 448 GAKTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDA 507

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R+FG+ +GPF + DL+G  +  A  K      P       + D L  +G  G+  G G
Sbjct: 508 ALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCAAGMLGQKTGAG 567

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE G++ P+ +P + P++E     +++  G +  ++ E+ IVE  +F +VNE  ++L
Sbjct: 568 YYRYEPGNRTPQENPDLAPMLE----AASLEKGIERKALDEQYIVERCIFALVNEGAKIL 623

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEGI  R+SD+D   + G  FP++RGG +F+AD+VG + V   +K+     G+++KP+  
Sbjct: 624 EEGIAQRSSDIDVIYLNGYGFPAFRGGPMFYADSVGLDRVLARVKELHARCGDWWKPAPL 683

Query: 539 LEERATKG 546
           LE+ A +G
Sbjct: 684 LEKLAAEG 691


>gi|163792916|ref|ZP_02186892.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
           DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
           proteobacterium BAL199]
 gi|159181562|gb|EDP66074.1| PROBABLE TRIFUNCTONAL: ENOYL-COA HYDRATASE AND
           DELTA3-CIS-DELTA2-TRANS-ENOYL-COA ISOMERASE AND [alpha
           proteobacterium BAL199]
          Length = 699

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 190/548 (34%), Positives = 288/548 (52%), Gaps = 10/548 (1%)

Query: 2   MLLSKSITSE-EGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +++S  + SE E  KLG+IDA+   + L+  +   A+++A   +   RS   +D L    
Sbjct: 153 LIVSGRLVSEREALKLGMIDAIADGD-LIDAAVAKAIELADVGENPRRSSTLSDGLTEAQ 211

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
               +    R   +K A  M    AC+  IE         G   E + FK LV    +R 
Sbjct: 212 ANPGLFDAFRKSMEKRARGMNAPYACVRCIEAATRLPFAEGRRFEHEEFKALVTAVEARA 271

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           + H FFA+R  SK+P+V D     + +    VIG G MG GIA       I V + E + 
Sbjct: 272 MRHAFFAEREVSKIPDVPD-STPTQPIESAGVIGCGTMGGGIAMVFANAGIPVTIVESDE 330

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L  G+  I AN +  V +G+++Q   +  +  + G  D++   D D+V+EAV E + +
Sbjct: 331 GALDNGLTKIRANYQATVDKGRMSQQAMDERMASITGATDFAAIADADIVVEAVFEEMAV 390

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ++F  L+  C P  +LATNTST+D++ +   T   + +IG HFFSPA+VM LLE+VR 
Sbjct: 391 KQQVFRSLDGICQPDVVLATNTSTLDVDTIAAATGRPESVIGTHFFSPANVMRLLEVVRG 450

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            ++S Q I   M + K + KV V+VG C GF  NR    Y + A  LV  G     +D  
Sbjct: 451 AKSSPQTIATAMGLSKTLGKVGVLVGVCDGFVGNRMLHQYLREAAFLVEEGALPQDVDRV 510

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP-DRSFQSPLVDLLLKSGRNGKANGKG 419
           I  FG P+GPF + DLAG  V     K      P ++ +   L D + + GR G+  G G
Sbjct: 511 IFEFGFPMGPFAMSDLAGNDVGWRIRKAQAAERPSNQRYSGTLADRICERGRFGQKTGAG 570

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISV-TEKEIVEMILFPVVNESCRVL 478
            Y Y+ G  P PDP +  +I     L+     G    V +++EI+E  L+P+VNE  ++L
Sbjct: 571 WYRYKDGRTPLPDPDIEALI-----LATSQELGMSRRVISDQEILERCLYPLVNEGAKIL 625

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           +EGI +RASD+D   + G  FP YRGG +FWAD VG + +  +++++   +G++  P+  
Sbjct: 626 DEGIALRASDVDVVWMQGYGFPRYRGGPMFWADTVGLDVIAAAMRRFQAEHGDWMAPAPL 685

Query: 539 LEERATKG 546
           LE  A +G
Sbjct: 686 LERLADEG 693


>gi|410628150|ref|ZP_11338879.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
 gi|410152372|dbj|GAC25648.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola mesophila KMM 241]
          Length = 702

 Score =  317 bits (811), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 275/492 (55%), Gaps = 18/492 (3%)

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+    R   KK A      + C+  +E  +      G+++E ++F E +    +R   H
Sbjct: 212 ELFAQYRQGLKKQARGFFAPERCIQAVEASVSLPFEQGLVREGELFMECMGSKEARAQQH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
            FFA+RA + V +  D     R ++KV +IG G MG GIA       I V++ E+  E L
Sbjct: 272 FFFAERAAAHVSDY-DKSTPTRDIKKVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEAL 330

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            KG+  I  N      +GKLTQ      + +L+G  +Y+   DVD+VIEAV E + +K++
Sbjct: 331 DKGLALIRKNYENSAKKGKLTQQAVEERMALLQGSTEYAALSDVDLVIEAVFEKMSVKKE 390

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F  L+K C    ILA+NTST+D+N +   TS  + +IG HFFSPA+VM LLE+V+ E+T
Sbjct: 391 VFGALDKVCKKGAILASNTSTLDVNEIAASTSRPEDVIGLHFFSPANVMKLLEVVKAEKT 450

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           SA VI   M + K I KV V+VG C GF  NR   PY + A  L+  G    +ID  I  
Sbjct: 451 SADVIKTCMQMAKKINKVAVLVGVCFGFVGNRMIEPYGREAARLMLEGATPQQIDKVIYD 510

Query: 364 FGLPIGPFQLLDLAGYGVA---AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           FGLP+GPF + D+AG  +      + +EF    P     S   D L+K GR G  +G+G 
Sbjct: 511 FGLPMGPFTMGDMAGLDIGFYVRESRREFIAHDPSYCVVS---DRLVKQGRVGLKSGRGA 567

Query: 421 YTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE G++ P PDP V+ +  EE  RL     G     ++++EI+E I+FP++NE   +L
Sbjct: 568 YMYEPGNRMPIPDPEVVEMAKEEAARL-----GIAQRDISDQEILERIIFPLINEGALIL 622

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW----SQLYGNFFK 534
           EEGI  ++SD+D   V G  FP YRGG + +AD +G   VY ++ K+     +  G++F+
Sbjct: 623 EEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEIGLKKVYDAMCKYRDELGEYGGHWFE 682

Query: 535 PSRFLEERATKG 546
           P+  L++ A +G
Sbjct: 683 PAPLLKQLAEQG 694


>gi|254252171|ref|ZP_04945489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124894780|gb|EAY68660.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 694

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/527 (35%), Positives = 285/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL D +   + LL  +  +A  + AR  P  R     D+     
Sbjct: 152 MIVSGTPVPSEQLADSGLFDDIAGGD-LLDAALAFARKVGARPGPHPRV---RDRKIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  APN P    C+D IE G++HG   G   E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSVKAAAPNFPAPHRCIDAIEAGVLHGFDKGSAAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           + H FFA+RA SK+P+V  D  +  R +R+V VIG G MG GIA   +   + V L E  
Sbjct: 268 MRHAFFAERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLETT 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKLT D+ +  + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVAKGKLTHDQRDARIALIAPTLSYDDLKDADLIVEAVFEELD 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKERVFRRLDEVAKPGAILASNTSTLDVNRIASFTKRPHDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+   +  +M V K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GAQTAKDALATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E  R  +   G    ++ + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYAPGER-RARPSAL--VDEMVRAYSNERGIARRTIGDDEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 ERIASKASDIDMVYLTGYGFPIWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|161524541|ref|YP_001579553.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
           17616]
 gi|189350703|ref|YP_001946331.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
           17616]
 gi|160341970|gb|ABX15056.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
           multivorans ATCC 17616]
 gi|189334725|dbj|BAG43795.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
           17616]
          Length = 694

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 190/527 (36%), Positives = 287/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  + GL D +   + LL  +  +A    A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGD-LLDAAVAFARKAGAQPGPHPRV---RDRKIDHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  APN P  + C+D IE G++HG   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSVKAAAPNFPAPRKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKLTQ+K    + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYAPGDR-RARPSAL--VDEMVVAYSKERGIERRKIADDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|221198195|ref|ZP_03571241.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
 gi|221208312|ref|ZP_03581315.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221171725|gb|EEE04169.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia multivorans
           CGD2]
 gi|221182127|gb|EEE14528.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia multivorans
           CGD2M]
          Length = 694

 Score =  316 bits (809), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 189/528 (35%), Positives = 286/528 (54%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  + GL D +   + LL  +  +A    A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGD-LLDAAVAFARKAGAQPGPHPRV---RDRKIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  APN P    C+D IE G++HG   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K    + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDVKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  +++     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYAPGER-KAKPSKL--VDDMIVAFSAEQGAARRQIGDDEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYAQ 669


>gi|421476901|ref|ZP_15924758.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           multivorans CF2]
 gi|400227466|gb|EJO57466.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           multivorans CF2]
          Length = 694

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 190/527 (36%), Positives = 286/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  + GL D +   + LL  +  +A    A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGD-LLDAAVAFARKAGAQPGPHPRV---RDRKIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  APN P    C+D IE G++HG   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKLTQ+K    + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYAPGDR-RARPSAL--VDEMVVAYSKERGIERRKIADDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|221215077|ref|ZP_03588044.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
 gi|221165013|gb|EED97492.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia multivorans
           CGD1]
          Length = 694

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 190/527 (36%), Positives = 286/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  + GL D +   + LL  +  +A    A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGD-LLDAAVAFARKAGAQPGPHPRV---RDRKIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  APN P    C+D IE G++HG   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKLTQ+K    + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYAPGDR-RARPSAL--VDEMVVAYSKERGIERRKIADDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|319763962|ref|YP_004127899.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
 gi|330823774|ref|YP_004387077.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
 gi|317118523|gb|ADV01012.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
           denitrificans BC]
 gi|329309146|gb|AEB83561.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
          Length = 702

 Score =  315 bits (807), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 200/551 (36%), Positives = 308/551 (55%), Gaps = 19/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD---KLG 57
           M++   S+T++E  KLGL+D V  ++ELL  +  +A  ++AR +  + S  +     + G
Sbjct: 153 MIVEGNSVTADEALKLGLVDEV-AAQELLPAALAFAARMSARSEHPVASRRQAQAPAEAG 211

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
                R+ L        K+   +P    CL  +E  +      G+  E + F  LV    
Sbjct: 212 WFDAQRDKLH-------KSKRGLPAPLECLACVEAAVNLPFDEGMKFERERFDVLVNGTE 264

Query: 118 SRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
           S+ L H+F A+RA +K+  +  D  + P  VR VAVIG G MG GIA +     I V+L 
Sbjct: 265 SKALRHLFLAERAAAKIAGLAADTPVIP--VRSVAVIGAGTMGGGIAMSFANAGIPVMLI 322

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E   E L +G+ TI  N  G V +GKL +++A+  L  +   L++    D D+VIEAV E
Sbjct: 323 EAAQEALDRGMATIAKNYDGTVAKGKLAREEADARLARITPTLEFERVADADLVIEAVFE 382

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
           S+ +K+++F +L+  C    ILATNTS +D+N +   T+    +IG HFFSPA+VM L+E
Sbjct: 383 SMEVKKELFRKLDALCKADAILATNTSRLDVNEIAATTARPASVIGLHFFSPANVMRLVE 442

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +VR + T+  VI   M V + I K+PV+VG C GF  NR    Y++ A  L+  G    +
Sbjct: 443 VVRGQATAPSVIASSMAVSRQIGKLPVLVGVCDGFVGNRMVGQYAREAEFLLEEGASPQQ 502

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +D+A++ FGL +G F + DLAG  ++ A+ K      P     S + D L + GR G+  
Sbjct: 503 VDAALQKFGLAMGRFAMSDLAGLDISWASRKRAAPTRPAHLRYSKVADRLCEMGRFGQKT 562

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G G Y YE GS+ P PDP V  +IE+C R + I    +   + + +IVE  ++ +VNE  
Sbjct: 563 GAGFYRYEAGSRTPIPDPIVQQVIEDCAREAGI----ERRVIDDAQIVERCIYALVNEGA 618

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           +VL+EGI  R+SD+D   V G  FP++RGG +F+AD VG + VY  +  + + +G F+ P
Sbjct: 619 KVLQEGIAQRSSDIDLIYVNGYGFPAWRGGPMFYADTVGVDKVYQRICDFHEKHGAFWTP 678

Query: 536 SRFLEERATKG 546
           +  L++ A +G
Sbjct: 679 APLLKKLANEG 689


>gi|407695494|ref|YP_006820282.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
 gi|407252832|gb|AFT69939.1| 3-hydroxyacyl-CoA dehydrogenase [Alcanivorax dieselolei B5]
          Length = 694

 Score =  315 bits (806), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 195/550 (35%), Positives = 299/550 (54%), Gaps = 16/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW--IRSLHRTDKLGS 58
           M++    + ++   ++G++D VV+ + LL+ +  +A  + A + P   IR L    +   
Sbjct: 152 MIVGGNPVKAKNALQMGIVDDVVSGD-LLEGALAYARKLVADKAPLRRIRDLDVQTEEAD 210

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  + E   +AR Q    AP       C+  ++  +      G+ +E ++F EL++   S
Sbjct: 211 LFASYE-KSIARKQRGFKAPFH-----CIKAVQAAVELPFEEGMKRERELFGELLVSSES 264

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
               HVFFA+R  +KVP +     K R V  VAVIG G MG GIA       I V + EV
Sbjct: 265 AAQRHVFFAEREVAKVPGLPKDTPK-REVNSVAVIGAGTMGGGIAMNFANAGIPVKILEV 323

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E L KGI  I  N      +G+LTQ++    + +++  L Y +  DVD+VIEAV E++
Sbjct: 324 KEEALEKGIAIIRKNYENTAKKGRLTQEQVEQRMALIQPTLSYDDLGDVDVVIEAVFENM 383

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ +F+EL++ C P  ILATNTST+D+N +   T     +IG HFFSPA+VM LLE V
Sbjct: 384 SVKEAVFNELDRVCKPGAILATNTSTLDVNRIASFTKRPQDVIGMHFFSPANVMKLLENV 443

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+T+  VI  +M + + I KV V+VG C GF  NR        A  LV+ G +  ++D
Sbjct: 444 RGEKTADDVIATVMDLSRRIGKVGVLVGVCHGFVGNRMLHKRQAEAVQLVNEGANPAQVD 503

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
             +   G P+GPF + DLAG  V     +E  K  P+ +      D L+++GR G+    
Sbjct: 504 KVLFDLGFPMGPFAMSDLAGMDVGYRIREELRKENPENAPARNWTDELVENGRMGQKTQA 563

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G++ Y++G + P P   V  II + R  + I        VT++EI+E  ++ +VNE  ++
Sbjct: 564 GVFDYKEGDRTPVPSAEVDKIIAKFREENGIA----TREVTDQEILERCMYVMVNEGAKI 619

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPS 536
           LEEGI  R  D+D   + G  FP YRGG++FWAD VG   +Y  + ++ Q  G + +KP+
Sbjct: 620 LEEGIAARPLDVDVIWIYGYGFPVYRGGVLFWADQVGLKAIYDKVSQFHQETGDDVWKPA 679

Query: 537 RFLEERATKG 546
             LE+ A +G
Sbjct: 680 PLLEKLAKEG 689


>gi|408373582|ref|ZP_11171277.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
           A-11-3]
 gi|407766509|gb|EKF74951.1| fatty oxidation complex alpha subunit [Alcanivorax hongdengensis
           A-11-3]
          Length = 696

 Score =  315 bits (806), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 191/550 (34%), Positives = 301/550 (54%), Gaps = 17/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEEL---LKVSRLWALDIAARRKPWIRSLHRTDKLG 57
           M++  K + + +  +LGL+D VV+ + L   L  +R    D A RR+  IR +      G
Sbjct: 152 MIVGGKPVKAAQARELGLVDDVVSGDLLDGALAFTRRLLADRAPRRR--IREMDVPGDTG 209

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           +   +     +AR Q    AP      +C+  ++  +      G+ +E ++F +L++   
Sbjct: 210 AELFSEFEQSIARKQRGFKAPF-----SCIKAVQAAVELPFDQGIERERELFFKLLISPE 264

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           S    HVFFA+R  +KVP + D     R ++ VAVIG G MG GIA       I V L E
Sbjct: 265 SAAQRHVFFAEREVAKVPGL-DKTTPKRDIQTVAVIGAGTMGGGIAMNFANAGIPVKLLE 323

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V  + L KG+  I  N +    +G+++ ++    + +++  L Y E  DVD+VIEAV E+
Sbjct: 324 VKQDALDKGLAIIRRNYQNTAKKGRISAEQVEQRMALIQPTLSYDELGDVDLVIEAVFEN 383

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ +F+EL++ C P  ILATNTST+D+N +   T     ++G HFFSPA+VM LLE 
Sbjct: 384 MDVKKAVFTELDRVCKPGAILATNTSTLDVNRIAAFTGRPQDVMGMHFFSPANVMRLLEN 443

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR ++T+  VI  +M + + I KV V+VG C GF  NR        A  LV+ G    ++
Sbjct: 444 VRGDKTADDVIATVMDLSRRIGKVGVLVGVCHGFVGNRMLHKRQAEAVQLVNEGASPQQV 503

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D  +   G P+GPF + DLAG  V     +E  K  PD +      D L+++GR G+   
Sbjct: 504 DKVLFDLGFPMGPFAMSDLAGMDVGYRIREELRKDDPDNAPPRNWTDELVEAGRLGQKTR 563

Query: 418 KGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
            G++ Y++G + P P P V  IIE+ RR + I     P  ++++EI+E  ++ +VNE  +
Sbjct: 564 AGVFDYQEGDRTPIPSPDVDAIIEKYRRDNGIT----PRHISDQEILERCMYVMVNEGAK 619

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKP 535
           +LEEGI  R  D+D   + G  FP YRGG++FWAD VG   ++  + +  Q  G + +KP
Sbjct: 620 ILEEGIAARPLDVDVIWIYGYGFPVYRGGVLFWADQVGVKTIFDKVNEIYQQTGSDVWKP 679

Query: 536 SRFLEERATK 545
           ++ L + A +
Sbjct: 680 AQLLTDLAEQ 689


>gi|410632204|ref|ZP_11342868.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
 gi|410148204|dbj|GAC19735.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
          Length = 710

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 194/538 (36%), Positives = 292/538 (54%), Gaps = 17/538 (3%)

Query: 17  GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 76
           G+ D VV S E L  S L   +        +R      ++   +  +E+    R      
Sbjct: 176 GVFDVVVDSPETLLSSALAFCEKVVAEGSKVRKTCDV-QIDVSTAPKELFAQYRKGLATQ 234

Query: 77  APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 136
           A      + C+  +E  +      G+++E ++F E +    +R   H FFA+RA S V +
Sbjct: 235 ARGFFAPERCIQAVEASVELPFAEGLVREGELFMECMRSKEARAQQHFFFAERAASHVKD 294

Query: 137 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 196
             D     R ++ V +IG G MG GIA       I V++ E+  E L KG+  I  N   
Sbjct: 295 F-DKETPVRDIKTVGIIGAGTMGGGIAMNFANAGIPVIMLELKQEALDKGLALIRKNYEN 353

Query: 197 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 256
              +GKLT ++  + + +L G  +Y+   DVD+VIEAV E + +KQ++F  L+  C P  
Sbjct: 354 SAKKGKLTAEQVEDRMALLTGSTEYAALSDVDLVIEAVFEKMSVKQEVFKALDAVCKPGA 413

Query: 257 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 316
           ILA+NTST+D++ +GE T   + +IG HFFSPA+VM LLE+V+T +TS +VI   M + K
Sbjct: 414 ILASNTSTLDIDEIGEATKRPEDVIGLHFFSPANVMKLLEVVKTSKTSPEVIKTAMKMAK 473

Query: 317 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 376
            I KV V+VG C GF  NR    Y + A  ++  G     ID  I  FGLP+GPF + D+
Sbjct: 474 KINKVAVLVGVCFGFVGNRMIEGYGREANRMMLEGGTPEHIDKVIYDFGLPMGPFTMGDM 533

Query: 377 AGYGVAA---ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPD 432
           AG  + A    + +EF K  P       L D L++ GR G   GKG+Y YE G+ KP PD
Sbjct: 534 AGQDIGAFVRESRREFIKHDPTYCI---LADKLVEQGRVGLKAGKGVYLYEAGNRKPIPD 590

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
           PSVL   E  ++++  + G     ++++EI+E I+FP++NE   +LEEGI  ++SD+D  
Sbjct: 591 PSVL---ELAKQVAADL-GVAQRDISDQEIIERIIFPMINEGALILEEGIAAKSSDIDVI 646

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG----NFFKPSRFLEERATKG 546
            V G  FP YRGG + +AD +G   VY ++ K+    G    N+F+P+  L++ A +G
Sbjct: 647 YVYGYGFPVYRGGPMQYADEIGLKTVYDAMCKYRDELGEHGKNWFEPAPLLKKLAEQG 704


>gi|392423205|ref|YP_006459809.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
 gi|390985393|gb|AFM35386.1| enoyl-CoA hydratase [Pseudomonas stutzeri CCUG 29243]
          Length = 701

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 174/501 (34%), Positives = 284/501 (56%), Gaps = 9/501 (1%)

Query: 48  RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAK 107
           R+  +T  L S ++   +++    +  K  P +     C+  +E         G+ +E +
Sbjct: 198 RTGEQTRGLDS-ADNEALIRAKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKRERE 256

Query: 108 VFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAH 166
           +F E +       LVH FF++R   K+ ++ +D+  KPR ++  AVIGGG MG GI  + 
Sbjct: 257 LFAECLNSPQRGALVHSFFSERQAGKINDLPSDV--KPRSIKTAAVIGGGTMGVGITLSF 314

Query: 167 ILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226
               + V L E+N E L +G++         V RG LT++     L +++GV +Y+   D
Sbjct: 315 ANAGVPVKLLEINDESLQRGLQRARDTYAASVKRGSLTEEAMEQRLALVEGVTEYAALAD 374

Query: 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFF 286
            D+V+EAV E + +KQ++F +L+  C P  ILA+NTS++DL+ +   T   + ++G HFF
Sbjct: 375 ADVVVEAVFEEMGVKQQVFEQLDAVCKPGAILASNTSSLDLDAIAAFTKRPEDVVGLHFF 434

Query: 287 SPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARL 346
           SPA+VM LLE+VR E+TS +V+   M +GK +KKV VVVG C GF  NR  F Y + A  
Sbjct: 435 SPANVMRLLEVVRGEKTSDEVLATAMAIGKQLKKVSVVVGVCDGFVGNRMVFQYGREAEF 494

Query: 347 LVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL 406
           L+  G    ++D+A+R+FG+ +GPF + DL+G  +  A  K      P       + D L
Sbjct: 495 LLEEGATPQQVDAALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKL 554

Query: 407 LKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEM 465
             +G  G+  G G Y YE G++ P+ +P + P++E   +   I    +  ++ E+ IVE 
Sbjct: 555 CAAGMLGQKTGAGYYRYEPGNRTPQENPDLAPMLEAASQEKGI----ERQTLDEQYIVER 610

Query: 466 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 525
            +F +VNE  ++LEEGI  R+SD+D   + G  FP++RGG +F+AD+VG + V   +++ 
Sbjct: 611 CIFALVNEGAQILEEGIAQRSSDIDVIYLNGYGFPAFRGGPMFYADSVGLDRVLARVREL 670

Query: 526 SQLYGNFFKPSRFLEERATKG 546
               G+++KP+  LE+ A +G
Sbjct: 671 HARCGDWWKPAPLLEKLAAEG 691


>gi|78066676|ref|YP_369445.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77967421|gb|ABB08801.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia sp. 383]
          Length = 694

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 188/527 (35%), Positives = 289/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +   + LL  +  +A  + A++ P  R     D+    +
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHA 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G++HG   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLHGFDKGSVAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  L  R +R+V VIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALERGVATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++      ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKKLDEVAKAGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYIEQPDLQY-SKIADHLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F + NE  ++LE
Sbjct: 565 WYDYVPGDR-KAKPSSL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALANEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +ADAVG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADAVGLYNVERAIRRYA 668


>gi|410612368|ref|ZP_11323447.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
 gi|410168108|dbj|GAC37336.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
          Length = 714

 Score =  314 bits (805), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 195/538 (36%), Positives = 292/538 (54%), Gaps = 17/538 (3%)

Query: 17  GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 76
           G+ D VV S E L  S L   +        +R      K+   S  +E+    R      
Sbjct: 180 GVFDVVVDSPETLLTSALAFCEKVIADGSKVRKTCDV-KIDVSSAPKELFAQYRQGLATK 238

Query: 77  APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 136
           A      + C+  +E  +      G+++E ++F E +    +R   H FFA+RA S V +
Sbjct: 239 ARGFFAPERCIQAVEASVELPFAQGLIREGELFMECMRSKEARAQQHFFFAERAASHVKD 298

Query: 137 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 196
             D     R +++V +IG G MG GIA       I V++ E+  + L KG+  I  N   
Sbjct: 299 F-DKETPVRDIKQVGIIGAGTMGGGIAMNFANAGIPVIMLELKQDALDKGLALIRKNYEN 357

Query: 197 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 256
              +GKLT  +  + + +L G  +Y+   +VD+VIEAV E + +KQ++F  L+  C P  
Sbjct: 358 SAKKGKLTAQQVEDRMGLLTGSTEYAALCNVDLVIEAVFEKMSVKQEVFKALDAVCKPGA 417

Query: 257 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 316
           ILA+NTST+D++ +GE T   + +IG HFFSPA+VM LLE+V+T +TS +VI   M + K
Sbjct: 418 ILASNTSTLDIDEIGEATKRPEDVIGLHFFSPANVMKLLEVVKTSKTSPEVIKTTMKMAK 477

Query: 317 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 376
            I KV V+VG C GF  NR    Y + A  ++  G     ID  I  FGLP+GPF + D+
Sbjct: 478 KINKVAVLVGVCFGFVGNRMIEGYGREANRMMLEGGTPEHIDKVIYDFGLPMGPFTMGDM 537

Query: 377 AGYGVAA---ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPD 432
           AG  + A    + +EF K  P       L D L++ GR G   GKG+Y YE GS KP PD
Sbjct: 538 AGQDIGAFVRESRREFIKHDPSYCI---LADKLVEQGRVGLKVGKGVYLYEAGSRKPIPD 594

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
           PSVL   E  ++++  + G     ++++EI+E I+FP++NE   +LEEGI  ++SD+D  
Sbjct: 595 PSVL---ELAKQVAADL-GVAQRDISDQEIIERIIFPMINEGALILEEGIAAKSSDIDVI 650

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG----NFFKPSRFLEERATKG 546
            V G  FP YRGG + +AD +G   VY ++ K+    G    N+F+P+  L++ A +G
Sbjct: 651 YVYGYGFPVYRGGPMQYADEIGLKTVYDAMCKYRDELGEHGKNWFEPAPLLKKLAEQG 708


>gi|170733265|ref|YP_001765212.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
 gi|169816507|gb|ACA91090.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
           cenocepacia MC0-3]
          Length = 694

 Score =  314 bits (805), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 190/527 (36%), Positives = 289/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +   + LL  +  +A  + A++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  L  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  L ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARLALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLQY-SKIADRLCEKGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVPGDR-KAKPSSL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYA 668


>gi|407699845|ref|YP_006824632.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
           Sea 11']
 gi|407248992|gb|AFT78177.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Black
           Sea 11']
          Length = 707

 Score =  314 bits (805), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 181/493 (36%), Positives = 263/493 (53%), Gaps = 11/493 (2%)

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
            E + V      Q KK A        C++ +          G+  E K+F E +    +R
Sbjct: 211 DETQAVFDAVTAQTKKAARGFFAPLKCIEAVRGAYTLAFEDGLKNEGKLFMECMNTPQAR 270

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              H FFA+RA   V +  D     R + KVA+IG G MG GIA       I V + E+ 
Sbjct: 271 AQQHFFFAERAAGHVSDF-DKNTPERNIEKVAIIGAGTMGGGIAMNFANAGIPVTMLELK 329

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L KG+  I  N      +GKLTQ++  + + +L G   Y +  DVD+VIEAV E + 
Sbjct: 330 EEALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLADVDLVIEAVFEKME 389

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +FS L+K C P  ILA+NTST+D++ +   TS  + +IG HFFSPA+VM LLE+V+
Sbjct: 390 VKKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHFFSPANVMRLLEVVK 449

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+TSA+VI   M + K IKKV V+VG C GF  NR   PY + A  LV  G    ++D 
Sbjct: 450 AEKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREANRLVLEGATPEQVDR 509

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG+P+GPF + D+AG  +     +   +          + D L++ GRNG   G+G
Sbjct: 510 VLTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADRLVEKGRNGLKAGRG 569

Query: 420 LYTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           +Y YE GS+ P PDP VL I  +E  RL  +    +   ++++EI+  +++ ++NE   +
Sbjct: 570 VYNYEPGSRVPIPDPEVLEIAKQEAERLGVV----QRSDISDEEILVRVMYSLINEGAAI 625

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK--- 534
           LEEGI  ++SD+D   V G  FP YRGG + +AD VG   +   L  +    G + K   
Sbjct: 626 LEEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLTTYRDQLGEYGKMWL 685

Query: 535 -PSRFLEERATKG 546
            PS  L + A  G
Sbjct: 686 EPSDLLVKLAQSG 698


>gi|410635272|ref|ZP_11345887.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
 gi|410145245|dbj|GAC13092.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola lipolytica E3]
          Length = 706

 Score =  314 bits (804), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 182/489 (37%), Positives = 271/489 (55%), Gaps = 12/489 (2%)

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+    R    K A      + C+  +E  +      G+ KEA++F E +    +R   H
Sbjct: 216 ELFSQYRQGIAKQARGFFSPERCIQAVEAAVTLPLKDGLQKEAELFMECMRSPQARAQQH 275

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
            FFA++A   V +  D     R ++ V +IG G MG GIA       I VV+ E+ +E L
Sbjct: 276 FFFAEKAAGHVSDY-DKSTPVRDIKSVGIIGAGTMGGGIAMNFANAGIPVVMLELKAEAL 334

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            KG+  I  N      +GKL+Q    + + +L G  +YS   DVD+VIEAV E + +K++
Sbjct: 335 EKGLGVIRRNYENSAKKGKLSQQDLEDRMALLHGTTEYSGLADVDLVIEAVFEKMDVKKQ 394

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F++L+  C    ILA+NTST+D+N + + TS  + +IG HFFSPA+VM LLE+V+ E+T
Sbjct: 395 VFTQLDAICKKGAILASNTSTLDINEIADCTSRPEDVIGLHFFSPANVMKLLEVVKGEKT 454

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           SA VI   M + K I+KV V+VG C GF  NR   PY + A  ++  G D   +D  I  
Sbjct: 455 SADVIKTSMQLAKKIRKVAVLVGVCFGFVGNRMIEPYGREANRMMLEGADPEHVDRVIYD 514

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 423
           FGLP+GPF + D+AG  +     +   +        + + D L+K GR G   GKG+Y Y
Sbjct: 515 FGLPMGPFTMGDMAGLDIGYFVRQSRKEHIAHDPSYAVVADRLVKDGRAGLKVGKGVYLY 574

Query: 424 EKGS-KPKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
           E G+ KP PDP+V  I  EE  +L     G KP   +++EI+E  +F ++NE   +LEEG
Sbjct: 575 EAGNRKPIPDPTVAQIAKEEAEKL-----GVKPRKHSDEEILERCIFTLINEGAHILEEG 629

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSR 537
           I  ++SD+D   V G  FP +RGG + +AD VG + VY ++ K+    G +    F+P+ 
Sbjct: 630 IAAKSSDIDVIYVYGYGFPVFRGGPMQYADEVGLDKVYAAMCKYRDELGEYGKAWFEPAP 689

Query: 538 FLEERATKG 546
            L+  A +G
Sbjct: 690 LLKRLAEQG 698


>gi|416997008|ref|ZP_11939200.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
           TJI49]
 gi|325518003|gb|EGC97818.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia sp.
           TJI49]
          Length = 694

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 192/527 (36%), Positives = 290/527 (55%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +V  E LL  +  +A  + A  +P +    R  K+    
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEMVDGE-LLDAAVAFARKVGA--QPGLHPRVRDRKI-VHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  AK  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSAKAAAPNFPAPHKCIDAIEAGVLNGFDKGSIAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  L  R +R+VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  + ++   L Y + KD D++IEAV E + 
Sbjct: 326 QDALDRGLATIRKNYDAQVKKGKLTQEKLDARMALIAPTLSYDDLKDADLIIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++L 
Sbjct: 565 WYDYVPGDR-KARPSAL--VDEMVVAYSQERGIERRRIGDDEIVERLVFALVNEGAKILA 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|399546209|ref|YP_006559517.1| peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
 gi|399161541|gb|AFP32104.1| Peroxisomal bifunctional enzyme [Marinobacter sp. BSs20148]
          Length = 697

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 190/541 (35%), Positives = 291/541 (53%), Gaps = 10/541 (1%)

Query: 8   ITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 67
           + +++   LG++D V   E++      +A  IA   KP  R     DK+ +  +  +V  
Sbjct: 159 VGAKDALALGILDVVDDGEDVKAAGLAYAQQIADEGKPVRRVCDLKDKIAA-DKGSDVFD 217

Query: 68  LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 127
             R   +K A        C+D IE         G+ +E ++F E +      G +H FFA
Sbjct: 218 QFRAVLQKKARGQFSPFKCVDAIEAAFDLPFAEGMKRERELFTECMDSPQRAGQIHSFFA 277

Query: 128 QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187
           +R  SKV  ++      R V  V +IG G MG GIA       I V++ E+  E L KG+
Sbjct: 278 EREVSKVKGLSK-DTPVRDVNSVGIIGAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGL 336

Query: 188 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 247
             I  N      +G+LTQ +  + + ++ G L Y +FK VD+VIEAV E++ +K++IF++
Sbjct: 337 GIIRKNYENSAKKGRLTQQQVEDRIALITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAK 396

Query: 248 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 307
           L+  C P  ILA+NTST+D++ +   T   + ++G HFFSPA+VM LLE VR  +TS +V
Sbjct: 397 LDAICKPGTILASNTSTLDVDEIASATRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEV 456

Query: 308 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
              +M V K IKKV V+VGNC GF  NR        A  LV+ G    ++D  +   G P
Sbjct: 457 KATVMAVAKKIKKVGVLVGNCHGFVGNRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYP 516

Query: 368 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS 427
           +G F + DLAG  V     +E   A          +D L +  R G+    G+Y YE+GS
Sbjct: 517 MGQFAMSDLAGIDVGYRIREERRNA--GEQVAPSWMDKLAEQNRLGQKTMAGVYKYEEGS 574

Query: 428 K-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 486
           + P PDP V  IIE+ R+  +I        +T++EI+E  ++ +VNE+ ++LEEGI  RA
Sbjct: 575 RNPVPDPEVERIIEDFRKEQDI----SSREITDQEILERCMYVMVNEAAKILEEGIADRA 630

Query: 487 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATK 545
            D+D   + G  FP+YRGG +FWAD VG + +  +++K+ + + G  +KP+  L++    
Sbjct: 631 LDIDVVWIYGYGFPAYRGGPMFWADQVGLDVILAAVEKYHADVGGEQWKPADLLKQLVAD 690

Query: 546 G 546
           G
Sbjct: 691 G 691


>gi|388568321|ref|ZP_10154741.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
 gi|388264521|gb|EIK90091.1| 3-hydroxyacyl-CoA dehydrogenase [Hydrogenophaga sp. PBC]
          Length = 704

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/539 (35%), Positives = 291/539 (53%), Gaps = 21/539 (3%)

Query: 18  LIDAVVTS-EELLKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARL 71
           L D + +S E+L + +  +A ++AA+       P +R+L    K G         + AR 
Sbjct: 172 LFDKMASSPEKLAEEAIAFAKEVAAKHADGSPLPLVRNLPCKHKDGD-----AYFQFARN 226

Query: 72  QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131
             K  A N P    C+D +E         G+L E ++F  L+     R L H+F A+RA 
Sbjct: 227 MVKGMAKNFPAPAKCVDAVEAATKQKFDQGMLTEREMFINLMWTPECRALRHLFMAERAA 286

Query: 132 SKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 191
           SK+P+V +     R + KVAVIG G MG GI+   +   I V + E+  E L +G+  + 
Sbjct: 287 SKIPDVPE-DTPQRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGVGVMR 345

Query: 192 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 251
            N    V +GKL QDK +  + +LK  ++Y + KD D+VIEAV E + +K+ +F +L++ 
Sbjct: 346 GNYEAQVKKGKLKQDKLDARMGLLKTTVNYEDIKDADLVIEAVFEEIGVKEAVFKKLDEV 405

Query: 252 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 311
             P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR E+T+  V+  +
Sbjct: 406 MKPGAILASNTSTLDVNKIASFTKRPQDVVGLHFFSPANVMKLLEVVRGEKTAKDVMATV 465

Query: 312 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 371
           M V K IKK  VV G C GF  NR    Y +    L+  G    ++D AI  FG  +GPF
Sbjct: 466 MAVAKKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDRAIEKFGFAMGPF 525

Query: 372 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK- 430
           ++ DLAG  +  A  K      PD  + S   DLL + GR G+  GKG Y Y  G +   
Sbjct: 526 RMGDLAGNDIGWAIRKRRYTEKPDMKY-SKTADLLCEKGRFGQKVGKGWYDYVPGKRDAI 584

Query: 431 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 490
           P+  V  +I E R+   I     P  ++++EIV+ ++F +VNE+  +LEEGI  +ASD+D
Sbjct: 585 PNAEVEQMIVEHRKALGIT----PRKISDEEIVQRLVFSLVNEAAHILEEGIANKASDID 640

Query: 491 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
              + G  FP +RGG + +AD VG   V  ++K++ +       F++P+  ++    +G
Sbjct: 641 VVYIFGYGFPVHRGGPLKYADEVGLFNVAQAMKRFQKNPLDDAKFWEPAPLIQRLVAEG 699


>gi|172060871|ref|YP_001808523.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
 gi|171993388|gb|ACB64307.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           MC40-6]
          Length = 694

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 195/553 (35%), Positives = 297/553 (53%), Gaps = 22/553 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL DA+   + LL  +  +A  + A++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLANSGLFDAMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSIAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALDRGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLHY-SKMADRLCELGRFGQKTGGG 564

Query: 420 LYTYEKGS-KPKP----DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            Y Y  G  K KP    D  V+   +EC        G +   + + EIVE ++F +VNE 
Sbjct: 565 WYDYVPGDRKAKPSALVDEMVVAYSKEC--------GIERRKIGDDEIVERLVFALVNEG 616

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL-YGNFF 533
            ++LEE I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++    G+ +
Sbjct: 617 AKILEEKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYAAAPNGDAW 676

Query: 534 KPSRFLEERATKG 546
           + +  + ERA  G
Sbjct: 677 QLAPSIVERAAAG 689


>gi|375105594|ref|ZP_09751855.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
           JOSHI_001]
 gi|374666325|gb|EHR71110.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
           JOSHI_001]
          Length = 698

 Score =  313 bits (802), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 195/547 (35%), Positives = 298/547 (54%), Gaps = 20/547 (3%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAR 63
           S+ + ++ G KL  ID V+  + LL  +  +A+D+A RR  P +RSL    KL S     
Sbjct: 161 SELLAAQPGQKL--IDKVIDGD-LLAGAIAFAVDVADRRPLPLVRSL----KL-SHPNPD 212

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLV 122
             ++ AR   K  A N P    C+D +E+ +    +  G+  E   F  L++   S+ L 
Sbjct: 213 AYIQFARNTVKAMAKNFPAPAKCVDCVEQALKAPNFEEGMRFELATFMGLMLTPESKALR 272

Query: 123 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           H FF +RA SK+P+V +     R + KVAVIG G MG GI+   +   I V + E+  + 
Sbjct: 273 HAFFGERAASKIPDVPE-STPQRAIAKVAVIGAGTMGGGISMNFLNAGIPVTMLEMKQDA 331

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L +G+ TI  N    V +GKL  DK    + +L   L Y E KD D+VIEAV E + +K+
Sbjct: 332 LDRGVATIRKNYEAQVKKGKLKDDKYQQRMALLTTTLSYDEIKDADLVIEAVFEEIGVKE 391

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
           K+F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR  +
Sbjct: 392 KVFKALDEVMKPGAILASNTSTLDVDKIASFTQRPQDVVGLHFFSPANVMKLLEVVRGAK 451

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           T+  V+  +M V K I+K  VV G C GF  NR    YS+ A  L+  G    ++D AI 
Sbjct: 452 TAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGASPAQVDKAIE 511

Query: 363 SFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 422
            FG  +GPF++ DLAG  +  A  K      P+  + S   DLL + GR G+  G G Y 
Sbjct: 512 RFGFAMGPFRMGDLAGNDIGWAIRKRRYVEQPNLRY-SKTADLLCEMGRYGQKTGAGWYD 570

Query: 423 YEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
           Y+ G +   P  +V  ++E+ R+   I     P  +++ EIV  +++ +VNE  ++LEEG
Sbjct: 571 YQPGKRDAIPSEAVNKMVEDHRKALGIT----PRKISDDEIVHRLVYSLVNEGAKILEEG 626

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRF 538
           I  +ASD+D   + G  FP +RGG + +AD  G   V  ++K+++       +F++P+  
Sbjct: 627 IASKASDIDMVYLTGYGFPLHRGGPMCYADTQGLFNVVQAMKRFAANPLDDADFWQPAPL 686

Query: 539 LEERATK 545
           L + A +
Sbjct: 687 LAKLAAE 693


>gi|421473060|ref|ZP_15921207.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           multivorans ATCC BAA-247]
 gi|400221799|gb|EJO52227.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           multivorans ATCC BAA-247]
          Length = 694

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/527 (35%), Positives = 286/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  + GL D +   + LL  +  +A    A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAESGLFDQLADGD-LLDAAVAFARKAGAQPGPHPRV---RDRKIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  APN P    C+D IE G++HG   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSVKAAAPNFPAPHKCIDAIEAGVLHGFDKGSIAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--RDIRRVAVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K    + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLEARMALIAPTLSYDDVKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEQFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYAPGDR-RARPSAL--VDEMVVAYSKERGIERRKIADDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|115351945|ref|YP_773784.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
 gi|115281933|gb|ABI87450.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia ambifaria AMMD]
          Length = 694

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 193/548 (35%), Positives = 297/548 (54%), Gaps = 12/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL DA+   + LL  +  +A  + A++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLANSGLFDAMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLQY-SKIADRLCELGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVPGDR-KAKPSAL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL-YGNFFKPSRF 538
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++    G+ ++ +  
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYAAAPNGDAWQLAPS 681

Query: 539 LEERATKG 546
           + ERA  G
Sbjct: 682 IVERAAAG 689


>gi|89901163|ref|YP_523634.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89345900|gb|ABD70103.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Rhodoferax ferrireducens T118]
          Length = 699

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/535 (35%), Positives = 286/535 (53%), Gaps = 17/535 (3%)

Query: 18  LIDAVVTSEE-LLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L + + TS E L + + L+A  +A  R  P +R+L      G         + AR     
Sbjct: 172 LFNKMATSNESLAEEALLYARSVAETRPLPLVRNLPCKHPQGD-----AYFQFARNMVGG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            + N P    C+DV++         G+L E + F  L+     R L H+F AQRA SK+P
Sbjct: 227 MSKNFPAPLKCVDVVQAATTKKFDDGMLFERESFINLMWTPECRALRHIFMAQRAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V+      R +  VA+IG G MG GI+   +   I V + E+  E L +GI TI  N  
Sbjct: 287 DVS-ADTPQRAINSVAIIGAGTMGGGISMNFLNAGIAVKILEMKQEALDRGIATIRKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL QDK    + +L   L Y + KD DMVIEAV E + +K+ +F EL++   P 
Sbjct: 346 AQVKKGKLKQDKYEQRMSLLSTTLSYDDLKDADMVIEAVFEEIGVKEAVFKELDRVMKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE++R E+T+  V+  +M + 
Sbjct: 406 AILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVIRGEKTAKDVLATVMALA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    Y +    L+  G    ++D A+  FG  +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDKAVEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y  G +   P+  
Sbjct: 526 LAGNDIGWAIRKRRYLEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYVAGKRDAIPNAE 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V+ +IE+ R    I P      ++++EIV+ +++ +VNE+  +LEEGI  +ASD+D   +
Sbjct: 585 VVKMIEDHRAALGITPR----KISDEEIVQRLVYSLVNEAAHILEEGIASKASDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
           +G  FP +RGG + +AD VG   V  ++ ++++       F++P+  L + A +G
Sbjct: 641 MGYGFPIWRGGPMNYADEVGLFNVVQAMHRFAKNPLDDAKFWQPAPLLAKLAAEG 695


>gi|107028915|ref|YP_626010.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Burkholderia
           cenocepacia AU 1054]
 gi|116689927|ref|YP_835550.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia HI2424]
 gi|105898079|gb|ABF81037.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia cenocepacia AU 1054]
 gi|116648016|gb|ABK08657.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia cenocepacia HI2424]
          Length = 694

 Score =  312 bits (800), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/527 (35%), Positives = 289/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +   + LL  +  +A  + A++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNYPALHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  L  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  L ++   L Y + K+ D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARLALITPTLSYDDLKEADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLQY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVPGDR-KAKPSSL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYA 668


>gi|348028986|ref|YP_004871672.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola nitratireducens FR1064]
 gi|347946329|gb|AEP29679.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Glaciecola
           nitratireducens FR1064]
          Length = 704

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 193/540 (35%), Positives = 288/540 (53%), Gaps = 21/540 (3%)

Query: 17  GLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           G+ D +V S +EL   +  +A D+  ++ P  +       + S  EA        + AK 
Sbjct: 169 GVFDLIVDSADELQAAAMAFATDVVEQQMPVKKVCDIELSMTSDIEALFEQYAQGVAAKT 228

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
                P H  C+  ++    H    G+ +E+++F E +    +R   H FFA+RA S V 
Sbjct: 229 KGYFAPGH--CVLAVKAAFTHDFKDGLARESELFMECMKTSQARAQQHFFFAERAASHVQ 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
            +    +  R +++VAVIG G MG GIA       I VV+ E+  + L KG+  I  N  
Sbjct: 287 GIAK-DVVARDIKQVAVIGAGTMGGGIAMNFANAGIPVVMLELKQDALDKGLALIRRNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
               +GKLT ++    + +L G   Y +  +VD+VIEAV E + +K+++F  L+K C P 
Sbjct: 346 NSAKKGKLTTEQVEQRMSLLTGTTSYEDLSNVDLVIEAVFEKMSVKKEVFGMLDKVCKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+DLN +    S    +IG HFFSPA+VM LLEIVR E+T+  VI   M + 
Sbjct: 406 AILASNTSTLDLNEIAASVSRPQDVIGLHFFSPANVMKLLEIVRGEKTADDVIKTAMKLA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K I+KV V+VG C GF  NR   PY + A  L+  G    ++D  I  FGLP+GPF + D
Sbjct: 466 KTIRKVGVLVGVCFGFVGNRMIEPYGREANRLMLEGATPEQVDKVIGKFGLPMGPFTMGD 525

Query: 376 LAGYGVAA---ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKP 431
           +AG  +      + +EF K  P       + D L+  GR G   GKG Y YE+GS+ P P
Sbjct: 526 MAGLDIGYFVRESRREFIKHDPSYCI---VADKLVAQGRVGLKVGKGAYLYEQGSRQPIP 582

Query: 432 DPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 490
           DP V+ I  +E +RL     G +   ++++EI+E  ++P++NE   +L+EGI  ++SD+D
Sbjct: 583 DPEVIEIAKQEAKRL-----GIQQREISDQEILERCIYPLINEGADILKEGIASKSSDID 637

Query: 491 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 546
              V G  FP +RGG + +AD +G   V   L  + +  G +    F PS  L + A  G
Sbjct: 638 VIYVYGYGFPVFRGGPMQYADEIGLAEVRDRLNHYKETLGEYGQHWFTPSSLLNDLADAG 697


>gi|330808852|ref|YP_004353314.1| multifunctional fatty acid oxidation complex [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327376960|gb|AEA68310.1| putative multifunctional fatty acid oxidation complex [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 703

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 190/556 (34%), Positives = 301/556 (54%), Gaps = 19/556 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV---TSEELLKVSRLWALDIAARRKPWIRSL--HRTDK 55
           +++ S+ + + E  K+GLI  +V    S+EL   +  +A  +A  +   +R L     D 
Sbjct: 153 LLVSSRHVQAPEALKIGLISQIVPGTQSQELRDAAVSYAKAVAHAQPQRVRDLVLEPMD- 211

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
               +   +VL+ AR  A K + +    Q  +D IE          +  E+++F EL   
Sbjct: 212 ----ATTMDVLQAARRAAAKKSAHNKAPQYAIDCIEAAFSLPFDEALEVESRLFSELEGS 267

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           D ++ L + FFA+R  +KVP+    G KP GV   AVIG G MG+GIA       I V L
Sbjct: 268 DVAKALRYAFFAEREAAKVPDAPP-GFKPAGVTCAAVIGAGTMGAGIAICFADAGIVVKL 326

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E ++E L +G++ I       V RG++T  + +  L+ ++ V  Y E  D D+V+EAV 
Sbjct: 327 LEASAEALDRGLQRIRDIYAAKVKRGRMTVQEMDACLQFVQPVCHYEEIGDCDVVVEAVF 386

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+ +F++L+    P  +L TN+S ID+N++   T     + GAHFF+PA+ M L 
Sbjct: 387 ERIDLKKDVFTKLDAVMKPGALLLTNSSAIDINVMANMTGRPQNVAGAHFFAPANAMKLC 446

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EIV+ ++TS + ++  M +G+ +KKV  V G C GFA NR+  P      LL+  G    
Sbjct: 447 EIVKGDQTSIETVVRAMKMGRDLKKVCAVSGTCDGFAANRSRAPLVTEMMLLLEEGARPE 506

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-RSFQSPLVDLLLKSGRNGK 414
           +ID  +  FG P+GPF + DL+G  V+  T K    A P  R    P  D +++ GR G+
Sbjct: 507 QIDRVMVEFGYPMGPFAVSDLSGLDVSYDTRKRRAAADPQYRKLHVP--DRMVELGRKGQ 564

Query: 415 ANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            NG G Y YE+G + P+ D  V+ II           G    + T+ EI++ +LF  +NE
Sbjct: 565 KNGAGWYRYEEGDRTPRHDEEVMRIIATVAHEL----GTPQRTFTDSEILKRLLFASINE 620

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           +C++L+EG   RASD+D   + G  FP +RGG+++WAD +GA  ++  +++W + YG  +
Sbjct: 621 ACKILDEGKAYRASDIDVMWLYGFGFPRHRGGLLYWADTIGAKEIHLQVQQWHEQYGRRW 680

Query: 534 KPSRFLEERATKGIPL 549
            PS  L +   +G+ L
Sbjct: 681 TPSPLLSKAGNEGLSL 696


>gi|170701227|ref|ZP_02892196.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           IOP40-10]
 gi|170133856|gb|EDT02215.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           IOP40-10]
          Length = 694

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/527 (35%), Positives = 287/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL DA+   + LL  +  +A  + A++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLANSGLFDAMADGD-LLDAAVAFACKVGAQKGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLQY-SKIADRLCELGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVPGDR-KAKPSAL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|254429789|ref|ZP_05043496.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Alcanivorax sp. DG881]
 gi|196195958|gb|EDX90917.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Alcanivorax sp. DG881]
          Length = 695

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 191/551 (34%), Positives = 298/551 (54%), Gaps = 18/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEEL---LKVSRLWALDIAARRKPWIRSLHRTDKLG 57
           M++    + ++E   LGL+D +V+ + L   L  +R    D A  RK  +R L   D   
Sbjct: 152 MVVGGNPVKAKEALSLGLVDEMVSGDLLDGALAYTRQLLADNAPLRK--LRDLAVPDAQD 209

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
            L +  E   +AR Q    AP      +C+  ++  +      GV +E ++F EL++   
Sbjct: 210 GLFDQFE-QSIARKQRGFKAPF-----SCIKAVKAAVELPFDKGVERERELFFELLVSPE 263

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           S    HVFFA+R  +KVP + D     R + +VAVIG G MG GIA       I V L E
Sbjct: 264 SAAQRHVFFAEREVAKVPGL-DKNTPKREINQVAVIGAGTMGGGIAMNFANAGIPVRLLE 322

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V  + L +G+  I  N      +G++T ++    + +++  L Y +  DVD+VIEAV E+
Sbjct: 323 VKEDALERGVAVIRKNYENTAKKGRITDEQVEQRMALIQPTLSYDDLSDVDLVIEAVFEN 382

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ +FSEL++ C P  ILATNTST+D++ +   T   + ++G HFFSPA+VM LLE 
Sbjct: 383 MDVKEAVFSELDRVCKPGAILATNTSTLDVDRIASFTQRPEDVMGMHFFSPANVMKLLEN 442

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR E+TS +V+  +M + + I KV V+VG C GF  NR        A  LV+ G    ++
Sbjct: 443 VRGEKTSDEVVATVMDLSRRIGKVGVLVGVCHGFVGNRMLHRRQAEAVQLVNEGASPQQV 502

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D  +   G P+GPF + DLAG  V     +E  K  P         D L+++GR G+   
Sbjct: 503 DKVLFDLGFPMGPFAMSDLAGMDVGYRIREELRKEDPANGPARNWTDELVEAGRLGQKTQ 562

Query: 418 KGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
            G++ Y+ G + P P  +V  IIE+ R  + I     P  ++++EI+E  ++ +VNE  +
Sbjct: 563 AGVFDYKDGDRTPVPSTAVDGIIEQYRSNNGIT----PREISDQEILERCMYVMVNEGAK 618

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK-WSQLYGNFFKP 535
           +LEEGI  R  D+D   + G  FP YRGG++FWAD VG   ++  + + + Q   + +KP
Sbjct: 619 ILEEGIAARPLDVDVIWIYGYGFPVYRGGVLFWADQVGVKAIFEKVNEIYQQTGSDVWKP 678

Query: 536 SRFLEERATKG 546
           ++ L + A +G
Sbjct: 679 AKLLSDLAEQG 689


>gi|421866883|ref|ZP_16298545.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
           cenocepacia H111]
 gi|444358524|ref|ZP_21159920.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           cenocepacia BC7]
 gi|358073047|emb|CCE49423.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
           cenocepacia H111]
 gi|443603879|gb|ELT71857.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           cenocepacia BC7]
          Length = 694

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/527 (35%), Positives = 288/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +   + LL  +  +A  + A++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  L  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      P   + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPGLQY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVPGDR-KAKPSSL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYA 668


>gi|407687498|ref|YP_006802671.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
           'Balearic Sea AD45']
 gi|407290878|gb|AFT95190.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
           'Balearic Sea AD45']
          Length = 707

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/507 (35%), Positives = 268/507 (52%), Gaps = 13/507 (2%)

Query: 48  RSLHRTDK--LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 105
           +++ RT    L    E + V      Q KK          C++ +          G+  E
Sbjct: 197 KAIKRTSDITLSMSDETQAVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLAFEDGLKNE 256

Query: 106 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATA 165
            K+F E +    +R   H FFA+RA   V +  D     R + KVA+IG G MG GIA  
Sbjct: 257 GKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPERNIDKVAIIGAGTMGGGIAMN 315

Query: 166 HILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225
                I V + E+  E L KG+  I  N      +GKLTQ++  + + +L G   Y +  
Sbjct: 316 FANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLA 375

Query: 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF 285
           DVD+VIEAV E + +K+ +FS L+K C P  ILA+NTST+D++ +   TS  + +IG HF
Sbjct: 376 DVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHF 435

Query: 286 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSAR 345
           FSPA+VM LLE+V+ E+TSA+VI   M + K IKKV V+VG C GF  NR   PY + A 
Sbjct: 436 FSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREAN 495

Query: 346 LLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDL 405
            L+  G    ++D  +  FG+P+GPF + D+AG  +     +   +          + D 
Sbjct: 496 RLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADR 555

Query: 406 LLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIV 463
           L++ GRNG   G+G Y YE GS+ P PDP VL I  +E  RL  +    +   ++++EI+
Sbjct: 556 LVEKGRNGLKTGRGAYNYEPGSRVPVPDPEVLEIAKQEAERLGVV----QRSDISDEEIL 611

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
             +++ ++NE   +LEEGI  ++SD+D   V G  FP YRGG + +AD VG   +   L 
Sbjct: 612 VRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLT 671

Query: 524 KWSQLYGNFFK----PSRFLEERATKG 546
            +    G++ K    PS  L + A  G
Sbjct: 672 TYRDQLGDYGKMWLEPSDLLVKLAQSG 698


>gi|406596554|ref|YP_006747684.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
 gi|406373875|gb|AFS37130.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii ATCC 27126]
          Length = 707

 Score =  311 bits (798), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/507 (35%), Positives = 268/507 (52%), Gaps = 13/507 (2%)

Query: 48  RSLHRTDK--LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 105
           +++ RT    L    E + V      Q KK          C++ +          G+  E
Sbjct: 197 KAIKRTSDITLSMSDETQAVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLAFEDGLKNE 256

Query: 106 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATA 165
            K+F E +    +R   H FFA+RA   V +  D     R + KVA+IG G MG GIA  
Sbjct: 257 GKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPERNIDKVAIIGAGTMGGGIAMN 315

Query: 166 HILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225
                I V + E+  E L KG+  I  N      +GKLTQ++  + + +L G   Y +  
Sbjct: 316 FANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLA 375

Query: 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF 285
           DVD+VIEAV E + +K+ +FS L+K C P  ILA+NTST+D++ +   TS  + +IG HF
Sbjct: 376 DVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHF 435

Query: 286 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSAR 345
           FSPA+VM LLE+V+ E+TSA+VI   M + K IKKV V+VG C GF  NR   PY + A 
Sbjct: 436 FSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREAN 495

Query: 346 LLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDL 405
            L+  G    ++D  +  FG+P+GPF + D+AG  +     +   +          + D 
Sbjct: 496 RLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADR 555

Query: 406 LLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIV 463
           L++ GRNG   G+G Y YE GS+ P PDP VL I  +E  RL  +    +   ++++EI+
Sbjct: 556 LVEKGRNGLKTGRGAYNYEPGSRVPVPDPEVLEIAKQEAERLGVV----QRSDISDEEIL 611

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
             +++ ++NE   +LEEGI  ++SD+D   V G  FP YRGG + +AD VG   +   L 
Sbjct: 612 VRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLT 671

Query: 524 KWSQLYGNFFK----PSRFLEERATKG 546
            +    G++ K    PS  L + A  G
Sbjct: 672 TYRDQLGDYGKMWLEPSDLLVKLAQSG 698


>gi|407683514|ref|YP_006798688.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
           'English Channel 673']
 gi|407245125|gb|AFT74311.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str.
           'English Channel 673']
          Length = 707

 Score =  311 bits (798), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/507 (35%), Positives = 268/507 (52%), Gaps = 13/507 (2%)

Query: 48  RSLHRTDK--LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 105
           +++ RT    L    E + V      Q KK          C++ +          G+  E
Sbjct: 197 KAIKRTSDITLSMSDETQAVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLAFEDGLKNE 256

Query: 106 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATA 165
            K+F E +    +R   H FFA+RA   V +  D     R + KVA+IG G MG GIA  
Sbjct: 257 GKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPERNIDKVAIIGAGTMGGGIAMN 315

Query: 166 HILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225
                I V + E+  E L KG+  I  N      +GKLTQ++  + + +L G   Y +  
Sbjct: 316 FANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSGTTSYDDLA 375

Query: 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF 285
           DVD+VIEAV E + +K+ +FS L+K C P  ILA+NTST+D++ +   TS  + +IG HF
Sbjct: 376 DVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRPEDVIGLHF 435

Query: 286 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSAR 345
           FSPA+VM LLE+V+ E+TSA+VI   M + K IKKV V+VG C GF  NR   PY + A 
Sbjct: 436 FSPANVMRLLEVVKAEKTSAEVIKTCMKMAKRIKKVAVLVGVCFGFVGNRMIEPYGREAN 495

Query: 346 LLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDL 405
            L+  G    ++D  +  FG+P+GPF + D+AG  +     +   +          + D 
Sbjct: 496 RLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHIAHDPAYGAVADR 555

Query: 406 LLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIV 463
           L++ GRNG   G+G Y YE GS+ P PDP VL I  +E  RL  +    +   ++++EI+
Sbjct: 556 LVEKGRNGLKTGRGAYNYEPGSRVPVPDPEVLEIAKQEAERLGVV----QRSDISDEEIL 611

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
             +++ ++NE   +LEEGI  ++SD+D   V G  FP YRGG + +AD VG   +   L 
Sbjct: 612 VRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGTILDKLT 671

Query: 524 KWSQLYGNFFK----PSRFLEERATKG 546
            +    G++ K    PS  L + A  G
Sbjct: 672 TYRDQLGDYGKMWLEPSDLLVKLAQSG 698


>gi|206560342|ref|YP_002231106.1| putative fatty acid degradation protein [Burkholderia cenocepacia
           J2315]
 gi|198036383|emb|CAR52279.1| putative fatty acid degradation protein [Burkholderia cenocepacia
           J2315]
          Length = 700

 Score =  311 bits (798), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/527 (35%), Positives = 288/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +   + LL  +  +A  + A++ P  R     D+     
Sbjct: 158 MIVSGAPVPSEQLAKSGLFDEMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHD 213

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 214 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 273

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  L  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 274 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 331

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 332 QDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSYDDLKDADLIVEAVFEELG 391

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 392 VKEQVFKKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 451

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 452 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 511

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      P   + S + D L + GR G+  G G
Sbjct: 512 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPGLQY-SKIADRLCEQGRFGQKTGAG 570

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 571 WYDYVPGDR-KAKPSSL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 627

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 628 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYA 674


>gi|241763901|ref|ZP_04761944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
           2AN]
 gi|241366796|gb|EER61228.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
           2AN]
          Length = 699

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 186/509 (36%), Positives = 276/509 (54%), Gaps = 15/509 (2%)

Query: 42  RRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSG 101
           R  P +R+L      G         + AR   K  + N P    C+D +E         G
Sbjct: 198 RPMPLVRNLPCKHPQGD-----AYFQFARNMVKGMSKNFPAPAKCVDAVEAATKKKFADG 252

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSG 161
           +L E ++F  L+    SR L H+F A+RA SK+P+V     K R ++ VAVIG G MG G
Sbjct: 253 LLFERELFINLMWTPESRSLRHLFLAERAASKIPDVPADTPK-RDIKAVAVIGAGTMGGG 311

Query: 162 IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221
           IA   +   I V + E+  E L +GI TI+ N    V +GKL QDK    + +L   LDY
Sbjct: 312 IAMNFLNAGIPVKMLEMKQEALDRGIATIKKNYEAQVKKGKLKQDKYEQRMALLSTTLDY 371

Query: 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRII 281
           ++ KD D+VIEAV E + +K+ +F +L+    P  ILA+NTST+D+N +   T     ++
Sbjct: 372 ADLKDADLVIEAVFEELGVKEAVFKQLDAVMKPGAILASNTSTLDVNKIAHFTQRPQDVV 431

Query: 282 GAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 341
           G HFFSPA+VM LLE+VR + T+  V+  +M V K I+K  VV G C GF  NR    Y 
Sbjct: 432 GLHFFSPANVMKLLEVVRGDATAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYG 491

Query: 342 QSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP 401
           +    L+  G    ++D A+  FG+ +GPF++ DLAG  +  A  K      PD  + S 
Sbjct: 492 RQGGFLLDEGCTPEQVDKAMEKFGMAMGPFRMGDLAGNDIGWAIRKRRYTEKPDMKY-SK 550

Query: 402 LVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
             DLL + GR G+  G G Y Y  G +   P+  V+ +IE+ R    I P      ++++
Sbjct: 551 TADLLCEKGRFGQKTGAGWYDYVPGKRDAIPNAEVVKMIEDHRASLGITPR----KISDE 606

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EIV+ ++F +VNE+  +LEEGI  +ASD+D   + G  FP YRGG + +A+ VG   V  
Sbjct: 607 EIVQRLVFSLVNEAAHILEEGIANKASDIDVVYIFGYGFPVYRGGPLNYANEVGLFNVVQ 666

Query: 521 SLKKWSQL---YGNFFKPSRFLEERATKG 546
           ++ ++++       F+KP+  L + A +G
Sbjct: 667 AMNRFAKNPLDDAAFWKPAPLLAKLAAEG 695


>gi|192292604|ref|YP_001993209.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris TIE-1]
 gi|192286353|gb|ACF02734.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Rhodopseudomonas
           palustris TIE-1]
          Length = 699

 Score =  311 bits (796), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 187/548 (34%), Positives = 295/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GL++ +V  E L+  +  +A  + A ++P  R      KL +  
Sbjct: 152 MIVGGSPIGAAEALKHGLVEEIV--ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K A  +    AC D I   I      G+ KE + F +LV+ D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +KV  V D G KPR V +VA+IG G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRAVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG L  D     + ++ GV+     KD D++IEAV E++ +
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGVVGLENVKDADLIIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ ++    P  +LA+NTS + ++ +   T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFTAIDAHAKPGAVLASNTSYLSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+   +L  +++ K I KVPVVVG C GF  NR     S+ +  L+  G    ++D+ 
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE+GS+ P PDP V  +I +   L+ +  G K   +T++EI+E +++P++NE  R+LE
Sbjct: 562 YKYEQGSRAPMPDPEVETLINDT--LAKL--GLKRRDITDEEILERMVYPMINEGARILE 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           E I  R SD+D   + G  +P YRGG + +AD+VG  ++   L  +++   +   +P+  
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERLSAYAKATNDPSLEPAPL 677

Query: 539 LEERATKG 546
           L   A +G
Sbjct: 678 LARLAAEG 685


>gi|254510901|ref|ZP_05122968.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
 gi|221534612|gb|EEE37600.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium KLH11]
          Length = 697

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 176/450 (39%), Positives = 260/450 (57%), Gaps = 9/450 (2%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
           SG+++E ++F EL+  D  +GL+H FFA+RA SK+P +   G+ PR + ++ VIGGG MG
Sbjct: 244 SGLVRERELFTELMASDQRKGLIHAFFAERAVSKLPELQ--GVVPRDLHQIGVIGGGTMG 301

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGV 218
           +GIAT+ +L  + VVL E+  E        I +N+ G V RGKL+Q   ++ L+  L+  
Sbjct: 302 AGIATSALLAGLPVVLLEMTPEAAKAAQARIASNLAGAVKRGKLSQSDHDDILQNRLELA 361

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           LDY   ++VD+VIEAV E + +K+++F++L+  C    +LATNTS +D+N +   T   D
Sbjct: 362 LDYDALQNVDLVIEAVFEDMEVKKQVFAQLDAVCKGGAVLATNTSYLDINEIAALTRRPD 421

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
            +IG HFFSPAHVM LLE+V  +RT+ +V+     +GK + K  V  G C GF  NR   
Sbjct: 422 DVIGLHFFSPAHVMKLLEVVVADRTAPEVVATGFALGKRLGKTAVRAGVCDGFIGNRILS 481

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-RS 397
            Y   A  +V  G   ++ID+A+ +FG  +GPF + DLAG  +  A  K    A  D R+
Sbjct: 482 AYRTCADHMVLDGASPYQIDAALTAFGFAMGPFAVSDLAGLDIGWAARKRKRAAGLDPRA 541

Query: 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPIS 456
             S   D L + G  G+  GKG Y YE G +   P+P V+P+IE  R    I   G    
Sbjct: 542 RDSFYADKLCEGGYFGQKTGKGYYVYETGRRGGVPNPEVMPLIEAERAAQGISARG---- 597

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
            T+ EIV   +  +VNE+ RV+ EGI  R  D+D   + G  FP Y GG + WAD  G  
Sbjct: 598 FTDDEIVRRYMVAMVNEAARVIGEGIARRPLDVDVTLIYGYGFPRYWGGPLKWADLQGLP 657

Query: 517 YVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            +   +++WS+    F++P+  LE+   +G
Sbjct: 658 NLLDDIRRWSEEDPYFWQPAPLLEQLVAEG 687


>gi|126665779|ref|ZP_01736760.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
 gi|126629713|gb|EBA00330.1| fatty oxidation complex, alpha subunit [Marinobacter sp. ELB17]
          Length = 697

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/541 (34%), Positives = 288/541 (53%), Gaps = 10/541 (1%)

Query: 8   ITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 67
           + +++   LG++D V   +++      +A  IA   KP  R     DK+ +  +  +V  
Sbjct: 159 VGAKDALALGILDVVDDGKDVKAAGLAYAQQIADEGKPVRRVRDLKDKIAA-DKGSDVFD 217

Query: 68  LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 127
             R   +K A        C+D IE         G+ +E ++F E +      G +H FFA
Sbjct: 218 QFRAVLQKKARGQFSPFKCVDAIEAAFDLPFAEGMKRERELFTECMDSPQRAGQIHSFFA 277

Query: 128 QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187
           +R  SKV  ++      R V  V +IG G MG GIA       I V++ E+  E L KG+
Sbjct: 278 EREVSKVKGLSK-DTPVRDVNSVGIIGAGTMGGGIAMNFANVGIPVIIVEMKQEALDKGL 336

Query: 188 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 247
             I  N      +G+LTQ +  +   ++ G L Y +FK VD+VIEAV E++ +K++IF++
Sbjct: 337 GIIRKNYENSAKKGRLTQQQVEDRTALITGSLSYDDFKSVDLVIEAVFENMAVKKEIFAK 396

Query: 248 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 307
           L+  C P  ILA+NTST+D++ +   T   + ++G HFFSPA+VM LLE VR  +TS +V
Sbjct: 397 LDGICKPGTILASNTSTLDIDEIASATRRPEDVVGMHFFSPANVMKLLENVRGSKTSDEV 456

Query: 308 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
              +M V K IKKV V+VGNC GF  NR        A  LV+ G    ++D  +   G P
Sbjct: 457 KATVMAVAKKIKKVGVLVGNCHGFVGNRMLHRRGAEAMTLVNEGATPQQVDKVLTDLGYP 516

Query: 368 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS 427
           +G F + DLAG  V     +E   A          +D L +  R G+   KG+Y YE+GS
Sbjct: 517 MGQFAMSDLAGIDVGYRIREELRNA--GEQVAPSWMDKLAEQNRLGQKTMKGVYAYEEGS 574

Query: 428 K-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 486
           + P PDP V  +IE+ R    I        +T++EI+E  ++ +VNE+ ++LEEG+  RA
Sbjct: 575 RTPVPDPEVERVIEDFRNEQGI----SSREITDQEILERCMYVMVNEAAKILEEGVADRA 630

Query: 487 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEERATK 545
            D+D   + G  FP+YRGG +FWAD VG + +  +++K+   + G  +KP+  L++    
Sbjct: 631 LDIDVVWIYGYGFPAYRGGPMFWADQVGLDLILAAVEKYHGDVGGEQWKPADLLKQLVAD 690

Query: 546 G 546
           G
Sbjct: 691 G 691


>gi|84684289|ref|ZP_01012191.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84668042|gb|EAQ14510.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Rhodobacterales bacterium HTCC2654]
          Length = 698

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/548 (34%), Positives = 292/548 (53%), Gaps = 19/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M L  + ++ EE   +GLID +   E      R  AL  A           RT  LG   
Sbjct: 158 MALSGRQVSGEEALSMGLIDGLEAGE-----PRDVALAAAEDVLSGKLKTRRTSDLGVEL 212

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG--YSGVLKEAKVFKELVMLDTS 118
           +   +   A++ AKK    M  H    ++IE   +  G    G+  E K F E +    S
Sbjct: 213 DEAALDDAAKMVAKK----MKHHPTAPNMIEAVRMSTGPMADGMAYERKSFMEGLKDPAS 268

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           +G+ H FFA+RA SK+P        PR + K+ VIGGG MGSGIATA + +   V L E+
Sbjct: 269 QGMRHAFFAERAVSKIPEGK---ATPREIAKIGVIGGGTMGSGIATAALTSGFAVRLIEI 325

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           + E L KG+  I  N+ G V RGK+++ K +NA+  L+   D     DVD+VIEAV E++
Sbjct: 326 SQEGLDKGVGFITGNLGGAVKRGKMSEAKRDNAMARLEPSTDMESLSDVDLVIEAVFENM 385

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ IF +L+K C P  ILA+NTS +D+N +   TS  + +IG HFFSPA++M LLE+V
Sbjct: 386 DVKKDIFGQLDKICKPGAILASNTSYLDINEIASATSRPEDVIGLHFFSPANLMRLLEVV 445

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
             ++T+ +V+     + K +KKV V  G C GF  NR    Y ++A  L+  G    +ID
Sbjct: 446 VADKTAPEVVATGFALAKKMKKVGVRAGVCDGFIGNRILAYYGKTAGYLMEDGASPQQID 505

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
           +A+  FG  +GP+++ DLAG  +  A  K      P+      + D + + G  G+  G 
Sbjct: 506 NALEDFGFAMGPYKVGDLAGLDIGWANRKRMSATRPNDERYVRIHDKICEEGMFGRKTGS 565

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G Y Y+     +P+P  L II+  R    I+    P + T++EIVE  +  +++E+ RV+
Sbjct: 566 GFYIYDD-EGIRPNPRALEIIDAERAAKGIL----PKTFTDEEIVERYMTAMISEAARVV 620

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEGI +R  D+D   + G  FP +RGG + +AD +GA  +   ++++++    ++K    
Sbjct: 621 EEGIALRPIDVDAVFLFGYGFPRFRGGPLHYADTIGAKELVARIERYAEDDAYYWKVPAI 680

Query: 539 LEERATKG 546
           L   A  G
Sbjct: 681 LRRMAEDG 688


>gi|171322824|ref|ZP_02911545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           MEX-5]
 gi|171091819|gb|EDT37322.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           MEX-5]
          Length = 615

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/548 (34%), Positives = 295/548 (53%), Gaps = 12/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL DA+   + LL  +  +A  + A++ P  R     D+     
Sbjct: 73  MIVSGAPVPSEQLANSGLFDAMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHE 128

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 129 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 188

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+ +V  D  +  R +R+V VIG G MG GIA   +   + V L E  
Sbjct: 189 LRHAFFGERAASKIADVPADTPV--REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLETK 246

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 247 QDALERGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 306

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 307 VKEQVFGRLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 366

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 367 GAHTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 426

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 427 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEKPDLQY-SKIADRLCEQGRFGQKTGGG 485

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 486 WYDYVPGDR-KAKPSAL--VDEMVVAYSKERGIERRKIGDDEIVERLVFALVNEGAKILE 542

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL-YGNFFKPSRF 538
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++    G+ ++ +  
Sbjct: 543 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYAAAPNGDAWQLAPS 602

Query: 539 LEERATKG 546
           + ERA+ G
Sbjct: 603 IAERASAG 610


>gi|335423412|ref|ZP_08552434.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
           shabanensis E1L3A]
 gi|334891993|gb|EGM30238.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Salinisphaera
           shabanensis E1L3A]
          Length = 695

 Score =  310 bits (794), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 189/537 (35%), Positives = 298/537 (55%), Gaps = 20/537 (3%)

Query: 16  LGLIDAVVTSE---ELLKVSRLWALDIAARRKPWIRSLHR-TDKLGSLSEAREVLKLARL 71
           +G+ID VV+ +   E +  +     D A RRK    S+ + +D + S  E      +AR 
Sbjct: 167 MGVIDEVVSGDLKAEAIAYAEKLVADGAPRRKVSELSVEKESDNVFSEFEQ----SIAR- 221

Query: 72  QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131
             KK     P H  C+  ++        +G+ +E ++F EL+    S    HVFFA+R  
Sbjct: 222 --KKRGFLAPFH--CIKAVQAATELDFAAGMKRERELFTELLNSPESAAQRHVFFAEREV 277

Query: 132 SKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 191
            KVP ++    K R +++V +IG G MG GIA   +   I V + E+  E L KG+  I 
Sbjct: 278 GKVPGISKETPK-RDIKQVGIIGAGTMGGGIAMNFLSAGIPVKMLEMKQEALDKGVALIR 336

Query: 192 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 251
            N      +G++T D+    + ++   L Y +  DVD+VIEAV E++ +K+++F EL++ 
Sbjct: 337 KNYEATAKKGRMTSDQVEKCMSLISTSLSYDDLSDVDLVIEAVFENMKVKKQVFGELDRV 396

Query: 252 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 311
           C    ILATNTST+D+N + + T+  + +IG HFFSPA+VM LLE VR E TS +VI  +
Sbjct: 397 CKDGAILATNTSTLDVNEIAQSTNRPEDVIGMHFFSPANVMKLLENVRGEATSDEVIATV 456

Query: 312 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 371
           M + K I KV V+VG C GF  NR        A  LV+ G    ++D  +  FGLP+GPF
Sbjct: 457 MDLSKRIGKVGVLVGVCNGFVGNRILHKRQAQAVKLVNEGATPSQVDKVLFDFGLPMGPF 516

Query: 372 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PK 430
            + DLAG  V     +   +  P+ + +   +D L +  R G+  G G++ Y +G + P+
Sbjct: 517 AMADLAGLDVGWRIREGLREDDPENAPERDWMDALAEQERWGQKTGGGVFDYAEGDRTPR 576

Query: 431 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 490
           P  + +  IE+ R+   I    +   V+++EI+E  L+ +VNE  ++LEEGI +R  D+D
Sbjct: 577 PSDTAMAEIEKYRKEKGI----ETREVSDQEILERCLYVMVNEGAKILEEGIAMRPLDVD 632

Query: 491 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKG 546
              + G  FP YRGG++FWAD VG + ++  +K++    G+  ++PS  LE+ A++G
Sbjct: 633 IVWIYGYGFPVYRGGLMFWADQVGLDKIHAKVKQFYDESGDPVWQPSALLEKLASEG 689


>gi|399073892|ref|ZP_10750710.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
 gi|398041049|gb|EJL34131.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. AP07]
          Length = 692

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 184/547 (33%), Positives = 287/547 (52%), Gaps = 16/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + ++    +GL D++V  + L   +  +A  + A  KP  R   +  K+ +  
Sbjct: 155 MVTTGQHVPAKAALAMGLFDSIVEEDALRDGAIAFARVVLAEDKPLTRIRDQNAKVEAAR 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+    R    +        +  +  IE  +      G+ +E K+F EL+    S  
Sbjct: 215 GKPEIFSEFRAANARKFRGFLAPENNIKCIEAAVNLPFDEGLKEERKLFMELMTGSQSAA 274

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             HVFFA+R  +K+P+V  D  + P  VRKV VIG G MG GI+   +   I V + E  
Sbjct: 275 QRHVFFAERQAAKIPDVPDDTAIIP--VRKVGVIGAGTMGGGISMNFLNAGIPVTIIEAK 332

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  I  N      +G+LTQD     + +L   +   +  D D++IEAV E + 
Sbjct: 333 QENLDRGVGVIRKNYENTAKKGRLTQDDVEKRMALLTPSMHLEDLADCDLIIEAVFELME 392

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +KQ++F +L+K   P  ILA+NTS +D++++   TS  + +IG HFFSPA+VM LLEIVR
Sbjct: 393 IKQEVFGKLDKIAKPGAILASNTSYLDIDVIAASTSRPESVIGLHFFSPANVMRLLEIVR 452

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T   VI   M +GK I KV V+VGNC GF  NR      + A+ L+  G   + +D 
Sbjct: 453 GAKTDKSVIATSMQIGKKIGKVAVLVGNCHGFVGNRMLAQRQREAQKLILEGAMPWDVDR 512

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FGLP+GPF + DLAG  +       +D   P ++  S + ++L +  R G+ NGKG
Sbjct: 513 VLYDFGLPMGPFAMSDLAGLDIG------WD---PAKTSSSTVREVLCEMDRRGQKNGKG 563

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++    KP   V  +I +      I    +   ++++EI+E  L+P+VNE  ++LE
Sbjct: 564 FYDYDENRVAKPSAEVEKVILDFAEKRQI----QRREISDQEILERCLYPMVNEGAKILE 619

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG  +RASD+D   + G  +P Y GG +FW + VG + V   +K + +  G+ FKPS  L
Sbjct: 620 EGKAIRASDIDTVWINGYGWPVYSGGPMFWGELVGLDKVLAGMKAFQEKLGDDFKPSALL 679

Query: 540 EERATKG 546
           E    +G
Sbjct: 680 ERLVAEG 686


>gi|407976062|ref|ZP_11156964.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
           [Nitratireductor indicus C115]
 gi|407428563|gb|EKF41245.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
           [Nitratireductor indicus C115]
          Length = 690

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 193/552 (34%), Positives = 291/552 (52%), Gaps = 26/552 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-WALDIAARRKPWIRSLHRTDKLGSL 59
           +++  K I  +E + LG +D +   +  LK   + +A +  A   P      R+DKL   
Sbjct: 152 IIVSGKPIGMDEAFSLGAVDRIAEGD--LKSEAISFAREKLAEEAPHHHIRERSDKLQID 209

Query: 60  SEARE--VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
             A E  + ++AR     TAP         + +   +     + + +E ++F E V  + 
Sbjct: 210 DAAFETAIEQVARKARGLTAP-----VKAAESVRNAVTMEFGAALAREREIFLERVASEE 264

Query: 118 SRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
           S    H+FFA R  +KV  V  DI  +P  V ++ VIG G MG GIA A     + V L 
Sbjct: 265 SAAQRHLFFATREAAKVRGVGRDIEARP--VARIGVIGAGTMGGGIAMAFANGGLPVTLL 322

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E+N E L +G+  I+ N  G V RG +++D+    L  ++G   Y      D+VIEAV E
Sbjct: 323 EMNDEALARGLHQIDRNYAGSVKRGSISEDEKTARLARIQGTTSYDALAGCDLVIEAVFE 382

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +K+++F  L+K   P  ILATNTS +D+N +   TS    ++G HFFSPAH+M LLE
Sbjct: 383 KMDVKRQVFGALDKVLKPGAILATNTSYLDVNEIAAVTSRPQDVVGLHFFSPAHIMKLLE 442

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           IVR +RT+  V+   + + + I KVPVVVG C GF  NR      +    L+  G    +
Sbjct: 443 IVRGDRTAPDVLATALALARRIGKVPVVVGVCNGFVGNRMLAARREQNEALLLEGATPAQ 502

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +D     FG P+GPFQ+ DL+G  +A    K   +        +P+ D L ++G  G+ +
Sbjct: 503 VDKVFTQFGWPMGPFQMADLSGLDIAWNNRKSLGQ-------TAPIADALCEAGHFGQKS 555

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G+G Y YE G++ P PDP V  +IE  R+ + +  G +  S+  +EI+E  L+P++NE  
Sbjct: 556 GRGFYLYEDGARIPIPDPDVQALIE--RKAAEL--GVERRSIDAEEIIERTLYPMINEGA 611

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFK 534
           R+LEEGI  RASD+D   V G  FP  +GG +FWA+  G   +   L+ W    GN  F+
Sbjct: 612 RILEEGIATRASDIDVVWVNGYGFPLAKGGPMFWAERFGPARIVERLEHWHGRTGNALFE 671

Query: 535 PSRFLEERATKG 546
           P+  L + A  G
Sbjct: 672 PAPLLRQLALTG 683


>gi|332141154|ref|YP_004426892.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|410861466|ref|YP_006976700.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
 gi|327551176|gb|AEA97894.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|410818728|gb|AFV85345.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas macleodii AltDE1]
          Length = 708

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/515 (36%), Positives = 270/515 (52%), Gaps = 18/515 (3%)

Query: 38  DIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 97
           D A +R   I SL  TD      E + V      Q KK          C++ +       
Sbjct: 196 DKAIKRTCDI-SLTMTD------ETKGVFDAVTAQTKKATRGFFAPLKCIEAVRGAYTLA 248

Query: 98  GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 157
              G+  E K+F E +    +R   H FFA+RA   V +  D     R + KVA+IG G 
Sbjct: 249 FDDGLKNEGKLFMECMNTPQARAQQHFFFAERAAGHVSDF-DKNTPERSIEKVAIIGAGT 307

Query: 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217
           MG GIA       I V + E+  E L KG+  I  N      +GKLTQ++  + + +L G
Sbjct: 308 MGGGIAMNFANAGIPVTMLELKEEALEKGLALIRKNYENSAKKGKLTQEQVESRMALLSG 367

Query: 218 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 277
              Y +  DVD+VIEAV E + +K+ +FS L+K C P  ILA+NTST+D++ +   TS  
Sbjct: 368 TTSYDDLSDVDLVIEAVFEKMEVKKTVFSTLDKVCKPGAILASNTSTLDIDEIATATSRP 427

Query: 278 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 337
           + +IG HFFSPA+VM LLE+V+ E+TSA+VI   M + K I+KV V+VG C GF  NR  
Sbjct: 428 ENVIGLHFFSPANVMKLLEVVKAEKTSAEVIKTCMKMAKRIRKVAVLVGVCFGFVGNRMI 487

Query: 338 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 397
            PY + A  L+  G    ++D  +  FG+P+GPF + D+AG  +     +   +      
Sbjct: 488 EPYGREANRLLLEGATPEQVDRVLTEFGMPMGPFTMGDMAGLDIGYYVRQSRQEHISHDP 547

Query: 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPI 455
               + D L++ GRNG   G+G Y YE GS+ P PDP VL I  +E  RL       +  
Sbjct: 548 AYGAVADRLVEKGRNGLKTGRGAYNYEPGSRVPIPDPEVLEIAKQEAERLGV----QQRS 603

Query: 456 SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGA 515
            ++++EI+  +++ ++NE   +LEEGI  ++SD+D   V G  FP YRGG + +AD VG 
Sbjct: 604 DISDEEILVRVMYSLINEGAAILEEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGL 663

Query: 516 NYVYTSLKKWSQLYGNFFK----PSRFLEERATKG 546
             +   L  +    G + K    PS  L + A +G
Sbjct: 664 GTILDKLTTYRDQLGEYGKMWLEPSDLLVKLAQEG 698


>gi|319762270|ref|YP_004126207.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
 gi|330825800|ref|YP_004389103.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
 gi|317116831|gb|ADU99319.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
           denitrificans BC]
 gi|329311172|gb|AEB85587.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
          Length = 699

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 187/513 (36%), Positives = 276/513 (53%), Gaps = 14/513 (2%)

Query: 18  LIDAVVTSEELLKVSRL-WALDIA-ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E L    L +A  +A AR  P +R+L          E     + AR   K 
Sbjct: 172 LFDRMAASPESLPEEALAFARSVAEARPLPLVRNLPCKH-----PEGDAYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E ++F  L+    SR L H+FFA+RA SK+P
Sbjct: 227 MAKNFPAPAKCVDAVEAATRRKFADGLQYERELFINLMWTPESRALRHLFFAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V     K R ++KV VIG G MG GI+   +   I V + E+  E L +GI TI  N  
Sbjct: 287 DVPSDTPK-RDIKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIATIRKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL +DK    + +L   L Y + KD D++IEAV E + +K+ +F +L++   P 
Sbjct: 346 AQVKKGKLKEDKYQQRMALLSTTLSYDDLKDCDLIIEAVFEELGVKEAVFRQLDQVAKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+  V+  +M + 
Sbjct: 406 AILASNTSTLDVDRIAAFTRRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K I+K  VV G C GF  NR    YSQ A  L+  G    ++D AI  FG  +GPF++ D
Sbjct: 466 KKIRKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGCTPSQVDKAIERFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y  G +   P P 
Sbjct: 526 LAGNDIGWAIRKRRYVEKPDMKY-SKTADLLCEMGRFGQKTGAGWYDYAPGKRDAIPSPM 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V  ++EE R+   I     P  ++++EIV+ +++ +VNE  ++LEEGI  +A D+D   +
Sbjct: 585 VEKMVEEHRKALGI----APRKISDEEIVQRLVYSLVNEGAKILEEGIASKAGDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            G  FP +RGG + +A  VG   V  ++K++++
Sbjct: 641 TGYGFPIHRGGPMHYASEVGLFNVVQAMKRFAR 673


>gi|409396617|ref|ZP_11247597.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
 gi|409118799|gb|EKM95190.1| enoyl-CoA hydratase [Pseudomonas sp. Chol1]
          Length = 705

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 293/548 (53%), Gaps = 12/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG-SL 59
           M++  + IT+ E  +  ++D +   +      R  AL  A R     R   RT +L    
Sbjct: 152 MIVSGQPITAAEALEHLIVDELFDGD-----PRAAALAYAQRLLDEGRRPRRTGELSVPG 206

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +++ E++     +  +  P +     C+  +E         G+ +E ++F E +      
Sbjct: 207 TDSAELIAARHAEVARRTPGLFAPLRCIAAVEAATRLPLAEGLERERQLFLECLHSPQRA 266

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            LVH FFA+R   K+ ++     +PR +   AVIGGG MG GIA       + V L EV+
Sbjct: 267 ALVHAFFAERQAGKIADLP-AATRPREIATAAVIGGGTMGVGIALCFANAGVPVKLLEVS 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L + ++         V RG L++ +    L ++ GV DY+   +VD+V+EAV E + 
Sbjct: 326 DEALQRALQRARDTCAVSVRRGSLSEAEMERRLALIAGVTDYAALAEVDLVVEAVFEDMA 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +KQ++F  L+  C P  ILA+NTS++DLN +   T   + ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKQQVFERLDAVCKPGAILASNTSSLDLNQIAAFTRRPEDVVGLHFFSPANVMRLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             RTS  V+   M +GK +KKV VVVG C GF  NR  F Y + A  L+  G    ++D 
Sbjct: 446 GARTSHAVLATAMAIGKRLKKVAVVVGVCDGFVGNRMLFQYGREAEFLLEEGATPQQVDG 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R+FG+ +GPF + DL+G  +  A  K      P       + D L  +G  G+  G G
Sbjct: 506 ALRNFGMAMGPFAVRDLSGLDIGQAIRKRQRALLPAHLEFPTVADRLCAAGMLGQKTGVG 565

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE G++ P  +P++ P++E   R   +    +  ++ E+ IVE  L+ +VNE  ++L
Sbjct: 566 YYRYEPGNRTPLENPALAPMLEAASREKGL----ERQTLDEQYIVERCLYALVNEGAKIL 621

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEGI  RASD+D   + G  FP++RGG +F AD+VG   V  ++K+     G+++KP+  
Sbjct: 622 EEGIAQRASDIDLIYLNGYGFPAWRGGPMFHADSVGLAKVLATVKELHARCGDWWKPAPL 681

Query: 539 LEERATKG 546
           LE+ A +G
Sbjct: 682 LEKLAAEG 689


>gi|344170553|emb|CCA82972.1| fused 3-hydroxybutyryl-CoA
           epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase,enoyl-CoA hydratase, 3-hydroxyacyl-CoA
           dehydrogenase [blood disease bacterium R229]
          Length = 693

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 194/548 (35%), Positives = 288/548 (52%), Gaps = 13/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++   +I SE+  K GL D ++  + +           A  + P +R     D+     
Sbjct: 152 MIVSGTAIPSEKLAKSGLFDQMIEGDLMAGAIAFAQKAAADGKLPKLR-----DRKVEHD 206

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR 
Sbjct: 207 NPEGFLQFARNTVAAVAKNFPAPGKCIDAVQAAVEKRFDDGIQFERALFIELVNTTESRA 266

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V +     R V  VAVIG G MG GI+   +   I V L E   
Sbjct: 267 LRHAFFGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGISMNFLNAGIPVTLLETRQ 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +GI TI  N      +GKLTQ+K    + +LK  L Y + KD D+VIEAV E + +
Sbjct: 326 EALDRGIATIRKNYENSAKKGKLTQEKVEEFMALLKPTLSYDDIKDADLVIEAVFEDMGV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 386 KETVFKTLDEVVKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVRG 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A
Sbjct: 446 KATAKDVLATVMKIAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRA 505

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G 
Sbjct: 506 VEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIIY-SKTADLLCEKGRFGQKTGAGW 564

Query: 421 YTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+ G  KP P   V  +I +  +   I        ++++EIVE +++ +VNE  ++L+
Sbjct: 565 YDYKAGDRKPYPSQEVNDMIVQHSKALGIT----RRKISDEEIVERLVYALVNEGAKILD 620

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRF 538
           EGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +KP+  
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVVQAMHRYSKGYQGEAWKPAPL 680

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 681 LQKLAGEG 688


>gi|295688202|ref|YP_003591895.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
           segnis ATCC 21756]
 gi|295430105|gb|ADG09277.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Caulobacter
           segnis ATCC 21756]
          Length = 692

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 182/546 (33%), Positives = 286/546 (52%), Gaps = 14/546 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + ++    +GL D +V    L   +  +A  + A  +P  +     DK+ +  
Sbjct: 155 MVTSGQHVPAKAAHAMGLFDELVEEGSLRAGAIAFARKVVAENRPLKKVRELNDKVEAAR 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+ +  R    K        +  +  +E  +      G+ +E ++F EL+    S  
Sbjct: 215 GKPEIFESFRAANAKKFRGFMAPENNIKCVEAAVNLPFDEGLKEERRLFMELMTGSQSAA 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             +VFFA+R  +K+P+V D       V+KV VIG G MG GIA   +   I V + E   
Sbjct: 275 QRYVFFAERQAAKIPDVPD-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQ 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  I  N      +G+LTQD     + +L   ++     D DM+IEAV E + +
Sbjct: 334 ENLERGVGVIRKNYENTAKKGRLTQDDVEKRMGLLTPSMEMEALADCDMIIEAVFELMEI 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F++L+K   P  ILATNTS +D+N +   TS  + +IG HFFSPA+VM LLE+VR 
Sbjct: 394 KKEVFAKLDKIAKPGAILATNTSYLDVNEIAAVTSRPESVIGTHFFSPANVMRLLELVRG 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS +VI   M + K I KV V+VG C GF  NR      + A+ L+  G   + +D  
Sbjct: 454 DKTSKEVIATCMKLSKTIGKVAVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRV 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FGLP+GPF + DLAG  +    SK         +  S + ++L +  R G+ NGKG 
Sbjct: 514 LYDFGLPMGPFAMSDLAGLDIGWDASK---------TSSSTVREVLCEMDRRGQKNGKGF 564

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++     P P V  +I +      I    +  ++T++EI+E  L+P+VNE  ++LEE
Sbjct: 565 YDYDENRNASPSPVVEQVIRDFAEKRQI----QRRTITDQEILERCLYPMVNEGAKILEE 620

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G  +RASD+D   + G  +P YRGG +FW + VG + +   +K++   YG+ FKPS  LE
Sbjct: 621 GKAIRASDIDIVWINGYGWPVYRGGPMFWGELVGLDKILAKMKEFQAQYGDDFKPSALLE 680

Query: 541 ERATKG 546
               +G
Sbjct: 681 RLVAEG 686


>gi|187928533|ref|YP_001899020.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
           12J]
 gi|187725423|gb|ACD26588.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
           12J]
          Length = 693

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 198/549 (36%), Positives = 295/549 (53%), Gaps = 15/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSL 59
           M++   +I SE+  K GL D ++  + L+  +  +AL  AA  K P +R     D+    
Sbjct: 152 MIVSGNAIPSEKLAKSGLFDQMIEGD-LMAGAIDFALKAAAEGKLPKLR-----DRKVEH 205

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              +  L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR
Sbjct: 206 DNPQGFLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTSKSR 265

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L H FF +RA SK+P+V +     R V KVAVIG G MG GI+   +   I V + E  
Sbjct: 266 ALRHAFFGERAASKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTMLETK 324

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N      +GKLTQ+K    + +L   L Y + KD D+VIEAV E + 
Sbjct: 325 QEALDRGVATIRKNYENSAKKGKLTQEKVEQRMALLTPTLSYDDIKDADLVIEAVFEEMG 384

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F +L++      ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 385 VKEVVFKKLDEVVKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEVVR 444

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D 
Sbjct: 445 GKDTAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDK 504

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G
Sbjct: 505 AIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEMGRFGQKTGGG 563

Query: 420 LYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y+ G  KP P+  V  +I +  +   I        ++++EIVE ++F +VNE  ++L
Sbjct: 564 WYDYKAGDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKIL 619

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSR 537
           EEGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +K + 
Sbjct: 620 EEGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYSKGYHGEAWKVAP 679

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 680 LLQKLADEG 688


>gi|316933001|ref|YP_004107983.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein
           [Rhodopseudomonas palustris DX-1]
 gi|315600715|gb|ADU43250.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
           [Rhodopseudomonas palustris DX-1]
          Length = 699

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 187/548 (34%), Positives = 296/548 (54%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GL++ +V  E L+  +  +A  + A ++P  R      KL +  
Sbjct: 152 MIVGGSPIGAAEALKHGLVEEIV--ENLVAGAVAFAKKVVAEKRPTRRLRDDDSKLAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K A  +    AC D I   I      G+ KE + F +LV+ D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +KV  V D G KPR V +VA+IG G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG L  D     + ++ GV+     KD D++IEAV E++ +
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGVVGLENVKDADLIIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ ++    P  +LA+NTS + ++ +   T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFTAIDAHAKPGAVLASNTSYLSIDDIAAVTKRPQDVLGMHFFSPANVMKLCEIVRG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+   +L  +++ K I KVPVVVG C GF  NR     S+ +  L+  G    ++D+ 
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  +I +   L+ +  G K   +T++EI+E +++P++NE  R+LE
Sbjct: 562 YKYEAGSRAPMPDPEVETLINDT--LAKL--GLKRRDITDEEILERMVYPMINEGARILE 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF-FKPSRF 538
           E I  R SD+D   + G  +P YRGG + +AD+VG  ++   L  +++   +   +P+  
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERLAYYAKATNDLSLEPAPL 677

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 678 LKKLADEG 685


>gi|309781993|ref|ZP_07676723.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
 gi|404377685|ref|ZP_10982785.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
 gi|308919059|gb|EFP64726.1| enoyl-CoA hydratase [Ralstonia sp. 5_7_47FAA]
 gi|348611680|gb|EGY61320.1| hypothetical protein HMPREF0989_04269 [Ralstonia sp. 5_2_56FAA]
          Length = 693

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 198/549 (36%), Positives = 295/549 (53%), Gaps = 15/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSL 59
           M++   +I SE+  K GL D ++  + L+  +  +AL  AA  K P +R     D+    
Sbjct: 152 MIVSGNAIPSEKLAKSGLFDQMIEGD-LMAGAIDFALKAAAEGKLPKLR-----DRKVEH 205

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              +  L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR
Sbjct: 206 DNPQGFLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTSESR 265

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L H FF +RA SK+P+V +     R V KVAVIG G MG GI+   +   I V + E  
Sbjct: 266 ALRHAFFGERAASKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETK 324

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N      +GKLTQ+K    + +L   L Y + KD D+VIEAV E + 
Sbjct: 325 QEALDRGVSTIRKNYENSAKKGKLTQEKVEQRMALLTPTLSYDDIKDADLVIEAVFEEMG 384

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F +L++      ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 385 VKEVVFKKLDEVVKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEVVR 444

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D 
Sbjct: 445 GKDTAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDK 504

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G
Sbjct: 505 AIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEMGRFGQKTGGG 563

Query: 420 LYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y+ G  KP P+  V  +I +  +   I        ++++EIVE ++F +VNE  ++L
Sbjct: 564 WYDYKAGDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKIL 619

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSR 537
           EEGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +K + 
Sbjct: 620 EEGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYSKGYHGEAWKVAP 679

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 680 LLQKLADEG 688


>gi|433772523|ref|YP_007302990.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
 gi|433664538|gb|AGB43614.1| 3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium australicum WSM2073]
          Length = 686

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 192/545 (35%), Positives = 281/545 (51%), Gaps = 19/545 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I ++E +  GL+DAV   + L   +  +A ++A +  P+     R D L    
Sbjct: 152 MIVSGTPIGADEAYGAGLVDAVFEGD-LTTHAVNFAREMARKGGPFPPVRDRDDVLKETD 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A    + A L  K      P   AC   +   +       + +E  +F +LV  D SR 
Sbjct: 211 LAAFDAEAADLARKARGLEAPI--ACARAVRNAVTLPFDEALAEERALFVKLVASDQSRA 268

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             H+FFA+R  +K+P    +    R + +V VIG G MG GIA A       V L E + 
Sbjct: 269 QRHLFFAEREAAKLPGKDVV---KRRIARVGVIGAGTMGGGIAMAFANGGFPVTLLETSQ 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TIE N    V RG L++D     L   KG +D+++  D D+++EA  E + +
Sbjct: 326 EALRRGLATIEKNYTVSVARGSLSEDAKRQRLAQFKGTIDHADLADCDLIVEAAFEDMAV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K++IF +L+    P  ILATNTS +D++ +   TS    ++G HFFSPA+VM LLEIVR 
Sbjct: 386 KKEIFGKLDAVARPGAILATNTSYLDIDEIAASTSRPQDVLGLHFFSPANVMKLLEIVRA 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+T+   +  ++ + + I KV VVVG C GF  NR        +  L+  G    +ID A
Sbjct: 446 EKTAPDALATVIDLARRIGKVAVVVGVCHGFVGNRMLAVRGSESEALLLEGATPSQIDKA 505

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG P+GPFQ+ DLAG  +     K        R   + + D L + GR G+  G+G 
Sbjct: 506 FTDFGWPMGPFQMGDLAGLDIGWRNRKA-------RGLTAVIADTLCEQGRFGQKTGRGF 558

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  +I +      I+P     ++   EI+E  L+P+VNE  ++LE
Sbjct: 559 YLYENGSRTPVPDPEVEALIRDKAAEKGIVP----RTIDADEIIERTLYPLVNEGAKILE 614

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRF 538
           EGI  RASD+D   V G  FP  +GG +FWA   GA  +   L+ W +  G + FKP+  
Sbjct: 615 EGIAARASDIDVVWVNGYGFPIGKGGPMFWAGLEGAARIVGRLRYWHERTGKDVFKPAPL 674

Query: 539 LEERA 543
           LE  A
Sbjct: 675 LERMA 679


>gi|241663087|ref|YP_002981447.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia pickettii
           12D]
 gi|240865114|gb|ACS62775.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ralstonia pickettii
           12D]
          Length = 693

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 198/549 (36%), Positives = 295/549 (53%), Gaps = 15/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSL 59
           M++   +I SE+  K GL D ++  + L+  +  +AL  AA  K P +R     D+    
Sbjct: 152 MIVSGNAIPSEKLAKSGLFDQMIEGD-LMAGAIDFALKAAAEGKLPKLR-----DRKVEH 205

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              +  L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR
Sbjct: 206 DNPQGFLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTPESR 265

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L H FF +RA SK+P+V +     R V KVAVIG G MG GI+   +   I V + E  
Sbjct: 266 ALRHAFFGERAASKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETK 324

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N      +GKLTQ+K    + +L   L Y + KD D+VIEAV E + 
Sbjct: 325 QEALDRGVATIRKNYENSAKKGKLTQEKVEQRMALLTPTLSYDDIKDADLVIEAVFEEMG 384

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F +L++      ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 385 VKEVVFKKLDEVVKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEVVR 444

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D 
Sbjct: 445 GKETAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDK 504

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G
Sbjct: 505 AIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEMGRFGQKTGGG 563

Query: 420 LYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y+ G  KP P+  V  +I +  +   I        ++++EIVE ++F +VNE  ++L
Sbjct: 564 WYDYKAGDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKIL 619

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSR 537
           EEGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +K + 
Sbjct: 620 EEGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYSKGYHGEAWKVAP 679

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 680 LLQKLADEG 688


>gi|357024730|ref|ZP_09086872.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
           amorphae CCNWGS0123]
 gi|355543398|gb|EHH12532.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
           amorphae CCNWGS0123]
          Length = 689

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 196/551 (35%), Positives = 280/551 (50%), Gaps = 25/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  + GL+DAV   E + +  R +A ++ A+   ++    R D+LG   
Sbjct: 152 MIVSGAPIGAVEALEAGLVDAVFDGELVAQAVR-FASEMVAKGGRFLPVRDRNDRLGKTD 210

Query: 61  EA---REVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
            A   R+  +LA     K A  +    AC   +   I       +  E ++F +LV  D 
Sbjct: 211 LAAFDRQAAELA-----KKARGLEAPIACAQAVRNAISLSFDEALAAERELFLKLVAGDQ 265

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           SR   H+FFA+R  ++ P   D+    R + ++ +IG G MG GIA A       V L E
Sbjct: 266 SRAQRHLFFAEREAARGPG-KDVAR--RKITRIGIIGAGTMGGGIAMAFANGGFPVTLLE 322

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            N E L +G+ TI+ N    V RG LT+      L + KG  DY++  D D+++EAV E 
Sbjct: 323 TNEEALQRGLATIDKNYAVSVGRGSLTEAARQQRLGLFKGSTDYADLADCDLIVEAVFEE 382

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +KQ++F +L+    P  ILATNTS +D+N +   TS    ++G HFFSPA+VM LLEI
Sbjct: 383 MAVKQEVFGKLDAVAKPGAILATNTSYLDVNAIAASTSRPQDVVGLHFFSPANVMKLLEI 442

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR E+T+   +  ++ + + I KVPVVVG C GF  NR        +  L+  G    +I
Sbjct: 443 VRAEKTAPDALATVVELARGIGKVPVVVGVCHGFVGNRMLAARGAESEALLLEGATPSQI 502

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D     FG PIGPFQ+ DLAG  +     K        R   + + D L + GR G+  G
Sbjct: 503 DRVFTDFGWPIGPFQMGDLAGLDIGWRNRKA-------RGLTAVIADTLCEQGRFGQKTG 555

Query: 418 KGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
            G Y YE GS+ P PDP V  +I    R      G    ++   EI+E  L+P+VNE  +
Sbjct: 556 SGWYRYEDGSRDPSPDPEVENLI----RAKAAEKGIAARAIDADEIIERTLYPLVNEGAK 611

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKP 535
           +LEE I  RASD+D   V G  FP  +GG +FWA   GA  +   L+ W    G   FKP
Sbjct: 612 ILEEKIADRASDIDVVWVNGYGFPIGKGGPMFWAGLEGAGKIVERLEYWHGQTGKEVFKP 671

Query: 536 SRFLEERATKG 546
           +  L   A  G
Sbjct: 672 APLLRRFAETG 682


>gi|124266965|ref|YP_001020969.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Methylibium petroleiphilum PM1]
 gi|124259740|gb|ABM94734.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Methylibium petroleiphilum PM1]
          Length = 700

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 186/490 (37%), Positives = 265/490 (54%), Gaps = 12/490 (2%)

Query: 62  AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 121
           A    + AR  A   AP  P  + C+D++   +      G+  E   F  L++   SR L
Sbjct: 211 ADAYFQFARNTATAMAPQFPAPRKCIDMVAASVALPFDEGLRLEWSTFTALMLTPESRAL 270

Query: 122 VHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
            HVF A+RA  K+ +V  D  +  R V+++AVIG G MG GIA   +   + VV+ E   
Sbjct: 271 RHVFMAERAAGKIADVPADTPV--RSVKRLAVIGAGTMGGGIAMNFLNAGLPVVMLETKQ 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI  N    V +GKLT ++A   L +L   LDY++  D DMVIEAV E + +
Sbjct: 329 EALDRGVATIRRNYEAQVKKGKLTAERAEQRLGLLSTTLDYADLADADMVIEAVFEDLGV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F  L++   P  ILA+NTST+DLN +   T     +IG HFFSPA+VM LLE+VR 
Sbjct: 389 KEQVFRRLDEVMKPGAILASNTSTLDLNRIAAFTRRPQDVIGTHFFSPANVMKLLEVVRG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+T   V+  +M +GK I+K  VV G C GF  NR    Y + A LLV  G    ++D A
Sbjct: 449 EQTGKDVLATVMQLGKKIRKTCVVSGVCDGFIGNRMVEQYLRQAFLLVDEGSTPQQVDKA 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K      P   + S   DLL ++GR G+  G G 
Sbjct: 509 IERFGFAMGPFRMSDLAGNDIGWAIRKRRYAERPHMQY-SKTPDLLCETGRFGQKTGAGW 567

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+ G +   P P VL +IE  RR   I     P  + + EIVE +++ +VNE   +LE
Sbjct: 568 YDYQAGKRDAIPSPVVLELIEGHRRTLGI----TPRKIGDDEIVERLVYALVNEGAHLLE 623

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPS 536
           EGI  +A D+D   + G  FP +RGG +  AD VG   V  +++++         F++P+
Sbjct: 624 EGIAAKAGDIDMVYLTGYGFPLHRGGPMRHADEVGLFNVVRAMRRFQHNPLDDAAFWEPA 683

Query: 537 RFLEERATKG 546
             L   A  G
Sbjct: 684 PLLARLAADG 693


>gi|330817251|ref|YP_004360956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327369644|gb|AEA61000.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
           gladioli BSR3]
          Length = 694

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 188/548 (34%), Positives = 299/548 (54%), Gaps = 12/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++   ++ SE+  K GL D +   + LL+ +   A  + A+  P  R     D+     
Sbjct: 152 MIVSGAAVPSEQLAKSGLFDEMAEGD-LLEAAVALARRVGAKPGPHPRV---RDRKIEHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  AP  P    C+D IE G++ G   G++ E + F  LV    SR 
Sbjct: 208 NAAGFIQFARNSARAAAPQYPAPHKCIDAIEAGVLKGFDQGLIDEREGFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +RK+ VIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRKLGVIGAGTMGGGITINFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKL+++K    + ++   L Y + KD D++IEAV E + 
Sbjct: 326 QEALERGLATIRKNYEVQVKKGKLSEEKLEARMALISPTLSYEDLKDADLIIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRKLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      P+  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYLEQPELHY-SKIADRLCELGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y+ G + +  PS L  ++E     +   G +   + ++EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYQAGER-RAKPSKL--VDEMVLAYSKEAGVERRKIADEEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFKPSRF 538
           EGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++    G+ ++P+  
Sbjct: 622 EGIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRRYAAGANGDAWQPAPS 681

Query: 539 LEERATKG 546
           + + A  G
Sbjct: 682 IAKLAAAG 689


>gi|39936778|ref|NP_949054.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
 gi|39650635|emb|CAE29158.1| enoyl-CoA hydratase [Rhodopseudomonas palustris CGA009]
          Length = 699

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 187/548 (34%), Positives = 295/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GL++ VV  E L+  +  +A  + A ++P  R      KL +  
Sbjct: 152 MIVGGSPIGAAEALKHGLVEEVV--ENLVAGAVAFAKKVLAEKRPLRRLRDDDSKLAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K A  +    AC D I   I      G+ KE + F +LV+ D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +KV  V D G KPR V +VA+IG G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG L  D     + ++ G++     KD D++IEAV E++ +
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGLPPDAPAKRMALITGLVGLENVKDADLIIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ ++    P  +LA+NTS + ++ +   T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFTAVDAHAKPGAVLASNTSYLSIDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+   +L  +++ K I KVPVVVG C GF  NR     S+ +  L+  G    ++D+ 
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE+GS+ P PDP V  +I +   L+ +  G K   +T++EI+E +++P++NE  R+LE
Sbjct: 562 YKYEQGSRAPMPDPEVETLINDT--LAKL--GLKRRDITDEEILERMVYPMINEGARILE 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           E I  R SD+D   + G  +P YRGG + +AD+VG  ++   L  +++   +   +P+  
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERLSAYAKATNDPSLEPAPL 677

Query: 539 LEERATKG 546
           L   A +G
Sbjct: 678 LARLAAEG 685


>gi|410623226|ref|ZP_11334043.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
           ACAM 615]
 gi|410157148|dbj|GAC29417.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola pallidula DSM 14239 =
           ACAM 615]
          Length = 707

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 176/470 (37%), Positives = 262/470 (55%), Gaps = 18/470 (3%)

Query: 86  CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 145
           C+  ++    H   +G+ +EA++F E +    +R   H FFA+RA S V  ++   +K R
Sbjct: 240 CVLAVKAAFTHDFKAGLAREAELFMECMTTSQARAQQHFFFAERAASHVQGISR-DVKAR 298

Query: 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 205
            +++ AVIG G MG GIA       I V++ E+    L KG+  I  N      +GKLT 
Sbjct: 299 DIKQAAVIGAGTMGGGIAMNFANAGIPVIMLELQQAALDKGLALIRRNYENSAKKGKLTS 358

Query: 206 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 265
           ++    + +L G   Y++  D D+VIEAV E + +K+++FS L+K C P  ILA+NTST+
Sbjct: 359 EQVEQRMLLLTGTTSYADLSDADLVIEAVFEKMSVKKEVFSMLDKVCKPGAILASNTSTL 418

Query: 266 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 325
           DLN +    S    +IG HFFSPA+VM LLEIVR E+TS +VI   M + K I+KV V+V
Sbjct: 419 DLNEIAASISRPQDVIGLHFFSPANVMKLLEIVRGEKTSDEVIKTAMKLAKTIRKVGVLV 478

Query: 326 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA-- 383
           G C GF  NR   PY + A  L+  G    ++D  I  FGLP+GPF + D+AG  +    
Sbjct: 479 GVCFGFVGNRMIEPYGREANRLMLEGATPEQVDRVIGKFGLPMGPFTMGDMAGLDIGYFV 538

Query: 384 -ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPII-E 440
             + +EF    P       + D L+  GR G   GKG Y YE GS+ P PDP V+ +  +
Sbjct: 539 RESRREFIAHDPSYCI---VADKLVAQGRVGLKVGKGAYLYEHGSRHPIPDPDVIEMAKQ 595

Query: 441 ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 500
           E +RL     G +   ++++EI+E  ++P++NE   +L+EGI  ++SD+D   V G  FP
Sbjct: 596 EAKRL-----GIEQREISDQEILERCIYPLINEGADILKEGIAAKSSDIDVIYVYGYGFP 650

Query: 501 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FKPSRFLEERATKG 546
            +RGG + +AD +G   +   +  + +  G +    F PS  L E A  G
Sbjct: 651 VFRGGPMQFADEIGLKQIRERMNHYKETLGEYGQHWFTPSPLLNELADAG 700


>gi|346991676|ref|ZP_08859748.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Ruegeria sp. TW15]
          Length = 697

 Score =  309 bits (791), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 193/553 (34%), Positives = 294/553 (53%), Gaps = 23/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEE----LLKVSRLWALDIAARRKPWIRSLHRTDKL 56
           M+   + + + E  ++G++D V   +     L  V  L  L+  A R+P +  + +   +
Sbjct: 151 MITTGRHVQASEALQMGVLDKVQDGDPREIGLAFVRDL--LETGAPRRP-VCEMAKPTPI 207

Query: 57  GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
              +    VLK  R Q            +C         H   +G  +E ++F EL+  D
Sbjct: 208 DFDATYDAVLKKGRGQLSPAIAVRAVQASCE-------AHDFAAGQARERELFTELMASD 260

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
             +GL+H FFA+RA SK+P +   G+ PR + ++ V+GGG MG+GIAT+ +L  + VVL 
Sbjct: 261 QRKGLIHAFFAERAVSKLPELQ--GINPRELHQIGVVGGGTMGAGIATSALLAGLTVVLL 318

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDYSEFKDVDMVIEAVI 235
           E++ +        I AN+ G V RGKL+ D     L+  +    DY     VD+VIEAV 
Sbjct: 319 EMSVDAAKAAKDRIAANLAGAVKRGKLSPDAQEEILENRITLSTDYDGLSGVDLVIEAVF 378

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +K+++F++L+  C    +LATNTS +DLN +   T     +IG HFFSPAHVM LL
Sbjct: 379 EDMEIKKQVFAKLDATCKSGAVLATNTSYLDLNEIAASTGRPSDVIGLHFFSPAHVMKLL 438

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EIV  + T+ +VI     +GK + KV V  G C GF  NR    Y   A  +V  G   F
Sbjct: 439 EIVVADHTAPEVIATGFALGKRLGKVSVRAGVCDGFIGNRILNAYRTCADHMVLDGASPF 498

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVA-AATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
           +ID+A+  FG  +GPF + DLAG  +  AA  ++       R+ +S   D L ++G  G+
Sbjct: 499 QIDAALTRFGFAMGPFAVSDLAGLDIGWAARKRKRATGLDPRARESFYADKLCEAGHFGQ 558

Query: 415 ANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
             GKG Y YE G++  KP+P ++P+IE  R    I     P   T++EIV   +  +VNE
Sbjct: 559 KTGKGYYVYEPGNRSRKPNPEIMPLIEAERAAKGI----SPREFTDEEIVRRYMIAMVNE 614

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + +V+ EGI  R  D+D   + G  FP Y GG + WAD  G + V   +++WS     ++
Sbjct: 615 AAKVVGEGIARRPLDVDITLLYGYGFPRYWGGPLKWADLQGLSDVVDDIRRWSGEDPYYW 674

Query: 534 KPSRFLEERATKG 546
           +P+  LE+ AT+G
Sbjct: 675 QPAPLLEKLATEG 687


>gi|381393975|ref|ZP_09919693.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
           ACAM 611]
 gi|379330247|dbj|GAB54826.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola punicea DSM 14233 =
           ACAM 611]
          Length = 682

 Score =  308 bits (790), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 186/500 (37%), Positives = 275/500 (55%), Gaps = 18/500 (3%)

Query: 55  KLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 114
           KL S  E   + +  ++Q    A        C++ ++         G+ +E ++F+E + 
Sbjct: 183 KLSSSPEIEALCEQTKVQTSAKARGFFAPAKCIEAVKAAFELPFAQGLKREGELFEECMH 242

Query: 115 LDTSRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 173
              +R   H FFA+R    +P +  D  L  R +++VA+IG G MG GIA       I V
Sbjct: 243 TPQARAQQHFFFAERVAGALPQIAKDTAL--RDIKQVAIIGAGTMGGGIAMNFANVGIPV 300

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
           VL E+    L KG++ I  N      +GKLTQ++    +++L G   Y +  +VD+VIEA
Sbjct: 301 VLLELEQAALDKGLELIRRNYENSAKKGKLTQEQVEQRMELLTGTTSYDDLSEVDLVIEA 360

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + +K+++F  L+K C P  ILA+NTST+DL+ + + TS +  +IG HFFSPA+VM 
Sbjct: 361 VFEKMSVKKQVFEALDKVCKPGAILASNTSTLDLDEIAQCTSREQDVIGLHFFSPANVMK 420

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLEIV+  +T+  VI   M + K IKKV V+VG C GF  NR    Y + A  L+  G  
Sbjct: 421 LLEIVQGAKTADDVIKTAMHLAKTIKKVGVLVGVCFGFVGNRMIEVYGREAGRLMLEGAT 480

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAA---ATSKEFDKAFPDRSFQSPLVDLLLKSG 410
             +ID  I  FGLP+GPF + D+AG  +      + KEF    P       + D L+++G
Sbjct: 481 PQQIDKVIYDFGLPMGPFTMGDMAGLDIGYFVRQSRKEFISHDPSY---CTVADELVEAG 537

Query: 411 RNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
           R G   GKG+Y Y+ GS+ P PDPSVL I +  R+   +  G +   ++++EI+E  ++P
Sbjct: 538 RVGLKAGKGVYLYDAGSRSPIPDPSVLDIAK--RKAKEL--GIQRRDISDQEILERCIYP 593

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE   +L EGI  RASD+D   V G  FP YRGG + +AD +G   V   +K +    
Sbjct: 594 LINEGANILLEGIAQRASDIDVIYVYGYGFPVYRGGPMKFADEIGVKEVLARMKHYETAL 653

Query: 530 GNF----FKPSRFLEERATK 545
           G +    F PS  LEE A K
Sbjct: 654 GEYGKHWFTPSPLLEELAQK 673


>gi|121594055|ref|YP_985951.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Acidovorax sp. JS42]
 gi|120606135|gb|ABM41875.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
          Length = 699

 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 188/513 (36%), Positives = 277/513 (53%), Gaps = 14/513 (2%)

Query: 18  LIDAVVTSEELLKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E L    L +A  +A  R  P +R+L          E     + AR   K 
Sbjct: 172 LFDKMAASPESLAEEALAFAQSVADVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E ++F  L+    SR L H+FFA+RA SK+P
Sbjct: 227 MAKNFPAPAKCVDAVEAATKRKFADGLAYERELFINLMWTPESRALRHLFFAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V     K R ++KV VIG G MG GI+   +   I V + E+  E L +GI TI+ N  
Sbjct: 287 DVPSETPK-RDIKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIGTIQKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL +DK    + +L   L+Y++ KD D++IEAV E + +K+ +F +L+    P 
Sbjct: 346 AQVKKGKLKEDKYQQRMALLSTTLNYADLKDCDLIIEAVFEELGVKEAVFKQLDAVAKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+  V+  +M + 
Sbjct: 406 AILASNTSTLDVDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMALA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    YSQ A  L+  G    ++D AI  FG  +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ G +   P   
Sbjct: 526 LAGNDIGWAIRKRRAVEQPDMKY-SKTADLLCEMGRFGQKTGAGWYDYQAGKRDAIPSDV 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V  +IEE R+   I P      V+++EIV+ +++ +VNE  ++LEEGI  ++ D+D   +
Sbjct: 585 VNQMIEEHRKALGITPR----KVSDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            G  FP +RGG + +A  VG   V  S+K++++
Sbjct: 641 TGYGFPIHRGGPMHYASEVGLFNVVQSMKRFAR 673


>gi|300691451|ref|YP_003752446.1| fused 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
           [Ralstonia solanacearum PSI07]
 gi|299078511|emb|CBJ51166.1| fused 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
           [Ralstonia solanacearum PSI07]
          Length = 693

 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 194/548 (35%), Positives = 288/548 (52%), Gaps = 13/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++   +I SE+  K GL D ++  + +           A  + P +R     D+     
Sbjct: 152 MIVSGTAIPSEKLAKSGLFDQMIEGDLMAGAIAFAQKAAADGKLPKLR-----DRKVEHD 206

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR 
Sbjct: 207 NPEGFLQFARNTVAAVAKNFPAPGKCIDAVQAAVEKRFDDGIQFERVLFIELVNTTESRA 266

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V +     R V  VAVIG G MG GI+   +   I V L E   
Sbjct: 267 LRHAFFGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGISMNFLNAGIPVTLLETRQ 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +GI TI  N      +GKLTQ+K    + +LK  L Y + KD D+VIEAV E + +
Sbjct: 326 EALDRGIATIRKNYENSAKKGKLTQEKVEEFMALLKPTLSYDDIKDADLVIEAVFEDMGV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 386 KETVFKTLDEVVKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVRG 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A
Sbjct: 446 KATAKDVLATVMKIAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRA 505

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G 
Sbjct: 506 VEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIIY-SKTADLLCEKGRFGQKTGAGW 564

Query: 421 YTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+ G  KP P   V  +I +  +   I        ++++EIVE +++ +VNE  ++L+
Sbjct: 565 YDYKAGDRKPYPSQEVNDMIVQHSKALGIT----RRKISDEEIVERLVYALVNEGAKILD 620

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRF 538
           EGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +KP+  
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVVQAMHRYSKGYQGEAWKPAPL 680

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 681 LQKLAGEG 688


>gi|444371965|ref|ZP_21171470.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           cenocepacia K56-2Valvano]
 gi|443594373|gb|ELT63030.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           cenocepacia K56-2Valvano]
          Length = 694

 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 187/527 (35%), Positives = 287/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +   + LL  +  +A  + A++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDEMADGD-LLDAAVAFARKVGAQKGPHPRV---RDRKIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E + F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNYPAPHKCIDAIEAGVLNGFDKGSVAEREGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  L  R +R+V VIG G MG GIA   I   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPL--REIRRVGVIGAGTMGGGIAMNFINAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ+K +  + ++   L   + KD D+++EAV E + 
Sbjct: 326 QDALERGLATIRKNYDAQVKKGKLTQEKLDARMALITPTLSCDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKKLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      P   + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPGLQY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVPGDR-KAKPSSL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYA 668


>gi|301631451|ref|XP_002944811.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
           tropicalis]
          Length = 735

 Score =  308 bits (788), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 190/533 (35%), Positives = 282/533 (52%), Gaps = 21/533 (3%)

Query: 26  EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 85
           EE L  +R  A    AR  P +R+L          E     + AR   K  A N+P    
Sbjct: 185 EEALAFARSVA---DARPLPLVRNLPCQH-----PEGDAYFQFARNMVKGMAKNVPAPAK 236

Query: 86  CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 145
           C+D +E         G+  E ++F  L+    SR L H+F A+RA SK+ +V     + R
Sbjct: 237 CVDAVEAATRRKFTDGLAYERELFIHLMWTPESRALRHLFLAERAASKISDVPADTPR-R 295

Query: 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 205
            V+KV VIG G MG GI+   +   I V + E+  E L +GI TI  N    V +GKL +
Sbjct: 296 DVKKVGVIGAGTMGGGISMNFLNAGIPVTILEMQQEALERGIATIRKNYEAQVKKGKLKE 355

Query: 206 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 265
           DK    + +L   L Y + KD D++IEAV E++ +K+++F +L+    P  ILA+NTST+
Sbjct: 356 DKYQQRMALLSSTLSYDDLKDCDLIIEAVFENLSVKEQVFKQLDAVMKPGAILASNTSTL 415

Query: 266 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 325
           D++ +   T     ++G HFFSPA+VM LLE+VR  RT   V+  +M + K I+KV VV 
Sbjct: 416 DVDKIAAFTQRPQDVVGLHFFSPANVMKLLEVVRGARTGKDVMATVMAMAKKIRKVAVVS 475

Query: 326 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 385
           G C GF  NR    Y +    L+  G    ++D AI  FG  +GPF++ DLAG  +  A 
Sbjct: 476 GVCDGFIGNRMIEQYGRQGGFLLDEGCTPAQVDKAIEKFGFAMGPFRMGDLAGNDIGWAI 535

Query: 386 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRR 444
            K   +  PD  + S   DLL + GR G+  G G Y Y    +   P   V+ +IEE R+
Sbjct: 536 RKRRYQEKPDMKY-SKTADLLCEKGRFGQKTGAGWYDYAAARRDAIPSAEVVQMIEEHRK 594

Query: 445 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 504
              I P      ++++EIV+ ++F +VNE+  +LEEGI  +ASD+D   + G  FP +RG
Sbjct: 595 ALGITPR----KISDEEIVQRLVFALVNEAAHILEEGIANKASDIDVVYIFGYGFPVHRG 650

Query: 505 GIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLSAPVS 554
           G + +A+ VG   V  ++K+++Q       F++P+  L     +G   S PV 
Sbjct: 651 GPLNYANEVGLFNVAAAMKRFAQNPLDDARFWQPAPLLARLVAEG---SQPVQ 700


>gi|17546478|ref|NP_519880.1| trifunctonal enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Ralstonia
           solanacearum GMI1000]
 gi|17428776|emb|CAD15461.1| probable trifunctonal: enoyl-coa hydratase and
           delta3-cis-delta2-trans-enoyl-coa isomerase and
           3-hydroxyacyl-coa dehydrogenase oxidoreductase protein
           [Ralstonia solanacearum GMI1000]
          Length = 706

 Score =  307 bits (787), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 198/550 (36%), Positives = 291/550 (52%), Gaps = 17/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSL 59
           M++   ++ SE+  K GL D ++  + L+  +  +AL  AA  K P +R     D+    
Sbjct: 165 MIVSGTAVPSEQLAKSGLFDQMIEGD-LMAGAIGFALKAAAEGKLPKLR-----DRKVEH 218

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
                 L+ AR      A N P    C+D ++  +      G+  E  +F  LV    SR
Sbjct: 219 DNPEGFLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIRFERDLFIALVNTTESR 278

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L H FF +RA SK+P+V +     R V  VAVIG G MG GIA   +   I V + E  
Sbjct: 279 ALRHAFFGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGIAMNFLNAGIPVTILETK 337

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +GI TI  N      +GKLT  K    + +LK  L Y + +D D+VIEAV E + 
Sbjct: 338 QEALDRGIATIRKNYESSAKKGKLTPGKVEARMALLKPTLSYDDIRDADLVIEAVFEDMG 397

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F  L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 398 VKETVFKTLDAVAKPGAILASNTSTLDVDRIAGFTQRPQDVVGMHFFSPANVMKLLEVVR 457

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D 
Sbjct: 458 GKATAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDR 517

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+ +FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G
Sbjct: 518 AVETFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRYGQKTGAG 576

Query: 420 LYTYEKGS-KPKPDPSVLP-IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
            Y Y+ G  KP P   V   II+  + L     G     ++++EIVE ++F +VNE  ++
Sbjct: 577 WYDYKAGDRKPYPSQEVNDMIIQHSKDL-----GITRRKISDEEIVERLVFALVNEGAKI 631

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPS 536
           LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  +++++ + Y G  +KP+
Sbjct: 632 LEEGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMRRYGKGYHGEAWKPA 691

Query: 537 RFLEERATKG 546
             L++ A  G
Sbjct: 692 PLLQKLADAG 701


>gi|259415983|ref|ZP_05739903.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
 gi|259347422|gb|EEW59199.1| peroxisomal bifunctional enzyme [Silicibacter sp. TrichCH4B]
          Length = 696

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 181/543 (33%), Positives = 292/543 (53%), Gaps = 14/543 (2%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + I+++E  K G+ID +  + ++ ++   +A ++ A       +  RT +L     A EV
Sbjct: 157 RQISADEALKTGVIDRISDTSDIREMGLTYARELVASGA----TPRRTSELSPAPVAAEV 212

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
              AR +  K A      Q C+  +E         G+  E  +F+EL+  D    L+H F
Sbjct: 213 FDAARTRLAKKARGQLAPQNCIKAVESATHLSFAEGLANERALFQELMESDQRAALIHAF 272

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           FA+R  +KVP + D+   PR + ++ VIGGG MG+GIA + +L  + V L E +++ + +
Sbjct: 273 FAERQVAKVPEIKDVA--PRAIDQIGVIGGGTMGAGIAVSALLAGLQVTLIERDADAVAR 330

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
               +   +RG V RGKL+Q+K +  +    +   DY+   + D+VIEAV ES+ +K+ +
Sbjct: 331 AEANVSKTLRGSVKRGKLSQEKYDAIMGGTFRASDDYATLAEADVVIEAVFESMEVKKDV 390

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F++L+  C P  +LA+NTS +D+N +   TS  + +IG HFFSPAHVM LLEIV  ++T+
Sbjct: 391 FTKLDAICKPGAVLASNTSYLDVNEIAAMTSRPEDVIGLHFFSPAHVMRLLEIVVADKTA 450

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
            +V      + K +KKV V  G C GF  NR    Y ++    V  G   F +D A+ +F
Sbjct: 451 PEVTATGFALAKRLKKVAVRAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEVDRALVNF 510

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY- 423
           GL +GP+ + DLAG  +  AT K        R   +   D L ++G  G+  GKG Y Y 
Sbjct: 511 GLAMGPYAVSDLAGLDIGWATRKRLAPTRDPREVYAEFADRLCEAGHFGRKAGKGFYVYG 570

Query: 424 EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIV 483
           E+G  P  +  VL  I   R    I        ++E+EIV+  +  +VNE+ RV+EEGI 
Sbjct: 571 EEGQVPNDE--VLEHIATERAAKGIAAR----EISEQEIVDRYMAAMVNEAARVVEEGIA 624

Query: 484 VRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 543
           +R  D+D   + G  FP +RGG + +AD VG + +   +++++Q     ++P+  L+   
Sbjct: 625 LRPLDVDVTLLNGYGFPRWRGGPMQYADTVGLDKILADIERFAQEDDFLWQPASLLKRLV 684

Query: 544 TKG 546
            +G
Sbjct: 685 AEG 687


>gi|344174706|emb|CCA86516.1| fused 3-hydroxybutyryl-CoA
           epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
           dehydrogenase [Ralstonia syzygii R24]
          Length = 693

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 193/548 (35%), Positives = 287/548 (52%), Gaps = 13/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++   +I SE+  K GL D ++  + +           A  + P +R     D+     
Sbjct: 152 MIVSGTAIPSEKLAKSGLFDQMIDGDLMAGAIAFAQKAAADGKLPKLR-----DRKVEHD 206

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR 
Sbjct: 207 NPEGFLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIRFERALFIELVNTTESRA 266

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V +     R V  V VIG G MG GI+   +   I V L E   
Sbjct: 267 LRHAFFGERAASKIPDVPE-DTPVRKVETVVVIGAGTMGGGISMNFLNAGIPVTLLETRQ 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +GI TI  N      +GKLTQ+     + +LK  L Y + KD D+VIEAV E + +
Sbjct: 326 EALDRGIATIRKNYENSAKKGKLTQETVEERMALLKPTLSYDDIKDADLVIEAVFEDMGV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 386 KETVFKQLDEVVKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVRG 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A
Sbjct: 446 KATAKDVLATVMKIAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRA 505

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G 
Sbjct: 506 IEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGW 564

Query: 421 YTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+ G  KP P   V  +I +  +   I        ++++EIVE +++ +VNE  ++L+
Sbjct: 565 YDYKAGDRKPYPSQEVNDMIVQHSKALGIT----RRKISDEEIVERLVYALVNEGAKILD 620

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRF 538
           EGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +KP+  
Sbjct: 621 EGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVVQAMHRYSKGYQGEAWKPAPL 680

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 681 LQKLAGEG 688


>gi|13473557|ref|NP_105125.1| enoyl-CoA hydratase [Mesorhizobium loti MAFF303099]
 gi|14024307|dbj|BAB50911.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Mesorhizobium
           loti MAFF303099]
          Length = 689

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 191/548 (34%), Positives = 280/548 (51%), Gaps = 19/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I ++E  + GL+DAV   + L   +  +A +IA +  P+     R ++LG   
Sbjct: 152 MIVSGTPIGADEAHEAGLVDAVFEGD-LTTHAVNFAGEIARKGGPFTPVRDRDERLGETD 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A    + A L  K      P   AC   +   +       +  E  +F +LV  D SR 
Sbjct: 211 LAAFDAEAADLARKARGLEAPV--ACAQAVRNAVTLPFDEALAAERALFVKLVASDQSRA 268

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             H+FFA+R  +K+P         R + +V VIG G MG GIA A       V L E ++
Sbjct: 269 QRHLFFAEREAAKLPAKDTY---KRRIARVGVIGAGTMGGGIAMAFANGGFSVTLLETSA 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TIE N    V+RG L +D  +  L   KG  DY++  + D++IEAV E + +
Sbjct: 326 EALQRGLGTIEKNYAVSVSRGSLAEDAKHQRLAQFKGSTDYADLAECDLIIEAVFEDMAV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L+    P  ILATNTS +D+N +    S    ++G HFFSPA+VM LLEIVR 
Sbjct: 386 KKEVFGKLDAVAKPGAILATNTSYLDINEIAGSISRPQDVLGLHFFSPANVMKLLEIVRA 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   +  ++ + + I KV VVVG C GF  NR        +  L+  G    +ID A
Sbjct: 446 DKTAPDALATVIDLARRIGKVAVVVGVCHGFVGNRMLAARGSESEALLLEGATPSQIDKA 505

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG P+GPFQ+ DLAG  +     K        R   + + D L + GR G+  G+G 
Sbjct: 506 FTDFGWPMGPFQMGDLAGLDIGWRNRKA-------RGLTAVIADTLCEQGRFGQKTGRGF 558

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE G++   PDP V  +I +      I     P +++  EI+E  L+P+VNE  ++LE
Sbjct: 559 YLYEAGARAGIPDPEVEALIRDKAAERGI----APRAISADEIIERTLYPLVNEGAKILE 614

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRF 538
           E I  RASD+D   V G  FP  +GG +FWA   GA  +   L  W Q  G + FKP+  
Sbjct: 615 EKIAARASDIDVVWVNGYGFPIGKGGPMFWAGLEGAAKIVQRLDHWHQRTGKDVFKPAPL 674

Query: 539 LEERATKG 546
           L+  A  G
Sbjct: 675 LKRMAETG 682


>gi|221067466|ref|ZP_03543571.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           KF-1]
 gi|220712489|gb|EED67857.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           KF-1]
          Length = 706

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 190/550 (34%), Positives = 296/550 (53%), Gaps = 14/550 (2%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK--PWIRSLHRTDKLGSLSEAR 63
           K + ++E  +LGL+DA+   ++L + S ++AL +A      P +  +      G L +  
Sbjct: 168 KHVEAKEALELGLVDAIF-EDDLEQASLMFALSMADSHPALPVLADIQAPPPKGELPD-- 224

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                 R      A N    +A +  +   +      G+ KE ++F+ELV+   S+ L H
Sbjct: 225 --FDRLRTGINPKARNAIAQRAAIQCVRSAMDLPFEQGLDKERELFEELVVGAPSKSLRH 282

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +FFA++  +K     D  +  R + +V ++G G MG GIA A     I VVL E     L
Sbjct: 283 IFFAEKEAAKFVG-RDCDVAERQICRVGILGAGTMGGGIAMAFANAGIPVVLCEREQAAL 341

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+  IE N +  V+RG LT +     ++ ++  LD S F +VD+VIEAV E + +K+ 
Sbjct: 342 DRGMAMIERNYQISVSRGGLTAEAVKERMQHIQQTLDLSAFAEVDLVIEAVFEDMAIKRD 401

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F +L++ C    ILATNTS +++N +   T   + +IG HFFSPA+VM LLE+VR ERT
Sbjct: 402 VFVQLDRICRKGTILATNTSRLNINEIAAVTQRPEDVIGLHFFSPANVMKLLEVVRGERT 461

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
              VI   M +   I K+PV+VG C GF  NR    Y + A  L+  G  V +ID+A+++
Sbjct: 462 CDAVIASCMQMAVAIGKIPVLVGVCEGFVGNRMLTGYWREAGFLLEEGATVQQIDAAMQA 521

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 423
           FG  +GP  + DLAG  +  AT K            S + D + + GR G+  G G Y Y
Sbjct: 522 FGFAMGPLAMADLAGLDINWATRKRLASTRASHLRYSRVADSICEQGRFGQKTGAGYYRY 581

Query: 424 EKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
           E G++ P PDP V  +I EC R++ I    +   V ++EIVE  +  +VNE  R+++EGI
Sbjct: 582 EAGNRTPVPDPFVEALIAECARVAGI----ERRRVRDEEIVERCVLALVNEGARIVDEGI 637

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEER 542
             RASD+D   V G  FP++RGG +F A ++G   V   ++     +G  +  + ++E++
Sbjct: 638 AQRASDVDVVYVNGYGFPAWRGGPMFHAQSLGWTQVLAKIRDLHARHGEHWIVAPWIEQQ 697

Query: 543 ATKGIPLSAP 552
           A   I L+ P
Sbjct: 698 ALNDI-LAQP 706


>gi|312115608|ref|YP_004013204.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220737|gb|ADP72105.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 695

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 186/539 (34%), Positives = 289/539 (53%), Gaps = 21/539 (3%)

Query: 16  LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT---DKLGSLSEAREVLKLARLQ 72
           +GL+D VV  + L     L        + P  R L      D+   L E R      R +
Sbjct: 168 IGLVDEVVDGDILPAAIALAKSKSFLSKHPKTRELSAKIAPDRGSHLFEGR------RDE 221

Query: 73  AKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131
            ++  P       C+D IE   VH  +S G+ +E ++F E +  D S+ L+H FFA+R  
Sbjct: 222 LRRRQPFQHAQFRCVDAIESA-VHLPFSQGLKRERELFNEALDDDQSKALIHAFFAEREA 280

Query: 132 SKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190
           +K+P   TD+  +PR ++ VAV+G G MG GIA A       V++ + +   L +G+  +
Sbjct: 281 AKIPGFRTDV--RPREIKSVAVVGSGHMGGGIAMAFANAGFPVIVLDRDQAALSRGLAVV 338

Query: 191 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 250
             N   +V RG+L Q   N  L  ++  ++Y +  DVD+V+EA  E + +K+++F +L++
Sbjct: 339 AKNYESMVRRGRLDQPGMNKRLSAIRSTVNYKDLADVDLVVEAAFEDIGVKEQVFRDLDR 398

Query: 251 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 310
           AC    I A+NTST+D++ +   T     +IG HFFSPA+V  L+E+VR + TSA V+  
Sbjct: 399 ACKKGAIFASNTSTLDIDEIASFTRRPGDVIGTHFFSPANVQRLVEVVRGKETSADVLAT 458

Query: 311 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 370
            M V K I K+ V VGNC GFA NR    Y   A +++  G     +D+A+  +GL +GP
Sbjct: 459 AMAVAKKIGKIGVAVGNCDGFAGNRMLEKYVTEAMIILEEGATPAEVDTALTRWGLAMGP 518

Query: 371 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-P 429
           F + DL G  V     +   K    + + S L+D    +GR G+  GKG Y YE GS+ P
Sbjct: 519 FAVFDLTGIDVNWHIRQRRLKQ--GKPYGSALLDRFYDAGRFGQKTGKGFYRYETGSRAP 576

Query: 430 KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 489
            PDP    IIE  RR      G +  SV+E+EIV+  ++ +VNE   +L+EG+V R+ D+
Sbjct: 577 LPDPEADAIIEAYRREV----GPRVKSVSEQEIVKRTIYALVNEGANILDEGVVYRSGDI 632

Query: 490 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIP 548
           D   + G  FP++RGG + +A+  G   V + L  +   +G+ ++P+  L+   T   P
Sbjct: 633 DTIYINGYGFPAWRGGPMKYAELRGLAEVLSDLDIFHMRFGDRWRPAALLKSLVTARKP 691


>gi|260219460|emb|CBA26305.1| Peroxisomal bifunctional enzyme [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 707

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 189/526 (35%), Positives = 279/526 (53%), Gaps = 18/526 (3%)

Query: 25  SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 84
           +EE L  +R  A D+  R  P +R L      G         + AR   K  + N P   
Sbjct: 192 AEEALAFARSVA-DV--RPLPLVRDLKCKHPQGD-----AYFQFARNMVKGMSKNFPAPA 243

Query: 85  ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 144
            C+DV+E         G+  E + F  L+    S+ L H+F A+RA SK+ +V       
Sbjct: 244 KCVDVVEAATKKKFDEGMQVEREAFINLMFTAESKSLRHLFLAERAASKIADVPS-DTPQ 302

Query: 145 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 204
           R +  VAVIG G MG GIA   +   I V + E+  E L +GI TI  N    V + KL 
Sbjct: 303 RAINSVAVIGAGTMGGGIAMNFLNAGIPVKMLEMKQEALDRGIATIRKNYEAQVVKKKLK 362

Query: 205 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264
           QDK    + +L   L Y +    DMVIEAV E + +K+ +F EL++   P  ILA+NTST
Sbjct: 363 QDKYEQRMSLLSTTLSYDDLTGTDMVIEAVFEELGVKEAVFKELDRVMKPGAILASNTST 422

Query: 265 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 324
           +D+N +   T   + ++G HFFSPA+VM LLE+VR E+T+  V+  +M+V K IKK  VV
Sbjct: 423 LDVNKIANFTQRPEDVVGLHFFSPANVMKLLEVVRGEKTAKDVMATVMSVAKKIKKTAVV 482

Query: 325 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 384
            G C GF  NR    Y +    L+  G    ++D A+  FG+ +GPF++ DLAG  +  A
Sbjct: 483 SGVCDGFIGNRMIEQYGRQGGFLLDEGCTPEQVDKAMERFGMAMGPFRMGDLAGNDIGWA 542

Query: 385 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 443
             K      P   + S   DLL + GR G+  G G Y Y  G +   P+  V+ +IEE R
Sbjct: 543 IRKRRYLEKPHMKY-SKTADLLCEKGRFGQKTGAGWYDYVPGKRDAIPNAEVVAMIEEHR 601

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
           +   I P      ++++EIV+ ++F +VNE+  +LEEGI  +ASD+D   + G  FP++R
Sbjct: 602 KALGITPR----KISDEEIVQRLVFSLVNEAAHILEEGIAAKASDIDIVYIFGYGFPAHR 657

Query: 504 GGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
           GG + +AD VG   V  ++ +++Q       F++P+  L + A +G
Sbjct: 658 GGPMNYADEVGLFNVVQAMNRFAQNPLDDAKFWQPAPLLAKLAAEG 703


>gi|319780809|ref|YP_004140285.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317166697|gb|ADV10235.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 688

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 194/548 (35%), Positives = 282/548 (51%), Gaps = 19/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E    GL+DAV   + L   +  +A +IA +  P+     R + L    
Sbjct: 152 MIVSGAPIGATEAHAAGLVDAVFEGD-LTTHAVNFAGEIARKGGPFTPVRDRNEGLKQAD 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ A L  K      P   AC   +   +     + +  E  +F +LV  D SR 
Sbjct: 211 LAAFDVEAADLARKARGLEAPI--ACAQSVRNAVTLPFDAALAAERALFVKLVASDQSRA 268

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             H+FFA+R  +K+P   DI    R + +V VIG G MG GIA A       V+L E + 
Sbjct: 269 QRHLFFAEREAAKLPG-KDI--VKRRIARVGVIGAGTMGGGIAMAFANGGYSVILLETSH 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI+ N    VTRG L++D     L   KG  DY +  D D+++EAV E + +
Sbjct: 326 EALQRGLATIDRNYSVSVTRGSLSEDAKRQRLAQFKGSTDYVDLADCDLIVEAVFEDMAV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +LE    P  ILATNTS +D+N +   TS    ++G HFFSPA+VM LLEIVR 
Sbjct: 386 KKEVFGKLEAVAKPGAILATNTSYLDINEIAGSTSRPQDVLGLHFFSPANVMKLLEIVRA 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+T+   +   + + + I KV VVVG C GF  NR        +  L+  G    +ID  
Sbjct: 446 EKTAPDALATSVDLARRIGKVAVVVGVCHGFVGNRMLAARGSESEALLLEGATPSQIDQV 505

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG P+GPFQ+ DLAG  +     K        R  ++ + D L + GR G+  G+G 
Sbjct: 506 FTDFGWPMGPFQMGDLAGLDIGWRNRKA-------RGQKAVIADTLCEQGRFGQKTGRGF 558

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE G++ P PDP V  +I +    + I     P +++ +EIVE  L+P++NE  ++LE
Sbjct: 559 YLYEAGARTPVPDPEVEALIRDKAAENGI----APRAISAEEIVERTLYPLINEGAKILE 614

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRF 538
           EGI  RASD+D   V G  FP  +GG +FW    G   +   L+ W Q  G + FKP+  
Sbjct: 615 EGIAARASDIDVVWVNGYGFPIGKGGPMFWVGLEGPARIIERLEYWHQRTGKDVFKPAPL 674

Query: 539 LEERATKG 546
           L+  A  G
Sbjct: 675 LKRMAETG 682


>gi|217421439|ref|ZP_03452943.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           576]
 gi|217395181|gb|EEC35199.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           576]
          Length = 694

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 191/528 (36%), Positives = 282/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+V+  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEVAVAFARKAGAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|402566295|ref|YP_006615640.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
 gi|402247492|gb|AFQ47946.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
          Length = 694

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 185/527 (35%), Positives = 283/527 (53%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL D +   + LL  +  +A  +  ++ P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLASSGLFDEMADGD-LLDAAVAFARKVGTQKGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G+++G   G + E   F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSAQAAAPNFPAPHKCIDAIEAGVLNGFDKGSVAERDGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+V VIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVIGAGTMGGGIAMNFVNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ K +  + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QDALDRGLATIRKNYDAQVKKGKLTQQKLDARMALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGRLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GAQTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLQY-SKIADRLCEQGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + K  PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVPGER-KAKPSAL--VDEMVVAYSKERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADMVGLYNVERAIRRYA 668


>gi|221236228|ref|YP_002518665.1| multifunctional enoyl-CoA
           hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase
           [Caulobacter crescentus NA1000]
 gi|220965401|gb|ACL96757.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase
           [Caulobacter crescentus NA1000]
          Length = 696

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 183/546 (33%), Positives = 287/546 (52%), Gaps = 14/546 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + ++    +GL D +V   +L + +  +A  + A  +P  +     +K+ +  
Sbjct: 159 MVTTGQHVPAKAAHAMGLFDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAAR 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+ +  R    K        +  +  IE  +      G+  E K+F EL+    S  
Sbjct: 219 GKPEIFEAFRKANAKKFRGFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAA 278

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             +VFFA+R  +K+P+V D       V+KV VIG G MG GIA   +   I V + E   
Sbjct: 279 QRYVFFAERQAAKIPDVPD-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQ 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  I  N      +G+LTQD     + +L   ++     D DM+IEAV E + +
Sbjct: 338 ENLERGVGIIRKNYENTAKKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEI 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F++L+K   P  ILATNTS +D++ +   TS  + +IG HFFSPA+VM LLE+VR 
Sbjct: 398 KKEVFTKLDKIAKPGAILATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRG 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS  VI   M + K I KVPV+VG C GF  NR      + A+ L+  G   + +D  
Sbjct: 458 DKTSKDVIATCMKLSKTIGKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRV 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FGLP+GPF + DLAG  +       +D   P ++  S + ++L +  R G+ NGKG 
Sbjct: 518 LYDFGLPMGPFAMSDLAGLDIG------WD---PAKTSSSTVREVLCEMDRRGQKNGKGF 568

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++    KP P V  +I +      I    +   +T++EI+E  L+P+VNE  ++LEE
Sbjct: 569 YDYDENRNAKPSPVVEEVIRDFAEKRQI----QRREITDQEILERCLYPMVNEGAKILEE 624

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G  +RASD+D   + G  +P Y GG +FW + VG + V   +K++    G+ FKPS  LE
Sbjct: 625 GKAIRASDIDIVWINGYGWPVYSGGPMFWGELVGLDKVLAKMKQFHAELGDDFKPSALLE 684

Query: 541 ERATKG 546
               +G
Sbjct: 685 RLVAEG 690


>gi|390450411|ref|ZP_10236003.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
 gi|389662484|gb|EIM74046.1| enoyl-CoA hydratase [Nitratireductor aquibiodomus RA22]
          Length = 690

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 191/550 (34%), Positives = 297/550 (54%), Gaps = 22/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG-SL 59
           M++  K I  +E  +LG +D V  S+ LL  +  +A D+AA +KP I    R++KL   L
Sbjct: 152 MIVSGKPIGMDEAVRLGAVDRVAESD-LLAEAVAFARDMAASKKPHIHIRARSEKLAIDL 210

Query: 60  SEAREVLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           +   E +K+A  +A+  TAP    H A  + +   I     + + +E ++F E    + S
Sbjct: 211 AAFDEAVKVATKKARGLTAP----HTAA-EAVRNAITMEFDAALDRERELFLERRDSEES 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
               H+FFA R  ++VP +     + R + +  VIG G MG+GIA A     I V + E+
Sbjct: 266 AAQRHLFFATREATRVPGIPR-ETEARKIARAGVIGAGTMGAGIAMALANGGIPVTILEM 324

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + + +G+  I+    G + RG +T ++       + G   Y++  D D+VIEAV E +
Sbjct: 325 NEDAIARGLAHIDKTYAGSLKRGSITAEEKEARTGRISGTTHYADLADCDIVIEAVFEEM 384

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+++F+ L+    P  ILA+NTS +D+N +   T     ++G HFFSPAHVM LLEIV
Sbjct: 385 GVKRQVFTALDGMLKPGAILASNTSYLDVNEIAATTKRPQDVVGLHFFSPAHVMKLLEIV 444

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E T+  VI   + + + I KVPVVVG C GF  NR      +    L+  G    ++D
Sbjct: 445 RGEETAPDVIKTALALARKIGKVPVVVGVCNGFVGNRMLAARREQNEDLLLSGATPEQVD 504

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
                FG P+GPFQ++DLAG  ++        K    +   +P+ D L ++G  G+  G+
Sbjct: 505 RVFTDFGWPMGPFQMVDLAGLDISW-------KHRQSQGLTAPIGDTLCEAGHFGQKTGR 557

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y YE+GS+ PKPDP V  +IE  ++ + +  G +   ++  EI E  L+P++NE  ++
Sbjct: 558 GFYLYEEGSRTPKPDPFVQELIE--KKAAEL--GVERREISADEITERTLYPMINEGAKI 613

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPS 536
           LEE I  RASD+D   V G  FP  +GG +FWA+  G   +   L+ W +  GN  F+P+
Sbjct: 614 LEERIAARASDIDVVWVNGYGFPVAKGGPMFWAERFGIKTIVERLEHWHRKTGNRVFEPA 673

Query: 537 RFLEERATKG 546
             L + A  G
Sbjct: 674 PILRQLALTG 683


>gi|429218881|ref|YP_007180525.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
           19664]
 gi|429129744|gb|AFZ66759.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus peraridilitoris DSM
           19664]
          Length = 703

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/560 (32%), Positives = 309/560 (55%), Gaps = 12/560 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I++E+  + GLID ++  + L    +       +   P IR   R  KL    
Sbjct: 153 MIVTGNPISAEKAHEFGLIDELIEGDLLEGAVQFAQRAGESGELPKIRD--RDVKLDI-- 208

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A     +A  + +K A  +     CL+ ++  +      G+ +E ++F +    D SRG
Sbjct: 209 PAHMFFNVATERVRKEARGLIAPLLCLEAVKGAVELPFDEGLQREGELFLQAQRSDQSRG 268

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R  +K+ N  D  +KPR +R   V+G G MG GIA       I V + E N+
Sbjct: 269 LRHIFFAEREAAKI-NGVDRSVKPREIRSAGVLGAGTMGGGIAMNFANAGIPVTIYEANA 327

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI  N      +G+LT ++    + +++G L + +  D D VIEAV E + +
Sbjct: 328 ENLERGLATIRRNYENTAKKGRLTLEQVEERMALIRGTLSFEDLADADYVIEAVFEDMNV 387

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F  L+  C P  ILA+NTST+D+N +   TS  ++++G HFFSPA+VM LLEIVR 
Sbjct: 388 KREVFGRLDAVCKPGAILASNTSTLDVNEIARATSRPEQVLGMHFFSPANVMKLLEIVRP 447

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++   Q ++  + + K + KV VVVG C GF  NR    Y + A+ +V  G    ++D A
Sbjct: 448 DKVDDQTLVTSVQLAKTLGKVGVVVGVCDGFVGNRMINQYGREAQQMVEEGASPRQVDDA 507

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAAT-SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           + + GLP+GPF++ D+AG  +  A   ++  +A  ++S     +D ++++GR G+  G G
Sbjct: 508 MHALGLPMGPFEMSDMAGLDIGYAIRQRQAQEAGREKS--DTFMDRIVEAGRKGQKTGAG 565

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           +Y+Y  G  P+ DP    II++ R    +    +P  +T++EI + +++ +VNE  ++LE
Sbjct: 566 VYSYANGRTPEVDPVAEQIIQDSRAEKGV----EPRELTQEEITKRLVYQLVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI  RASD+D   V G  FP+ RGG + +A+ VG   V   +K++ + +G+ +KP+  L
Sbjct: 622 EGIAQRASDIDVIYVYGYGFPASRGGPMHYAETVGLENVLADIKEFHEQHGDTWKPAPLL 681

Query: 540 EERATKGIPLSAPVSSSSTS 559
           E    +G      +S+  ++
Sbjct: 682 ERLVREGKTFRDALSAQPSA 701


>gi|16127419|ref|NP_421983.1| fatty oxidation complex subunit alpha [Caulobacter crescentus CB15]
 gi|13424863|gb|AAK25151.1| fatty oxidation complex, alpha subunit [Caulobacter crescentus
           CB15]
          Length = 692

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 183/546 (33%), Positives = 287/546 (52%), Gaps = 14/546 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + ++    +GL D +V   +L + +  +A  + A  +P  +     +K+ +  
Sbjct: 155 MVTTGQHVPAKAAHAMGLFDELVEEGKLREGAIAFAKAVVAENRPLKKVRDLNEKVEAAR 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+ +  R    K        +  +  IE  +      G+  E K+F EL+    S  
Sbjct: 215 GKPEIFEAFRKANAKKFRGFMAPENNIKCIEAAVNLPFDEGLKAERKLFMELMTGSQSAA 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             +VFFA+R  +K+P+V D       V+KV VIG G MG GIA   +   I V + E   
Sbjct: 275 QRYVFFAERQAAKIPDVPD-DTPTIPVKKVGVIGAGTMGGGIAMNFLNAGIPVTIIEAKQ 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  I  N      +G+LTQD     + +L   ++     D DM+IEAV E + +
Sbjct: 334 ENLERGVGIIRKNYENTAKKGRLTQDDVEKRMALLTPSMEMEALADCDMIIEAVFELMEI 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F++L+K   P  ILATNTS +D++ +   TS  + +IG HFFSPA+VM LLE+VR 
Sbjct: 394 KKEVFTKLDKIAKPGAILATNTSYLDVDAIAAVTSRPESVIGTHFFSPANVMRLLELVRG 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS  VI   M + K I KVPV+VG C GF  NR      + A+ L+  G   + +D  
Sbjct: 454 DKTSKDVIATCMKLSKTIGKVPVLVGVCYGFVGNRMLAQRQREAQKLILEGAMPWDVDRV 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FGLP+GPF + DLAG  +       +D   P ++  S + ++L +  R G+ NGKG 
Sbjct: 514 LYDFGLPMGPFAMSDLAGLDIG------WD---PAKTSSSTVREVLCEMDRRGQKNGKGF 564

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++    KP P V  +I +      I    +   +T++EI+E  L+P+VNE  ++LEE
Sbjct: 565 YDYDENRNAKPSPVVEEVIRDFAEKRQI----QRREITDQEILERCLYPMVNEGAKILEE 620

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G  +RASD+D   + G  +P Y GG +FW + VG + V   +K++    G+ FKPS  LE
Sbjct: 621 GKAIRASDIDIVWINGYGWPVYSGGPMFWGELVGLDKVLAKMKQFHAELGDDFKPSALLE 680

Query: 541 ERATKG 546
               +G
Sbjct: 681 RLVAEG 686


>gi|299066775|emb|CBJ37969.1| fused 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
           [Ralstonia solanacearum CMR15]
          Length = 693

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 195/549 (35%), Positives = 290/549 (52%), Gaps = 15/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSL 59
           M++   ++ SE+  K GL D ++  + L+  +  +AL  AA  K P +R     D+    
Sbjct: 152 MIVSGTAVPSEQLAKSGLFDQMIEGD-LMAGAIGFALKAAAEGKLPKLR-----DRKVEH 205

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
                 L+ AR      A N P    C+D ++  +      G+  E  +F  LV    SR
Sbjct: 206 DNPEGFLQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIALVNTTESR 265

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L H FF +RA SK+P+V +     R V  VAVIG G MG GIA   +   I V + E  
Sbjct: 266 ALRHAFFGERAASKIPDVPE-DTPVRKVETVAVIGAGTMGGGIAMNFLNAGIPVTILETK 324

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +GI TI  N      +GKLT +K    + +LK  L Y + +D D+V+EAV E + 
Sbjct: 325 QEALDRGIATIRKNYENSAKKGKLTPEKVEARMALLKPTLSYDDIRDADLVVEAVFEDMG 384

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F  L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 385 VKETVFKTLDAVAKPGAILASNTSTLDVDRIAGFTRRPQDVVGMHFFSPANVMKLLEVVR 444

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D 
Sbjct: 445 GKATAKDVLATVMKLAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDR 504

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G
Sbjct: 505 AVEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRYGQKTGAG 563

Query: 420 LYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y+ G  KP P   V  +I +  +   I        ++++EIVE ++F +VNE  ++L
Sbjct: 564 WYDYKTGDRKPYPSQEVNDMILQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKIL 619

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSR 537
           EEGI  +ASD+D   + G  FP +RGG + +AD VG   V  +++++ + Y G  +KP+ 
Sbjct: 620 EEGIASKASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMRRYGKGYHGEAWKPAP 679

Query: 538 FLEERATKG 546
            L++ A  G
Sbjct: 680 LLQKLADAG 688


>gi|222111212|ref|YP_002553476.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
 gi|221730656|gb|ACM33476.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
           TPSY]
          Length = 699

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 187/513 (36%), Positives = 276/513 (53%), Gaps = 14/513 (2%)

Query: 18  LIDAVVTSEELLKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E L    L +A  +A  R  P +R+L          E     + AR   K 
Sbjct: 172 LFDKMTASPESLAEEALAFARSVADVRPLPLVRNLPCKH-----PEGDAYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E ++F  L+    SR L H+FFA+RA SK+P
Sbjct: 227 MAKNFPAPAKCVDAVEAATKRKFADGLAYERELFINLMWTPESRALRHLFFAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V     K R ++KV VIG G MG GI+   +   I V + E+  E L +GI TI+ N  
Sbjct: 287 DVPSETPK-RDIKKVGVIGAGTMGGGISMNFLNAGIPVTILEMKQEALDRGIGTIQKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL +DK    + +L   L+Y++ KD D++IEAV E + +K+ +F +L+    P 
Sbjct: 346 AQVKKGKLKEDKYQQRMALLSTTLNYADLKDCDLIIEAVFEELGVKEAVFKQLDAVAKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+  V+  +M + 
Sbjct: 406 AILASNTSTLDVDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMALA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    YSQ A  L+  G    ++D AI  FG  +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ G +   P   
Sbjct: 526 LAGNDIGWAIRKRRAVEQPDMKY-SKTADLLCEMGRFGQKTGAGWYDYQAGKRDAIPSDV 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V  +IE  R+   I P      V+++EIV+ +++ +VNE  ++LEEGI  ++ D+D   +
Sbjct: 585 VNQMIEAHRKALGITPR----KVSDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            G  FP +RGG + +A  VG   V  S+K++++
Sbjct: 641 TGYGFPIHRGGPMHYASEVGLFNVVQSMKRFAR 673


>gi|167738151|ref|ZP_02410925.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           14]
          Length = 543

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/528 (35%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 1   MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 56

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 57  NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 116

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 117 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 174

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 175 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 234

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 235 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 294

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 295 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 354

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 355 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 413

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 414 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 470

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 471 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 518


>gi|167823745|ref|ZP_02455216.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           9]
          Length = 561

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/528 (35%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 19  MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 74

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 75  NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 134

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 135 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 192

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 193 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 252

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 253 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 312

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 313 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 372

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 373 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 431

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 432 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 488

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 489 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 536


>gi|134277281|ref|ZP_01763996.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           305]
 gi|134250931|gb|EBA51010.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           305]
          Length = 694

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/528 (35%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTGRPQDVVGLHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|167719148|ref|ZP_02402384.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           DM98]
          Length = 694

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/528 (35%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|56695674|ref|YP_166025.1| enoyl-CoA hydratase [Ruegeria pomeroyi DSS-3]
 gi|56677411|gb|AAV94077.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Ruegeria pomeroyi DSS-3]
          Length = 698

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/551 (34%), Positives = 288/551 (52%), Gaps = 19/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVSRLWAL-DIAARRKPWIRSLHRTDKLGS 58
           M+   + + ++E  +LG+ID V   E   + +S L  L D  A R+P +  +     +  
Sbjct: 151 MITTGRHVRADEALRLGVIDRVAEGEPREIGLSYLRELLDEGAPRRP-VGEMPAPAPVDF 209

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            +    VL+  R Q            AC             +G+ +E ++F EL+  D  
Sbjct: 210 DAIYAAVLRKGRGQLSPATAVRAVQAACE-------AESFAAGLKRERELFMELMNSDQR 262

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            GL+H FFA RA  K+P +   G+ PR +  + VIGGG MG+GIATA +L+ + V + E+
Sbjct: 263 EGLIHAFFADRAVGKLPELE--GVAPRPLAAIGVIGGGTMGAGIATAALLSGLSVTMLEM 320

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANN-ALKMLKGVLDYSEFKDVDMVIEAVIES 237
             E        IE N+ G + RGKLT  + +N   K L   +DY    D D+VIEAV E 
Sbjct: 321 TPEAAEAAKGRIEGNLSGALKRGKLTAQQFDNLTTKALTLAIDYDALADADLVIEAVFED 380

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+++F++L+  C P  +LA+NTS +D+N +   TS    ++G HFFSPAHVM LLE+
Sbjct: 381 MEVKKQVFTKLDAVCKPGAVLASNTSYLDINQIAAVTSRPQDVLGLHFFSPAHVMKLLEV 440

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           V  ++T+  V      +GK + KV V  G C GF  NR    Y   A  ++  G   ++I
Sbjct: 441 VIADQTAPDVAATGFALGKRLGKVSVRAGVCDGFIGNRILSVYRTCADHMILDGASPYQI 500

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSK-EFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           D A+  FG  +GPF + DLAG  +  A  K +  +    R+  S   D L ++G  G+  
Sbjct: 501 DEALEEFGFAMGPFAVADLAGLDIGWAVRKRKRAEGLDPRARDSAYADKLCEAGHFGQKT 560

Query: 417 GKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           GKG Y Y  G+K + P+P VLP+IE  R    I     P + ++ EIV   +  +VNE+ 
Sbjct: 561 GKGYYDYAAGAKARVPNPEVLPLIEAERAQQGIT----PRAFSKDEIVRRYMAAMVNEAA 616

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           +V+ EGI  R  D+D   + G  FP YRGG + WAD  G   +   +K+W+     F++P
Sbjct: 617 KVVGEGIARRPLDVDVTLLYGYGFPRYRGGPLKWADMQGLPELLADIKRWAAEDAYFWQP 676

Query: 536 SRFLEERATKG 546
           +  LE+   +G
Sbjct: 677 APLLEQLVAEG 687


>gi|53719060|ref|YP_108046.1| fatty acid degradation protein [Burkholderia pseudomallei K96243]
 gi|167815336|ref|ZP_02447016.1| putative fatty acid degradation protein (possibly trifunctional)
           [Burkholderia pseudomallei 91]
 gi|167902285|ref|ZP_02489490.1| putative fatty acid degradation protein (possibly trifunctional)
           [Burkholderia pseudomallei NCTC 13177]
 gi|237812653|ref|YP_002897104.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
 gi|254179451|ref|ZP_04886050.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|418382845|ref|ZP_12966770.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           354a]
 gi|418553051|ref|ZP_13117892.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           354e]
 gi|52209474|emb|CAH35426.1| putative fatty acid degradation protein (possibly trifunctional)
           [Burkholderia pseudomallei K96243]
 gi|184209991|gb|EDU07034.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           1655]
 gi|237506159|gb|ACQ98477.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
 gi|385372167|gb|EIF77292.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           354e]
 gi|385376964|gb|EIF81593.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           354a]
          Length = 694

 Score =  305 bits (782), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/528 (35%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTGRPQDVVGLHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|167569618|ref|ZP_02362492.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           oklahomensis C6786]
          Length = 694

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 188/527 (35%), Positives = 281/527 (53%), Gaps = 9/527 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +V  + LL  +  +A  + A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDELVEGD-LLDAAVAFARKVGAASGPHPRV---RDREIVHQ 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKALAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFIALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V   G   R +  VAVIG G MG GIA   +   + V L E   
Sbjct: 268 LRHAFFGERAASKIPDVP-AGTPARAIESVAVIGAGTMGGGIAMNFLNAGLPVTLLETKQ 326

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           + L +G+ TI  N    V +GKLTQ+K +  + ++K  L Y + KD D+VIEAV E + +
Sbjct: 327 DALDRGLATIRKNYDAQVKKGKLTQEKLDARMALVKPTLAYDDLKDADLVIEAVFEELGV 386

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 387 KEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRG 446

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D A
Sbjct: 447 DATAKDVLATVMQIAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDRA 506

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G 
Sbjct: 507 IEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAGW 565

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y  G + K  PS L  ++E     +   G +   + + EIVE +++ +VNE  ++LEE
Sbjct: 566 YDYVPGDR-KAQPSKL--VDEMVAAYSKERGVERRRIGDAEIVERLVYALVNEGAKILEE 622

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ +++
Sbjct: 623 KIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAE 669


>gi|53723637|ref|YP_103090.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
           23344]
 gi|76810376|ref|YP_333850.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
           1710b]
 gi|121599487|ref|YP_993247.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           domain-containing protein [Burkholderia mallei SAVP1]
 gi|124384112|ref|YP_001029308.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
           10229]
 gi|126440121|ref|YP_001059329.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
 gi|126449433|ref|YP_001080755.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
 gi|166998730|ref|ZP_02264584.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei
           PRL-20]
 gi|167910526|ref|ZP_02497617.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           112]
 gi|167918554|ref|ZP_02505645.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           BCC215]
 gi|226197152|ref|ZP_03792729.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|238562188|ref|ZP_00440761.2| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
 gi|254177997|ref|ZP_04884652.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|254189161|ref|ZP_04895672.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254200037|ref|ZP_04906403.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|254206372|ref|ZP_04912724.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|254259421|ref|ZP_04950475.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|254358214|ref|ZP_04974487.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|418540588|ref|ZP_13106116.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           1258a]
 gi|418546832|ref|ZP_13112021.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           1258b]
 gi|52427060|gb|AAU47653.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           mallei ATCC 23344]
 gi|76579829|gb|ABA49304.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           pseudomallei 1710b]
 gi|121228297|gb|ABM50815.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei SAVP1]
 gi|124292132|gb|ABN01401.1| putative fatty oxidation complex, alpha subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219614|gb|ABN83120.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           668]
 gi|126242303|gb|ABO05396.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei NCTC
           10247]
 gi|147749633|gb|EDK56707.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei FMH]
 gi|147753815|gb|EDK60880.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei JHU]
 gi|148027341|gb|EDK85362.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei
           2002721280]
 gi|157936840|gb|EDO92510.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160699036|gb|EDP89006.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei ATCC
           10399]
 gi|225930531|gb|EEH26541.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|238523039|gb|EEP86480.1| peroxisomal bifunctional enzyme [Burkholderia mallei GB8 horse 4]
 gi|243065085|gb|EES47271.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia mallei
           PRL-20]
 gi|254218110|gb|EET07494.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           1710a]
 gi|385361078|gb|EIF66976.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           1258a]
 gi|385362861|gb|EIF68655.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           1258b]
          Length = 694

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 190/528 (35%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|387902459|ref|YP_006332798.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
 gi|387577351|gb|AFJ86067.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
          Length = 694

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 186/527 (35%), Positives = 280/527 (53%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL DA+   + LL  +  +A    A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLATSGLFDAMADGD-LLDAAVAFARQAGAQSGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G++HG   G + E   F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLHGFDKGSVAERDGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+V V+G G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVGVVGAGTMGGGIAMNFVNAGLPVTLLETT 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ K +  + ++   L Y +  D D+V+EAV E + 
Sbjct: 326 QDALDRGLATIRKNYDAQVRKGKLTQQKLDARMALITPTLSYDDLHDADLVVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGRLDAVAKPGAILASNTSTLDIDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GANTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCELGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G +    PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVAGER-TAKPSAL--VDEMVVAYSNERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYA 668


>gi|339325689|ref|YP_004685382.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
 gi|338165846|gb|AEI76901.1| enoyl-CoA hydratase FadB [Cupriavidus necator N-1]
          Length = 693

 Score =  305 bits (780), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 267/483 (55%), Gaps = 9/483 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L  AR      A N P    CL+ +  G +     G+ +E + F  LV    SR L H F
Sbjct: 213 LGFARNTVAAMAKNFPAPLKCLEAVA-GSLKPFEQGLKEEREGFLFLVTTPESRALRHAF 271

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           F +RA SK+P+V + G   R + KVAVIG G MG GI+   +   I V + E   E L +
Sbjct: 272 FGERAASKIPDVPE-GTPTRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDR 330

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G+ TI  N      +GKLTQ+K    + +L   L Y + KD D++IEAV E + +K+ +F
Sbjct: 331 GVATIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVF 390

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
            +L++      ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR E+T  
Sbjct: 391 KKLDEVAKQGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGK 450

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+  +M +GK IKK  VV G C GF  NR    YS+ A  L+  G    ++D AI  FG
Sbjct: 451 DVLATVMQIGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFG 510

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
             +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ 
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADLLCEMGRFGQKTGAGWYDYKA 569

Query: 426 GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
           G  KP P+  V  +I +  +   I        ++++EIVE ++F +VNE  ++LEEGI  
Sbjct: 570 GDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILEEGIAS 625

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERA 543
           +ASD+D   + G  FP +RGG + +AD VG   V  S+K++++ Y G  ++ +  L++ A
Sbjct: 626 KASDIDMVYLTGYGFPLFRGGPMLYADQVGLYNVALSMKRYAKGYHGEAWQVAPLLQKLA 685

Query: 544 TKG 546
            +G
Sbjct: 686 DEG 688


>gi|386861445|ref|YP_006274394.1| fatty oxidation complex subunit alpha [Burkholderia pseudomallei
           1026b]
 gi|418533716|ref|ZP_13099575.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           1026a]
 gi|385360676|gb|EIF66590.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           1026a]
 gi|385658573|gb|AFI65996.1| fatty oxidation complex, alpha subunit [Burkholderia pseudomallei
           1026b]
          Length = 694

 Score =  305 bits (780), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 189/528 (35%), Positives = 281/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K ++K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GEHTAKDVLATVMQLAKKVRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|86748869|ref|YP_485365.1| enoyl-CoA hydratase [Rhodopseudomonas palustris HaA2]
 gi|86571897|gb|ABD06454.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Rhodopseudomonas palustris HaA2]
          Length = 699

 Score =  304 bits (779), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 187/548 (34%), Positives = 291/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI  +V  E        +A  + A + P  R      KL +  
Sbjct: 152 MIVGGNPIGAAEALKHGLISEIV--EGPASGGEAFARKVLAEKLPARRLRDDDSKLAAAR 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K A  +    AC D I   I      G+ KE + F +LV+ D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKARGLEAPFACADAIGAAIDLPFEEGLKKEREGFMKLVVSDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +KV  V D G KPR V +VA+IG G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GTKPRPVSRVAIIGAGTMGGGIAMSFANAGIPVTLIETGK 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ G++     KD D++IEAV E++ +
Sbjct: 329 EQLDRGMGIMQKNYEATAARGGIPADAPAKRMGLITGMVGLDNVKDADLIIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ L+    P  +LA+NTS ++++ +   T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFTALDAYAKPGAVLASNTSYLNVDDIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+   +L  +++ K I KVPVVVG C GF  NR     S+ +  L+  G    ++D+ 
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKLLFEGAPPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  +I +   L+ +  G K   V+++EI+E +++P++NE  R+LE
Sbjct: 562 YKYEAGSRSPLPDPEVETLINDT--LTKL--GLKRREVSDEEILERMMYPMINEGARILE 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           E I  R SD+D   + G  +P YRGG + +AD VG  ++   L  +++   +   +PS  
Sbjct: 618 ENIAARPSDIDVVWLYGYGWPIYRGGPMHYADGVGLKHIAERLSYYAKATNDPSLEPSPL 677

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 678 LKKLAAEG 685


>gi|94314029|ref|YP_587238.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Cupriavidus metallidurans CH34]
 gi|93357881|gb|ABF11969.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Cupriavidus metallidurans CH34]
          Length = 715

 Score =  304 bits (779), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 187/551 (33%), Positives = 284/551 (51%), Gaps = 11/551 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEE--LLKVSRLWALDIAARRKPWIRSL-HRTDKLG 57
           M+    S++ E   ++GL DAV  +          + AL I   R    R++ H      
Sbjct: 163 MVQQGASVSGEAAARIGLADAVADARPSGTRDAGPVVALAIDFCRSAAARAVAHPVASAL 222

Query: 58  SLSEAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
           ++  + +V   AR+ A    A N     AC+  +E         G+  E   F+ LV  +
Sbjct: 223 AVKASGDVDFGARIAAINGKARNALAQNACIRCVEAATQLPIADGLAFERAQFEALVAGN 282

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
            S+ L H+FFA+R   K      + L+P  + +VAVIG G MG GIA + +   I V+L 
Sbjct: 283 ESKALRHIFFAEREAPKFAEGKGLALRP--IERVAVIGSGTMGVGIAMSFVNAGIPVMLI 340

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E     L +G+  I  N      +GKL   + +  +  +   L +    D D+V+EAV E
Sbjct: 341 EREQAALDRGMALIRRNYEITAAKGKLAPQQIDACMGRITPTLAFEAVADADLVVEAVFE 400

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +KQ IF  L+  C P  ILATNTS ++++ +   T     +IG HFFSPA+VM LLE
Sbjct: 401 DMAVKQAIFERLDALCKPSAILATNTSRLNIDTIAASTKRPGDVIGLHFFSPANVMKLLE 460

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +VR + T A VI   M + + I+K+PV+V  C GF  NR   PY + A  L+  G    +
Sbjct: 461 VVRGQATRADVIASCMAMAQRIRKIPVLVRVCEGFVGNRMLTPYWREAGFLLEEGASPLQ 520

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +D A+  FG+ +GP  + DLAG  +  AT K      P     S + D + + GR G+  
Sbjct: 521 VDRALTQFGMAMGPLTMADLAGMDINWATRKRLAPTRPAHLRYSAVADRICELGRFGQKT 580

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
             G Y YE GS+ P PDP +  +IEEC R + I    +P  V ++EIVE  +  ++NE  
Sbjct: 581 NGGYYRYEPGSRTPIPDPQIDALIEECAREAGITR--RP--VADEEIVERCMLALINEGA 636

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R+L+EGI  RASD+D   V G  FP++RGG +F+A+ +G  +V   ++    ++G  ++P
Sbjct: 637 RILDEGIAQRASDIDVVYVHGYGFPAWRGGPMFYAETLGLAHVLARIRALQDVHGAHWEP 696

Query: 536 SRFLEERATKG 546
           +  LE    +G
Sbjct: 697 APLLERLVAEG 707


>gi|429211033|ref|ZP_19202199.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
 gi|428158447|gb|EKX04994.1| enoyl-CoA hydratase [Pseudomonas sp. M1]
          Length = 693

 Score =  304 bits (779), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 171/479 (35%), Positives = 269/479 (56%), Gaps = 12/479 (2%)

Query: 72  QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131
           + +K  P +     C+  +E         G+ +E ++F+E +       L+H FFA+R  
Sbjct: 217 EVQKRMPGLFSPLRCVAAVEAASRLPLAEGLKRERELFQECLESPQRAALIHAFFAEREA 276

Query: 132 SKV---PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 188
           +K+   P  T +    R VR  AVIGGG MG GIA       I V L EV+   L + ++
Sbjct: 277 AKIAGLPADTQV----REVRTAAVIGGGTMGVGIALCFANVGIPVKLLEVDGAALDRALQ 332

Query: 189 TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSEL 248
              A  +  V RG LT D     L +++GVL+Y+   DVD+ IEAV ES+ +K+++F  L
Sbjct: 333 RARATYQASVERGSLTSDAMEKRLGLIQGVLNYAALADVDLAIEAVFESLEVKRQVFERL 392

Query: 249 EKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVI 308
           +  C P  ILA+NTS++DL+ +   T     ++G HFFSPA+VM LLE+VR   TSA+V+
Sbjct: 393 DAVCKPGAILASNTSSLDLDAIAAFTRRPQDVVGLHFFSPANVMRLLEVVRGRETSAEVL 452

Query: 309 LDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPI 368
              M +GK +KKV V VG C GF  NR  F Y + A  L+  G    ++D+A+R FG+ +
Sbjct: 453 ASAMQLGKRLKKVAVAVGVCDGFVGNRMIFQYGRQAEFLLEEGASPAQVDAALRDFGMAM 512

Query: 369 GPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK 428
           GP  + DL+G  ++ A  +              ++D L  +G  G+  G G Y Y +GS+
Sbjct: 513 GPLAVRDLSGLDISHAIRERQRPGLEPGQTLPTVLDHLYAAGMLGQKTGAGFYLYPQGSR 572

Query: 429 -PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 487
            P+ +P++  ++E+      I+   +P+S   + IVE  LF +VNE+ R+L+EGI  RAS
Sbjct: 573 TPQDNPALPAMLEQAAATRGIVR--QPVSA--EHIVERCLFALVNEAARILDEGIAQRAS 628

Query: 488 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           D+D   + G  FP++RGG +F AD +G ++V   ++++ Q +G +++P+  LE    +G
Sbjct: 629 DVDLIFLNGYGFPAWRGGPLFHADRLGLDHVLQRIREFHQRFGAWWEPAPLLERLVAEG 687


>gi|170692430|ref|ZP_02883593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
           C4D1M]
 gi|170142860|gb|EDT11025.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
           C4D1M]
          Length = 694

 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 188/550 (34%), Positives = 296/550 (53%), Gaps = 16/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + S++    GL D +   + L + +  +A  + A++ P  +     D+     
Sbjct: 152 MIVSGAPVDSQKLAGSGLFDELAEGD-LTQAALAFARKVGAKQGPHPKV---RDRKIEHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A N P    C+D +E G+ +G   G+  E + F  LV    SR 
Sbjct: 208 NAEGFIQFARNSVAAIAKNFPAPLKCIDAVEAGVKNGFDKGLAFERECFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FFA+RA SK+P+V  D  +  R +R+VAVIG G MG GIA   I   I V L E+ 
Sbjct: 268 LRHAFFAERAASKIPDVPADTPV--REIRQVAVIGAGTMGGGIAMNFINAGIPVTLLEMK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKL  +     + ++   L Y + K+ D+++EAV E + 
Sbjct: 326 QDALERGLATIRNNYEASVKKGKLKPEALQERMALITTTLSYDDLKNADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEIAKPGAILASNTSTLDVDKIAAFTKRPQDVVGTHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+T+  V+  +M + K IKK  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GEKTAKDVLATVMKLAKKIKKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L +SGR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDMHY-SKIADRLCESGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLP--IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
            Y Y+ G     D +  P  +++E     +   G +   + + EIVE ++F +VNE  ++
Sbjct: 565 WYDYKAG-----DRTAYPSKMVDEMIVAYSKETGSERRKIGDDEIVERLVFALVNEGAKI 619

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPS 536
           LEEGI  +ASD+D   + G  FP YRGG + +AD VG   V  +++++ SQ  G+ ++ +
Sbjct: 620 LEEGIASKASDIDMVYLTGYGFPLYRGGPMLYADTVGLYNVERAIRRYASQPNGDAWQLA 679

Query: 537 RFLEERATKG 546
             + E A +G
Sbjct: 680 PSIAELAAQG 689


>gi|395005317|ref|ZP_10389201.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
 gi|394316700|gb|EJE53410.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
          Length = 699

 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 179/490 (36%), Positives = 268/490 (54%), Gaps = 10/490 (2%)

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E     + AR   K  A N P    C+D +E         G+L E ++F  L+    SR 
Sbjct: 212 EGDAYFQFARNMVKGMAKNYPAPAKCVDAVEAATKRKFADGMLFEREIFINLMWTPESRA 271

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+F A+RA SK+P+V     K R ++ VAVIG G MG GI+   +   I V + E   
Sbjct: 272 LRHLFMAERAASKIPDVPSDTPK-REIKSVAVIGAGTMGGGISMNFLNAGIPVKILEAKQ 330

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI+ N    V +GKL +DK    + +L   LDY++ KD D+VIEAV E + +
Sbjct: 331 EALDRGVATIKKNYEAQVKKGKLKEDKYAQRMALLTTTLDYADLKDADLVIEAVFEELGV 390

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F +L+    P  ILA+NTST+D++ +   T   + ++G HFFSPA+VM LLE+VR 
Sbjct: 391 KEAVFKQLDAVMKPGAILASNTSTLDVDKIAAFTKRPEDVVGMHFFSPANVMKLLEVVRG 450

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +TS  V+  +M +GK IKK  VV G C GF  NR    YS+ A  L+  G    ++D A
Sbjct: 451 AKTSKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDRA 510

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG  +GPF++ DLAG  +  A  K       D  + S   D L + GR G+  G G 
Sbjct: 511 VEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKTGAGW 569

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+ G +   P   V  +IE+ R+   I P      ++++EIVE ++F +VNE   +LE
Sbjct: 570 YDYQAGKRDAIPSDLVNKMIEDHRKELGITPR----KISDEEIVERLVFALVNEGAHILE 625

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPS 536
           +GI  ++ D+D   + G  FP YRGG + +A  VG   V  ++ ++++   +   F+KP+
Sbjct: 626 DGIASKSGDIDMVYLTGYGFPIYRGGPMHYASEVGLFNVVQAMDRFAKNPNDDAQFWKPA 685

Query: 537 RFLEERATKG 546
             L + A +G
Sbjct: 686 PLLAKLAAEG 695


>gi|238026993|ref|YP_002911224.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
           BGR1]
 gi|237876187|gb|ACR28520.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Burkholderia glumae
           BGR1]
          Length = 694

 Score =  304 bits (778), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 183/527 (34%), Positives = 286/527 (54%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + +E+    GL D +   + LL  +  +   + A+  P  R     D+     
Sbjct: 152 MIVSGAPVPAEQLAASGLFDEIAAGD-LLDAAVAFGRRVGAQPGPHPRV---RDRAIVHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                ++ AR   K  AP  P    C+D IE G+++G   G+  E + F  LV    SR 
Sbjct: 208 NPAGFIQFARNSVKAAAPQYPAPHKCIDAIESGVLNGFEQGLADEREGFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FFA+RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   + VVL E  
Sbjct: 268 LRHAFFAERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFVNAGLPVVLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKLT +K    L ++   L Y +  + D++IEAV E + 
Sbjct: 326 QEALDRGLATIRKNYEAQVKKGKLTAEKLEARLALITPTLSYDDLGEADLIIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEVAKPGAILASNTSTLDVDRIAAFTQRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GEKTAKDVLATVMQIAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      P+  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPELHY-SKIADRLCELGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y+ G + +  PS L  ++E     +   G +  ++ + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYQPGER-RAKPSKL--VDEMVLAYSKEAGIERRAIGDDEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           EGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EGIASKASDVDMVYLTGYGFPLWRGGPMLYADEVGVYNVERAMRRYA 668


>gi|300704070|ref|YP_003745672.1| fused 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
           [Ralstonia solanacearum CFBP2957]
 gi|299071733|emb|CBJ43057.1| fused 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase, 3-hydroxyacyl-CoA dehydrogenase
           [Ralstonia solanacearum CFBP2957]
          Length = 693

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/483 (37%), Positives = 264/483 (54%), Gaps = 8/483 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIQFERDLFIELVNTTESRALRHAF 271

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           F +RA  K+P+V +     R V KVAVIG G MG GI+   +   I V + E   E L +
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           GI TI  N      +GKLTQ+K    + +LK  L Y + +D D+VIEAV E + +K+ +F
Sbjct: 331 GIATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 390

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
            +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+ 
Sbjct: 391 KKLDEVAKPGAILASNTSTLDVDRIAGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAK 450

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+  +M   K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A+ +FG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFG 510

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
             +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ 
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569

Query: 426 GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
           G  KP P   V  +I +  +   I        +++ EIVE +++ +VNE  ++LEEGI  
Sbjct: 570 GDRKPYPSQEVNEMIVQHSKDLGIA----RRKISDDEIVERLVYALVNEGAKILEEGIAS 625

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERA 543
           +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++ + Y G  +KP+  L++ A
Sbjct: 626 KASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYGKGYHGEAWKPAPLLQKLA 685

Query: 544 TKG 546
            +G
Sbjct: 686 DEG 688


>gi|326317169|ref|YP_004234841.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323374005|gb|ADX46274.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 699

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 187/513 (36%), Positives = 274/513 (53%), Gaps = 14/513 (2%)

Query: 18  LIDAVVTSEELLKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E L    L +A  +A  R  P +R+L      G         + AR   K 
Sbjct: 172 LFDKMAASAESLAEEALAFARSVADTRPLPLVRNLPARHPQGD-----AYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E ++F  L+    SR L H+F A+RA SK+P
Sbjct: 227 MAKNFPAPLKCVDAVEAATKRKFEDGLAYERELFVNLMWTPESRALRHLFLAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V     K R +RKV VIG G MG GI+   +   I V + E   E L +G+ TI  N  
Sbjct: 287 DVPSDTPK-REIRKVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGLATIRKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL QDK    + +L   L Y + KDVD+VIEAV E + +K+ +F +L++   P 
Sbjct: 346 AQVAKGKLKQDKYEQRMALLTPTLSYDDLKDVDLVIEAVFEEMGVKETVFKKLDEVARPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR ++T+  V+  +M + 
Sbjct: 406 AILASNTSTLDVDQIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    YSQ A  L+  G    ++D AI  FG  +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K      PD  + S   D L + GR G+  G G Y Y+ G +   P   
Sbjct: 526 LAGNDIGWAIRKRRAVERPDMKY-SRTADKLCELGRYGQKTGAGWYDYKPGKRDAIPSDL 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V  +IE+ R+   I     P  ++++EIV+ +++ +VNE  ++LEEGI  ++ D+D   +
Sbjct: 585 VNKMIEDHRKELGIT----PRKISDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            G  FP +RGG + +A  VG   V  S+++++Q
Sbjct: 641 TGYGFPIHRGGPMHYASEVGLFNVEQSMQRFAQ 673


>gi|134295941|ref|YP_001119676.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia vietnamiensis G4]
 gi|134139098|gb|ABO54841.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia vietnamiensis G4]
          Length = 694

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 184/527 (34%), Positives = 280/527 (53%), Gaps = 11/527 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL DA+   + LL  +  +A    A+  P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLATSGLFDAMADGD-LLDAAVAFARQAGAQSGPHPRV---RDRKIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  A+  APN P    C+D IE G++HG   G + E   F  L+M   SR 
Sbjct: 208 NAAGFIQFARNSARAAAPNFPAPHKCIDAIEAGVLHGFDKGSVAERDGFVALMMTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R++ V+G G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRIGVVGAGTMGGGIAMNFVNAGLPVTLLETT 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N    V +GKLTQ K +  + ++   L Y +  D D+V+EAV E + 
Sbjct: 326 QDALDRGLATIRKNYDAQVRKGKLTQQKLDARMALITPTLSYDDLHDADLVVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFGRLDAVAKPGAILASNTSTLDIDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GANTAKDVLATVMAVAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  +      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRRRRYVEQPDLHY-SKIADRLCELGRFGQKTGGG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G +    PS L  ++E     +   G +   + + EIVE ++F +VNE  ++LE
Sbjct: 565 WYDYVAGER-TAKPSAL--VDEMVVAYSNERGVERRKIGDDEIVERLVFALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAIRRYA 668


>gi|120611544|ref|YP_971222.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
 gi|120590008|gb|ABM33448.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
          Length = 699

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 187/513 (36%), Positives = 274/513 (53%), Gaps = 14/513 (2%)

Query: 18  LIDAVVTSEELLKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E L    L +A  +A  R  P +R+L      G         + AR   K 
Sbjct: 172 LFDRMAASAESLAEEALAFARSVADTRPLPLVRNLPAKHPQGD-----AYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E ++F  L+    SR L H+F A+RA SK+P
Sbjct: 227 MAKNFPAPLKCVDAVEAATKRKFEDGLAYERELFVNLMWTPESRALRHLFLAERAASKIP 286

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           +V     K R +RKV VIG G MG GI+   +   I V + E   E L +G+ TI  N  
Sbjct: 287 DVPSDTPK-REIRKVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGLATIRKNYE 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V + KL QDK    + +L   L+Y + KDVD+VIEAV E + +K+ +F +L++   P 
Sbjct: 346 AQVAKSKLKQDKYEQRMALLTPTLNYDDLKDVDLVIEAVFEEMGVKETVFRKLDEVAKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR ++T+  V+  +M + 
Sbjct: 406 AILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    YSQ A  L+  G    ++D AI  FG  +GPF++ D
Sbjct: 466 KKIKKTAVVSGVCDGFIGNRMIERYSQQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K      PD  + S   D L + GR G+  G G Y Y+ G +   P   
Sbjct: 526 LAGNDIGWAIRKRRAVERPDMKY-SRTADKLCELGRYGQKTGAGWYDYKPGKRDAIPSEL 584

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V  +IE+ R+   I     P  ++++EIV+ +++ +VNE  ++LEEGI  ++ D+D   +
Sbjct: 585 VNKMIEDHRKELGIT----PRKISDEEIVQRLVYALVNEGAKILEEGIASKSGDIDMVYL 640

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            G  FP +RGG + +A  VG   V  S+++++Q
Sbjct: 641 TGYGFPIHRGGPMHYASEVGLFNVAQSMQRFAQ 673


>gi|113867537|ref|YP_726026.1| enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
           [Ralstonia eutropha H16]
 gi|113526313|emb|CAJ92658.1| Enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
           [Ralstonia eutropha H16]
          Length = 693

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 266/483 (55%), Gaps = 9/483 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L  AR      A N P    CL+ +  G +     G+ +E + F  LV    SR L H F
Sbjct: 213 LGFARNTVAAMAKNFPAPLKCLEAVA-GSLKPFEQGLKQEREGFLYLVTTPESRALRHAF 271

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           F +RA SK+P+V + G   R + KVAVIG G MG GI+   +   I V + E   E L +
Sbjct: 272 FGERAASKIPDVPE-GTPTRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILETKQEALDR 330

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G+  I  N      +GKLTQ+K    + +L   L Y + KD D++IEAV E + +K+ +F
Sbjct: 331 GVGIIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDLKDADLIIEAVFEEMGVKETVF 390

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
            +L++      ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR E+T  
Sbjct: 391 KKLDEVAKQGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGEKTGK 450

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+  +M VGK IKK  VV G C GF  NR    YS+ A  L+  G    ++D AI  FG
Sbjct: 451 DVLATVMQVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAIEKFG 510

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
             +GPF++ DLAG  +  A  K      P+  + S   DLL + GR G+  G G Y Y+ 
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPEIQY-SKTADLLCEMGRFGQKTGAGWYDYKA 569

Query: 426 GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
           G  KP P+  V  +I +  +   I        ++++EIVE ++F +VNE  R+LEEGI  
Sbjct: 570 GDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGARILEEGIAS 625

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERA 543
           +ASD+D   + G  FP +RGG + +AD VG   V  S+K++++ Y G  ++ +  L++ A
Sbjct: 626 KASDIDMVYLTGYGFPLFRGGPMLYADQVGLYNVALSMKRYAKGYHGEAWQVAPLLQKLA 685

Query: 544 TKG 546
            +G
Sbjct: 686 DEG 688


>gi|194289576|ref|YP_002005483.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase (n-terminal); 3-hydroxyacyl-CoA
           dehydrogenase (c-terminal), partial [Cupriavidus
           taiwanensis LMG 19424]
 gi|193223411|emb|CAQ69416.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
           dehydrogenase (C-terminal) [Cupriavidus taiwanensis LMG
           19424]
          Length = 693

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 197/551 (35%), Positives = 294/551 (53%), Gaps = 19/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW--IRSLHRTDKLGS 58
           M++   ++ SE+     L D +V  + +L  +  +A ++ A   P   +R L    +   
Sbjct: 152 MIVSGTAVPSEKFAGTKLFDEIVDGD-VLPAAIKFAQNVGAASGPHPKVRDLKVRHE--- 207

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
              A   L  AR      A N P    CL+ +  G +     G+ +E + F  LV    S
Sbjct: 208 --NAEGYLGFARNTVAAMAKNFPAPLKCLEAVA-GSLKPFEQGLKQEREGFLFLVTTPES 264

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           R L H FF +RA SK+P+V + G   R + KVAVIG G MG GI+   +   I V + E 
Sbjct: 265 RALRHAFFGERAASKIPDVPE-GTPVRKIEKVAVIGAGTMGGGISMNFLNAGIPVTILET 323

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E L +G+  I  N      +GKLTQ+K    + +L   L Y + KD DMVIEAV E +
Sbjct: 324 KQEALDRGVGVIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDIKDADMVIEAVFEEM 383

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ +F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+V
Sbjct: 384 GVKEIVFKKLDEVMKPGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVV 443

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R ++T   V+  +M V K IKK  VV G C GF  NR    YS+ A  L+  G    ++D
Sbjct: 444 RGDKTGKDVLATVMQVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVD 503

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            AI  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G 
Sbjct: 504 KAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADLLCEMGRFGQKTGA 562

Query: 419 GLYTYEKGS-KPKPDPSVLP-IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           G Y Y+ G  KP P+  V   I++  + L     G     ++++EIVE ++F +VNE  +
Sbjct: 563 GWYDYKAGDRKPYPNQQVNDMIVQHSKDL-----GLTRRKISDEEIVERLVFALVNEGAK 617

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKP 535
           +LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++K++++ Y G  ++ 
Sbjct: 618 ILEEGIASKASDIDMVYLTGYGFPLFRGGPMLYADQVGLYNVALAMKRYAKGYHGEAWQV 677

Query: 536 SRFLEERATKG 546
           +  L++ A +G
Sbjct: 678 APLLQKLADEG 688


>gi|390571716|ref|ZP_10251953.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
 gi|389936330|gb|EIM98221.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
          Length = 694

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 191/550 (34%), Positives = 298/550 (54%), Gaps = 16/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW--IRSLHRTDKLGS 58
           M++    + SE+     + DA++  + L++ +  +A  + A+  P   IR     D+   
Sbjct: 152 MIVSGTPVMSEKLAGTPIFDALIEGD-LMEGALAFARKVGAQSGPHPKIR-----DRKIE 205

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
              A   ++ AR      A N P    C+D +E G++ G   G+  E + F  LV    S
Sbjct: 206 HPNAAGFIQFARNSVAAIAKNFPAPHKCIDAVEAGVLKGFEQGMKVERECFLALVQTPES 265

Query: 119 RGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L H FF +RA SK+P+V +D  +  R ++KVAVIG G MG GIA   I   + V++ E
Sbjct: 266 KALRHAFFGERAASKIPDVPSDTPV--RDIKKVAVIGAGTMGGGIAMNFINAGLPVMMLE 323

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              + L +GI TI  N    V +GKLT +     +  +   L Y + KD D++IEAV E 
Sbjct: 324 TKQDALDRGIATIRKNYEATVKKGKLTMEALEQRMASITPTLSYDDLKDADLIIEAVFEE 383

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+++F  L++   P  ILA+NTST+DLN +   T     ++G HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDLNKIAAFTKRPQDVVGMHFFSPANVMKLLEV 443

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR + T+  V+  +M V K IKK  VV G C GF  NR    Y + A  ++  G    ++
Sbjct: 444 VRGKDTAKDVLATVMKVAKKIKKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQV 503

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L ++GR G+  G
Sbjct: 504 DKAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKVADRLCETGRFGQKTG 562

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
            G Y Y+ G +    PS    I+E     +   G +   +++ EIVE ++F +VNE  ++
Sbjct: 563 GGWYDYKAGDR-NAYPS--KQIDEMIVAYSKELGVERRKLSDDEIVERLVFALVNEGAKI 619

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPS 536
           LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  +++++ +Q  G+ ++ +
Sbjct: 620 LEEGIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVEHAIRRYAAQPNGDAWQIA 679

Query: 537 RFLEERATKG 546
             + ERA +G
Sbjct: 680 AGIVERAAQG 689


>gi|333892777|ref|YP_004466652.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
 gi|332992795|gb|AEF02850.1| 3-hydroxyacyl-CoA dehydrogenase [Alteromonas sp. SN2]
          Length = 706

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 260/494 (52%), Gaps = 15/494 (3%)

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E + V      Q KK A        C++ ++         G+  E K+F E +    +R 
Sbjct: 212 EVQGVFDAVTAQTKKAARGFFAPLKCIEAVKGAYTLAFEDGLKHEGKLFMECMNTPQARA 271

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             H FFA+RA   V +  D     R + KVAVIG G MG GIA       I V + E+  
Sbjct: 272 QQHFFFAERAAGHVSDF-DKSTPERSIEKVAVIGAGTMGGGIAMNFANAGIPVTMLELKQ 330

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L KG+  I  N      +GKLTQ++    + +L G   Y +  DVD+VIEAV E + +
Sbjct: 331 EALDKGLALIRKNYENSAKKGKLTQEQVETRMALLSGTTTYDDLADVDLVIEAVFEKMEV 390

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+ L+K C P  ILA+NTST+D+N +   TS    +IG HFFSPA+VM LLE+V+ 
Sbjct: 391 KKTVFTTLDKVCKPGAILASNTSTLDVNEIAACTSRPQDVIGLHFFSPANVMKLLEVVKA 450

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E TSA VI   M + K IKKV V+VG C GF  NR   PY + A  L+  G    ++D  
Sbjct: 451 EDTSADVIKTCMKLAKRIKKVAVLVGVCFGFVGNRMIEPYGREANRLLLEGASPEQVDRV 510

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + D+AG  +     +              + D L++  RNG   G+G 
Sbjct: 511 LTQFGMPMGPFTMGDMAGLDIGYYVRQSRQAFISHDPTYGAVADRLVEKDRNGLKTGRGA 570

Query: 421 YTYEKGSK-PKPDPSVLPII-EECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE GS+ P PDP VL I  +E  RL       +   ++++EI+   L+ ++NE   +L
Sbjct: 571 YLYEAGSRVPIPDPEVLEIAKQEAARLGVT----QRDDISDEEILVRCLYTLINEGACIL 626

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF----FK 534
           EEGI  ++SD+D   V G  FP YRGG + +AD VG   +   L  +++  G++     +
Sbjct: 627 EEGIAAKSSDIDVIYVYGYGFPVYRGGPMQYADEVGLGEIVDKLSTYAERLGDYGKMWLQ 686

Query: 535 PSRFL----EERAT 544
           PS  L    +ER++
Sbjct: 687 PSDLLIKLAQERSS 700


>gi|388520677|gb|AFK48400.1| unknown [Lotus japonicus]
          Length = 181

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 141/180 (78%), Positives = 161/180 (89%)

Query: 384 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 443
           A  KEF  AFPDR+F++ L++LL+KSGRNGK NGKG Y YEKGSKPKPD S+LP IEE R
Sbjct: 2   AVGKEFTTAFPDRTFRTTLLELLIKSGRNGKNNGKGYYVYEKGSKPKPDASILPTIEESR 61

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
           RL NIMPGGKPISVT++EIVEMILFP+VNESCR+LEEG+V+RASDLD ASVLGMSFPSYR
Sbjct: 62  RLCNIMPGGKPISVTDQEIVEMILFPIVNESCRILEEGVVIRASDLDIASVLGMSFPSYR 121

Query: 504 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 563
           GGIVFWAD VGAN+VY+SLKKW++LYGNFFKPSR+LEERA KGIPLSAP S +  S+ARL
Sbjct: 122 GGIVFWADMVGANHVYSSLKKWTELYGNFFKPSRYLEERALKGIPLSAPASFNPRSKARL 181


>gi|420247746|ref|ZP_14751139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
 gi|398070461|gb|EJL61761.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
          Length = 694

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 191/556 (34%), Positives = 300/556 (53%), Gaps = 28/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR--KPWIRSLHRTDKLGS 58
           M++    + SE+     + DA++  + L++ +  +A  + A+    P IR     D+   
Sbjct: 152 MIVSGTPVMSEKLAGTPIFDALIEGD-LMEGALAFARKVGAQSGSHPKIR-----DRKIE 205

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
              A   ++ AR      A N P    C+D +E G++ G   G+  E + F  LV    S
Sbjct: 206 HPNAAGFIQFARNSVAAIAKNFPAPHKCIDAVEAGVLEGFEQGMKVERECFLALVQTPES 265

Query: 119 RGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L H FF +RA SK+P+V +D  +  R ++KVAVIG G MG GIA   I   + V++ E
Sbjct: 266 KALRHAFFGERAASKIPDVPSDTPV--RDIKKVAVIGAGTMGGGIAMNFINAGLPVMMLE 323

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              + L +GI TI  N    V +GKLT +     +  +   L Y + KD D++IEAV E 
Sbjct: 324 TKQDALDRGIATIRKNYEATVKKGKLTMEALEQRMASITPTLSYDDLKDADLIIEAVFEE 383

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+++F  L++   P  ILA+NTST+DLN +   T     ++G HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFKRLDEVAKPGAILASNTSTLDLNKIAAFTKRPQDVVGMHFFSPANVMKLLEV 443

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR + T+  V+  +M V K IKK  VV G C GF  NR    Y + A  ++  G    ++
Sbjct: 444 VRGKDTAKDVLATVMKVAKKIKKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQV 503

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L ++GR G+  G
Sbjct: 504 DKAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKIADRLCETGRFGQKTG 562

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG-GKPISV-----TEKEIVEMILFPVV 471
            G Y Y+ G     D +  P     +++  ++ G  K + V     ++ EIVE ++F +V
Sbjct: 563 GGWYDYKAG-----DRNAYP----SKQIDEMIVGYSKEVGVERRKLSDDEIVERLVFALV 613

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYG 530
           NE  ++LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  +++++ +Q  G
Sbjct: 614 NEGAKILEEGIASKASDIDMVYLTGYGFPLWRGGPMQYADTVGLYNVEHAIRRYAAQPNG 673

Query: 531 NFFKPSRFLEERATKG 546
           + ++ +  + ERA +G
Sbjct: 674 DAWQIAAGIVERAAQG 689


>gi|167581600|ref|ZP_02374474.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis TXDOH]
          Length = 694

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/528 (35%), Positives = 283/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL  +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLDAAVAFARKAGAASGPHPRV---RDREIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R ++ VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIKSVAVIGAGTMGGGIAMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKLTQ+K +  + +++  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALDRGLATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GGQTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIENFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G +   + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGLERREIGDDEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|294146813|ref|YP_003559479.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292677230|dbj|BAI98747.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 687

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 190/540 (35%), Positives = 282/540 (52%), Gaps = 18/540 (3%)

Query: 8   ITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 67
           +++    ++G++D V     L+  +  +   + A   P  R     D++ +  +  E+  
Sbjct: 159 VSASAAREMGIVDEVADEGALVGSALEYVRKLIAGGAPLRRVRDLEDRIAADRQQPELFD 218

Query: 68  LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 127
             R    +        ++ +  IE  +      G+ +E ++F EL     ++  +H FFA
Sbjct: 219 EFRRSNARAFRGKDAPESIVKAIEAAVALPFEEGLAREFELFVELEKGLQAKAQIHAFFA 278

Query: 128 QRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186
           +R  SKV +V  D  + P  VR V V+G G MG GIA   +   I V + E     L +G
Sbjct: 279 ERTASKVKDVPGDTPVLP--VRTVGVVGAGTMGGGIAMNFLNVGIPVHIVETAQANLDRG 336

Query: 187 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 246
           I TI  N    + RGKLT +     + +L   LD  + +D D++IEAV ES+PLKQ+IF+
Sbjct: 337 IATIRKNYEISLKRGKLTAEALERRMSLLHATLDLGDLRDCDLIIEAVFESMPLKQEIFA 396

Query: 247 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 306
           +L+       ILA+NTS +DLN +   TS  D +IG HFFSPA+VMPLLE+VR + T+  
Sbjct: 397 KLDAVARDGAILASNTSFLDLNQIARATSRPDHVIGLHFFSPANVMPLLEVVRGDATAKP 456

Query: 307 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 366
           V+   M + + I KVPV+ G C GF  NRA    ++ A LL+   +    ID+AI  +G 
Sbjct: 457 VVATAMKLARKIGKVPVLSGVCDGFIANRAMRARTEQADLLLLQNLSPDAIDAAIYDYGF 516

Query: 367 PIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKG 426
            +GPF++LDL G  V    S E       RS    LV     +GR G+ +G G Y Y++ 
Sbjct: 517 AMGPFRMLDLVGLDVIGRDSTE-------RSVAKDLV----AAGRMGQKSGGGYYDYDEA 565

Query: 427 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 486
              +P  + L II    R      G    S +++EIV  +L PVVNE  ++LEEGI +RA
Sbjct: 566 RAARPSEAALDII----RAHAAWKGIAQRSFSQEEIVARLLHPVVNEGAKILEEGIAMRA 621

Query: 487 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           SD+D A + G ++P   GG +FWADAVG   +  ++K      G   +PSR L E A  G
Sbjct: 622 SDIDVAMIKGYNWPVQTGGPMFWADAVGLPRIVETMKALEAEQGEAMRPSRLLVELAESG 681


>gi|83721623|ref|YP_442663.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
           E264]
 gi|167619716|ref|ZP_02388347.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis Bt4]
 gi|257138876|ref|ZP_05587138.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis E264]
 gi|83655448|gb|ABC39511.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis E264]
          Length = 694

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/528 (35%), Positives = 283/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL  +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLDAAVAFARKAGAASGPHPRV---RDREIVHD 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFGKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R ++ VAVIG G MG GIA   +   + V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIKSVAVIGAGTMGGGIAMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKLTQ+K +  + +++  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALDRGLATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GGQTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIETFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G +   + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGLERREIGDDEIVERLVYSLVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|337279644|ref|YP_004619116.1| 3-hydroxybutyryl-CoA epimerase [Ramlibacter tataouinensis TTB310]
 gi|334730721|gb|AEG93097.1| 3-hydroxybutyryl-CoA epimerase-like protein [Ramlibacter
           tataouinensis TTB310]
          Length = 700

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/526 (35%), Positives = 277/526 (52%), Gaps = 16/526 (3%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRL-WALDIAARRK-PWIRSLHRTDKLGSLSEA 62
           S+ +  + G KL   D + +S + L+   L +A  +A  R  P +R+L      G     
Sbjct: 161 SELLAQQPGQKL--FDKMASSAQALQEEALAFARSVADTRPLPLVRNLPCKHPQGD---- 214

Query: 63  REVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 122
               + AR   K  A N P    C+D +E         G+  E ++F  L+    SR L 
Sbjct: 215 -AYFQFARNMVKGMAKNFPAPVKCVDAVEFATRKKFDEGMTLEREIFTNLMFTPESRALR 273

Query: 123 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           H+F A+RA SK+P+V +     R ++ VAVIG G MG GI+   +   I V + E+  E 
Sbjct: 274 HIFMAERAASKIPDVPE-DTPQREIKAVAVIGAGTMGGGISMNFLNAGIPVTILEMKQEA 332

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L +GI TI  N    + +GKL QDK    + +LK  LDY +    D+VIEAV E + +KQ
Sbjct: 333 LDRGISTIRKNYEAQIKKGKLKQDKYEQRMSLLKTTLDYQDLAQADLVIEAVFEEMGVKQ 392

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
           K+F  L+       ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR  +
Sbjct: 393 KVFETLDGVMKKGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGGK 452

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           T+  V+  +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D AI 
Sbjct: 453 TAKDVLATVMQLAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAIE 512

Query: 363 SFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 422
            FG  +GPF++ DLAG  +  A  K       D  + S   D L + GR G+  G G Y 
Sbjct: 513 KFGFAMGPFRMGDLAGNDIGWAIRKRRATERADMKY-SRTADKLCELGRFGQKTGAGWYD 571

Query: 423 YEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
           Y+ G +   P   V  +I   R+   I    +P  ++++EIV+ +++ +VNE   +LEEG
Sbjct: 572 YQAGKRDAIPSKLVEDMIAAHRKELGI----EPRKISDEEIVQRLVYALVNEGAHILEEG 627

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           I  RASD+D   + G  FP +RGG + +AD VG   V  ++K++ Q
Sbjct: 628 IASRASDIDMVYLTGYGFPIHRGGPMLYADQVGLFNVMQAMKRFQQ 673


>gi|254473846|ref|ZP_05087240.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
 gi|211956956|gb|EEA92162.1| peroxisomal bifunctional enzyme [Pseudovibrio sp. JE062]
          Length = 717

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 167/463 (36%), Positives = 258/463 (55%), Gaps = 8/463 (1%)

Query: 86  CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 145
           C++ IE         G+ KE ++F EL      R L H FFA RA  K+P +   G+ PR
Sbjct: 239 CVEAIEMASQTSFADGMAKEREMFMELKNSAQHRALAHAFFADRALGKLPEIE--GIAPR 296

Query: 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 205
            ++ + VIGGG MG+GIAT  ++N + V L E + E L +   TI  NV G V +GKL+ 
Sbjct: 297 TLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDDEGLGRAKATIAKNVGGAVKKGKLSA 356

Query: 206 DKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264
           ++      + L    DY    DVD+V+EAV E + +K+++F +L++ C    +LATNTS 
Sbjct: 357 EQEQRIFDEALSLSTDYVSLSDVDLVVEAVFEDIDVKKQVFQKLDEVCKEGAVLATNTSY 416

Query: 265 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 324
           +D+N +   T     +IG HFFSPAH+M LLE+V  ++T+  VI     +GKI++KV V 
Sbjct: 417 LDVNAIAAVTKRPQDVIGLHFFSPAHIMKLLEVVVADKTAPDVIATGFQLGKIMRKVAVR 476

Query: 325 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 384
            G C GF  NR    Y  +A  +V  G   F +D  +  FG P+GP+ + DLAG  +  A
Sbjct: 477 AGVCDGFIGNRILATYRAAADAIVVDGSTPFEVDDVMLEFGFPMGPYAVSDLAGLDIGWA 536

Query: 385 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECR 443
           T K        R       D + + G  G+   KG Y YE G+ K  P+P+VL I+ E R
Sbjct: 537 TRKRKAPTRDPRERYFTFADRMCEQGWFGQKTSKGYYVYEDGARKGTPNPAVLDILTEER 596

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
           +   I       ++++++I++  +  +VNE+ +V+EEGI +R  D+D   + G  FP +R
Sbjct: 597 KEKQI----NAQNLSKEQILDRYMAAMVNEAAKVVEEGIALRPLDVDMTLIYGYGFPRWR 652

Query: 504 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           GG + +AD +G   + +++K ++Q    F++P++ LEE    G
Sbjct: 653 GGPMQYADEIGLEKILSNIKAYAQEDAYFWQPAKLLEELVASG 695


>gi|91978018|ref|YP_570677.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
           palustris BisB5]
 gi|91684474|gb|ABE40776.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Rhodopseudomonas palustris BisB5]
          Length = 699

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 185/548 (33%), Positives = 295/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + +  K GLI+ VV  E+ +     +A  + A ++P  R      KL +  
Sbjct: 152 MIVGGNPIGAADALKHGLIEEVV--EDRVAGGVAFARKVLAEKRPTRRLRDDDSKLAAAR 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K A  +    AC D I   I      G+ KE + F +LV+ D S+ 
Sbjct: 210 ADRSIFTNAVASMTKKARGLEAPFACADAIGAAIDLPFEQGLAKEREGFLKLVVSDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +KV  V D G KPR V +VA+IG G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKVDGVPD-GAKPRPVARVAIIGAGTMGGGIAMSFANAGIPVTLIETGK 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+     KD D++IEAV E++ +
Sbjct: 329 EQLDRGMGIMQKNYEATAARGGIPADAPAKRMGLITGVVGLENVKDADLIIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ L+    P  +LA+NTS ++++ +   T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFTALDAYAKPGAVLASNTSYLNVDEIAATTKRPQDVLGMHFFSPANVMKLCEIVRG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+   +L  +++ K I KVPVV G C GF  NR     S+ +  L+  G    ++D+ 
Sbjct: 449 AKTAPDALLTAVSIAKKIAKVPVVAGVCDGFIGNRMLAARSKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + +       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRQ-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE+GS+ P PDP V  +I +   L+ +  G K   V+++EI+E +++P++NE  R+LE
Sbjct: 562 YKYEQGSRSPLPDPEVETLINDT--LTKL--GLKRREVSDEEILERMVYPMINEGARILE 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           E I  R SD+D   + G  +P YRGG + +AD+VG  ++   L  +++   +   +P+  
Sbjct: 618 EKIAARPSDIDVVWLYGYGWPIYRGGPMHYADSVGLKHIAERLAFYAKATNDPSLEPAPL 677

Query: 539 LEERATKG 546
           L+  A +G
Sbjct: 678 LKRLAEEG 685


>gi|167562436|ref|ZP_02355352.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           oklahomensis EO147]
          Length = 694

 Score =  302 bits (773), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 187/527 (35%), Positives = 280/527 (53%), Gaps = 9/527 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL D +V  + LL  +  +A  + A   P  R  +R        
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDELVEGD-LLDAAVAFARKVGAASGPHPRVRNREI---VHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    S  
Sbjct: 208 NAAGFIQFARNSVKALAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFIALVQTPESHA 267

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V   G   R +  VAVIG G MG GIA   +   + V L E   
Sbjct: 268 LRHAFFGERAASKIPDVP-AGTPARVIESVAVIGAGTMGGGIAMNFLNAGLPVTLLETKQ 326

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           + L +G+ TI  N    V +GKLTQ+K +  + ++K  L Y + KD D+VIEAV E + +
Sbjct: 327 DALDRGLATIRKNYDAQVKKGKLTQEKLDARMALVKPTLAYDDLKDADLVIEAVFEELGV 386

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 387 KEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRG 446

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D A
Sbjct: 447 DATAKDVLATVMQIAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDRA 506

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G 
Sbjct: 507 IEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAGW 565

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y  G + K  PS L  ++E     +   G +   + + EIVE +++ +VNE  ++LEE
Sbjct: 566 YDYVPGDR-KAQPSKL--VDEMVAAYSKERGVERRRIGDAEIVERLVYALVNEGAKILEE 622

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ +++
Sbjct: 623 KIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAE 669


>gi|254503279|ref|ZP_05115430.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Labrenzia alexandrii DFL-11]
 gi|222439350|gb|EEE46029.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Labrenzia alexandrii DFL-11]
          Length = 696

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 183/550 (33%), Positives = 291/550 (52%), Gaps = 18/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA---LDIAARRKPWIRSLHRTDKLG 57
           M+   K +++ E  +LGLID +   +++      +A   +   A  +P       T + G
Sbjct: 153 MITSGKPVSANEALELGLIDQISGEDDMRAAGLAYAKALVKQGAGPRPVSGLPCNTPEDG 212

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
              +AR  L        K A      Q C+D IE  +      G+ +E  +F+ L+  D 
Sbjct: 213 LFDKARATLA-------KKARGQLASQKCIDAIEGAVNLPFAEGLAQERALFRALMDSDQ 265

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
              L+H FF++R   K+P + D+  +PR +  V +IGGG MGSGIAT+ +L  + V L E
Sbjct: 266 RAALIHAFFSERQVGKLPEIKDV--EPRILENVGIIGGGTMGSGIATSALLAGLTVTLIE 323

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDYSEFKDVDMVIEAVIE 236
            ++E + K   T+  N+ G V RGKL+Q+K +  +    K   DY    + D+VIEAV E
Sbjct: 324 RDAEAVAKAEGTVSKNLAGAVKRGKLSQEKFDAIMAGHFKAGSDYDALAEADLVIEAVFE 383

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
           S+ +K+++F +L+K C P  +LA+NTS +D++ + E TS    +IG HFFSPAHVM LLE
Sbjct: 384 SMDVKKEVFGKLDKICKPGAVLASNTSYLDVDEIAEITSRPADVIGLHFFSPAHVMRLLE 443

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           IV   +T+  V+     + K + K+ V  G C GF  NR    Y ++    V  G   F 
Sbjct: 444 IVVGAKTAPDVVATGFALAKRLGKIGVRAGVCDGFIGNRILATYRKAIDGAVLAGASPFD 503

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +D A+  FGL +GPF + DLAG  +   T +        R   +   D L + G +G+  
Sbjct: 504 VDRALVDFGLAMGPFAVSDLAGLDIGYMTRQRLAATRDPREVYAEFSDKLCEDGHHGRKT 563

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           G+G Y Y  G +P P+  +L  I E R    I    +  S++++EI++  +  +VNE+  
Sbjct: 564 GRGFYDY-SGEQPVPNDDILGYISEERAAKGI----ESRSLSDQEIIDRYMAAMVNEAAL 618

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           V+EEGI  R  D+D   + G  FP +RGG + +AD VG + +   +K++++     ++P+
Sbjct: 619 VVEEGIAQRPLDVDVTLLNGYGFPRWRGGPMQYADTVGVDKILNDIKRFAEEDDFLWQPA 678

Query: 537 RFLEERATKG 546
             LE+ A +G
Sbjct: 679 PLLEKLAAEG 688


>gi|83748601|ref|ZP_00945620.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
           UW551]
 gi|207743140|ref|YP_002259532.1| trifunctonal protein: enoyl-coa hydratase and
           delta3-cis-delta2-trans-enoyl-coa isomerase and
           3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
           IPO1609]
 gi|83724725|gb|EAP71884.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum
           UW551]
 gi|206594537|emb|CAQ61464.1| trifunctonal protein: enoyl-coa hydratase and
           delta3-cis-delta2-trans-enoyl-coa isomerase and
           3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
           IPO1609]
          Length = 693

 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 180/483 (37%), Positives = 264/483 (54%), Gaps = 8/483 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIQFERDLFIELVNTTESRALRHAF 271

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           F +RA  K+P+V +     R V KVAVIG G MG GI+   +   I V + E   E L +
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           GI TI  +      +GKLTQ+K    + +LK  L Y + +D D+VIEAV E + +K+ +F
Sbjct: 331 GIATIRKSYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 390

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
             L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+ 
Sbjct: 391 KTLDEVVKPGAILASNTSTLDVDRIAGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAK 450

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+  +M   K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A+  FG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFG 510

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
             +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ 
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569

Query: 426 GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
           G  KP P   V  +I +  +   I        ++++EIVE +++ +VNE  ++LEEGI  
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKDLGIA----RRKISDEEIVERLVYALVNEGAKILEEGIAS 625

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERA 543
           +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +KP+  L++ A
Sbjct: 626 KASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYSKGYHGEAWKPAPLLQKLA 685

Query: 544 TKG 546
            +G
Sbjct: 686 DEG 688


>gi|421888133|ref|ZP_16319245.1| fused 3-hydroxybutyryl-CoA
           epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
           dehydrogenase [Ralstonia solanacearum K60-1]
 gi|378966523|emb|CCF95993.1| fused 3-hydroxybutyryl-CoA
           epimerase,delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase, enoyl-CoA hydratase, 3-hydroxyacyl-CoA
           dehydrogenase [Ralstonia solanacearum K60-1]
          Length = 693

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 179/483 (37%), Positives = 263/483 (54%), Gaps = 8/483 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR L H F
Sbjct: 212 LQFARNTVAAVARNFPAPGKCVDAVQAAVEKRFDDGIKFERDLFIELVNTTESRALRHAF 271

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           F +RA  K+P+V +     R V +VAVIG G MG GI+   +   I V + E   E L +
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVERVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G+ TI  N      +GKLTQ+K    + +LK  L Y + +D D+VIEAV E + +K+ +F
Sbjct: 331 GVATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKEAVF 390

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
             L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T  
Sbjct: 391 KTLDEVAKPGAILASNTSTLDVDRIAGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATGK 450

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+  +M   K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A+ +FG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMETFG 510

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
             +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ 
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569

Query: 426 GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
           G  KP P   V  +I +  +   I        ++++EIVE +++ +VNE  ++LEEGI  
Sbjct: 570 GDRKPYPSQEVNDMIVQHSKDLGIA----RRKISDEEIVERLVYALVNEGAKILEEGIAS 625

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERA 543
           +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +KP+  L+  A
Sbjct: 626 KASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYSKGYHGEAWKPAPLLQRLA 685

Query: 544 TKG 546
            +G
Sbjct: 686 DEG 688


>gi|403519024|ref|YP_006653157.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           domain-containing protein [Burkholderia pseudomallei
           BPC006]
 gi|403074666|gb|AFR16246.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           domain-containing protein [Burkholderia pseudomallei
           BPC006]
          Length = 692

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 189/528 (35%), Positives = 280/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 150 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 205

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    S  
Sbjct: 206 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESCA 265

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 266 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 323

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 324 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 383

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 384 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 443

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 444 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 503

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 504 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 562

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 563 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 619

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 620 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 667


>gi|126453618|ref|YP_001066597.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           domain-containing protein [Burkholderia pseudomallei
           1106a]
 gi|167845292|ref|ZP_02470800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           B7210]
 gi|242316511|ref|ZP_04815527.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
 gi|254198130|ref|ZP_04904552.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|254297334|ref|ZP_04964787.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|126227260|gb|ABN90800.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           1106a]
 gi|157808034|gb|EDO85204.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           406e]
 gi|169654871|gb|EDS87564.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           S13]
 gi|242139750|gb|EES26152.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase domain protein [Burkholderia pseudomallei
           1106b]
          Length = 694

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 189/528 (35%), Positives = 280/528 (53%), Gaps = 11/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  K GL DA V  + LL+ +  +A    A   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAKSGLFDAFVEGD-LLEAAVAFARKAGAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR   K  A + P    C+D IE G++ G   G+  E   F  LV    S  
Sbjct: 208 NAAGFIQFARNSVKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESCA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA  K+ +V  D  +  RG+  VAVIG G MG GI    +   + V L E  
Sbjct: 268 LRHAFFGERAAGKIADVPADTAV--RGIESVAVIGAGTMGGGITMNFLNAGLPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V++GKLTQ+K +  + +L+  L Y + KD D+VIEAV E + 
Sbjct: 326 QEALERGLATIRKNYDAQVSKGKLTQEKLDARMALLRPTLSYDDLKDADLVIEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFKRLDEVAKPGAILASNTSTLDVNKIAAFTRRPQDVVGLHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID 
Sbjct: 446 GEHTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQIDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI +FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G
Sbjct: 506 AIEAFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAG 564

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y  G + +  PS L  ++E     +   G     + + EIVE +++ +VNE  ++LE
Sbjct: 565 WYDYVPGER-RAKPSKL--VDEMIVAYSSERGVARRQIGDAEIVERLVYALVNEGAKILE 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           E I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++Q
Sbjct: 622 EKIASKASDIDMVYLTGYGFPLWRGGPMLYADTVGLYNVERAMRGYAQ 669


>gi|99080201|ref|YP_612355.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Ruegeria sp. TM1040]
 gi|99036481|gb|ABF63093.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Ruegeria sp. TM1040]
          Length = 696

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 181/543 (33%), Positives = 292/543 (53%), Gaps = 14/543 (2%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALD-IAARRKPWIRSLHRTDKLGSLSEARE 64
           + I +EE    G+ID +  + ++ ++   +A + IA+  +P      RT  +     + +
Sbjct: 157 RQIGAEEALAAGVIDRISDTADIREMGLSYARELIASGAQP-----RRTSDIAPEPVSPD 211

Query: 65  VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 124
           V + AR +  K A      Q C+  +E  +      G+  E  +F+EL+  D    L+H 
Sbjct: 212 VFEQARAKLAKKARGQLAPQNCVKAVEGALSLPFAEGLANERALFQELMESDQRAALIHA 271

Query: 125 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FFA+R  +KVP +   G++PR + ++ VIGGG MG+GIA + +L  + V L E ++E + 
Sbjct: 272 FFAERQVAKVPEIN--GVEPRAISRIGVIGGGTMGAGIAVSALLAGLQVTLIERDAEAVS 329

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
           +    +   ++G V RGKLTQ+K +  ++   +   +Y+     D+VIEAV ES+ +K++
Sbjct: 330 RAETNVAKILQGSVKRGKLTQEKFDAIMREAFEASAEYATLATADVVIEAVFESMEVKKE 389

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F++L+  C P  +LA+NTS +D+N +   T+    +IG HFFSPAHVM LLEIV  + T
Sbjct: 390 VFTKLDAICKPGAVLASNTSYLDVNEIAAMTTRPQDVIGLHFFSPAHVMRLLEIVVADET 449

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           +  V      + K +KKV V  G C GF  NR    Y ++    V  G   F +D A+ +
Sbjct: 450 APDVTATGFALAKRLKKVAVRAGVCDGFIGNRILSHYRKAGDGAVLAGASPFEVDRALVN 509

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 423
           FGL +GP+ + DLAG  +  AT K        R   +  VD L ++G  G+  GKG Y Y
Sbjct: 510 FGLAMGPYAVSDLAGLDIGWATRKRLAPTRDPREVYAEFVDRLCEAGHLGRKTGKGFYVY 569

Query: 424 EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIV 483
           + G +  P+  VL  I E R    I     P    E+EIV+  +  ++NE+ RV+EEGI 
Sbjct: 570 DDGGQ-TPNAEVLDHIAEERAAKGIAAREIP----EQEIVDRYMAAMINEAARVVEEGIA 624

Query: 484 VRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 543
           +R  D+D   + G  FP +RGG + +AD VG   V   +++++Q     ++P+  L+   
Sbjct: 625 LRPLDVDVTLLNGYGFPRWRGGPMQYADTVGLEKVLADIERFAQEDDFLWQPAPLLKRLV 684

Query: 544 TKG 546
            +G
Sbjct: 685 AEG 687


>gi|351732218|ref|ZP_08949909.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax radicis
           N35]
          Length = 699

 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 176/490 (35%), Positives = 267/490 (54%), Gaps = 10/490 (2%)

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E     + AR   K  A N P    C+D +E         G+L E ++F  L+    SR 
Sbjct: 212 EGDAYFQFARNMVKGMAKNFPAPAKCVDAVEAATKKKFAEGMLVEREIFINLMWTPESRA 271

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+F A+RA SK+P+V     K R ++ V VIG G MG GI+   +   I V + E+  
Sbjct: 272 LRHLFMAERAASKIPDVASDTPK-RDIKLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQ 330

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +GI TI+ N    V +GKL QDK +  + +L   L Y +FKD D++IEAV E + +
Sbjct: 331 EALDRGIATIKKNYEAQVKKGKLKQDKYDQRMALLSTTLSYDDFKDCDLIIEAVFEEMGV 390

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F +L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 391 KEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRG 450

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M +GK IKK  VV G C GF  NR    YS+ A  L+  G    ++D A
Sbjct: 451 KETAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKA 510

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG  +GPF++ DLAG  +  A  K       D  + S   D L + GR G+  G G 
Sbjct: 511 VEKFGFAMGPFRMGDLAGNDIGWAIRKRRSVERADMKY-SRTADKLCELGRFGQKTGAGW 569

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+ G +   P   V  +IE+ R+   I P      ++++EIV+ ++F +VNE   +LE
Sbjct: 570 YDYQAGKRDAIPSDLVNKMIEDHRKELGITPR----KISDEEIVQRLVFALVNEGAHILE 625

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPS 536
           +GI  ++ D+D   + G  FP +RGG + +A  VG   V  ++ ++++   +   F+KP+
Sbjct: 626 DGIASKSGDIDMVYLTGYGFPIHRGGPMHYASEVGLFNVVQAMDRFAKNPNDDATFWKPA 685

Query: 537 RFLEERATKG 546
             L + A +G
Sbjct: 686 PLLAKLAAEG 695


>gi|386333461|ref|YP_006029631.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
 gi|334195910|gb|AEG69095.1| fused 3-hydroxybutyryl-CoA epimerase [Ralstonia solanacearum Po82]
          Length = 1292

 Score =  301 bits (771), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 181/483 (37%), Positives = 264/483 (54%), Gaps = 8/483 (1%)

Query: 66   LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
            L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR L H F
Sbjct: 811  LQFARNTVAAVAKNFPAPGKCIDAVQAAVEKRFDDGLKFERDLFIELVNTTESRALRHAF 870

Query: 126  FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
            F +RA  K+P+V +     R V KVAVIG G MG GI+   +   I V + E   E L +
Sbjct: 871  FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 929

Query: 186  GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
            GI TI  N      +GKLTQ+K    + +LK  L Y + +D D+VIEAV E + +K+ +F
Sbjct: 930  GIATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 989

Query: 246  SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
             +L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+ 
Sbjct: 990  KKLDEVAKPGAILASNTSTLDVDRIAGFTKRAQDVVGMHFFSPANVMKLLEVVRGKATAK 1049

Query: 306  QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
             V+  +M   K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A+  FG
Sbjct: 1050 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFG 1109

Query: 366  LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
              +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ 
Sbjct: 1110 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 1168

Query: 426  GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
            G  KP P   V  +I +  +   I        ++++EIVE +++ +VNE  ++LEEGI  
Sbjct: 1169 GDRKPYPSQEVNDMIVQHSKDLGIA----RRKISDEEIVERLVYALVNEGAKILEEGIAS 1224

Query: 485  RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERA 543
            +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++S+ Y G  +KP+  L + A
Sbjct: 1225 KASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYSKGYHGEAWKPAPLLRKLA 1284

Query: 544  TKG 546
             +G
Sbjct: 1285 DEG 1287


>gi|421897544|ref|ZP_16327912.1| trifunctonal protein: enoyl-coa hydratase and
           delta3-cis-delta2-trans-enoyl-coa isomerase and
           3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
           MolK2]
 gi|206588750|emb|CAQ35713.1| trifunctonal protein: enoyl-coa hydratase and
           delta3-cis-delta2-trans-enoyl-coa isomerase and
           3-hydroxyacyl-coa dehydrogenase [Ralstonia solanacearum
           MolK2]
          Length = 693

 Score =  301 bits (771), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 181/483 (37%), Positives = 264/483 (54%), Gaps = 8/483 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L+ AR      A N P    C+D ++  +      G+  E  +F ELV    SR L H F
Sbjct: 212 LQFARNTVAAVAKNFPAPGKCVDAVQAAVEKRFDDGIQFERDLFIELVNTTESRALRHAF 271

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           F +RA  K+P+V +     R V KVAVIG G MG GI+   +   I V + E   E L +
Sbjct: 272 FGERAAGKIPDVPE-DTPVRKVEKVAVIGAGTMGGGISMNFLNAGIPVTILETRQEALDR 330

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           GI TI  N      +GKLTQ+K    + +LK  L Y + +D D+VIEAV E + +K+ +F
Sbjct: 331 GIATIRKNYENSAKKGKLTQEKVEARMALLKPTLSYDDIRDADLVIEAVFEDMGVKETVF 390

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
             L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+ 
Sbjct: 391 KTLDEVVKPGAILASNTSTLDVDRIAGFTRRAQDVVGMHFFSPANVMKLLEVVRGKATAK 450

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+  +M   K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A+  FG
Sbjct: 451 DVLATVMKTAKAIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDRAMEKFG 510

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
             +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G G Y Y+ 
Sbjct: 511 FAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIVY-SKTADLLCEKGRFGQKTGAGWYDYKV 569

Query: 426 GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
           G  KP P   V  +I   +   ++    + IS  ++EIVE +++ +VNE  ++LEEGI  
Sbjct: 570 GDRKPYPSQEVNDMI--VQHSKDLCIARRKIS--DEEIVERLVYALVNEGAKILEEGIAS 625

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERA 543
           +ASD+D   + G  FP +RGG + +AD VG   V  ++ ++ + Y G  +KP+  L++ A
Sbjct: 626 KASDIDMVYLTGYGFPLFRGGPMLYADTVGLYNVAQAMHRYGKGYHGEAWKPAPLLQKLA 685

Query: 544 TKG 546
            +G
Sbjct: 686 DEG 688


>gi|307729675|ref|YP_003906899.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1003]
 gi|307584210|gb|ADN57608.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1003]
          Length = 694

 Score =  301 bits (770), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 188/550 (34%), Positives = 294/550 (53%), Gaps = 16/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + S++    GL D +V  + L   +  +A  + A+  P     H T +   + 
Sbjct: 152 MIVSGTPVDSQQLAGSGLFDELVQGD-LATTALAFARKVGAKEGP-----HPTVRERKIE 205

Query: 61  E--AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
              A   L+ AR      A + P    C+D +E G+ HG   G+  E + F  LV    S
Sbjct: 206 HPNAEGFLQFARNSVAAVAKHFPAPLKCIDAVEAGVKHGFDKGLAVERECFTALVQTPES 265

Query: 119 RGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           R L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   I   I V L E
Sbjct: 266 RALRHAFFGERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFINAGIPVTLLE 323

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E L +G+ TI +N    V +GKL  +     + ++   L Y + K  D+++EAV E 
Sbjct: 324 MKQEALERGLATIRSNYEASVKKGKLKPEAVAERMALIAPTLSYDDLKSADLIVEAVFEE 383

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+
Sbjct: 384 LGVKEQVFRRLDEIARPGAILASNTSTLDVNRIASFTKRPQDVVGMHFFSPANVMKLLEV 443

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR + T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++
Sbjct: 444 VRGKETAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQV 503

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L ++GR G+  G
Sbjct: 504 DRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDMHY-SKIADRLCETGRFGQKTG 562

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
            G Y Y+ G +    PS L  ++E     +   G +   + ++EIVE ++F +VNE  ++
Sbjct: 563 GGWYDYKPGER-TAQPSKL--VDEMIVAYSKETGTERRKIGDEEIVERLVFALVNEGAKI 619

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPS 536
           LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  +++++ +Q  G+ ++ +
Sbjct: 620 LEEGIASKASDIDMVYLTGYGFPLHRGGPMLYADTVGLYNVERAIRRYAAQRNGDAWQLA 679

Query: 537 RFLEERATKG 546
             + E A  G
Sbjct: 680 PRIAELAATG 689


>gi|94310793|ref|YP_584003.1| multifunctional 3-hydroxybutyryl-CoA epimerase
           /delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
           dehydrogenase [Cupriavidus metallidurans CH34]
 gi|430809384|ref|ZP_19436499.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
 gi|93354645|gb|ABF08734.1| fused 3-hydroxybutyryl-CoA epimerase and
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and
           enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase
           [Cupriavidus metallidurans CH34]
 gi|429498193|gb|EKZ96707.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
          Length = 693

 Score =  301 bits (770), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 192/533 (36%), Positives = 283/533 (53%), Gaps = 18/533 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW--IRSLHRTDKLGS 58
           M++   +I SE+     L D +V  + +L  +  +A  +AA   P+  +R L    +   
Sbjct: 152 MIVSGTAIPSEKFAGSKLFDEIVDGD-VLPAAVKFAQSVAAAPGPYPKVRDLKVRHE--- 207

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
              A   L  AR      A N P    C+D +   +     +G+  E   F  LV    S
Sbjct: 208 --NAEGFLAFARNTVAAVAKNFPAPLKCVDAVAASL-KPFEAGLKDERDGFMYLVGTPES 264

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           R L H FF +RA SK+P+V + G   R + +VAVIG G MG GI    +   I V + E+
Sbjct: 265 RALRHAFFGERAASKIPDVPE-GTPVRKIERVAVIGAGTMGGGITMNFLNAGIPVTMLEM 323

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E L +G+ TI  N      +GKLTQ+K    + +L   + Y + K+ D+VIEAV E +
Sbjct: 324 KQEALERGVATIRRNYENSAKKGKLTQEKVEQRMGLLTTTMSYDDIKNADLVIEAVFEEM 383

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ +F +L++      ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+V
Sbjct: 384 GVKETVFKKLDEVMKDGAILASNTSTLDVNKIASFTRRPQDVVGMHFFSPANVMKLLEVV 443

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+T   V+  +M +GK IKK  VV G C GF  NR    YS+ A  L+  G    ++D
Sbjct: 444 RGEKTGKDVLATVMQIGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVD 503

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            AI  FG  +GPF++ DLAG  +  A  K      PD  + S   D L + GR G+  G 
Sbjct: 504 KAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADKLCEMGRFGQKTGA 562

Query: 419 GLYTYEKGS-KPKPDPSVLP-IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           G Y Y+ G  KP P+  V   I+E  + L     G     ++++EIVE ++F +VNE  +
Sbjct: 563 GWYDYKAGDRKPYPNKQVNDMIVEHSKEL-----GITRRKISDEEIVERLVFALVNEGAK 617

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           +LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  S+K++++ Y
Sbjct: 618 ILEEGIASKASDIDMVYLTGYGFPLFRGGPMLYADQVGLYNVAQSMKRYAKGY 670


>gi|359797543|ref|ZP_09300127.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Achromobacter arsenitoxydans SY8]
 gi|359364654|gb|EHK66367.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Achromobacter arsenitoxydans SY8]
          Length = 695

 Score =  300 bits (769), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 185/551 (33%), Positives = 291/551 (52%), Gaps = 20/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA----RRKPWIRSLHRTDKL 56
           M+    +I +E     GL+D V  S+ L + +  +AL ++A     R+   + L      
Sbjct: 154 MICGGDAIDAETAADCGLLDEVYGSD-LRQRAAAYALKVSAVPLDGRRVGRQPLAAPADA 212

Query: 57  GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
           G    AR+  + AR      AP      AC+  +E         G+  E + F ELV   
Sbjct: 213 GVYERARQ--EAARRYRGCVAP-----LACVACVEHAAGATLQDGLAFERERFLELVNGG 265

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
            S+   H+FFA+RA  K+P           +RKV V+G G MG GIA +     + VVL 
Sbjct: 266 QSKAQRHLFFAERAAVKLPPEWRAA---GAIRKVGVVGAGTMGGGIAMSLANAGLDVVLI 322

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E +++ L +G   I  N      +GKL+  +       ++  LD  E +D D+VIEA  E
Sbjct: 323 ERDAQALERGWSAIRKNYAATAAKGKLSAVQVEERQGRIRASLDMDELRDADLVIEAAFE 382

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +K+++F  L++ C P  ILA+NTS +D++ +   T    +++G HFFSPA+VM LLE
Sbjct: 383 DMGVKRQVFEALDRICKPGAILASNTSRLDVDQIAGFTGRPAQVLGTHFFSPANVMRLLE 442

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +V+   T   V+  +  + + + K+PV+VG C GF  NR   PY++ A  L+  G    +
Sbjct: 443 VVKGRETDGNVVAAVFKLARAMGKLPVLVGVCDGFVGNRMVSPYTREAHFLLEEGATPSQ 502

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +D A++ FGL +GP ++ D+AG  ++ A  K    + P     S + D L + GR G+  
Sbjct: 503 VDGALQRFGLAMGPLRMADMAGLDISWAFRKRTASSRPADLRYSRVADSLCEQGRFGQKT 562

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G G Y YE GS+ P  D  VL +IE C R   +    +  +VT++EIV+  ++ +VNE  
Sbjct: 563 GSGFYRYEAGSRTPLEDADVLALIERCAREDGV----ERRAVTDEEIVQRTMYALVNEGA 618

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R+LEEGI  RASD+D   V G  FP++RGG +F+AD  G   V T+++++   +G  ++P
Sbjct: 619 RILEEGIARRASDIDVIYVNGYGFPAHRGGPLFYADQQGLPEVLTTIRRFHAEHGELWRP 678

Query: 536 SRFLEERATKG 546
           +  LE    +G
Sbjct: 679 APLLERLVAEG 689


>gi|70728857|ref|YP_258606.1| enoyl-CoA hydratase [Pseudomonas protegens Pf-5]
 gi|68343156|gb|AAY90762.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           family protein [Pseudomonas protegens Pf-5]
          Length = 706

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 184/550 (33%), Positives = 282/550 (51%), Gaps = 14/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + + E   LG++D +   E+ L     +A ++       +R       LG   
Sbjct: 157 LMLSGRHLNAREALDLGVVDRLAEGEDALAAGLAYARELVDSHA-GVRRTRDARALGDQH 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             RE +  AR Q    A  +   Q  +  +E  +      G+ +E ++F+E +      G
Sbjct: 216 LQREQINAAREQLTHKAKGLLSPQNIIRAVEAALDRPFDQGLEEERRLFQECLDSPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R   K P  T I  +PR + +VAV+GGG MG+GIA + +   + V + E + 
Sbjct: 276 LVHAFFAEREVLKAPE-TRIA-QPRPIEQVAVVGGGTMGAGIAVSALDAGLQVTMIERDQ 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           + L +G   +E    GL+ +G+L        L   +  LDY +    D+VIEAV E +  
Sbjct: 334 QALDRGRGNVEKVYDGLIEKGRLDAAGKAATLARFRASLDYQDLARADLVIEAVFEDMAA 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F EL++ C P  +LA+NTS +DLN + +  S    +IG HFFSPA++M LLEIV  
Sbjct: 394 KQAVFKELDRVCKPGAVLASNTSYLDLNAIADSVSRPADVIGLHFFSPANIMKLLEIVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + +  V+     + K ++KVPV  G C GF  NR    Y Q+A  ++  G   ++ID A
Sbjct: 454 AKVAPDVVATAFELAKKLRKVPVRAGVCDGFIGNRILAVYRQAADYMMEDGASPYQIDQA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF---PDRSFQSPLVDLLLKSGRNGKANG 417
           +R FG P+GPFQ+ DLAG  +  AT K   KA    PD  +   + D L + G  G   G
Sbjct: 514 LRDFGFPMGPFQVADLAGGDIGWATRKR--KAATRNPDARYVQ-IADRLCERGWFGHKTG 570

Query: 418 KGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           +G Y Y +G +    DP VL II+  R  + I P  +P      EI+   +  ++NE   
Sbjct: 571 RGYYLYAQGPRNATQDPEVLAIIDAERARAGITP--RPFG--NPEILRRYMAAMINEGAN 626

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           V+ EGI +R  D+D   + G  FP YRGG + +AD  G   V   ++++++    F+K S
Sbjct: 627 VVHEGIALRPLDVDITFIHGYGFPRYRGGPLKYADQYGLPQVLADIREFAEQDPLFWKAS 686

Query: 537 RFLEERATKG 546
             LE+   +G
Sbjct: 687 LLLEQLVERG 696


>gi|414170055|ref|ZP_11425669.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
           49720]
 gi|410884727|gb|EKS32547.1| hypothetical protein HMPREF9696_03524 [Afipia clevelandensis ATCC
           49720]
          Length = 695

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 179/548 (32%), Positives = 297/548 (54%), Gaps = 15/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++  + I++++  K GLI+ +V +   +     +A  I A ++P  R      KL +  
Sbjct: 152 MIVGGEPISAQDALKNGLIEEIVDAPPAVG-GESFARKIVAEKRPLRRLRDDDSKLAAAK 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A   A K +  +       + +   +       +  E ++F +L+  D S+ 
Sbjct: 211 ADRSIFTNAAAAANKRSRGLEAPVTAAEAVSHSLDQPFDQALKTERELFLKLMNGDQSKA 270

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+RA +K+  V D G K R V++VAVIG G MG GIA +     I V + E+  
Sbjct: 271 QRYAFFAERAAAKIDGVPD-GTKGREVKQVAVIGAGTMGGGIAMSFANAGIPVTIIEMAD 329

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++KG +     KD D++IEAV E++ +
Sbjct: 330 EPLKRGLGIMQKNYEATAARGGIPADAPAKRMGLIKGAVGLENVKDADLIIEAVFETMEI 389

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F++L++   P  +LA+NTS +D+N + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 390 KKEVFTKLDQFAKPGAVLASNTSYLDINKIADVTKRPQDVLGMHFFSPANVMKLCEIVRG 449

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+   ++  + + K I KVPVVVG C GF  NR     S+ +   +  G    ++D+ 
Sbjct: 450 AKTAPDALVTAVNIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKFLFEGALPQQVDAV 509

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 510 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 562

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE+GS+ P PDP V  +I+E   L+ +  G K   ++++EI+E +++P++NE  R+LE
Sbjct: 563 YKYEQGSRSPLPDPEVEKLIDET--LAKL--GLKRREISDEEILERMVYPMINEGARILE 618

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS-QLYGNFFKPSRF 538
           E I  R SD+D   + G  +P YRGG +F+AD VG   +   L  ++ Q      +P+  
Sbjct: 619 EKIAARPSDIDVVWLYGYGWPIYRGGPMFYADQVGLKKIADRLSFYAKQTNDPSLEPAPL 678

Query: 539 LEERATKG 546
           L+  A +G
Sbjct: 679 LKRLADEG 686


>gi|338972995|ref|ZP_08628365.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
 gi|338233748|gb|EGP08868.1| enoyl-CoA hydratase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 695

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 179/548 (32%), Positives = 297/548 (54%), Gaps = 15/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++  + I++++  K GLI+ +V +   +     +A  I A ++P  R      KL +  
Sbjct: 152 MIVGGEPISAQDALKNGLIEEIVDAPPAVG-GESFARKIVAEKRPLRRLRDDDSKLAAAK 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A   A K +  +       + +   +       +  E ++F +L+  D S+ 
Sbjct: 211 ADRSIFTNAAAAANKRSRGLEAPVTAAEAVSHSLDQPFDQALKTERELFLKLMNGDQSKA 270

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+RA +K+  V D G K R V++VAVIG G MG GIA +     I V + E+  
Sbjct: 271 QRYAFFAERAAAKIDGVPD-GTKGREVKQVAVIGAGTMGGGIAMSFANAGIPVTIIEMAD 329

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++KG +     KD D++IEAV E++ +
Sbjct: 330 EPLKRGLGIMQKNYEATAARGGIPADAPAKRMGLIKGAVGLENVKDADLIIEAVFETMEI 389

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F++L++   P  +LA+NTS +D+N + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 390 KKEVFTKLDQFAKPGAVLASNTSYLDINKIADVTKRPQDVLGMHFFSPANVMKLCEIVRG 449

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+   ++  + + K I KVPVVVG C GF  NR     S+ +   +  G    ++D+ 
Sbjct: 450 AKTAPDALVTAVNIAKKIAKVPVVVGVCDGFVGNRMLAARSKQSEKFLFEGALPQQVDAV 509

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 510 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 562

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE+GS+ P PDP V  +I+E   L+ +  G K   ++++EI+E +++P++NE  R+LE
Sbjct: 563 YRYEQGSRSPLPDPEVEKLIDET--LAKL--GLKRREISDEEILERMVYPMINEGARILE 618

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS-QLYGNFFKPSRF 538
           E I  R SD+D   + G  +P YRGG +F+AD VG   +   L  ++ Q      +P+  
Sbjct: 619 EKIAARPSDIDVVWLYGYGWPIYRGGPMFYADQVGLKKIADRLSFYAKQTNDPSLEPAPL 678

Query: 539 LEERATKG 546
           L+  A +G
Sbjct: 679 LKRLADEG 686


>gi|430805524|ref|ZP_19432639.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Cupriavidus sp. HMR-1]
 gi|429502228|gb|ELA00543.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Cupriavidus sp. HMR-1]
          Length = 715

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 252/471 (53%), Gaps = 7/471 (1%)

Query: 77  APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 136
           A N     AC+  +E         G+  E   F+ LV  + S+ L H+FFA+R   K   
Sbjct: 243 ARNAIAQNACIRCVEAATQLPIADGLAFERAQFEALVAGNESKALRHIFFAEREAPKFAE 302

Query: 137 VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRG 196
                L+P  + +VAVIG G MG GIA + +   I V+L E     L +G+  I  N   
Sbjct: 303 GKGQALRP--IERVAVIGSGTMGVGIAMSFVNAGIPVMLIEREQAALDRGVALIRRNYEI 360

Query: 197 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 256
              +GKL   + +  +  +   L +    D D+V+EAV E + +KQ IF  L+  C P  
Sbjct: 361 TAAKGKLAPQQIDARMGRITPTLAFEAVADADLVVEAVFEDMAVKQAIFERLDALCKPSA 420

Query: 257 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 316
           ILATNTS ++++ +   T     +IG HFFSPA+VM LLE+VR + T A VI   M + +
Sbjct: 421 ILATNTSRLNIDTIAASTKRPGDVIGLHFFSPANVMKLLEVVRGQATHADVIASCMAMAQ 480

Query: 317 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 376
            I+K+PV+V  C GF  NR   PY + A  L+  G    ++D A+  FG+ +GP  + DL
Sbjct: 481 RIRKIPVLVRVCEGFVGNRMLTPYWREAGFLLEEGASPLQVDRALTQFGMAMGPLTMADL 540

Query: 377 AGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSV 435
           AG  +  AT K      P     S + D + + GR G+    G Y YE GS+ P PDP +
Sbjct: 541 AGMDINWATRKRLAPTRPAHLRYSAVADRICELGRFGQKTNGGYYRYEPGSRTPIPDPQI 600

Query: 436 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 495
             +IE+C R + I    +P  V ++EIVE  +  ++NE  R+L+EGI  RASD+D   V 
Sbjct: 601 DALIEDCAREAGI--ARRP--VADEEIVERCMLALINEGARILDEGIAQRASDIDVVYVH 656

Query: 496 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           G  FP++RGG +F+A+ +G  +V T ++    ++G  ++P+  LE    +G
Sbjct: 657 GYGFPAWRGGPMFYAETLGLAHVLTRIRALQDVHGAHWEPAPLLERLVAEG 707


>gi|170738585|ref|YP_001767240.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
           4-46]
 gi|168192859|gb|ACA14806.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium sp.
           4-46]
          Length = 691

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 183/532 (34%), Positives = 276/532 (51%), Gaps = 16/532 (3%)

Query: 16  LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           +GLID +   E L   +  +A  + A  +P  +   R ++L    +A  +    R +  +
Sbjct: 169 MGLIDELAPEEGLRAHAVAFAQRVVAEGRPLTKIRDRDERLAEGRDAPGLFDAFRKENAR 228

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
                   +AC+  +E         G+  E + F +LV    S    +VFFA+R T+K+P
Sbjct: 229 RMRGFEAPEACIACVEAACRLPFPQGLAFEREQFLKLVSGSQSAAQRYVFFAERQTAKIP 288

Query: 136 NV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 194
           +V  D   +P  + +V VIG G MG GIA   +   I V + E   E L +G+  I +N 
Sbjct: 289 DVPEDTPTRP--IARVGVIGAGTMGGGIAMNFLNAGIPVTIVEARREALDRGLAVIRSNY 346

Query: 195 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 254
                +G+L  +     + +L   L   + KD D++IEAV E + +K++IFS+L++   P
Sbjct: 347 ENTARKGRLRPEDVQTRMGLLADTLAIEDLKDCDLIIEAVFEDMGIKKEIFSKLDRVAKP 406

Query: 255 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 314
             ILA+NTS +D++ +   T     +IG HFFSPA+VM LLE+VR  RT+  VI   M V
Sbjct: 407 GAILASNTSYLDIDEIASVTGRPADVIGMHFFSPANVMRLLEVVRGARTAKDVIATAMQV 466

Query: 315 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 374
           G+ + K+ V+VG C GF  NR      + A  L+  GV  + +D  I  FGLP+GPF + 
Sbjct: 467 GRKVGKIAVLVGVCHGFVGNRMLAERQREANRLILEGVTPWDVDRVIYEFGLPMGPFAMS 526

Query: 375 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPS 434
           DLAG  +    S+E +++   R       DLL +  R G+  G G Y Y+   K  P P 
Sbjct: 527 DLAGLDI--GWSRETNRSESVR-------DLLCEIDRRGQKTGAGFYDYDAKRKASPSPV 577

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
              II        +    KP S  ++EI+E  L+P+VNE  ++L+EG  +RASD+D   +
Sbjct: 578 TEEIIARVAARQGVAR--KPAS--DQEILERCLYPMVNEGAKILDEGKAIRASDIDIVWI 633

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            G  +P YRGG +FWAD +G   V   L+ +   YG+ F PS  LE  A +G
Sbjct: 634 NGYGWPVYRGGPMFWADGIGLPTVLERLRAYQAEYGDAFAPSPLLERLAAEG 685


>gi|127513792|ref|YP_001094989.1| 3-hydroxyacyl-CoA dehydrogenase [Shewanella loihica PV-4]
 gi|126639087|gb|ABO24730.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Shewanella loihica PV-4]
          Length = 708

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 182/518 (35%), Positives = 279/518 (53%), Gaps = 12/518 (2%)

Query: 35  WALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGI 94
           +A ++ A+ KP       +    ++S   E+    R    + +      + C+  +E   
Sbjct: 189 FAQELVAQHKPKRSCFEMSVDTSNISS--EIFNEFRAAIARRSRGYYAPERCIQAVEAAC 246

Query: 95  VHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIG 154
                 G+ +E ++F E +    +R   H+FFA+R  +K+P +       R +RKVAVIG
Sbjct: 247 ELPLAEGLKREHQLFMECLDTPQARAQQHLFFAERGVAKIPGINPKTTATREIRKVAVIG 306

Query: 155 GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 214
            G MG GIA   I   I   + ++N E L +G+  I  N    + +GKL+Q + +  + +
Sbjct: 307 SGTMGGGIAMNFINVGIPTQILDLNGEALERGLGVIRKNYEYTLKKGKLSQAQLDERMAL 366

Query: 215 LKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 274
           L G  DY++  DVD+VIEAV E + +K+++F  L+  C P  ILATNTST+D++ +  +T
Sbjct: 367 LSGTTDYADIADVDLVIEAVFEKMEIKKQVFKTLDATCKPGAILATNTSTLDVDEIAAET 426

Query: 275 SSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 334
           S    ++G HFFSPA+VM LLEIVR  +T+   +L  + + + IKKVPVV G C GF  N
Sbjct: 427 SRPQDVLGLHFFSPANVMRLLEIVRANKTAPDALLTTVQLAQRIKKVPVVSGVCWGFIGN 486

Query: 335 RAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP 394
           RA   Y + +  L+  G    +ID     FG+P+G   ++DLAG  V   T +E  KAF 
Sbjct: 487 RATDSYLRESMSLILEGASPAQIDKVHTEFGMPMGLPSMVDLAGIDVGILT-REDRKAFT 545

Query: 395 ---DRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPG 451
              D S  + L  L  K  R G+  G+GLY YE G   + DP VL +  E  +   +   
Sbjct: 546 TDLDPSHFAILHKLYAKQ-RYGQKTGRGLYIYE-GRDKQEDPEVLELAAEAAKEFGVTR- 602

Query: 452 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 511
             P  ++++EI+E  ++P++NE  R+LEEGI +RASD+D     G  FP +RGG + +AD
Sbjct: 603 RSPEQISDQEILERTIYPIINEGARILEEGIALRASDIDIVLAYGFGFPIFRGGPMQYAD 662

Query: 512 AVGANYVYTSLKKWSQLYGN---FFKPSRFLEERATKG 546
            +G   V T+L K+         +FKP+  LE    +G
Sbjct: 663 EIGLERVLTALNKYRDTLDKGELWFKPAPLLERLVKEG 700


>gi|443468142|ref|ZP_21058378.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
 gi|442897219|gb|ELS24207.1| Enoyl-CoA hydratase [Pseudomonas pseudoalcaligenes KF707]
          Length = 703

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 195/562 (34%), Positives = 297/562 (52%), Gaps = 35/562 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEE-LLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 59
           MM+  + I +   ++LGL+D + + +E LL  +R +A ++  +R P      RT +  + 
Sbjct: 154 MMISGQPIGAGRAFELGLLDRLASGKESLLDDARAFARELLDQRAPA----QRTSRFANP 209

Query: 60  SEAREVLKLARLQA-------KKTAPNM---PQHQACLDVIEEGIVHGGYSGVLKEAKVF 109
           +E+     L++ +A        + AP +       AC   + EG+V        +E ++F
Sbjct: 210 AESVAADFLSQFRAANEPRWKSRLAPRLVLAAVEAACNLPLAEGLV--------REHELF 261

Query: 110 KELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 168
           KE      S  L HVFFA+R   ++P +  DI L  R + KVAVIG G MG GIA   + 
Sbjct: 262 KEAEASKQSAALRHVFFAEREAGRIPGIEADIPL--RRIEKVAVIGAGTMGGGIAMNFVN 319

Query: 169 NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 228
             I V L E   E L  G+  I  N    V RGKLT  +    +++L G LDY++  D D
Sbjct: 320 AGIPVALLEQKGEALDCGLANIRKNYEISVKRGKLTAAQLEQRMELLFGTLDYADLADAD 379

Query: 229 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 288
           +VIEAV E + +KQ++F EL++ C P  ILA+NTS++D++++   TS    +IG HFFSP
Sbjct: 380 LVIEAVFEKLEIKQQVFRELDRLCKPGAILASNTSSLDVDVIAASTSRPQDVIGLHFFSP 439

Query: 289 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 348
           A+VM LLE+VR + T+  V+   M + K I K+PV+ G C GF  NR   PYS+ A  LV
Sbjct: 440 ANVMRLLEVVRGKATAPDVLATTMKIAKRIGKLPVISGVCFGFIGNRMLEPYSREAHRLV 499

Query: 349 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLK 408
             G    ++D  +    L +G F +LDLAG  V          AF        L D L  
Sbjct: 500 LEGATPTQVDKVLTDLDLNMGVFSMLDLAGIDVNFLVRNSNRAAFAHDESYCRLGDELYA 559

Query: 409 SGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
            GR+G+  G+G Y YE G   + D  V+ + E  R    +    +P  V ++EI +  LF
Sbjct: 560 QGRHGQKTGRGFYLYE-GRNRQEDYEVVALAE--RLAGELHVPRRP--VGDQEIHDRCLF 614

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
            ++NE  ++L+EGI +RASD+D   + G  FP++ GG + +A+ +G + V   ++ + + 
Sbjct: 615 MLINEGIQLLDEGIALRASDIDLVWINGYGFPAHLGGPLHYAEQLGLDKVLAGIQHYRRT 674

Query: 529 YGNF----FKPSRFLEERATKG 546
            G +    FKP+  LE     G
Sbjct: 675 LGGYGEMWFKPAALLERLVAAG 696


>gi|73541099|ref|YP_295619.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72118512|gb|AAZ60775.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 693

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 196/551 (35%), Positives = 293/551 (53%), Gaps = 19/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW--IRSLHRTDKLGS 58
           M++   ++ SE+     L D +V  + +L  +  +A ++AA   P+  +R L    +   
Sbjct: 152 MIVSGTAVPSEKFAGTKLFDEIVDGD-VLPAAVKFAQNVAAAPGPYPKVRDLKVRHE--- 207

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                  L  A+      A N P    CL+ +  G +     G+ +E   F  LV    S
Sbjct: 208 --NPEGFLGFAKTTVGAMAKNFPAPLKCLEAVA-GSLKPFEQGLKEERDGFLYLVTTPES 264

Query: 119 RGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           R L H FF +RA SK+P+V +D  L  R + K+AVIG G MG GI+   +   I V + E
Sbjct: 265 RALRHAFFGERAASKIPDVPSDTPL--RKIEKIAVIGAGTMGGGISMNFLNAGIPVTILE 322

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              E L +GI  I  N      +GKLTQ+K    + +L   L Y + KD DMVIEAV E 
Sbjct: 323 TKQEALDRGIGIIRKNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDIKDADMVIEAVFEE 382

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ +F +L++      ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+
Sbjct: 383 MGVKEIVFKKLDEVMKQGAILASNTSTLDVDKIASFTKRPQDVVGMHFFSPANVMKLLEV 442

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR  +T   V+  +M +GK IKK  VV G C GF  NR    YS+ A  L+  G    ++
Sbjct: 443 VRGAKTGKDVLATVMAIGKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQV 502

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D AI  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G
Sbjct: 503 DRAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVDKPDIQY-SKTADLLCEMGRYGQKTG 561

Query: 418 KGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
            G Y Y+ G  KP P+  V  +I +  +   I        ++++EIVE ++F +VNE  +
Sbjct: 562 AGWYDYKAGDRKPYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAK 617

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKP 535
           +LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  S+KK+++ Y G  ++ 
Sbjct: 618 ILEEGIASKASDIDMVYLTGYGFPLFRGGPMLYADQVGLYNVALSMKKYAKGYHGEAWQV 677

Query: 536 SRFLEERATKG 546
           +  L++ A +G
Sbjct: 678 APLLQKLADEG 688


>gi|167644779|ref|YP_001682442.1| 3-hydroxyacyl-CoA dehydrogenase [Caulobacter sp. K31]
 gi|167347209|gb|ABZ69944.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Caulobacter sp. K31]
          Length = 692

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 282/547 (51%), Gaps = 16/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + ++    +GL D++V    L   +  +A  + A  KP  R   +  K+ +  
Sbjct: 155 MVTTGQHVPAKAALAMGLFDSLVEEGALRDGAIAFARVVLAEDKPLTRIRDQNAKVEAAR 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+    R    +        +  +  IE  +      G+ +E ++F EL+    S  
Sbjct: 215 GKPEIFSEFRAANARKFRGFLAPENNIKCIEAAVNLPFDEGLKEERRLFMELMTGTQSAA 274

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             HVFFA+R  +K+P+V  D  + P  V+KV VIG G MG GI+   +   I V + E  
Sbjct: 275 QRHVFFAERQAAKIPDVPDDTPIIP--VKKVGVIGAGTMGGGISMNFLNAGIPVTIIEAK 332

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  I  N      +G+LTQD     + +L   +   +  D D++IEAV E + 
Sbjct: 333 QENLDRGVGVIRKNYENTAKKGRLTQDDVEKRMALLTPSMHLEDLTDCDLMIEAVFELME 392

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L+    P  ILA+NTS +DL+++   TS    +IG HFFSPA+VM LLEIVR
Sbjct: 393 IKKEVFGKLDTIAKPGAILASNTSYLDLDVIAASTSRPQSVIGLHFFSPANVMKLLEIVR 452

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T   VI   M +GK I KV V+VGNC GF  NR      + A+ L+  G   + +D 
Sbjct: 453 GAKTDKSVIATAMRIGKTIGKVAVLVGNCHGFVGNRMLAQRQREAQKLILEGAMPWDVDR 512

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FGLP+GPF + DLAG  +   ++K         S  S + ++L +  R G+ NGKG
Sbjct: 513 VLYDFGLPMGPFAMSDLAGLDIGWDSTK---------SSSSTVREVLCEMDRRGQKNGKG 563

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++    KP   V  +I +      I    +   ++++EI+E  L+P+VNE  ++LE
Sbjct: 564 FYDYDENRVAKPSKEVEQVILDFAEKRQI----QRREISDQEILERCLYPMVNEGAKILE 619

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG  +RASD+D   + G  +P Y GG +FW + VG + V   +K +    G+ FKPS  L
Sbjct: 620 EGKAIRASDIDTVWINGYGWPVYTGGPMFWGELVGLDKVLAKMKAFQAELGDDFKPSALL 679

Query: 540 EERATKG 546
           E    +G
Sbjct: 680 ERLVAEG 686


>gi|337265631|ref|YP_004609686.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
           opportunistum WSM2075]
 gi|336025941|gb|AEH85592.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 690

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 189/548 (34%), Positives = 275/548 (50%), Gaps = 19/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I +EE    GL+DAV   + L   +  +A ++A +  P+     R D+L    
Sbjct: 152 MIVSGTPIGAEEAHAAGLVDAVFEGD-LSTHAVNFARELAPKGGPFTPVRDRDDRLKETD 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A    + A L  K      P   AC   +   +       +  E  +F  L+  D SR 
Sbjct: 211 LAAFDAEAADLARKARGLEAPI--ACAQAVRNAVTLPFDEALAAERALFAGLIASDQSRA 268

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             H+FFA+R  +KVP         R + +V VIG G MG GIA A       V L E + 
Sbjct: 269 QRHLFFAEREAAKVPGKD---TPKRRIARVGVIGAGTMGGGIAMAFANGGFSVTLLETSE 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TIE N    V+RG LT+D     L   KG  DY++  D D+++EAV E + +
Sbjct: 326 EALQRGLATIEKNYAVSVSRGSLTEDAKRQRLAQFKGSTDYADLADCDLIVEAVFEDMAV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +++    P  ILATNTS +D++ +    S    ++G HFFSPA+VM LLEIVR 
Sbjct: 386 KKEVFGKIDAVARPGAILATNTSYLDIDEIAASVSRPQDVVGLHFFSPANVMKLLEIVRA 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   +  ++ + + I KV VVVG C GF  NR        +  L+  G    +ID A
Sbjct: 446 DKTAPDALATVVDLARRIGKVAVVVGVCHGFVGNRMLAARGSESEELLLEGATPSQIDKA 505

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG P+GPFQ+ DLAG  +     K        R   + + D L + GR G+  G+G 
Sbjct: 506 FTDFGWPMGPFQMGDLAGLDIGWRNRKA-------RGQTAVIADTLCEQGRFGQKTGRGF 558

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE G++   PDP V  +I +      I     P ++   EI+E  L+P+VNE  ++LE
Sbjct: 559 YLYEAGARSGIPDPEVEALIRDKAAERGI----APRAIGADEIIERTLYPLVNEGAKILE 614

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRF 538
           EGI  RASD+D   V G  FP  +GG +FWA       +   L+ W Q  G + FKP+  
Sbjct: 615 EGIAARASDIDVVWVNGYGFPIGKGGPMFWAGLERPARIVERLEYWRQRTGKDVFKPAPR 674

Query: 539 LEERATKG 546
           L+  A  G
Sbjct: 675 LKAMAETG 682


>gi|167836289|ref|ZP_02463172.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis MSMB43]
          Length = 694

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 189/526 (35%), Positives = 281/526 (53%), Gaps = 9/526 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  + GL DA+V  + LL  +  +A   AA   P  R     D+     
Sbjct: 152 MIVSGAPVPSEQLAQSGLFDALVEGD-LLDAAVAFARKAAAASGPHPRV---RDREIVHE 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  AK  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 208 NAAGFIQFARNSAKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V       R ++ VAVIG G MG GI    +   + V L E   
Sbjct: 268 LRHAFFGERAASKIPDVP-ADTPAREIKAVAVIGAGTMGGGITMNFLNAGLPVTLLETKQ 326

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI  N    V +GKLTQ+K +  + +++  L Y + KD D+VIEAV E + +
Sbjct: 327 EALDRGVATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIEAVFEELGV 386

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 387 KEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRG 446

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ERT+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D A
Sbjct: 447 ERTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDRA 506

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G 
Sbjct: 507 IEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAGW 565

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y  G +    PS L  ++E     +   G +   + + EIVE +++ +VNE  ++LEE
Sbjct: 566 YDYVPGER-HAKPSKL--VDEMIVAYSNERGLERREIGDDEIVERLVYALVNEGAKILEE 622

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
            I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++
Sbjct: 623 KIASKASDIDMVYLAGYGFPLWRGGPMLYADTVGLYNVERAMRGYA 668


>gi|383758293|ref|YP_005437278.1| 3-hydroxyacyl-CoA dehydrogenase [Rubrivivax gelatinosus IL144]
 gi|381378962|dbj|BAL95779.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Rubrivivax gelatinosus IL144]
          Length = 702

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 173/489 (35%), Positives = 267/489 (54%), Gaps = 8/489 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
            + AR   K  A + P    C+D +E  +     +G+  E ++F  L+    S+ L H F
Sbjct: 219 FQFARNTVKAMARHFPAPAKCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAF 278

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           FA+RA SK+P+V +   + R + KV V+G G MG GI+   +   + V + E  +E L +
Sbjct: 279 FAERAASKIPDVPE-DTQLRRIAKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALER 337

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G+ TI  N    V +GKL +DK    + +L   L Y++  D D+VIEAV E + +KQ++F
Sbjct: 338 GVATIRRNYEAQVRKGKLKEDKYQQRMALLTTTLSYADLADCDLVIEAVYEDLGVKQQVF 397

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
             L++   P  ILA+NTST+DLN +   T     ++G HFFSPA+VM LLE+VR E+T+ 
Sbjct: 398 GALDEVVKPGAILASNTSTLDLNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTAK 457

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+  +M + K I+K  VV G C GF  NR    YS+ A  L+  G    ++D A+ +FG
Sbjct: 458 DVLATVMQLAKTIRKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAFG 517

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
             +GPF++ DLAG  +  A  K      P   + S   DLL + GR G+  G G Y Y  
Sbjct: 518 FAMGPFRMGDLAGNDIGWAIRKRRYVEQPQMRY-SQTADLLCEMGRYGQKTGAGWYDYAP 576

Query: 426 GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 485
           G   K D    P++EE         G    ++++ EIV  +++ +VNE  ++LE+GI  +
Sbjct: 577 G---KRDAIPSPVVEEMVAQHRAGLGITARTISDDEIVHRLVYALVNEGAKILEDGIASK 633

Query: 486 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEER 542
           ASD+D   + G  FP +RGG + +AD+ G   V  ++K +++       F++P+  LE  
Sbjct: 634 ASDIDMVYLTGYGFPLWRGGPMCYADSQGLFNVVQTMKAFARNPLDDAGFWEPAPLLERL 693

Query: 543 ATKGIPLSA 551
           A +G   +A
Sbjct: 694 AAEGRRFTA 702


>gi|333916713|ref|YP_004490445.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
 gi|333746913|gb|AEF92090.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
          Length = 705

 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 182/552 (32%), Positives = 292/552 (52%), Gaps = 19/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-----TSEELLKVSRLWALDIAARRKPWIRSLHRTDK 55
           +ML  K ++++     GL+D +V     T+  L+  + L A + A RR    R +   DK
Sbjct: 157 LMLSGKHLSAKAALAAGLVDKLVDGTDATAAGLVYANELLASNTAPRR---TRDIEIADK 213

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
               +   E+  LA   AKK+   +      ++ +   +      G+ KE  +F E +  
Sbjct: 214 A---AALAELDALAAETAKKSR-GLFSPLKIVECVRAAVELPFDEGIAKERALFVECLNS 269

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
               GL+H FFA+R T+K+P        PR   K+AVIGGG MG+GI  + +   + V +
Sbjct: 270 PQRAGLIHAFFAERETAKIPEAK--AAAPRHFAKIAVIGGGTMGAGITVSALDAGLTVTM 327

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E ++E + +G   +E    GL+ +G++T++     +        Y + KDVD+VIEAV 
Sbjct: 328 IERDAESIARGQANVEKVYNGLIAKGRMTEEAKAAVMARYTPSTSYDDIKDVDLVIEAVF 387

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +K+ +F EL++ C P  +LATNTS +D++ +   TS    +IG HFFSPA++M LL
Sbjct: 388 EDLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLL 447

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EIV   + +  V+     + K +KKVPV  G C GF  NR    Y Q+A  ++  G   +
Sbjct: 448 EIVVPAKVAPDVVTTAFELAKRMKKVPVRAGVCDGFIGNRILAVYKQAADYIMEDGASPY 507

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
            ID A+R FG P+GPFQ+ DLAG  +  AT K        ++    + D + + G  G+ 
Sbjct: 508 EIDEAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEVADRVCERGWFGQK 567

Query: 416 NGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            G+G Y Y +G++  +PDP VL I++  R    + P       T +EI+   +  +VNE 
Sbjct: 568 TGRGFYLYPQGARVGQPDPEVLAIVDAERAKKGVTPR----KFTPEEIMRRYMAAMVNEG 623

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            +V+EEGI +R  D+D   + G  FP +RGG + WAD  G + V   ++++++    F+K
Sbjct: 624 AKVVEEGIALRPLDVDVTFLSGYGFPRFRGGPMKWADMQGLDKVLADIREFAKEDALFWK 683

Query: 535 PSRFLEERATKG 546
           P+  LE+   +G
Sbjct: 684 PAPLLEKLVAEG 695


>gi|424903808|ref|ZP_18327321.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis MSMB43]
 gi|390931681|gb|EIP89082.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis MSMB43]
          Length = 692

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 189/526 (35%), Positives = 281/526 (53%), Gaps = 9/526 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  + GL DA+V  + LL  +  +A   AA   P  R     D+     
Sbjct: 150 MIVSGAPVPSEQLAQSGLFDALVEGD-LLDAAVAFARKAAAASGPHPRV---RDREIVHE 205

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR  AK  A + P    C+D IE G++ G   G+  E   F  LV    SR 
Sbjct: 206 NAAGFIQFARNSAKAVAQHYPAPHKCIDAIEAGVLQGFDKGLAFERDCFVALVQTPESRA 265

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V       R ++ VAVIG G MG GI    +   + V L E   
Sbjct: 266 LRHAFFGERAASKIPDVP-ADTPAREIKAVAVIGAGTMGGGITMNFLNAGLPVTLLETKQ 324

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI  N    V +GKLTQ+K +  + +++  L Y + KD D+VIEAV E + +
Sbjct: 325 EALDRGVATIRRNYDAQVKKGKLTQEKLDARMALIRPTLAYDDLKDADLVIEAVFEELGV 384

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 385 KEQVFRRLDEVAKPGAILASNTSTLDVNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRG 444

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ERT+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D A
Sbjct: 445 ERTAKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDRA 504

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G 
Sbjct: 505 IEKFGFAMGPFRMSDLAGNDIGWAIRKRRYVEQPDLHY-SKIADRLCEQGRFGQKTGAGW 563

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y  G +    PS L  ++E     +   G +   + + EIVE +++ +VNE  ++LEE
Sbjct: 564 YDYVPGER-HAKPSKL--VDEMIVAYSNERGLERREIGDDEIVERLVYALVNEGAKILEE 620

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
            I  +ASD+D   + G  FP +RGG + +AD VG   V  +++ ++
Sbjct: 621 KIASKASDIDMVYLAGYGFPLWRGGPMLYADTVGLYNVERAMRGYA 666


>gi|163744419|ref|ZP_02151779.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Oceanibulbus indolifex HEL-45]
 gi|161381237|gb|EDQ05646.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Oceanibulbus indolifex HEL-45]
          Length = 698

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 164/452 (36%), Positives = 254/452 (56%), Gaps = 8/452 (1%)

Query: 90  IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRK 149
           ++ G+      G+  E ++F EL+  D  +G++H FF++RA S +P +   G++PR ++ 
Sbjct: 234 VQAGVEKPFEEGMKAERRIFSELMNTDQRQGMIHAFFSERAVSNLPELK--GVEPRTLKA 291

Query: 150 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 209
           + VIGGG MG+GIATA +L+   VVL E+  E        I  N++G + RGK+ Q K +
Sbjct: 292 IGVIGGGTMGAGIATAALLSGFNVVLIEMKDEAAKAAHDRISGNLQGALKRGKIDQAKFD 351

Query: 210 NAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 268
               + L    DY+   DVD+V+EAV E + +K+++F +L+  C P C+LA+NTS +D++
Sbjct: 352 TLTGEALTVSTDYASLSDVDLVVEAVFEDMDVKKQVFGKLDAVCKPGCVLASNTSYLDVD 411

Query: 269 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 328
            + + TS    +IG HFFSPAHVM LLE+V  ++T+  V+     +GK + K+ V  G C
Sbjct: 412 EIADSTSRPADVIGLHFFSPAHVMKLLEVVVADKTAPDVVATGFALGKALGKISVRAGVC 471

Query: 329 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 388
            GF  NR    Y  +A  +V  G   ++ID+A+  FG  +GPF + DLAG  +  AT K 
Sbjct: 472 DGFIGNRILATYRTAADHMVLDGASPYKIDAALEKFGFAMGPFAVADLAGLDIGWATRKR 531

Query: 389 FDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSN 447
                         +D L + G  G+  G+G Y YEKG +   P+P +  +IEE ++   
Sbjct: 532 KAATRHPEERVPTYIDRLCEQGHFGQKTGQGYYIYEKGKRGGTPNPEITRLIEEEQKERG 591

Query: 448 IMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIV 507
           I     P   T+ EIV   +  +VNE+ +VLEEGI  R  D+D   + G  FP Y GG +
Sbjct: 592 IT----PREFTDAEIVRRYMSAMVNEAAKVLEEGIAKRPLDIDMTLLFGYGFPRYWGGPM 647

Query: 508 FWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
            WAD  G   V  +++ +++    F+KP+  L
Sbjct: 648 KWADIQGLPNVLAAIEGFAEKDPWFWKPAPLL 679


>gi|222112189|ref|YP_002554453.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax ebreus TPSY]
 gi|221731633|gb|ACM34453.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax ebreus
           TPSY]
          Length = 705

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 177/547 (32%), Positives = 285/547 (52%), Gaps = 9/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K ++++     GL+D +V   + +     +A ++ A+     R+  R  K+   +
Sbjct: 157 LMLSGKHLSAKAAAAAGLVDRLVEGTDPVAAGLAYANELLAQGAQPRRT--RDLKIADQA 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            AR  L    L+  K    +      ++ +   +      G+ KE  +F E +     +G
Sbjct: 215 AARAELDALALETAKKTRGLFSPGKIVECVRAAVELPFDEGIAKERALFVECLNSPQRQG 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R T+K+P        PR   K+A+IGGG MG+GI  + +   + V + E ++
Sbjct: 275 LVHAFFAERETAKIPEAQ--AAAPRHFAKIAIIGGGTMGAGITVSALDAGLTVTMIERDA 332

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E + +G K +E    GL+ +G++T +     L        Y +  DVD+VIEAV E + +
Sbjct: 333 ESIARGQKNVEKVYDGLIAKGRMTAEGKAAILARYTPSTRYDDIADVDLVIEAVFEDLEV 392

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F EL++ C P  +LATNTS +D++ +   TS    +IG HFFSPA++M LLEIV  
Sbjct: 393 KKAVFKELDRVCKPGAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVP 452

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + +  V+     + K +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID A
Sbjct: 453 AKVAPDVVTTAFALAKKMKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEIDEA 512

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG  +GPFQ+ DLAG  +  AT K        ++    + D + + G  G+  G+G 
Sbjct: 513 VRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPQARYVEVADRVCERGWFGQKTGRGF 572

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G++  +PDP VL I++  R    I     P   T  EI+   +  +VNE  +V++
Sbjct: 573 YLYPQGARVGQPDPEVLAIVDAERAKKGIT----PRQFTADEIMRRYMAAMVNEGAKVVQ 628

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI +R  D+D   + G  FP +RGG + WAD  G + V   ++ +++    F+KP+  L
Sbjct: 629 EGIALRPLDVDVTFLSGYGFPRWRGGPMKWADMTGLDKVLADIRAFAKEDPLFWKPAPLL 688

Query: 540 EERATKG 546
           E+   +G
Sbjct: 689 EQLVAEG 695


>gi|365898261|ref|ZP_09436229.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. STM 3843]
 gi|365421006|emb|CCE08771.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. STM 3843]
          Length = 698

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 182/549 (33%), Positives = 297/549 (54%), Gaps = 18/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSL 59
           M++    I + E  K GLI+ +V  E        +A  + A  +P +R L   D KL + 
Sbjct: 152 MIVGGDPIGAAEAHKAGLIEEIV--EGPASGGEAFARKVVAEGRP-LRKLRDDDSKLAAA 208

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              R +   A     K +  +    A  D +   I      G+ KE + F  L+  D S+
Sbjct: 209 KADRSIFTSAVAALTKKSRGLEAPLAAADAVGYAIDLPFDEGLKKEREDFLRLLTSDQSK 268

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              + FFA+R  SK+  V + G K R V++VA+IG G MG GIA +     + V L E  
Sbjct: 269 AQRYAFFAEREASKIAGVPE-GTKSRPVQRVAIIGAGTMGGGIAMSFANAGVPVTLIETG 327

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  ++ N      RG +  D     + ++ GV+     +D D+VIEAV E++ 
Sbjct: 328 EEQLKRGLGIMQKNWEATAARGGIPADAPAKRMALINGVVGLENVRDADLVIEAVFETMA 387

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  +LA+NTS ++++ + ++TS    ++G HFFSPA+VM L EIVR
Sbjct: 388 VKKEVFGKLDQFAKPGAVLASNTSYLNIDEIAKQTSRPQDVLGMHFFSPANVMKLCEIVR 447

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+T+   ++  +++ + I KVP VVG C GF  NR      + A  L+  G    ++D+
Sbjct: 448 AEKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDA 507

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG
Sbjct: 508 VVTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKG 560

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE GS+ P PDP V  +I+E   L+ +  G K   V+++EI+E +++P++NE  ++L
Sbjct: 561 YYKYEAGSRAPLPDPDVEKLIDET--LARL--GLKKRVVSDEEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
            EGI  R SD+D   + G  +P YRGG ++WAD VG  ++   L  +++   +   +P+ 
Sbjct: 617 AEGIAARPSDIDVVWLYGYGWPIYRGGPMYWADTVGLKHIADRLAVYAKETSDPSLEPAP 676

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 677 LLKKLADEG 685


>gi|445497027|ref|ZP_21463882.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
 gi|444787022|gb|ELX08570.1| peroxisomal bifunctional enzyme [Janthinobacterium sp. HH01]
          Length = 695

 Score =  298 bits (763), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 193/550 (35%), Positives = 293/550 (53%), Gaps = 15/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSE-ELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGS 58
           M++    + S++     L D V  ++ +L+  +  +A  IA AR  P +R     D+   
Sbjct: 152 MIVSGTPVLSDKLAGTALFDQVFAADADLVSSAVAFAEKIADARPLPKVR-----DRKVD 206

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                  L+ +R   K  A   P    C++ +   +      G+  E + F  L+    S
Sbjct: 207 YPNHEAFLQFSRNTVKAMAGPFPAPLECVETVAASVTMKFEDGMKFERERFLHLIQTTES 266

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H FFA+R  SKVP+V       R +++ AVIG G MG GIA   +   I VV+ E 
Sbjct: 267 KALRHAFFAERVASKVPDVP-ADTPTRAIKQAAVIGAGTMGGGIAMNFLNAGIPVVMLET 325

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E L KG+ TI  N    + +GKLTQ+K +  + ++ G L Y +    D+V+EAV E +
Sbjct: 326 KQEALDKGLATIRKNYENTMKKGKLTQEKFDQRMALVSGTLAYEDIGQADIVVEAVFEDM 385

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ +F +L++   P  ILA+NTST+DLN +   T     +IG HFFSPA+VM LLEIV
Sbjct: 386 GVKETVFRKLDEVMKPGAILASNTSTLDLNQIANFTKRPQDVIGTHFFSPANVMKLLEIV 445

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R  +T   V+   + + K +KK  VV G C GF  NR    YS+ A  L+  G    ++D
Sbjct: 446 RGAQTGKDVLATALALSKKLKKTGVVSGVCDGFIGNRMIEQYSRQAGFLLEEGALPEQVD 505

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+  FG  +GPF++ DLAG  +  A  K      P+ S+ S   DLL + GR G+  G 
Sbjct: 506 KAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPEISY-SRTADLLCEMGRFGQKTGA 564

Query: 419 GLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y Y+ G  K  P+  V  +I   +  ++I    + IS  ++EIVE +++ +VNE+  +
Sbjct: 565 GWYDYKAGDRKAYPNEQVNAMI--VQHSADIGVARRKIS--DQEIVERLVYSMVNEAAHI 620

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPS 536
           LEEGI +RASD+D   + G  FP +RGG +F+AD VG   V  ++ K++Q + G  +KP+
Sbjct: 621 LEEGIALRASDIDMVYLTGYGFPLFRGGPMFYADTVGLPNVLAAINKYAQGHQGGAWKPA 680

Query: 537 RFLEERATKG 546
             L   A +G
Sbjct: 681 PLLVRLAEEG 690


>gi|385209669|ref|ZP_10036537.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
 gi|385182007|gb|EIF31283.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
          Length = 694

 Score =  298 bits (763), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 179/528 (33%), Positives = 284/528 (53%), Gaps = 13/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL D +   + L + +  +A  + A+  P  +     D+     
Sbjct: 152 MIVSGTPVMSEKLADSGLFDELAQGD-LAEAALAFARKVGAKEGPHPKV---RDRKIEHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A ++P    C+D +E G+ +G   G+  E + F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVAAVAKHLPAPHKCIDAVEAGVQNGFDKGLAFERECFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V +D  +  R + +VAVIG G MG GIA   I   I V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPSDTPV--RDIDQVAVIGAGTMGGGIAMNFINAGIPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKL  +     + ++   L Y + K+ D+++EAV E + 
Sbjct: 326 QEALDRGLATIRKNYEASVRKGKLKPEALEQRMALITPTLSYDDLKNADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  GV   ++D 
Sbjct: 446 GKETAKDVLATVMKLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGVLPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L ++GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKIADRLCETGRFGQKTGGG 564

Query: 420 LYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y+ G +   P   V  +I    + +N     +   ++++EIVE ++F +VNE  ++L
Sbjct: 565 WYDYKAGDRTAYPSKVVDDMIVAFSKEAN----AERRKISDEEIVERLVFALVNEGAKIL 620

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           EEGI  +ASD+D   + G  FP YRGG + +AD VG   V  ++++++
Sbjct: 621 EEGIASKASDIDMVYLTGYGFPLYRGGPMLYADTVGLYNVERAIRRYA 668


>gi|254503061|ref|ZP_05115212.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Labrenzia alexandrii DFL-11]
 gi|222439132|gb|EEE45811.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Labrenzia alexandrii DFL-11]
          Length = 699

 Score =  298 bits (763), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 187/548 (34%), Positives = 297/548 (54%), Gaps = 18/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   K +++++  + GL+DAV   EE     R  AL  A        S  +T +L + +
Sbjct: 159 MITSGKPVSAQKALESGLVDAV---EE--GAPRDLALKAAQALADGTLSHRKTGELDTDA 213

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           + ++ ++  R + +KT P +     C+D +E   +     G+ KE  +F++ +      G
Sbjct: 214 D-QQAIEAYRKKLQKTQPLLFSPHRCVDAVEASTLPLA-DGLKKERSLFQDCMESPQRAG 271

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+RA SK+P   +    PR + K+ VIGGG MGSGIATA +L    V L E + 
Sbjct: 272 LIHAFFAERAVSKIPEAKET---PRQIAKIGVIGGGTMGSGIATACLLAGFDVTLTERDQ 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVP 239
             L +G+ TI  N+ G V RGKL  DK +  L   L   ++     + D++IEAV E + 
Sbjct: 329 GGLDRGLATIAKNLDGAVKRGKLAADKRDQILSNNLSSAVELGALSEADLIIEAVFEEMD 388

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ IF+EL+K      +LA+NTS +D+N +   TS    +IG HFFSPAHVM LLE+V 
Sbjct: 389 VKRSIFTELDKVAKQGAVLASNTSYLDINEIAAVTSRPQDVIGLHFFSPAHVMRLLEVVV 448

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            ++T+   +     + K +KKV V  G C GF  NR    Y ++A  ++  G     +D+
Sbjct: 449 ADKTAPDAVATGFALAKKLKKVAVRAGVCDGFIGNRILSFYKKAADYMMMDGASPEEVDT 508

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+ +FG  +GP+Q+ DLAG  ++ AT+K      P     SP++D + + G  G+  G+G
Sbjct: 509 AMTNFGFAMGPYQVYDLAGLDISWATNKRRAATRPAEERYSPILDRICEEGWFGRKTGRG 568

Query: 420 LYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y E G++P PD   L II+E R  + I     P   T +EIV   +  +++E+ RVL
Sbjct: 569 FYIYDETGARPNPD--ALKIIDEERAKAGIT----PRKFTAEEIVSRFMTAMISEAIRVL 622

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           E+GI +R  D+D   + G  FP +RGG +  AD +GA  +   ++ +++    +++    
Sbjct: 623 EDGIALRPIDIDAVYLFGYGFPRFRGGPMHTADQIGAAELVKRIEAFAEEDSYYWQVPAL 682

Query: 539 LEERATKG 546
           L + A  G
Sbjct: 683 LRQMAETG 690


>gi|421745980|ref|ZP_16183806.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
 gi|409775497|gb|EKN56977.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator HPC(L)]
          Length = 693

 Score =  298 bits (762), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 191/550 (34%), Positives = 290/550 (52%), Gaps = 17/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW--IRSLHRTDKLGS 58
           M++    + SE+     L D +V  + +L  +  +A ++ A   P   +R L    +   
Sbjct: 152 MIVTGNPVLSEKFAGTKLFDEIVDGD-VLPAAIAFARNVGAASGPHPKVRDLKVRHE--- 207

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
              A   L  A+      A N P    C++ +   +      G+  E + F  LV    S
Sbjct: 208 --NAEGFLAFAKNTVAAVAKNFPAPGKCVEAVAASL-KPFDEGLRLEREGFMFLVNTPES 264

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           R L H FF +RA SK+P+V       R + KVAVIG G MG GI+   +   I V + E 
Sbjct: 265 RALRHAFFGERAASKIPDVPS-DTPTRKIEKVAVIGAGTMGGGISMNFLNAGIPVTVLET 323

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E L +G+ TI  N      +GKLTQ+K    + +L   L Y + KD D++IEAV E +
Sbjct: 324 KQEALDRGVATIRRNYENSAKKGKLTQEKVEQRMGLLSTTLSYDDIKDADLIIEAVFEEM 383

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ +F +L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+V
Sbjct: 384 GVKETVFKKLDEVAKPGAILASNTSTLDVNKIASFTRRPQDVVGMHFFSPANVMKLLEVV 443

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R ++T   V+  +M V K IKK  VV G C GF  NR    YS+ A  L+  G    ++D
Sbjct: 444 RGDKTGKDVLATVMQVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVD 503

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            AI  FG  +GPF++ DLAG  +  A  K      PD  + S   DLL + GR G+  G 
Sbjct: 504 KAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVEKPDIQY-SKTADLLCEMGRFGQKTGA 562

Query: 419 GLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y Y+ G  KP P+  V  +I +  +   I        ++++EIVE +++ +VNE  ++
Sbjct: 563 GWYDYKPGDRKPYPNQQVNEMIVQHSKDLGIT----RRKISDEEIVERLVYALVNEGAKI 618

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPS 536
           LEEGI  +ASD+D   + G  FP +RGG + +AD VG   V  S++++++ Y G  ++P+
Sbjct: 619 LEEGIASKASDIDMVYLTGYGFPLHRGGPMLYADQVGLYNVLLSMQRYAKGYHGEAWEPA 678

Query: 537 RFLEERATKG 546
             L++ A +G
Sbjct: 679 PLLKKLAAEG 688


>gi|374333398|ref|YP_005083582.1| fatty oxidation complex subunit alpha [Pseudovibrio sp. FO-BEG1]
 gi|359346186|gb|AEV39560.1| fatty oxidation complex, alpha subunit [Pseudovibrio sp. FO-BEG1]
          Length = 717

 Score =  298 bits (762), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 164/463 (35%), Positives = 257/463 (55%), Gaps = 8/463 (1%)

Query: 86  CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 145
           C++ IE         G+ KE ++F EL      R L H FFA RA  K+P +   G+ PR
Sbjct: 239 CVEAIEVASQTSFVDGMAKEREMFMELKNSAQHRALSHAFFADRALGKLPEIE--GIAPR 296

Query: 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 205
            ++ + VIGGG MG+GIAT  ++N + V L E + + L +   TI  NV G V +GKL+ 
Sbjct: 297 MLKSIGVIGGGTMGAGIATGALMNGLSVTLIERDDDALGRAKATIAKNVGGAVKKGKLSA 356

Query: 206 DKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264
           D+      + L    DY+   ++D+V+EAV E + +K+++F +L++ C    +LATNTS 
Sbjct: 357 DQEQRIFAEALSLSTDYASLSELDLVVEAVFEDIDVKKQVFEKLDEVCKEGAVLATNTSY 416

Query: 265 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 324
           +D+N +   T     +IG HFFSPAH+M LLE+V  ++T+  VI     +GKI++KV V 
Sbjct: 417 LDVNAIAAVTKRPQDVIGLHFFSPAHIMKLLEVVVADKTAPDVIATGFLLGKIMRKVAVR 476

Query: 325 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 384
            G C GF  NR    Y  +A  +V  G   F +D  +  FG P+GP+ + DLAG  +  A
Sbjct: 477 AGVCDGFIGNRILATYRAAADAIVVDGSTPFEVDEVMLEFGFPMGPYAVADLAGLDIGWA 536

Query: 385 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECR 443
           T K        R       D + + G  G+   KG Y YE G+ K  P+P+VL I+ E R
Sbjct: 537 TRKHKAPTRDPRERYFTFADRMCEQGWFGQKTSKGYYVYEDGARKGTPNPAVLDILTEER 596

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
           +   I        +T+ +I++  +  +VNE+ +V+E+GI +R  D+D   + G  FP +R
Sbjct: 597 KEKRI----NAKKLTKTQILDRYMAAMVNEAAKVVEDGIALRPLDVDMTLIYGYGFPRWR 652

Query: 504 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           GG + +AD +G   + +++K +++    F++P++ LEE    G
Sbjct: 653 GGPMQYADEIGLEKILSNIKAYAEEDAYFWQPAKLLEELVASG 695


>gi|323526029|ref|YP_004228182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1001]
 gi|323383031|gb|ADX55122.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
           [Burkholderia sp. CCGE1001]
          Length = 694

 Score =  298 bits (762), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 180/528 (34%), Positives = 280/528 (53%), Gaps = 13/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + S++    GL D +V  + L + +  +A  + A+  P  +   R        
Sbjct: 152 MIVSGAPVDSQKLASSGLFDELVEGD-LAEAALAFARKVGAQAGPHPKVRERKI---DHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A + P    C+D +E G+ HG   G+  E + F  LV    SR 
Sbjct: 208 NAEGFIQFARNSVAAVAKHFPAPLKCIDAVEAGVKHGFDKGLAFERECFVALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   I V L E+ 
Sbjct: 268 LRHAFFGERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFVNAGIPVTLLEMK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKL  +     + ++   L Y + KD D+++EAV E + 
Sbjct: 326 QEVLQRGLATIRGNYEASVKKGKLKAEALEARMALITPTLSYDDLKDADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEIAKPGAILASNTSTLDVNRIAAFTKRAQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GKETAKDVLATVMKLAKQIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L ++GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDLHY-SKIADRLCETGRFGQKTGGG 564

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y  G +  +P   V  +I    +  N     +   + + EIVE ++F +VNE  ++L
Sbjct: 565 WYDYAAGERTARPSTLVDDMIVAYSKEVN----AERRKIGDDEIVERLVFALVNEGAKIL 620

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           EEGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 621 EEGIASKASDIDMVYLTGYGFPLHRGGPMLYADTVGLYNVERAIRRYA 668


>gi|407939373|ref|YP_006855014.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
 gi|407897167|gb|AFU46376.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
          Length = 699

 Score =  297 bits (761), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 180/510 (35%), Positives = 271/510 (53%), Gaps = 15/510 (2%)

Query: 41  ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS 100
           AR  P +R+L          E     + AR   K  A N P    C+D +E         
Sbjct: 197 ARPLPLVRNLPCKH-----PEGDAYFQFARNMVKGMAKNFPAPAKCVDAVEAATKKKFAE 251

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+L E ++F  L+    SR L H+F A+RA SK+P+V     K R ++ V VIG G MG 
Sbjct: 252 GMLVEREIFINLMWTPESRALRHLFMAERAASKIPDVASDTPK-RDIKLVGVIGAGTMGG 310

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI+   +   I V + E+  E L +G+ TI+ N    V +GKL QDK    + +L   L 
Sbjct: 311 GISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKQDKYEQRMALLSTTLS 370

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y + KD D++IEAV E + +K+ +F +L+    P  ILA+NTST+D++ +   T     +
Sbjct: 371 YDDLKDCDLIIEAVFEEMGVKEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDV 430

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G HFFSPA+VM LLE+VR + T+  V+  +M +GK IKK  VV G C GF  NR    Y
Sbjct: 431 VGMHFFSPANVMKLLEVVRGKETAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQY 490

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
           S+ A  L+  G    ++D AI  FG  +GPF++ DLAG  +  A  K       D  + S
Sbjct: 491 SRQAGFLLDEGCTPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-S 549

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTE 459
              D L + GR G+  G G Y Y+ G +   P   V  +IE+ R+   I P      +++
Sbjct: 550 RTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSDLVNKMIEDHRKELGITPR----KISD 605

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EIV+ ++F +VNE   +LE+GI  ++ D+D   + G  FP +RGG + +A  VG   V 
Sbjct: 606 EEIVQRLVFALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIHRGGPMHYASEVGLFNVV 665

Query: 520 TSLKKWSQL---YGNFFKPSRFLEERATKG 546
            ++ ++++       F+KP+  L + A +G
Sbjct: 666 QAMDRFAKNPLDDAAFWKPAPLLAKLAAEG 695


>gi|326318994|ref|YP_004236666.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375830|gb|ADX48099.1| 3-hydroxybutyryl-CoA epimerase [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 710

 Score =  297 bits (761), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 281/547 (51%), Gaps = 9/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K ++++     GL+D +V   + +        ++ + + P +R           +
Sbjct: 158 MMLSGKPLSAKAALAAGLVDRLVDGSDPVAAGLACVQELQSAQAP-LRRTRDVAIADKAA 216

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+  LA   AKK+   +   Q  ++ +   +      G+ +E   F E +      G
Sbjct: 217 AMAELDALAADTAKKSR-GLFSPQKIVECVRNAVELDFDEGMQRERAAFMECLASPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R  +KVP        PR +  +A+IGGG MG+GI  + +   + V + E + 
Sbjct: 276 LIHAFFAEREVAKVPEAK--AAAPRPITSIAIIGGGTMGAGITVSALDAGLPVTMIERDD 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T D     +    G   Y +    D+VIEAV E + +
Sbjct: 334 ASLARGRAHVEKVYDGLVAKGRMTADAKAAVMARYTGSTRYEDIAAADLVIEAVFEDLEV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F EL++ C P  +LATNTS +D++ +   T     +IG HFFSPA++M LLEIV  
Sbjct: 394 KKAVFRELDRVCKPGAVLATNTSYLDIDAIAAATQRPQDVIGLHFFSPANIMKLLEIVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID+A
Sbjct: 454 AKVSADVVATAFALARTMKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEIDAA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ+ DLAG  +  AT K         +    + D + + G  G+  G+G 
Sbjct: 514 VRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPNARYVEIADRICERGWFGQKTGRGF 573

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G++  +PDP VL I++  R    ++    P S T  EI+   +  +VNE  +V+E
Sbjct: 574 YLYPEGARTGQPDPEVLAIVDAERAKKGVV----PRSFTPHEIMRRYMAAMVNEGAKVVE 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI +R  D+D   + G  FP +RGG + +AD VG   +   +++++Q    F+KP+  L
Sbjct: 630 EGIALRPLDVDVTFLSGYGFPRFRGGPMHYADTVGLPKILADIREFAQEDPLFWKPAPLL 689

Query: 540 EERATKG 546
           E+   +G
Sbjct: 690 EKLVAEG 696


>gi|220925287|ref|YP_002500589.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
           nodulans ORS 2060]
 gi|219949894|gb|ACL60286.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
           nodulans ORS 2060]
          Length = 692

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 178/540 (32%), Positives = 277/540 (51%), Gaps = 16/540 (2%)

Query: 8   ITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 67
           I +++   +GL+D +   + L   +  +A  + A  +P  R   R D+L    +   +  
Sbjct: 162 IGAKQAAAMGLVDEIAPEDSLRAHAVAFAERVVAEGRPLTRIRDREDRLAEGRDDPGLFD 221

Query: 68  LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 127
             R +  +        +AC+  ++         G+  E + F +LV    S    +VFFA
Sbjct: 222 AFRRENARRLRGFEAPEACIACVQAACTLPFDQGLAFEREQFLKLVSGSQSAAQRYVFFA 281

Query: 128 QRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186
           +R T+++P+V  D   +P  + KV VIG G MG GI+   +   I V + E   E L +G
Sbjct: 282 ERQTARIPDVPEDTPTRP--IAKVGVIGAGTMGGGISMNFLNAGIPVTIVETKREALDRG 339

Query: 187 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 246
           +  I +N      +G+L  +     + +L   L+    K  D++IEAV E + +K+ IFS
Sbjct: 340 LGIIRSNYETTARKGRLRPEDVETRMGLLTDTLELEALKGCDLIIEAVFEDMGIKKDIFS 399

Query: 247 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 306
            L++   P  ILA+NTS +D++ +   TS    +IG HFFSPA+VM LLE+VR  RT   
Sbjct: 400 RLDRIAKPGAILASNTSYLDIDEIASVTSRPGDVIGMHFFSPANVMRLLEVVRGARTERD 459

Query: 307 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 366
           VI   M +G+ I K+PV+VG C GF  NR      + A  L+  GV  + +D  I  FGL
Sbjct: 460 VIATAMQIGRTIGKIPVLVGVCHGFVGNRMLAERQREANRLILEGVKPWDVDRVIYEFGL 519

Query: 367 PIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKG 426
           P+GPF + DLAG  +    S+E +K+   R       DLL +  R G+  G G Y Y+  
Sbjct: 520 PMGPFAMSDLAGLDI--GWSRETNKSESVR-------DLLCERDRRGQKTGAGFYDYDAK 570

Query: 427 SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRA 486
               P      II        +    +  + +++EI+E  L+P+VNE  ++L+EG  +RA
Sbjct: 571 RNAMPSAVTEEIIATVAERQGV----RRKAASDQEILERCLYPMVNEGAKILDEGKAIRA 626

Query: 487 SDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           SD+D   + G  +P YRGG ++WAD++G   V   L+ +   YG+ FKPS  LE  A +G
Sbjct: 627 SDIDIVWINGYGWPVYRGGPMYWADSIGLPKVLERLRAYEAEYGDAFKPSPLLERLAAEG 686


>gi|148258278|ref|YP_001242863.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146410451|gb|ABQ38957.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 697

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 181/549 (32%), Positives = 298/549 (54%), Gaps = 18/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSL 59
           M++    I + E  K GLI+ +V  E     +  +A  + A  +P +R L   D KL + 
Sbjct: 152 MIVGGDPIGAAEAHKAGLIEEIV--EGPASGAEAFARKVVAENRP-LRKLRDDDSKLAAA 208

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              R +   A     K +  +    A  D +   I      G+ +E + F +L+  D S+
Sbjct: 209 KADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSK 268

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              + FFA+R  +K+  V + G K R V +VA+IG G MG GIA +     I V L E  
Sbjct: 269 AQRYAFFAEREAAKIAGVPE-GTKGRKVDRVAIIGAGTMGGGIAMSFANAGIPVTLIETA 327

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  ++ N      RG +  D     + ++ G +     KD D+VIEAV E++ 
Sbjct: 328 EEQLKRGMGVMQKNWEATAARGGIPADAPAKRMALIDGKVGLEHVKDADLVIEAVFETMA 387

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  +LA+NTS ++++ +  +TS    ++G HFFSPA+VM L EIVR
Sbjct: 388 VKKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVR 447

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+T+   ++  +++ + I KVP VVG C GF  NR      + A  L+  G    ++D+
Sbjct: 448 AEKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDA 507

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG
Sbjct: 508 VVTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKG 560

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE GS+ P PDP V  +I+E   L+ +  G K  +V+++EI+E +++P++NE  ++L
Sbjct: 561 YYKYEAGSRAPLPDPDVEKLIDET--LAKL--GLKRRAVSDEEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
            EGI  R SD+D   + G  +P YRGG ++WAD+VG  ++   L  +++   +   +P+ 
Sbjct: 617 AEGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKHIAERLAFYAKETNDPSLEPAP 676

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 677 LLKKLADEG 685


>gi|260431228|ref|ZP_05785199.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415056|gb|EEX08315.1| peroxisomal bifunctional enzyme [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 698

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 189/551 (34%), Positives = 284/551 (51%), Gaps = 19/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSE--ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           M+   + + ++E  KLG+ID V   +  E+        LD  A R+  +  +   D +  
Sbjct: 151 MITTGRHVRADEALKLGVIDKVQDGDPREIGLAYAQELLDTGAPRRA-VGEMPAPDPVDF 209

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            +    VLK  R Q            AC              G+ +E ++F +L+  D  
Sbjct: 210 DAVYEAVLKKGRGQLSPAVAVRAVQAACE-------APSFAEGMARERELFMQLMESDQR 262

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           +GL+H FFA+RA  K+P +   G++PR V ++ VIGGG MG+GIATA +L  + V L E+
Sbjct: 263 KGLIHAFFAERAVGKLPELK--GVEPRPVHQIGVIGGGTMGAGIATAALLAGLPVTLLEM 320

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIES 237
             E        I  N+ G + RGK++Q + +  L   L+    Y     VD+VIEAV E 
Sbjct: 321 TQEAAHAAKDRIAGNLAGALKRGKISQQQHDAILSDQLQLATGYDALSAVDLVIEAVFED 380

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+++F++L+  C P  +LATNTS +D+N +   T+    +IG HFFSPAHVM LLEI
Sbjct: 381 MDVKKQVFAQLDAVCKPGAVLATNTSYLDVNEIAAATTRPQDVIGLHFFSPAHVMKLLEI 440

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           V  ++T+ +V+     +G  +KKV V  G C GF  NR    Y   A  +V  G   F+I
Sbjct: 441 VVADKTAPEVVATGFALGHRLKKVSVRAGVCDGFIGNRILSTYRTCADHMVLDGASPFQI 500

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSK-EFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           D A+  FG  +GPF + DLAG  +  A  K +  +    R+  S   D L ++G  G+  
Sbjct: 501 DKALTDFGFAMGPFAVSDLAGLDIGWAVRKRKRAEGLDPRARDSSYADKLCEAGHFGQKT 560

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G+G Y YEKG +   P+  VL +I   R    I     P + T+ EIV   +  +VNE+ 
Sbjct: 561 GQGSYVYEKGKRGGTPNSEVLDLIAADRAAQGIT----PRTFTDDEIVRRYMVSMVNEAA 616

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           +V+ EGI  R  D+D   + G  FP YRGG + WAD  G   +   ++ WS     F++P
Sbjct: 617 KVVGEGIARRPLDVDVVLLYGYGFPRYRGGPLKWADLQGLPGILDDIRAWSAEDDYFWQP 676

Query: 536 SRFLEERATKG 546
           +  LE+   +G
Sbjct: 677 APLLEKLVAEG 687


>gi|160896840|ref|YP_001562422.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
           SPH-1]
 gi|160362424|gb|ABX34037.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
           SPH-1]
          Length = 705

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 181/552 (32%), Positives = 290/552 (52%), Gaps = 19/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-----TSEELLKVSRLWALDIAARRKPWIRSLHRTDK 55
           +ML  K ++++     GL+D +V     T+  L   + L A + A RR    R +   DK
Sbjct: 157 LMLSGKHLSAKAALAAGLVDKLVDGTDATAAGLAYTNELLATNTAPRR---TRDIEIADK 213

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
               +   E+  LA   AKK+   +      ++ +   +      G+ KE  +F E +  
Sbjct: 214 A---AALAELDALAADTAKKSR-GLFSPLKIVECVRAAVELPFDEGIAKERALFVECLNS 269

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
               GL+H FFA+R T+K+P        PR   K+AVIGGG MG+GI  + +   + V +
Sbjct: 270 PQRAGLIHAFFAERETAKIPEAK--AAAPRHFAKIAVIGGGTMGAGITVSALDAGLTVTM 327

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E +++ + +G   +E    GL+ +G++T++     +        Y + KDVD+VIEAV 
Sbjct: 328 IERDADSIARGQANVEKVYNGLIAKGRMTEEAKAAVMARYTPSTSYDDIKDVDLVIEAVF 387

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +K+ +F EL++ C P  +LATNTS +D++ +   TS    +IG HFFSPA++M LL
Sbjct: 388 EDLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLL 447

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EIV   + +  V+     + K +KKVPV  G C GF  NR    Y Q+A  ++  G   +
Sbjct: 448 EIVVPAKVAPDVVTTAFELAKRMKKVPVRAGVCDGFIGNRILAVYKQAADYIMEDGASPY 507

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
            ID A+R FG P+GPFQ+ DLAG  +  AT K        ++    + D + + G  G+ 
Sbjct: 508 EIDEAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEVADRVCERGWFGQK 567

Query: 416 NGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            G+G Y Y  G++  +PDP VL I++  R    + P       T +EI+   +  +VNE 
Sbjct: 568 TGRGFYLYPHGARVGQPDPEVLAIVDAERAKKGVTPR----KFTPEEIMRRYMAAMVNEG 623

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            +V+EEGI +R  D+D   + G  FP +RGG + WAD  G + V   ++++++    F+K
Sbjct: 624 AKVVEEGIALRPLDVDVTFLSGYGFPRFRGGPMKWADMQGLDKVLADIREFAKEDALFWK 683

Query: 535 PSRFLEERATKG 546
           P+  LE+   +G
Sbjct: 684 PAPLLEKLVAEG 695


>gi|365091125|ref|ZP_09328632.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
 gi|363416243|gb|EHL23363.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax sp. NO-1]
          Length = 699

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/490 (35%), Positives = 264/490 (53%), Gaps = 10/490 (2%)

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E     + AR   K  A N P    C+D +E         G+L E ++F  L+    SR 
Sbjct: 212 EGDAYFQFARNMVKGMAKNFPAPAKCVDAVEAATKKKFAEGMLVEREIFINLMWTPESRA 271

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+F A+RA SK+P+V     K R ++ V VIG G MG GI+   +   I V + E+  
Sbjct: 272 LRHLFMAERAASKIPDVASDTPK-RDIKLVGVIGAGTMGGGISMNFLNAGIPVKILEMKQ 330

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI+ N    V +GKL QDK    + +L   L Y + KD D++IEAV E + +
Sbjct: 331 EALDRGVATIKKNYEAQVKKGKLKQDKYEQRMALLSTTLSYDDLKDCDLIIEAVFEEMGV 390

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F +L+    P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 391 KEAVFKQLDAVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRG 450

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M +GK IKK  VV G C GF  NR    YS+ A  L+  G    ++D A
Sbjct: 451 KETAKDVLATVMAIGKKIKKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGCTPQQVDKA 510

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K       D  + S   D L + GR G+  G G 
Sbjct: 511 IEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKTGAGW 569

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y+ G +   P   V  +IE+ R+   I P      ++++EIV+ ++F +VNE   +LE
Sbjct: 570 YDYQAGKRDAIPSDLVNKMIEDHRKELGITPR----KISDEEIVQRLVFALVNEGAHILE 625

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPS 536
           +GI  ++ D+D   + G  FP +RGG + +A  VG   V  ++ ++++       F+KP+
Sbjct: 626 DGIASKSGDIDMVYLTGYGFPIHRGGPMHYASEVGLFNVVQAMDRFAKNPLDDAAFWKPA 685

Query: 537 RFLEERATKG 546
             L + A +G
Sbjct: 686 PLLAKLAAEG 695


>gi|385208794|ref|ZP_10035662.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
 gi|385181132|gb|EIF30408.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. Ch1-1]
          Length = 706

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 178/547 (32%), Positives = 283/547 (51%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  +  +S+E   LGLID + +S+++L     +  ++ A   P +R       LG  +
Sbjct: 157 LILSGRHASSKEALALGLIDRLGSSDDILAEGLAYVHELLAAHAP-VRRTREAAALGDRA 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +   +  AR +  K +  +      +D +E  I      G+  E K+F E +      G
Sbjct: 216 ASLAAVTAARAETAKKSRGLFSPLKIIDAVEAAIEQPFDEGLRLERKLFLECLDSPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R   K P   D   KPR +  + V+GGG MG+GIA A +   + V + E + 
Sbjct: 276 LIHAFFAEREVLKAPETRDA--KPRALNAIGVVGGGTMGAGIAVAALDAGLPVTMIERDD 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G+  IE    GL+ +G+++ DK    +    G   Y    D D+VIEAV E + +
Sbjct: 334 ASLARGLAHIEKVYDGLIAKGRMSADKKAAVMARWNGSTSYDALADADLVIEAVFEDLAV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL++ C    +LATNTS +D++ +    S    +IG HFFSPA++M LLE+V  
Sbjct: 394 KQAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPANIMKLLEVVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++ SA V+       K ++K PV  G C GF  NR    Y  +A  ++  G   ++ID+A
Sbjct: 454 KQVSADVVATAFEFAKNLRKTPVRAGVCDGFIGNRVLAVYRAAADAMMEDGASPYQIDAA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R+FG P+GPFQ++DLAG  +  A  K         +    + D L + G  G+  G+G 
Sbjct: 514 VRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTGRGF 573

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +GS+   PDP V  II+  R  + I P     S T+ EI+   +  ++NE   V+ 
Sbjct: 574 YLYPEGSRSGTPDPEVEAIIDAERARAGITPR----SFTDDEIIRRYMAAMINEGANVVH 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   +   ++++++    F+K S  L
Sbjct: 630 ERIALRPLDVDVTFLYGYGFPRYRGGPMKYADMVGLPKILADIREFAKEDPLFWKASPLL 689

Query: 540 EERATKG 546
            E   +G
Sbjct: 690 VELVERG 696


>gi|73537708|ref|YP_298075.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121045|gb|AAZ63231.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 704

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 178/549 (32%), Positives = 289/549 (52%), Gaps = 13/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K ++++     GL+D +   ++ +     +  ++  +  P    L RT  L    
Sbjct: 155 LMLSGKHLSAKAAQAAGLVDRLAEGDDPVAAGLAYVNELLEQGAP----LRRTRDLAIAD 210

Query: 61  EAREVLKLARLQAK--KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           +A  + +L  LQA+  K    +   Q  ++ +   +      G+ KE  +F E +     
Sbjct: 211 KAAALAELDTLQAETAKKTRGLFSPQKIVECVRAAVELPFDEGLAKERALFVECLNSPQR 270

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            GLVH FFA+R T+KVP     G  PR + ++AVIGGG MG+GI  A +   + VV+ E 
Sbjct: 271 AGLVHAFFAERETAKVPEAQ--GAAPRALNRIAVIGGGTMGAGITVAALDTGLPVVMIER 328

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           ++E + +G   +E    GL+ +G++T +     +        Y    DVD+VIEAV E +
Sbjct: 329 DAESIARGQANVEKVYDGLIAKGRMTPEGKAAIMARYTPSTSYESIADVDLVIEAVFEDI 388

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ +F +L++ C P  +LATNTS +D++ +    S    +IG HFFSPA++M LLEIV
Sbjct: 389 EVKKAVFQQLDRVCKPGAVLATNTSYLDIDAIAGSISRPQDVIGLHFFSPANIMKLLEIV 448

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
              + S  V++    + K +KK+PV  G C GF  NR    Y Q+A  ++  G   + ID
Sbjct: 449 VPAKVSPDVVVTAFELAKRMKKIPVRAGVCDGFIGNRILAVYKQAADYIMEDGASPYEID 508

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+R FG P+GPFQ+ DLAG  +  AT K        ++    + D + + G  G+  G+
Sbjct: 509 EAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEVADRICERGWFGQKTGR 568

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y Y +G++  +PD  VL I+E  R+   I     P   T +EI+   +  +VNE  +V
Sbjct: 569 GFYLYPQGARIGQPDREVLAIVEAERQKKGI----APRKFTAEEIMRRYMAAMVNEGAKV 624

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           +EEGI +R  D+D   + G  FP +RGG + +AD VG   +   ++ +++    F+KP+ 
Sbjct: 625 VEEGIALRPLDVDVTFLSGYGFPRFRGGPMKYADMVGLPKILEDIRTFAKEDPLFWKPAP 684

Query: 538 FLEERATKG 546
            LE+   +G
Sbjct: 685 LLEKLVAEG 693


>gi|414176191|ref|ZP_11430420.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
 gi|410886344|gb|EKS34156.1| hypothetical protein HMPREF9695_04066 [Afipia broomeae ATCC 49717]
          Length = 696

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/549 (33%), Positives = 289/549 (52%), Gaps = 17/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSL 59
           M++    I + +  K GLID VV  E  +     +A  + A ++P +R L   D KL + 
Sbjct: 152 MIVGGDPIGAADALKNGLIDEVVEGEPAVG-GEAFARKVLAEKRP-LRKLRDDDSKLAAA 209

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              + +   A   A K    +    A  + +   +       +  E  +F +L+  D S+
Sbjct: 210 KADKSIFTNAAAAANKRNRGLEAPLAAAEAVSHSLDQPFDQALKSERDLFIKLMNGDQSK 269

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              + FFA+R  +KV  V + G KPR V++VA+IG G MG GIA +     I V L E  
Sbjct: 270 AQRYAFFAEREAAKVSGVPE-GTKPRDVKQVAIIGAGTMGGGIAMSFANAGIPVTLIETG 328

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  ++ N      RG +  D     + ++KGV+     KD D++IEAV E++ 
Sbjct: 329 GEQLKRGLGVMQKNYEATAARGGIPADAPAKRMGLIKGVVGIENVKDADLIIEAVFETMA 388

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F +L++   P  +LATNTS +D+N +   T     ++G HFFSPA+VM L EIVR
Sbjct: 389 IKKDVFGKLDQFAKPGAVLATNTSYLDINQIAAMTKRPQDVLGMHFFSPANVMKLCEIVR 448

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+T+   ++  + V K I KVPVVVG C GF  NR      + A   +  G    ++D+
Sbjct: 449 GEKTAPDALMTAVAVAKRIAKVPVVVGVCDGFVGNRMLAARGKQAEKFLFEGALPQQVDA 508

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG+P+GPF + DLAG  +   + +       DR  +S + D + ++GR G+  GKG
Sbjct: 509 VLTKFGMPMGPFAMGDLAGLDIGWRSRQ-------DRGIKSEIADAICEAGRFGQKTGKG 561

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE GS+ P PDP +  +IEE    +    G K   + ++EI+E +++P++NE  R+L
Sbjct: 562 YYKYEAGSRSPLPDPEIEKLIEE----TTAKLGLKRRQIDDQEILERLMYPMINEGARIL 617

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS-QLYGNFFKPSR 537
           EE I  R SD+D   + G  +P YRGG +F+AD VG   +   L  ++ Q      +P+ 
Sbjct: 618 EEKIAARPSDIDVVWLYGYGWPIYRGGPMFYADQVGLKTIAERLSFYAKQTNDPSLEPTP 677

Query: 538 FLEERATKG 546
            L+  A +G
Sbjct: 678 LLKRLADEG 686


>gi|307944786|ref|ZP_07660124.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307772000|gb|EFO31223.1| noyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 771

 Score =  296 bits (757), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 183/550 (33%), Positives = 287/550 (52%), Gaps = 22/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++     I +E   ++GLID +   +      R  A+  A +         RT +L +++
Sbjct: 232 LITTGNRIEAEASHEIGLIDVIADGD-----PRDLAIKFAEQVLSGELETRRTGEL-TVT 285

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E  + +       K+  PN+     C++ +   I+     G+ KE  +F E +      G
Sbjct: 286 EDPDAIATVAETLKRKQPNLFSPHKCVEAVAASILPLS-EGLQKERSLFFECMESPQRAG 344

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+RA SK+P   +    PR +  + VIGGG MGSGIATA +L    V+L E + 
Sbjct: 345 LIHAFFAERAVSKIPEAKE---TPRTIENIGVIGGGTMGSGIATACLLAGFQVILAERDE 401

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIESVP 239
             + +G+  I  N+ G V RGK+T D+ +  L   L    DY+ F D D+VIEAV E + 
Sbjct: 402 AGVERGVSIISGNLDGAVKRGKVTADQRDTILSNALSTTTDYAAFSDADLVIEAVFEDMD 461

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F +L+  C    +LATNTS +D+N +   TS  + +IG HFFSPAHVM LLE+V 
Sbjct: 462 VKKSVFKQLDAICKDGAVLATNTSYLDVNEIAASTSRPEDVIGLHFFSPAHVMKLLEVVV 521

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            ++T+  V+     +GK ++K+ V  G C GF  NR    Y ++A  L+  G     +D 
Sbjct: 522 ADKTAPDVVATGFALGKRLRKIAVRAGVCDGFIGNRILNTYKKAADYLMMDGASPEEVDR 581

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV---DLLLKSGRNGKAN 416
           A+ ++G  +GPF + DL+G  +  A  K   +  P R+ Q   V   D L +    G+  
Sbjct: 582 AMVNYGFAMGPFTVGDLSGQDIGWAARK---RQAPMRAQQERYVAIPDRLCEQEMFGRKT 638

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG Y Y +GS P  +P  + IIE+ R  + I P     + +E EI   I+  ++ E+  
Sbjct: 639 GKGYYVYGEGS-PTLNPEAVAIIEDERAKAGITPR----NFSEDEITARIMTAIIKEAIS 693

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           +LE+GI +R  D+D   + G  FP +RGG +  ADA+GA  +   ++ + Q    F++  
Sbjct: 694 ILEDGIALRPIDIDAVYLFGYGFPRFRGGPMHTADAIGAAELVKRIETYVQEDAFFWRVP 753

Query: 537 RFLEERATKG 546
             L E A +G
Sbjct: 754 NLLAETAQRG 763


>gi|241763979|ref|ZP_04762020.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
           2AN]
 gi|241366730|gb|EER61182.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Acidovorax delafieldii
           2AN]
          Length = 705

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 285/547 (52%), Gaps = 9/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K + ++   + GL+D +V S   +     +A ++ A++ P  R+  R   + + S
Sbjct: 157 LMLSGKHLGAKAALQAGLVDRLVESGTPVAAGLAYANELLAQKAPVRRT--RDIAIANPS 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L+  R    K    +      ++ ++  +      G+ +E  +F E +      G
Sbjct: 215 GALADLEALRADTAKKTRGLFSPLKIIECVQAAVQLTFDEGLARERALFLECLDSPQRAG 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R T+K+P       +PR  + +A+IGGG MG+GI  + +     V + E ++
Sbjct: 275 LIHAFFAERETAKIPEAQ--AAQPRAFKTLAIIGGGTMGAGITVSALDAGFTVTMIERDA 332

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E + +G K +E    GL+ +G++T++     +        Y E  DVD+VIEAV E + +
Sbjct: 333 ESIARGQKNVEKVYDGLIAKGRMTEEGKAATMARYTPSTSYDEIADVDLVIEAVFEDLEV 392

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F EL++ C    +LATNTS +D++ +   TS    +IG HFFSPA++M LLEIV  
Sbjct: 393 KKAVFKELDRVCKKGAVLATNTSYLDIDAIAAATSRPQDVIGLHFFSPANIMKLLEIVVP 452

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID A
Sbjct: 453 AKVSADVVATAFELAKKLKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEIDEA 512

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG  +GPFQ+ DLAG  +  AT K        ++    + D + + G  G+  G+G 
Sbjct: 513 VRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEVADRICERGWFGQKTGRGF 572

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G++  +PDP VL I++  R    +     P   T +EI+   +  +VNE  +V+E
Sbjct: 573 YLYPQGARVGQPDPEVLAIVDAERAKKGVT----PRQFTPEEIMRRYMAAMVNEGAKVVE 628

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI +R  D+D   + G  FP +RGG + WAD  G   V   ++ + +    F+KP+  L
Sbjct: 629 EGIALRPLDVDVTFLSGYGFPRFRGGPMKWADMQGLPQVLADIQAFEKEDLLFWKPAPLL 688

Query: 540 EERATKG 546
            +   +G
Sbjct: 689 VKLVAEG 695


>gi|295676535|ref|YP_003605059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1002]
 gi|295436378|gb|ADG15548.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1002]
          Length = 696

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 170/463 (36%), Positives = 254/463 (54%), Gaps = 9/463 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           ++ AR      A N P    C+D +E G+  G   G+  E + F  LV    S  L H F
Sbjct: 215 IQFARNSVAAIAKNFPAPHKCIDAVEAGVKDGFDKGLAFERECFIALVQTPESHALRHAF 274

Query: 126 FAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           F +RA SK+P+V +D  +  R + +VAVIG G MG GIA   +   I V L E   E L 
Sbjct: 275 FGERAASKIPDVPSDTSV--RDINQVAVIGAGTMGGGIAMNFLNAGIPVTLLETKQEALD 332

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           +G+ TI  N    VT+GKL  +     L +L   L Y + K  DM+IEAV E + +K+++
Sbjct: 333 RGVATIRKNYEATVTKGKLKPEVMEQRLALLSPTLSYDDLKHADMIIEAVFEELGVKEQV 392

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+
Sbjct: 393 FGRLDEVAKPGAILASNTSTLDVDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETA 452

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
             V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D AI  F
Sbjct: 453 KDVLATVMKLAKKIRKTAVVSGVCDGFIGNRMIEQYLRQALFMLEEGALPAQVDKAIEKF 512

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 424
           G  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G Y Y+
Sbjct: 513 GFAMGPFRMSDLAGNDIGWAIRKRRYVEHPDMHY-SKIADRLCEMGRFGQKTGGGWYDYK 571

Query: 425 KGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIV 483
            G +   P  +V  +I E  + ++     +   +++ EIVE ++F +VNE  ++LEEGI 
Sbjct: 572 AGDRTAYPSGAVNEMIVEYSKETH----SERRKISDDEIVERLVFALVNEGAKILEEGIA 627

Query: 484 VRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
            +ASD+D   + G  FP YRGG + +AD VG   V  ++++++
Sbjct: 628 SKASDIDMVYLTGYGFPLYRGGPMLYADTVGLYNVERAIRRYA 670


>gi|239815901|ref|YP_002944811.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
           S110]
 gi|239802478|gb|ACS19545.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
           S110]
          Length = 701

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 170/476 (35%), Positives = 264/476 (55%), Gaps = 10/476 (2%)

Query: 79  NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 138
           N P    C+D ++         G+ +E ++F  L+    S  L H+F A+RA SK+P+V 
Sbjct: 232 NYPAPLKCVDAVQAATKMKFDEGMAEERRIFTALMFTPESLALRHLFMAERAASKIPDVP 291

Query: 139 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 198
           +   K R V+ V VIG G MG GI+   +   I V + E+  E L +GI TI+ N    V
Sbjct: 292 EDTPK-REVKSVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGIATIKKNYESQV 350

Query: 199 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 258
            +GKL QDK    + +L   LDY++ KD D++IEAV E + +K+K+F EL++      IL
Sbjct: 351 KKGKLKQDKYEQRMALLSTTLDYNDLKDADLIIEAVFEELGVKEKVFKELDRVAKKGAIL 410

Query: 259 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 318
           A+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + TS  V+  +M +GK I
Sbjct: 411 ASNTSTLDVDKIAAFTQRPQDVVGMHFFSPANVMKLLEVVRGKATSKDVLATVMDIGKKI 470

Query: 319 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 378
           KK  VV G C GF  NR    YS+ A  L+  G    ++D A+  FG  +GPF++ DLAG
Sbjct: 471 KKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAVEKFGFAMGPFRMGDLAG 530

Query: 379 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLP 437
             +  A  K      PD  + S   D L + GR G+  G G Y Y+ G +   P   V  
Sbjct: 531 NDIGWAIRKRRAVEHPDMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSELVNK 589

Query: 438 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 497
           +IE+ R+   I     P  ++++EIV+ +++ +VNE   +LE+GI  ++ D+D   + G 
Sbjct: 590 MIEDHRKELGIT----PRKISDEEIVQRLVYALVNEGAHILEDGIASKSGDIDMVYLTGY 645

Query: 498 SFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 550
            FP +RGG + +A  VG   V  ++K++++       F++P+  +++   +G   S
Sbjct: 646 GFPVWRGGPMHYASQVGLYNVAETMKRFAKNPRDDAEFWQPAPLIQKLVAEGKQFS 701


>gi|402565355|ref|YP_006614700.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
 gi|402246552|gb|AFQ47006.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cepacia GG4]
          Length = 711

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 278/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + ++++E    GL+D V  S++ L     +  ++ +   P  R+      L   +
Sbjct: 162 LMLTGRHVSADEALAFGLVDRVAHSDDTLAEGLAYTQELVSLGAPARRT-RDAQGLADRA 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  + H   +G+  E  +F + +      G
Sbjct: 221 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEATLTHAFDAGMKLERSLFLQCIDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +KVP       +P  V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 281 LVHAFFAEREAAKVPEARRASARP--VERLGVVGGGTMGAGIAVAALDAGLPVTMIERDE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 339 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 399 KKAVFAELARACKPGAVLATNTSYLDIDELAASIDRPADVIGLHFFSPANVMKLLEIVVP 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 459 ARVSADVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+  G+G 
Sbjct: 519 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 578

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ + R    I     P + T+ EI+   L  ++NE   V+ 
Sbjct: 579 YLYPDGTRVGTPDPEVEAIVADARAKQGIT----PRTFTDDEILRRYLAAMINEGANVVH 634

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ ++Q    F+KPS  +
Sbjct: 635 EKIALRPLDVDAVFLYGYGFPRYRGGPMHYADTVGLANVLADIRAFAQEDPLFWKPSPLI 694

Query: 540 EERATKG 546
            E   +G
Sbjct: 695 VELVERG 701


>gi|367472156|ref|ZP_09471747.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. ORS 285]
 gi|365275555|emb|CCD84215.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. ORS 285]
          Length = 698

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 178/548 (32%), Positives = 295/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V       V   +A  + A  +P  +      K+ +  
Sbjct: 152 MIVGGDPIGAAEALKSGLIEEIVEGPASGGVE--FARKVVAENRPLRKLRDDESKIAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ +E + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +K+ +V + G K R V +VA+IG G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKIASVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIETAE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ G +     KD D+VIEAV E++ +
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ +  +TS    ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+T+   ++  +++ + I KVP VVG C GF  NR      + A  L+  G    ++D+ 
Sbjct: 449 EKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  +I+E   L+ +  G K  +V+++EI+E +++P++NE  ++L 
Sbjct: 562 YKYEAGSRAPLPDPDVEKLIDET--LAKL--GLKRRAVSDEEILERMMYPMINEGAKILA 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           EGI  R SD+D   + G  +P YRGG ++WAD+VG  ++   L  +++   +   +P+  
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKHIAERLAFYAKETNDPSLEPAPL 677

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 678 LKKLADEG 685


>gi|365891756|ref|ZP_09430138.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. STM 3809]
 gi|365332258|emb|CCE02669.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. STM 3809]
          Length = 697

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 179/549 (32%), Positives = 298/549 (54%), Gaps = 18/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSL 59
           M++    I++ E  K GLI+ +V       V   +A  + A  +P +R L   D K+ + 
Sbjct: 152 MIVGGDPISAAEAHKAGLIEEIVEGPASGGVE--FARKVVAENRP-LRKLRDDDSKIAAA 208

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              R +   A     K +  +    A  D +   I      G+ +E + F +L+  D S+
Sbjct: 209 KADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSK 268

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              + FFA+R  +K+  V + G K R V +VA+IG G MG GIA +     I V L E  
Sbjct: 269 AQRYAFFAEREAAKIAGVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIETA 327

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  ++ N      RG +  D     + ++ G +     KD D+VIEAV E++ 
Sbjct: 328 EEQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMA 387

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  +LA+NTS ++++ +  +TS    ++G HFFSPA+VM L EIVR
Sbjct: 388 VKKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVR 447

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            ++T+   ++  +++ + I KVP VVG C GF  NR      + A  L+  G    ++D+
Sbjct: 448 ADKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDA 507

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG
Sbjct: 508 VVTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKG 560

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE GS+ P PDP V  +I+E   L+ +  G K  +V+++EI+E +++P++NE  ++L
Sbjct: 561 YYKYESGSRAPLPDPDVEKLIDET--LAKL--GLKRRNVSDEEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
            EGI  R SD+D   + G  +P YRGG ++WAD+VG  ++   L  +++   +   +P+ 
Sbjct: 617 AEGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKHIAERLSYYAKETNDPSLEPAP 676

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 677 LLKKLAEEG 685


>gi|114571197|ref|YP_757877.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Maricaulis maris MCS10]
 gi|114341659|gb|ABI66939.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Maricaulis maris MCS10]
          Length = 679

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 182/547 (33%), Positives = 291/547 (53%), Gaps = 24/547 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+     I +    ++GL+D +V  ++L +    +A  +++     I S  RTDKL ++ 
Sbjct: 151 MIAKGDPIPAAAAERIGLVDKLVADDQLAESGIAFARSVSSATTHPISS-ARTDKLDTVL 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A +     R    +        +AC++ +   I      GV KE ++F +LV    SR 
Sbjct: 210 -ADDFFDNFRKTELRRLKGFEAPEACIEAVRAAIELPFAEGVKKERELFGKLVSGTQSRA 268

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L HVFFA+RA  K+ ++  D  + P  + KV ++G G MG GIA   +   I V + E  
Sbjct: 269 LRHVFFAERAAGKIDDIPADTPVLP--IAKVGILGAGTMGGGIAMNFLTAGIAVTILERE 326

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+  I  N     +RGK T ++    +  L   LD ++  D D+VIEAV E++ 
Sbjct: 327 QDPLDRGVSIIRKNYERSASRGKFTAEQVEQCMGRLTPTLDMNDLADCDLVIEAVFENMD 386

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F++L+    P  ILA+NTS ++++ +   T   + ++G HFFSPA+VM LLE+VR
Sbjct: 387 VKKDVFTKLDSIVKPGAILASNTSYLNVDEMAAMTKRPEFVLGLHFFSPANVMRLLEVVR 446

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+ S  V+   M + K + KV VV G C GF  NR   P  Q+A  ++  G+  + +D 
Sbjct: 447 AEKASPAVLKTAMALAKKVGKVAVVSGVCHGFIGNRMLSPRQQAANAMLMQGITPWAVDD 506

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+  FG+P+GPFQ+ DLAG  +       +++   D S    + D+L +  R G+ NGKG
Sbjct: 507 ALTDFGMPMGPFQMADLAGLDLG------WNR---DASKGETIRDVLCERDRRGQKNGKG 557

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  +  P   V  +I      S    G  P S + +EI   +LFP++NE  ++L+
Sbjct: 558 FYDYDENRRRTPSAEVEEVIAAFVAKS----GQAPQSFSPEEIRNRLLFPMINEGAKILD 613

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG+  RASD+D   + G  +P+Y GG +FWAD +G + V   LK     +G+   P  +L
Sbjct: 614 EGMAQRASDIDTVWINGYGWPAYTGGPMFWADTIGLDVVVEGLKA----FGHEVSP--YL 667

Query: 540 EERATKG 546
            +RA KG
Sbjct: 668 ADRAAKG 674


>gi|393776994|ref|ZP_10365288.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
 gi|392716351|gb|EIZ03931.1| 3-hydroxybutyryl-CoA epimerase [Ralstonia sp. PBA]
          Length = 698

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 176/478 (36%), Positives = 261/478 (54%), Gaps = 16/478 (3%)

Query: 79  NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK---VP 135
           + P    C++ +E  +     +G+  E + F  L+    SR L H FF +RA  K   VP
Sbjct: 230 HFPAPLKCIEALEAAVRLPFEAGLKVEREAFLFLLTTPESRALRHAFFGERAAGKIADVP 289

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           + T +    R + KVAVIG G MG+GIA   +   + V L E   E L +G+ TI  N  
Sbjct: 290 SATPV----RDIHKVAVIGAGTMGAGIAMTFLSAGLPVTLLEARQEALERGVATIRKNYD 345

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +GKL+++KA  A+ +L+  LDY+   D D+VIEAV E + +K+ +F +L+    P 
Sbjct: 346 STVRKGKLSEEKAERAMALLQTTLDYAAIADADLVIEAVFEDMGVKETVFRQLDAVMKPG 405

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+DLN +   T+    ++G HFFSPA+VM LLE+VR  +T   V+  +M + 
Sbjct: 406 AILASNTSTLDLNAIAGFTTRPQDVVGLHFFSPANVMKLLEVVRGAQTGKDVLATVMKLA 465

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K ++K  VV G C GF  NR    Y + A  L+  G    +IDSAI  FG  +GPF++ D
Sbjct: 466 KTLRKTAVVSGVCDGFIGNRMVEQYVRQAGFLLDEGCTPQQIDSAIERFGFAMGPFRMCD 525

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPS 434
           LAG  +  A      +  PD ++ S   D L   GR G+  G G Y Y  G +   P P 
Sbjct: 526 LAGNDIWQAIRTRKLQEHPDLAY-STTADQLCALGRFGQKTGAGWYDYVPGDRTAHPSPV 584

Query: 435 VLPIIEECRRLSNIMPGGKPI-SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 493
           V  ++ +     ++   G P   V+++EIVE +++ +VNE   +LEEGI  +ASD+D   
Sbjct: 585 VAGLLAK-----HVAASGVPQRQVSDEEIVERLVYALVNEGAAILEEGIAAKASDIDMVY 639

Query: 494 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKGIPLS 550
           + G  FP +RGG + +AD VG + V   ++ +S  Y G  +KP+  L   A  G  L+
Sbjct: 640 LTGYGFPLHRGGPMLYADMVGLDKVLARMQSFSTGYHGELWKPAPLLVRLAAAGKGLT 697


>gi|421602426|ref|ZP_16045030.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404265468|gb|EJZ30544.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 594

 Score =  295 bits (754), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 179/548 (32%), Positives = 293/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V  E        +   + A ++P  R      KL +  
Sbjct: 48  MIVGGDPIGAAEALKKGLIEEIV--EGPASGGEAFVRKLIAEKRPLRRLRDDDSKLAAAK 105

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 106 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGCAIDLPFDEGLKKEREGFLKLVASDQSKA 165

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +K+  V + G K R V +VA++G G MG GIA +     I V L E   
Sbjct: 166 QRYAFFAEREANKIAGVPE-GTKGRPVNRVAILGAGTMGGGIAMSFANAGIPVTLIETAE 224

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + +++G +      D D+VIEAV E++ +
Sbjct: 225 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIEGKVGIENVGDADLVIEAVFETMAV 284

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 285 KKEVFGKLDQYAKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 344

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   ++  +T+ + I KVP VVG C GF  NR     S+ +  L+  G    ++D+ 
Sbjct: 345 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRSKQSEKLLFEGALPQQVDAV 404

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 405 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 457

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  +I+E    + +  G K   V+++EI+E +++P+VNE  ++LE
Sbjct: 458 YKYEAGSRAPMPDPEVEKLIDE----TLLRLGRKKRVVSDEEILERMMYPMVNEGAKILE 513

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           EGI  R SD+D   + G  +P YRGG +FWAD+VG  ++   L  +++   +   +P+  
Sbjct: 514 EGIAARPSDIDVVWLYGYGWPIYRGGPMFWADSVGLKHIADRLSFYAKETNDPSLEPAPL 573

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 574 LKKLAAEG 581


>gi|94313504|ref|YP_586713.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
           dehydrogenase (C-terminal) [Cupriavidus metallidurans
           CH34]
 gi|93357356|gb|ABF11444.1| multifunctional: 3-hydroxybutyryl-CoA epimerase,
           delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase,
           enoyl-CoA hydratase (N-terminal); 3-hydroxyacyl-CoA
           dehydrogenase (C-terminal) [Cupriavidus metallidurans
           CH34]
          Length = 696

 Score =  295 bits (754), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 181/490 (36%), Positives = 265/490 (54%), Gaps = 13/490 (2%)

Query: 39  IAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 97
           IAA+  P      RT  L  S  +    L+ AR    + A         L+ +   +   
Sbjct: 192 IAAKTPP-----RRTRALSVSHPQGESFLQFARNSVAQQAKGQIAPMKALEAVAASLTKS 246

Query: 98  GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 157
              G+  E + F  L+    SR L H+F A+ A SK+ ++   G   R +RKV VIG G 
Sbjct: 247 FDEGMRVEREGFMSLMASPESRALRHIFKAEHAASKIADLP-AGTPLREIRKVGVIGAGT 305

Query: 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217
           MG GI    +   I VVL E+  E L KG+ TI  N    + +GKL  ++    + ++ G
Sbjct: 306 MGGGITMNFLNAGIPVVLLEMKQEALDKGLATIRRNYENSMKKGKLKPEQVEQRMGLITG 365

Query: 218 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 277
            L Y++  DVD+VIEAV E++ +K+ +F  L+K C    ILA+NTS ++L+ +   T   
Sbjct: 366 TLSYADLSDVDLVIEAVFENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIASFTKRP 425

Query: 278 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 337
             +IG HFFSPA+VM LLEIVR  +T+  V+   M + K IKK+ VV G C GF  NR  
Sbjct: 426 TDVIGLHFFSPANVMRLLEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFIGNRML 485

Query: 338 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 397
             Y  +A  L++ G    +ID A++ FG+ +GP+++ DLAG  +  AT K    A     
Sbjct: 486 ARYGAAAGALINAGALPQQIDGALQKFGMAMGPYRMGDLAGLDIGYATRKR-KAAEAGVP 544

Query: 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPIS 456
            +  + D L ++GR G+  G G Y YE G++ P PDP+   +I E R    I     P +
Sbjct: 545 LRPSVADKLAEAGRLGQKTGAGWYRYEAGNRDPIPDPATEALIAEFRSAQGI----TPRA 600

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
           ++++E+VE  +F +VNE  R+LEEGI  RASDLD   + G  FP  RGG + +AD VG  
Sbjct: 601 ISDEEVVERCIFALVNEGARILEEGIAARASDLDVVYLNGYGFPRLRGGPMLYADMVGLP 660

Query: 517 YVYTSLKKWS 526
            V  SL++++
Sbjct: 661 NVVRSLRRFA 670


>gi|397688839|ref|YP_006526158.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
 gi|395810395|gb|AFN79800.1| enoyl-CoA hydratase [Pseudomonas stutzeri DSM 10701]
          Length = 701

 Score =  295 bits (754), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 187/556 (33%), Positives = 291/556 (52%), Gaps = 18/556 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSE----ELLKVSRLWALDIAARRK-PWIRSLHRTDK 55
           M+L    + ++E  +  L+D +   +     L    RL   D   RR     R L   D 
Sbjct: 152 MILSGAPVEAKEACEHQLVDELFEGDLVDAGLAYARRLLQEDRGVRRSGEQTRGLEGADN 211

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
             +L  AR        +  K +P +     C+  +E         G+ +E ++F E +  
Sbjct: 212 -AALIAARHA------EVVKRSPGLFSPLRCIAAVEAATRLPLVEGLARERELFLECLNS 264

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
                LVH FFA+R  SK+ ++     +PR +R  AVIGGG MG GIA       + V L
Sbjct: 265 PQRAALVHTFFAERQASKIADLP-ADTRPREIRTAAVIGGGTMGVGIALCFANAGVPVKL 323

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            EV+ E L + ++         V RG L++      L +++G+ DY+   DVD+V+EAV 
Sbjct: 324 LEVSDEALQRALQRARDTYAISVKRGSLSEAAMAQRLALIEGITDYAALADVDLVVEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +KQ++F  L+  C P  ILA+NTS++DLN +   T     ++G HFFSPA+VM LL
Sbjct: 384 EDMAVKQQVFERLDAVCKPGAILASNTSSLDLNAIAAFTRRPQDVVGLHFFSPANVMRLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E+VR  +TS +V+   M +G+ +KKV VVVG C GF  NR  F Y + A  L+  G    
Sbjct: 444 EVVRGAQTSHEVLATAMAIGRKLKKVAVVVGVCDGFVGNRMLFQYGREAEFLLEEGATPQ 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
           ++D+ +R+FG+ +GPF + DLAG  +  A  K      P       + D L  +G  G+ 
Sbjct: 504 QVDAVLRNFGMAMGPFAVRDLAGLDIGQAIRKRQRAILPAHLEFPTVADRLCAAGMLGQK 563

Query: 416 NGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            G G Y YE G++ P  +P++ P++    R   I    +   + ++ IVE  L+ +VNE 
Sbjct: 564 TGVGYYRYEPGNRTPLENPALAPMLAAASREKGI----ERRELDKQYIVERTLYSLVNEG 619

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            ++LEEGI  R+SD+D   + G  FP++RGG +F+AD+VG   V   +K+     G++++
Sbjct: 620 AKILEEGIAQRSSDIDIIYLNGYGFPAWRGGPMFYADSVGLANVLAKVKELHARCGDWWR 679

Query: 535 PSRFLEERATKGIPLS 550
           P+  LE+ A +G   S
Sbjct: 680 PAPLLEKLAAEGRTFS 695


>gi|186475793|ref|YP_001857263.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
 gi|184192252|gb|ACC70217.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
           STM815]
          Length = 694

 Score =  295 bits (754), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 188/547 (34%), Positives = 291/547 (53%), Gaps = 10/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+     + D +V    LL+ +  +A  + A+  P  +   R   +G   
Sbjct: 152 MIVSGTPVMSEKLAGTPMFDQMVEGN-LLEDALAFARKVGAQSGPHPKIRDRN--IGH-P 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A   P    C+D IE G++ G   GV  E + F  LV    S+ 
Sbjct: 208 NAAGFIQFARNSVAGVAKQYPAPHKCIDAIEAGVLKGFDHGVKVERECFLALVQTPESKA 267

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA SK+P+V       R + KV VIG G MG GIA   +   + V L E+  
Sbjct: 268 LRHAFFGERAASKIPDVPS-DTPARNIDKVGVIGAGTMGGGIAMNFVNAGLPVTLLEMKQ 326

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           + L +G+ TI  N    V +GKLT +     + ++   L Y    D D++IEAV E + +
Sbjct: 327 DALERGLATIRKNYEATVKKGKLTMEALEQRMSLITPTLTYEALGDADLIIEAVYEELGV 386

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ L++   P  ILA+NTST+DLN +   T     ++G HFFSPA+VM LLE+VR 
Sbjct: 387 KEQVFTRLDEVAKPGAILASNTSTLDLNKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRG 446

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+  V+  +M V K I+K  VV G C GF  NR    Y + A  ++  G    ++D A
Sbjct: 447 KDTAKDVLATVMQVAKKIRKTAVVSGVCDGFIGNRMVEQYVRQALFMLEEGALPAQVDKA 506

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I  FG  +GPF++ DLAG  +  A  K   +  P   + S + D L ++GR G+  G G 
Sbjct: 507 IEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEEPHMRY-SKIADRLCEAGRFGQKTGGGW 565

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y+ G +    PS  PI E     S  + G +   +++ EIVE ++F +VNE  ++LEE
Sbjct: 566 YDYKAGDR-NAYPS-KPIDEMIVAHSKEL-GIERRKISDDEIVERLVFALVNEGAKILEE 622

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPSRFL 539
           GI  +ASD+D   + G  FP +RGG + +AD+VG   V  +++++ +Q  G+ ++ +  +
Sbjct: 623 GIASKASDIDMVYLTGYGFPLWRGGPMLYADSVGLYNVERAIRRYAAQPNGDAWQIAAGI 682

Query: 540 EERATKG 546
            ERA +G
Sbjct: 683 VERAAQG 689


>gi|330826648|ref|YP_004389951.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
 gi|329312020|gb|AEB86435.1| 3-hydroxybutyryl-CoA epimerase [Alicycliphilus denitrificans K601]
          Length = 705

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 160/447 (35%), Positives = 251/447 (56%), Gaps = 7/447 (1%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           GV +E ++F E +      GLVH FFA+R T+K+P        PR   K+A+IGGG MG+
Sbjct: 255 GVKRERELFLECLNSPQRAGLVHAFFAERETAKIPEAR--AAAPRHFAKLAIIGGGTMGA 312

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI  A +   + VV+ E ++E + +G K +E    GL+ +G++T +     +   +    
Sbjct: 313 GITVAALDAGLSVVMIERDAESIARGRKNVEKVYDGLIAKGRMTAEAKAATMARYQPSTS 372

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y + KDVD+VIEAV E + +K+ +F EL++ C    +LATNTS +D++ +   TS    +
Sbjct: 373 YDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDV 432

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG HFFSPA++M LLEIV   + +  V++    + K +KKVPV  G C GF  NR    Y
Sbjct: 433 IGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFELAKRMKKVPVRAGVCDGFIGNRILSVY 492

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            ++A  ++  G   + ID+A+R FG P+GPFQ+ DLAG  +  AT K        R+   
Sbjct: 493 REAANYMLEDGASPYEIDAAVREFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPRARYV 552

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
            + D + + G  G+  G+G Y Y +G++  + DP VL I++  R    I     P + T 
Sbjct: 553 EIADRIAERGWYGQKTGRGWYLYPEGARTGQQDPEVLAIVDAERTKKGIT----PRAFTH 608

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EI+   +  +VNE  +VLEEGI +R  D+D   + G  FP +RGG + WAD  G   V 
Sbjct: 609 EEIMRRYMAAMVNECAKVLEEGIALRPLDIDVTFLFGYGFPRWRGGPMQWADMQGLPKVL 668

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATKG 546
             ++ +++    F++P+  L++   +G
Sbjct: 669 ADIEAFAKEDALFWQPAPLLKKLVAEG 695


>gi|83859319|ref|ZP_00952840.1| fatty oxidation complex, alpha subunit [Oceanicaulis sp. HTCC2633]
 gi|83852766|gb|EAP90619.1| fatty oxidation complex, alpha subunit [Oceanicaulis alexandrii
           HTCC2633]
          Length = 680

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 184/546 (33%), Positives = 289/546 (52%), Gaps = 21/546 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+     I++E+   LGL+D +V +++L + + +          P  R+  RTDKL + +
Sbjct: 150 MIAKGDPISAEKAQSLGLVDELVEADKL-RDAAIAFARARIADGPR-RTGARTDKLSADA 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E       A+  A++    M   QAC++ ++         G+  E ++F +L+  D S  
Sbjct: 208 EVFHAF--AQKNARRFR-GMDAPQACIEAVKAATEKPLSEGLKLERELFTKLMTGDQSAA 264

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPR-GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H+FFA+RA +K+ ++      PR  V  V VIG G MG GI    +   I V L E  
Sbjct: 265 LRHLFFAERAAAKIDDIAKD--TPRKTVSSVGVIGAGTMGGGITMNFLSAGIPVTLVERE 322

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
              L +G+ TI  N      +G+L+QD+   A+ +L   L+     D D++IEAV E + 
Sbjct: 323 QAALDRGVATIRKNYEASAAKGRLSQDQVEKAMALLTPTLEMDALSDCDLIIEAVFELMR 382

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K++IF+ L+       ILATNTS +D+N +   T   + ++G HFFSPA++M LLEIVR
Sbjct: 383 IKKEIFTALDSIAKKDAILATNTSYLDVNEIAAVTQRPESVLGLHFFSPANIMKLLEIVR 442

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+   M + + I KV VV G C GF  NR        A  L+  G   + +D 
Sbjct: 443 GAKTADTVLATAMDLSRRIGKVAVVAGVCHGFIGNRMLAQRQAEANSLILEGAKPWDVDR 502

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FGLP+GPFQ+ DLAG  +       +D   PD +  S + ++L +  R G+  G G
Sbjct: 503 VLVEFGLPMGPFQMADLAGLDIG------WD---PDATSSSTVREILCEQDRRGQKTGAG 553

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  +  P   V  +I E    +    G +  ++ ++EI E +L+P+VNE  ++L+
Sbjct: 554 FYDYDQNRRGAPSEHVERLIAEFAEKA----GYEQRAIDDQEIRERLLYPMVNEGAKILD 609

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI  RASD+D   V G  +P+YRGG +FWAD +GA  V   L+K +    + F+ S FL
Sbjct: 610 EGIAQRASDIDVVWVYGYGWPTYRGGPMFWADQIGAKTVLEGLEKHADRLADSFEISPFL 669

Query: 540 EERATK 545
             +A +
Sbjct: 670 RRKAEE 675


>gi|319764427|ref|YP_004128364.1| 3-hydroxyacyl-CoA dehydrogenase [Alicycliphilus denitrificans BC]
 gi|317118988|gb|ADV01477.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Alicycliphilus
           denitrificans BC]
          Length = 705

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 160/447 (35%), Positives = 251/447 (56%), Gaps = 7/447 (1%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           GV +E ++F E +      GLVH FFA+R T+K+P        PR   K+A+IGGG MG+
Sbjct: 255 GVKRERELFLECLNSPQRAGLVHAFFAERETAKIPEAK--AAAPRHFAKLAIIGGGTMGA 312

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI  A +   + VV+ E ++E + +G K +E    GL+ +G++T +     +   +    
Sbjct: 313 GITVAALDAGLSVVMIERDAESIARGRKNVEKVYDGLIAKGRMTAEAKAATMARYQPSTS 372

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y + KDVD+VIEAV E + +K+ +F EL++ C    +LATNTS +D++ +   TS    +
Sbjct: 373 YDDIKDVDLVIEAVFEDIEVKKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDV 432

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG HFFSPA++M LLEIV   + +  V++    + K +KKVPV  G C GF  NR    Y
Sbjct: 433 IGLHFFSPANIMKLLEIVVPAKVAPDVVVTAFELAKRMKKVPVRAGVCDGFIGNRILSVY 492

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            ++A  ++  G   + ID+A+R FG P+GPFQ+ DLAG  +  AT K        R+   
Sbjct: 493 REAANYMLEDGASPYEIDAAVREFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPRARYV 552

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
            + D + + G  G+  G+G Y Y +G++  + DP VL I++  R    I     P + T 
Sbjct: 553 EIADRIAERGWYGQKTGRGWYLYPEGARTGQQDPEVLAIVDAERTKKGIT----PRAFTH 608

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EI+   +  +VNE  +VLEEGI +R  D+D   + G  FP +RGG + WAD  G   V 
Sbjct: 609 EEIMRRYMAAMVNEGAKVLEEGIALRPLDIDVTFLFGYGFPRWRGGPMQWADMQGLPKVL 668

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATKG 546
             ++ +++    F++P+  L++   +G
Sbjct: 669 ADIEAFAKEDALFWQPAPLLKKLVAEG 695


>gi|118590370|ref|ZP_01547772.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
           3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
           [Stappia aggregata IAM 12614]
 gi|118436833|gb|EAV43472.1| Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase,
           3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein
           [Stappia aggregata IAM 12614]
          Length = 704

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 186/543 (34%), Positives = 286/543 (52%), Gaps = 32/543 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSE----ELLKVSRLWALDIAARRKPWIRSLHRTDKL 56
           M+   K + ++E    GLID +V  +     L     L A D+  R            K 
Sbjct: 163 MITSGKPMAADEALSHGLIDRIVEGDPRDIALSSAKDLLAGDLPNR------------KT 210

Query: 57  GSLSEARE--VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 114
           G L+   +   +K  R +  K+ P +     C+D +E    H      +KE +   E  M
Sbjct: 211 GELTAEPDPAAIKAMRTKLAKSQPLLFSPHKCVDAVEA--CHLPIREGMKEERRLYEECM 268

Query: 115 LDTSR-GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 173
               R GL+H FF++RA +K+P  T      R +  V VIGGG MGSGIATA +L  + V
Sbjct: 269 ASPQRAGLIHAFFSERAVTKIPEATATA---REINSVGVIGGGTMGSGIATAILLVGLPV 325

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM-LKGVLDYSEFKDVDMVIE 232
            L E + + L +G+ TI  N+ G V RGKL+ +  ++ L   L    D +   + D+VIE
Sbjct: 326 TLTERDQDGLDRGVATITRNLEGAVKRGKLSAEARDDILAAKLTTSTDLAALAEADLVIE 385

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + +K++IF  L+K C P  +LA+NTS +D+N +   TS    +IG HFFSPAHVM
Sbjct: 386 AVFEDMGVKREIFQTLDKVCKPGTVLASNTSYLDINEIAATTSRPQDVIGLHFFSPAHVM 445

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLE+V  ++T A V+     + + +KK+ V  G C GF  NR    Y ++A  ++  G 
Sbjct: 446 RLLEVVVADKTGADVVATGFALARKLKKIAVRSGVCDGFIGNRIMTFYKKTADYMMMDGA 505

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
               ID+A+R FG  +GP+Q+ DLAG  ++ A +K      P      P+ D L ++G  
Sbjct: 506 SPEEIDTAMRGFGFAMGPYQVADLAGLDISWAANKRRAATRPAEERYIPIADRLCENGWF 565

Query: 413 GKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+  G+G Y Y ++GS+P P+   L II+  R  + +     P S TE+EIV   +  ++
Sbjct: 566 GRKTGQGFYIYDDQGSRPNPE--ALAIIDAEREKAGV----TPRSFTEEEIVSRFMTAMI 619

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           +E  RVLEEGI +R  D+D   + G  FP +RGG +  AD +G   +   ++++++    
Sbjct: 620 SEVVRVLEEGIALRPIDIDAVFLNGYGFPRFRGGPLHTADVIGPGELVRRIEEYAKEDAY 679

Query: 532 FFK 534
           ++K
Sbjct: 680 YWK 682


>gi|27382932|ref|NP_774461.1| fatty oxidation complex subunit alpha [Bradyrhizobium japonicum
           USDA 110]
 gi|27356105|dbj|BAC53086.1| bll7821 [Bradyrhizobium japonicum USDA 110]
          Length = 698

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 177/548 (32%), Positives = 292/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V  E        +   + A ++P  R      KL +  
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLLAEKRPLRRLRDDDSKLAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDFPFDEGLKKEREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +K+  V + G K R V +VA++G G MG GIA +     + V L E   
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+      D D+VIEAV E++ +
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGIPADAPAKRMALITGVVGIENVGDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQFAKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   ++  +T+ + I KVP VVG C GF  NR      + +  L+  G    ++D+ 
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+   PDP V  +I+E   L+ +  G K  +V+++EI+E +++P++NE  ++LE
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDET--LARL--GRKKRAVSDEEILERMMYPMINEGAKILE 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           EGI  R SD+D   + G  +P YRGG +FWAD VG  ++   L  +++   +   +P+  
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLSFYAKETNDPSLEPAPL 677

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 678 LKKLAAEG 685


>gi|332530996|ref|ZP_08406918.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
           ATCC 19624]
 gi|332039557|gb|EGI75961.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Hylemonella gracilis
           ATCC 19624]
          Length = 701

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 194/536 (36%), Positives = 281/536 (52%), Gaps = 19/536 (3%)

Query: 18  LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS---LSEAREVLKLARLQAK 74
           L D V  S E L +    AL   AR K  +R L +   L +   L +A    + AR    
Sbjct: 172 LFDKVAQSAETL-LDEALAL---AREKADVRPLPKVRDLPAKHPLGDA--YFQFARNTVG 225

Query: 75  KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134
             A N P    C+D +E         G+  E + F  L+     R L HVF A+RA SK+
Sbjct: 226 AMAKNFPAPLKCVDAVEAATKKKFDDGIAYEREHFINLMWTPECRALRHVFAAERAASKI 285

Query: 135 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 194
            +V +   K R ++ VAVIG G MG GI    +   I V + E   E L +G+ TI  N 
Sbjct: 286 ADVPEDTPK-REIKSVAVIGAGTMGGGITMNFLNAGIPVKVLETKQEALDRGLATIRKNY 344

Query: 195 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 254
              V +GKL QDK    + +L   L+Y + K  D+VIEAV E + +K+ +F +L++   P
Sbjct: 345 EAQVGKGKLKQDKYEQRMALLSTTLNYDDIKYADLVIEAVFEEMGVKEAVFKKLDEVMKP 404

Query: 255 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 314
             ILA+NTST+DLN +   T     ++G HFFSPA+VM LLE+VR  +T   V+  +M +
Sbjct: 405 GAILASNTSTLDLNKIASFTKRPQDVVGLHFFSPANVMKLLEVVRGAKTGKDVLATVMAL 464

Query: 315 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 374
            K IKK  VV G   GF  NR    YS+ A  L+  G    ++D AI  FG  +GPF++ 
Sbjct: 465 AKTIKKTAVVSGVTDGFIGNRMIEQYSRQAGFLLEEGATPEQVDKAIEKFGFAMGPFRMG 524

Query: 375 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDP 433
           DLAG  +  A  K      P   + S   D L + GR G+  G G Y Y+ G +   P  
Sbjct: 525 DLAGNDIGWAIRKRRYVEKPGMKY-SKTADKLCELGRFGQKTGAGWYDYKPGKRDAIPSE 583

Query: 434 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 493
            V  +IE+ R+   I     P  ++E+EIVE +++ +VNE+ R+LEEGI  +ASD+D   
Sbjct: 584 LVNQMIEDHRKALGIT----PRKISEQEIVERLVYSLVNEAARILEEGIASKASDIDMVY 639

Query: 494 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
           + G  FP +RGG + +AD VG   V  S+K++++       F++P+  L++   +G
Sbjct: 640 LTGYGFPLWRGGPMQYADTVGLFNVAESMKRYAKNPLDDTQFWQPAPLLQKLVAEG 695


>gi|365883354|ref|ZP_09422509.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. ORS 375]
 gi|365288201|emb|CCD95040.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. ORS 375]
          Length = 697

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 179/549 (32%), Positives = 297/549 (54%), Gaps = 18/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSL 59
           M++    I++ E  K GLI+ +V       V   +A  + A  +P +R L   D K+ + 
Sbjct: 152 MIVGGDPISAAEAHKSGLIEEIVEGPASGGVE--FARKVVAENRP-LRKLRDDDSKIAAA 208

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              R +   A     K +  +    A  D +   I      G+ +E + F +L+  D S+
Sbjct: 209 KADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSK 268

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              + FFA+R  +K+  V + G K R V +VA+IG G MG GIA +     I V L E  
Sbjct: 269 AQRYAFFAEREAAKIAGVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIETA 327

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  ++ N      RG +  D     + ++ G +     KD D+VIEAV E++ 
Sbjct: 328 EEQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMA 387

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  +LA+NTS ++++ +  +TS    ++G HFFSPA+VM L EIVR
Sbjct: 388 VKKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVR 447

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            ++TS   ++  +++ + I KVP VVG C GF  NR      + A  L+  G    ++D+
Sbjct: 448 ADKTSPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDA 507

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG
Sbjct: 508 VVTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKG 560

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE GS+ P PDP V  +I+E   L+ +  G K  +V+++EI+E +++P++NE  ++L
Sbjct: 561 YYKYESGSRAPLPDPDVEKLIDET--LAKL--GLKRRNVSDEEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
            EG+  R SD+D   + G  +P YRGG ++WAD+VG  ++   L  ++    +   +P+ 
Sbjct: 617 AEGVAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKHIAERLSYYANETNDPSLEPAP 676

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 677 LLKKLAEEG 685


>gi|430808528|ref|ZP_19435643.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
 gi|429499103|gb|EKZ97555.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus sp. HMR-1]
          Length = 696

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 181/490 (36%), Positives = 265/490 (54%), Gaps = 13/490 (2%)

Query: 39  IAARRKPWIRSLHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHG 97
           IAA+  P      RT  L  S  +    L+ AR    + A         L+ +   +   
Sbjct: 192 IAAKTPP-----RRTRALSVSHPQGESFLQFARNSVAQQAKGQIAPMKALEAVAASLTKS 246

Query: 98  GYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 157
              G+  E + F  L+    SR L H+F A+ A SK+ ++   G   R +RKV VIG G 
Sbjct: 247 FDEGMRVEREGFMSLMASPESRALRHIFKAEHAASKIADLP-AGTPLREIRKVGVIGAGT 305

Query: 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217
           MG GI    +   I VVL E+  E L KG+ TI  N    + +GKL  ++    + ++ G
Sbjct: 306 MGGGITMNFLNAGIPVVLLEMKQEALDKGLATIRRNYENSMKKGKLKPEQLEQRMALITG 365

Query: 218 VLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ 277
            L Y++  DVD+VIEAV E++ +K+ +F  L+K C    ILA+NTS ++L+ +   T   
Sbjct: 366 TLSYADLSDVDLVIEAVFENMDVKKTVFETLDKTCKAGAILASNTSYLNLDRIASFTKRP 425

Query: 278 DRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 337
             +IG HFFSPA+VM LLEIVR  +T+  V+   M + K IKK+ VV G C GF  NR  
Sbjct: 426 TDVIGLHFFSPANVMRLLEIVRGAQTAPDVLATCMALAKKIKKIAVVSGVCDGFIGNRML 485

Query: 338 FPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 397
             Y  +A  L++ G    +ID A++ FG+ +GP+++ DLAG  +  AT K    A     
Sbjct: 486 ARYGAAAGALINAGALPQQIDGALQKFGMAMGPYRMGDLAGLDIGYATRKR-KAAEAGVP 544

Query: 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPIS 456
            +  + D L ++GR G+  G G Y YE G++ P PDP+   +I E R    I     P +
Sbjct: 545 LRPSVADKLAEAGRLGQKTGAGWYRYEAGNRDPIPDPATETLIAEFRSAQGI----TPRA 600

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
           ++++E+VE  +F +VNE  R+LEEGI  RASDLD   + G  FP  RGG + +AD VG  
Sbjct: 601 ISDEEVVERCIFALVNEGARILEEGIAARASDLDVVYLNGYGFPRLRGGPMLYADMVGLP 660

Query: 517 YVYTSLKKWS 526
            V  SL++++
Sbjct: 661 NVVRSLRRFA 670


>gi|334343757|ref|YP_004552309.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
 gi|334100379|gb|AEG47803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
          Length = 680

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 180/550 (32%), Positives = 286/550 (52%), Gaps = 25/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + + +G +LGL+D +   ++L   +  +A  +   R        RT  L + +
Sbjct: 149 MIVSGSPVPAAKGAELGLVDKLAAQDQLAAEAIAFARTVDGPR--------RTGDLDASA 200

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A    + A    +K    +   +AC++ ++         G LKE  +F +L+  D S+ 
Sbjct: 201 TADVFERFAENNKRKIG-ALDAPKACIEAVKAATELPLDQGQLKERALFTQLMNGDQSKA 259

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L HVFFA+RA +KV  +  D+  +P  + KV VIG G MG GI+   +   I V + E+ 
Sbjct: 260 LRHVFFAERAAAKVDGLPKDVARRP--IAKVGVIGAGTMGGGISMNFLSAGIPVTIVEMT 317

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L KG   I  N      +G+LT  +   A+ +L   LD+   K+ D++IEAV E++ 
Sbjct: 318 QEALDKGTGLIRKNYEATAAKGRLTMAQVEKAMGLLSPTLDFDALKECDLIIEAVYENMD 377

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K++IF+ L+    P  +LA+NTS + ++ +   T     ++G HFFSPA+VM L+E+VR
Sbjct: 378 VKKEIFTRLDGIAKPGALLASNTSYLSIDEIASATGRPQDVLGLHFFSPANVMKLVEVVR 437

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +T+  V+   M +G+ I KVPVV G C GF  NR   P    A  ++  G    ++D 
Sbjct: 438 GAKTAPDVLATGMDIGRRIGKVPVVSGVCYGFIGNRMLAPRLNGAIAMLVEGATAEQVDR 497

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
               FG+P+GP Q++DLAG  +            P+R     + D L  +GR G+  G G
Sbjct: 498 VSVEFGMPMGPLQMIDLAGVDIGWHRD-------PNRI--ESVRDALNAAGRWGQKTGAG 548

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  +P P P+   II++ R    +     P +++E EIV   L+ +VNE+  +LE
Sbjct: 549 FYDYDERRRPAPSPAAQAIIDDFRAREGV----APRAISEDEIVTRTLYVMVNEAAHILE 604

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI  RASD+D     G  +P ++GG +FWAD VG N +  +L ++    G  F  S  L
Sbjct: 605 EGIAQRASDIDIVWNYGYGWPRHKGGPMFWADLVGLNKIVDALDRYRDRLGPEFTLSPLL 664

Query: 540 EERATKGIPL 549
              A +G PL
Sbjct: 665 ARCAKEGRPL 674


>gi|386400122|ref|ZP_10084900.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
 gi|385740748|gb|EIG60944.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM1253]
          Length = 698

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 182/564 (32%), Positives = 298/564 (52%), Gaps = 21/564 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V  E        +   + A ++P  R      K+ +  
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPAAGGEAFVRKLLAEKRPLRRLRDDDSKIAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  SK+  V + G KPR V +VA++G G MG GIA +     + V L E   
Sbjct: 270 QRYAFFAEREASKIAGVPE-GTKPRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+      D D+VIEAV E++ +
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   ++  +++ + I KVP VVG C GF  NR      + +  L+  G    ++D+ 
Sbjct: 449 DKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSKPK-PDPSVLPIIEEC-RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE GS+   PDP V  +I+E   RL     G K   V++ EI+E +++P++NE  ++L
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETLLRL-----GRKKRVVSDDEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
           EEGI  R SD+D   + G  +P YRGG +FWAD VG  ++   L  +++   +   +P+ 
Sbjct: 617 EEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLSFYAKETNDPSLEPAP 676

Query: 538 FLEERATKGIPLSAPVSSSSTSRA 561
            L++ A +G   +   S ++TS+A
Sbjct: 677 LLKKLAAEGKTFA---SLAATSKA 697


>gi|407713391|ref|YP_006833956.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
           BR3459a]
 gi|407235575|gb|AFT85774.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
           BR3459a]
          Length = 692

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 180/528 (34%), Positives = 277/528 (52%), Gaps = 13/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + S++    GL D +V  + L + +  +A  + A+  P  +   R        
Sbjct: 150 MIVSGAPVDSQKLAGSGLFDELVEGD-LAEAALAFARKVGAQAGPHPKVRERKI---DHP 205

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A + P    C+D +E G+ HG   G+  E + F  LV    SR 
Sbjct: 206 NAEGFIQFARNSVAAVAKHFPAPLKCIDAVEAGVKHGFDKGLAFERECFVALVQTPESRA 265

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V  D  +  R +R+VAVIG G MG GIA   +   I V L E  
Sbjct: 266 LRHAFFGERAASKIPDVPADTPV--REIRRVAVIGAGTMGGGIAMNFVNAGIPVTLLETK 323

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKL        + ++   L Y + KD D+++EAV E + 
Sbjct: 324 QEALQRGLATIRGNYEASVKKGKLKAGALEARMALITPTLSYDDLKDADLIVEAVFEELG 383

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 384 VKEQVFRRLDEIAKPGAILASNTSTLDVNRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 443

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 444 GRETAKDVLATVMKLAKQIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 503

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L ++GR G+  G G
Sbjct: 504 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEQPDLHY-SKIADRLCETGRFGQKTGGG 562

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y  G +  +P   V  +I    +  N     +   + + EIVE ++F +VNE  ++L
Sbjct: 563 WYDYVAGERTARPSKLVDDMIVAYSKEVN----AERRKIGDDEIVERLVFALVNEGAKIL 618

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           EEGI  +ASD+D   + G  FP +RGG + +AD VG   V  ++++++
Sbjct: 619 EEGIASKASDIDMVYLTGYGFPLHRGGPMLYADTVGLYNVERAIRRYA 666


>gi|398812807|ref|ZP_10571521.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
 gi|398076521|gb|EJL67581.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
          Length = 700

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 188/551 (34%), Positives = 283/551 (51%), Gaps = 18/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L    I +    +LGL++AV+  E LL  +R +A  + A          R  +   + 
Sbjct: 155 IILSGAPIKAPRAHELGLVNAVIMGE-LLAGARAFARRVVAEGAALPLVAQRALEPAGVD 213

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A     +       TA      +A +D ++         G+ +E  +F ELV    S+ 
Sbjct: 214 FAERRRAVPARARNATA-----QRAAVDAVQASTQLALEDGLTRERALFDELVAGPESKA 268

Query: 121 LVHVFFAQRATSKVPNVTDIGLKP---RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           L H+FFA+R   K+       L P   R VRKVAV+G G MG GIA A     I VVL E
Sbjct: 269 LRHLFFAEREAPKLSET----LAPTELRVVRKVAVLGAGTMGGGIAMAFANAGIPVVLLE 324

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
                + +G+  +  N    V +GKL++      + +++  LD++   DVD+VIEAV E 
Sbjct: 325 REQAAIDRGLDLVRRNYGVTVAKGKLSEAAMAGRMALIEPALDFAALHDVDLVIEAVFED 384

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+++F +L+  C P  ILATNTS + ++ +   TS    +IG HFFSPA+VM LLE+
Sbjct: 385 MAVKKEVFEQLDAHCKPGAILATNTSRLSIDEIARSTSRPQDVIGLHFFSPANVMRLLEV 444

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR E T   VI   M + + I K+PV+V  C GF  NR    Y + A  L+  G    ++
Sbjct: 445 VRGEGTLPAVIAACMKMAQDIGKIPVLVRVCEGFVGNRMLTGYWREAGFLLEEGASPQQV 504

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D A+  FG+ +GP  + DLAG  +  AT K      P     S + D + ++GR G+   
Sbjct: 505 DRAMTGFGMAMGPLAMADLAGMDINWATRKRLAPTRPAHLRYSKVADRICEAGRYGQKTS 564

Query: 418 KGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
            G Y YE GS+ P PDP V  IIE C   + I+      +V +++IVE  +  +VNE  R
Sbjct: 565 AGYYRYEAGSRTPIPDPLVDMIIESCAAEAGIVRH----TVRDEDIVERCVLALVNEGVR 620

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           +L+EG+  RASD+D   V G  FP+ RGG +FWA+ +G       ++     +G  + P+
Sbjct: 621 ILDEGVAQRASDIDVVYVHGYGFPASRGGPMFWAETLGLAQTLERIRALQATHGAHWTPA 680

Query: 537 RFLEERATKGI 547
             L ER  +G+
Sbjct: 681 PGLVERVERGL 691


>gi|311107837|ref|YP_003980690.1| fatty acid oxidation complex subunit alpha [Achromobacter
           xylosoxidans A8]
 gi|310762526|gb|ADP17975.1| fatty acid oxidation complex subunit alpha 1 [Achromobacter
           xylosoxidans A8]
          Length = 700

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 189/547 (34%), Positives = 276/547 (50%), Gaps = 16/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   K + +     +GL+DAV   + LL  +  +A + AA+    + +    D  G   
Sbjct: 165 MIQSGKPMDATAAMAVGLVDAVAEGD-LLDFALSYARERAAQDSHPLAARRALDAGGVDF 223

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A      AR      A N    +A +D +E         G+ +E ++F  LV  D S+ 
Sbjct: 224 AA------ARAGVNPKARNAIAQRAVIDCLEAATRQPIEPGLDEERRLFDALVEGDASKA 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R   + P VT  G   R + +V ++G G MG GIA A+      V L E   
Sbjct: 278 LRHLFFAER---EAPRVTGGGSAGR-IGRVGILGAGTMGGGIAMAYANAGYDVTLYEREQ 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G+  I  N      +GKL        +  +   LD  +    D+VIEAV E + +
Sbjct: 334 AALDRGMSLIRKNYEITAAKGKLDAAGVEARMARIAPSLDMQDLAQADLVIEAVFEDMAV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F +L+  C P  ILATNTS ++++ +   T+  + +IG HFFSPA+VM LLE+VR 
Sbjct: 394 KQAVFRQLDAVCKPGAILATNTSRLNIDEIATCTARPEAVIGLHFFSPANVMKLLEVVRG 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            RT A VI   M V + I K+PV+VG C GF  NR    Y + A  L+  G    +ID A
Sbjct: 454 ARTGADVIATCMAVAQQIGKIPVLVGVCEGFVGNRMLTGYWREAGFLLEEGASPQQIDGA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+ +GP  + DLAG  +  AT K      P     S + D + + GR G+    G 
Sbjct: 514 LTRFGMAMGPLAMADLAGMDINWATRKRLAPTRPAHLRYSKVADRICELGRFGQKTQAGY 573

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  IIE C R + I    +P+S  ++EIVE  +  + NE  R++E
Sbjct: 574 YRYEPGSRQPLPDPVVDGIIETCAREAGIAR--RPVS--DEEIVERCMLALANEGARIIE 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI  RASD+D   V G  FP  RGG +F+A  +G       +++  + +G  + P+  L
Sbjct: 630 EGIAQRASDVDVVYVHGYGFPGARGGPMFYAQTLGLAETLEKIRELQRAHGEHWTPAPLL 689

Query: 540 EERATKG 546
           E    +G
Sbjct: 690 ERLVKEG 696


>gi|456358170|dbj|BAM92615.1| 3-hydroxyacyl-CoA dehydrogenase [Agromonas oligotrophica S58]
          Length = 697

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 295/548 (53%), Gaps = 16/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ ++  E        +A  + A  +P  +      K+ +  
Sbjct: 152 MIVGGDPIGAAEALKSGLIEEII--EGPASGGEAFARKVLAENRPLRKLRDDESKIAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +K+  V + G K R V +VA+IG G MG GIA +     + V L E   
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKGRKVERVAIIGAGTMGGGIAMSFANAGVPVTLIETAE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+      D D++IEAV E++ +
Sbjct: 329 EQLRRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGLENVGDADLIIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + ++TS    ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQYAKPGAVLASNTSYLNIDDIAKQTSRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+T+   ++  +++ + I KVP VVG C GF  NR      + A  L+  G    ++D+ 
Sbjct: 449 EKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  +I+E   L+ +  G K  +V+++EI+E +++P++NE  ++L 
Sbjct: 562 YKYEAGSRAPLPDPDVERLIDET--LAKL--GLKRRAVSDEEILERMMYPMINEGAKILA 617

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           EGI  R SD+D   + G  +P YRGG ++WAD+VG  ++   L  +++   +   +P+  
Sbjct: 618 EGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKHIAERLAFYAKETNDPSLEPAPL 677

Query: 539 LEERATKG 546
           L++ A +G
Sbjct: 678 LKKLADEG 685


>gi|121596028|ref|YP_987924.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. JS42]
 gi|120608108|gb|ABM43848.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
           sp. JS42]
          Length = 705

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 161/447 (36%), Positives = 245/447 (54%), Gaps = 7/447 (1%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+ KE  +F E +     +GLVH FFA+R T+K+P        PR   K+A+IGGG MG+
Sbjct: 255 GIAKERALFVECLNSPQRQGLVHAFFAERETAKIPEAQ--AAAPRHFAKIAIIGGGTMGA 312

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI  A +   + V + E ++E + +G K +E    GL+ +G++T +     L        
Sbjct: 313 GITVAALDAGLTVTMIERDAESIARGQKNVEKVYDGLIAKGRMTAEGKAAILARYTPSTR 372

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y +  DVD+VIEAV E + +K+ +F EL++ C P  +LATNTS +D++ +   TS    +
Sbjct: 373 YDDIADVDLVIEAVFEDLEVKKAVFKELDRVCKPGAVLATNTSYLDIDAIAAVTSRPQDV 432

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG HFFSPA++M LLEIV   + +  V+     + K +KKVPV  G C GF  NR    Y
Sbjct: 433 IGLHFFSPANIMKLLEIVVPAKVAPDVVTTAFALAKKMKKVPVRAGVCDGFIGNRILAVY 492

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            Q+A  L+  G   + ID A+R FG  +GPFQ+ DLAG  +  AT K        ++   
Sbjct: 493 KQAADYLMEDGASPYEIDEAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPQARYV 552

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
            + D + + G  G+  G+G Y Y +G++  +PDP VL I++  R    I     P   T 
Sbjct: 553 EVADRVCERGWFGQKTGRGFYLYPQGARVGQPDPEVLAIVDAERAKKGIT----PRQFTA 608

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
            EI+   +  +VNE  +V++EGI +R  D+D   + G  FP +RGG + WAD  G + V 
Sbjct: 609 DEIMRRYMAAMVNEGAKVVQEGIALRPLDVDVTFLSGYGFPRWRGGPMKWADMTGLDKVL 668

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATKG 546
             ++ + +    F+KP+  LE+   +G
Sbjct: 669 ADIRAFEKEDPLFWKPAPLLEQLVAEG 695


>gi|395762316|ref|ZP_10442985.1| 3-hydroxyacyl-CoA dehydrogenase [Janthinobacterium lividum PAMC
           25724]
          Length = 695

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 191/552 (34%), Positives = 289/552 (52%), Gaps = 19/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGS 58
           M++    + SE+     L D V     +LL+ +  +A  +A  R  P +R   + D    
Sbjct: 152 MIVSGTPVASEKLAGTALFDEVTAPGADLLQAAVAFATKVADVRPLPTVRE-RKVD---- 206

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                  L+ +R   K  +   P    C+D +   +      G+  E ++F +LV    S
Sbjct: 207 YPNHAAFLQFSRNTVKAMSGPFPAPLKCVDAVAAAVTMTFDEGLQYERELFMQLVQSPVS 266

Query: 119 RGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L H FFA+R  SKVP+V +D  +  R +   A++G G MG+GIA       I V L E
Sbjct: 267 KALRHAFFAERLASKVPDVPSDTPV--RAIASAAIVGAGTMGAGIAMNFANAGIAVTLLE 324

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              E L KG+ TI  N    V +GKLTQ+KA   + ++ G L Y++    D+VIEAV E 
Sbjct: 325 TRQEALDKGLATIRKNYENTVKKGKLTQEKAEQRIALVSGTLAYADIAQADIVIEAVFEE 384

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ +F +L+    P  ILA+NTST+DL+ +   T     +IG HFFSPA+VM LLEI
Sbjct: 385 LAVKEAVFKQLDAVMKPGAILASNTSTLDLDKIAAFTQRPQDVIGTHFFSPANVMKLLEI 444

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR  +T   V+   + + K +KK  VV G C GF  NR    YS+ A  L+  G    ++
Sbjct: 445 VRGAQTGKDVLATALALSKKLKKTGVVSGVCDGFIGNRMIEQYSRQAGFLLEEGCLPEQV 504

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D A+  FG  +GPF++ DLAG  +  A  K      P  ++ S   DLL + GR G+  G
Sbjct: 505 DKAVEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVEKPAVTY-SKTADLLCELGRYGQKTG 563

Query: 418 KGLYTYEKGS-KPKPDPSV-LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
            G Y Y+ G  K  P   V   I++ C  +     G     V+++EIVE +++ +VNE  
Sbjct: 564 AGWYDYKAGDRKAYPSEQVNAMIVQHCADI-----GVARRKVSDQEIVERLVYALVNEGA 618

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFK 534
           R+LEEGI  RASD+D   + G  FP +RGG +F+AD +G   V  ++  +++  +G+ + 
Sbjct: 619 RILEEGIAQRASDIDMVYLTGYGFPLFRGGPMFYADTLGLPNVLDTIAAYAKGRHGDAWT 678

Query: 535 PSRFLEERATKG 546
           P+  L + A +G
Sbjct: 679 PAPLLLKLAGEG 690


>gi|421483297|ref|ZP_15930874.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
 gi|400198541|gb|EJO31500.1| 3-hydroxyacyl-CoA dehydrogenase [Achromobacter piechaudii HLE]
          Length = 707

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 184/551 (33%), Positives = 289/551 (52%), Gaps = 15/551 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K +++E   K GL+DA+   ++ L     +   + A      RS   TD L   +
Sbjct: 157 LMLSGKHLSAEAALKAGLVDALGDGDDALAAGLAYTRRLLAEGAGPRRSRDATDALADKA 216

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A      A  Q  KT   +      +D +   I      G+  E  +F + +      G
Sbjct: 217 AALAEASAAGEQVAKTLRGLYSPAKIVDAVRAAIEQPFDEGLRTERALFLQCLDSPQRAG 276

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R T+K+P +     +PR + K+ V+GGG MG+GIA + +   + VV+ E + 
Sbjct: 277 LVHAFFAERETAKIPELK--AARPRRLEKIGVVGGGTMGAGIAVSVLDAGLPVVMVEQDD 334

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +      L  +G++T D+ +  +    G   Y    D D++IEAV E + +
Sbjct: 335 AALERGRARVAQVYDLLQKKGRITADERDARMARFSGATTYDALGDADLIIEAVFEDMDV 394

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K  +F++L++   P  +LATNTS +D+N +   T     ++G HFFSPA++M LLEIV  
Sbjct: 395 KLAVFAQLDRVAKPGAVLATNTSYLDVNRIASATRGPADVLGLHFFSPANIMKLLEIVVG 454

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E TSA+ +     + + ++K PV  G C GF  NR    + Q+A +++  G   + ID+A
Sbjct: 455 EHTSAETVATGFELARRLRKTPVRAGVCDGFIGNRILAVHRQAADMMMEDGASPYDIDAA 514

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKE----FDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +R FG P+GP+Q+ DLAG  +  AT K      D A   R  Q P  D L + G  G+  
Sbjct: 515 VREFGYPMGPYQMADLAGGDIGWATRKRRAATRDPAL--RYVQIP--DRLCERGWFGQKT 570

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G+G Y Y  G++   PDP VL II+E RR +++ P  +P   T ++I    L  ++NE+ 
Sbjct: 571 GRGFYLYPDGARVGTPDPEVLAIIDEERRRASVTP--RPF--THEDIQRRYLAAMINEAA 626

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
            VL +GI +R SD+D   + G  FP YRGG + +AD+VG + V   ++ +++    F+KP
Sbjct: 627 NVLHQGIALRPSDVDVVFLSGYGFPRYRGGPLHYADSVGLDRVLADIRSYAEEDPAFWKP 686

Query: 536 SRFLEERATKG 546
           S  L + A  G
Sbjct: 687 SPLLVQLAESG 697


>gi|397733304|ref|ZP_10500023.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
 gi|396930876|gb|EJI98066.1| enoyl-CoA hydratase/isomerase family protein [Rhodococcus sp. JVH1]
          Length = 701

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 283/548 (51%), Gaps = 14/548 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI-AARRKPWIRSLHRTDKLGSL 59
           M+     ++     +LG+ DA    + L          +  +   P + SL   D  G  
Sbjct: 162 MIQQGTPVSGARAAELGIADACFDGDPLGAALDFLRTQVDTSTSGPVVDSLPPADATGID 221

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
            +A      AR   + +  N       +D +E        +G+  E   F  L+    S 
Sbjct: 222 FDA------ARRPVRPSTRNGLAQLTAIDAVETATRLPTAAGLAFERAAFLGLLRGPESA 275

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L HVFFA++   K+  V  +  +P  + +VAV+G G MGSGIA A     + V L E N
Sbjct: 276 ALRHVFFAEKTAPKLSGVPPVSARP--ISRVAVVGAGTMGSGIAMAFANGGLPVTLIEQN 333

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G   +        T+GKLT+ +A + + +++  LD     + D+V+EAV E + 
Sbjct: 334 QDALTRGTALVRKTYESSTTKGKLTETQARDRIALIEPNLDLDAAAEADLVVEAVFEDMA 393

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L+  C P  ILA+NTS +DL+ +   TS    +IG HFFSPA++M L+E+VR
Sbjct: 394 VKKEVFGKLDAVCKPGAILASNTSRLDLDEIARATSRPSDVIGLHFFSPANIMKLVEVVR 453

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E T+  V+   +T+ + I K+PV+   C GF  NR   PY + A  L+  G    +ID+
Sbjct: 454 GEATADDVVATGLTLAQQIGKIPVLSQVCEGFIGNRMLTPYRREAEFLLEEGATPQQIDA 513

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+++FG+ +GP  + DLAG  +A A  K      P       + D L ++GR G+ +G G
Sbjct: 514 ALQAFGMAMGPCAMSDLAGLDIAWAARKRLAPTRPKDVRYPRVADTLCENGRFGQKSGAG 573

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YEKGS+ P PDP+V  II  C     I    +  ++T++EI++  +  +VNE   +L
Sbjct: 574 YYRYEKGSRTPVPDPAVDEIIRTCAAEDGI----ERRTITDEEIIDRCVLALVNEGATLL 629

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
            EGI  RASD+D   V G  FP++RGG +++A+A+G +     ++ +  L+G  + P+  
Sbjct: 630 GEGIAQRASDIDVVYVDGYGFPAFRGGPMYYAEALGLDVTLQKIRDFENLHGRTWTPAPL 689

Query: 539 LEERATKG 546
           L +    G
Sbjct: 690 LAQLVDAG 697


>gi|386286798|ref|ZP_10063982.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
           proteobacterium BDW918]
 gi|385280180|gb|EIF44108.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [gamma
           proteobacterium BDW918]
          Length = 701

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 188/557 (33%), Positives = 303/557 (54%), Gaps = 23/557 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA---LDIAARRKPWIRSLHRTDKLG 57
           M+   K+I+++E  + GLID ++ +  L +    +A   +D  A+ +P       T  L 
Sbjct: 159 MISSGKAISADEALQCGLIDQIIAAS-LPESGIAYAKELIDNGAKVRP-------TSALI 210

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           +        +  +   K T    P +   L++IE       + G   E + F E      
Sbjct: 211 ASPVDEHFFENKKNSLKPTGILAPAY--ILELIELATKTDIHEGQRVERERFLECRSSAG 268

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           S  L H+F A+RA +K+P++    + PR + KVAVIG G MG GIA         V L E
Sbjct: 269 SAALRHIFLAERACTKLPDIAP-SVTPRPINKVAVIGAGTMGGGIAMCFASAGFPVTLIE 327

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              E L +G+  IEAN    V RG+L+QD+   A+  +K  L Y++  D D+VIEA  E+
Sbjct: 328 TAQENLNRGLDQIEANYNQSVKRGRLSQDQLAKAISNIKPSLQYADIADADLVIEATFEN 387

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ +FS+L + C P+CILATNTS +D+N + + T     +IGAHFFSPA++M LLE+
Sbjct: 388 MDVKKAVFSKLVEVCKPNCILATNTSYLDVNTIADVTGRPQDVIGAHFFSPANIMKLLEV 447

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VRT++T+ +V++ +M + K I KV V VG C GF  NR F  Y++ A+LL+  G    ++
Sbjct: 448 VRTQKTAPEVVMSVMVIAKRIGKVAVAVGVCHGFVGNRMFKAYARQAQLLLLEGCTPAQV 507

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGKAN 416
           D+ I+++G+ +GP  + DLAG  ++  + +  D+     S  +  L DLL++ GR G+ +
Sbjct: 508 DTVIQTWGMAMGPLAVGDLAGIDISYRSRR--DQGICSGSIAEFALPDLLVEMGRLGQKS 565

Query: 417 GKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G G Y YE  ++  K D SV  +I+       I        ++  EI++ +   ++NE  
Sbjct: 566 GSGYYNYEPETRARKNDQSVHDLIQSIANQWCITRR----EISNDEIIDRLSLALINEGA 621

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFK 534
            +L+EGI  R SD+D   V G  FP +RGG ++ AD +G + V   L+   +  G+  ++
Sbjct: 622 HILDEGIAARPSDIDVVYVNGYGFPRWRGGPMYLADKIGLDKVVRKLEILREQTGDTCWE 681

Query: 535 PSRFLEERATKGIPLSA 551
           P++ L + A     LS+
Sbjct: 682 PAKLLHKLAATSQTLSS 698


>gi|333915071|ref|YP_004488803.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
 gi|333745271|gb|AEF90448.1| 3-hydroxybutyryl-CoA epimerase [Delftia sp. Cs1-4]
          Length = 699

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 184/540 (34%), Positives = 284/540 (52%), Gaps = 19/540 (3%)

Query: 18  LIDAVVTS-EELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L D +  S E LL  ++ +AL++A +R  P +R L      G         + AR   K 
Sbjct: 172 LFDKMAASPESLLDEAKAFALEVADKRPLPRVRDLPCKHPQGD-----AYFQFARNMVKG 226

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A N P    C+D +E         G+  E   F +L+    SR L H+F A+RA SK+ 
Sbjct: 227 MAKNYPAPARCVDTVENAARKKFDEGMALERDAFMQLMWSPESRALRHLFMAERAASKIA 286

Query: 136 NV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 194
           +V +D  +  R ++ V VIG G MG GI+   +   I V + E   E L +G+ TI  N 
Sbjct: 287 DVPSDTAV--RDIKTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATIRKNY 344

Query: 195 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 254
              V +GKLTQ+K +  + +L   L Y   K+ D++IEAV E + +K+ +F +L++   P
Sbjct: 345 EAQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLIIEAVFEELGVKETVFKQLDEVAKP 404

Query: 255 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 314
             ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+  V+  +M +
Sbjct: 405 GAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKHTAKDVLATVMKL 464

Query: 315 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 374
            K IKK  VV G C GF  NR    YS+ A  L+  G    ++D AI  FG  +GPF++ 
Sbjct: 465 AKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPAQVDKAIEKFGFAMGPFRMG 524

Query: 375 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDP 433
           DLAG  +  A  K       D  + S   D L + GR G+  G G Y Y+ G +   P  
Sbjct: 525 DLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSE 583

Query: 434 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 493
            V  +IE  R+   I     P  ++++EIV+ ++F +VNE   +LE+GI  ++ D+D   
Sbjct: 584 LVNQMIESHRKELGIT----PRKISDEEIVQRLVFALVNEGAHILEDGIAGKSGDIDMVY 639

Query: 494 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 550
           + G  FP +RGG + +A  VG   V  ++ ++++      +F++P+  L + A +G   S
Sbjct: 640 LTGYGFPIWRGGPMHYAGEVGLFNVVQAMNRFAKNPNDDADFWQPAPLLAKLAAEGKQFS 699


>gi|374572763|ref|ZP_09645859.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
 gi|374421084|gb|EHR00617.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. WSM471]
          Length = 698

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 179/562 (31%), Positives = 294/562 (52%), Gaps = 18/562 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V  E        +   + A ++P  R      K+ +  
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPAAGGEAFVRKLLAEKRPLRRLRDDDSKIAAAR 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  SK+  V + G KPR V +VA++G G MG GIA +     + V L E   
Sbjct: 270 QRYAFFAEREASKIAGVPE-GTKPRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+      D D+VIEAV E++ +
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   ++  + + + I KVP VVG C GF  NR      + +  L+  G    ++D+ 
Sbjct: 449 DKTAPDALVTAVNIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSKPK-PDPSVLPIIEEC-RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE GS+   PDP V  +I+E   RL     G K   V++ EI+E +++P++NE  ++L
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETLLRL-----GRKKRVVSDDEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
           EEGI  R SD+D   + G  +P YRGG +FWAD VG  ++   L  +++   +   +P+ 
Sbjct: 617 EEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLSFYAKETNDPSLEPAP 676

Query: 538 FLEERATKGIPLSAPVSSSSTS 559
            L++ A +G   ++  + S  +
Sbjct: 677 LLKKLAAEGKTFASLAAGSKAA 698


>gi|384222108|ref|YP_005613274.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
 gi|354961007|dbj|BAL13686.1| hypothetical protein BJ6T_84430 [Bradyrhizobium japonicum USDA 6]
          Length = 698

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 179/549 (32%), Positives = 290/549 (52%), Gaps = 18/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V  E        +   + A ++P  R      KL +  
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLLAEKRPLRRLRDDDSKLAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  SK+  V + G K R V +VA++G G MG GIA +     + V L E   
Sbjct: 270 QRYAFFAEREASKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+      D D+VIEAV E++ +
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   ++  +T+ + I KVP VVG C GF  NR      + +  L+  G    ++D+ 
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSKPK-PDPSVLPIIEEC-RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE GS+   PDP V  +I+E   RL     G K   V+++EI+E +++P++NE  ++L
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETLLRL-----GRKKRVVSDEEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
           EEGI  R SD+D   + G  +P YRGG +FWAD VG  ++   L  +++   +   +P+ 
Sbjct: 617 EEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLSFYAKETNDPSLEPAP 676

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 677 LLKKLAAEG 685


>gi|91783541|ref|YP_558747.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia xenovorans LB400]
 gi|91687495|gb|ABE30695.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia xenovorans LB400]
          Length = 694

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 180/528 (34%), Positives = 281/528 (53%), Gaps = 13/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL D +   + L + +  +A  + A+  P  +     D+     
Sbjct: 152 MIVSGTPVMSEKLADSGLFDELAQGD-LAEAALAFARKVGAKEGPHPK---LRDRRIEHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A + P    C+D +E G+ +G   G+  E + F  LV    SR 
Sbjct: 208 NAAGFIQFARNSVAAVAKHFPAPHKCIDAVEAGVQNGFDKGLAFERECFIALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V +D  +  R + +VAVIG G MG GIA   I   I V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPSDTPV--RDINQVAVIGAGTMGGGIAMNFINAGIPVTLLETR 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKL  +     + ++   L Y + K+ D+++EAV E + 
Sbjct: 326 QEALDRGLATIRKNYEASVRKGKLKPEALEQRMALITPTLSYDDLKNADLIVEAVFEELD 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F  L++      ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQVFRRLDEVAKQGAILASNTSTLDVDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              T+  V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GRETAKDVLATVMKLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDR 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K   +  PD  + S + D L ++GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHY-SKIADRLCETGRFGQKTGGG 564

Query: 420 LYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y+ G +   P   V  +I    + +N   G + IS  ++EIVE ++F +VNE  ++L
Sbjct: 565 WYDYKAGDRTAYPSKVVDDMIVAFSKEAN--AGRRKIS--DEEIVERLVFSLVNEGAKIL 620

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           EEGI  +ASD+D   + G  FP YRGG + +AD VG   V  ++++++
Sbjct: 621 EEGIASKASDIDMVYLAGYGFPLYRGGPMLYADTVGLYNVERAIRRYA 668


>gi|449509561|ref|XP_004186281.1| PREDICTED: LOW QUALITY PROTEIN: peroxisomal bifunctional enzyme
           [Taeniopygia guttata]
          Length = 725

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 196/571 (34%), Positives = 285/571 (49%), Gaps = 34/571 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   K I + E  KLGL+D +V    +    RL    I     P   SL    +L ++ 
Sbjct: 150 MITTGKHIPATEALKLGLVDEIVEENTIEAAIRLANKVIGQPLGPRRLSLKPIPRLPNME 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                L+ A ++ KK A      + C   +          GV +E ++F+ L+    +R 
Sbjct: 210 A---FLREALVKVKKQARGCLAPELCFQAVRAAAERPFAEGVRRERELFQVLLTSGQARA 266

Query: 121 LVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           L + FFA+RA  +    +        P+ VRK AVIG G MG GI T+ +  NI +V  E
Sbjct: 267 LQYAFFAERAVRRWATPSGASWSSAAPQPVRKAAVIGLGTMGRGIVTSLVKANIPLVALE 326

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM-----LKGVLDYSEFKDVDMVIE 232
            + EYL KG K +      L+ R  +  ++   AL       L+  +D+     VD+VIE
Sbjct: 327 QDLEYLNKGRKAVML----LLEREAMKMERGAQALDFHNPARLQFTVDFDLLHHVDLVIE 382

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E++ LK++IF +L K C P  +L TNTS ++++ +   TS   ++IG HFFSPAHVM
Sbjct: 383 AVFENMALKKEIFHKLSKICKPGALLCTNTSALNIDEIASATSCPQQVIGTHFFSPAHVM 442

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLEI+    TS   I   M + K +KKV VVVGNC GF  NR  FPY Q A  L+  G 
Sbjct: 443 RLLEIIYGRHTSPTAIATAMQLAKALKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGS 502

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE-------FDKAFPDRSFQ----SP 401
               +D  +  FG  +GPF++ DLAG  V   + K+            P R       SP
Sbjct: 503 RPEAVDQVLEDFGFKLGPFRMSDLAGLDVGWRSRKDQGLTGPSLPAGTPARQRHGQRYSP 562

Query: 402 LVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
           L DLL + GR G+  GKG Y YE+  G   +PDP +   +   R   +I    K   + +
Sbjct: 563 LPDLLCEQGRFGQKTGKGWYQYERAGGRTARPDPWLHSFLSHYRDTHHI----KSRFIDQ 618

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EI+E  LF ++NE   +L EGI      LD   + G  +P +RGG +F+A  VG   V 
Sbjct: 619 EEILERCLFSLINEGFAILAEGIASGPEHLDVIYINGYGWPKHRGGPMFYASTVGLPRVL 678

Query: 520 TSLKKWSQLYGNF--FKPSRFLEERATKGIP 548
             L+K+S+++ +    +PS FL++    G P
Sbjct: 679 AKLQKYSEVHPDVPELRPSAFLKKLVAAGNP 709


>gi|374369155|ref|ZP_09627192.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
           OR16]
 gi|373099305|gb|EHP40389.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
           OR16]
          Length = 693

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 178/487 (36%), Positives = 263/487 (54%), Gaps = 9/487 (1%)

Query: 62  AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 121
           A   +  +R      A N P    C+D +   +     +G+  E + F  L+    SR L
Sbjct: 209 AEGFIAFSRNTVAAVAKNFPAPLKCVDAVAASL-KPFEAGLKAEREGFMYLITTPESRAL 267

Query: 122 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
            H FF +RA SK+P+V + G   R + K+AVIG G MG GI    +   I V++ E   E
Sbjct: 268 RHAFFGERAASKIPDVPE-GTPTRKLEKIAVIGAGTMGGGITMNFLNAGIPVIMLETKQE 326

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +G+ TI  N      +GKLTQ+K    + +L   L Y E KD DMVIEAV E + +K
Sbjct: 327 ALDRGVATIRKNYENSAKKGKLTQEKVEQRMGLLTTTLSYDEIKDADMVIEAVFEEMGVK 386

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           + +F +L++      ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR E
Sbjct: 387 EIVFKKLDEVMKQGAILASNTSTLDVNKIASFTKRPQDVVGMHFFSPANVMKLLEVVRGE 446

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
           +T   V+  +M V K IKK  VV G C GF  NR    YS+ A  L+  G    ++D A+
Sbjct: 447 KTGKDVLATVMQVAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGYLLDEGALPEQVDKAV 506

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
             FG  +GPF++ DLAG  +  A  K      P+  + S   DLL + GR G+  G G Y
Sbjct: 507 EKFGFAMGPFRMGDLAGNDIGWAIRKRRAIDKPEIQY-SKTADLLCELGRYGQKTGAGWY 565

Query: 422 TYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
            Y+ G  K  P+  V  +I +  +   I        ++++EIVE ++F +VNE  ++LEE
Sbjct: 566 DYKAGDRKAYPNQQVNDMIVQHSKDLGIT----RRKISDEEIVERLVFALVNEGAKILEE 621

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFL 539
           GI  +ASD+D   + G  FP +RGG + +AD VG   V  S+ ++++ Y G  ++ +  L
Sbjct: 622 GIASKASDIDMVYLTGYGFPLFRGGPMLYADQVGLFNVAQSMARYAKGYHGEAWQAAPLL 681

Query: 540 EERATKG 546
            + A +G
Sbjct: 682 VKLAAEG 688


>gi|209517039|ref|ZP_03265887.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
 gi|209502570|gb|EEA02578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
          Length = 696

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 169/463 (36%), Positives = 253/463 (54%), Gaps = 9/463 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           ++ AR      A + P    C+D +E G+  G   G+  E + F  LV    SR L H F
Sbjct: 215 IQFARNSVAAIAKDFPAPHKCIDAVEAGVKDGFDKGLAFERECFVALVQTPESRALRHAF 274

Query: 126 FAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           F +RA SK+P+V +D  +  R +  VAVIG G MG GIA   +   I V L E   E L 
Sbjct: 275 FGERAASKIPDVPSDTPV--RDINHVAVIGAGTMGGGIAMNFLNAGIPVTLLETKQEALD 332

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           +G+ TI  N    V +GKL  +     L +L   L Y + K  D+++EAV E + +K+++
Sbjct: 333 RGLATIRKNYEATVKKGKLKPEVMEQRLALLTPTLSYDDLKQADLIVEAVFEELGVKEQV 392

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F  L++   P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+
Sbjct: 393 FRRLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKETA 452

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
             V+  +M + K IKK  VV G C GF  NR    Y + A  ++  G    ++D AI  F
Sbjct: 453 KDVLATVMKLAKKIKKTAVVSGVCDGFIGNRMIEQYVRQALFMLEEGALPAQVDKAIEKF 512

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 424
           G  +GPF++ DLAG  +  A  K      PD  + S + D L + GR G+  G G Y Y+
Sbjct: 513 GFAMGPFRMSDLAGNDIGWAIRKRRYLERPDMLY-SKIADRLCEMGRFGQKTGGGWYDYK 571

Query: 425 KGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIV 483
            G +   P   V  +I E  + +N     +   ++++EIVE ++F +VNE  ++LEEGI 
Sbjct: 572 AGDRTAYPSSVVNEMISEYSKETN----SERRKISDEEIVERLVFALVNEGAKILEEGIA 627

Query: 484 VRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
            +ASD+D   + G  FP YRGG + +AD VG   V  ++++++
Sbjct: 628 SKASDIDMVYLTGYGFPLYRGGPMLYADTVGLYNVERAIRRYA 670


>gi|146338085|ref|YP_001203133.1| enoyl-CoA hydratase [Bradyrhizobium sp. ORS 278]
 gi|146190891|emb|CAL74896.1| Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium
           sp. ORS 278]
          Length = 697

 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 179/549 (32%), Positives = 295/549 (53%), Gaps = 18/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD-KLGSL 59
           M++    I + E  K GLI+ +V       V   +A  + A  +P +R L   D K+ + 
Sbjct: 152 MIVGGDPIGAAEAHKSGLIEEIVEGPASGGVE--FARKVVAENRP-LRKLRDDDSKIAAA 208

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
              R +   A     K +  +    A  D +   I      G+ +E + F +L+  D S+
Sbjct: 209 KADRSIFTNAVAAITKKSRGLEAPFAAADAVGYAIDLPFDEGLKREREGFLKLLTSDQSK 268

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              + FFA+R  +K+  V + G K R + +VA+IG G MG GIA +     I V L E  
Sbjct: 269 AQRYAFFAEREAAKIAGVPE-GTKGRKIERVAIIGAGTMGGGIAMSFANAGIPVTLIETA 327

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+  ++ N      RG +  D     + ++ G +     KD D+VIEAV E++ 
Sbjct: 328 EEQLKRGMGIMQKNWEATAARGGIPADAPAKRMALIDGKVGLENVKDADLVIEAVFETMA 387

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  +LA+NTS ++++ +  +TS    ++G HFFSPA+VM L EIVR
Sbjct: 388 VKKEVFGKLDQYAKPGAVLASNTSYLNIDAIAAETSRPQDVLGMHFFSPANVMKLCEIVR 447

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+T+   ++  +++ + I KVP VVG C GF  NR      + A  L+  G    ++D+
Sbjct: 448 AEKTAPDALVTAVSIARKIAKVPAVVGVCDGFVGNRMLAQRGKQAEKLLFEGALPQQVDA 507

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG
Sbjct: 508 VVTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKG 560

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE GS+ P PDP V  +I+E   L+ +  G K  +V+++EI+E +++P++NE  ++L
Sbjct: 561 YYKYEAGSRAPLPDPDVEKLIDET--LAKL--GLKRRNVSDEEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
            EGI  R SD+D   + G  +P YRGG ++WAD+VG   +   L  +++   +   +P+ 
Sbjct: 617 AEGIAARPSDIDVVWLYGYGWPIYRGGPMYWADSVGLKQIAERLSYYAKETNDPSLEPAP 676

Query: 538 FLEERATKG 546
            L+  A +G
Sbjct: 677 LLKRLADEG 685


>gi|407937505|ref|YP_006853146.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
 gi|407895299|gb|AFU44508.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. KKS102]
          Length = 706

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 181/552 (32%), Positives = 282/552 (51%), Gaps = 19/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + ++   + GL+D +V   + L     +  ++ A + P    + RT  L +++
Sbjct: 158 LMLSGQPLKAQAALQAGLVDKLVEGTDPLAAGLAYVRELLAAQAP----VRRTRDL-AIA 212

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-----GVLKEAKVFKELVML 115
           E +  L     Q  +TA       + L +IE   V          G+ +E  +F E +  
Sbjct: 213 EPQAALAWLEEQKTETAKKSRGLFSPLKIIE--CVQAALQLPFDEGMARERALFMECLDS 270

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
               GL+H FFA+R   KVP       +PR V  +AVIGGG MG+GIA A +   + V +
Sbjct: 271 PQRAGLIHAFFAEREVVKVPEAQ--AAQPRPVASIAVIGGGTMGAGIAVAALDAGLPVTM 328

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E ++E + +G   +E     LV +G++T       +    G   Y++   VD+VIEAV 
Sbjct: 329 IERDAESIARGRANVEKVYNALVAKGRMTDAAKVAVMARYTGSTSYADIAQVDLVIEAVF 388

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +K+ +F EL++ C P  +LATNTS +D++ +   T     +IG HFFSPA++M LL
Sbjct: 389 EDIEVKKTVFRELDRVCKPGAVLATNTSYLDIDAIAAATGRPQDVIGLHFFSPANIMKLL 448

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EIV   + +  V+     + + +KKVPV  G C GF  NR    Y Q+A  L+  G   +
Sbjct: 449 EIVVPAKVAPDVVATAFELARKLKKVPVRAGVCDGFIGNRILAVYKQAADYLLEDGASPY 508

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
            ID+A+R FG  +GPFQ+ DLAG  +  AT K        ++    + D + + G  G+ 
Sbjct: 509 EIDAAVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPQARYVEIADRICERGWFGQK 568

Query: 416 NGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            G+G Y Y +GS+  +PDP VL I++  R    I     P S T  EI+   +  +VNE 
Sbjct: 569 TGRGFYLYPEGSRTGQPDPEVLAIVDAERAKKGI----SPRSFTADEIMRRYMAAMVNEG 624

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
             V+ EGI +R  D+D   V G  FP +RGG + WAD  G   V   ++ +++    F+K
Sbjct: 625 ANVVHEGIALRPLDVDVTFVAGYGFPRHRGGPMKWADMTGLPKVLADIEAFAKEDPLFWK 684

Query: 535 PSRFLEERATKG 546
           PS  L +   +G
Sbjct: 685 PSPLLVQLVREG 696


>gi|296136057|ref|YP_003643299.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
           intermedia K12]
 gi|295796179|gb|ADG30969.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Thiomonas
           intermedia K12]
          Length = 697

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/494 (34%), Positives = 266/494 (53%), Gaps = 13/494 (2%)

Query: 62  AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 121
           A   ++  R       P+ P    C++ +  G +     G+L+E  +F  L+    S+ L
Sbjct: 210 AEAFIQFTRTTVAAQFPHEPARLQCVEAVA-GSLKPFNEGMLRERSLFAMLMATPESQAL 268

Query: 122 VHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
            H FFA+RA SK+ +V  D   +P  + +V VIG G MG GI+   +     V L E   
Sbjct: 269 RHAFFAERAASKIGDVPADTPTRP--IARVGVIGAGTMGGGISMNFLNAGFPVTLVETTQ 326

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI  N      +GKL  ++ +  + +L+  LD+++  D D+VIEAV E++ +
Sbjct: 327 EALDRGVATIHKNYDNSAKKGKLKPEQVDKRMALLRPTLDFAQLADCDLVIEAVFETMEV 386

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F  L+    P  ILA+NTST+DL+ +   T     +IG HFFSPA+VM LLE+VR 
Sbjct: 387 KRDVFERLDAIAKPGAILASNTSTLDLDAIAAYTKRPQDVIGMHFFSPANVMKLLEVVRG 446

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+   +  +M + K I+K  VV G C GF  NR    Y + A  LV  G    ++D A
Sbjct: 447 KATAKDALATVMKLAKTIRKTAVVSGVCDGFIGNRMIEHYGRMANFLVEEGASPQQVDRA 506

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           + ++G+ +GPF++ DLAG  +  A  K      P+  + S L D L + GR G+  GKG 
Sbjct: 507 LEAWGMAMGPFRMGDLAGNDIGWAIRKRRYVEKPNVMY-SRLADRLCEQGRYGQKTGKGW 565

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE G++   PDP V  +I   R+   +     P  + + EIV+  L+ +VNE  R+L 
Sbjct: 566 YRYEAGNRAALPDPEVDALITAYRQEIGV----TPRKIDDAEIVDRCLYALVNEGARLLA 621

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPS 536
           EGI  RASD+D   + G  FP++RGG + +AD +G   V   +++++   G    F++P+
Sbjct: 622 EGIAQRASDIDMVYLAGYGFPAWRGGPMGYADQIGLAMVVRRMRQFAAQPGGDAAFWQPA 681

Query: 537 RFLEERATKGIPLS 550
             L E A +G   S
Sbjct: 682 PLLAELAEQGKTFS 695


>gi|418531196|ref|ZP_13097113.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           ATCC 11996]
 gi|371451698|gb|EHN64733.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           ATCC 11996]
          Length = 699

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 176/510 (34%), Positives = 273/510 (53%), Gaps = 13/510 (2%)

Query: 47  IRSLHRTDKLGSLSEAREV-LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 105
           +R L R   L       E   + A    +  + N P    CL+ ++         G++ E
Sbjct: 197 VRPLPRVRDLSCKHPQGEAYFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDDGMVAE 256

Query: 106 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP-RGVRKVAVIGGGLMGSGIAT 164
            + F +L+M   SR L H+F A+RA SK+P+V   G  P R +R V VIG G MG GI+ 
Sbjct: 257 REAFMQLMMTPESRSLRHLFMAERAASKIPDVP--GDTPVREIRTVGVIGAGTMGGGISM 314

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
             +   I V + E   E L +G+ TI  N    V +GKL++ K    + +L   L+Y + 
Sbjct: 315 NFLNAGIPVTILETKQEALDRGVATIRKNYEAQVKKGKLSEQKYEQRMGLLSTTLNYGDL 374

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
           K+ D++IEAV E + +K+++F +L++   P  ILA+NTST+D++ +   T     ++G H
Sbjct: 375 KNADLIIEAVFEELGVKEQVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMH 434

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSA 344
           FFSPA+VM LLE+VR + T+  V+  +M VGK IKK  VV G C GF  NR    YS+ A
Sbjct: 435 FFSPANVMKLLEVVRGKATAKDVLATVMKVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQA 494

Query: 345 RLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVD 404
             L+  G    ++D AI  FG  +GPF++ DLAG  +  A  K      PD  + S   D
Sbjct: 495 GFLLDEGASPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPDMKY-SASAD 553

Query: 405 LLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 463
            L + GR G+  G G Y Y  G +   P   V  +I+E R+   I     P  ++++EIV
Sbjct: 554 RLCELGRFGQKTGAGWYDYVPGKRDAIPSEVVAKMIDEHRKSLGIT----PRKISDEEIV 609

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
           + +++ +VNE   +LE+GI  ++ D+D   + G  FP +RGG + +A  VG   V  ++ 
Sbjct: 610 QRLVYALVNEGAHILEDGIASKSGDIDMVYLTGYGFPLWRGGPMHYAGEVGLFNVVQAMG 669

Query: 524 KWSQLYGN---FFKPSRFLEERATKGIPLS 550
           +++Q   +   F++P+  L + A +G   S
Sbjct: 670 RFAQNPNDDAKFWQPAPLLAKLAAEGKQFS 699


>gi|399991624|ref|YP_006571864.1| fatty acid oxidation complex subunit alpha [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
 gi|398656179|gb|AFO90145.1| putative fatty acid oxidation complex subunit alpha [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
          Length = 697

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 161/449 (35%), Positives = 251/449 (55%), Gaps = 8/449 (1%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            GV +E ++F +L+  D  +GL+H FF++RA SK+P + D+   PR V  + VIGGG MG
Sbjct: 244 DGVRQERELFMKLMESDQRQGLIHAFFSERAVSKLPELVDV--FPRDVAAMGVIGGGTMG 301

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGV 218
           +GIATA +L  + VVL E +    +   + IE N+RG + RGK++Q + +  L + LK  
Sbjct: 302 AGIATAALLAGLSVVLIERDEAASVAARERIEGNLRGALKRGKISQSQFDAILNETLKLA 361

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
            DY+    VD+V+EAV E + +K+ +F+ L++ C P  ILA+NTS +D+N +   TS   
Sbjct: 362 TDYAALSQVDLVVEAVFEDMDVKRDVFAALDEHCKPGAILASNTSYLDINDIAAATSRPS 421

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
            +IG HFFSPAHVM LLE+V  ++T+  V+     +GK +KK  V  G C GF  NR   
Sbjct: 422 DVIGLHFFSPAHVMKLLEVVVADQTAPDVVATGFALGKRLKKTSVRSGVCDGFIGNRIMN 481

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
            Y ++A  +V  G   ++ID  +  FG  +GPF + DLAG  +  A  K        R  
Sbjct: 482 SYRKAADYMVLDGASPYQIDKVMTGFGFAMGPFAVADLAGLDIGWAARKRRAPTLDPRER 541

Query: 399 QSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISV 457
                D+L + G  G+  G+G Y YE+G +   P+P V   IE  +R   + P       
Sbjct: 542 VVHFSDMLCEGGDFGQKTGRGFYVYEEGKRGGTPNPQVAEYIERDQRDQGVTPQ----IF 597

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
              E++   +  +VNE+ +V+ EGI  R  D+D   + G  FP + GG + WAD  G + 
Sbjct: 598 ANDEVLRRYMCAMVNEAAKVVGEGIARRPLDVDMVLLFGYGFPRFWGGPLKWADLQGPDS 657

Query: 518 VYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           +   ++++++    F++P+  LE+   +G
Sbjct: 658 ILKDIRRYAKEDAFFWQPAPLLEQMVAEG 686


>gi|295677036|ref|YP_003605560.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1002]
 gi|295436879|gb|ADG16049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1002]
          Length = 706

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 285/547 (52%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  +  +++E   LGLID +  S ++L     +A ++ A   P +R       L   +
Sbjct: 157 LILSGRHASAKEALALGLIDRLGASGDILAEGLAYAHELLAAHAP-VRRTRDAAALNDRA 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +   +  AR +  K A  +      +D +E  I      G+  E K+F + +      G
Sbjct: 216 ASLAAVAKARDETAKKARGLFSPLKIVDAVEAAIEQPFDEGLKFERKLFLQCLDSPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R   K P   D   KPR +  + VIGGG MG+GIA A +   + V + E + 
Sbjct: 276 LVHAFFAEREVLKAPETRDA--KPRQLEAIGVIGGGTMGAGIAIAVLDAGLPVTMIERDE 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   I+    GL+ +G+LT DK    +    G   Y      D+VIEAV E + +
Sbjct: 334 ASLARGRAHIDKVYDGLIAKGRLTADKKAATMARWSGSTSYDALAHADLVIEAVFEDLDV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL++ C P  +LATNTS +D+  +    S    +IG HFFSPA++M LLE+V  
Sbjct: 394 KKAVFAELDRVCKPGAVLATNTSYLDIEAIAASISRPADVIGLHFFSPANIMKLLEVVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++ SA V+     + K ++K PV  G C GF  NR    Y  +A  L+  G   ++ID+A
Sbjct: 454 KQVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRLLAVYRAAADALMEDGASPYQIDAA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R+FGLP+GPFQ++DLAG  +  A  K         +    + D L + G  G+  G+G 
Sbjct: 514 VRAFGLPMGPFQVVDLAGGDIGWAARKRRAATRDPNARYVQIADRLCERGWFGQKTGRGF 573

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +GS+    DP V  II+  R+ + I     P S T+++I+   +  ++NE   V+ 
Sbjct: 574 YLYPEGSRGGMTDPEVEAIIDAERKRAGIT----PRSFTDEQIMRRYMAAMINEGANVVH 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI +R  D+D   + G  FP YRGG + +AD+VG   +   ++++++    F++PS  L
Sbjct: 630 EGIALRPLDVDVTLLYGYGFPRYRGGPMKYADSVGLATILADIREFAKEDPLFWRPSPLL 689

Query: 540 EERATKG 546
            E   +G
Sbjct: 690 VELVERG 696


>gi|377820680|ref|YP_004977051.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia sp. YI23]
 gi|357935515|gb|AET89074.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia sp. YI23]
          Length = 694

 Score =  291 bits (746), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 170/485 (35%), Positives = 259/485 (53%), Gaps = 8/485 (1%)

Query: 62  AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 121
           A   ++ AR      A + P    C+D IE+G+  G   G+  E + F  LV    SR L
Sbjct: 209 AEGFIQFARNGVAAAAKHFPAPHKCIDAIEKGVKEGFERGLAFERECFLSLVQTPESRAL 268

Query: 122 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
            H FF +RA  K+ +V   G   R + +V V+G G MG GIA   +     V L E   E
Sbjct: 269 RHAFFGERAAGKIADVPP-GTPVRTIARVGVVGAGTMGGGIAMTFLNAGFPVTLLETKQE 327

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +G+ TI  +      +GKLT+++A   + ++   L Y +  D D++IEAV E + +K
Sbjct: 328 ALDRGLATIRGHYEAQAAKGKLTREQAEARMALITPTLVYGDLADADLIIEAVFEDLSVK 387

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           + +F +L++   P  +LA+NTST+DLN +   T     +IG HFFSPA+VM LLE+VR E
Sbjct: 388 ESVFRQLDQCAKPGAVLASNTSTLDLNRIASFTQRPGDVIGMHFFSPANVMKLLEVVRGE 447

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
           +T   V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID AI
Sbjct: 448 KTGKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDRAI 507

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
             FG  +GPF++ DLAG  +  A  K   +  P   + S + D L ++GR G+  G G Y
Sbjct: 508 EKFGFAMGPFRMSDLAGNDIGWAIRKRRYREQPALHY-SGIADTLCEAGRFGQKTGAGWY 566

Query: 422 TYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
            Y+ G +   P  +V  +I        I        + ++EIVE ++  +VNE  ++LEE
Sbjct: 567 DYQAGKREALPSQAVDAMIVAYSNERGI----ARRRIGDEEIVERLVLALVNEGAKILEE 622

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS-QLYGNFFKPSRFL 539
           GI  +ASD+D   + G  FP +RGG + +AD +G   V  ++++++ Q  G  ++PS  +
Sbjct: 623 GIAAKASDIDMVYLTGYGFPLWRGGPMLYADTIGLYNVERAIRQYAKQANGEAWQPSARV 682

Query: 540 EERAT 544
            E AT
Sbjct: 683 TELAT 687


>gi|398809677|ref|ZP_10568520.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
 gi|398085084|gb|EJL75749.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
          Length = 702

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 176/529 (33%), Positives = 280/529 (52%), Gaps = 15/529 (2%)

Query: 26  EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA 85
           +E +  +R  A    A   P +R+L      G         + A+      + N P    
Sbjct: 185 DEAVAFARSVAGKTGADALPLVRNLPCKHPQGD-----AYFQFAKNMVGGMSKNYPAPLQ 239

Query: 86  CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR 145
           C+D ++        +G+ +E ++F  L+    S  L H+F A+RA SK+P+V +   K R
Sbjct: 240 CVDAVQAATKMKFDAGMAEERRIFTSLMFTPESLALRHLFMAERAASKIPDVPEDTPK-R 298

Query: 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ 205
            ++ V VIG G MG GI+   +   I V + E+  E L +G+ TI+ N    V +GKL Q
Sbjct: 299 EIKAVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQVKKGKLKQ 358

Query: 206 DKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 265
           DK    + +L   L Y + KD D++IEAV E + +K+K+F EL++      ILA+NTST+
Sbjct: 359 DKYEQRMALLSTTLSYDDLKDADLIIEAVFEEIGVKEKVFKELDRVAKKGAILASNTSTL 418

Query: 266 DLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV 325
           D++ +   T     ++G HFFSPA+VM LLE+VR + T+  V+  +M +GK IKK  VV 
Sbjct: 419 DVDKIASFTERPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIGKKIKKTSVVS 478

Query: 326 GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 385
           G C GF  NR    YS+ A  L+  G    ++D A+  FG  +GPF++ DLAG  +  A 
Sbjct: 479 GVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAVEKFGFAMGPFRMGDLAGNDIGWAI 538

Query: 386 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRR 444
            K       D  + S   D L + GR G+  G G Y Y+ G +   P   V  +IE+ R+
Sbjct: 539 RKRRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSELVNKMIEDHRK 597

Query: 445 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 504
              I     P  ++++EIV+ ++F +VNE   +LE+GI  ++ D+D   + G  FP +RG
Sbjct: 598 ELGIT----PRKISDEEIVQRLVFALVNEGAHILEDGIASKSGDIDMVYLTGYGFPIWRG 653

Query: 505 GIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 550
           G + +A  VG   V  ++K++++     G F++P+  +++   +G   S
Sbjct: 654 GPMHYASQVGLYNVAETMKRFAKNPRDDGEFWQPAPLIQKLVAEGKQFS 702


>gi|221066315|ref|ZP_03542420.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           KF-1]
 gi|220711338|gb|EED66706.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           KF-1]
          Length = 699

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 175/515 (33%), Positives = 275/515 (53%), Gaps = 17/515 (3%)

Query: 41  ARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS 100
           AR  P +R L      G         + A    +  + N P    CL+ ++         
Sbjct: 197 ARPLPRVRDLSCKHPQGE-----AYFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDD 251

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP-RGVRKVAVIGGGLMG 159
           G++ E + F +L+M   SR L H+F A+RA SK+P+V   G  P R +R V VIG G MG
Sbjct: 252 GMMAEREAFMQLMMTPESRSLRHLFMAERAASKIPDVP--GDTPVREIRTVGVIGAGTMG 309

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
            GI+   +   I V + E   E L +G+ TI  N    V +GKL++ K    + +L   L
Sbjct: 310 GGISMNFLNAGIPVTILETKQEALDRGVATIRKNYEAQVRKGKLSEQKYEQRMSLLSTTL 369

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           +Y + K+ D++IEAV E + +K+++F +L++   P  ILA+NTST+D++ +   T     
Sbjct: 370 NYGDLKNADLIIEAVFEELGVKEQVFKQLDEVARPGAILASNTSTLDVDKIAAFTKRPQD 429

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA+VM LLE+VR + T+  V+  +M V K IKK  VV G C GF  NR    
Sbjct: 430 VVGMHFFSPANVMKLLEVVRGKATAKDVLATVMKVAKKIKKTAVVSGVCDGFIGNRMIEQ 489

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
           YS+ A  L+  G    ++D AI  FG  +GPF++ DLAG  +  A  K      PD  + 
Sbjct: 490 YSRQAGFLLDEGASPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRHVEQPDMKY- 548

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVT 458
           S   D L + GR G+  G G Y Y  G++   P   V  +I+E R+   +     P  ++
Sbjct: 549 SASADRLCELGRFGQKTGAGWYDYVPGNRDAIPSEVVAKMIDEHRKSLGL----TPRKIS 604

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           ++EIV+ +++ +VNE  ++LE+GI  ++ D+D   + G  FP +RGG + +A  VG   V
Sbjct: 605 DEEIVQRLVYALVNEGAQILEDGIASKSGDIDMVYLTGYGFPLWRGGPMHYAGEVGLFNV 664

Query: 519 YTSLKKWSQLYGN---FFKPSRFLEERATKGIPLS 550
             ++ +++Q   +   F++P+  L + A +G   S
Sbjct: 665 VQAMGRFAQNPNDDAKFWQPAPLLAKLAAEGKQFS 699


>gi|84500553|ref|ZP_00998802.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Oceanicola batsensis HTCC2597]
 gi|84391506|gb|EAQ03838.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Oceanicola batsensis HTCC2597]
          Length = 699

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 183/546 (33%), Positives = 293/546 (53%), Gaps = 20/546 (3%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 64
            + +  EEG + G ID VV + +  +++     ++ A   P      RTD+L + ++   
Sbjct: 162 GRHVPVEEGVEKGAIDRVVEAGDPREIAIAMGQEVVAGTLPT----RRTDQLQAQADDAA 217

Query: 65  VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR--GLV 122
           V +   +  KK  P++     C+  I          G+  E + F  LV +++ +  GL+
Sbjct: 218 VQQTLEMVQKKN-PHLINLAECVKAIAAS-TKPIDEGLAAEREHF--LVCMNSPQRSGLI 273

Query: 123 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           H FF +RA S +P       + R + K+ VIGGG MGSGI T+ ++  I V L EV  E 
Sbjct: 274 HAFFGERAVSNIPEAKG---ETRSLDKIGVIGGGTMGSGITTSCLMAGIPVRLIEVQQEG 330

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L +G+ TI  N+ G ++RGK+T DK + AL ML+  L+  +  DVD+VIEAV E + +K+
Sbjct: 331 LDRGVATITKNLDGALSRGKMTSDKRDAALAMLEPSLNMEDLSDVDLVIEAVFEKMEIKK 390

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
            IF +L   C P  ILA+NTS +D++ +   T     ++G HFFSPAHVM LLEIV+ E+
Sbjct: 391 DIFGKLNTICKPGAILASNTSYLDIDKIAATTDRPQDVLGLHFFSPAHVMRLLEIVQGEK 450

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           T+   +     + K +KKV V+   C GF  NR    Y +    LV  G     +D+A+ 
Sbjct: 451 TAPDALATGFALAKKLKKVGVLAQVCDGFIGNRILGHYGKVISYLVLDGASPAEVDTALE 510

Query: 363 SFGLPIGPFQLLDLAGYGVAAAT-SKEFDKAFP-DRSFQSPLVDLLLKSGRNGKANGKGL 420
           +FG+ +GP ++ DLAG  +   T  +  ++  P D  +   + D + +    G+  GKG 
Sbjct: 511 NFGMAMGPHKVGDLAGLDIGYMTRQRRKEEGLPADERYGGDIADRICEREGYGRKTGKGY 570

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y YE G+ P P+P+V  II+E R    I P       TE+EIV+  +   ++E+ RV+E+
Sbjct: 571 YLYETGA-PVPNPAVDEIIDEVRAEKGITPK----EFTEQEIVDRYMTAFISEATRVVED 625

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           G   R  D+D   + G  FP +RGG + +AD +GA  +   ++++++   N+++    L 
Sbjct: 626 GTAKRPIDVDMVFLFGYGFPRFRGGPLHYADTIGAAELVRRIEEYAKEDPNYWQVPPLLR 685

Query: 541 ERATKG 546
           + A  G
Sbjct: 686 KMADDG 691


>gi|398822432|ref|ZP_10580812.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
 gi|398226887|gb|EJN13129.1| 3-hydroxyacyl-CoA dehydrogenase [Bradyrhizobium sp. YR681]
          Length = 698

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 178/549 (32%), Positives = 289/549 (52%), Gaps = 18/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V  E        +   + A ++P  R      K+ +  
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLIAEKRPLRRLRDDDSKIAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVAAMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +K+  V + G K R V +VA++G G MG GIA +     + V L E   
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGVPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+      D D+VIEAV E++ +
Sbjct: 329 EQLKRGMGIMQKNWEATAARGGIPADAPAKRMALINGVVGIENVGDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   ++  +T+ + I KVP VVG C GF  NR      + +  L+  G    ++D+ 
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSKPK-PDPSVLPIIEEC-RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE GS+   PDP V  +I+E   RL     G K   VT+ EI+E +++P++NE  ++L
Sbjct: 562 YKYEAGSRSALPDPEVEKLIDETLLRL-----GRKKRVVTDDEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
           EEGI  R SD+D   + G  +P YRGG +FWAD VG  ++   L  +++   +   +P+ 
Sbjct: 617 EEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLAFYAKETNDPSLEPAP 676

Query: 538 FLEERATKG 546
            L++ A +G
Sbjct: 677 LLKKLAAEG 685


>gi|221199900|ref|ZP_03572943.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
           multivorans CGD2M]
 gi|221207431|ref|ZP_03580440.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
           multivorans CGD2]
 gi|221172634|gb|EEE05072.1| 3-hydroxyacyl-CoA dehydrogenase, C- domain family [Burkholderia
           multivorans CGD2]
 gi|221180139|gb|EEE12543.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
           multivorans CGD2M]
          Length = 710

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 283/547 (51%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++E+   LGL+D +  S++ L     +A ++ +   P  R+      L   +
Sbjct: 161 LMLTGRHASAEDALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRT-RDAQALADRA 219

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAG 279

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +KVP       +P  + ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 280 LVHAFFAEREAAKVPEARRGTARP--IERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E     LV +G++T    +  +  LKG   Y     VD+VIEAV E + +
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTPAAQSARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + +++KK+PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 458 ARASADVVATAFALARLLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+  G+G 
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+E+ R    I+    P + T+ EI+   L  ++NE   V+ 
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV----PRAFTDDEILRRYLAAMINEGANVVH 633

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ +++    F+KPS  L
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFAEEDPLFWKPSPLL 693

Query: 540 EERATKG 546
            E   +G
Sbjct: 694 VELVERG 700


>gi|107023812|ref|YP_622139.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
 gi|105894001|gb|ABF77166.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia AU 1054]
          Length = 708

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 276/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +A ++ +   P +R       L   +
Sbjct: 159 LMLTGRHASAEEALALGLVDRIAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 218 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKLERSLFLQCLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P        PR V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 278 LVHAFFAEREAAKAPEARRA--NPRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L  LKG   Y      D+VIEAV E + +
Sbjct: 336 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARLKGSTSYDALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++++         +IG HFFSPA+VM LLEIV  
Sbjct: 396 KQAVFAELARVCKPGAVLATNTSYLDIDVLAASIDRPADVIGLHFFSPANVMKLLEIVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R S  V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 456 ARVSPDVVATAFALAKQLKKTPVRAGVCDGFIGNRVLAVYRTAADYLMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K         +    + D L + G  G+  G+G 
Sbjct: 516 VRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ E R    I     P + T+ EI+   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIVAEERAKKGIT----PRTFTDDEILRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ +++    F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLYGYGFPRYRGGPMHYADTVGLANVLADIRAFAKEDPLFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|372278580|ref|ZP_09514616.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Oceanicola sp. S124]
          Length = 697

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 190/553 (34%), Positives = 291/553 (52%), Gaps = 28/553 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M L  + ++ EE    G ID VV       V+   A ++ A   P  R+   T ++   +
Sbjct: 157 MSLSGRQVSVEEAQAAGAIDRVVEGAPR-DVALAMAQEVVAGTLPTRRTSEITIEIDHTA 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVI---EEGIVHGGYSGVLK-EAKVFKELVMLD 116
                L   R   +K +P++     C+D I   ++ I  G     LK E + F + +   
Sbjct: 216 -----LDGIRAATQKKSPHLVNPLKCIDAIAAADQPIAEG-----LKVERQCFLDCMETP 265

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
              GL+H FF +RA S +P       + R ++ V VIGGG MGSGIATA +L  + V L 
Sbjct: 266 QRAGLIHAFFGERAVSSIPEAKG---ETRDIQSVGVIGGGTMGSGIATACLLAGLPVTLV 322

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           EV  E L +G+ TI  N+ G V+RGK++  K + AL  L   L      DVD+VIEAV E
Sbjct: 323 EVAQEGLDRGVATITKNLEGAVSRGKMSAAKKDAALTSLTPALQLDALADVDLVIEAVFE 382

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +K++IF +L+  C P  +LA+NTS +D+N +   TS    ++G HFFSPAHVM LLE
Sbjct: 383 DMGVKREIFGKLDAICKPGAVLASNTSYLDVNEIASCTSRPGDVLGLHFFSPAHVMRLLE 442

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           IV+ E+T+  V+     + K +KKV V+   C GF  NR    Y+  +  LV  G    +
Sbjct: 443 IVQGEQTAPDVLATGFALAKRLKKVGVLAQVCDGFIGNRILAHYALCSGYLVLDGASPAQ 502

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF---PDRSFQSPLVDLLLKSGRNG 413
           +D+A+  FG  +GP ++ DLAG  +   T K   KA    P   +   + D + ++G  G
Sbjct: 503 VDAALEGFGFAMGPHKVGDLAGLDIGWMTRKR--KAATRDPAERYAGQIPDRICENGWFG 560

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           +  GKG Y YE G+ P P+P V  II+E R    I P     + T+ EIVE  +  +++E
Sbjct: 561 RKAGKGYYLYEGGA-PVPNPEVATIIDEVRAEQGITPK----TFTDDEIVERYMTAMISE 615

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + RV+E+G   R  D+D   + G  FP +RGG + +AD +GA  +   ++++++   +++
Sbjct: 616 AARVVEDGTAKRPLDVDMVFLFGYGFPRFRGGPLHYADTLGAAELVARIERYAEEDPHYW 675

Query: 534 KPSRFLEERATKG 546
           +    L   A  G
Sbjct: 676 QVPDILRRMAADG 688


>gi|383769235|ref|YP_005448298.1| fatty oxidation complex alpha subunit [Bradyrhizobium sp. S23321]
 gi|381357356|dbj|BAL74186.1| probable fatty oxidation complex alpha subunit [Bradyrhizobium sp.
           S23321]
          Length = 698

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 180/562 (32%), Positives = 294/562 (52%), Gaps = 18/562 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  K GLI+ +V  E        +   + A ++P  R      KL +  
Sbjct: 152 MIVGGDPIGAAEALKNGLIEEIV--EGPASGGEAFVRKLLAEKRPLRRLRDDDSKLAAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K +  +    A  D +   I      G+ KE + F +LV  D S+ 
Sbjct: 210 ADRSIFTNAVASMTKKSRGLEAPFAAADAVGYAIDLPFDEGLKKEREGFLKLVASDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +K+  V + G K R V +VA++G G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKIAGVPE-GTKSRPVNRVAILGAGTMGGGIAMSFANAGIPVTLIETGE 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  ++ N      RG +  D     + ++ GV+      D D+VIEAV E++ +
Sbjct: 329 EQLKRGLGIMQKNWEATAARGGIPADAPAKRMALITGVVGIENVGDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++   P  +LA+NTS ++++ + + T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFGKLDQYVKPGAVLASNTSYLNIDEIAKSTKRPQDVLGMHFFSPANVMKLCEIVRA 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   ++  +T+ + I KVP VVG C GF  NR      + +  L+  G    ++D+ 
Sbjct: 449 DKTAPDALVTAVTIARKIAKVPAVVGVCDGFVGNRMLAQRGKQSEKLLFEGALPQQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSKPK-PDPSVLPIIEEC-RRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE GS+   PDP V  +I+E   RL     G K   V++ EI+E +++P++NE  ++L
Sbjct: 562 YKYEPGSRSALPDPEVEKLIDETLLRL-----GRKKRVVSDDEILERMMYPMINEGAKIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
           EEGI  R SD+D   + G  +P YRGG +FWAD VG  ++   L  +++   +   +P+ 
Sbjct: 617 EEGIAARPSDIDVVWLYGYGWPIYRGGPMFWADTVGLKHIADRLAFYAKETNDPSLEPAP 676

Query: 538 FLEERATKGIPLSAPVSSSSTS 559
            L++ A +G   ++  + S  +
Sbjct: 677 LLKKLAAEGKTFASLAAGSKAA 698


>gi|332525955|ref|ZP_08402096.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332109506|gb|EGJ10429.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 702

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 172/490 (35%), Positives = 265/490 (54%), Gaps = 10/490 (2%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
            + AR   K  A + P    C+D +E  +     +G+  E ++F  L+    S+ L H F
Sbjct: 219 FQFARNTVKAMARHFPAPAKCVDAVEAAVKRDIDAGLAYERELFMALMFTPESQALRHAF 278

Query: 126 FAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FA+RA SK+P+V  D  L  R + KV V+G G MG GI+   +   + V + E  +E L 
Sbjct: 279 FAERAASKIPDVPEDTPL--RRITKVGVVGAGTMGGGISMNFLNAGLPVTILETTAEALE 336

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           +G+ TI  N    V +GKL +DK    + +L   L Y++    D+VIEAV E + +KQ++
Sbjct: 337 RGVATIRRNYEAQVKKGKLKEDKYQQRMALLTTTLSYADLAGCDLVIEAVYEDLGVKQQV 396

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F  L++   P  ILA+NTST+D+N +   T     ++G HFFSPA+VM LLE+VR E+T+
Sbjct: 397 FGALDEVVKPGAILASNTSTLDVNRIAGFTKRPADVVGMHFFSPANVMKLLEVVRGEKTA 456

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
             V+  +M + K I+K  VV G C GF  NR    YS+ A  L+  G    ++D A+ +F
Sbjct: 457 KDVLATVMQLAKTIRKTAVVSGVCDGFIGNRMIEQYSRQAGFLLEEGCTPQQVDKAVEAF 516

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 424
           G  +GPF++ DLAG  +  A  K      P   + S   DLL + GR G+  G G Y Y 
Sbjct: 517 GFAMGPFRMGDLAGNDIGWAIRKRRYVEQPQMRY-SQTADLLCEMGRYGQKTGAGWYDYA 575

Query: 425 KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
            G   K D    P++EE         G    ++++ EIV  +++ +VNE  ++LE+GI  
Sbjct: 576 PG---KRDAIPSPVVEEMVAKHRAGLGITARTISDDEIVHRLVYALVNEGAKILEDGIAS 632

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEE 541
           +ASD+D   + G  FP +RGG + +AD+ G   V  ++K +++       F++P+  L  
Sbjct: 633 KASDIDMVYLTGYGFPLWRGGPMCYADSQGLFNVVQTMKAFARNPLDDAGFWEPAPLLAR 692

Query: 542 RATKGIPLSA 551
            A +G   +A
Sbjct: 693 LAAEGRRFTA 702


>gi|254466277|ref|ZP_05079688.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium Y4I]
 gi|206687185|gb|EDZ47667.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium Y4I]
          Length = 706

 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 159/448 (35%), Positives = 254/448 (56%), Gaps = 8/448 (1%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+ +E ++F EL+  D  +GL+H FF++RA SK+P +   G+ PR V  + VIGGG MG+
Sbjct: 255 GLKRERELFMELMDSDQRQGLIHAFFSERAVSKLPELD--GVAPREVASMGVIGGGTMGA 312

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGVL 219
           GIATA +L  + VVL E+  E +      IE N++G + RGK++  + +    + L    
Sbjct: 313 GIATAALLAGLPVVLIEMTDEAVTAARGRIEGNLKGALKRGKISPAQYDQLTGEALTVAT 372

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY+   DVD+V+EAV E + +K+++F +L+  C P  +LATNTS +D++ +   TS  + 
Sbjct: 373 DYAALSDVDLVVEAVFEDMGVKREVFGKLDAHCKPGAVLATNTSYLDVDEIAAATSRPED 432

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           +IG HFFSPAHVM LLE+V  E+T+ +V+     +GK +KKV V  G C GF  NR    
Sbjct: 433 VIGLHFFSPAHVMKLLEVVVAEKTAPEVLATGFALGKRLKKVAVRSGICDGFIGNRIMNA 492

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
           Y ++A  +V  G   +++D  +  FG P+GPF + DLAG  +  A  K        R   
Sbjct: 493 YRKAAEYVVLDGASPYQVDKVVTGFGFPMGPFAMGDLAGLDINWAARKRRAPTRDPRERV 552

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVT 458
               ++L + G  G+  GKG Y YE+G +   P+P V  +I + +    +     P   +
Sbjct: 553 PRFYEMLCEGGDFGQKTGKGFYIYEEGRRGGVPNPEVAALIAKDQEQQGV----SPREFS 608

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           + E++   +  +VNE+ +V+ EGI  R  D+D   + G  FP + GG + WAD  G + +
Sbjct: 609 DAEVLRRYMCAMVNEASKVVGEGIARRPLDVDMVMLFGYGFPRFWGGPLKWADLQGLDGI 668

Query: 519 YTSLKKWSQLYGNFFKPSRFLEERATKG 546
              ++ ++   G F++P+  LE+   +G
Sbjct: 669 LADIRAYAAEDGFFWQPAPLLEQLVAEG 696


>gi|407779694|ref|ZP_11126947.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
 gi|407298464|gb|EKF17603.1| enoyl-CoA hydratase [Nitratireductor pacificus pht-3B]
          Length = 690

 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 189/550 (34%), Positives = 277/550 (50%), Gaps = 22/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGSL 59
           +++  K +  E+   LG +DAV   +  L+ + +  L    A   P      R +KL   
Sbjct: 152 IIVSGKPVGMEKAQALGAVDAVADGD--LRAAAMAFLRAKIAEDGPHRHIRARDEKLAVD 209

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
            +A E    A   A K A  +       + +   I       + +E ++F E      S 
Sbjct: 210 LDAFEA---AVADATKKARGLTAPLTAAEAVRNAITMAFDDALARERELFLERRDSLESA 266

Query: 120 GLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
              H+FFA R  +KVP +  D   +P  + K AVIG G MG+GIA A     I V L E+
Sbjct: 267 AQRHLFFATREATKVPGIARDTQARP--IEKAAVIGAGTMGAGIAMALANGGIEVRLLEL 324

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N+E L +G+  I+    G V RG +   +    L  + G  DY+   D D+ IEAV E +
Sbjct: 325 NAEALERGLGQIDKTYAGSVKRGSIDAAEKEARLARISGTTDYAALSDCDIAIEAVFEDM 384

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K K+F  L+K   P  ILA+NTS +DL+ +   T     ++G HFFSPAHVM LLEIV
Sbjct: 385 GVKHKVFGALDKVMKPGAILASNTSYLDLDEIAASTGRPQDVVGLHFFSPAHVMRLLEIV 444

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R + T+ +V+   + + + I KVPVVVG C GF  NR      +    L+  G    ++D
Sbjct: 445 RGDHTAPEVLASALALARRIGKVPVVVGVCNGFVGNRMLAARREENESLLLSGATPEQVD 504

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
                FG P+GPF ++DLAG  ++    +            +P+ D L ++G  G+  G+
Sbjct: 505 RVFADFGWPMGPFAMVDLAGLDISWKHRQSL-------GLTAPVADALCEAGHFGQKAGR 557

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y YE GS+ PKPDP V  +IE  R+   +  G +  +V  +EI E  L+P++NE  R+
Sbjct: 558 GFYLYEDGSRTPKPDPFVAELIE--RKADEL--GIERRTVGAEEITERTLYPMINEGARI 613

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPS 536
           +EEGI  RASD+D   V G  FP  +GG +FWA+  G   +   L+ W    G   FKP+
Sbjct: 614 VEEGIAARASDVDVVWVNGYGFPVAKGGPMFWAEHFGIGRIVDRLEHWYGETGKEVFKPA 673

Query: 537 RFLEERATKG 546
             L + A  G
Sbjct: 674 PLLRQLALTG 683


>gi|226943850|ref|YP_002798923.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
 gi|226718777|gb|ACO77948.1| 3-hydroxyacyl-CoA dehydrogenase [Azotobacter vinelandii DJ]
          Length = 697

 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 164/443 (37%), Positives = 250/443 (56%), Gaps = 10/443 (2%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+ +E ++F  L     SR L H F A+RA  K+P + D       V +V V+G G MG+
Sbjct: 244 GLEEEGRLFAGLHAGPQSRALCHAFLAERAAGKIPGIDD-STPTIPVERVGVVGAGTMGT 302

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GIA   +     V L E   + L +G+  +  +  GL+ + +L Q + +  L  L G LD
Sbjct: 303 GIAIVFLNAGFEVALLESGEQALERGLAVVREHFAGLLAKKRLDQAQCDALLGKLSGSLD 362

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y+   DV + +EAV E + +K+++   L++A P   ILA+NTST+DLN++ E TS  + +
Sbjct: 363 YAALGDVQLAVEAVFEDLEVKRQVLRRLDEALPDGAILASNTSTLDLNLLAEATSRPESV 422

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G HFFSPA VM LLE+VR  RT+  V+   M +GK ++KV V  G C GF  NR    Y
Sbjct: 423 VGLHFFSPAQVMRLLEVVRGRRTADSVMATAMRLGKRLQKVSVASGVCDGFIGNRMLNEY 482

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            + A LL+  G   ++ID A+ ++G+ +GPF++ D+AG  +  A  K    A P   F S
Sbjct: 483 LRVAGLLLDAGALPWQIDRALETWGMAMGPFRMCDMAGNDIGWAIRKRQRAADPGLRF-S 541

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
              DLL + GR G+  GKG Y YE G +   PDP V  +I+  R  + ++    P ++ +
Sbjct: 542 ATADLLCEQGRFGQKTGKGWYRYEAGRRGGTPDPEVERLIDAYRTRAGLL----PRTIGD 597

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EIVE  ++ +VNE  R+LEEGI +RASD+D   + G  FP  RGG + +A+  G   V 
Sbjct: 598 REIVERCIYALVNEGARLLEEGIALRASDVDVVYLAGYGFPRLRGGPMHYAEEQGLANVV 657

Query: 520 TSLKKWSQLYGN---FFKPSRFL 539
             +++++   G    F+ P+  L
Sbjct: 658 RRMREFACEEGGDARFWTPAPLL 680


>gi|254247097|ref|ZP_04940418.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
 gi|124871873|gb|EAY63589.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 720

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 179/547 (32%), Positives = 275/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  +++E   LGL+D +  S++ L     +A ++ +   P +R       L   +
Sbjct: 171 LMLTGRHASADEALALGLVDRIAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLADRA 229

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 230 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKFERSLFLQCLDSPQRAG 289

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P        PR V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 290 LVHAFFAEREAAKAPEARRA--SPRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 347

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 348 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 407

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 408 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 467

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 468 ARVSADVVATAFALAKQLKKTPVRAGVCDGFIGNRVLAVYRTAADYLMEDGASPYQIDRA 527

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K         +    + D L + G  G+  G+G 
Sbjct: 528 VRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 587

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ E R    +     P + T+ EI+   L  ++NE   V+ 
Sbjct: 588 YLYPDGARVGTPDPEVEAIVAEERAKKGVT----PRTFTDDEILRRYLAAMINEGANVVH 643

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ +++    F+KPS  L
Sbjct: 644 EKIALRPLDVDAVFLYGYGFPRYRGGPMHYADTVGLANVLADIRAFAKEDPLFWKPSPLL 703

Query: 540 EERATKG 546
            +   +G
Sbjct: 704 VDLVARG 710


>gi|161523604|ref|YP_001578616.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia multivorans ATCC
           17616]
 gi|189351627|ref|YP_001947255.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
           17616]
 gi|160341033|gb|ABX14119.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
           multivorans ATCC 17616]
 gi|189335649|dbj|BAG44719.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia multivorans ATCC
           17616]
          Length = 710

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 281/547 (51%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +A ++ +   P  R+      L   +
Sbjct: 161 LMLTGRHASAEEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRT-RDAQALADRA 219

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQPFDAGMKLERSLFLQCIDSPQRAG 279

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +KVP       +P  + ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 280 LVHAFFAEREAAKVPEARRGTARP--IERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E     LV +G++T       +  LKG   Y     VD+VIEAV E + +
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTPAAQAARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + + +KK+PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 458 ARASADVVATAFALARQLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+  G+G 
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+E+ R    I+    P + T+ EI+   L  ++NE   V+ 
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV----PRAFTDDEILRRYLAAMINEGANVVH 633

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ +++    F+KPS  L
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFAEEDPLFWKPSPLL 693

Query: 540 EERATKG 546
            E   +G
Sbjct: 694 VELVERG 700


>gi|421471274|ref|ZP_15919575.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           multivorans ATCC BAA-247]
 gi|400225835|gb|EJO55970.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           multivorans ATCC BAA-247]
          Length = 710

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 281/547 (51%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +A ++ +   P  R+      L   +
Sbjct: 161 LMLTGRHASAEEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRT-RDAQALADRA 219

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAG 279

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +KVP       +P  + ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 280 LVHAFFAEREAAKVPEARRGTARP--IERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E     LV +G++T       +  LKG   Y     VD+VIEAV E + +
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTPAAQAARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + + +KK+PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 458 ARASADVVATAFALARQLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+  G+G 
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+E+ R    I+    P + T+ EI+   L  ++NE   V+ 
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV----PRAFTDDEILRRYLAAMINEGANVVH 633

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ +++    F+KPS  L
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFAEEDPLFWKPSPLL 693

Query: 540 EERATKG 546
            E   +G
Sbjct: 694 VELVERG 700


>gi|452752262|ref|ZP_21952005.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
 gi|451960338|gb|EMD82751.1| Enoyl-CoA hydratase [alpha proteobacterium JLT2015]
          Length = 685

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 178/547 (32%), Positives = 282/547 (51%), Gaps = 18/547 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++  + I + E  K+GL+D  +  E+ L+   +      A+      +  RTD+L   +
Sbjct: 152 MIVFGRPIGAGEAEKIGLVD-TLAGEDSLEADAIAFAREKAKADSHPATSRRTDRLPDAA 210

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              ++    + +  +         AC+  +          GV  E + F +L+  D S+ 
Sbjct: 211 HIGQIFDDFKAKNGRKMRGFDAPAACMRCVRAAAELPYVEGVKVEREEFMKLMQGDQSKA 270

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             H+FFA+R  +K+ +V  D  L P  +RKV +IG G MG GIA   +   I V + E+ 
Sbjct: 271 QRHLFFAERQAAKIDDVPKDTPLIP--IRKVGIIGAGTMGGGIAMNFLSAGIPVTMLEMK 328

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G   +  N  G V RG+++++KA  A+ +L   LDY++  D D+VIEAV ES+ 
Sbjct: 329 QEALDRGTGVMGKNYEGNVKRGRMSEEKAKAAMDLLSTTLDYADLADCDLVIEAVFESMD 388

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F +L+       ILA+NTS ++++ + + T     ++G HFFSPA+VM LLE+VR
Sbjct: 389 VKKDVFGKLDAHVKDGAILASNTSYLNVDEIAQATKRPGYVVGMHFFSPANVMKLLEVVR 448

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              T   V+  +M + K I KV VV G C GF  NR   P  + A  L+  G   ++ID 
Sbjct: 449 GAETRPDVLATVMALSKKIGKVAVVAGVCHGFIGNRMLSPRQREANKLIMEGATPWQIDK 508

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
             + FG+P+GPFQ+ DLAG  +             D +    L D L    R G+  G G
Sbjct: 509 VHQEFGMPMGPFQMSDLAGLDIGWHR---------DTNRIESLRDELCAMDRRGQKTGAG 559

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  +  P  +V  +I +         G     ++++EI E  L+P+VNE   +LE
Sbjct: 560 FYDYDENRRGTPSDTVEALIRKWAEKE----GTPQREISDEEIRERTLYPMVNEGALILE 615

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG+  RASD+D   + G  +P YRGG +FWAD  GA+ +   L+K      +  K S+ L
Sbjct: 616 EGMAQRASDIDVVWIYGYGWPRYRGGPMFWADLEGADTILAGLEKHQDKMPD-LKISQLL 674

Query: 540 EERATKG 546
           +++A KG
Sbjct: 675 KDKAAKG 681


>gi|320332993|ref|YP_004169704.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
 gi|319754282|gb|ADV66039.1| 3-hydroxybutyryl-CoA epimerase [Deinococcus maricopensis DSM 21211]
          Length = 690

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 187/547 (34%), Positives = 287/547 (52%), Gaps = 15/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +M    S++  +   +GL+D V+T + LL  ++ +A  +AA   P  R   R     ++ 
Sbjct: 151 LMTTGDSVSGAQAHAMGLVDEVITGD-LLTGAQAFAERVAAA-WPLPRVSERPVNAATVD 208

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                    R   ++ A  +      +D++E         G+  EA  F   +    SRG
Sbjct: 209 -----FAAVRAALQQRARGLASPFLIVDLVEASTRVPFEEGLRLEADAFMRALQTPQSRG 263

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FFA+R  +K+ N    G   R VR VAVIG G MG GIA       + V L E   
Sbjct: 264 LRHAFFAEREAAKI-NGLPKGTPTRDVRSVAVIGAGTMGGGIAMNFANAGVPVTLVETQR 322

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  I  N      +G+LT  +    + +L+  LD ++  D D+VIEAV E++ +
Sbjct: 323 EALDRGLAVIRRNYEQSARKGRLTPQQVEERMGLLRPTLDMADIADADLVIEAVFENMDV 382

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F++L+    P  +LATNTST+D++ +   T    R++G HFFSPA+VM LLE+VR 
Sbjct: 383 KKAVFAQLDAHAKPTAMLATNTSTLDVDALAAGTRDPSRVLGMHFFSPANVMKLLEVVRG 442

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ERT+  V+  +M V + I+KV VVVG C GF  NR    Y + A  L+  G     +D A
Sbjct: 443 ERTAPDVLATVMRVARTIRKVGVVVGVCDGFVGNRMINAYGREAHQLLVEGASPRDVDDA 502

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAAT-SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           + +FGLP+GPF++ D+AG  +  A   +   +A  DRS    ++D L+  GR G+  G G
Sbjct: 503 MHAFGLPMGPFEMSDMAGLDIGYAIRQRHAHEAGLDRS--DTVLDRLVDLGRKGQKTGAG 560

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           +Y Y  G  P+PD     ++ + R    +     P  V  +EI + +++ +VNE  R+LE
Sbjct: 561 VYRYADGRTPEPDAVTDDVLTQYRAEQGV----TPRDVPREEITKRLVYQLVNEGARILE 616

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG+  RASD+D   + G  FP+YRGG + +AD VG   V   ++     +G+ + P+  L
Sbjct: 617 EGVAQRASDIDVIYLYGYGFPAYRGGPMRYADEVGLARVLADIRALHAQHGSTWAPAPLL 676

Query: 540 EERATKG 546
           E  A  G
Sbjct: 677 ERLARDG 683


>gi|170734224|ref|YP_001766171.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia cenocepacia MC0-3]
 gi|169817466|gb|ACA92049.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
           cenocepacia MC0-3]
          Length = 708

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 274/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +A ++ +   P +R       L   +
Sbjct: 159 LMLTGRHASAEEALALGLVDRIAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 218 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKLERNLFLQCLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P        PR V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 278 LVHAFFAEREAAKAPEARRA--SPRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 396 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R S  V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 456 ARVSPDVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K         +    + D L + G  G+  G+G 
Sbjct: 516 VRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ E R    I     P + T+ EI+   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVGAIVAEERAKKGIT----PRTFTDDEILRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ +++    F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLYGYGFPRYRGGPMHYADTVGLANVLADIRAFAKEDPLFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|91784409|ref|YP_559615.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia xenovorans LB400]
 gi|91688363|gb|ABE31563.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia xenovorans LB400]
          Length = 706

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 177/547 (32%), Positives = 282/547 (51%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  +  +++E   LGLID + +S ++L     +  ++ A   P +R        G  +
Sbjct: 157 LILSGRHASAKEALALGLIDRLGSSGDILAEGLAYVHELLAAHAP-VRRTRDAVAPGDRA 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +   +  AR +  K +  +      +D +E  I      G+  E K+F E +      G
Sbjct: 216 ASLAAVTAARAETAKKSRGLFSPLKIVDAVEAAIEQPFDEGLRLERKLFLECLDSPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R   K P   D   KPR +  + V+GGG MG+GIA A +   + V + E + 
Sbjct: 276 LIHAFFAEREVLKAPETRDA--KPRALNAIGVVGGGTMGAGIAVAVLDAGLPVTMIERDD 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G+  IE    GL+ RG+++ +K    +    G   Y    D D+VIEAV E + +
Sbjct: 334 ASLARGLAHIEKVYDGLIARGRMSAEKKAAVMTRWNGSTSYDALTDADLVIEAVFEDLAV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL++ C    +LATNTS +D++ +    S    +IG HFFSPA++M LLE+V  
Sbjct: 394 KQAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPANIMKLLEVVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           +R SA V+     + K ++K PV  G C GF  NR    Y  +A  ++  G   ++ID+A
Sbjct: 454 KRVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRVLAVYRAAADAMMEDGASPYQIDAA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R+FG P+GPFQ++DLAG  +  A  K         +    + D L + G  G+  G+G 
Sbjct: 514 VRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTGRGF 573

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +GS+   PDP V  II+  R  + I P     S T+ EI+   +  ++NE   V+ 
Sbjct: 574 YLYPEGSRSGTPDPEVEAIIDAERARAGITPR----SFTDDEIIRRYMAAMINEGANVVH 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   +   ++++++    F+K S  L
Sbjct: 630 ERIALRPLDVDVTLLYGYGFPRYRGGPMKYADMVGLPKILADIREFAKEDPLFWKASPLL 689

Query: 540 EERATKG 546
            E   +G
Sbjct: 690 VELVERG 696


>gi|407798586|ref|ZP_11145493.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
           JLT2003]
 gi|407059547|gb|EKE45476.1| peroxisomal bifunctional enzyme [Oceaniovalibus guishaninsula
           JLT2003]
          Length = 704

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 175/544 (32%), Positives = 278/544 (51%), Gaps = 12/544 (2%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 64
            + I+++E  KLGLID +   ++     R   L  A R     R+  R  +  +     +
Sbjct: 158 GRQISADEALKLGLIDTLAEGDD----PRAAGLAEARRWLDEGRAPRRLSETAAPDADPQ 213

Query: 65  VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 124
            L   R +  K+A         LDV+ +G+      G+  E + F +L+       ++H 
Sbjct: 214 TLDRWRARVAKSARGQVAPLRALDVVADGLAMPFADGMAMERQAFMDLMRTPERAAMIHA 273

Query: 125 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FFA+R  ++  ++   G+KPR V ++ VIGGG MG GIA + ++  + V L E +     
Sbjct: 274 FFAERRAAQQDDLA--GVKPRKVDRIGVIGGGTMGQGIAASALMAGLDVTLVERDDAAAE 331

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
           K    I   + G   RGK+ QD     +    + V  Y      D+VIEAV E++ +KQ 
Sbjct: 332 KARGGIGKMLDGAARRGKIAQDAPAALMDGSFRAVTRYDALAQADLVIEAVFENMEVKQD 391

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F  L+  C P  +LATNTS +D+N + + T+    +IG HFFSPAHVM LLEIV  +RT
Sbjct: 392 VFRTLDGICRPGAVLATNTSYLDVNRIADATARPQDVIGLHFFSPAHVMRLLEIVVADRT 451

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           + +V      + K + K+ V  G C GF  NR    Y  +A  +V  G   + ID A+ +
Sbjct: 452 APEVAATAFALAKRMGKIGVRSGVCDGFIGNRMLSTYRAAADHMVLDGASPYDIDRAMVA 511

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 423
           FG P+GP+Q+ DLAG  +  AT +        R       D L+++GR G+  G+G Y Y
Sbjct: 512 FGFPMGPYQVGDLAGLDIGHATRQRKAATRDPRERVPVFADRLVEAGRLGRKTGRGYYIY 571

Query: 424 EKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
           +  +   +PDP V P+++  R    I     P   +++EI    +  +VNE  R+L+EGI
Sbjct: 572 DDETPAGRPDPEVEPMLDGIRADLGI----APRQFSDEEIQSRYMAAMVNEGARILDEGI 627

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEER 542
             RASD+D   + G  FP ++GG + WADA G + +   + ++++    F++ +  L + 
Sbjct: 628 AARASDIDVVLLHGYGFPRWKGGPMHWADAQGLDRIADDIARYAEHDAYFWQIAPLLADL 687

Query: 543 ATKG 546
           A +G
Sbjct: 688 AARG 691


>gi|120612950|ref|YP_972628.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax citrulli AAC00-1]
 gi|120591414|gb|ABM34854.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Acidovorax
           citrulli AAC00-1]
          Length = 710

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 159/447 (35%), Positives = 243/447 (54%), Gaps = 7/447 (1%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+ +E   F E +      GL+H FFA+R  +KVP        PR V  +AVIGGG MG+
Sbjct: 256 GMQRERAAFMECLASPQRAGLIHAFFAEREVAKVPEAK--AAAPRPVASIAVIGGGTMGA 313

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI  + +   + V + E +   L +G   +E    GL+ +G++T D     +    G   
Sbjct: 314 GITVSALDAGLPVTMIERDDASLARGRAHVEKVYDGLIAKGRMTADAKAAVMARYTGSTR 373

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y +    D+VIEAV E + +K+ +F EL++ C P  +LATNTS +D++ +   T     +
Sbjct: 374 YEDIAAADLVIEAVFEDLEVKKAVFRELDRVCKPGAVLATNTSYLDIDAIAAATGRPRDV 433

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG HFFSPA++M LLEIV   +  A V+     + K +KKVPV  G C GF  NR    Y
Sbjct: 434 IGLHFFSPANIMKLLEIVVPAKVGADVVATAFALAKQLKKVPVRAGVCDGFIGNRILAVY 493

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            Q+A  L+  G   + ID+A+R FG P+GPFQ+ DLAG  +  AT K        ++   
Sbjct: 494 KQAADYLMEDGASPYEIDAAVRGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYV 553

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
            + D + + G  G+  G+G Y Y +G++  +PDP VL I++  R    ++    P S T 
Sbjct: 554 EIADRICERGWFGQKTGRGFYLYPEGARTGQPDPEVLAIVDAERAKKGVV----PRSFTP 609

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
            EI+   +  +VNE  +V+EEGI +R  D+D   + G  FP +RGG + +AD VG   + 
Sbjct: 610 HEIMRRYMAAMVNEGAKVVEEGIALRPLDVDVTFLSGYGFPRFRGGPMHYADTVGLPKLL 669

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATKG 546
             +++++Q    F+KP+  LE+   +G
Sbjct: 670 ADIREFAQEDPLFWKPAPLLEKLVAEG 696


>gi|92115984|ref|YP_575713.1| 3-hydroxyacyl-CoA dehydrogenase [Nitrobacter hamburgensis X14]
 gi|91798878|gb|ABE61253.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Nitrobacter hamburgensis X14]
          Length = 707

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 183/563 (32%), Positives = 297/563 (52%), Gaps = 18/563 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++  + + + E  K GLIDA+V  E        +A  + A R+P  R      +L +  
Sbjct: 152 MIVGGEPVGATEALKQGLIDAIV--EGPASGGEAFACRVLAERRPLRRLRDDDSRLMAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K A  +    A  + +   +       + +E ++F +L+  D S+ 
Sbjct: 210 ANRSIFTDAVAAVTKRARGLEAPFAAAEAVGLSLDTPFDEALKQERELFLKLMNGDQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  ++V  V + G KPR V +VA+IG G MG GIA +     I V L E+  
Sbjct: 270 QRYAFFAEREAARVAGVPE-GTKPRKVERVAIIGAGTMGGGIAMSFANAGIPVTLIEMGD 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  +  N      RG +  D+    + ++ GV+     KD D+VIEAV E++ +
Sbjct: 329 ESLKRGLGVMRKNFEATAARGGIAADEPARRMGLVTGVVGLEHVKDADLVIEAVFETMAV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ L+K      +LA+NTS +++N +   T     ++G HFFSPA+VM L EIVR 
Sbjct: 389 KKEVFATLDKFARSGAVLASNTSYLNINEIASVTKRPQDVLGMHFFSPANVMKLCEIVRG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+  V++  + V + I KVPVVVG C GF  NR     S+ A  L+  G    ++D+ 
Sbjct: 449 AKTAPDVLVTAVAVARRIAKVPVVVGVCDGFVGNRMLAARSRQADKLLFEGALPRQVDAV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
              FG+P+GPF + DLAG  +   + +       DR  +S + D L ++GR G+  GKG 
Sbjct: 509 ATRFGMPMGPFAMDDLAGLDIGWRSRR-------DRGVKSEIADALCEAGRFGQKTGKGY 561

Query: 421 YTYEKGSK-PKPDPSVLP-IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y YE GS+ P PDP V   I++ C RL     G +   + + EI+E +++P VNE  R+L
Sbjct: 562 YKYEGGSRAPLPDPDVETLIVDACARL-----GLRRREIGDNEILERLVYPTVNEGARIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
           EEGI  R  D+D   + G  +P YRGG +++AD VG  ++   L  +++   +   +P+ 
Sbjct: 617 EEGIAARPGDIDVVWLYGYGWPIYRGGPMYYADQVGLRHIADRLSYYAEATNDPSLEPAP 676

Query: 538 FLEERATKGIPLSAPVSSSSTSR 560
            L+  A +G   ++P +   +++
Sbjct: 677 LLKRLAAEGRTFASPAAGRKSTQ 699


>gi|226362027|ref|YP_002779805.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
 gi|226240512|dbj|BAH50860.1| fatty oxidation complex alpha subunit [Rhodococcus opacus B4]
          Length = 687

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 183/513 (35%), Positives = 269/513 (52%), Gaps = 21/513 (4%)

Query: 18  LIDAVVTSEELLKVSRLWALDIAARRKPWIRSLH--RTDKLGSLSEAREVLKLARLQAKK 75
           L D VV S+ +    +       + + P IR L     + LG L          R Q  K
Sbjct: 172 LFDRVVDSDTITAAIQFAGEMAVSGKCPRIRDLEVIGDEDLGPL----------RAQLTK 221

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            +         LD++E         G+  E   F ELV  D S  L H FFA+R   K+P
Sbjct: 222 RSRGFEAPLVALDLVERARSVPFAEGLDAERAAFLELVGGDQSAALRHAFFAERTARKIP 281

Query: 136 NVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 194
            +  D  ++P  VR+VAV+G G MG GIA   +   I V++ E + E L +G+ TI  N 
Sbjct: 282 GLDPDTTVRP--VREVAVVGAGTMGGGIAMNFLNAGIPVIVLETSQEPLARGLATIRRNY 339

Query: 195 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 254
           +  V +GKLT +     + +L+  +DY++  D D+ IEAV E + +K+ +F+EL++   P
Sbjct: 340 QAQVDKGKLTPEAMEQRMGLLRPTVDYADLADCDLAIEAVFEDMDVKRAVFTELDEVMKP 399

Query: 255 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 314
             ILA+NTST+D++ +   T     ++G HFFSPA+VM LLEIVR ++T+  V+  +  V
Sbjct: 400 GAILASNTSTLDVDTIAAFTRRPADVVGMHFFSPANVMTLLEIVRADKTADDVLATVSAV 459

Query: 315 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 374
           G+ I KV VV G C GF  NR    Y  +A  L+  G    RIDSAI  FG  +GP+++ 
Sbjct: 460 GQRIGKVTVVSGVCDGFIGNRMLARYRGAANALLEAGASPERIDSAIEDFGYAMGPYRVG 519

Query: 375 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDP 433
           DLAG  +  A  K      PD   +  + D L + GR G+  G G Y YE G +   P P
Sbjct: 520 DLAGGDIGWAIRKRRYAENPDLP-RDEISDRLCEMGRFGQKTGAGWYDYEPGRRDAIPSP 578

Query: 434 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 493
            V  ++E   R        +    T +EIV+ ++F +V+E  R+L+EGI +RASD+D   
Sbjct: 579 VVAELLESYHREKRT----RRQDFTPEEIVQRLVFALVDEGARILDEGIALRASDIDVVY 634

Query: 494 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           + G  FP +RGG +F+A  VG   V  +L+ + 
Sbjct: 635 LAGYGFPRHRGGPMFYAGTVGLATVEQALRTFD 667


>gi|264679089|ref|YP_003278996.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
 gi|262209602|gb|ACY33700.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
           testosteroni CNB-2]
          Length = 699

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 175/510 (34%), Positives = 273/510 (53%), Gaps = 13/510 (2%)

Query: 47  IRSLHRTDKLGSLSEAREV-LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 105
           +R L R   L       E   + A    +  + N P    CL+ ++         G++ E
Sbjct: 197 VRPLPRVRDLSCKHPQGEAYFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDDGMVAE 256

Query: 106 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP-RGVRKVAVIGGGLMGSGIAT 164
            + F +L+M   SR L H+F A+RA SK+P+V   G  P R +  V VIG G MG GI+ 
Sbjct: 257 REAFMQLMMTPESRSLRHLFMAERAASKIPDVP--GDTPVREIWTVGVIGAGTMGGGISM 314

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
             +   I V + E   E L +G+ TI  N    V +GKL++ K    + +L   L+Y + 
Sbjct: 315 NFLNAGIPVTILETKQEALDRGVATIRKNYEAQVKKGKLSEQKYEQRMALLSTTLNYGDL 374

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
           K+ D++IEAV E + +K+++F +L++   P  ILA+NTST+D++ +   T     ++G H
Sbjct: 375 KNADLIIEAVFEELGVKEQVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMH 434

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSA 344
           FFSPA+VM LLE+VR + T+  V+  +M VGK IKK  VV G C GF  NR    YS+ A
Sbjct: 435 FFSPANVMKLLEVVRGKATAKDVLATVMKVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQA 494

Query: 345 RLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVD 404
             L+  G    ++D AI  FG  +GPF++ DLAG  +  A  K      PD  + S   D
Sbjct: 495 GFLLDEGASPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYIEKPDMKY-SASAD 553

Query: 405 LLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 463
            L + GR G+  G G Y Y  G +   P   V  +I+E R+   I     P  ++++EIV
Sbjct: 554 RLCELGRFGQKTGAGWYDYVPGKRDAIPSEVVAKMIDEHRKSLGIT----PRKISDEEIV 609

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
           + +++ +VNE  ++LE+GI  ++ D+D   + G  FP +RGG + +A  VG   V  ++ 
Sbjct: 610 QRLVYALVNEGAQILEDGIASKSGDIDMVYLTGYGFPLWRGGPMHYAGEVGLFNVVQAMG 669

Query: 524 KWSQLYGN---FFKPSRFLEERATKGIPLS 550
           +++Q   +   F++P+  L + A +G   S
Sbjct: 670 RFAQNPNDDAKFWQPAPLLAKLAAEGKQFS 699


>gi|299533351|ref|ZP_07046734.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
           testosteroni S44]
 gi|298718667|gb|EFI59641.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
           testosteroni S44]
          Length = 699

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 174/510 (34%), Positives = 272/510 (53%), Gaps = 13/510 (2%)

Query: 47  IRSLHRTDKLGSLSEAREV-LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKE 105
           +R L R   L       E   + A    +  + N P    CL+ ++         G++ E
Sbjct: 197 VRPLPRVRDLSCKHPQGEAYFEFAATMVQGMSKNFPAPLRCLEAVKNATTKKFDDGMVAE 256

Query: 106 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP-RGVRKVAVIGGGLMGSGIAT 164
            + F +L+M   SR L H+F A+RA SK+P+V   G  P R +R V VIG G MG GI+ 
Sbjct: 257 RETFMQLMMTPESRSLRHLFMAERAASKIPDVP--GDTPVREIRTVGVIGAGTMGGGISM 314

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
             +   I V + E   E L +G+ TI  N    V +GKL++ K    + +L   L+Y + 
Sbjct: 315 NFLNAGIPVTILETKQEALDRGVATIRKNYEAQVKKGKLSEQKYEQRMSLLSTTLNYGDL 374

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
           K+ D++IEAV E + +K+++F +L++   P  ILA+NTST+D++ +   T     ++G H
Sbjct: 375 KNADLIIEAVFEELGVKEQVFKQLDEVAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMH 434

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSA 344
           FFSPA+VM LLE+VR + T+  V+  +M VGK IKK  VV G C GF  NR    YS+ A
Sbjct: 435 FFSPANVMKLLEVVRGKATAKDVLATVMKVGKKIKKTAVVSGVCDGFIGNRMIEQYSRQA 494

Query: 345 RLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVD 404
             L+  G    ++D AI  FG  +GPF++ DLAG  +  A  K      PD  + S   D
Sbjct: 495 GFLLDEGASPQQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRYVEKPDMKY-SASAD 553

Query: 405 LLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 463
            L + GR G+  G G Y Y  G +   P   V  +I+E R+   I     P  ++++EIV
Sbjct: 554 RLCELGRFGQKTGAGWYDYVPGKRDAIPSEVVAKMIDEHRKSLGIT----PRKISDEEIV 609

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
           + +++ + NE   +LE+GI  ++ D+D   + G  FP +RGG + +A  VG   V  ++ 
Sbjct: 610 QRLVYALANEGAHILEDGIASKSGDIDMVYLTGYGFPLWRGGPMHYAGEVGLFNVVQAMG 669

Query: 524 KWSQLYGN---FFKPSRFLEERATKGIPLS 550
           ++++   +   F++P+  L + A +G   S
Sbjct: 670 RFAKNPNDDAKFWQPAPLLAKLAAEGKQFS 699


>gi|160898754|ref|YP_001564336.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Delftia acidovorans
           SPH-1]
 gi|160364338|gb|ABX35951.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Delftia acidovorans
           SPH-1]
          Length = 703

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 183/544 (33%), Positives = 283/544 (52%), Gaps = 23/544 (4%)

Query: 18  LIDAVVTS-EELLKVSRLWALDIAARRK-----PWIRSLHRTDKLGSLSEAREVLKLARL 71
           L D +  S E LL  ++ +AL++A +       P +R L      G         + AR 
Sbjct: 172 LFDKMAASPESLLDEAKAFALEVADKHAAGGPLPRVRDLPCKHPQGD-----AYFQFARN 226

Query: 72  QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131
             K  A N P    C+D +E         G+  E   F +L+    SR L H+F A+RA 
Sbjct: 227 MVKGMAKNYPAPARCVDTVENAARKKFDEGMALERDAFMQLMWSPESRALRHLFMAERAA 286

Query: 132 SKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190
           SK+ +V +D  +  R ++ V VIG G MG GI+   +   I V + E   E L +G+ TI
Sbjct: 287 SKIADVPSDTAV--RDIKTVGVIGAGTMGGGISMNFLNAGIPVTILETKQEALDRGVATI 344

Query: 191 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 250
             N    V +GKLTQ+K +  + +L   L Y   K+ D++IEAV E + +K+ +F +L++
Sbjct: 345 RKNYEAQVKKGKLTQEKYDQRMALLSTTLSYDALKNADLIIEAVFEELGVKETVFKQLDE 404

Query: 251 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 310
              P  ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+  V+  
Sbjct: 405 VAKPGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGKHTAKDVLAT 464

Query: 311 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 370
           +M + K IKK  VV G C GF  NR    YS+ A  L+  G    ++D AI  FG  +GP
Sbjct: 465 VMKLAKKIKKTAVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPAQVDKAIEKFGFAMGP 524

Query: 371 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK 430
           F++ DLAG  +  A  K       D  + S   D L + GR G+  G G Y Y+ G +  
Sbjct: 525 FRMGDLAGNDIGWAIRKRRAVERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDA 583

Query: 431 -PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 489
            P   V  +IE  R+   I     P  ++++EIV+ ++F +VNE   +LE+GI  ++ D+
Sbjct: 584 IPSELVNQMIESHRKELGIT----PRKISDEEIVQRLVFALVNEGAHILEDGIAGKSGDI 639

Query: 490 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
           D   + G  FP +RGG + +A  VG   V  ++ ++++      +F++P+  L + A +G
Sbjct: 640 DMVYLTGYGFPIWRGGPMHYAGEVGLFNVVQAMNRFAKNPNDDADFWQPAPLLAKLAAEG 699

Query: 547 IPLS 550
              S
Sbjct: 700 KQFS 703


>gi|163761199|ref|ZP_02168275.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Hoeflea phototrophica DFL-43]
 gi|162281538|gb|EDQ31833.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Hoeflea phototrophica DFL-43]
          Length = 694

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 190/547 (34%), Positives = 286/547 (52%), Gaps = 16/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MM    S+T++E  ++GL+D V   +   +    +A ++     P +R++    +     
Sbjct: 151 MMPAGGSVTADEALEIGLVDRVAEGDAR-EAGLAYARELLESGAP-VRAVGTLPR--PAD 206

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +A        L  KK+   +   +A +D IE         GV +E ++F EL+      G
Sbjct: 207 DAAAFDAARALWQKKSRGEVAPLRA-IDAIEAATKMDLDEGVREERRIFLELMETPQRAG 265

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FF  R  +K+P +   G+ PR +  V VIGGG MG+GIATA +L+ + V L E ++
Sbjct: 266 LIHAFFNDRKVAKLPEIE--GIAPRNMAHVGVIGGGTMGAGIATACLLSGLSVTLIERDA 323

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
               K   TI AN+   V RGKL  D+ +  L  L  V DY+E  D D+ IEAV E + +
Sbjct: 324 AAADKARGTITANLDAAVKRGKLPADRRDATLSQLSTVTDYAELSDCDLAIEAVFEDMAV 383

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K ++F+ L+    P  ILATNTS +D+N +   T     +IG HFFSPAHVM LLE+V  
Sbjct: 384 KHEVFARLDAVMKPGAILATNTSYLDVNEIAAATRRPSDVIGLHFFSPAHVMKLLEVVVA 443

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           + T+A V      + K + K+ V  G C GF  NR    Y  +A  ++  G   + ID+A
Sbjct: 444 DATAADVTATAFALAKRLGKIAVRAGVCDGFIGNRMLATYRGAADRMILDGASPWEIDAA 503

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I++FGLP+GPF++ DLAG  +   T K        R       D +   G  G+  G+G 
Sbjct: 504 IKAFGLPMGPFEMSDLAGLDIGFMTRKRKAATRDPRDVVPTWADAMYHEGWLGQKTGQGY 563

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPI-SVTEKEIVEMILFPVVNESCRVLE 479
           Y +E G K  P+ +V P+IE  R       G +P  + T +EI  + +  +VNE+ +VL 
Sbjct: 564 YVHE-GRKATPNEAVKPLIEAAR-------GDRPQRTFTPEEIQRVYMAAMVNEAAKVLG 615

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I  R  D+D   + G  FP +RGG + WAD VG   + T + +WS+    F++P+  L
Sbjct: 616 EEIARRPLDVDVTLLYGYGFPRWRGGPMQWADTVGLPALLTDINEWSKADPYFWQPAPLL 675

Query: 540 EERATKG 546
           E+  T+G
Sbjct: 676 EQLVTEG 682


>gi|254251314|ref|ZP_04944632.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
 gi|124893923|gb|EAY67803.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia dolosa AUO158]
          Length = 710

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 182/547 (33%), Positives = 277/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  +++E   LGL+D +  S++ L     +A ++ +   P  R+    D L   +
Sbjct: 161 LMLTGRHASADEALALGLVDRIAQSDDTLAEGLAYAHELVSLDAPPRRT-RDADGLSDRA 219

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D IE  +     +G+  E  +F + V      G
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAIEAALTQPFDAGMKLERSLFLQCVDSPQRAG 279

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +KVP       +P  V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 280 LVHAFFAEREAAKVPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L+ L G   Y      D+VIEAV E + +
Sbjct: 338 ASLARGRAHVEKVYDGLVAKGRMTPAARAARLERLTGSTSYDALAQADVVIEAVFEDMTV 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPAHVM LLEIV  
Sbjct: 398 KKAVFAELARVCKPRAMLATNTSYLDIDELAASIDRPADVIGLHFFSPAHVMKLLEIVVP 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R  A+V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 458 ARVDAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  A  K        R+    + D L + G  G+  G+G 
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWAARKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+   R    I+    P + T+ EI+   L  ++NE   V+ 
Sbjct: 578 YLYPDGARVGTPDPDVDAIVAHERAKKGIV----PRTFTDDEILRRYLAAMINEGANVVH 633

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFADEDPLFWKPSPLL 693

Query: 540 EERATKG 546
            E   +G
Sbjct: 694 VELVERG 700


>gi|121608757|ref|YP_996564.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
 gi|121553397|gb|ABM57546.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Verminephrobacter eiseniae EF01-2]
          Length = 699

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 175/511 (34%), Positives = 274/511 (53%), Gaps = 15/511 (2%)

Query: 40  AARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGY 99
           AAR  P +R+L          E +   + AR   K  + N P    C+D +E        
Sbjct: 196 AARPLPLVRNLPCRH-----PEGQAYFQFARNMVKGMSRNFPAPALCVDAVEAATRGPFA 250

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            G+  E  +F +L+    SR L H+F A+RA SK+P+V     + R +R VAVIG G MG
Sbjct: 251 DGMQIERAIFMKLMQTPESRALRHLFMAERAASKIPDVPSDTPR-RDIRAVAVIGAGTMG 309

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
            GIA   +   + V + E+  + L +G+ TI  N    V +GKLTQDK    + +L   L
Sbjct: 310 GGIAMNFLNAGLPVKILEMKPQALERGLATIGKNYEAQVKKGKLTQDKYQQRMALLSTTL 369

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY++ +D D+VIEAV E + +K+ +F +L+    P  ILA+NTST+D++ +   T     
Sbjct: 370 DYADIRDADLVIEAVFEDLGVKESVFRQLDAQMKPGAILASNTSTLDIDKIATFTGRPQD 429

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA+VM LLE+VR + T+  V+  +M + K I+K  VV G C GF  NR    
Sbjct: 430 VVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIAKKIRKTAVVAGVCDGFIGNRMIEQ 489

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
           YS+ A  L+  G    ++D AI  FG  +GPF++ DLAG  +  A  K       +  + 
Sbjct: 490 YSRQAGFLLDEGCTPEQVDKAIEKFGFAMGPFRMGDLAGNDIGWAIRKRRAVERAEMKY- 548

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP-IIEECRRLSNIMPGGKPISVT 458
           S   D L + GR G+    G Y Y+ G +     +++  +IEE R+   I     P  + 
Sbjct: 549 SRTSDKLCELGRFGQKTAAGWYDYQAGKRDAIASALVHRMIEEHRQQLGI----TPRKIA 604

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           ++EIV+ ++F +VNE  R+LE+GI  ++ D+D   + G  FP +RGG + +A  +G   V
Sbjct: 605 DEEIVQRLVFALVNEGARILEDGIASKSGDIDMVYITGYGFPMHRGGPMRYASELGLFNV 664

Query: 519 YTSLKKWSQLYGN---FFKPSRFLEERATKG 546
             ++ ++++   +   F++P+  L   A +G
Sbjct: 665 VQAMGRFARNPHDDAAFWQPAPLLARLAAQG 695


>gi|221211110|ref|ZP_03584089.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
           multivorans CGD1]
 gi|221168471|gb|EEE00939.1| peroxisomal bifunctional enzyme (pbe) (pbfe) [Burkholderia
           multivorans CGD1]
          Length = 710

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 181/547 (33%), Positives = 280/547 (51%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +A ++ +   P  R+      L   +
Sbjct: 161 LMLTGRHASAEEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRT-RDAQALADRA 219

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAG 279

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +KVP       +P  + ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 280 LVHAFFAEREAAKVPEARRGTARP--IERIGVVGGGTMGAGIAIAALDAGLPVTMIERDE 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E     LV +G++T       +  LKG   Y     VD+VIEAV E + +
Sbjct: 338 AALARGRAHVEKVYDALVAKGRMTSAAQAARIARLKGSTSYDALAQVDVVIEAVFEDMAV 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 398 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + + +KK+PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 458 ARASADVVATAFALARQLKKMPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+  G+G 
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTGRGY 577

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+E+ R    I+    P + T+ EI+   L  ++NE   V+ 
Sbjct: 578 YLYPDGARVGTPDPEVEAIVEQERAKKGIV----PRAFTDDEILRRYLAAMINEGANVVH 633

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG +  AD VG   V   ++ +++    F+KPS  L
Sbjct: 634 EKIALRPLDVDAVFLHGYGFPRYRGGPMHHADTVGLANVLADIRAFAEEDPLFWKPSPLL 693

Query: 540 EERATKG 546
            E   +G
Sbjct: 694 VELVERG 700


>gi|399993437|ref|YP_006573677.1| fatty acid oxidation complex subunit alpha [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
 gi|398657992|gb|AFO91958.1| fatty acid oxidation complex subunit alpha [Phaeobacter
           gallaeciensis DSM 17395 = CIP 105210]
          Length = 706

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 187/560 (33%), Positives = 282/560 (50%), Gaps = 22/560 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-WALDIA----ARRKPWIRSLHRTDK 55
           M+L    +  E     GL+DA+  +++  +   L +A  ++     +R     ++   D 
Sbjct: 151 MILSGDPVKGEYALSCGLVDALFENDQDFRAHVLGFATRVSHEGDPKRSCADMTVRHPDP 210

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
            G L+  R+       Q   T+ N+   + CL  IE         G+ +E   F EL+  
Sbjct: 211 KGYLTGFRD-------QIAHTSKNLVAPERCLVSIEAACEMPLAEGLEQEKAGFAELLDT 263

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
             SR   H+FFA+R  +KVP VT    +PR +  VAVIG G MG GIA A +     V L
Sbjct: 264 PQSRAGRHLFFAERECTKVPGVTRAD-RPRDIASVAVIGAGTMGRGIAIAFLQAGYPVTL 322

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E     L +G++ +  + +    +G+L+ D+A        G L Y+     D++IEA  
Sbjct: 323 LETTQGALEQGLEKVREHFQRAAQKGRLSADRAEAISANATGTLSYAGLAKADLIIEAAF 382

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           ES+ +K++IF  L+    P  ILA+NTST+DL+ +   TS  + +IG HFFSPA+VM LL
Sbjct: 383 ESMNVKRQIFEALDLHAKPGAILASNTSTLDLDEIATVTSRPEDVIGLHFFSPANVMRLL 442

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E+VR  +T+  VI   +TV K I+K+PV VG C GF  NR   PY +    L+  G    
Sbjct: 443 EVVRGAKTAPDVIATAITVAKKIRKLPVTVGVCYGFVGNRMLEPYFREGSRLLLEGATPK 502

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
           ++D  +  FG+ +G   + DLAG  V A   +E             + D L + GR G+ 
Sbjct: 503 QVDDVLEGFGMAMGIHAMADLAGVDVGARVRQERRSEIAHDPTYQAVQDRLFELGRLGQK 562

Query: 416 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
            G+G Y YE G     DP ++ I  E   L  +    K   + ++EI+E  LFP++NE  
Sbjct: 563 TGRGSYVYE-GRTRVEDPEMVQISSELADLHGV----KRRDIDDQEILERCLFPLINEGF 617

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--- 532
            +LEEGI  R  D D   V G  FP++RGG + +AD +G + +   +  + Q  G +   
Sbjct: 618 LILEEGIATRPGDCDLIWVNGYGFPNWRGGPMHYADEIGLSQIMERMTHYRQSLGAYGEM 677

Query: 533 -FKPSRFLEERATKGIPLSA 551
            F P+  LE+ AT G+ L A
Sbjct: 678 WFTPAPLLEQLATSGVTLDA 697


>gi|170747490|ref|YP_001753750.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654012|gb|ACB23067.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Methylobacterium
           radiotolerans JCM 2831]
          Length = 680

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 182/550 (33%), Positives = 291/550 (52%), Gaps = 22/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGSL 59
           MML  + +++E+   LG++DAVV  + L+  +R  AL++A A   P +R   R+DKL   
Sbjct: 140 MMLTGEPVSAEKAAALGIVDAVVLGD-LVAEARTRALELADAGTLPRVRD--RSDKL--T 194

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
            EARE  +    +A K  P+     A    +  G+     + V  E   F+ LV    S+
Sbjct: 195 PEARERFEAQATEAVKRDPDATNVHALARAVRAGLEQDFDAAVAVERAEFRALVEDPRSK 254

Query: 120 GLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            L + FFA+R  ++VP +  D   +P  +R  AVIG G MG GIA       I V + E 
Sbjct: 255 ALRYAFFAEREAARVPGLPKDTPRRP--IRTAAVIGAGTMGGGIAMCFANAGIPVTVIET 312

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
               L +G+  ++A   G   RG +T+ +    +  + G +     ++ D+V+EA  E +
Sbjct: 313 EEGALTRGLDRVKALYAGSAKRGSITEAQREERVGRITGAIGLEHAREADIVVEAAFEDM 372

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ IFSEL++   P  ILATNTS +D+N +   T+    ++G HFFSPA+VM L+E+V
Sbjct: 373 GVKRGIFSELDQIAKPGAILATNTSYLDVNAIAAVTNRPQDVLGLHFFSPANVMRLVEVV 432

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+T+ +V+   + +GK + K+PV VG C GF  NR     S++   L+  G     +D
Sbjct: 433 RAEKTAPEVLATALDLGKRLNKLPVAVGVCFGFVGNRMLERRSRAGERLLLEGALPHEVD 492

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
           +A+  FG  +GPF + DLAG  +   + K+F         ++P+ D L + GR G+  G+
Sbjct: 493 AAVTGFGFRMGPFAMGDLAGLDIGWRSRKDF-------GGRAPVADSLAEQGRFGQKTGR 545

Query: 419 GLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y Y  G++    DP V  +I        +       S T   IV  +++P+VNE  R+
Sbjct: 546 GFYLYPDGARTGTRDPEVEALIARVAAEHGV----ARRSFTADAIVARLMYPMVNEGARI 601

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK-PS 536
           LEEGI  R  D+D   + G ++P++RGG + WAD VG   +  +L +++   G+  + P+
Sbjct: 602 LEEGIAARPGDIDTIWINGYNWPAWRGGPMHWADTVGLKTIAEALTRFAAETGDDSQEPA 661

Query: 537 RFLEERATKG 546
             L+  A +G
Sbjct: 662 PLLKRLAAEG 671


>gi|158424497|ref|YP_001525789.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
 gi|158331386|dbj|BAF88871.1| enoyl-CoA hydratase [Azorhizobium caulinodans ORS 571]
          Length = 691

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 187/548 (34%), Positives = 281/548 (51%), Gaps = 18/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MM   + +++E+   +GL+D +   + L+  +   AL +A     W RS     K  +  
Sbjct: 152 MMAGGEPVSAEKARAMGLVDDIADGD-LVATAATQALRLA-EAGTWPRSGAAESKFSA-- 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E R   + A   A + +P MP   A    +  G+  G   G+  E   F ELV   TS+ 
Sbjct: 208 EDRAAFETAASDAIRKSPRMPNVAALAHAVRVGLEKGLAEGLAAERAAFLELVKDPTSKA 267

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R  ++VP +    +K R V   AVIG G MG GIA       I V L EV  
Sbjct: 268 LRHLFFAEREAARVPGIGKE-VKARPVASAAVIGAGTMGGGIAMCFAQAGIPVTLIEVKE 326

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L  G+  I +N    V RG LT +K    L  + G +      + D+V+EA  E + +
Sbjct: 327 EALSAGLARIRSNYETSVKRGSLTSEKMERHLGFITGRVGLEAAAEADIVVEAAFEDMGV 386

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K +IF  L++   P  ILATNTS +D+N + E T     ++G HFFSPA+VM LLEIVR 
Sbjct: 387 KAEIFGALDRLAKPGAILATNTSYLDVNAIAETTKRPQDVVGLHFFSPANVMRLLEIVRG 446

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T+  V++  + + + I K+PVVVG C GF  NR     +Q+A  L+  G     +D A
Sbjct: 447 AKTAPDVLVTSLDLARKIGKLPVVVGVCYGFVGNRMLAKRTQAAERLLLAGAMPHEVDDA 506

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG  +GPF + DLAG  +     K           ++P+ D L + G  G+  G+G 
Sbjct: 507 VTDFGFRMGPFAMSDLAGLDIGWRARKA-------TGAKAPVADALAEQGFFGQKTGRGF 559

Query: 421 YTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G+ K + DP    +I    RLS+   G    S + +EI+  +++P+VNE  ++LE
Sbjct: 560 YRYPEGARKGERDPDTEALIT---RLSDER-GITRRSFSREEIIARLMYPMVNEGAKILE 615

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRF 538
           EGI  R+SD+D   V G ++P++ GG + WA+ VG   +  +L   +   G +  KP+  
Sbjct: 616 EGIASRSSDVDVVWVNGYNWPNFTGGPMHWAEGVGLARIVEALDALAAETGDDSLKPAAL 675

Query: 539 LEERATKG 546
           L   A  G
Sbjct: 676 LRRLAQGG 683


>gi|418528630|ref|ZP_13094578.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           ATCC 11996]
 gi|371454384|gb|EHN67388.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           ATCC 11996]
          Length = 705

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 171/548 (31%), Positives = 284/548 (51%), Gaps = 9/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSL 59
           +ML  + I ++ G   GL+D      + +     +A ++ A+  P +R +  T  +L   
Sbjct: 157 LMLSGQQIGAKAGLAAGLVDKPDDGTDPVAAGLAYARELLAQGAP-LRPVSATPGRLADK 215

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           + A+  L   R    K +  +      +D ++  +      G+  E   F   +      
Sbjct: 216 AAAQAELDALRADTAKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERTQFLACIDSPQRA 275

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           GL+H FFA+R T+K+P       +PR   K+A+IGGG MG+GI  + +   + V + E +
Sbjct: 276 GLIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERD 333

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           +E + +G   +E    GL+ +G+++++     L        Y E  DVD+VIEAV E + 
Sbjct: 334 AESIARGQANVEKVYNGLIAKGRMSEEAKAAILARYTPSTRYDEIADVDLVIEAVFEDLE 393

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F EL++ C    +LATNTS +D++ +   TS    +IG HFFSPA++M LLEIV 
Sbjct: 394 VKKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVV 453

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             + +  V+     + + +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID 
Sbjct: 454 PAKVAPDVVTTAFELARKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDE 513

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R FG  +GPFQ+ DLAG  +  AT K        ++    + D + + G  G+  G+G
Sbjct: 514 AVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICEQGWFGQKTGRG 573

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y +G++  +PDP VL I++  R    + P  +P   T +EI+   +  +VNE  +V+
Sbjct: 574 FYLYPQGARIGQPDPEVLAIVDAERAKKGVTP--RPF--TAEEIMRRYMAAMVNEGAKVV 629

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
            EGI +R  D+D   + G  FP +RGG + WAD  G + V   ++ +++    F+KP+  
Sbjct: 630 GEGIALRPLDVDVTFISGYGFPRHRGGPMKWADMQGLDKVLADIEAFAKEDALFWKPAPL 689

Query: 539 LEERATKG 546
           L++   +G
Sbjct: 690 LQKLVAEG 697


>gi|400753263|ref|YP_006561631.1| fatty acid oxidation complex subunit alpha [Phaeobacter
           gallaeciensis 2.10]
 gi|398652416|gb|AFO86386.1| putative fatty acid oxidation complex subunit alpha [Phaeobacter
           gallaeciensis 2.10]
          Length = 748

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 159/449 (35%), Positives = 249/449 (55%), Gaps = 8/449 (1%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            GV +E ++F +L+  D  +GL+H FF++RA SK+P + D    PR V  + VIGGG MG
Sbjct: 295 DGVRQERELFMKLMESDQRQGLIHAFFSERAVSKLPELVDA--SPRDVAAMGVIGGGTMG 352

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGV 218
           +GIATA +L  + VVL E +    +   + IE N+RG + RGK++Q + +  L + LK  
Sbjct: 353 AGIATAALLAGLSVVLVERDEAASVAARERIEGNLRGALKRGKISQSQFDAILNETLKLA 412

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
            DY+    VD+V+EAV E + +K+ +F+ L++ C P  ILA+NTS +D+N +   TS   
Sbjct: 413 TDYAALSQVDLVVEAVFEDMDVKRDVFAALDEHCKPGAILASNTSYLDINDIAAATSRPS 472

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
            +IG HFFSPAHVM LLE+V  ++T+  V+     +GK +KK  V    C GF  NR   
Sbjct: 473 DVIGLHFFSPAHVMKLLEVVVADQTAPDVVATGFALGKRLKKTSVRSDVCDGFIGNRIMN 532

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
            Y ++A  +V  G   +++D  +  FG  +GPF + DLAG  +  A  K        R  
Sbjct: 533 SYRKAADYMVLDGASPYQVDKVMTGFGFAMGPFAVADLAGLDIGWAARKRRAPTLDPRER 592

Query: 399 QSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISV 457
                D+L + G  G+  G+G Y YE+G +   P+P V   IE  +R   + P       
Sbjct: 593 VVHFSDMLCEGGDFGQKTGRGFYVYEEGKRGGTPNPQVAEYIERDQRDQGVTPQ----IF 648

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
              E++   +  +VNE+ +V+ EGI  R  D+D   + G  FP + GG + WAD  G + 
Sbjct: 649 ANDEVLRRYMCAMVNEAAKVVGEGIARRPLDVDMVLLFGYGFPRFWGGPLKWADLQGLDS 708

Query: 518 VYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           +   ++++++    F++P+  LE+   +G
Sbjct: 709 ILKDIRRYAKEDAFFWQPAPLLEQMVAEG 737


>gi|206559114|ref|YP_002229874.1| putative trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
           cenocepacia J2315]
 gi|444370153|ref|ZP_21169838.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           cenocepacia K56-2Valvano]
 gi|198035151|emb|CAR51025.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
           3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
           dehydrogenase] [Burkholderia cenocepacia J2315]
 gi|443597878|gb|ELT66281.1| enoyl-CoA hydratase/isomerase family protein [Burkholderia
           cenocepacia K56-2Valvano]
          Length = 707

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 276/547 (50%), Gaps = 9/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D V  S++ L     +A ++ +   P +R       L   +
Sbjct: 159 LMLTGRHASAEEALALGLVDRVAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLADRT 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 218 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMKFERSLFLQCLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P       +P  V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 278 LVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y     VD+VIEAV E + +
Sbjct: 336 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQVDVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +       D +IG HFFSPA+VM LLEIV  
Sbjct: 396 KQAVFAELARVCKPGAVLATNTSYLDIDALASIDRPAD-VIGLHFFSPANVMKLLEIVVP 454

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R S  V+     + + +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 455 ARVSPDVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 514

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K         +    + D L + G  G+  G+G 
Sbjct: 515 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 574

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ E R    I     P + T+ EI+   L  ++NE   V+ 
Sbjct: 575 YLYPDGARVGTPDPEVEAIVAEERAKKGIT----PRTFTDDEILRRYLAAMINEGANVVH 630

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD +G   V   ++ +++    F+KPS  L
Sbjct: 631 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTLGLANVLADIRTFAKDDPLFWKPSPLL 690

Query: 540 EERATKG 546
            +   +G
Sbjct: 691 VDLVARG 697


>gi|295699700|ref|YP_003607593.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1002]
 gi|295438913|gb|ADG18082.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1002]
          Length = 705

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 176/552 (31%), Positives = 284/552 (51%), Gaps = 8/552 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + + E   LGLID +  S ++L     +A  +   R P +R       L   +
Sbjct: 156 LMLSGRHVGANEAHALGLIDRIGASGDVLAEGLAYARSLLTTRAP-VRRACDARGLADRA 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +R  ++ AR++    + ++      +D ++  +      G+  E ++F + +      G
Sbjct: 215 ASRAAIEAARVEVSTKSRHLFSPIKIVDAVQAALEMSFDDGLRHERQLFLQCLDSPQRAG 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+RA  K P       KPR +  V VIGGG MG+GIA A +   + V + E + 
Sbjct: 275 LVHAFFAERAAQKAPETRKA--KPRAIASVGVIGGGTMGAGIAVALLDAGLSVTMIERDD 332

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L  G   +E   + L+ +G++T       L    G   Y     VD+VIEAV E + +
Sbjct: 333 ASLAYGRANVEKVYKALIAKGRMTSQAKAALLARFDGSTSYDALHAVDLVIEAVFEDMAV 392

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K  +F+EL++ C P  +LATNTS +D++ +    S    +IG HFFSPA++M LLE+V  
Sbjct: 393 KHAVFAELDRVCKPGAVLATNTSYLDIDAIAASVSRPADVIGLHFFSPANLMKLLEVVVP 452

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K ++KVPV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 453 AQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRVLAIYRAAADHMMEDGASPYQIDRA 512

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ+ DLAG  +  AT K        +     + D + + G  G+  G+G 
Sbjct: 513 VREFGFPMGPFQVSDLAGGDIGWATRKRRAATRDAKLRYVQIADRICERGWFGQKTGRGY 572

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++  +PDP V  II+  R  +NI P     + T+ EI+   +  ++NE   V+ 
Sbjct: 573 YLYADGARIGQPDPDVEAIIDAERERANITPR----TFTDHEIMRRYMAAMINEGANVVH 628

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI +R  D+D   + G  FP +RGG + +AD+VG   V   ++++++    F++PS  +
Sbjct: 629 EGIALRPLDVDVTFLHGYGFPRHRGGPMKYADSVGLANVLADIREFAKEDPVFWQPSPLI 688

Query: 540 EERATKGIPLSA 551
            E   +G  L++
Sbjct: 689 VELVERGATLAS 700


>gi|163793451|ref|ZP_02187426.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
 gi|159181253|gb|EDP65768.1| Enoyl-CoA hydratase [alpha proteobacterium BAL199]
          Length = 702

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 182/550 (33%), Positives = 282/550 (51%), Gaps = 13/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + +  EE   LG++DA++ ++++      +A  + A     + +L   D+ G L+
Sbjct: 152 MITSGRHVPVEEAADLGIVDAIIDTKDVKAAGIAFAQRVIAE---GLTALPVRDRDGKLA 208

Query: 61  EAR---EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           EAR    V   AR + +K+A  +     C+D +E  +      G+ +E ++F++ +    
Sbjct: 209 EARADRSVFADARKKLEKSARGLFSPFRCVDAVEAAVDLPIDDGLKRERELFQQCMESPQ 268

Query: 118 SRGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
               +HVFF +R  +KVP ++ DI  +P  V K AVIG G MG GIA       I V + 
Sbjct: 269 RAAQIHVFFGEREVAKVPGMSKDITARP--VNKAAVIGAGTMGGGIAMCFANAGIPVTVV 326

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E   + L +G+  + +N      RG++T D     + ++   LD ++  D D++IEAV E
Sbjct: 327 ETAQDALDRGLNRVRSNYDISAKRGRMTPDDVEARMALITPSLDLADLHDADLIIEAVFE 386

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
           S+ +K+++F++L+K   P  +LATNTS +D++ +   TS    ++G HFFSPA+VM LLE
Sbjct: 387 SLDVKKEVFAKLDKIAKPGAVLATNTSYLDVDAIAAMTSRPADVLGMHFFSPANVMRLLE 446

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +VR  +T    +   + VG+   KV VV G C GF  NR    Y      L+  G     
Sbjct: 447 VVRGAKTDDDALRTALEVGRKFGKVAVVSGVCDGFIGNRMLRTYKTQMDYLLEDGALPQE 506

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           ID+AI  FG P+G + + DLAG  +   T +  D   P  +    + D L + GR G+  
Sbjct: 507 IDAAITGFGFPMGLYAMGDLAGLDIGYMTRRREDATRPADARYVAIADRLYEKGRLGQKT 566

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           G G Y YE G  P PDP V  II E  +   I    +P +V   EI    L  +VNE  +
Sbjct: 567 GAGWYRYEDGRTPIPDPEVDAIILEESQKKGI--NRRPFTV--DEIQTRALCALVNEGAK 622

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           VL EGI +R  D+D   + G  FPS+ GG +FWAD  G   V   ++ ++      + P+
Sbjct: 623 VLGEGIALRPVDIDMVWLFGYGFPSWEGGPMFWADRRGLAKVLADIRGFADHDPKSWVPA 682

Query: 537 RFLEERATKG 546
             L E A  G
Sbjct: 683 PLLVELAEAG 692


>gi|421870892|ref|ZP_16302521.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
           cenocepacia H111]
 gi|358069221|emb|CCE53399.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxybutyryl-CoA epimerase [Burkholderia
           cenocepacia H111]
          Length = 720

 Score =  288 bits (736), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 179/547 (32%), Positives = 275/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D V  S++ L     +A ++ +   P +R       L   +
Sbjct: 171 LMLTGRHASAEEALALGLVDRVAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAHGLADRT 229

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 230 AAQAAIDAARAELPKRSRGLFSPAKIVDAVEAALTQSFDAGMKFERSLFLQCLDSPQRAG 289

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P       +P  V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 290 LVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 347

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y     VD+VIEAV E + +
Sbjct: 348 ASLTRGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQVDVVIEAVFEDMAV 407

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 408 KQAVFAELARVCKPGAVLATNTSYLDIDALAASIDRPADVIGLHFFSPANVMKLLEIVVP 467

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R S  V+     + + +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 468 ARVSPDVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 527

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K         +    + D L + G  G+  G+G 
Sbjct: 528 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPNARYVEISDRLCERGWFGQKTGRGY 587

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ E R    I     P + T+ EI+   L  ++NE   V+ 
Sbjct: 588 YLYLDGARVGTPDPEVDAIVAEERAKKGIT----PRTFTDDEILRRYLAAMINEGANVVH 643

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD +G   V   ++ +++    F+KPS  L
Sbjct: 644 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTLGLANVLADIRTFAKDDPLFWKPSPLL 703

Query: 540 EERATKG 546
            +   +G
Sbjct: 704 VDLVARG 710


>gi|410446988|ref|ZP_11301090.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
           bacterium SAR86E]
 gi|409979975|gb|EKO36727.1| enoyl-CoA hydratase/isomerase family protein [SAR86 cluster
           bacterium SAR86E]
          Length = 719

 Score =  288 bits (736), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 176/550 (32%), Positives = 300/550 (54%), Gaps = 20/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALD-IAARRKPWIRSLHRTDKLGSL 59
           MM+    I++++  + G+IDA+ +   L++    +  D I     P +R   + +KL   
Sbjct: 156 MMIAGTPISAKKALQQGVIDAI-SENSLIEDGIAFLQDKITLSEHPKVRD--KNEKLLEA 212

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTS 118
             A  +L  A+  A KT          +  +E  I    +  G+ KE++ F E ++    
Sbjct: 213 RGADNILAEAKALAAKTRRGQFAPGQIISCVEAAINEDDFDIGMKKESEYFLECLVHPQR 272

Query: 119 RGLVHVFFAQRATSKV---PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
             ++H+FF +RA SK+   P  T +      +    V+G G MG GIA       I V++
Sbjct: 273 EAMIHIFFGERAASKISDIPKETPL----HQINSAGVVGSGTMGGGIAMNFANAGIPVLI 328

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + + + L +G+  IE N + +V RG+++QD+ +  ++++   L Y +  DVD+V+EAV 
Sbjct: 329 LDQDEKNLSRGMGVIEKNYQMMVDRGRMSQDQKDTVMQIITPTLSYEDLADVDIVVEAVY 388

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E++ LKQ+IF  L+ A     ILA+NTS +D++ +   T+  ++++G HFFSPA+VM LL
Sbjct: 389 ENLELKQEIFKSLDTAVNDQAILASNTSGLDIDAIASSTNRPNKVVGTHFFSPANVMRLL 448

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E+VR  ++S + +  +M +GK + K  VV  N  GF  NR  + Y+  A +L+  G    
Sbjct: 449 EVVRGSKSSDETMATVMALGKKMGKASVVSLNAPGFIGNRMLYGYTYQANMLLLEGALPN 508

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
           +IDSA+ SFG+ +GPF+++DL G  +     K      P     + + D L +  R G+ 
Sbjct: 509 QIDSALESFGMSMGPFRMMDLVGLDLGWRARKLGGIETP---LTNKISDALCEQDRFGQK 565

Query: 416 NGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
           N KG Y Y +GS+ P P P    I +E    +NI    +   ++++EI++  +F +VNE 
Sbjct: 566 NSKGFYNYSEGSRAPNPAPENESIYKEVSEKNNI----QRREISDQEIIDRCIFALVNEG 621

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            ++LEEG+  RA D+D   + G  FP +RGG +F+A+  G   V   + ++++L  NF+K
Sbjct: 622 AKILEEGVSQRAGDMDIVYINGYGFPIWRGGPMFYANQFGLGKVVEKINEFAELDKNFWK 681

Query: 535 PSRFLEERAT 544
           P+  LE+ A+
Sbjct: 682 PAPMLEKLAS 691


>gi|170700585|ref|ZP_02891585.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           IOP40-10]
 gi|170134491|gb|EDT02819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           IOP40-10]
          Length = 693

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 186/557 (33%), Positives = 293/557 (52%), Gaps = 31/557 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRS--LHRTDKLG 57
           M++  + + SE+    GL D ++  + L    R +A   A R + P +R   +   +  G
Sbjct: 152 MIVSGRIVRSEKLADTGLFDLIIEGDLLTGAVR-FAQQAADRNELPRLRDRRIEHVNPDG 210

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
            L  AR  +  A       + N P    C+D ++  +      G+  E K+F EL+    
Sbjct: 211 FLQFARNTIATA-------SRNFPAPFKCVDAVQASVQQAFDDGIKFERKLFMELMDTSE 263

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKP----RGVRKVAVIGGGLMGSGIATAHILNNIYV 173
           SR L H FF +RA +K+P+     L P    R V +VAV+G G MG+GIA   +   + V
Sbjct: 264 SRALRHAFFGKRAGAKIPD-----LPPDTPVRTVTQVAVVGAGTMGAGIAMNFLSAGLQV 318

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            + E   + L +G+  I  N      +GKLTQ++    + +L   L Y + +  D++IEA
Sbjct: 319 TILETRQDALERGVAAIRKNYDDNARKGKLTQEQVEQRMSLLTPTLSYDDLRHADLIIEA 378

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + +K+ +F EL+       ILA+NTST+D++ +   T     ++G HFFSPA+VM 
Sbjct: 379 VFEEMSVKESVFRELDAVAKHGAILASNTSTLDVDKIAAFTKRPCDVVGMHFFSPANVME 438

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLE+VR E+T+  V+  +M++ + I K  VV G C GF  NR    Y + A  L+  G  
Sbjct: 439 LLEVVRGEKTAHDVLATVMSLARKIGKTAVVSGVCDGFIGNRMINQYLRQAGYLLDEGAL 498

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
             +ID AI  FG  +GPF++LDL+G  +  A  K      PD  + S    LL + GR G
Sbjct: 499 PEQIDRAIEKFGFAMGPFRMLDLSGNDIVWAIHKRHAVERPDIVY-SKTTHLLCEMGRFG 557

Query: 414 KANGKGLYTYEKGSKPKPDPSVL---PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           + +G G Y Y+ G + K  PS+     I+++ R +     G +   +++ EIVE +++ +
Sbjct: 558 QKSGAGWYDYKAGDR-KAYPSLAVNDMIVQQSRDI-----GLERRVISDDEIVERLVYAL 611

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY- 529
           VNE  R+LEEGI  +ASD+D   + G  FP +RGG +F+AD VG   V  + +++ + Y 
Sbjct: 612 VNEGARILEEGIASKASDIDVVYLTGYGFPVFRGGPMFYADTVGLYNVAQATRRYGKGYR 671

Query: 530 GNFFKPSRFLEERATKG 546
           G  ++ +  LE  A  G
Sbjct: 672 GEAWQTAPLLERLAEVG 688


>gi|148553751|ref|YP_001261333.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
 gi|148498941|gb|ABQ67195.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Sphingomonas wittichii RW1]
          Length = 678

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 186/550 (33%), Positives = 281/550 (51%), Gaps = 34/550 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + +  +LGL+D V     L++ +  WA  IA RR      L RT +     
Sbjct: 150 MIVSGDPIPAGKAAELGLVDHVAAEGSLIEEAHRWAQVIAGRR-----PLPRTGERPVAG 204

Query: 61  EAREVLKLARLQAKK----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
           +A  + + A   A+K    TAP     QAC + +   I      G+  E  +F++LV  D
Sbjct: 205 DAAAIDRYAETHARKLRGQTAP-----QACFEALRAAIDLPLAEGLAVERGLFRQLVAGD 259

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
            S  L H FFA+R  +++  + D  ++P  +  V VIG G MG+GIA A +   + VVL 
Sbjct: 260 QSAALRHYFFAERRAARIDGL-DASIEPLPIETVGVIGAGTMGAGIAMAFLSKGLRVVLL 318

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E  ++ L +G+  I       V +G++TQ+  + AL  L   LDY+     D++IEAV E
Sbjct: 319 ETGADALDRGLANIRRTYEASVAKGRMTQEAGDQALARLSTTLDYAALGGCDLIIEAVFE 378

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +K+++F+ ++    P  ILATNTS +D++ +   T   D ++G HFFSPA++M LLE
Sbjct: 379 LMAVKREVFARIDAVARPGAILATNTSYLDIDEIAAATGRPDHVVGLHFFSPANIMKLLE 438

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +VR  RTS +V+   M + K I K+ VV GN  GF  NR        A  L+  GV  + 
Sbjct: 439 VVRGARTSPRVLATAMALAKRIGKIAVVAGNGYGFIGNRLLARRRSEAFELLLEGVAPWD 498

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           ID A   FG+P+GPF++ DLAG  +             D +    + D L  +GR G+  
Sbjct: 499 IDEAHVGFGMPMGPFRMSDLAGVDIG---------WHRDPARVENVRDALCAAGRLGQKA 549

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG Y Y++  +  P    L II+   R      G     V   +I+E  L+ +V+E  R
Sbjct: 550 GKGYYDYDEARQATPSAEALAIIDAFARGQ----GRARRDVPRDDILERTLYAMVDEGAR 605

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           +L EGI  RASD+D   V G  +PSY GG + WA+  G  ++   L+     +G    P 
Sbjct: 606 LLAEGIAQRASDIDVVWVNGYGWPSYLGGPMHWAERTGLAHIVERLRA----HGMPVAP- 660

Query: 537 RFLEERATKG 546
             L E+A +G
Sbjct: 661 -LLAEKAARG 669


>gi|320165951|gb|EFW42850.1| peroxisomal bifunctional enzyme [Capsaspora owczarzaki ATCC 30864]
          Length = 720

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 259/468 (55%), Gaps = 18/468 (3%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            G+ KE ++   L+    +  L H+FFA+R    VP +     KP  VR V V+G G MG
Sbjct: 259 QGMAKEYELVVNLMKGPQASALQHLFFAEREVGTVPGLNPSLAKP--VRSVGVLGAGTMG 316

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
           +GIA   +   I VVL +   E+L +G+  I A     V +GKLT++     L +L   L
Sbjct: 317 AGIAMVFLNAKIPVVLLDTKQEFLDRGLAGIRAVYASDVKKGKLTEEALAKRLALLTPTL 376

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY+ F +VD+ IEAV E++ +K+++F++L+  C P  ILA+NTST++++ +   T   ++
Sbjct: 377 DYAAFANVDLAIEAVFENMDIKKQVFAKLDAVCKPEAILASNTSTLNIDEMAAATKRPEQ 436

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
            IG HFFSPA+VM LLE VR +++S   I  +M + K IKKV V+VGNC GF  NR    
Sbjct: 437 FIGTHFFSPANVMRLLENVRGKKSSPSTIATVMALSKTIKKVGVLVGNCDGFVGNRMLEG 496

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKA 392
           Y++ A  ++  G    ++D  + SFG+ +GPFQ+ DLAG  V          T+     A
Sbjct: 497 YAREASFMLEEGALPAQVDKVLTSFGMAMGPFQMGDLAGNDVGWRIRQGKGMTNPATRPA 556

Query: 393 FPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPG 451
              R  +  L D L + GR G+  G G Y YE+G  K  PD +V  +IE       I   
Sbjct: 557 KEGRYCE--LGDKLCELGRFGQKAGAGWYKYEQGQRKAIPDDAVAKLIEAHSSSKGI--- 611

Query: 452 GKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD 511
               S++++EI E  ++P++NE  +VLEEGI +R  D+D     G  FP YRGG +  A 
Sbjct: 612 -ARRSISDEEIFERCMYPLINEGFKVLEEGIALRPGDIDIIWAYGYGFPRYRGGPMHVAQ 670

Query: 512 AVGANYVYTSLKKWSQLY--GNFFKPSRFLEERATKGIPLSAPVSSSS 557
            +G   +YT+L K+S+ +   + F PS+ L+  A     L   +++ S
Sbjct: 671 TIGLKKIYTALAKYSKQFPTSHHFVPSKLLQTLAETNTTLEQHLATKS 718


>gi|319793843|ref|YP_004155483.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
           paradoxus EPS]
 gi|315596306|gb|ADU37372.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
           paradoxus EPS]
          Length = 701

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 166/476 (34%), Positives = 260/476 (54%), Gaps = 10/476 (2%)

Query: 79  NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 138
           N P    C+D ++         G+ +E ++F  L+    S  L H+F A+RA SK+P+V 
Sbjct: 232 NYPAPLMCIDAVQAATKMKFDQGMAEERRIFTALMFTPESLALRHLFMAERAASKIPDVP 291

Query: 139 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 198
           +   K R +  V VIG G MG GI+   +   I V + E+  E L +G+ TI+ N    V
Sbjct: 292 EDTPK-REINSVGVIGAGTMGGGISMNFLNAGIPVKILEMKQEALDRGVATIKKNYEAQV 350

Query: 199 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 258
            +GKL +DK    + +L   L Y + KD D++IEAV E + +K+K+F EL++      IL
Sbjct: 351 KKGKLKEDKYAQRMALLSTTLSYDDLKDADLIIEAVFEEIGVKEKVFKELDRVAKKGAIL 410

Query: 259 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 318
           A+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR + T+  V+  +M +GK I
Sbjct: 411 ASNTSTLDVDKIASFTERPQDVVGMHFFSPANVMKLLEVVRGKATAKDVLATVMAIGKKI 470

Query: 319 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 378
           KK  VV G C GF  NR    YS+ A  L+  G    ++D AI  FG  +GPF++ DLAG
Sbjct: 471 KKTSVVSGVCDGFIGNRMIEQYSRQAGFLLDEGATPQQVDKAIEKFGFAMGPFRMGDLAG 530

Query: 379 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLP 437
             +  A  K       D  + S   D L + GR G+  G G Y Y+ G +   P   V  
Sbjct: 531 NDIGWAIRKRRATERADMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSDLVNK 589

Query: 438 IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 497
           +IE+ R+   I     P  ++++EIV+ +++ +VNE   +LE+GI  ++ D+D   + G 
Sbjct: 590 MIEDHRKELGIT----PRKISDEEIVQRLVYALVNEGAHILEDGIASKSGDIDMVYLTGY 645

Query: 498 SFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKGIPLS 550
            FP +RGG + +A  VG   V  S+K++++       F++P+  +++   +G   S
Sbjct: 646 GFPIWRGGPMHYASQVGLYNVAESMKRFAKNPRDDAEFWQPAPLIQKLVAEGKSFS 701


>gi|327309822|ref|YP_004336720.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326955157|gb|AEA28853.1| 3-hydroxybutyryl-CoA epimerase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 703

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 175/542 (32%), Positives = 282/542 (52%), Gaps = 14/542 (2%)

Query: 7   SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA-ARRKPWIRSLHRTDKLGSLSEAREV 65
           ++ +    +LG+IDA V  +++L  +  +  D   A  +P      R D L   +     
Sbjct: 169 TVPAPRAAELGMIDACV-DDDVLDAALAYLDDTGVAGAQP------RLDDLPPPAAGDAD 221

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
              AR + + +  N     A +D +E         G+  E   F  L+    ++ L H F
Sbjct: 222 FAAARRRVRPSTRNGVAQLAAIDCVEAATQLPIEEGLPLERASFLRLLESTEAKALRHTF 281

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           FA++  +KV ++ D  ++PR V ++AVIG G MG+GIA A   + + V L E +   L +
Sbjct: 282 FAEKQAAKVLDI-DRSVQPRPVERIAVIGAGTMGTGIAMAFANSGLAVDLIEQDRAALER 340

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           GI+ ++ N      + +L   +    L ++   LD       D+V+EAV E + +K+ +F
Sbjct: 341 GIELVQRNYEATAAKRRLDAVQVEQRLALITPSLDLDVVAQADLVVEAVFEDMAVKKDVF 400

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
           ++L+    P  +LA+NTS +D++ +    S    +IG HFFSPAHVM LLE+VR E T+ 
Sbjct: 401 AKLDAIAKPGAVLASNTSRLDIDELARSVSRPRDVIGLHFFSPAHVMKLLEVVRGESTAD 460

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            VI   M V ++I KVPV+   C GF  NR   PY + A  L+  G+   R+D A+ +FG
Sbjct: 461 DVIATSMAVARLINKVPVLSKVCEGFIGNRMLTPYRREADFLLEEGMTPERVDRALETFG 520

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY-E 424
           L +GPF++ DLAG  +  A  K            S + D+L ++GR G+  G G Y Y E
Sbjct: 521 LAMGPFRMSDLAGLDIGWAARKRLAPTRDTSLRYSRVADVLCEAGRFGQKTGAGYYRYAE 580

Query: 425 KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
              KP  DP V  II +C     +    +   +T+ EIV+  +  +VNE  R+L +G+  
Sbjct: 581 DSRKPVADPVVEQIIRQCAEEDGV----ERREITDAEIVDRCMLALVNEGARILGDGVAQ 636

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
           RASD+D   + G  FP+YRGG +++A+ +G   V   ++ +   +G ++ P+  LE+R  
Sbjct: 637 RASDIDVVYIDGYGFPAYRGGPMYYAETLGLAEVLRRIQTFEAAHGAYWAPAPLLEQRVA 696

Query: 545 KG 546
           +G
Sbjct: 697 EG 698


>gi|86140265|ref|ZP_01058826.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Roseobacter sp. MED193]
 gi|85823068|gb|EAQ43282.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Roseobacter sp. MED193]
          Length = 697

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 164/449 (36%), Positives = 255/449 (56%), Gaps = 9/449 (2%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+ +E ++F EL+  D  +G++H FF++RA SK+P +   G+ PR +  + VIGGG MG+
Sbjct: 244 GMKRERELFMELMNTDQRQGMIHAFFSERAVSKLPELK--GVAPRELGSIGVIGGGTMGA 301

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN-ALKMLKGVL 219
           GIATA +L+ + VV+ E+           I  N++G + RGK+++ +      ++L    
Sbjct: 302 GIATAALLSGLPVVMLEMTEAAAEAAKGRITGNLQGALKRGKISEAQFTQLTEEILTLST 361

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY+   DVD+VIEAV E + +K+ +F +L++ C    ILA+NTS +D+N +   TS  + 
Sbjct: 362 DYAALSDVDLVIEAVFEEMSVKKVVFGKLDEVCKKGAILASNTSYLDVNEIAACTSRPED 421

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           +IG HFFSPAHVM LLEIV  ++T+  V+     +G+ +KK+ V  G C GF  NR    
Sbjct: 422 VIGLHFFSPAHVMKLLEIVVADKTALDVVATGFALGQRLKKISVRAGVCDGFIGNRILST 481

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK-EFDKAFPDRSF 398
           Y ++A  ++  G   ++ID A+  FG  +GPF + DLAG  +  A  K +  +    R  
Sbjct: 482 YRKAADHMILDGASPYQIDKALTDFGFAMGPFAVADLAGLDIGWAMRKRKRAEGMDPRER 541

Query: 399 QSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISV 457
            S  VD + ++G  G+  GKG Y YE G +   P+P V  +I   R    I     P S 
Sbjct: 542 DSSYVDKMCEAGNFGQKTGKGYYVYEAGKRGGTPNPEVSDLIAAERADKGIT----PRSF 597

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
           T++EIV   +  +VNE+ +V+ EGI  R  D+D   + G  FP YRGG + WAD  G + 
Sbjct: 598 TDEEIVTRYMAAMVNEAAKVVGEGIARRPLDVDMTLLFGYGFPRYRGGPLKWADIEGLDK 657

Query: 518 VYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           V  ++K  ++    F+ P+  LE+   +G
Sbjct: 658 VLATIKAGAEEDSYFWDPAPLLEKLVAEG 686


>gi|90423729|ref|YP_532099.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas
           palustris BisB18]
 gi|90105743|gb|ABD87780.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Rhodopseudomonas palustris BisB18]
          Length = 697

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 182/548 (33%), Positives = 290/548 (52%), Gaps = 17/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I + E  + GLID +V  E        +A  + A ++   R      KL +  
Sbjct: 152 MIVGGDPIGAAEALQHGLIDEIV--EATAAGGEAFARKVLAEQRGLRRLRDDDSKLQAAK 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R +   A     K A  +    A  D +   I      G+ +E   F +LV  + S+ 
Sbjct: 210 TDRSIFTQAVASMTKKARGLEAPFAAADAVGAAIDLPFDEGLKQERDGFMKLVTGEQSKA 269

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             + FFA+R  +KV +V D G KPR V +VA+IG G MG GIA +     I V L E   
Sbjct: 270 QRYAFFAEREAAKV-SVPD-GTKPRPVARVAIIGAGTMGGGIAMSFANAGIPVTLIETGE 327

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           + L +G+  ++ N      RG +  D     + ++ GV+     KD D+VIEAV E++ +
Sbjct: 328 QQLKRGLGVMQKNYDATAARGGIPADAPAKRMALINGVVGLEHVKDADLVIEAVFETMAV 387

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F+ ++    P  +LA+NTS ++++ + + T   + ++G HFFSPA+VM L EIVR 
Sbjct: 388 KKEVFTAIDAYAKPGAVLASNTSYLNIDEIAQVTKRPEDVLGMHFFSPANVMKLCEIVRA 447

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++T+   +L  + + + I KVP VVG C GF  NR      + A  L+  G    ++D+ 
Sbjct: 448 DKTAPDALLTAVAIARKIAKVPAVVGVCDGFVGNRMLAARGKQAERLLFEGALPQQVDAV 507

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG+P+GPF + DLAG  +   + K       DR  +S + D L ++GR G+  GKG 
Sbjct: 508 VTKFGMPMGPFAMGDLAGLDIGWRSRK-------DRGIKSEIADALCEAGRFGQKTGKGY 560

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE GS+ P PDP V  +I +   LS +  G K   V+++EI+E +++P++NE  R+LE
Sbjct: 561 YKYEAGSRAPLPDPEVEALINDT--LSKL--GLKRREVSDEEILERMMYPMINEGARILE 616

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRF 538
           EGI  R SD+D   + G  +P YRGG +++AD VG  +V   L  +++   +   +P+  
Sbjct: 617 EGIAARPSDIDVIWLYGYGWPIYRGGPMYYADQVGLKHVAERLSYYAKATNDPTLEPAPL 676

Query: 539 LEERATKG 546
           L   A +G
Sbjct: 677 LARLAAEG 684


>gi|187923916|ref|YP_001895558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
 gi|187715110|gb|ACD16334.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
           phytofirmans PsJN]
          Length = 694

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 177/528 (33%), Positives = 278/528 (52%), Gaps = 13/528 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+    GL D +   + L + +  +A  ++A+  P  +     D+     
Sbjct: 152 MIVSGAPVMSEKLADSGLFDELAQGD-LAEAALAFARKVSAKEGPHPKV---RDRKIEHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A N P    C+D +E G+  G   G+  E + F  LV    S  
Sbjct: 208 NAAGFIQFARNTVATMAKNFPAPLKCIDAVEAGVQKGFDKGLAFERECFMALVQTPESHA 267

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           L H FF +RA SK+P+V +D  +  R + +VAVIG G MG GIA   I   I V L E  
Sbjct: 268 LRHAFFGERAASKIPDVPSDTPV--RDIGQVAVIGAGTMGGGIAMNFINAGIPVTLLETK 325

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N    V +GKL  +     + ++   L Y + K+ D+++EAV E + 
Sbjct: 326 QEALDRGLATIRKNYEATVKKGKLKPEVLGQRMALITPTLSYDDLKNADLIVEAVFEELG 385

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K++ F  L++      ILA+NTST+D++ +   T     ++G HFFSPA+VM LLE+VR
Sbjct: 386 VKEQAFKRLDEVAKQGAILASNTSTLDVDKIAAFTKRPQDVVGMHFFSPANVMKLLEVVR 445

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  V+  +M + K IKK  VV G C GF  NR    Y + A  ++  G    ++D 
Sbjct: 446 GKETAKDVLATVMNLAKKIKKTAVVSGVCDGFIGNRMVEQYIRQALFMLEEGALPAQVDK 505

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AI  FG  +GPF++ DLAG  +  A  K      PD  + S + D L ++GR G+  G G
Sbjct: 506 AIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYLEHPDMHY-SKIADRLCETGRFGQKTGGG 564

Query: 420 LYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y+ G +   P   V  +I    + ++     +   ++++EIVE ++F +VNE  ++L
Sbjct: 565 WYDYKAGDRTAYPSKVVDDMIVAFSKETDT----ERRKISDEEIVERLVFALVNEGAKIL 620

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           EEGI  +ASD+D   + G  FP YRGG + +AD VG   V  ++++++
Sbjct: 621 EEGIASKASDIDMVYLTGYGFPLYRGGPMLYADTVGLYNVERAIRRYA 668


>gi|78067690|ref|YP_370459.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. 383]
 gi|77968435|gb|ABB09815.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia sp. 383]
          Length = 710

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 177/547 (32%), Positives = 276/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + ++++E   LGL+D V  S++ L     +A ++ +   P +R       L   +
Sbjct: 161 LMLTGRHVSADEALALGLVDRVAHSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLVDRA 219

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 220 AAQAAIDAARAELPKKSRGLFSPAKIVDAVEAALTQSFDAGMAFERSLFLQCIDSPQRAG 279

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P       +P  V ++ V+GGG MG+GIA + +   + V + E + 
Sbjct: 280 LVHAFFAEREAAKAPESRRASARP--VERIGVVGGGTMGAGIAVSALDAGLPVTMIERDE 337

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 338 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGGTSYDALAQADVVIEAVFEDMAV 397

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 398 KKAVFAELARVCKPGAVLATNTSYLDIDELAASIDRPADVIGLHFFSPANVMKLLEIVVP 457

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 458 ARVSADVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 517

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+   +G 
Sbjct: 518 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTARGY 577

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ E R    +     P + T+ EI+   L  ++NE   V+ 
Sbjct: 578 YLYPDGARVGTPDPEVETIVAEERAKKGVT----PRTFTDDEIMRRYLAAMINEGANVVH 633

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ +++    F+KPS  L
Sbjct: 634 EKIALRPLDVDAVFLYGYGFPRYRGGPMHYADTVGLANVLADIRTFAKEDPLFWKPSPLL 693

Query: 540 EERATKG 546
            +   +G
Sbjct: 694 VDLVARG 700


>gi|126739002|ref|ZP_01754698.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Roseobacter sp. SK209-2-6]
 gi|126720183|gb|EBA16890.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Roseobacter sp. SK209-2-6]
          Length = 698

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 163/452 (36%), Positives = 256/452 (56%), Gaps = 15/452 (3%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+ +E ++F EL+  D   GL+H FF++RA SK+P +   G++PR +  + VIGGG MG+
Sbjct: 245 GLKRERELFMELMNSDQRLGLIHAFFSERAVSKLPELK--GVEPRQLASIGVIGGGTMGA 302

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK----ANNALKMLK 216
           GIATA +L+ + VV+ E++ E        I  N++G + RGK+++++       AL +  
Sbjct: 303 GIATAALLSGLSVVMLEMSEEAAAAAKGRIAGNLQGALKRGKISEEQFAQLTEEALSLAT 362

Query: 217 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 276
           G   Y    DVD+VIEAV E + +K+++F +L+  C    ILA+NTS +D+N +   TS 
Sbjct: 363 G---YEALSDVDLVIEAVFEEMSVKKEVFGKLDAVCKKGAILASNTSYLDVNEIAAATSR 419

Query: 277 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 336
            + +IG HFFSPAHVM LLE+V  ++T+  V+     +GK +KK+ V  G C GF  NR 
Sbjct: 420 PEDVIGLHFFSPAHVMKLLEVVVADKTALDVVATGFELGKRLKKISVRAGVCDGFIGNRI 479

Query: 337 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK-EFDKAFPD 395
              Y ++A  +V  G   ++ID A+  FG  +GPF + DLAG  +  A  K +  +    
Sbjct: 480 LATYRKAADHMVLDGASPYQIDKALTEFGFAMGPFAVADLAGLDIGWAVRKRKRAEGMDP 539

Query: 396 RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKP 454
           R   S   D + ++G  G+  GKG Y YE G +   P+P V  +I   R    I     P
Sbjct: 540 RDRDSSYADKMCEAGNFGQKTGKGYYVYEAGKRGGTPNPEVSDLIAAERAEQGIT----P 595

Query: 455 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 514
            + T++EI+   +  +VNE+ +V+ EGI  R  D+D   + G  FP YRGG + WAD  G
Sbjct: 596 RAFTDEEILNRYMAAMVNEAAKVVGEGIARRPLDVDMTLLFGYGFPRYRGGPLKWADIQG 655

Query: 515 ANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +  ++K +++    F++ +  LE    +G
Sbjct: 656 LDKILNNIKSYAEEDAYFWEAAPLLETLVAEG 687


>gi|387814500|ref|YP_005429986.1| bifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
 gi|381339516|emb|CCG95563.1| bifunctional enzyme (PBE) (PBFE) [Includes: Enoyl-CoA hydratase ;
           3,2-trans-enoyl-CoA isomerase ; 3-hydroxyacyl-CoA
           dehydrogenase ] [Marinobacter hydrocarbonoclasticus ATCC
           49840]
          Length = 699

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 192/563 (34%), Positives = 291/563 (51%), Gaps = 18/563 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS---EELLKVSR-LWALDIAARRKPWIRSLHRTDKL 56
           +M   + + +E+  +LGLID V+     E  L  +R   A  +  RR   IR +      
Sbjct: 149 LMTSGEKVPAEQARELGLIDRVLEGDLREGALNYARDCLAGGLGVRR---IRDMQIPVDS 205

Query: 57  GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
           G     ++ L   R Q  K        Q  +D +E  +      G+  E   F E    D
Sbjct: 206 GD----QQTLDAYRNQLAKRKRGQEAPQRIVDCVEIALNRPFDEGLAFERSQFVECTQSD 261

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
            S  L H+FFA+R   KVP++ D     R + +V +IG G MG GIA A     I V+L 
Sbjct: 262 QSAALRHLFFAERKALKVPDL-DPEAHARDISRVGIIGAGTMGGGIAMAFANAGIPVMLL 320

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E+N E L +G+  I  N    V+RGKL+  +A +   ++ G ++Y +   VD+VIEAV E
Sbjct: 321 ELNQEGLDRGLTLISENYGRSVSRGKLSTSEAASRKALITGSINYEDLAKVDLVIEAVFE 380

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
           S+ +K+++F  L++ C P  ILATNTS +D+N +   TS    ++G HFFSPA++M LLE
Sbjct: 381 SMDVKKQVFQRLDEVCRPGTILATNTSYLDVNEIASATSRPGDVVGLHFFSPANIMKLLE 440

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +VR E+T+  VI   M +GK ++KVPV+   C GF  NR    Y++ A+L +  G    +
Sbjct: 441 VVRAEQTADDVIATAMALGKRLRKVPVLSRVCYGFIGNRMLRQYAKEAQLCMIEGATPEQ 500

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           ID A+  FG+ +GP  + DLAG  +     +              + D L++SGR G+  
Sbjct: 501 IDGALTDFGMAMGPLAVGDLAGLDIGYKARQALTSEQKGDPRTYCIADALVESGRLGQKT 560

Query: 417 GKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G G Y Y+  ++ +  DP V  +I+  R  S    G      T++EI +  +  +VNE  
Sbjct: 561 GAGYYRYDPDTRARYSDPQVSEVIK--REASRY--GVSQRLFTKEEIQDRHILSLVNEGF 616

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFK 534
           R+LEEGI  R  D+D   V G  FPSYRGG +F+A   G   V+  L+  +   G  ++K
Sbjct: 617 RILEEGIAQRPGDIDLVYVHGYGFPSYRGGPMFYASQRGLGSVFDRLEALAASSGELYWK 676

Query: 535 PSRFLEERATKGIPLSAPVSSSS 557
           P+ FL+    +G  L   ++S +
Sbjct: 677 PAPFLKRLVEQGQTLEEWMASRT 699


>gi|393778010|ref|ZP_10366298.1| multifunctional 3-hydroxybutyryl-CoA epimerase
           /delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
           dehydrogenase [Ralstonia sp. PBA]
 gi|392715061|gb|EIZ02647.1| multifunctional 3-hydroxybutyryl-CoA epimerase
           /delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA
           dehydrogenase [Ralstonia sp. PBA]
          Length = 699

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 190/553 (34%), Positives = 290/553 (52%), Gaps = 23/553 (4%)

Query: 1   MMLLSKSITSEEGWKLG--LIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLG 57
           M++  K++T+     LG  L D VV  E +L  +   A ++A  R  P +R     D+  
Sbjct: 156 MIVTGKTVTAA---ALGAPLFDRVVDGE-VLSAALALAQEVADSRPLPRVR-----DRQV 206

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
            L  A    + AR   +  +PN+P    C+D +   +      G+ KE  +F EL     
Sbjct: 207 KLPGADAFFQHARRIVQARSPNLPAPLKCVDAVAAALEPFDI-GLPKERAMFVELSRSRE 265

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           +R L H FFA+R   K+P +   G + R V+  AVIG G MG GIA       I V L+E
Sbjct: 266 ARALQHGFFAEREAPKIPALP-AGTQARDVQAGAVIGAGTMGGGIAMNFANAGIPVWLRE 324

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            + E L +G+  I  N      +G+LT  +    + +++  L Y++    D+VIEAV E 
Sbjct: 325 TSQEALDRGLGIIRRNYEASAKKGRLTDAQVEQRMALIRPTLQYADIAQADVVIEAVFED 384

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +K+ +F  L++   P  ILATNTST+D+N +   T     ++G HFFSPA+VM LLE+
Sbjct: 385 WGVKETVFRTLDEVMKPGAILATNTSTLDVNRIAAFTRRPQDVVGLHFFSPANVMRLLEV 444

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           V+   T+  VI   M + K   KV V+ G C GF  NR    Y + A  L+  G    ++
Sbjct: 445 VQGAATAPDVIATAMALAKRFSKVGVLSGVCDGFIGNRMLDRYIRQAHFLLEEGALPEQV 504

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D A+  FG+ +GP ++ D+ G  +  A  K     +PD++F + + D L ++GR G+  G
Sbjct: 505 DRALEKFGMAMGPCRMNDMVGNDIGWAIRKRRYVEYPDQAF-ARVADPLCEAGRLGQKAG 563

Query: 418 KGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           KG Y YE G + P PDP V  +IE       I        ++++EIVE  +F +VNE  R
Sbjct: 564 KGWYRYEPGKRDPIPDPEVRALIEAYSAQHGI----TRRRISDQEIVERTVFALVNEGAR 619

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL---YGNFF 533
           +LEEGI  RASDLD   + G  FP++RGG + +A++VG   V  +++ ++      G F+
Sbjct: 620 LLEEGIAQRASDLDAVFLTGYGFPAFRGGPMHYAESVGLFNVLRTIRGYAARGVGGGAFW 679

Query: 534 KPSRFLEERATKG 546
            P+  LE   ++G
Sbjct: 680 TPAPLLERCVSEG 692


>gi|154252397|ref|YP_001413221.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Parvibaculum
           lavamentivorans DS-1]
 gi|154156347|gb|ABS63564.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Parvibaculum
           lavamentivorans DS-1]
          Length = 692

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 178/551 (32%), Positives = 285/551 (51%), Gaps = 16/551 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+     + +++  ++GL+D +    +L   +  +A  I A ++P  R    +DK+ +  
Sbjct: 155 MVTSGSHVGAKKCLEMGLVDELTEEGKLRDGAIAFAKKIVAEKRPLKRVRDLSDKVEAAR 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+    R    +        +  +  IE  +      G+  E K+F+ELV    S  
Sbjct: 215 GKPEIFSEFRKANARKFRGFLAPEYNIQCIEAAVNLPFDEGIKVEQKLFRELVTGTQSAA 274

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             HVFFA+R   K+P+V  D    P  V KV +IG G MG GIA   +   + V + E  
Sbjct: 275 QRHVFFAERQVWKLPDVPADTPTIP--VNKVGIIGAGTMGGGIAMNFLNVGLPVTIVETK 332

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +GI TI  N      +G+ + ++    + +L G L+     D D+VIEAV E++ 
Sbjct: 333 QEALDRGIATIRKNYENSAKKGRFSMEEVEKRMGLLTGSLEMEALADSDLVIEAVFENMD 392

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++FS+L+       ILATNTS ++++ +       + +IG HFFSPA+VM LLE+VR
Sbjct: 393 VKKQVFSKLDAIVKQGAILATNTSALNIDEIATAVKRPEAVIGLHFFSPANVMRLLEVVR 452

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            ++TS  VI   M + K I K+  +VG C GF  NR      + A+ L+  G   + +D 
Sbjct: 453 ADKTSKPVIATSMQLAKKIGKIAALVGVCPGFVGNRILAQRQREAQKLILEGAMPWDVDR 512

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FGLP+GPF + DLAG  +    SKE       +S  + + D+L +  R G+  G G
Sbjct: 513 VLYDFGLPMGPFAMSDLAGLDI--GWSKE-------KSQGATIRDVLCEMDRRGQKTGAG 563

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++    KP P V  II +  +   I        +++ EI+E  ++P++NE  ++LE
Sbjct: 564 FYDYDENRNAKPSPVVEKIILDFAQKKGI----NRRKISDDEILERCIYPMINEGAKILE 619

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG  +R+SD+D   + G  FP YRGG +F+ D VGA+ V   +K++    G+ FKP+  L
Sbjct: 620 EGKAIRSSDIDIVWINGYGFPVYRGGPMFYGDTVGADKVLAKMKEFQAQMGDDFKPAALL 679

Query: 540 EERATKGIPLS 550
           E+   +G   S
Sbjct: 680 EKIVAEGKKFS 690


>gi|239813853|ref|YP_002942763.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Variovorax paradoxus
           S110]
 gi|239800430|gb|ACS17497.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Variovorax paradoxus
           S110]
          Length = 711

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/550 (31%), Positives = 286/550 (52%), Gaps = 14/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  +   ++E   LGL+D +    +       +A ++ A + P    + RT + G L+
Sbjct: 162 LVLSGRHAGAKEALSLGLVDRLGNEADARAEGLAYAQELVAAKAP----VRRTREAGGLA 217

Query: 61  E---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           +   +R  L+ AR    + +  +      ++ +E  +      G+  E K+F + +    
Sbjct: 218 DKEASRAALEAARADTARKSRGLFSPMKIIEAVEAALTLPFDEGMALERKLFLQCIDSPQ 277

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
             GL+H FFA+R   K P        PR +    ++GGG MG+GIA A +   + V + E
Sbjct: 278 RAGLIHAFFAEREVLKAPETRSAA--PRALASAGIVGGGTMGAGIAVAMLDAGLPVTMIE 335

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            +   L +G + +E    GL+ +G++T +     +    G   Y     VD+V+EAV E 
Sbjct: 336 RDEPSLARGRQHVEKVYDGLIKKGRMTPEAKTAVMARFSGSTSYDALAQVDIVVEAVFED 395

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ +F+EL++ C    +LATNTS +D++ + E  S    ++G HFFSPA++M LLEI
Sbjct: 396 MGVKKAVFAELDRVCKRGAVLATNTSYLDIDEIAESISRPQDVVGLHFFSPANIMKLLEI 455

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           V   + SA V+     + K +KKVPV  G C GF  NR    Y Q+A  ++  G   ++I
Sbjct: 456 VVPAKVSADVVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYQI 515

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D A+R+FG P+GPFQ+ DLAG  +  AT K        ++    + D + + G  G+   
Sbjct: 516 DEAVRNFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPQARYVQIADRICERGWFGQKTQ 575

Query: 418 KGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           +G Y Y +G++  +PDP VL II+  R  + I     P + TE+EI+   +  ++NE   
Sbjct: 576 RGYYLYPEGARTGQPDPEVLAIIDAERERAGIT----PRTFTEEEIMRRYMAAMINEGAN 631

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           V+ + I +R  D+D   + G  FP +RGG + +AD VG   V   ++++++    F+KPS
Sbjct: 632 VVLQRIALRPLDVDVTFLYGYGFPRHRGGPMKYADTVGLPKVLADIREFAKEDPIFWKPS 691

Query: 537 RFLEERATKG 546
             L E A +G
Sbjct: 692 PLLVELAERG 701


>gi|398812024|ref|ZP_10570805.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
 gi|398079241|gb|EJL70108.1| 3-hydroxyacyl-CoA dehydrogenase [Variovorax sp. CF313]
          Length = 711

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/547 (31%), Positives = 281/547 (51%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +   ++E   LGL+D +    + L     +A ++ A + P +R       L    
Sbjct: 162 LMLSGRHADAKEALSLGLVDRLGNDADALAEGLAYAQELVAAKAP-VRRTREAAGLVDTE 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +R  L+ AR    K +  +      ++ +E  +      G+  E K+F + +      G
Sbjct: 221 ASRAALEAARADTAKKSRGLFSPMKIIEAVEGALTLPFDEGMALERKLFLQCIDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R   K P       KPR +    ++GGG MG+GIA A +   + V + E + 
Sbjct: 281 LIHAFFAEREVLKAPETK--AAKPRALESAGIVGGGTMGAGIAVAMLDAGLPVTMIERDE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G + +E    GL+ +G++T +     +    G   Y    +VD+V+EAV E + +
Sbjct: 339 PSLARGRQHVEKVYDGLIAKGRMTPESKAAVMARFNGSTSYDALANVDIVVEAVFEEMGV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL++ C    +LATNTS +D++ + +  S    ++G HFFSPA++M LLEIV  
Sbjct: 399 KKAVFAELDRVCKRGAVLATNTSYLDIDEIADSISRPQDVVGLHFFSPANIMKLLEIVVP 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K +KKVPV  G C GF  NR    Y Q+A  ++  G   + ID+A
Sbjct: 459 AKVSADVVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYEIDAA 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R+FG P+GPFQ+ DLAG  +  AT K        ++    + D + + G  G+   +G 
Sbjct: 519 VRNFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPQARYVQVADRICERGWFGQKTQRGY 578

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G++   PDP VL II+  R    +  G  P   TE+EI+   +  ++NE   V+ 
Sbjct: 579 YLYPEGARTGVPDPEVLAIIDAER----VRAGITPRQFTEEEIMRRYMAAMINEGANVVL 634

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           + I +R  D+D   + G  FP +RGG + +AD VG   V   ++++++    F+KPS  L
Sbjct: 635 QRIALRPLDVDVTFLYGYGFPRHRGGPMKYADTVGLPKVLADIREFAKDDPLFWKPSPLL 694

Query: 540 EERATKG 546
            E   +G
Sbjct: 695 VELVERG 701


>gi|424863887|ref|ZP_18287799.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [SAR86 cluster bacterium SAR86A]
 gi|400757208|gb|EJP71420.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [SAR86 cluster bacterium SAR86A]
          Length = 717

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 183/569 (32%), Positives = 300/569 (52%), Gaps = 24/569 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA--ARRKPWIRSLHRTDKLGS 58
           MML    I +++   +G++D++  SE +++ S  +A++ A  + + P +R L+       
Sbjct: 152 MMLTGGHIPAKKALDMGIVDSI--SENVVEDSIKFAIEKAESSEQHPKVRDLNE-----K 204

Query: 59  LSEAR---EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVM 114
           + EAR   ++L  A+  A K           +  +E  I    +  G+ KE ++F E ++
Sbjct: 205 MIEARGNDKILLEAQAMAAKGRKGQFAPGQIIKCVEAAINLDDFDEGLKKEGELFLECLL 264

Query: 115 LDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 173
                 ++H+FF +RA SK+ +V  D  +K   ++K  +IG G MG GIA       I V
Sbjct: 265 HPQREAMIHIFFGERAASKISDVPKDTPVKE--IKKAGIIGSGTMGGGIAMCFANAGIPV 322

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            + + + E L +G+  IE N   +V +G+LT ++ +    ++   L+Y +  D D+VIEA
Sbjct: 323 HIIDQDEENLKRGVSVIEKNYDFMVGKGRLTSEQKDAVFGLVTSSLEYEDISDCDIVIEA 382

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E++ LK +IF  L+    P  ILA+NTS +D++ +   T   + ++G HFFSPA++M 
Sbjct: 383 VYENLELKHEIFKTLDSVVKPEAILASNTSGLDIDSIAAVTKRPELVVGTHFFSPANIMR 442

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLE+VR E TS + +  +M VGK +KK  VV  N  GF  NR  F Y+  A +L+  G  
Sbjct: 443 LLEVVRGEVTSDETLATVMAVGKKLKKAAVVSLNAPGFIGNRMLFGYTAQANMLLLEGAL 502

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
             +ID A+ SFGL +GPF+++DL G  +     K   K  P     + + D L +  R G
Sbjct: 503 PHQIDQALESFGLNMGPFRMMDLVGLDLGWRARKLSGKESP---LHAKIGDELCEQNRYG 559

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           + NG G Y Y +GS+    P+  P  EE     +   G     ++++EIV+  +  ++NE
Sbjct: 560 QKNGAGYYNYTEGSRA---PNAAPENEELYERISQENGFTRREISDEEIVDRCILALINE 616

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-F 532
              +L EG+  RA D+D   + G  FP +RGG +  A+A+G + V   L K+ +L GN  
Sbjct: 617 GANILSEGVAQRAVDIDVVYINGYGFPIWRGGPMHHANAMGLDVVVEKLNKYKELTGNDV 676

Query: 533 FKPSRFLEERATKGIPL-SAPVSSSSTSR 560
           +KPS  L   A   + +  AP  +    +
Sbjct: 677 YKPSELLVSLAENNLKMGDAPAKADRKEK 705


>gi|392951320|ref|ZP_10316875.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
 gi|391860282|gb|EIT70810.1| hypothetical protein WQQ_09470 [Hydrocarboniphaga effusa AP103]
          Length = 712

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/547 (32%), Positives = 287/547 (52%), Gaps = 11/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L    +   +  +LG++D +V  + LL  +  +A  I A  +P   +    DK+ +  
Sbjct: 168 MILSGTPVNGTKALELGIVDELVDGD-LLAGAIAFARKIVAEGRPLRVTSQLQDKVANTD 226

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A  +   A  + +K    +      ++ ++         G   E KV++E       + 
Sbjct: 227 PA--IFADAIKKNEKKWKGLLSPYKIVEAVQAACTLPFAEGAALELKVYRETQASPQRKA 284

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L ++FFA+R  +K+P+V    LKP  V+  AVIG G MG GIA +     I V + E+  
Sbjct: 285 LTYMFFAEREAAKIPDVPR-DLKPAPVKSAAVIGAGTMGGGIAMSFANAGIPVKILELKQ 343

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L  G+  I+ N    V+RG  TQ + +  L  +    DY++  D D+V+EAV E++ +
Sbjct: 344 EALDAGLARIKGNYATSVSRGSTTQAQMDERLGRISTTTDYAQIGDADIVVEAVFENMEI 403

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F  L+       IL TNTST+D++ +   T     +IG HFFSPA+VM L+E VR 
Sbjct: 404 KQGVFKTLDGVMKQGAILGTNTSTLDIDQIANVTKRPQDVIGMHFFSPANVMKLVENVRG 463

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +TS ++I   M V K I KVPV+ GNC GF  NR    Y +    L+  G   ++ID+A
Sbjct: 464 AKTSPEIIGRTMAVSKQIGKVPVLAGNCDGFIGNRILAAYGRECDFLLEEGATPWQIDTA 523

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ-SPLVDLLLKSGRNGKANGKG 419
           ++ FG P+G F + D+AG  V     +++ + F D++ + SP+ D + + GR G+  G G
Sbjct: 524 LQGFGFPMGLFLMRDMAGLDVGWRI-RQYREQFRDKNQRYSPVGDRICELGRYGQKTGAG 582

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y YE G    PDP +  +I +      I    +   V+++EIV  +L  +VNE  +++ 
Sbjct: 583 YYKYE-GRNATPDPEIEALIVKVSADLGI----ERRKVSDEEIVWRVLSVMVNEGAKIVG 637

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI +RASD+D   V G  FP ++GG +FWA+  G + V   ++ +    G+ +KP+  L
Sbjct: 638 EGIAIRASDIDVTYVFGYGFPRHQGGPMFWAEQQGLDKVLAKIRAYHAEQGDNWKPAELL 697

Query: 540 EERATKG 546
           E+    G
Sbjct: 698 EKIVAAG 704


>gi|449470586|ref|XP_004152997.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like [Cucumis sativus]
          Length = 501

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 138/244 (56%), Positives = 183/244 (75%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE + LGL+DA+V  EEL+  +R WALDI+ RRKPWI SLH+T+KL SL+
Sbjct: 228 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 287

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +ARE+ K AR Q +K APN+     C+DV+E G+V G  +G+ KE + F+ L+  DTS+ 
Sbjct: 288 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 347

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 348 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 407

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  FKDVDMVIEAVIE++ L
Sbjct: 408 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 467

Query: 241 KQKI 244
           KQ+I
Sbjct: 468 KQQI 471


>gi|221065494|ref|ZP_03541599.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           KF-1]
 gi|220710517|gb|EED65885.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Comamonas testosteroni
           KF-1]
          Length = 705

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 170/548 (31%), Positives = 284/548 (51%), Gaps = 9/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSL 59
           +ML  + I ++ G   GL+D +    + +     +A ++ A+  P +R +  T  +L   
Sbjct: 157 LMLSGQQIGAKAGLAAGLLDKLDDGADPVVAGLAYARELLAQGAP-LRPVSATPGRLADK 215

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           + A+  L   R    K +  +      +D ++  +      G+  E   F   +      
Sbjct: 216 AAAQAELDALRADTAKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRA 275

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           GL+H FFA+R T+K+P       +PR   K+A+IGGG MG+GI  + +   + V + E +
Sbjct: 276 GLIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERD 333

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           +E + +G   +E    GL+ +G+++++     +        Y +  DVD+VIEAV E + 
Sbjct: 334 AESIARGQANVEKVYNGLIAKGRMSEEAKAAIMARYTPSTRYDDIADVDLVIEAVFEDLE 393

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F EL++ C    +LATNTS +D++ +   TS    +IG HFFSPA++M LLEIV 
Sbjct: 394 VKKAVFKELDRVCKRGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVV 453

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             + +  V+     + K +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID 
Sbjct: 454 PAKVAPDVVTTAFELAKKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDE 513

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R FG  +GPFQ+ DLAG  +  AT K        ++    + D + + G  G+  G+G
Sbjct: 514 AVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICEQGWFGQKTGRG 573

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y +G++  +PDP VL I++  R    + P  +P   T +EI+   +  +VNE  +V+
Sbjct: 574 FYLYPQGARIGQPDPEVLAIVDAERAKKGVAP--RPF--TAEEIMRRYMAAMVNEGAKVV 629

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
            EGI +R  D+D   + G  FP +RGG + WAD  G   V   ++ +++    F+KP+  
Sbjct: 630 GEGIALRPLDVDVTFISGYGFPRHRGGPMKWADMQGLPKVLADIEAFAKEDALFWKPAPL 689

Query: 539 LEERATKG 546
           L++   +G
Sbjct: 690 LQKLVAEG 697


>gi|299529900|ref|ZP_07043328.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
           testosteroni S44]
 gi|298722072|gb|EFI63001.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
           testosteroni S44]
          Length = 705

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 170/548 (31%), Positives = 284/548 (51%), Gaps = 9/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSL 59
           +ML  + I ++ G   GL+D +    + +     +A ++ A+  P +R +  T  +L   
Sbjct: 157 LMLSGQQIGAKAGLAAGLVDKLDDGADPVAAGLAYARELLAQGAP-LRPVSATPGRLADK 215

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           + A+  L   R    K +  +      +D ++  +      G+  E   F   +      
Sbjct: 216 AAAQAELDALRADTAKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRA 275

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           GL+H FFA+R T+K+P       +PR   K+A+IGGG MG+GI  + +   + V + E +
Sbjct: 276 GLIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERD 333

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           +E + +G   +E    GL+ +G+++++     L        Y +  DVD+VIEAV E + 
Sbjct: 334 AESIARGQANVEKVYNGLIAKGRMSEEAKAAILARYTPSTRYDDIADVDLVIEAVFEDLE 393

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F EL++ C    +LATNTS +D++ +   TS    +IG HFFSPA++M LLEIV 
Sbjct: 394 VKKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVV 453

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             + +  V+     + K +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID 
Sbjct: 454 PAKVAPDVVTTAFELAKKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDE 513

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R FG  +GPFQ+ DLAG  +  AT K        ++    + D + ++G  G+  G+G
Sbjct: 514 AVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICENGWFGQKTGRG 573

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y +G++  +PDP VL I++  R    +    +P   T +EI+   +  +VNE  +V+
Sbjct: 574 FYLYPQGARIGQPDPEVLAIVDAERAKKGVT--ARPF--TAEEIMRRYMAAMVNEGAKVV 629

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
            EGI +R  D+D   + G  FP +RGG + WAD  G   V   ++ +++    F+KP+  
Sbjct: 630 GEGIALRPLDVDVTFISGYGFPRHRGGPMKWADMQGLAKVLADIEAFAKEDALFWKPAPL 689

Query: 539 LEERATKG 546
           L++   +G
Sbjct: 690 LQKLVAEG 697


>gi|264679896|ref|YP_003279805.1| 3-hydroxyacyl-CoA dehydrogenase [Comamonas testosteroni CNB-2]
 gi|262210411|gb|ACY34509.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Comamonas
           testosteroni CNB-2]
          Length = 705

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 169/548 (30%), Positives = 286/548 (52%), Gaps = 9/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT-DKLGSL 59
           +ML  + I ++ G   GL+D +    + +     +A ++ A+    +R +  T  +L   
Sbjct: 157 LMLSGQQIGAKAGLAAGLVDKLEEGTDPVAAGLAYARELLAQGAS-LRPVSATPGRLADK 215

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           + A+  L   R    K +  +      +D ++  +      G+  E   F   +      
Sbjct: 216 AAAQAELDALRADTTKKSRGLFSPLKIIDCVQAALDLPFAEGLKFERAQFLACIDSPQRA 275

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           GL+H FFA+R T+K+P       +PR   K+A+IGGG MG+GI  + +   + V + E +
Sbjct: 276 GLIHAFFAERETAKIPEAR--AAQPRAFSKIAIIGGGTMGAGITVSALDAGLVVTMIERD 333

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           +E + +G   +E    GL+ +G+++++   + +        Y +  DVD+VIEAV E + 
Sbjct: 334 AESIARGQANVEKVYNGLIAKGRMSEEAKASIMARYTPSTRYDDIADVDLVIEAVFEDLE 393

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F EL++ C    +LATNTS +D++ +   TS    +IG HFFSPA++M LLEIV 
Sbjct: 394 VKKAVFKELDRVCKSGAVLATNTSYLDIDAIAAVTSRPQDVIGLHFFSPANIMKLLEIVV 453

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             + +  V+     + K +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID 
Sbjct: 454 PAKVAPDVVTTAFELAKKMKKVPVRAGVCDGFIGNRILATYKQAADYLMEDGASPYEIDE 513

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R FG  +GPFQ+ DLAG  +  AT K        ++    + D + ++G  G+  G+G
Sbjct: 514 AVRGFGFAMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICENGWFGQKTGRG 573

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y +G++  +PDP VL I++  R  + + P  +P   T +EI+   +  +VNE  +V+
Sbjct: 574 FYLYPQGARIGQPDPEVLAIVDAERAKNGVTP--RPF--TAEEIMRRYMAAMVNEGAKVV 629

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
            EGI +R  D+D   + G  FP +RGG + WAD  G   V   ++ +++    F+KP+  
Sbjct: 630 GEGIALRPLDVDVTFISGYGFPRHRGGPMKWADMQGLPKVLADIEAFAKEDALFWKPAPL 689

Query: 539 LEERATKG 546
           L++   +G
Sbjct: 690 LQKLVAEG 697


>gi|209516658|ref|ZP_03265511.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
 gi|209502933|gb|EEA02936.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
          Length = 706

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 173/552 (31%), Positives = 286/552 (51%), Gaps = 8/552 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  +  +++E    G+ID +  S ++L     +  ++ A   P +R       L   +
Sbjct: 157 LILSGRHASAKEALAFGMIDRLGDSGDILAEGLAYVHELLAAHAP-VRRTREATALTDRA 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +   +  AR +  K A  +      +D +E  I      G+  E K+F + +      G
Sbjct: 216 ASLAAVATAREETAKKARGLFSPLKIVDAVEAAIEQPFDEGLKLERKLFLQCLDSPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R   K P   D   KPR +  + V+GGG MG+GIA A +   + V + E + 
Sbjct: 276 LIHAFFAEREVLKAPETRDA--KPRALDAIGVVGGGTMGAGIAVAVLDAGLPVTMIERDE 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   I+    GL+ +G+LT ++    +    G   Y     VD+VIEAV E + +
Sbjct: 334 ASLARGRAHIDKVYDGLIAKGRLTAERKAAIMAGWSGSTSYDALAHVDLVIEAVFEDLDV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F EL++ C P  +LATNTS +D++ +    S    +IG HFFSPA++M LLE+V  
Sbjct: 394 KKAVFVELDRVCKPGAVLATNTSYLDIDAIAASVSRPADVIGLHFFSPANLMKLLEVVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++ SA V+     + K ++K PV  G C GF  NR    Y  +A  L   G   ++ID+A
Sbjct: 454 KQVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRLLAVYRAAADALTEDGASPYQIDAA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R+FG P+GPFQ++DLAG  +  A  K         +    + D L + G  G+  G+G 
Sbjct: 514 VRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPNARYVQIADRLCERGWFGQKTGRGF 573

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +GS+   PDP V  II+  R+ + I     P S +++EI+   +  ++NE   V+ 
Sbjct: 574 YLYPEGSRGGTPDPEVEAIIDAERKRAGIT----PRSFSDEEIMRRYMAAMINEGANVVH 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI +R  D+D   + G  FP YRGG + +AD+VG   +   ++++++    F++PS  L
Sbjct: 630 EGIALRPLDVDVTLLYGYGFPRYRGGPMKYADSVGLPTILADIREFAKEDPLFWRPSPLL 689

Query: 540 EERATKGIPLSA 551
            +   +G+  ++
Sbjct: 690 IDLVERGVDFAS 701


>gi|452749441|ref|ZP_21949203.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
 gi|452006667|gb|EMD98937.1| enoyl-CoA hydratase [Pseudomonas stutzeri NF13]
          Length = 701

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 189/548 (34%), Positives = 302/548 (55%), Gaps = 10/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           M++  + I + E  +  ++D +   E L +    +A  +    +   R+  +T  L G+ 
Sbjct: 152 MIVSGQPIGAAEAVEHNIVDELFDGE-LREAGLAYARRMVDESRAPRRTGEQTQGLEGAD 210

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +EA  +++    +  K  P +     C+  +E         G+ +E ++F E +      
Sbjct: 211 NEA--LIRTKHAEVAKRMPGLFSPLRCIAAVEAATKLPLAEGLKRERELFAECLNSPQRG 268

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            LVH FFA+R   K+ N     +KPR ++  AVIGGG MG GIA +     + V L E+N
Sbjct: 269 ALVHSFFAERQAGKI-NDLPADVKPRPIKTAAVIGGGTMGVGIALSFANAGVPVKLLEIN 327

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G++         V RG LT++     L ++ GV DY+   DVD+V+EAV E + 
Sbjct: 328 DDALQRGLQRARDTYAASVKRGSLTEEAMAQRLALIAGVTDYAALADVDVVVEAVFEEMG 387

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +KQ++F +L+  C P  ILA+NTS++DLN +   T   + ++G HFFSPA+VM LLE+V 
Sbjct: 388 VKQQVFEQLDAVCKPGAILASNTSSLDLNAIAAFTKRPEDVVGLHFFSPANVMRLLEVVH 447

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            E+TS +V+   M +GK +KKV VVVG C GF  NR  F Y + A  L+  G    ++D 
Sbjct: 448 GEKTSHEVLATAMAIGKKLKKVSVVVGVCDGFVGNRMVFQYGREAEFLLEEGATPQQVDG 507

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R+FG+ +GPF + DL+G  +  A  K      P       + D L ++G  G+  G G
Sbjct: 508 ALRNFGMAMGPFAMRDLSGLDIGQAIRKRQRATLPAHLDFPTVSDKLCEAGMLGQKTGTG 567

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE G++ P+ +P + P++E   R   I    +   + E+ IVE  +F +VNE  ++L
Sbjct: 568 YYRYEPGNRTPQENPELAPMLEAASREKGI----ERQKLDEQYIVERCIFALVNEGAKIL 623

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEGI  RASD+D   + G  FP++RGG +F+AD+VG + V   +K+  +  G+++KP+  
Sbjct: 624 EEGIAQRASDIDVIYLNGYGFPAFRGGPMFYADSVGLDRVLARVKELHERCGDWWKPAPL 683

Query: 539 LEERATKG 546
           LE+ A +G
Sbjct: 684 LEKLAAEG 691


>gi|187924712|ref|YP_001896354.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN]
 gi|187715906|gb|ACD17130.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia
           phytofirmans PsJN]
          Length = 706

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 176/550 (32%), Positives = 285/550 (51%), Gaps = 14/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  +  +++E    GLID + +S+++L     +  ++ A   P    + RT    +LS
Sbjct: 157 LILSGRHASAKEALAFGLIDRLGSSDDILAEGLAYVHELLAAHAP----VRRTRDAAALS 212

Query: 61  E---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           +   +   +  AR +  K +  +      +D +E  I      G+  E K+F E +    
Sbjct: 213 DRAASLAAVATARAETAKKSRGLFSPLKIVDAVEAAIEQPFDEGLRVERKLFLECIDSPQ 272

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
             GL+H FFA+R   K P       KPR +  + V+GGG MG+GIA A +   + V + E
Sbjct: 273 RAGLIHAFFAEREVLKAPETR--AAKPRTLNTIGVVGGGTMGAGIAVAVLDAGLPVTMIE 330

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            +   L +G   IE    GL+ +G+L+ +K    +    G   Y      D+VIEAV E 
Sbjct: 331 RDDASLARGRAHIEKVYDGLIAKGRLSAEKKAALMSRWSGSTSYDALAGADLVIEAVFED 390

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +KQ +F+EL++ C    +LATNTS +D++ +    S    +IG HFFSPA++M LLE+
Sbjct: 391 LAVKQAVFAELDRVCKAGAVLATNTSYLDIDALASSVSRPADVIGLHFFSPANIMKLLEV 450

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           V  ++ SA V+     + K ++K PV  G C GF  NR    Y  +A  ++  G   ++I
Sbjct: 451 VVPKQVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRVLAVYRSAADAMMEDGASPYQI 510

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D+A+R+FG P+GPFQ++DLAG  +  A  K         +    + D L + G  G+ +G
Sbjct: 511 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKSG 570

Query: 418 KGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           +G Y Y +GS+   PDP V  II+  R  + I P     S T++EI+   +  ++NE   
Sbjct: 571 RGFYLYPEGSRSGTPDPEVEAIIDAERARAGITPR----SFTDEEIIRRYMAAMINEGAN 626

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           V+ E I +R  D+D   + G  FP YRGG + +AD VG   +   ++++++    F+KPS
Sbjct: 627 VVHERIALRPLDVDVTFLYGYGFPRYRGGPMKYADMVGLPKILADIREFAKEDPLFWKPS 686

Query: 537 RFLEERATKG 546
             L E   +G
Sbjct: 687 PLLIELVERG 696


>gi|359795628|ref|ZP_09298244.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
           arsenitoxydans SY8]
 gi|359366313|gb|EHK67994.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Achromobacter
           arsenitoxydans SY8]
          Length = 733

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 173/551 (31%), Positives = 283/551 (51%), Gaps = 15/551 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K ++++     GL+DA+ + E+ L     +   + A      R+    D L    
Sbjct: 184 LMLTGKHLSADAALAAGLVDALASEEDPLDAGLAYTRQLLALNAGPRRTRDAADALSDRQ 243

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                +  A  +   TA  +      +  +   I      G+  E  +F + +       
Sbjct: 244 AQLAAVDAAAERIATTARGLFSPARIVQAVRAAIEQPFDEGLRTERALFLQCLDSPQRAA 303

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R T+K+P + +   + R + +V ++GGG MG+GIA A +   + VV+ E + 
Sbjct: 304 LVHAFFAERETAKIPELKEA--RARRLERVGIVGGGTMGAGIAVAVLDAGLPVVMVEQDD 361

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E     LV +G+++ D+    L    G  +Y    + D++IEAV E + +
Sbjct: 362 AALARGRARVEQVYDLLVKKGRISSDERAARLARFTGATNYDALGEADLIIEAVFEDMAV 421

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F++L++   P  +LATNTS +D+N + E T     ++G HFFSPA++M LLE+V  
Sbjct: 422 KQAVFAQLDRVAKPGAVLATNTSYLDVNQIAEATRGPADVLGLHFFSPANIMKLLEVVVG 481

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             T+   +     + + ++K PV  G C GF  NR    + Q+A +++  G   + ID+A
Sbjct: 482 RHTAPDTVATGFELARRLRKTPVRAGVCDGFIGNRILAVHRQAADMMMEDGASPYDIDAA 541

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKE----FDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +R+FG P+GP+Q+ DLAG  +  AT K      D A   R  Q P  D L + G  G+  
Sbjct: 542 VRAFGYPMGPYQMADLAGGDIGWATRKRRAATRDPAL--RYVQIP--DRLCERGWFGQKT 597

Query: 417 GKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G+G Y Y  G++   PDP VL II++ RR + + P  +P   T+ +I+   L  +VNE+ 
Sbjct: 598 GRGFYLYPDGARQGTPDPDVLAIIDDERRRAGVAP--RPF--TQDDILSRYLAAMVNEAA 653

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
            VL +GI +R SD+D   + G  FP YRGG + +AD+V    +   ++ ++     F+KP
Sbjct: 654 NVLHQGIALRPSDIDVVFLSGYGFPRYRGGPMHYADSVDLPRILADIRGFAAEDPAFWKP 713

Query: 536 SRFLEERATKG 546
           S  L   A  G
Sbjct: 714 SPLLVALAESG 724


>gi|319791569|ref|YP_004153209.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Variovorax
           paradoxus EPS]
 gi|315594032|gb|ADU35098.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Variovorax
           paradoxus EPS]
          Length = 711

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 281/552 (50%), Gaps = 8/552 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +   ++E   LGL+D + T  +       +A ++ A + P +R       L    
Sbjct: 162 LMLSGRHAGAKEALSLGLVDRLGTEADARAEGLAYAEELVAAKAP-VRRTREAAGLADKE 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +R  L+ AR    K +  +      ++ +E  +      G+  E K+F + +      G
Sbjct: 221 ASRAALEAARTDTAKKSRGLFSPMKIVEAVEGALTLPFDEGMALERKLFMQCIDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R   K P        PR +    ++GGG MG+GIA A +   + V + E + 
Sbjct: 281 LIHAFFAEREVLKAPETKSA--NPRKLESAGIVGGGTMGAGIAVAMLDAGLPVTMIERDE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G + +E    GL+ +G++T +     +    G   Y    +VD+V+EAV E + +
Sbjct: 339 PSLARGRQHVEKVYDGLIAKGRMTPEAKAAVMARFSGSTSYDALANVDIVVEAVFEEMGV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL++ C P  +LATNTS +D++ +         ++G HFFSPA++M LLEIV  
Sbjct: 399 KKAVFAELDRVCKPGAVLATNTSYLDIDEIAASIKRPQDVVGLHFFSPANIMKLLEIVVP 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K +KKVPV  G C GF  NR    Y Q+A  ++  G   ++ID A
Sbjct: 459 AKVSADVVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYQIDEA 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ+ DLAG  +  AT K        ++    + D + + G  G+   +G 
Sbjct: 519 VREFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPQARYVQIADRICERGWFGQKTQRGY 578

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G++   PDP+VL II+  R  + I+      S T +EI+   +  +VNE   V+ 
Sbjct: 579 YLYPEGARTGSPDPAVLAIIDAERERAGIV----RRSFTNEEIIRRYMAAMVNEGANVVL 634

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           + I +R  D+D   + G  FP +RGG + +AD VG   V   ++++++    F+KPS  L
Sbjct: 635 QRIALRPLDVDVTFLYGYGFPRHRGGPMKYADTVGLPKVLADIREFAKEDPIFWKPSPLL 694

Query: 540 EERATKGIPLSA 551
            E   +G   S+
Sbjct: 695 VELVERGADFSS 706


>gi|115352985|ref|YP_774824.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria AMMD]
 gi|115282973|gb|ABI88490.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia ambifaria AMMD]
          Length = 711

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 271/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  +++E   LGLID +  S++ L     +A ++ +   P  R+         +S
Sbjct: 162 LMLTGRHASADEALALGLIDRLAHSDDTLAEGLAYAQELVSLGAPARRTRDARGLADRVS 221

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
               +        KK+   +      +D +E  +     +G+  E  +F + +      G
Sbjct: 222 AQAAIDAARADLPKKSR-GLFSPAKIVDAVEAALTQSFDAGMKLERSLFLQCIDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P       +P  V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 281 LVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 339 AALARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 399 KQAVFAELARVCKPGAVLATNTSYLDIDELAASIDRPADVIGLHFFSPANVMKLLEIVVP 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA+V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 459 ARVSAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+   +G 
Sbjct: 519 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTARGY 578

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+ + R    I     P + ++ EI+   L  ++NE   V+ 
Sbjct: 579 YLYPDGARVGTPDPEVEAIVADERAKKGIT----PRAFSDDEILRRYLAAMINEGANVVH 634

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ ++     F+KPS  +
Sbjct: 635 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFANEDPLFWKPSPLI 694

Query: 540 EERATKG 546
            E   +G
Sbjct: 695 VELVERG 701


>gi|410647349|ref|ZP_11357783.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
 gi|410133052|dbj|GAC06182.1| peroxisomal bifunctional enzyme [Glaciecola agarilytica NO2]
          Length = 656

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 175/538 (32%), Positives = 296/538 (55%), Gaps = 25/538 (4%)

Query: 17  GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE---AREVLKLARLQA 73
           G++D +V+ + +LK    +A  +A + +P I +     K+G   +   A+   KLA+   
Sbjct: 131 GIVDKIVSDDLVLKTIE-FAQQVALK-QPVIATPLLNVKMGEAEDTIFAQYRAKLAKRAR 188

Query: 74  KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133
            + AP     Q+ +D IE  +      G+ KE + F        S  + H FFA++A  K
Sbjct: 189 GQQAP-----QSAIDSIENALNLPFNQGLKKEREYFLSCRESTESAAMRHAFFAEKAAVK 243

Query: 134 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 193
            P   +  ++P  + ++A+IG G MG GIA + +     V+L E + E L +G   I   
Sbjct: 244 YPATLN-KIEPLHIEQIAIIGAGTMGGGIAMSFLDRGYPVILVETSEENLARGTSGITER 302

Query: 194 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 253
            + +V   +++Q++ +  LKM+K    Y +  DVD+VIEA  ES+ +K++IF +L+  C 
Sbjct: 303 YKKMVLSKRISQEQMDIRLKMMKATCCYDDLHDVDLVIEAAFESMEVKREIFRKLDAVCK 362

Query: 254 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 313
           P  ILA+NTS +D+  + E T+  ++++G HFFSPA++M LLEIVR + TS   ++  + 
Sbjct: 363 PQTILASNTSYLDIEEIAESTARPEKVLGMHFFSPANIMKLLEIVRCKETSETTLISAVA 422

Query: 314 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 373
           + K I K+  VVG C GF  NR +  Y + A  L+  G    +ID A+  +G+ +GP  +
Sbjct: 423 LAKHIGKISSVVGMCYGFVGNRMYSCYGREANSLLLEGATPSQIDQAMVDWGMAMGPLAV 482

Query: 374 LDLAGYGVAAATSKEFDKAFPDRSFQSPL----VDLLLKSGRNGKANGKGLYTYEKGSKP 429
            D++G  +A    KE     P+ S ++PL     +L++++GR G+   KG Y Y++    
Sbjct: 483 NDMSGIDIAYNARKE----NPNLS-KNPLYFHAANLMVEAGRLGQKTQKGFYQYDEAGVK 537

Query: 430 KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 489
             DP+ L I ++  +L  I        +++  I E +++ ++NE  ++LEE I  +ASD+
Sbjct: 538 SEDPAALAIFQQEAKLHGI----PQQEISQAHIQERLIYALINEGAKILEESIAKQASDI 593

Query: 490 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 546
           D   + G  FP YRGG +F+AD +G + V  S++++ Q+ G  ++KPS  L E A  G
Sbjct: 594 DVIWLNGYGFPRYRGGPMFYADTIGLDKVLESIQQFYQVTGKEWWKPSPLLVELAHAG 651


>gi|449474069|ref|XP_004154065.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like, partial [Cucumis sativus]
          Length = 337

 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 138/245 (56%), Positives = 183/245 (74%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE + LGL+DA+V  EEL+  +R WALDI+ RRKPWI SLH+T+KL SL+
Sbjct: 64  MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 123

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +ARE+ K AR Q +K APN+     C+DV+E G+V G  +G+ KE + F+ L+  DTS+ 
Sbjct: 124 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 183

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 184 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 243

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  FKDVDMVIEAVIE++ L
Sbjct: 244 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 303

Query: 241 KQKIF 245
           KQ+I 
Sbjct: 304 KQQII 308


>gi|311108557|ref|YP_003981410.1| fatty acid oxidation complex subunit alpha [Achromobacter
           xylosoxidans A8]
 gi|310763246|gb|ADP18695.1| fatty acid oxidation complex subunit alpha 2 [Achromobacter
           xylosoxidans A8]
          Length = 702

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 182/551 (33%), Positives = 285/551 (51%), Gaps = 19/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELL----KVSRLWALDIAARRKPWIRSLHRTDKL 56
           ++L  +S+  +    LGL+D V     LL    + +R    D AA R+    +  +   L
Sbjct: 156 LILEGRSVDGKAALTLGLLDQVCDEASLLDCAVRKARALCADHAAARRGAAAADDKQAGL 215

Query: 57  GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
            +++  RE     RL AK    ++P     LD ++  +      G+  E + F + V   
Sbjct: 216 AAVAAQRE-----RLAAKPH--SLPAQHLLLDCLQAALELPLQEGLKVEREAFLQCVASP 268

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
             +GL H FFA+R   K P       +PR V++  VIGGG MG+GIA A +   + VVL 
Sbjct: 269 EHKGLAHAFFAERLAGKSPAGA---ARPRPVQRAGVIGGGTMGAGIAVAMLDAGLDVVLI 325

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E ++  L  G + I+   +  V  G+L        L  L    DY+    VD+V+EAV E
Sbjct: 326 ERDAASLQAGQERIDGVYQRQVNSGRLDAATREQRLSRLSTATDYAALAAVDLVVEAVFE 385

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +K ++F++L++ C P  ILATNTS +D+N +    S    +IG HFFSPA++M LLE
Sbjct: 386 DMDVKTQVFAQLDRVCKPGAILATNTSYLDINQIARSISRPQDVIGLHFFSPANIMKLLE 445

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           IV  E+ +  V+     + + + KVPV  G C GF  NR  + Y ++A  ++  G   ++
Sbjct: 446 IVVPEQVADDVVATGFALARRLGKVPVRAGVCDGFIGNRILYVYREAANHMMEDGASPYQ 505

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           ID A+  FG  +GPF+  DL G  +  AT K      P  +    + D L + G  G+  
Sbjct: 506 IDQALERFGYAMGPFRTADLTGGDIGWATRKRKAATRPPEARYVQVADRLCERGWFGQKT 565

Query: 417 GKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G+G Y Y E+G + KPD  VL +I++ R    I    +P S  +++IV   +  +VNE+ 
Sbjct: 566 GRGYYLYPERGQRGKPDAEVLALIDQERAARGIE--ARPFS--DEDIVRRYMAALVNEAA 621

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           +VL++GI +R +D+D A V G  FP +RGG + +AD VG   V   ++ +++    F+ P
Sbjct: 622 KVLDDGIALRPADIDAALVNGYGFPRWRGGPMKYADDVGLAAVLADIESYAKEDAAFWAP 681

Query: 536 SRFLEERATKG 546
           S  L   A +G
Sbjct: 682 SELLRRLAREG 692


>gi|167568599|ref|ZP_02361473.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia oklahomensis C6786]
          Length = 708

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 276/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGLID +  S++ L     +A ++ A   P +R       L   +
Sbjct: 159 LMLSGRHASAEEALTLGLIDRLAHSDDTLAEGLAYAQELLAAGAP-VRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    K +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVAKKSRGLFSPAKIVDAVAAALAQPFDEGLRAERRLFLECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P  T  G  PR V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 278 LVHAFFAEREAAKSPE-TRRG-APRPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYDALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARVCKPGAVLATNTSYLDIDEIAASVERASDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K +KK+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AQVSADVVATAFELAKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 VREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIPDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II++ R    +     P + T++EI+   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIDDERAKRGVT----PRAFTDEEIIRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFANEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|307729102|ref|YP_003906326.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1003]
 gi|307583637|gb|ADN57035.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1003]
          Length = 706

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 180/555 (32%), Positives = 284/555 (51%), Gaps = 24/555 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLK-----VSRLWALDIAARRKPWIRSLHRTDK 55
           +ML  +  +++E    GL+D +  SE++L      V  L A   AARR            
Sbjct: 157 LMLSGRHASAKEALAWGLVDRLGASEDILAEGLAYVHELLASHAAARRT------RDASA 210

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
           L   + +   +  AR Q +K A  +      +D +E  I      G+  E ++F + +  
Sbjct: 211 LSDRTASLAAVAAARAQTEKQARGLFSPLKIVDAVEAAITQPFEDGLRLERQLFLQCIDS 270

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
               GL+H FFA+R   K P       KPR +  + V+GGG MG+GIA A +   + V +
Sbjct: 271 PQRVGLIHAFFAEREVLKAPETR--AAKPRPLETIGVVGGGTMGAGIAVAVLGAGLPVTM 328

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E +   L +G   IE    GL+ +G+++  K    L    G   +    + D+VIEAV 
Sbjct: 329 IERDEASLARGRAHIEKVYDGLIAKGRMSAAKKAELLARFTGSTSHEALANADLVIEAVF 388

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +KQ +F+EL++ C    +LATNTS +D++ +   TS    +IG HFFSPA++M LL
Sbjct: 389 EDLAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAAGTSRPADVIGLHFFSPANIMKLL 448

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E+V     SA V+     + K ++K PV  G C GF  NR    Y  +A  ++  G   +
Sbjct: 449 EVVVPRAVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRILAVYRSAADAMMEDGASPY 508

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV---DLLLKSGRN 412
           +ID+A+R+FG P+GPFQ++DLAG  +  A  K   +  P R+  +  V   D L + G  
Sbjct: 509 QIDAAVRAFGFPMGPFQVVDLAGGDIGWAARK---RRAPTRNPAARYVQIADRLCERGWF 565

Query: 413 GKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+  G+G Y Y +GS+  +PDP V  II+  R  + I     P + T+ EI+   +  ++
Sbjct: 566 GQKTGRGFYLYPEGSRSGQPDPEVEAIIDIERARAGIT----PRTFTDDEIIRRYMAAMI 621

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE   V+ EGI +R  D+D   + G  FP YRGG + +AD VG   +   ++++++    
Sbjct: 622 NEGANVVHEGIALRPLDVDVTFLYGYGFPRYRGGPMKYADMVGLPRILADIREFAKEDPL 681

Query: 532 FFKPSRFLEERATKG 546
           F++ S  L E   +G
Sbjct: 682 FWQASPLLVELVERG 696


>gi|449475201|ref|XP_004154403.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like, partial [Cucumis sativus]
          Length = 444

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 138/245 (56%), Positives = 183/245 (74%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE + LGL+DA+V  EEL+  +R WALDI+ RRKPWI SLH+T+KL SL+
Sbjct: 171 MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 230

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +ARE+ K AR Q +K APN+     C+DV+E G+V G  +G+ KE + F+ L+  DTS+ 
Sbjct: 231 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 290

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 291 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 350

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  FKDVDMVIEAVIE++ L
Sbjct: 351 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 410

Query: 241 KQKIF 245
           KQ+I 
Sbjct: 411 KQQII 415


>gi|88810261|ref|ZP_01125518.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
 gi|88791891|gb|EAR23001.1| fatty oxidation complex, alpha subunit [Nitrococcus mobilis Nb-231]
          Length = 726

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 182/547 (33%), Positives = 282/547 (51%), Gaps = 25/547 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA----LDIAARRKPWIRSLH----R 52
           +ML  K + + +  +LGL+D  V +  LL  +  W          R   W+++L     R
Sbjct: 178 LMLTGKRLRATQAQRLGLVDDRVPTSILLDTALQWVEVCQRGRVRRGGGWLQALTAWALR 237

Query: 53  TDKLGSLSEAREVLKLARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKE 111
            + LG       V K AR Q A +T  N P     ++ +E G+  G   G+  EA+ F E
Sbjct: 238 GNPLGRAM----VFKQARKQVAARTQGNYPAPTRLIECVERGLSEGIEPGLKAEAQAFGE 293

Query: 112 LVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNN 170
           L M   +R L++++FA  A  K   V D  ++PR VR+V V+G GLMG+GI+        
Sbjct: 294 LAMTPQARQLINLYFATSAMKKDTGVADPDVEPRAVRRVGVLGAGLMGAGISFVTAARAK 353

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
           + V LK+V  + L  G+K I+  +   ++R  +++ +A  A   +   LD+S  + +D+V
Sbjct: 354 VPVRLKDVEPKGLASGLKYIDERIDQRLSRHAISRFEAERARCRVTPTLDFSGCRSLDLV 413

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           IEAV E + LK ++  E+E  C    I A+NTS++ L  + +       +IG H+FSP  
Sbjct: 414 IEAVFEDLELKHRMIREVEANCNADVIFASNTSSLPLARIAQAAERPQNVIGLHYFSPVD 473

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350
            MPLLE++  ERT+ +VI   M  G+   K P+VV +  GF VNR   PY   A  L+  
Sbjct: 474 RMPLLEVIAHERTAPEVIATAMAFGRAQGKTPIVVRDGVGFYVNRILAPYLNEAVHLLEE 533

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSG 410
           GV + RID A+  FG P+GPF+LLD  G  + A  +    +AF +R      V+ +L++ 
Sbjct: 534 GVAIDRIDQALVRFGFPVGPFKLLDEVGIDIIAKVAPVLHEAFGERMRPVSAVERMLEAD 593

Query: 411 RNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
           R GK NG+G Y Y  K S  + D SV  ++    R            + +  IVE  L  
Sbjct: 594 RLGKKNGRGFYRYGGKRSGKEVDESVYGLLAVSTRQ----------EMADTAIVERTLIL 643

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE+ R L+EGI+  A D D  +V G+ FP + GG   + D+ G + V ++L  +    
Sbjct: 644 LLNEAARCLDEGIIREARDGDVGAVFGIGFPPFLGGPFRYMDSRGLDAVASALAGFESSV 703

Query: 530 GNFFKPS 536
           G  + P+
Sbjct: 704 GRRYAPA 710


>gi|421747817|ref|ZP_16185486.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
           HPC(L)]
 gi|409773513|gb|EKN55297.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus necator
           HPC(L)]
          Length = 693

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 174/534 (32%), Positives = 278/534 (52%), Gaps = 18/534 (3%)

Query: 15  KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 74
           ++GL+D +     L   +  +A  +    +P  +     DK+ +     E+    R    
Sbjct: 169 EMGLVDLLTDDASLRADAIAFARQVVGEGRPLRKVRDLDDKIAAARGKPEIFAEFRRANA 228

Query: 75  KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134
           +        +  +  IE  +      G+ +E  +F EL+    S    + FFA R   ++
Sbjct: 229 RRFRGFDAPEYNIRCIEAAVELPFDEGLKRERAMFVELLNGTQSAAQRYYFFASRQVWQL 288

Query: 135 PNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEA 192
           P++  D  L P  VR+V +IG G MG GIA  + LN  Y V + E + + L +G++TI  
Sbjct: 289 PDIDADTPLLP--VRQVGIIGAGTMGGGIAM-NFLNAGYPVTIVETSQQALDRGVRTIRT 345

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
           N      +G++T     + + +L   L+  +  D D+VIEAV E++ +K+ +F  L++  
Sbjct: 346 NYENTAKKGRITATDIEHRMALLTPTLEMEKLADADLVIEAVFENMDVKKDVFGRLDRIA 405

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
            P  ILATNTS +D++ +   TS  + +IG HFFSPA+VM LLE+VR  RT+  VI   M
Sbjct: 406 KPGAILATNTSALDVDEIAAATSRPESVIGLHFFSPANVMKLLEVVRGARTAKPVIRTSM 465

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            + + I K+  +VG C GF  NR      + A+ LV  G   + +D A+  FG P+GPF 
Sbjct: 466 ELARKIGKIAALVGVCPGFVGNRMLAQRQREAQKLVLEGALPWDVDRALYEFGFPMGPFA 525

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 432
           + DLAG  +     K         S  S L ++L +  R G+  G G Y Y++    KP 
Sbjct: 526 MSDLAGLDLGWVREK---------SSSSTLREILCEMERRGQKTGAGYYDYDEKRNAKPS 576

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
               P++E+  R      G     V+E+EI+E  ++P++NE  ++LEEG  +RASD+D  
Sbjct: 577 ----PVVEQVIRDFAAKQGRTSRVVSEQEILERCIYPMINEGAKILEEGKAIRASDIDVI 632

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            V G  +P YRGG +F+AD +G + V  +L+++ + +G  FKP+R LEE   +G
Sbjct: 633 WVNGYGWPVYRGGPMFYADTIGLDKVLETLRRYEESFGPDFKPARLLEELVAQG 686


>gi|262195563|ref|YP_003266772.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
           ochraceum DSM 14365]
 gi|262078910|gb|ACY14879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
           ochraceum DSM 14365]
          Length = 686

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 162/446 (36%), Positives = 249/446 (55%), Gaps = 18/446 (4%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+  E + F +L   + S  + H+FFA+R  +K+ ++   G++ R + +V +IG G MG 
Sbjct: 252 GLQYEREEFSKLSEGEQSAAMRHLFFAERKAAKIDDLP-AGIETRAIARVGIIGAGTMGG 310

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GIA   +   + V L E + E L +G+  I  N +    +G+ T  +  + L +L G L 
Sbjct: 311 GIAMNFVQAGVPVTLVETSQEALDRGLGVIAKNYQRSAAKGRFTPAQVESWLGLLTGTLA 370

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
             E  + D++IEAV E + +K +IF++L++   P  ILATNTS +D++ +    S    +
Sbjct: 371 IEELAECDLIIEAVFEDMAVKTQIFAKLDEIAKPGAILATNTSYLDIDEIAASISRPGDV 430

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G HFFSPA+VM LLE+VR  RT+  V+  +M + K I+KV VV G C GF  NR   P 
Sbjct: 431 LGTHFFSPANVMKLLELVRGARTAPDVLATVMALAKKIRKVAVVSGVCHGFIGNRMLEPR 490

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            + A  L+  G    ++D+   +FG+P+GPFQ+ DLAG  +      E  ++  D+    
Sbjct: 491 QREASKLLLEGATPEQVDAVHVAFGMPMGPFQMADLAGVDIGWHRDPERVESVRDQ---- 546

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR-RLSNIMPGGKPISVTE 459
                L   GR G+  G G Y Y++  +P P P V  II E R RL     G +  ++ +
Sbjct: 547 -----LCAEGRWGQKKGAGFYDYDERRQPSPSPRVGEIIAEWRERL-----GVEARAIDD 596

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
            EIV   L+P+VNE  R+L EGI  RASD+D   V G  +P YRGG +FWAD+VGA  + 
Sbjct: 597 DEIVARTLYPMVNEGARILAEGIAQRASDIDVVWVYGYGWPVYRGGPMFWADSVGAATIV 656

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATK 545
             L+++++  G    P   L E+A++
Sbjct: 657 AGLERYAERSGIAVAP--LLREKASQ 680


>gi|383643635|ref|ZP_09956041.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas elodea ATCC 31461]
          Length = 674

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 180/534 (33%), Positives = 274/534 (51%), Gaps = 35/534 (6%)

Query: 17  GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK- 75
           GL+D +   + LL  +  +A ++    KP  RS  R   +    +A    K     AK+ 
Sbjct: 167 GLVDRLAGEDSLLADAVAFANEVIG--KPVSRSSERPVTV----DAETFAKFRAANAKRF 220

Query: 76  ---TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132
               APN       +D+IE+        GV  E   F +L+M   S  L H+FFA+R  +
Sbjct: 221 RGLDAPN-----TIIDIIEQTAGKPYAEGVQAERMGFMKLIMGQQSAALRHIFFAERKAA 275

Query: 133 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 192
           K+  + D  ++ R +R+V VIG G MG GI+   +   + V + E+  E L +G   +  
Sbjct: 276 KIDGIAD-DIQLRDIRRVGVIGAGTMGGGISMNFLSAGVPVTIVEMAQEALDRGTGVMRK 334

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
           N      +G++T ++   A+ +LK  L++ +  + D++IEAV ES+ +K+ +F  L+   
Sbjct: 335 NYEASAAKGRMTAEQVEKAMGLLKPTLNFDDLAECDLIIEAVYESMDVKKDVFGRLDTIA 394

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
            P  ILA+NTS ++++ +   TS    ++G HFFSPA+VM LLEIVR  +T+  V+   M
Sbjct: 395 KPGAILASNTSYLNIDEIAAATSRPQDVVGLHFFSPANVMKLLEIVRGAKTADDVLATAM 454

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            + K IKKV V+ G C GF  NR   P    A  ++  G    +ID    +FG+P+GPFQ
Sbjct: 455 ALSKKIKKVAVIAGVCYGFIGNRMLMPRQVEATKMLLEGATPEQIDKVHVAFGMPMGPFQ 514

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 432
           + DLAG  +            P+R     + D L   GR G+  G G Y Y++  +P   
Sbjct: 515 MADLAGVDIGWHRD-------PNRI--ENIRDALAAEGRWGQKKGAGFYDYDEKRQPSNS 565

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
           P V  +IEE R   N+        +TE+EIV   L+ +VNE   +L EG+  RASD+D  
Sbjct: 566 PRVAELIEEWRGKLNV----PSHEITEEEIVVRTLYTMVNEGALILAEGMAQRASDIDVV 621

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            V G  +P YRGG +FWAD  G   +   L+K+       F+ +  L E+A KG
Sbjct: 622 WVYGYGWPPYRGGPMFWADTEGLKKIVEGLEKYG------FEVAPLLREKAEKG 669


>gi|357973934|ref|ZP_09137905.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. KC8]
          Length = 679

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 185/547 (33%), Positives = 281/547 (51%), Gaps = 22/547 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    I +++   +GLID + T   L   +  +A +IA      +R L RT +  +++
Sbjct: 150 MIVGGAPIGAKKALDVGLIDRLATEGNLAAEAIAFAQEIAD-----VRPLPRTSEKTAVA 204

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           E   V +  R    +        +AC+  I+  +      G+  E  + K LV  D S+ 
Sbjct: 205 EPG-VFEAFRAANARKMKGFEAPEACITAIKAAVELPFAEGLEVERGLIKTLVASDQSKA 263

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             H+FFA+RA +KV  +  D  L P  V+ V VIG G MG GIA   +   I V + E+ 
Sbjct: 264 QRHIFFAERAAAKVDGLPADTPLIP--VQSVGVIGAGTMGGGIAMNFLSIGIPVTILEMK 321

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ T+  N    V  G++TQ++A+ A+ +LK  L Y +    D++IEAV E++ 
Sbjct: 322 QEALDRGVATVAKNYANNVKSGRMTQEQADKAVALLKPTLSYDDLGAADLIIEAVFENMD 381

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F++L+K      ILA+NTS +D++ +   TS  + ++G HFFSPA+VM LLE+VR
Sbjct: 382 VKKEVFAKLDKVAKAGAILASNTSYLDVDEIAAVTSRPEYVLGMHFFSPANVMKLLEVVR 441

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             +TS  V+   M++ K IKK+ VV G C GF  NR   P    A  L+  G     +D 
Sbjct: 442 GAKTSDSVLATAMSLAKSIKKIAVVAGVCYGFIGNRMLKPRQDQAGQLILEGAKPSDVDR 501

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
               FG P+GPFQL DLAG  +             D + +  + + L   GR G+ +G G
Sbjct: 502 VFLDFGFPMGPFQLADLAGLDIGWHR---------DPTRRETVREALCAEGRLGQKSGSG 552

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  +  P P    II E      I        +++ E+ E  L+ +VNE  +VLE
Sbjct: 553 FYDYDEKRQRTPSPVAEKIIAEYAASKGI----AQRVISDDEVRERCLYTLVNEGAKVLE 608

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG   RASD+D   V G  +P Y GG + WAD +G   V   LK+ +   G  F  S  L
Sbjct: 609 EGKAQRASDIDVVWVFGYGWPVYLGGPMKWADQIGLKTVVDGLKRQADRLGPDFTISPLL 668

Query: 540 EERATKG 546
             +A KG
Sbjct: 669 AAKAEKG 675


>gi|294899893|ref|XP_002776796.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
           50983]
 gi|239883997|gb|EER08612.1| 3-hydroxyacyl-CoA dehyrogenase, putative [Perkinsus marinus ATCC
           50983]
          Length = 733

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 188/562 (33%), Positives = 290/562 (51%), Gaps = 35/562 (6%)

Query: 2   MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 61
           ML  + I +    +  +ID +V +++L+  +   AL    RR   + +    D++  +  
Sbjct: 159 MLGGQPIPAALAKRQKMIDEIVPADKLIDAAAAIALTKPVRRTSEM-TCSTADRVMVVGG 217

Query: 62  ARE--VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG--YSGVLKEAKVFKELVMLDT 117
           A E  + ++ R +  + AP     +A    ++  +  G     G   E + F +L+    
Sbjct: 218 AVEMGINQIDRFRKHQIAP-----EAIGRCVKAAVESGADFQKGCRVEQEEFDKLLYSKE 272

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           S  L H+FFA+R  +KV   + +  KP  ++KV V+G GLMG GIA   +   + VVL +
Sbjct: 273 SGALRHLFFAERIANKV---SGLRAKPLPIKKVGVVGAGLMGGGIAMCFVAKGMPVVLLD 329

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              E+L +G+  I+ N    V R  L  ++A   LK++K  LDY++F D D+VIEAV E+
Sbjct: 330 AKEEFLSRGMGLIKKNYETSVARKSLKLEEAAKRLKLIKPSLDYADFGDCDIVIEAVFEN 389

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQ-DRIIGAHFFSPAHVMPLLE 296
           + LKQ IF +L+K   P  +L +NTS++D++ +      +   ++G HFFSPA+VM LLE
Sbjct: 390 LKLKQDIFKQLDKVTKPDALLCSNTSSLDIDAIASMVPKRAANVVGTHFFSPANVMKLLE 449

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
            VRT+  S   I  +M +GK+I KV V+VGNC GF  NR   PY    R +V  G D+  
Sbjct: 450 NVRTKGASDTTIATVMAMGKLINKVAVLVGNCDGFVGNRMLGPYGAEVRQMVEEGGDLAE 509

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSK-EFDKAFPDRSFQSP--LVDLLLKSGRNG 413
            D+    FG+ +GP  + DL G  +     K   D          P  L D L + GR G
Sbjct: 510 FDAVAVDFGMAMGPLSMSDLVGQDLFWRARKMAGDMKMETAVAIGPHDLTDWLCEKGRFG 569

Query: 414 KANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           +  GKG+Y Y KG   K  D  +L  ++E ++   + P      + EKE++E +LFP+VN
Sbjct: 570 QKAGKGVYVYGKGRGDKKIDQEILEGVKEIQKRKGVTPR----VIDEKEMLERMLFPLVN 625

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADA-VGANYVYTSLKKWSQLYGN 531
           E  ++LEEG+  R SD+D   + G  FP  +GG + WAD  +G  Y+   L+ +      
Sbjct: 626 EGFKILEEGMAQRPSDIDIVWIYGYGFPPVKGGPMHWADNYIGLGYLLERLRYYDNQAAE 685

Query: 532 ------------FFKPSRFLEE 541
                       +F PSR LEE
Sbjct: 686 RSTKNKNYRKPKYFVPSRLLEE 707


>gi|390167396|ref|ZP_10219386.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
 gi|389589946|gb|EIM67952.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum B90A]
          Length = 705

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 175/503 (34%), Positives = 267/503 (53%), Gaps = 17/503 (3%)

Query: 48  RSLHRTDKLGSLS-----EAR-EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSG 101
           RS+ R+  L S+S     + R E+   AR +  ++    P     +  +E   V    +G
Sbjct: 189 RSVARSGDLPSISSLPPAQPRPEIFDAARARLSRSGERYPALPEIIAAVEAATVLDFAAG 248

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGS 160
           +  E   FK L+  D S+ L H F A+R  S V  +  D+G+  R +   AVIG GLMG+
Sbjct: 249 MEVEKSAFKRLIETDVSKALRHGFLAERRASHVRAIGADVGV--RRLDTAAVIGAGLMGT 306

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GIA       I V L E + +  ++  K+++  +   V +G+LT  +A     +++   D
Sbjct: 307 GIAQCLAAAGIEVTLLETSEQATVRSEKSVDDVLGRAVAKGRLTAKQAEAQKALIRWTTD 366

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y + ++VD+ IEAV ES+  K+ +F EL++   P  ILA+NTST+DLN +   T     +
Sbjct: 367 YGDLRNVDIAIEAVFESLEAKRAVFEELDRNLRPGAILASNTSTLDLNAIAAFTQRPADV 426

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G HFFSPA+VM LLE+VR +RT+  V+   M  G+ I KV V+ G C GF  NR    Y
Sbjct: 427 VGTHFFSPANVMRLLEVVRGDRTAPDVVKTAMQFGRRIGKVSVLSGVCDGFIGNRMVEEY 486

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            + A  LV  G   F +D A+  FG  +GPF++ DLAG  +  +  K   +  PD  + S
Sbjct: 487 FRQAMFLVEEGALPFEVDEALEEFGFSMGPFKVADLAGLDIGWSIRKRRAQERPDMPY-S 545

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
           P++D L + GR G+    G+Y Y  G     DP V   I    +  NI        +++ 
Sbjct: 546 PVLDGLCEQGRFGQKTKAGVYLYADGRTAVRDPEVERSIAAFSQSQNIARR----EISKS 601

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EIV+  +  +VNE  ++LEEGI  RASD+D   + G  FP +RGG +F AD+VG + V  
Sbjct: 602 EIVDRCVLALVNEGAKILEEGIAQRASDIDVVYLAGYGFPDFRGGPMFHADSVGLDKVVE 661

Query: 521 SLKKWSQLYGN---FFKPSRFLE 540
            +  + +L      F++P+  L+
Sbjct: 662 RMTVFERLQTRDPAFWRPAPLLQ 684


>gi|413961192|ref|ZP_11400421.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
 gi|413931906|gb|EKS71192.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
          Length = 709

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 178/548 (32%), Positives = 277/548 (50%), Gaps = 10/548 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALD-IAARRKPWIRSLHRTDKLGSL 59
           MML    I +EE  +LGL+D V  S+++      +A + IA +  P  R       L   
Sbjct: 160 MMLSGHHIGAEEALRLGLVDRVGQSDDVFAEGLAFAHELIATKAAP--RRTKNARGLADK 217

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
             +   +  AR + +K +  +      +D +E  +      G+  E + F E        
Sbjct: 218 EASVAAIAAARAETQKKSRGLLSPLKIVDCVEAALNLPFDEGLRFEREQFLECRESPQRA 277

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           GLVH FF +R T K P   D   +PR + ++ VIGGG MG+GIA A +   + V + E +
Sbjct: 278 GLVHAFFVERETQKSPETRDA--QPRALDRIGVIGGGTMGAGIAVALLDAGLAVTMIERD 335

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
              L +G   +E     L+ +G+LT +    AL+   G   Y    D D+VIEAV E + 
Sbjct: 336 EASLERGSAHVEKVYDALIAKGRLTHESKTRALQRFHGDTKYDALADADLVIEAVFEDMA 395

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
            K+ +F++L++ C P  +LATNTS +D++ +    S    ++G HFFSPA++M LLE+V 
Sbjct: 396 AKKAVFAQLDRVCKPGAVLATNTSYLDIDEIAASISRPQDVLGLHFFSPANIMKLLEVVV 455

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             R SA V+     + K +KKV V  G C GF  NR    Y  +A  L+  G   ++ID 
Sbjct: 456 PARVSADVVATGFELAKKLKKVAVRAGVCDGFIGNRMLAVYRAAADHLMEDGASPYQIDR 515

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+R FG P+GP+Q++DLAG  +  A  K         +    + D L + G  G+  G+G
Sbjct: 516 AVRDFGFPMGPYQVIDLAGGDIGWAARKRRAATRDPNARYVRIGDELCERGWFGQKTGRG 575

Query: 420 LYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE G++   PD  V  II+  R  + +    KP   T+++IV   L  ++NE   ++
Sbjct: 576 FYRYEDGARTGTPDAEVESIIDAERERAGV----KPRPFTDEQIVRRYLAAMINEGANIV 631

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
            EGI  R  D+D   + G  FP YRGG + +AD VG + V   ++ ++Q    F++ S  
Sbjct: 632 HEGIAQRPLDVDATLMHGFGFPRYRGGPMHYADTVGLDNVLADIRAFAQEDPLFWRASPL 691

Query: 539 LEERATKG 546
           + +   +G
Sbjct: 692 IVDLVARG 699


>gi|449473562|ref|XP_004153917.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like, partial [Cucumis sativus]
          Length = 415

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 137/245 (55%), Positives = 183/245 (74%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE + LGL+DA+V  EEL+  +R WALDI+ RRKPWI SLH+T+KL SL+
Sbjct: 85  MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 144

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +ARE+ K AR Q +K APN+     C+DV+E G+V G  +G+ KE + F+ L+  DTS+ 
Sbjct: 145 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 204

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 205 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 264

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  F+DVDMVIEAVIE++ L
Sbjct: 265 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFEDVDMVIEAVIENISL 324

Query: 241 KQKIF 245
           KQ+I 
Sbjct: 325 KQQII 329


>gi|422319042|ref|ZP_16400125.1| fatty oxidation complex alpha subunit [Achromobacter xylosoxidans
           C54]
 gi|317406310|gb|EFV86548.1| fatty oxidation complex alpha subunit [Achromobacter xylosoxidans
           C54]
          Length = 524

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 160/452 (35%), Positives = 254/452 (56%), Gaps = 15/452 (3%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            G+  E  +F + +      GL+H FFA+R T+K+P +     KPR +  V VIGGG MG
Sbjct: 73  DGLRTERALFLQCLDSPQRAGLIHAFFAERETAKIPELKQA--KPRRLDSVGVIGGGTMG 130

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
           +GIA A +   + VV+ E +   L +G + +E     LV +G+++ D+    L    G  
Sbjct: 131 AGIAVAVLDAGLPVVMVEQDEAALARGRQRVEHVYDLLVGKGRMSADERAARLARFTGAT 190

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY+   + D++IEAV E + +K+ +F++L++   P  +LATNTS +D++ + + T     
Sbjct: 191 DYAALGEADLIIEAVFEDMDVKRAVFAQLDRVAKPGAVLATNTSYLDVDRIAQATRGPAD 250

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA++M LLE+V   +T+A  +     + + ++K+PV  G C GF  NR    
Sbjct: 251 VLGLHFFSPANIMKLLEVVVGRQTAADTVATGFELARRLRKIPVRAGVCDGFIGNRILAV 310

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE----FDKAFPD 395
           + Q+A +++  G   + ID+A+R FG P+GP+Q++DLAG  +  AT K      D A   
Sbjct: 311 HRQAADMMMEDGASPYEIDAAVRDFGYPMGPYQMVDLAGGDIGWATRKRRAATRDPAL-- 368

Query: 396 RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKP 454
           R  Q P  D L + G  G+  G+G Y Y  G++   PDP VL II+  R+ + + P  +P
Sbjct: 369 RYVQIP--DRLCERGWFGQKTGRGFYLYPDGARHGTPDPEVLAIIDAERQRAGVTP--RP 424

Query: 455 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 514
            S   ++I    L  ++NE+  VL +GI +R SD+D   + G  FP YRGG + +AD VG
Sbjct: 425 FSA--EDIQRRYLAAMINEAANVLHQGIALRPSDIDMVFLSGYGFPRYRGGPMHYADRVG 482

Query: 515 ANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
              V   ++ +++    F+KPS  L E A  G
Sbjct: 483 LANVLADIRAFAKEDPAFWKPSPLLVELAESG 514


>gi|421475833|ref|ZP_15923767.1| 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein,
           partial [Burkholderia multivorans CF2]
 gi|400229573|gb|EJO59416.1| 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein,
           partial [Burkholderia multivorans CF2]
          Length = 514

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 163/461 (35%), Positives = 244/461 (52%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +E  +     +G+  E  +F + +      GLVH FFA+R  +KVP       +P  
Sbjct: 50  VDAVEAALAQPFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKVPEARRGTARP-- 107

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           + ++ V+GGG MG+GIA A +   + V + E +   L +G   +E     LV +G++T  
Sbjct: 108 IERIGVVGGGTMGAGIAIAALDAGLPVTMIERDEAALARGRAHVEKVYDALVAKGRMTPA 167

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                +  LKG   Y     VD+VIEAV E + +KQ +F+EL + C P  +LATNTS +D
Sbjct: 168 AQAARIARLKGSTSYDALAQVDVVIEAVFEDMAVKQAVFAELARVCKPGAVLATNTSYLD 227

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA+VM LLEIV   R SA V+     + + +KK+PV  G
Sbjct: 228 IDALAASIDRPADVIGLHFFSPANVMKLLEIVVPARASADVVATAFALARQLKKMPVRAG 287

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  L+  G   ++ID A+R FG P+GPFQ++DLAG  +  AT 
Sbjct: 288 VCDGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATR 347

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R+    + D L + G  G+  G+G Y Y  G++   PDP V  I+E+ R  
Sbjct: 348 KRRAATRDPRARYVEISDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIVEQERAK 407

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             I+P     + T+ EI+   L  ++NE   V+ E I +R  D+D   + G  FP YRGG
Sbjct: 408 KGIVPR----AFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGG 463

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ +++    F+KPS  L E   +G
Sbjct: 464 PMHYADTVGLANVLADIRAFAEEDPLFWKPSPLLVELVERG 504


>gi|294010130|ref|YP_003543590.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
 gi|292673460|dbj|BAI94978.1| 3,2-trans-enoyl-CoA isomerase [Sphingobium japonicum UT26S]
          Length = 705

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 175/503 (34%), Positives = 267/503 (53%), Gaps = 17/503 (3%)

Query: 48  RSLHRTDKLGSLS-----EAR-EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSG 101
           RS+ R+ +L S+S     + R E+   AR +   +    P     +  +E   V    +G
Sbjct: 189 RSVARSGELPSISSLPPAQPRPEIFDAARARLSGSGERYPALPEIIAAVEAATVLDFAAG 248

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGS 160
           +  E   FK L+  D S+ L H F A+R  S V  +  D+G+  R +   AVIG GLMG+
Sbjct: 249 MEVEKAAFKRLIETDVSKALRHGFLAERRASHVREIGADVGV--RRLDTAAVIGAGLMGT 306

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GIA       I V L E + +  ++  K+++  +   V +G+LT  +A     +++   D
Sbjct: 307 GIAQCLAAAGIEVTLLETSEQATVRSEKSVDDVLGRAVAKGRLTAKQAEAQKALIRWTTD 366

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y + ++VD+ IEAV ES+  K+ +F EL++   P  ILA+NTST+DLN +   T     +
Sbjct: 367 YGDLRNVDIAIEAVFESLEAKRAVFEELDRNLRPGAILASNTSTLDLNAIAAFTQRPADV 426

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G HFFSPA+VM LLE+VR +RT+  V+   M  G+ I KV V+ G C GF  NR    Y
Sbjct: 427 VGTHFFSPANVMRLLEVVRGDRTAPDVVKTAMQFGRRIGKVSVLSGVCDGFIGNRMVEEY 486

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            + A  LV  G   F +D A+  FG  +GPF++ DLAG  +  +  K   +  PD  + S
Sbjct: 487 FRQAMFLVEEGALPFEVDEALEEFGFSMGPFKVADLAGLDIGWSIRKRRAQERPDMPY-S 545

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
           P++D L + GR G+    G+Y Y  G     DP V   I    +  NI        +++ 
Sbjct: 546 PVLDGLCEQGRFGQKTKAGVYLYADGRTAVRDPEVERSIAAFSQSQNIARR----EISKS 601

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EIV+  +  +VNE  ++LEEGI  RASD+D   + G  FP +RGG +F AD+VG + V  
Sbjct: 602 EIVDRCVLALVNEGAKILEEGIAQRASDIDVVYLAGYGFPDFRGGPMFHADSVGLDKVVE 661

Query: 521 SLKKWSQLYGN---FFKPSRFLE 540
            +  + +L      F++P+  L+
Sbjct: 662 RMTVFERLQTRDPAFWRPAPLLQ 684


>gi|393775492|ref|ZP_10363805.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
 gi|392717542|gb|EIZ05103.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
          Length = 702

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 175/542 (32%), Positives = 273/542 (50%), Gaps = 8/542 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  + +E  ++GLID + T ++ L+ +  WA +I A+    +R       LG  +
Sbjct: 153 LMLSGRHASVDEAKRMGLIDRIATQDDPLEEACTWASEILAQ-GGIVRRTRDAQALGDSA 211

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +   ++ AR    + A  +      LD +++ I     +G+  E   F + V      G
Sbjct: 212 TSLAAVEAARAGNARKARGLFAPFQILDAVKDAIEQPFEAGIQAERARFLQCVDSPQRAG 271

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R   K P       +PR V  V VIGGG MGSGIA A +   + V++ E + 
Sbjct: 272 LVHAFFAERRVRKAPETESS--QPRPVATVGVIGGGTMGSGIAVALLDAGLQVIMVERDD 329

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L  G + +E     L+  G++   +    L+   G   Y  F   D+VIEAV E + +
Sbjct: 330 ASLQAGRQRVEKVYDRLIANGRMEVARKEAVLQRFTGATSYDAFAQADLVIEAVFEDMDV 389

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F EL++ C P  ILATNTS +D++ +    S    +IG HFFSPA++M LLEIV  
Sbjct: 390 KKAVFGELDRICKPGAILATNTSYLDIDAIAASISRPQDVIGLHFFSPANIMKLLEIVVP 449

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     +   ++KVPV  G C GF  NR  + Y + A  ++  G   + ID A
Sbjct: 450 AKVSADVVATGFALADKLRKVPVRAGICDGFIGNRILYVYREVASHMMEDGASPYEIDQA 509

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG  +GPF+  DL G  +  AT K         +    + D L +    G+  G+G 
Sbjct: 510 LEEFGYAMGPFRTNDLTGGDIGYATRKRKAATRDPNARYVRIADQLCERNWLGQKTGRGW 569

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +GS+  + DP VL +I+  R    I    +P + + ++I+   +  V+NES  VL 
Sbjct: 570 YRYPEGSRSGQHDPEVLALIDAERAERGI----QPRTFSSEDILRRYMAAVINESANVLH 625

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           + I +R  D+D   V G  FP +RGG + +AD VG + V   ++ + +    F+KPS  L
Sbjct: 626 DKIALRPLDIDVTLVHGYGFPRWRGGPMHYADTVGLDKVLADIRSFEKEDPLFWKPSPLL 685

Query: 540 EE 541
            E
Sbjct: 686 VE 687


>gi|301630327|ref|XP_002944273.1| PREDICTED: peroxisomal bifunctional enzyme-like [Xenopus (Silurana)
            tropicalis]
          Length = 1251

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 156/433 (36%), Positives = 242/433 (55%), Gaps = 11/433 (2%)

Query: 105  EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIA 163
            EA  F +LV   +++ L H+FFA+R  +K+  +  D  L+P  +RKV ++G G MG GIA
Sbjct: 809  EAAEFAQLVTSPSAKALRHLFFAEREVAKISALPCDTALRP--IRKVGIVGAGTMGGGIA 866

Query: 164  TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223
                   I  V+ EVN E L +G+  +  N      +G+LT ++    + +L+G LDY+ 
Sbjct: 867  MNFANVGIPTVVVEVNDETLQRGLGLVRRNYEASAAKGRLTAEQVAGRMALLQGALDYAA 926

Query: 224  FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 283
              + D+VIEAV E++ LKQ I ++L     P  I+ATNTST+D++++   T     ++G 
Sbjct: 927  LAECDLVIEAVFENMALKQDICAKLGAVAKPGAIIATNTSTLDVDVLARATGRSADVVGM 986

Query: 284  HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 343
            HFFSPAHVM LLE+VR   T+  V+  +M +   I KVPVV G C GF  NR    Y + 
Sbjct: 987  HFFSPAHVMRLLEVVRGAATAPDVLATIMKLAARIGKVPVVSGVCYGFIGNRMAEVYMRE 1046

Query: 344  ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF---PDRSFQS 400
            A  L+  G +  ++D+A+ + G  +GP ++LD+AG  V A T  E+ KA    PD S+++
Sbjct: 1047 AEFLIMEGAEPAQVDAAVEALGFAMGPCRMLDMAGVDVGAKTVIEYGKAGGLPPDASYRA 1106

Query: 401  PLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
             LV  L   GR+G+  G G Y Y  G  P PD  V  I  +      I    +   + + 
Sbjct: 1107 -LVQKLFALGRHGQKTGAGYYRY-AGRTPVPDAEVTRIATQLAEQHGIT---RRSDIGQD 1161

Query: 461  EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
            EI E +L+P++NE  ++L+EGI  R  D+D     G  FP +RGG ++ A+++G   +  
Sbjct: 1162 EITERLLYPLINEGWKILDEGIAYRPGDIDVVWTAGYGFPDFRGGPMWMAESMGREVIAK 1221

Query: 521  SLKKWSQLYGNFF 533
             +  ++   G+ +
Sbjct: 1222 RIAHYAATRGDAY 1234


>gi|226355857|ref|YP_002785597.1| peroxisomal bifunction [Deinococcus deserti VCD115]
 gi|226317847|gb|ACO45843.1| putative Fatty acid oxidation complex subunit alpha [Deinococcus
           deserti VCD115]
          Length = 692

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 187/546 (34%), Positives = 282/546 (51%), Gaps = 18/546 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML    I   E  +LGL+D +V  + L    R       AR  P  R   R+ + GS  
Sbjct: 152 MMLSGNPIRGAEARELGLVDELVQGDLLEGAVRFARAHADAR--PLPRISERSVEGGS-- 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              EV   AR   KKT          +D+ E        +G   EA+ F +      SRG
Sbjct: 208 --PEVFAAARESIKKTHRGQLSPSLIIDLAEMAATQPFQTGWEAEAEKFMQAKDSPQSRG 265

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R ++K+P ++        +R V +IG G MG GIA   +   I V + E   
Sbjct: 266 LRHIFFAERESAKIPGLSK-DTPTLDIRSVGIIGAGTMGGGIAMNFLNVGIPVTIVETAQ 324

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  I  N      +G++T +     + +L   L+  +  D D++IEAV E++ +
Sbjct: 325 EALDRGLGVIRRNYENSAKKGRMTMEDVEKRMALLTPTLNMEDLADADIIIEAVFENMDV 384

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K++IF++L+    P  ILATNTST+D+N +   T   + +IG HFFSPA+VM LLEIVR 
Sbjct: 385 KKEIFTKLDAIAKPGAILATNTSTLDVNEIASVTGRPESVIGLHFFSPANVMKLLEIVRA 444

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS  V+   M + K I+KV VVVG C GF  NR    Y   AR +V  G     +D++
Sbjct: 445 DKTSDSVLATSMALAKKIRKVGVVVGVCDGFVGNRMIHRYGDEARKIVEEGAAPQDVDAS 504

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGK 418
           + + GLP+GPFQ+ D+AG  +  A  +   K    R    P   +D +++ GR G+  G 
Sbjct: 505 MNALGLPMGPFQMSDMAGLDIGYAIRQHQAKV---RGEPKPDGWLDRIVERGRKGQKTGA 561

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G+Y Y++  KP+P+  +  +I   R    I     P  ++++E  + + + +VNE  ++L
Sbjct: 562 GIYDYDEQRKPRPNDEMEELISSYRAEKGIT----PREISQEESTKRLAYSLVNEGAKIL 617

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEGI  RA D+D   + G  FP+YRGG + +AD +G   V   L+K+ Q      +  R 
Sbjct: 618 EEGIAQRAGDIDVIYIYGYGFPAYRGGPMQYADEMGLQNVVADLEKYGQTPAPLLR--RL 675

Query: 539 LEERAT 544
            EE  T
Sbjct: 676 AEEGKT 681


>gi|83312089|ref|YP_422353.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Magnetospirillum magneticum AMB-1]
 gi|82946930|dbj|BAE51794.1| Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Magnetospirillum magneticum AMB-1]
          Length = 703

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 180/551 (32%), Positives = 285/551 (51%), Gaps = 16/551 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + + +  +LGL+D + + +            +A  +      + RT  +    
Sbjct: 152 LVLSGKPLPAPKAAELGLVDEIASGDLNAAALAFAKKLVAEGK-----GVRRTCDMAPKD 206

Query: 61  EAR--EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            A+  E++   + Q  KT  N       L+ +          G+  EA + K+L     +
Sbjct: 207 AAKDAEIIAARQAQVAKTMKNRTSPLKALEAMAATTTLSFAEGLRLEADISKQLEHAVEA 266

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           R + H+FFA R   K+P +T   +K R +RKV +IG G MG GIA       I V + +V
Sbjct: 267 RAMRHLFFADREVRKIPGITK-DIKARPIRKVGIIGAGTMGGGIAMCFANIGIPVTIIDV 325

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           + E L +G+  I  N    V+RG LTQ++  + + +L    DY+  KD D+ IEAV E +
Sbjct: 326 SDENLQRGLGVIRKNYERSVSRGSLTQEQLESRMGLLSASTDYAALKDADLAIEAVFEKM 385

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LK+ IF++L+   P   IL TNTST+D++ +   T     +IG HFFSPA+VMPLLEIV
Sbjct: 386 ELKKDIFAKLDAVLPAGAILGTNTSTLDIDEIANTTKRPADVIGLHFFSPANVMPLLEIV 445

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           + ++T+  V+L  + + K+IKK  VV   C GF  NR   PY + A  +V  G     ID
Sbjct: 446 QGKQTAMDVLLTALDMAKLIKKTGVVSKVCYGFIGNRMMDPYGREAERMVLEGATPAEID 505

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+  +G+ +G   + D+AG  V   T        PD         LL+ +   G+  G+
Sbjct: 506 GALEGWGMAMGILAVYDMAGVEVGDNTRIANPHMVPDDPSFYRCSTLLVANKWLGQKVGR 565

Query: 419 GLYTYEKGSKPKP-DPSVLPIIE-ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           G Y Y+   + +  DP V+ ++  E +RL+  +P  KP    + EI+E  L+ ++NE  +
Sbjct: 566 GYYRYDSPDRKRASDPEVIEMMHAEGKRLN--VPARKP---GKDEILERCLYSMINEGAK 620

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFKP 535
           +LEEGI +RASD+D     G  FP YRGG +F+AD +G   +Y  + ++ + L   ++ P
Sbjct: 621 LLEEGIALRASDIDVVYTAGYGFPRYRGGPMFYADTIGLKVIYDKIVEFQKTLDPRYWTP 680

Query: 536 SRFLEERATKG 546
           +  LE+ A  G
Sbjct: 681 APLLEKLAKAG 691


>gi|375107014|ref|ZP_09753275.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
           JOSHI_001]
 gi|374667745|gb|EHR72530.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderiales bacterium
           JOSHI_001]
          Length = 696

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 183/503 (36%), Positives = 270/503 (53%), Gaps = 14/503 (2%)

Query: 50  LHRTDKLG-SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 108
           L RT  L  +   A   L+ AR      A  +P    C+D +   +       +  E ++
Sbjct: 198 LRRTRDLKVAAPNAEAFLQFARNTVGAMAKGLPAPGKCVDAVALSLSKPFDEALRLEREM 257

Query: 109 FKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHI 167
           F  L+    SR L HVF A+RA SK+ ++  D  L  R + KV VIG G MG GI    +
Sbjct: 258 FLALMGTPESRALRHVFGAERAASKIADLPADAPL--RSIAKVGVIGAGTMGGGITMNFL 315

Query: 168 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227
              I VVL E+  E L KG+ TI  N    + +GKL  ++    + ++   L Y  F DV
Sbjct: 316 NAGIPVVLLEMKQEALDKGLGTIRRNYENSMKKGKLKPEQVEQRMGLVTPTLSYDAFADV 375

Query: 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 287
           D+VIEAV E++ +KQ++F  L++ C P  ILA+NTS ++++ +   T     ++G HFFS
Sbjct: 376 DLVIEAVFENMDVKQQVFETLDRVCKPGAILASNTSYLNIDAIAGFTKRPADVLGLHFFS 435

Query: 288 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 347
           PA+VM LLE+VR  +T+  V+   M + K IKKV VV G C GF  NR    Y  +A+ L
Sbjct: 436 PANVMRLLEVVRGAKTAPDVLATAMALAKKIKKVAVVSGVCDGFIGNRMLARYGAAAQGL 495

Query: 348 VSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLL 406
           ++ G    ++D A++ FGL +GPF++ DLAG  +  AT K   KA        P+V D L
Sbjct: 496 INAGALPQQVDGALQKFGLAMGPFRMGDLAGLDIGWATRKR--KAAEAGVEMKPIVADRL 553

Query: 407 LKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEM 465
            ++GR G+  G G Y YE G + P PDP    +I   R    +        V++ E+VE 
Sbjct: 554 CEAGRFGQKTGAGWYRYEAGQRDPIPDPVTEALIVAHRTALGL----TARKVSDAEVVER 609

Query: 466 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 525
            ++ +VNE  R+LEE I  RASD+D   + G  FP  RGG + +AD VG   V  +L+++
Sbjct: 610 CIYALVNEGARILEERIAARASDIDLVYLNGYGFPLTRGGPMLYADTVGLPNVVRTLRRF 669

Query: 526 SQLYG--NFFKPSRFLEERATKG 546
           +   G    ++P+  L + A +G
Sbjct: 670 AAEPGADASWQPAPLLVKLAEEG 692


>gi|94984861|ref|YP_604225.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
           11300]
 gi|94555142|gb|ABF45056.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus geothermalis DSM
           11300]
          Length = 695

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 190/546 (34%), Positives = 280/546 (51%), Gaps = 18/546 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML    I + E   LGL+DA+V  +  L+   +    + A  +P  R   R  K  S  
Sbjct: 152 MMLSGNPIGATEAKALGLVDALVEGD--LREGAVAFARVHADDRPLPRISERPVKDAS-- 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+   AR   KKT          +D+ E         G   EA++F +      SRG
Sbjct: 208 --PELFAAAREGIKKTHRGQLAPSLIIDLAEMAATRPFAEGWDAEARLFMQAKDSPQSRG 265

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R   K+P +T        + +V ++G G MG GIA   +   I V + E + 
Sbjct: 266 LRHIFFAEREAGKIPGLTK-DTPTTEITRVGIVGAGTMGGGIAMNFLNVGIPVTIVETSQ 324

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+ TI  N      +G+LT ++    L +L   LD +   D D++IEAV E + +
Sbjct: 325 EALDRGLATIRRNYENTAHKGRLTMEQVEQRLSLLTPTLDLTALSDADLIIEAVFEDMDV 384

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ IF  L+    P  ILATNTST+D+N +   TS  +++IG HFFSPA+VM LLEIVR 
Sbjct: 385 KKDIFRRLDSIAKPGAILATNTSTLDVNEIASVTSRPEQVIGLHFFSPANVMRLLEIVRA 444

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS  V+   + + K I KV VVVG C GF  NR    Y   AR LV  G      D+A
Sbjct: 445 DKTSDSVLATCLNLAKRIGKVGVVVGVCDGFVGNRMIHRYGDEARKLVEEGARPQDADAA 504

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGK 418
           + + GLP+GPF++ D+AG  V     +   K    R    P   +D +++ GR G+    
Sbjct: 505 MHALGLPMGPFEMSDMAGLDVGYLIRQHQAKV---RGLPKPDGWLDRIVERGRKGQKTQA 561

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G+Y Y  G +P P   +  +I + R    I    +P  ++++E+ E +++ +VNE  ++L
Sbjct: 562 GIYDYPDGRRPVPSAEIDQLIRDYRAEKGI----QPREISQEELTERLVYSLVNEGAKIL 617

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EEGI  RA D+D   + G  FP+YRGG + +AD +G   V  +L+K+ Q      K  R 
Sbjct: 618 EEGIAQRAGDIDVIYIYGYGFPAYRGGPMGYADEMGLKNVVAALEKYGQTPAPLLK--RL 675

Query: 539 LEERAT 544
            EE  T
Sbjct: 676 AEEGKT 681


>gi|209519293|ref|ZP_03268093.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
 gi|209500242|gb|EEA00298.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160]
          Length = 700

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 174/541 (32%), Positives = 276/541 (51%), Gaps = 15/541 (2%)

Query: 8   ITSEEGWKLGLIDAVVTSEE--LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR-E 64
           +++E+  + G+ID +VT  +  L+  +R +A D+  +      +  RT   G L +    
Sbjct: 160 VSAEQAHEWGVIDYLVTDRDVDLVSAARAFAQDLNCKG---TLARDRTAIKGPLKDVDLS 216

Query: 65  VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 124
           + +  R + ++    +   Q  +DV+E         G   E K F+E      S  L H+
Sbjct: 217 MFETYRQKNQRKWHGLVAPQKIVDVLEASCALTFDEGCALEKKAFQECEHSPESASLRHL 276

Query: 125 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FFA+R   KV         P  ++ V VIG G MG GIA A     + VVL +   E L 
Sbjct: 277 FFAEREAGKVRGADKA--TPLDIKSVTVIGAGTMGQGIAQACASAGLSVVLVDRTYEALE 334

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           + I  I+AN    V RG + + KA+ A  ++    D       D++IEAV E + +KQ +
Sbjct: 335 RAIVAIQANYETSVARGSMARAKADRAFNLISISCDLVAVSTCDLIIEAVFEDLGVKQSV 394

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F +L+    P  ILATNTST+D++++   T    +++G HFFSPAHVM L+E+++  +TS
Sbjct: 395 FRDLDAVAKPEAILATNTSTLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEVIKGSQTS 454

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
            +V   ++ + K ++K+ V  GN  GF  NR    Y + A  L+  G   ++ID  +  F
Sbjct: 455 DEVSATILKITKALRKIAVFAGNEEGFIGNRILGAYGREADYLLEEGATPWQIDRVLNQF 514

Query: 365 GLPIGPFQLLDLAGYGV--AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 422
           G P+G F + D+AG  V       +E     P     S L D + + GR G+  G G Y 
Sbjct: 515 GFPMGLFAMRDMAGLDVIWRIRQGQERKGTRPAYERYSVLADRICEQGRFGQKTGSGYYK 574

Query: 423 YEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
           YE G    P P +  +I +    + I    +   ++++ IV+ I+  +VNE  R+++ G 
Sbjct: 575 YE-GRTATPCPEIEALIVQVSADAGI----ERREISDEAIVQRIMCAMVNEGARIIDSGT 629

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEER 542
             RASD+D     G  FPSYRGG +FWA   G   VY  ++++ +LYG+ +KP++ L E 
Sbjct: 630 AQRASDIDIVYTNGYGFPSYRGGPMFWAQQTGLQKVYEQVQEYHKLYGDTWKPAQSLAEA 689

Query: 543 A 543
           A
Sbjct: 690 A 690


>gi|413962686|ref|ZP_11401913.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
 gi|413928518|gb|EKS67806.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. SJ98]
          Length = 694

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 177/546 (32%), Positives = 286/546 (52%), Gaps = 14/546 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  +  L D +   + LL+ +  +A   A R  P  +     D+     
Sbjct: 152 MIVSGAPVPSEKLAQTALFDELADGD-LLESALSFARRAADRGGPHPKV---RDRQIEHP 207

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A + P    C+D IE+G+  G   G+  E + F  LV    SR 
Sbjct: 208 NAEGFIQFARNSVAGVAKHFPAPHKCIDAIEKGVKEGFERGLAFERECFLALVQTPESRA 267

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA +K+ +V       R + ++ VIG G MG GIA   +   + VVL E   
Sbjct: 268 LRHAFFGERAAAKIADVPS-NTPVRKIERIGVIGAGTMGGGIAMNFLNAGLPVVLLETKQ 326

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           + L +GI TI  N    V +GKLTQ+K    + ++   L + +    D+++EAV E + +
Sbjct: 327 DALDRGIATIRRNYEAQVKKGKLTQEKVEERMALIAPTLAFGDLAQADLIVEAVFEDLSV 386

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F +L++      ILA+NTST++L+ +   T     +IG HFFSPA+VM LLE+VR 
Sbjct: 387 KEQVFRQLDEIAKSGAILASNTSTLNLDTIASFTKRPGDVIGMHFFSPANVMKLLEVVRG 446

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +T   V+  +M + K I+K  VV G C GF  NR    Y + A  ++  G    +ID A
Sbjct: 447 AKTEKDVLATVMQLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQIDRA 506

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           I +FG  +GPF++ DLAG  +  A  K   +  P+  + S + D L + GR G+  G G 
Sbjct: 507 IENFGFAMGPFRMSDLAGNDIGWAIRKRRYREQPELHY-SRVADRLCEMGRFGQKTGAGW 565

Query: 421 YTYEKGSKPKPDPSVLP--IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           Y Y+ G +       LP  ++++     +   G +   + ++EIVE ++  +VNE  ++L
Sbjct: 566 YDYQPGKR-----DALPSNVVDDMIVAYSKERGVERRKIRDEEIVERLVLSLVNEGAKIL 620

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS-QLYGNFFKPSR 537
           EEGI  +ASD+D   + G  FP +RGG + +AD +G   V  +++K++ Q  G  ++P+ 
Sbjct: 621 EEGIAGKASDIDMVYLTGYGFPLWRGGPMLYADTIGLYNVERAMRKYAKQANGYAWQPAA 680

Query: 538 FLEERA 543
            + E A
Sbjct: 681 RVTELA 686


>gi|116694675|ref|YP_728886.1| enoyl-CoA hydratase/isomerase family protein [Ralstonia eutropha
           H16]
 gi|113529174|emb|CAJ95521.1| Enoyl-CoA hydratase/isomerase family [Ralstonia eutropha H16]
          Length = 692

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 173/549 (31%), Positives = 284/549 (51%), Gaps = 20/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+     + +    ++GL+D +     L   +  +A  + A ++P  +     DK+ +  
Sbjct: 155 MVTSGTHVAASAAAEMGLVDLLTDDASLRADAVAFARKVVAEKRPLRKVRESDDKVAAAR 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+    R    +        +  +  IE  +     +G+ +E ++F EL+    S  
Sbjct: 215 GKPELFAAFRKANARRFRGFDAPEFNIRCIEAAVELPFEAGLKRERELFTELLNGTQSAA 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIATAHILNNIY-VVLKE 177
             + FFA R   +V NV D+G       VR++ ++G G MG GIA  + LN  Y V + E
Sbjct: 275 QRYYFFASR---QVWNVPDVGADTPALAVRRIGIVGAGTMGGGIAM-NFLNAGYPVTIVE 330

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            + + L +G+KTI AN      +G+L+       + +L   LD     D D++IEAV E+
Sbjct: 331 SSQQALDRGLKTIRANYDNTARKGRLSAADVEARMALLTPTLDLQLLADADLIIEAVFEN 390

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +KQ++F +L++      ILATNTS +D+N++   +S  + +IG HFFSPA+VM LLE+
Sbjct: 391 MEVKQELFGKLDRIAKAGAILATNTSALDVNVIAAASSRPEAVIGLHFFSPANVMKLLEV 450

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR ++T+  VI   M + + I KV  +VG C GF  NR      + A+ LV  G   + +
Sbjct: 451 VRGDKTAKPVIRTAMELARKIGKVAALVGVCPGFVGNRMLAQRQREAQKLVLDGALPWDV 510

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D  +  FG P+GPF + DLAG  +     K         S  S L ++L +  R G+  G
Sbjct: 511 DRVLYDFGFPMGPFAMSDLAGLDLGWVREK---------SSGSTLREVLCEMDRRGQKAG 561

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
            G Y Y++    KP     P++E+  R      G     V+E+EI++  ++P++NE  ++
Sbjct: 562 AGYYDYDEQRNAKPS----PVVEQVIRDFAAKQGRNSRVVSEQEILDRCIYPMINEGAKI 617

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           L+EG  +RASD+D   V G  +P YRGG + +AD +G + V  +++++  LYG  F P+ 
Sbjct: 618 LQEGKAIRASDIDVIWVNGYGWPVYRGGPMIYADTIGLDKVLAAMRRYEALYGADFAPAP 677

Query: 538 FLEERATKG 546
            LEE A +G
Sbjct: 678 LLEELAAQG 686


>gi|186471950|ref|YP_001863268.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phymatum STM815]
 gi|184198259|gb|ACC76222.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phymatum
           STM815]
          Length = 706

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 171/547 (31%), Positives = 271/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K I +++  K+GL+D V  S+++L     +A  + +   P +R       L    
Sbjct: 157 LMLSGKHIGAQDALKMGLVDRVGQSDDVLTEGLTYAQQLLSEHAP-VRRTRDAQGLADTD 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                + +AR    K +  +      +D +   +      G+  E   F E +       
Sbjct: 216 AGAAAIAVARADTAKKSRGLLSPLKIVDCVNAALTLPFEDGLRFERARFIECLDSPQRAA 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH F A+R   K P       +PR +    V+GGG MG+GIA A +   + V + E + 
Sbjct: 276 LVHAFQAERQVQKAPETRSA--QPRPIASAGVVGGGTMGAGIAVALLDAGLPVTMIERDD 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   ++    GL+ +G+LT D     L    G   Y    + D+VIEAV E + +
Sbjct: 334 ASLARGRAHVDKVYDGLIAKGRLTHDAKAKKLARFAGSTSYDALAEADVVIEAVFEDMAV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL++ C P  +LATNTS +D++ +    +    +IG HFFSPAHVM LLE+V  
Sbjct: 394 KQAVFAELDRVCKPGAVLATNTSYLDIDAIAAGIARPQDVIGLHFFSPAHVMKLLEVVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA V+     + K ++KVPV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 454 ARVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRMLAVYRAAADHLMEEGASPYQIDKA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R  G P+GP+Q++DLAG  +  AT K         +    + D L + G  G+   +G 
Sbjct: 514 VRELGFPMGPYQVIDLAGGDIGWATRKRRASTRDPNARYVQIPDRLCERGWFGQKTSRGF 573

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y YE G +   PDP V  II+  R  + I P     + ++++IV   +  ++NE   V+ 
Sbjct: 574 YRYEAGQRAGTPDPEVEAIIDAERERAGITPR----AFSDEQIVRRYMAAMINEGANVIH 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP++RGG + +AD +G   +   ++++ +    F+KPS  L
Sbjct: 630 ERIALRPLDVDVTLMNGFGFPAWRGGPMHYADTIGLPALLADIREFEKRDPLFWKPSPLL 689

Query: 540 EERATKG 546
            E   +G
Sbjct: 690 VELVERG 696


>gi|115525778|ref|YP_782689.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodopseudomonas palustris BisA53]
 gi|115519725|gb|ABJ07709.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Rhodopseudomonas palustris BisA53]
          Length = 694

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 156/450 (34%), Positives = 253/450 (56%), Gaps = 19/450 (4%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV--PNVTDIGLKPRGVRKVAVIGGGLM 158
           G+ KE + F +LV+ D S+   + FFA+R  +KV  P  T    +PR V KVA+IG G M
Sbjct: 250 GLKKEREGFMKLVVSDQSKAQRYAFFAEREAAKVEVPEAT----RPRPVNKVAIIGAGTM 305

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G GIA +     I V L E   E L +G+  ++ N      RG +  D     + ++ GV
Sbjct: 306 GGGIAMSFANAGIPVTLIETGEEQLKRGLGIMQKNYEATAARGGIPADAPAKRMGLITGV 365

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           +     KD D++IEAV E++ +K+++F+ L+    P  +LA+NTS ++++ +   T    
Sbjct: 366 VGLEHVKDADLIIEAVFETMAVKKEVFTALDAYAKPGAVLASNTSYLNIDEIAATTKRPQ 425

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
            ++G HFFSPA+VM L EIVR  +T+   +L  +++ + I KVP VVG C GF  NR   
Sbjct: 426 DVLGMHFFSPANVMKLCEIVRAAKTAPDALLTAVSIARKIAKVPAVVGVCDGFVGNRMLA 485

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
             ++ A  L+  G    ++D+ +  FG+P+GPF + DLAG  +   + +       DR  
Sbjct: 486 QRAKQAEKLLFEGALPQQVDAVVTKFGMPMGPFAMGDLAGLDIGWRSRQ-------DRGI 538

Query: 399 QSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISV 457
           +S + D L ++GR G+  GKG Y YE GS+ P PDP V  +I++  +  ++    K  ++
Sbjct: 539 KSEIADALCEAGRFGQKTGKGYYKYEAGSRAPLPDPEVETLIDQTLQKLDL----KRRAI 594

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
            ++EI+E +++P++NE  R+LEE I  R SD+D   + G  +P YRGG + +AD+VG   
Sbjct: 595 DDQEILERMMYPMINEGARILEEKIAARPSDIDVIWLYGYGWPIYRGGPMHYADSVGLKQ 654

Query: 518 VYTSLKKWSQLYGN-FFKPSRFLEERATKG 546
           +   L  +++   +   +P+  L   A +G
Sbjct: 655 IAERLSHYAKATNDPSLEPAPLLARLAAEG 684


>gi|90417373|ref|ZP_01225298.1| fatty oxidation complex, alpha subunit [gamma proteobacterium
           HTCC2207]
 gi|90330815|gb|EAS46084.1| fatty oxidation complex, alpha subunit [marine gamma
           proteobacterium HTCC2207]
          Length = 704

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 182/537 (33%), Positives = 289/537 (53%), Gaps = 17/537 (3%)

Query: 16  LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           L LID ++  ++LL+ +  +   + A + P ++    T    S   A  +   +R Q  +
Sbjct: 170 LNLIDHIIDGDDLLEGALAYTQQLLADKAPLLKVRDITIDPASFDPA--IFDQSRKQLSR 227

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 135
            A      Q  +D IE         G+  E ++F +L     S  + H+FFAQR  +K+ 
Sbjct: 228 RARGQLAPQRIVDCIEAAATTSFDEGLATEGRLFMDLKDDSQSAAMRHMFFAQREANKIK 287

Query: 136 NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
            +    +K R ++ VA+IGGG MG GIA       I V + E+N E L +G+  I+ N  
Sbjct: 288 GIGKETVK-RPIQSVAIIGGGTMGGGIAMNFANVGIPVTMLEINDEALQRGLGIIDKNYS 346

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
             V +G+L++++ +  + ++ G  DY +    D+VIEAV E++ +KQ++F++L+K C P 
Sbjct: 347 MTVKKGRLSEEQKHGCMSLISGTTDYQDLATADLVIEAVFENLEIKQQVFAKLDKVCKPG 406

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTS  D+N +   T   + +IG HFFSPA++M LLEIVR ++TS +VI   M V 
Sbjct: 407 AILASNTSYQDVNAIAAATQRPEDVIGLHFFSPANIMKLLEIVRADKTSDEVIATSMAVA 466

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K I KVPV+ G C GF  NR F  Y +  +L +  G    +ID  +  +G+ +GP  + D
Sbjct: 467 KAIGKVPVLSGVCFGFIGNRMFSEYGRETQLCLIEGASAEQIDRVMEDYGMAMGPLAVSD 526

Query: 376 LA----GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK- 430
           LA    GY V    S+E +K  P RSF   + D L++ GR G+  G G Y Y+  ++ + 
Sbjct: 527 LAGIDIGYKVREGLSEE-EKGDP-RSF--CVADALVEQGRLGQKTGAGFYQYDPQTRARI 582

Query: 431 PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 490
            DP V  +IE      N+         +++EI + +L P++NE  ++L+EGI  R+ D+D
Sbjct: 583 SDPEVNALIEAKAAEYNV----SRRDFSDEEIRDRLLLPLINEGAKILQEGIAQRSGDID 638

Query: 491 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEERATKG 546
              V G  FP Y GG + +AD +G   VY  L    Q  G ++++P+  ++  A  G
Sbjct: 639 VVYVFGYGFPVYHGGPMQYADHLGLETVYQKLNALHQQSGEDYWQPADLIKTLAETG 695


>gi|172061837|ref|YP_001809489.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia ambifaria MC40-6]
 gi|171994354|gb|ACB65273.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia ambifaria
           MC40-6]
          Length = 711

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 273/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  +++E   LGL+D +  S++ L     +A ++ +   P  R+      L   +
Sbjct: 162 LMLTGRHASADEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAPARRT-REARGLADRA 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR    K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 221 SAQAAIDAARADLPKKSRGLFSPAKIVDAVEAALTQSFDAGMKLERSLFLQCIDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P       +P  V ++ V+GGG MG+GIA A +   + V + E + 
Sbjct: 281 LVHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDE 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 339 ASLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL + C P  +LATNTS +D++ +         ++G HFFSPA+VM LLEIV  
Sbjct: 399 KKAVFAELARVCKPGAVLATNTSYLDIDELAATIDRPADVVGLHFFSPANVMKLLEIVVP 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            R SA+V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 459 ARVSAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+   +G 
Sbjct: 519 VREFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTARGY 578

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I  + R    I     P + ++ EI+   L  ++NE   V+ 
Sbjct: 579 YLYPDGARVGTPDPEVEAIAADERAKKGIT----PRAFSDDEILRRYLAAMINEGANVVH 634

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ ++     F+KPS  +
Sbjct: 635 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFANEDPLFWKPSPLI 694

Query: 540 EERATKG 546
            E   +G
Sbjct: 695 VELVERG 701


>gi|393776806|ref|ZP_10365100.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
 gi|392716163|gb|EIZ03743.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia sp. PBA]
          Length = 698

 Score =  281 bits (718), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 163/465 (35%), Positives = 255/465 (54%), Gaps = 10/465 (2%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L  AR Q  +  P  P  + C+D +E  ++    + + +E   F EL     SR L H+F
Sbjct: 218 LAAAREQVARRTPREPAKRRCIDAVEASLLLPFEAALERELAYFHELSASPESRALRHLF 277

Query: 126 FAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FA+R  + + ++  D  ++P  +   AV+G G MG+GIA   +   I V L E +   L 
Sbjct: 278 FAERTAASISDIPKDTPVRP--IHSAAVVGAGTMGAGIAQCLLDAGIPVKLLEASRAALD 335

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           +G+ +I    +    +G++   +    LK+L  VLDY+   DVD+VIEAV E   +K K+
Sbjct: 336 RGVASITRQYQRARDKGRIDDARMAARLKLLTPVLDYAALGDVDIVIEAVFEQFDVKSKV 395

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F  L+    P  ILATNTS +D+N +   T     +IG HFFSPAHVM LLE+VR E+T 
Sbjct: 396 FQSLDAVMKPGAILATNTSMLDINRLAATTGRAGDVIGTHFFSPAHVMRLLEVVRGEQTR 455

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
           A V++ +M + K + K  VV   C GF  NR    Y + A  L+  G    ++D A+  F
Sbjct: 456 ADVLVTVMRLAKKLGKTAVVARVCDGFIGNRMIEQYLRQAGFLLEEGATPAQVDRAVEQF 515

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKS-GRNGKANGKGLYTY 423
           GL +GPF++ D+AG  +     K   +  P   F S + DLL+++  R G+  G+G Y Y
Sbjct: 516 GLAMGPFRMSDMAGNDIGYDIRKRRSRETPS-LFYSRIPDLLVETLDRKGQKVGRGWYDY 574

Query: 424 EKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
           ++GS +  P   V  +I + R+  N+    +   ++++EIV+ +++ +VNE  R+L++G 
Sbjct: 575 QEGSYQAIPSAEVDDMIVQFRKAHNL----QARQISDEEIVKRLVYALVNEGYRILDDGT 630

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
             RASD+D A   G  FP  RGG +F+AD VG + V   +  +++
Sbjct: 631 AQRASDIDVAYATGYGFPDTRGGPMFYADEVGLDKVLADMAVFAR 675


>gi|334345738|ref|YP_004554290.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
 gi|334102360|gb|AEG49784.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
          Length = 687

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/538 (33%), Positives = 279/538 (51%), Gaps = 26/538 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-WALDIAARRKPWIRSLHRTDKLGSL 59
           M++L   I++    ++GL+D VV  E  L  S + +A ++ A R+     +   ++L   
Sbjct: 149 MIVLGAPISAMRAAEIGLVDEVVDDEVDLAGSAIAFARNVGAVRRTRDLPMDAEEQLFEK 208

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
             AR   K+  L A K         AC+  I          GV  E  +F ELV    S+
Sbjct: 209 FAARHARKIDTLDAPK---------ACIAAIRAATELPFGEGVAHERSLFAELVEGAQSK 259

Query: 120 GLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            L H FFA+RA +K+ N+  DI L+P  VR+V VIG G MG GIA   +   I V + E 
Sbjct: 260 ALCHAFFAERAAAKIDNLPADIALRP--VRRVGVIGAGTMGGGIAMNFLSTGIAVTIVET 317

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
               L +G+  I AN    V RG+L  ++A  A+ +L   L + +  D D+VIEAV E++
Sbjct: 318 EQAALDRGVGVIRANYGASVARGRLKAEQAEAAMSLLTPTLVFEDLADCDLVIEAVYENM 377

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K++IF  L++   P  +LA+NTS +D++ +   T     + G HFFSPA+VM L+E+V
Sbjct: 378 EVKKQIFCRLDQVARPGAMLASNTSYLDIDEIASVTGRPQDVFGLHFFSPANVMKLVEVV 437

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R  +TS  ++   M + + + KVPVV   C GF  NR   P    A  L+  G    +ID
Sbjct: 438 RGAQTSLDIVATAMALARKVGKVPVVARVCHGFIGNRMMHPRKVEAFKLLEEGATPAQID 497

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
               +FG+P+GPFQ++DLAG  +            P+R   + +++ L   GR G+  G 
Sbjct: 498 RVHLNFGMPMGPFQMMDLAGCDIGWHRD-------PERV--TTILEALCAEGRWGQKTGG 548

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G Y Y+   K  P P    II + R  + I+       ++++EI    ++ +VNE   VL
Sbjct: 549 GFYDYDTERKASPSPVAQAIIADFRERAGIV----SREISDEEITVRTIYTIVNEGAAVL 604

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           E G   R+SD+D   + G  +P + GG +FWA+ VG + +   L+K+S+  G  F+ S
Sbjct: 605 EGGYAQRSSDIDAVGLYGYGWPRHTGGPMFWAEHVGFDTIVAGLEKYSEELGPDFQIS 662


>gi|423018204|ref|ZP_17008925.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
           xylosoxidans AXX-A]
 gi|338778707|gb|EGP43176.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Achromobacter
           xylosoxidans AXX-A]
          Length = 706

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 159/451 (35%), Positives = 250/451 (55%), Gaps = 15/451 (3%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+  E  +F + +      GL+H FFA+R T+K+P +     +PR + +V VIGGG MG+
Sbjct: 256 GLRTERALFLQCLDSPQRAGLIHAFFAERETAKIPELKQA--RPRRLERVGVIGGGTMGA 313

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GIA A +   + VV+ E +   L +G + +E     L  +G+++ D+    L  L G  D
Sbjct: 314 GIAVALLDAGLPVVMVEQDDAALARGRQRVEHVYDLLAGKGRMSADERAARLARLTGATD 373

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y+   D D+VIEAV E + +KQ +F++L++   P  +LATNTS +D++ + + T    R+
Sbjct: 374 YAALADADLVIEAVFEDMDVKQAVFAQLDRVVRPDAVLATNTSYLDVDRIAQATRDPGRV 433

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G HFFSPA++M LLE+V    T+A  +     + + ++K+ V  G C GF  NR    +
Sbjct: 434 LGLHFFSPANIMKLLEVVVGRDTAADTVATGFELARRLRKIAVRAGVCDGFIGNRILAVH 493

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE----FDKAFPDR 396
            Q+A +++  G   + ID+A+R FG P+GP+Q++DLAG  +  AT K      D A   R
Sbjct: 494 RQAADMMMEDGASPYDIDTAVRDFGYPMGPYQMVDLAGGDIGWATRKRRAATRDPAL--R 551

Query: 397 SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPI 455
             Q P  D L + G  G+  G+G Y Y  G++   PDP VL II   R+ + +     P 
Sbjct: 552 YVQIP--DRLCERGWFGQKTGRGFYLYPDGARHGTPDPQVLAIIAAERQRAGV----TPR 605

Query: 456 SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGA 515
           +   ++I    L  ++NE+  VL E I +R SD+D   + G  FP +RGG + +AD VG 
Sbjct: 606 AFGAEDIQRRYLAAMINEAANVLREDIALRPSDIDMVFLSGYGFPRHRGGPMHYADRVGL 665

Query: 516 NYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
             V   ++ +++    F+KPS  L E A  G
Sbjct: 666 ANVLADIRAYAKEDPAFWKPSPLLVELAESG 696


>gi|171322242|ref|ZP_02911085.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria MEX-5]
 gi|171092437|gb|EDT37786.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria MEX-5]
          Length = 549

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 175/546 (32%), Positives = 273/546 (50%), Gaps = 8/546 (1%)

Query: 2   MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 61
           ML  +  +++E   LGL+D +  S++ L     +A ++ +   P  R       L   + 
Sbjct: 1   MLTGRHASADEALALGLVDRLAHSDDTLAEGLAYAQELVSLGAP-ARRTRDAQGLADRAS 59

Query: 62  AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 121
           A+  +  AR    K +  +      +D +E  +     +G+  E  +F + +      GL
Sbjct: 60  AQAAIDAARADLPKKSRGLFSPAKIVDAVEAALTLSFDAGMKLERSLFLQCIDSPQRAGL 119

Query: 122 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           VH FFA+R  +K P       +P  V ++ V+GGG MG+GIA A +   + V + E +  
Sbjct: 120 VHAFFAEREAAKAPEARRASARP--VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDEA 177

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +K
Sbjct: 178 SLARGRAHVEKVYDGLVAKGRMTPAAHAARLARFKGSTSYDALAQADVVIEAVFEDMAVK 237

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           + +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV   
Sbjct: 238 KAVFAELARVCKPGAVLATNTSYLDIDELAASVDRPADVIGLHFFSPANVMKLLEIVVPA 297

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
           R SA+V+     + K +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A+
Sbjct: 298 RVSAEVVATAFALAKQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRAV 357

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
           R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+   +G Y
Sbjct: 358 REFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKTARGYY 417

Query: 422 TYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
            Y  G++   PDP V  I+ + R    I P     + ++ EI+   L  ++NE   V+ E
Sbjct: 418 LYPDGARVGTPDPEVEAIVADERAKKGITPR----AFSDDEILRRYLAALINEGANVVHE 473

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
            I +R  D+D   + G  FP YRGG + +AD +G   V   ++ +++    F+KPS  + 
Sbjct: 474 KIALRPLDVDAVFLHGYGFPRYRGGPMHYADTIGLANVLADIRAFAKEDPLFWKPSPLIV 533

Query: 541 ERATKG 546
           E   +G
Sbjct: 534 ELVERG 539


>gi|395005834|ref|ZP_10389697.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
 gi|394316158|gb|EJE52894.1| 3-hydroxyacyl-CoA dehydrogenase [Acidovorax sp. CF316]
          Length = 707

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 177/549 (32%), Positives = 281/549 (51%), Gaps = 11/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K + ++     GL+DAV    + +        ++ AR+ P   +     +L   +
Sbjct: 157 LMLSGKHLNTQAALAAGLVDAVAEGSDPVAAGLAHVRELLARQAPVRPTSALPGRLADKA 216

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR- 119
            A+  L + R    K A  +      +D ++  +      G+  E   F  L  LD+ + 
Sbjct: 217 AAQAELDVLRADTAKAARGLFSPLKIIDCVQAALDLPFDQGMQFERAQF--LACLDSPQR 274

Query: 120 -GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            GL+H FFA+R  +KVP        PR +  +AVIGGG MG+GI  + +   + V + E 
Sbjct: 275 AGLIHAFFAEREVAKVPEAK--AAAPRPITAIAVIGGGTMGAGITVSALDAGLPVTMIER 332

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           +   + +G   +E     LV +G+++ +     L    G   Y +    D+VIEAV E +
Sbjct: 333 DEASIARGRAHVEKVYDALVAKGRMSAEAKAATLARYTGSTRYEDIASADLVIEAVFEDI 392

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+ +F EL++ C P  +LATNTS +D++ +   T+    +IG HFFSPA++M LLEIV
Sbjct: 393 EVKKTVFRELDRVCKPGAVLATNTSYLDIDAIAAATARPQDVIGLHFFSPANIMKLLEIV 452

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
              R SA V+     + K +KKVPV  G C GF  NR    Y Q+A  L+  G   + ID
Sbjct: 453 VPVRVSADVVATAFELAKRLKKVPVRAGVCDGFIGNRILAVYKQAADYLMEDGASPYEID 512

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
           +A R FG P+GPFQ+ DLAG  +  AT K        ++    + D + + G  G+  G+
Sbjct: 513 AAARGFGYPMGPFQVTDLAGGDIGWATRKRRAATRDPKARYVEIADRICERGWFGQKTGR 572

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y Y +G++  + DP VL I++  R    ++P  +P S    EI+   +  +VNE  +V
Sbjct: 573 GFYLYPEGARVGQSDPEVLAIVDAERARKGVVP--RPFSA--DEIMRRYMAAMVNEGAKV 628

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           + EGI +R  D+D   + G  FP +RGG + WAD  G   V   +++++Q    F+KP+ 
Sbjct: 629 VAEGIALRPLDVDVTFLSGYGFPRHRGGPMKWADMQGLPQVLADIREFAQDDPLFWKPAA 688

Query: 538 FLEERATKG 546
            LE+   +G
Sbjct: 689 LLEQLVAEG 697


>gi|398846806|ref|ZP_10603760.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
 gi|398252208|gb|EJN37411.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
          Length = 701

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 193/567 (34%), Positives = 292/567 (51%), Gaps = 36/567 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGS 58
           MML    I + +G  LGLID +    +++L+++  +A D+ A+   P    +   D L S
Sbjct: 154 MMLSGDPIDARQGLALGLIDRLPEPGQDMLELACAFARDLLAQPTAPAATPIPLADGLAS 213

Query: 59  -LSEAREVLKLARLQAKKTAPNMPQH------QACLDVIEEGIVHGGYSGVLKEAKVFKE 111
               +RE    A+L A+K     P         AC   + EG+         +E  +F+E
Sbjct: 214 DFFASRE----AQLVARKPGQRAPLRVLAAVRAACELPLAEGLA--------QEQALFRE 261

Query: 112 LVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNI 171
            +    +  L H FFA+R   +VP + D     R +  VAVIG G MG+GIA   I   I
Sbjct: 262 ALQDPQATALRHQFFAEREALRVPGI-DANTTLRNIANVAVIGAGTMGAGIAMNFINAGI 320

Query: 172 YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 231
            V L E+  E L +G+  I  N    + RGKLT ++    + +L+G LDY++  D D+VI
Sbjct: 321 PVRLLELKPEALDRGLAQIRKNYESSIKRGKLTPEQLEQRMSLLQGTLDYADLADADLVI 380

Query: 232 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHV 291
           EAV E + +KQ++F  L++ C P  ILA+NTST+D++ +   T     ++G HFFSPA+V
Sbjct: 381 EAVFEDLSIKQQVFRTLDRVCKPGAILASNTSTLDVDRIAGCTQRPQDVVGLHFFSPANV 440

Query: 292 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG 351
           M LLE+VR   T+  V+   + + K I K+PVV G C GF  NR   PY + A  LV  G
Sbjct: 441 MRLLEVVRGRATAPDVLATTLKIAKRIGKLPVVSGVCFGFIGNRMLEPYGREAHRLVLEG 500

Query: 352 VDVFRIDSAIRSFGLPIGPFQLLDLAG--YGVAAATSKEFDKAFPDRSFQSPLVDLLLKS 409
               ++D  +   GL +G F + DLAG   G     S+  + A     F+  L D L   
Sbjct: 501 ASPAQVDKVLTGLGLAMGVFAMYDLAGIDVGYLVRQSRRSEIAHDPSYFR--LADELYHL 558

Query: 410 GRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
           GR+G+ +G+G Y YE G +   DP V  I  +      I+   +PIS  + EI +  LF 
Sbjct: 559 GRHGQKSGRGFYRYE-GRERIEDPEVEQIAAQLAAKLGII--RRPIS--DAEIHDRCLFM 613

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE  ++L+EGI +R+ D+D     G  FP++RGG + +A  +G + V T +++     
Sbjct: 614 LINEGLQLLDEGIALRSGDIDLVWTNGYGFPAWRGGPLHYARELGLDKVLTGIEQLHDQL 673

Query: 530 GNF----FKPSRFLEERATKGIPLSAP 552
           G +     +P+  L  R      L AP
Sbjct: 674 GAYGRMWLQPAPLL-RRMASSTKLGAP 699


>gi|254476527|ref|ZP_05089913.1| peroxisomal bifunctional enzyme [Ruegeria sp. R11]
 gi|214030770|gb|EEB71605.1| peroxisomal bifunctional enzyme [Ruegeria sp. R11]
          Length = 697

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 158/448 (35%), Positives = 243/448 (54%), Gaps = 8/448 (1%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+ +E ++F EL+  D  +GL+H FF++RA SK+P + D+   PR V  V VIGGG MG+
Sbjct: 245 GLRRERELFTELMESDQRQGLIHAFFSERAVSKLPELADV--TPRDVASVGVIGGGTMGA 302

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGVL 219
           GIATA +L  + VVL E ++       + I  N+ G + RGK++QD+ +      L+   
Sbjct: 303 GIATAALLAGVSVVLVERDASAAEAAGQRISGNLSGALKRGKISQDQFDTMTGDALELAT 362

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           +Y     VD+VIEAV E + +K+++F  L+  C P  ILA+NTS +D+N +   TS    
Sbjct: 363 EYGALGQVDLVIEAVFEDMDVKREVFEALDANCKPGAILASNTSYLDINEIAAATSRPQD 422

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           +IG HFFSPAHVM LLE+V  ++T   V+     +GK ++K+ V  G C GF  NR    
Sbjct: 423 VIGLHFFSPAHVMKLLEVVVADQTDPDVVATGFALGKRLRKISVRSGVCDGFIGNRIMNA 482

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
           Y ++A  +V  G   ++ID  +  FG  +GPF + DLAG  +  A  K        R   
Sbjct: 483 YRKAADYMVLDGASPYQIDRVMTGFGFAMGPFAVGDLAGLDIGWAARKRRAPHRDPRERV 542

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
               D+L + G  G+  GKG Y YE G +   P+P V   I + +    +     P   +
Sbjct: 543 VHFADMLCEGGDFGQKTGKGFYVYEAGKRGGTPNPDVEKYIAQDQADQGV----SPREFS 598

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           + EI+   +  +VNE+ +V+ EGI  R  D+D   + G  FP Y GG + WAD  G   +
Sbjct: 599 DAEILRRYMCAMVNEAAKVVGEGIARRPLDVDMVLLFGYGFPRYHGGPLKWADLQGLAGI 658

Query: 519 YTSLKKWSQLYGNFFKPSRFLEERATKG 546
              ++ +++    F++P+  L+    +G
Sbjct: 659 LADIETYAKEDPYFWQPAPLLQTLVAEG 686


>gi|77458979|ref|YP_348485.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Pseudomonas fluorescens Pf0-1]
 gi|77382982|gb|ABA74495.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas fluorescens Pf0-1]
          Length = 703

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 180/557 (32%), Positives = 291/557 (52%), Gaps = 25/557 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWA---LDIAARRKPWIRSLHRTDKL 56
           ++L  + I +E    LG++D + +S E+LL+ +R +A   ++  A  +P     +  + L
Sbjct: 154 LILSGEQIDAERARMLGILDRISSSTEQLLEEARAYANELIECCAPARPAEAWPNPAEDL 213

Query: 57  GSLSEAREVLKLARLQAKKTAPNM---PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 113
                AR  ++       + AP +       ACL  +EEG+V        +E  +FK+  
Sbjct: 214 PDDFLARYRVEHEPRWKSRLAPRLVLSALEAACLLPLEEGLV--------RELTLFKQAE 265

Query: 114 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 173
               S+ L HVFFA++   + P + D     R + KVAVIG G +G GIA +     I V
Sbjct: 266 ASRQSKALRHVFFAEQDARRTPRI-DTADPSRKINKVAVIGAGTLGGGIAMSFADVGIPV 324

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            L +++   L +G+K +  N +  V RGKL+  +    +++L G LDY++  D D++IEA
Sbjct: 325 ALMDLDGRTLDRGLKRVRENYQLSVKRGKLSAVQMQQRMELLFGTLDYADLSDADLIIEA 384

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E +  K ++F  LE  C P  ILATNTS++D++ + +  S    +IG HFFSPA+VM 
Sbjct: 385 VCEKMESKHQVFLALESVCKPGAILATNTSSLDIDALAKMVSRPQDVIGMHFFSPANVMR 444

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           L+EIV  + T+  V+  +M + + I K+PV+ GN  G   NR   PY++ A  LV  G  
Sbjct: 445 LVEIVLCQTTAPDVVTAVMDIARRIGKLPVISGNSAGSIGNRMLEPYAREAHRLVLEGAT 504

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
             ++D+ + S  L +G F +LDLAG  V+        +A         L + L   GR G
Sbjct: 505 PVQVDAVLTSLDLNMGVFSMLDLAGIDVSFLMRDANREAIAHDQSYCCLAEELYALGRYG 564

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           +  G+G Y YE G  P+ D  V+ + E+  R  N+       ++ + EI +  LF ++NE
Sbjct: 565 QKTGRGFYLYE-GRSPREDREVIMLAEQLAREHNVTRR----NIEDLEIHDRCLFVMINE 619

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF- 532
             R+L+EGI +RASD+D   + G  FP++ GG + +A+ +G   V + +  +    G + 
Sbjct: 620 GIRLLDEGIALRASDIDLVWINGYGFPAHLGGPMHYAEQLGLETVLSRIHHYRSALGEYG 679

Query: 533 ---FKPSRFLEERATKG 546
              F+P+  LE     G
Sbjct: 680 EMWFRPAALLERLVAAG 696


>gi|163857274|ref|YP_001631572.1| fatty oxidation complex alpha subunit [Bordetella petrii DSM 12804]
 gi|163261002|emb|CAP43304.1| putative fatty oxidation complex alpha subunit [Bordetella petrii]
          Length = 705

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 161/463 (34%), Positives = 251/463 (54%), Gaps = 11/463 (2%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D ++  +      G+  E  +F + +       LVH FFA+R T+K P       +PR 
Sbjct: 242 VDAVQAALDQPFDEGLRTERALFLQCLDSPQRAALVHAFFAERETAKAPETRQA--RPRP 299

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           + ++ VIGGG MG+GIA A +   + VV+ E N E L +G   +E     LV +G+L  D
Sbjct: 300 LERLGVIGGGTMGAGIAVAMLDAGLPVVMVEQNDEALARGRARVEQVYDLLVKKGRL--D 357

Query: 207 KANNALKMLK--GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264
            A  A +M +  G   Y    D D+++EAV E + +K  +F+EL++   P  +LATNTS 
Sbjct: 358 AAGKAERMARYTGATRYEALADADLIVEAVFEDMDVKLAVFAELDRIAKPGAVLATNTSY 417

Query: 265 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 324
           +D+N +   TS    ++G HFFSPA++M LLEIV    ++   +     + + ++K PV 
Sbjct: 418 LDINRIAAATSRPGDVLGLHFFSPANIMKLLEIVVGANSAPDTVATGFELARRLRKTPVR 477

Query: 325 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 384
            G C GF  NR    Y Q+A L++  G   ++ID A+R+FG P+GP+Q+ DLAG  +  A
Sbjct: 478 AGVCDGFIGNRILAVYRQAADLMLEDGASPYQIDDAVRAFGYPMGPYQVADLAGGDIGWA 537

Query: 385 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECR 443
           T K        R     + D L + G  G+  G+G Y Y  G++   PDP VL II+  R
Sbjct: 538 TRKRRAATRDPRLRYVQIPDRLCERGWFGQKTGRGYYLYPDGARTGTPDPEVLAIIDAER 597

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
           + + +     P   T+++I+   L  +VNE+  VL EGI +R  D+D   + G  FP +R
Sbjct: 598 QRAGVT----PRQFTQEDILRRYLAAMVNEAANVLREGIALRPLDIDVVFLSGYGFPRFR 653

Query: 504 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           GG + +AD VG   +   +++++Q   +F++PS  L E A  G
Sbjct: 654 GGPLHYADQVGLPRILADIREFAQEDPHFWQPSPLLVELADSG 696


>gi|334140782|ref|YP_004533988.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
           PP1Y]
 gi|333938812|emb|CCA92170.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Novosphingobium sp.
           PP1Y]
          Length = 709

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 174/547 (31%), Positives = 284/547 (51%), Gaps = 31/547 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRS---LHRTDK 55
           +M   + + +EE   +GL+DAV+  ++L+  +  +A ++ A   R P +R    +   D+
Sbjct: 166 IMTSGRQVKAEEALAIGLLDAVLPGQDLVMEAVAFARNVVAEGARTPRVRDREDMLEVDR 225

Query: 56  LGSLSEAREVLKLARLQAKKTAPNM--PQHQACLDV-IEEGIVHGGYSGVLKEAKVFKEL 112
                  R  +K A       AP       +A L +  EEG+ H        E ++   L
Sbjct: 226 KDPELVDRFFIKNAHRFRGLDAPTAIGAAVRAALSLPFEEGLAH--------EQQLCLAL 277

Query: 113 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY 172
                S  L ++FFA+R T++VP++    ++ R V  + VIG G MG GI    +   + 
Sbjct: 278 AEGHQSEALRYLFFAERQTTRVPDLPPNTMQ-RPVASIGVIGAGTMGGGITMTFLDAGLP 336

Query: 173 VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
           V L E +   L +G   I  +      +G+++ D+    + +L   LD +  +D D VIE
Sbjct: 337 VTLVETSKAALERGCSNIRRHYEASAQKGRMSADEVETRMSLLSPRLDLTALRDADFVIE 396

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + LK+ +F++L+    P  ILA+NTS +DL+ + + TS  +R++G HFFSP +VM
Sbjct: 397 AVFEDLALKRDLFAQLDALAAPDAILASNTSFLDLDAIADATSQPERVLGLHFFSPVNVM 456

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            L+E+VRT RT  + +   M++ + I KVPV+   C GF  NR   P    A +++  G+
Sbjct: 457 RLVEVVRTTRTKPENVATAMSLARHIGKVPVLSAVCDGFIANRLMAPRGAEAEIMMLEGI 516

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
            + RID  +  +G  IG FQ++D+ G  V    + E       R+    LV     +GR 
Sbjct: 517 PIERIDKVLTDYGFGIGHFQMMDMVGLDVVGRGASE-------RTVMGDLV----AAGRL 565

Query: 413 GKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           G  +G G Y Y+   +P P       I    R   ++   +   V+++E++  +L PVVN
Sbjct: 566 GLKSGSGYYDYDGKHRPLPSKLTETTIAAVAREKGVIGSDQ---VSDEELLTRLLCPVVN 622

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E   +LEEGI +RASD+D A+VLG ++P++ GG + WA+  G   +  SL+K   ++G  
Sbjct: 623 EGAHILEEGIALRASDIDVAAVLGYNWPAHTGGPMAWAEHYGLARIVESLRKLEAMHGAR 682

Query: 533 FKPSRFL 539
           FKP+R L
Sbjct: 683 FKPARLL 689


>gi|398383587|ref|ZP_10541655.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
 gi|397724603|gb|EJK85068.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium sp. AP49]
          Length = 691

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 172/547 (31%), Positives = 271/547 (49%), Gaps = 16/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +M     +++    ++GLID +    +L   +   A  +    +P ++   RT+KL    
Sbjct: 154 LMTAGGPVSARAAKEMGLIDELAAEGQLRADAIALAQRVLDEGRPLLKVRDRTEKLDEAR 213

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+    R    +        +A +  +E  +      G++ E ++F EL     S  
Sbjct: 214 GKPEIFADFRKANARKFRGFNAPEAIIRCVEAALELPFDDGMIFERQLFNELQADSQSAA 273

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             HVFFA+R  +KV ++  D  + P  + KV VIG G MG GIA       I V L E N
Sbjct: 274 QRHVFFAERQAAKVDSLPADTPILP--IAKVGVIGAGTMGGGIAMNFANAGIPVTLVETN 331

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G++ I  N      +GK+  +  +  + +L G +   +  D D++IEAV E + 
Sbjct: 332 EDALFRGLRIIRGNYETTAKKGKMKPEDVDTRMGLLTGSIAMEDLADCDLIIEAVFEQID 391

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F+ L++   P  ILATNTS +D++ +   TS  + + G HFFSPA+VM LLE+VR
Sbjct: 392 VKREVFTRLDRIAKPGAILATNTSYLDIDDIAAATSRPNSVAGLHFFSPANVMKLLEVVR 451

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
           T  T  ++I   M + K I K+ V+VGN  GF  NR     +  A  L+  G   + +D 
Sbjct: 452 TRDTKPEIIATAMKLAKTIGKIGVLVGNGYGFVGNRILAARNTQADQLILEGATPWAVDK 511

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG  +G FQ+ DL G  V            P  +  + + ++L + GR+G+    G
Sbjct: 512 VLYDFGFAMGHFQMRDLVGLDVGWN---------PKTTSSANVREILNEMGRHGQKTKGG 562

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  K  P P  + +IE+      I+       V++ EI + ILF +VNE  R+L+
Sbjct: 563 FYDYDENRKQTPSPVAMQVIEDFAAKQGIVRR----DVSDAEIQDRILFAMVNEGARILD 618

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI  RASD+D   + G  +P YRGG +FWAD  G   V   LK     +G  F PS  +
Sbjct: 619 EGIASRASDIDIVWITGYGWPKYRGGPMFWADLQGLPTVLDRLKALEAAHGAAFTPSPLI 678

Query: 540 EERATKG 546
           E    +G
Sbjct: 679 ERLVAQG 685


>gi|406976712|gb|EKD99078.1| hypothetical protein ACD_23C00145G0001, partial [uncultured
           bacterium]
          Length = 446

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 159/447 (35%), Positives = 244/447 (54%), Gaps = 7/447 (1%)

Query: 106 AKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATA 165
           A+ F+  +      GLVH FFA+RA    P   ++   PR +  V VIGGG MGSGI  A
Sbjct: 1   AEAFQTCLGSPQRAGLVHAFFAERAAGHSPVAPEV--LPRAISSVGVIGGGTMGSGICVA 58

Query: 166 HILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225
            +   + VV+ E + + L  G+  ++     LV  G+ T++   N+L  ++G +DY++F 
Sbjct: 59  LLDAGLSVVMLERDEKSLEAGLARVKKVYSRLVESGRATEELTTNSLNRIRGTVDYADFS 118

Query: 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF 285
           DVDMVIEA  E + +K+ IF  L+  C    ILATNTS +D+N++    S    +IG HF
Sbjct: 119 DVDMVIEAAFEDLEVKKGIFKTLDAVCKKGAILATNTSYLDVNLIAAAVSRPHDVIGLHF 178

Query: 286 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSAR 345
           FSPA+VM LLE+V   + +  V+     + + +KK+PV  G C GF  NR  F Y ++A 
Sbjct: 179 FSPANVMKLLEVVVPAKVADDVVATGFDLARRLKKIPVRSGVCDGFIGNRILFTYREAAS 238

Query: 346 LLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDL 405
            ++  G   + ID A+  FG  +GPF+  DL G  +  AT +  D      +    + D+
Sbjct: 239 YMLEDGASPYDIDQALEDFGFAMGPFRTNDLTGGDIGWATRRRKDATRNPAARYVQIADM 298

Query: 406 LLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 464
           L + G  G+  G+G Y Y +G  K  PD  VL +IE+ R+   +     P   +  +IVE
Sbjct: 299 LYERGWLGQKTGRGYYRYPEGERKGLPDDEVLALIEQERQSRGLT----PRHFSHAQIVE 354

Query: 465 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 524
             +  ++NE+ +VLE+GI +R SD+D   V G  FP +RGG + +AD +G   V   L +
Sbjct: 355 RYMAALINEASKVLEDGIALRPSDIDVVMVNGYGFPRWRGGPMKYADDLGLQSVVGILVQ 414

Query: 525 WSQLYGNFFKPSRFLEERATKGIPLSA 551
            +     F+ PS+ L+  A++G   S+
Sbjct: 415 LAHEDVLFWSPSKLLQRLASEGKTFSS 441


>gi|390576846|ref|ZP_10256891.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
 gi|389931084|gb|EIM93167.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
          Length = 707

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 181/554 (32%), Positives = 275/554 (49%), Gaps = 12/554 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K I  +E  K+GL+D V  S+++L     +   +     P +R       L    
Sbjct: 158 LMLSGKHIGEQEALKIGLVDRVGQSDDVLAEGLAYVQQLLVEHAP-VRRTRDAQALSDKE 216

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   +  AR    K +  +      +D +E  +      G+  E K F E +       
Sbjct: 217 AATAAVTTARADTAKKSRGLLSPLKIVDCVEAALNLPFDDGLRFERKQFLECLDSPQRAA 276

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH F A+R   K P       +PR +    V+GGG MG+GIA A +   + V + E + 
Sbjct: 277 LVHAFQAEREVQKAPETRRA--QPRPIASAGVVGGGTMGAGIAVALLDAGLPVTMIERDD 334

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G   IE    GL+ +G+LT D     L    G   Y    DVD+VIEAV E + +
Sbjct: 335 ESLARGRAHIEKVYDGLIAKGRLTSDAKAKKLARFIGSTSYEALADVDIVIEAVFEDMAV 394

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL++ C    +LATNTS +D++ +    S    +IG HFFSPAH+M LLE+V  
Sbjct: 395 KQAVFAELDRVCKQGAVLATNTSYLDIDAIAASMSRPQDVIGLHFFSPAHIMKLLEVVVP 454

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
              SA V+     + K ++KVPV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 455 AHVSADVVATSFDLAKKLRKVPVRAGVCDGFIGNRMLAVYRAAADHLMEDGASPYQIDKA 514

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF-PD-RSFQSPLVDLLLKSGRNGKANGK 418
           +R FG P+GP+Q++DLAG  +  AT K       PD R  Q P  D L + G  G+   +
Sbjct: 515 VREFGFPMGPYQVIDLAGGDIGWATRKRRAATRNPDARYVQIP--DRLCERGWFGQKTKR 572

Query: 419 GLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y Y++G +   PD  V  II   R  + + P     + ++++IV   +  ++NE   V
Sbjct: 573 GFYRYDEGKRAGTPDAEVEAIIVAERERAGVTPR----TFSDEQIVRRYMAAMINEGANV 628

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           + E I +R  D+D   + G  FP+YRGG + +AD +    +   ++++ +    F+KPS 
Sbjct: 629 IHERIALRPLDVDVTLINGFGFPAYRGGPMHYADTISLPALLADIREFEKQDPLFWKPSP 688

Query: 538 FLEERATKGIPLSA 551
            L E   +G  L++
Sbjct: 689 LLVELVERGETLAS 702


>gi|254283934|ref|ZP_04958902.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
 gi|219680137|gb|EED36486.1| peroxisomal bifunctional enzyme [gamma proteobacterium NOR51-B]
          Length = 696

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 180/545 (33%), Positives = 281/545 (51%), Gaps = 22/545 (4%)

Query: 10  SEEGWKLGLIDAVVTSEELLK----VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           +E+    GLID VV  + L      V RL A D A RR+        +D      E RE 
Sbjct: 159 AEQALTSGLIDQVVQGDLLAGAVDYVHRLIAED-APRRRARDLPFSLSD------EDREA 211

Query: 66  LKLAR--LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           +  AR  L  K    + PQ    LD IE        SG+ +E ++F   +    S  + H
Sbjct: 212 IASARKSLAKKTRGEHAPQR--ILDCIEAAATLDFNSGLARERELFDACMTDPQSAAMRH 269

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +FFA+R  +K+  + D  + PR +  V +IG G MG GIA       I V L ++NS+ +
Sbjct: 270 MFFAERQAAKIQGM-DPSVAPRDIGSVGIIGAGTMGGGIAMCFAQAGIPVTLLDMNSDAV 328

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
             G+  I  N    V RG+ ++++ N  +  ++G  DY++  + D+VIEAV E++ +KQ 
Sbjct: 329 TAGLDRIRKNYAISVKRGRFSEEQVNAIMANIEGSSDYADLAETDLVIEAVFENLAVKQD 388

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           +F  L+  C    ILA+NTS   ++ +   TS    ++G HFFSPA+VM LLE+VR  +T
Sbjct: 389 VFRSLDSVCKADAILASNTSYQSIDDIAAVTSRPQSVLGTHFFSPANVMKLLEVVRGAQT 448

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
             ++I   M VGK I KVPV+ G C GF  NR    Y + A+L +  G    +ID A+  
Sbjct: 449 DDEIIATAMAVGKKIGKVPVLAGMCYGFIGNRMLRSYGREAQLCLIEGATPAQIDGAMER 508

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 423
           +G+ +GP  + DLAG  +     ++       +     + D L++ GR G+ +G G Y Y
Sbjct: 509 WGMAMGPIAVGDLAGLDIGYKAREQLTPEQKGKPASYIVADRLVEMGRLGQKSGAGYYQY 568

Query: 424 EKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
           +  ++ +  DPSV+ +  +C     I    K  S+T++EIV+ +   + NE  R+LEEGI
Sbjct: 569 DPETRARIEDPSVIELAAQCAAELGI----KQRSITDEEIVDRLTLALANEGARILEEGI 624

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW-SQLYGNFFKPSRFLEE 541
             RASD+D     G  FP +RGG ++  +A G +     +K   + L  + ++ +  L++
Sbjct: 625 AQRASDIDVVYCFGYGFPRHRGGPMWTIEARGLDNAVQRMKALGNSLDADNWQVAPLLQQ 684

Query: 542 RATKG 546
            A  G
Sbjct: 685 LAESG 689


>gi|432486149|ref|ZP_19728064.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE212]
 gi|433174264|ref|ZP_20358789.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE232]
 gi|431015358|gb|ELD28913.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE212]
 gi|431692008|gb|ELJ57453.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE232]
          Length = 714

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 30/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K P        P  +  V ++GGGLMG+GIA        + V +K+
Sbjct: 283 QALRSIFFASTDVKKDPGSD---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E+
Sbjct: 340 INPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEN 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI
Sbjct: 400 LELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEI 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  I
Sbjct: 460 IPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ 
Sbjct: 520 DAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRK 578

Query: 416 NGKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           NG+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  +
Sbjct: 579 NGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQARLS------------APQVAERCVMLM 626

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG
Sbjct: 627 LNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYG 686

Query: 531 NFFKPSRFLEERATKG 546
           + F P   L E   +G
Sbjct: 687 SRFTPCERLVEMGARG 702


>gi|427411688|ref|ZP_18901890.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
           51230]
 gi|425709978|gb|EKU73001.1| hypothetical protein HMPREF9718_04364 [Sphingobium yanoikuyae ATCC
           51230]
          Length = 691

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 171/541 (31%), Positives = 270/541 (49%), Gaps = 16/541 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +M     ++++   ++GLID +    +L   +   A  +    +P ++   RT+KL    
Sbjct: 154 LMTAGSPVSAKAAKEMGLIDELAIEGQLRADAIALAQRVLDEGRPLLKVRDRTEKLDEAR 213

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+    R    +        +A +  +E  +      G+  E ++F EL     S  
Sbjct: 214 GKPEIFADFRKANARKFRGFNAPEAIIRCVEASLDLPFDEGMTFERQLFNELQADSQSAA 273

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             HVFFA+R  +KV ++  D  + P  + KV VIG G MG GIA       I V L E N
Sbjct: 274 QRHVFFAERQAAKVDSLPADTPILP--IAKVGVIGAGTMGGGIAMNFANAGIPVTLVETN 331

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G++ I  N      +GK+  +  +  + +L G +   +  D D++IEAV E + 
Sbjct: 332 EDALFRGLRIIRGNYETTAKKGKMKPEDVDTRMGLLTGSIAMEDLADCDLIIEAVFEQID 391

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F +L++   P  ILATNTS +D++ +   TS  D ++G HFFSPA+VM LLE+VR
Sbjct: 392 VKREVFGKLDRIAKPGAILATNTSYLDIDDIAAATSRPDSVVGLHFFSPANVMKLLEVVR 451

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
           T+ T  ++I   M + K I K+ V+VGN  GF  NR     +  A  L+  G   + +D 
Sbjct: 452 TKDTKPEIIATAMKLAKTIGKIGVLVGNGYGFVGNRILAARNTQADQLILEGATPWAVDK 511

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG  +G FQ+ DL G  V            P  +  + + ++L + GR+G+    G
Sbjct: 512 VLYDFGFAMGHFQMRDLVGLDVGWN---------PKTTSSANVREILNEMGRHGQKTKGG 562

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  K  P P  + +IE+         G     +++ EI + ILF +VNE  R+L+
Sbjct: 563 FYDYDENRKQTPSPVAMQVIEDFAAKQ----GMTRRDISDAEIQDRILFAMVNEGARILD 618

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI  RASD+D   + G  +P YRGG +FWAD  G   V   LK     +G  F PS  +
Sbjct: 619 EGIASRASDIDIVWITGYGWPKYRGGPMFWADLQGLPTVLDRLKALEAAHGAAFTPSPLI 678

Query: 540 E 540
           E
Sbjct: 679 E 679


>gi|381202863|ref|ZP_09909972.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Sphingobium yanoikuyae
           XLDN2-5]
          Length = 691

 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 272/547 (49%), Gaps = 16/547 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +M     ++++    +GL+D +    +L   +   A  +    +P ++   RT+KL    
Sbjct: 154 LMTAGSPVSAKAAKGMGLVDELAVEGQLRADAIALAQRVLDEGRPLLKVRDRTEKLDEAR 213

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E+    R    +        +A +  +E  +      G+  E ++F EL     S  
Sbjct: 214 GKPEIFADFRKANARKFRGFNAPEAIIRCVEASLDLPFDEGMTFERQLFNELQADSQSAA 273

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             HVFFA+R  +KV ++  D  + P  + KV VIG G MG GIA       I V L E N
Sbjct: 274 QRHVFFAERQAAKVDSLPADTPILP--IAKVGVIGAGTMGGGIAMNFANAGIPVTLVETN 331

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G++ I  N      +GK+  +  +  + +L G +   +  D D++IEAV E + 
Sbjct: 332 EDALFRGLRIIRGNYETTAKKGKMKPEDVDTRMGLLTGSIAMEDLADCDLIIEAVFEQID 391

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+++F++L++   P  ILATNTS +D++ +   TS  D ++G HFFSPA+VM LLE+VR
Sbjct: 392 VKREVFAKLDRIAKPGAILATNTSYLDIDDIAAATSRPDSVVGLHFFSPANVMKLLEVVR 451

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
           T+ T  ++I   M + K I K+ V+VGN  GF  NR     +  A  L+  G   + +D 
Sbjct: 452 TKDTKPEIIATAMKLAKTIGKIGVLVGNGYGFVGNRILAARNTQADQLILEGATPWAVDK 511

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG  +G FQ+ DL G  V            P  +  + + ++L + GR+G+    G
Sbjct: 512 VLYDFGFAMGHFQMRDLVGLDVGWN---------PKTTSSANVREILNEMGRHGQKTKGG 562

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  K  P P  + +IE+      I        +++ EI + ILF +VNE  R+L+
Sbjct: 563 FYDYDENRKQTPSPVAMQVIEDFAAKQGITRR----DISDAEIQDRILFAMVNEGARILD 618

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EGI  RASD+D   + G  +P YRGG +FWAD  G   V   L+     +G  F PS  +
Sbjct: 619 EGIASRASDIDIVWITGYGWPKYRGGPMFWADLHGLPTVLDRLRALEAAHGAAFTPSPLI 678

Query: 540 EERATKG 546
           E    +G
Sbjct: 679 ERLVAQG 685


>gi|334342888|ref|YP_004555492.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
 gi|334103563|gb|AEG50986.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
          Length = 685

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 185/554 (33%), Positives = 288/554 (51%), Gaps = 35/554 (6%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL----GSLS 60
            K I +++   LG+IDA+    +L + +  +A  I A  KP +R   R +KL    G+  
Sbjct: 157 GKPIKAKQALHLGMIDALAEEGKLREDAIAFARRILAEGKPLLRVRDRNEKLEGAKGNPG 216

Query: 61  EAREVLKL-AR-LQAKKTAPNMPQH-QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
              + LK  AR  +  K   N+ +  QA +D   +       +G  +E ++F+EL     
Sbjct: 217 LFDDYLKKNARAFRGFKAPTNIVRAIQAAVDTAPDF-----EAGSRRETELFRELEPSTE 271

Query: 118 SRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
           S+   + FFA+R T+K+P++  D+   P  ++ V VIG G MG GIA   +   + V L 
Sbjct: 272 SQAQRYYFFAERETAKIPDIGKDVPTLP--IQTVGVIGAGTMGGGIAMNFLNIGVPVTLM 329

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E++ E L +GI  I  N      +G+LTQD+    + ++   +       VD+VIEAV E
Sbjct: 330 EMSQEALDRGIAVIRRNYESAAKKGRLTQDQVEQRMALITPAIGLEALSQVDLVIEAVFE 389

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +K+ +F++L+  C    ILA+NTS +D++ +   TS  + ++G HFFSPA+VM LLE
Sbjct: 390 EMGVKKDVFAKLDGICKQGAILASNTSFLDVDEIAAATSRPEWVVGLHFFSPANVMRLLE 449

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +VR ++TS +V+   M +GK I KVPV+   C GF  NR     S  A  ++  G    +
Sbjct: 450 VVRGDKTSKEVVATAMALGKKIGKVPVLSRVCFGFIANRIMAKRSAEASAIILEGPSPQQ 509

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +D A+  +G  +GPFQ+ DL G  V    S E       RS    LV L     R G+  
Sbjct: 510 VDKALYDYGFAMGPFQMNDLVGLDVIGRGSTE-------RSVAGDLVKL----DRLGQKK 558

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
             G Y Y++  K  P P    +I +  +   +   G     ++ +IV  +L+PVVNE  +
Sbjct: 559 NGGYYDYDENRKATPSPVAAQVIADFAQFKGVENKGPQ---SDADIVARLLYPVVNEGAK 615

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           +LEEGI +RASD+D A++LG ++P Y GG +FW D +G   +   LK          +PS
Sbjct: 616 LLEEGIALRASDIDVAAILGYNWPVYTGGPMFWGDTIGLPKIVEGLKALG------IEPS 669

Query: 537 RFLEERATKGIPLS 550
             L E+A  G   +
Sbjct: 670 NLLLEKAAAGTSFT 683


>gi|157161829|ref|YP_001459147.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli HS]
 gi|432671414|ref|ZP_19906943.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE119]
 gi|166972669|sp|A8A2L0.1|FADJ_ECOHS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|157067509|gb|ABV06764.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli HS]
 gi|431210333|gb|ELF08395.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE119]
          Length = 714

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 30/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K P        P  +  V ++GGGLMG+GIA        + V +K+
Sbjct: 283 QALRSIFFASTDVKKDPGSD---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E+
Sbjct: 340 INPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEN 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI
Sbjct: 400 LELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEI 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  I
Sbjct: 460 IPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ 
Sbjct: 520 DAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRK 578

Query: 416 NGKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           NG+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  +
Sbjct: 579 NGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLM 626

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG
Sbjct: 627 LNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYG 686

Query: 531 NFFKPSRFLEERATKG 546
           + F P   L E   +G
Sbjct: 687 SRFTPCERLVEMGARG 702


>gi|330818421|ref|YP_004362126.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia gladioli BSR3]
 gi|327370814|gb|AEA62170.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
           gladioli BSR3]
          Length = 712

 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 181/552 (32%), Positives = 294/552 (53%), Gaps = 17/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + +E   +LGL+D V  S++ L     +A ++ ++R P +R       L   +
Sbjct: 162 LMLSGRHVGAEAARELGLVDRVAASDDTLAEGLAYAQELLSKRAP-VRRTRDAQGLADRA 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  +  AR +  K +  +   Q  ++ +E  +V     G+ +E ++F E +      G
Sbjct: 221 AAQAAIDAARAEVAKRSRGLFSPQRIVEAVEAALVLPFDEGMKRERELFVECLDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H FFA+R  +++P  +  G +PR + +V VIGGG MG+GIA A +   + V+L E + 
Sbjct: 281 LIHAFFAEREAARLPGAS--GAEPREIARVGVIGGGTMGAGIAVAVLDAGLPVILVERDD 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   I      LV +G+L+    +  +  L G   Y    +VD+VIEAV E + +
Sbjct: 339 TALAQGRARIAKVYDALVAKGRLSDAARDERMARLAGSTVYDALAEVDLVIEAVFEDLAV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIV----GEKTSSQDRIIGAHFFSPAHVMPLLE 296
           KQ +F EL +   P  +LATNTS +D++ +    GE+ +    +IG HFFSPA++M LLE
Sbjct: 399 KQAVFEELAQVAKPGVVLATNTSYLDIDAIAASAGERAAD---VIGLHFFSPANLMKLLE 455

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           IV   + + +V+       K ++KV V  G C GF  NR    Y  +A  L+  G   ++
Sbjct: 456 IVLPAQVAPEVVATAFAFAKRLRKVAVRAGVCDGFIGNRLLAVYRAAADYLMEDGASPYQ 515

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS-PLVDLLLKSGRNGKA 415
           ID AIR FG P+GP+Q++DLAG  +  AT K    A  D + +   + D L + G  G+ 
Sbjct: 516 IDRAIRGFGFPMGPYQVIDLAGGDIGWATRKR-RAATRDPALRYVAIADRLCERGWFGQK 574

Query: 416 NGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
             +G Y Y +G++  +PD  V  II   R    I     P   +++ IV   L  ++NE+
Sbjct: 575 TQRGFYRYPEGARVGEPDAEVEAIIAAERAAKGI----APREFSDEAIVRRYLAAMINEA 630

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            +VLEEGI +R  D+D   V G  FP +RGG + +AD +G   V   ++++++    F++
Sbjct: 631 AKVLEEGIALRPLDIDVVLVHGYGFPRHRGGPLHYADTLGLAEVLAEIRRYAEEDPVFWR 690

Query: 535 PSRFLEERATKG 546
           P+  L E A +G
Sbjct: 691 PAPLLVELAGRG 702


>gi|332308240|ref|YP_004436091.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
           4H-3-7+YE-5]
 gi|332175569|gb|AEE24823.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Glaciecola sp.
           4H-3-7+YE-5]
          Length = 705

 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 180/559 (32%), Positives = 291/559 (52%), Gaps = 20/559 (3%)

Query: 10  SEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKL 68
           +E+   +GLID +V   ++L+  ++ +A  +     P  RS        ++       K 
Sbjct: 159 AEKALSIGLIDHLVEHDQDLVAAAQKYAQQVLNEGLPIRRSSQSPIDKQNIDSDWFDKKR 218

Query: 69  ARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 128
           A L  +      PQH   +D +E+ +      G+  E + F   V  + ++ + H+FFAQ
Sbjct: 219 AELSKRARGQIAPQH--IVDCLEKALNAEFVEGMQFEREAFLNCVTSEQAKAMRHLFFAQ 276

Query: 129 RATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187
           R  +KV  V+ D   +P  ++ VA+IG G MG GIA       I V L E+++E L KG+
Sbjct: 277 RLAAKVKEVSPDTSKRP--IKSVAIIGAGTMGGGIAMNFANVGIPVTLLELSAESLTKGL 334

Query: 188 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 247
           + IE N    V++G+L++ +    L ++ G   Y E   VD+VIEAV E V +K+++F +
Sbjct: 335 QLIEKNYAISVSKGRLSESQKAQRLALISGSTSYQELNQVDLVIEAVFEDVEIKKQVFRK 394

Query: 248 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 307
           L++ C    ILATNTS  D++ + + T     +IG HFFSPA+VM LLE+VR  +T+  V
Sbjct: 395 LDEVCKVGAILATNTSYQDVDAIAQVTKRPQDVIGLHFFSPANVMKLLEVVRGAQTADDV 454

Query: 308 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           I   M +   I K+PV+ G C GF  NR    Y + ++L +  G    ++DSA+ ++G  
Sbjct: 455 ITTSMALATTIAKIPVLSGVCYGFIGNRLLSVYLRQSQLCLLHGATPEQVDSAMTNWGAA 514

Query: 368 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP----LVDLLLKSGRNGKANGKGLYTY 423
           +GP  + DLAG  +         +   D    SP    + D +  +GR G+    G Y Y
Sbjct: 515 MGPLAMNDLAGIDIGFKAR----QGLSDDKKGSPEVYAIADAMYHAGRLGQKTAVGYYRY 570

Query: 424 EKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
           +  ++ +  DP  L IIE       I    +    TE+EI+  ++  +VNE   VL +GI
Sbjct: 571 DPETRARINDPDALAIIEAQSAKFGIPRNAQ----TEQEILNRMIIALVNEGANVLHDGI 626

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEE 541
             R+SD+D   + G  FP+YRGG + +AD++G   V+  +  ++  +GN ++ PS  L+E
Sbjct: 627 AQRSSDIDLVYIFGYGFPAYRGGPMHYADSIGTKKVFEMVCDFASKFGNTYWTPSPLLKE 686

Query: 542 RATKGIPLSAPVSSSSTSR 560
            A K +  S   +  S S+
Sbjct: 687 LAEKNLSFSDWDAQQSNSK 705


>gi|420250967|ref|ZP_14754168.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
 gi|398059407|gb|EJL51260.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
          Length = 698

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 177/545 (32%), Positives = 284/545 (52%), Gaps = 23/545 (4%)

Query: 8   ITSEEGWKLGLIDAVVTSEE--LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + +E+  + G+ID +VT ++  L+  +  +A D+ ++      +L R   LG++    + 
Sbjct: 158 VPAEQAHEWGVIDYLVTDQDVDLVSAATAFAQDLISKG-----TLAR--DLGAIKGPVKD 210

Query: 66  LKLARLQA-----KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           + LA  +A     +K    +   Q  +DV+E         G   E K F+E      S  
Sbjct: 211 VDLAVFEAYRQKNQKKWRGLVAPQKIVDVLEASCALTFDEGCALEKKAFQECEHSPESAS 270

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R   KVP  TD    P  ++ VAVIG G MG GIA A     + VVL +   
Sbjct: 271 LRHLFFAEREAGKVPG-TDKA-TPLDIKSVAVIGAGTMGQGIAQACANGGMSVVLVDRTY 328

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L + I  I+ N    V RG + + KA+ A  ++    D       D+VIEAV E + +
Sbjct: 329 EALERAIVAIQGNYETSVARGSMARAKADRAFNLISISSDLVAASKCDLVIEAVFEDLGV 388

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F +L+    P  ILATNTST+D++++   T    +++G HFFSPAHVM L+E+++ 
Sbjct: 389 KQSVFKDLDAVAMPEAILATNTSTLDIDLIANVTRRPQQVVGMHFFSPAHVMKLVEVIKG 448

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            +TS +V   ++ V K ++K+ V  GN  GF  NR    Y + A  L+  G   ++ID  
Sbjct: 449 SKTSDEVSATILKVTKALRKIAVFAGNEEGFIGNRILGAYGREADYLLEEGATPWQIDRV 508

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ--SPLVDLLLKSGRNGKANGK 418
           +  FG P+G F + D+AG  V     +E ++     +++  S L D + + GR G+  G 
Sbjct: 509 LNQFGFPMGLFAMRDMAGLDVIWRIRQEREQKGTRPAYERYSVLADRICELGRFGQKTGS 568

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G Y YE G    P P +  +I +    + I    +   ++++ IV+ I+  +VNE  R++
Sbjct: 569 GYYKYE-GRTATPCPDIEALIVQVSADAGI----ERREISDEAIVQRIMCAMVNEGARII 623

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           +     RA D+D     G  FPSYRGG +FWA   G   VY  ++++ +LYG+ ++P++ 
Sbjct: 624 DSRTAQRAGDIDIVYTNGYGFPSYRGGPMFWAQQTGLQKVYEKVQEYHELYGDTWRPAQS 683

Query: 539 LEERA 543
           L E A
Sbjct: 684 LAEAA 688


>gi|254463027|ref|ZP_05076443.1| peroxisomal bifunctional enzyme [Rhodobacterales bacterium
           HTCC2083]
 gi|206679616|gb|EDZ44103.1| peroxisomal bifunctional enzyme [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 711

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 177/552 (32%), Positives = 280/552 (50%), Gaps = 23/552 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSE----ELLKVSRLWALDIAARRKPWIRSLHRTDKL 56
           M+   + +++ E  +LG++D V   E     L    R+  LD     +P +  + R + +
Sbjct: 165 MITSGRHVSAPEALELGILDEVEEGEVEAIGLAYAQRI--LDAGLGPRP-VGQMPRPEVV 221

Query: 57  GSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
              +     +K  R Q            AC   I+ G+ H        E  +F  L+   
Sbjct: 222 DFDTAYEAAMKRGRGQIAPATAIRSIEGACHKGIDAGLEH--------ERNLFMALLNSP 273

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
              G+VH FF +RA SK+P +   G+ PR V  + VIGGG MG+GIA A +L+ + V + 
Sbjct: 274 QREGMVHAFFNERAVSKLPELK--GVAPREVSAIGVIGGGTMGAGIAVAALLSGLDVTMI 331

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDYSEFKDVDMVIEAVI 235
           E +++    G + +   ++G V RGKLT +K +  +    +    Y    D D+VIEA  
Sbjct: 332 ERDADAAKAGAERVSDILQGSVKRGKLTNEKFDAIMAGRFRASDSYEALGDADLVIEAAF 391

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +K+ IF+EL++ C    +LA+NTS +D+N +   TS    ++G HFFSPAHVM LL
Sbjct: 392 EEMGVKKTIFAELDRVCKKGAVLASNTSYLDVNEIAASTSRPADVLGLHFFSPAHVMKLL 451

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EIV    T+  V+     +GK+++K+ V  G C GF  NR    Y   A  +V  G   F
Sbjct: 452 EIVVAADTAPDVVATGFALGKMMRKIAVRSGVCDGFIGNRILKTYRTCADHMVLDGASPF 511

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
            ID+A+ +FG  +GPF++ DLAG  +  AT K        R   +   D + ++G  G+ 
Sbjct: 512 EIDTAMTAFGFAMGPFEVADLAGLDIGWATRKRLAPTRDARERVATYADKMCEAGHFGQK 571

Query: 416 NGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            G+G Y YEKG +   PD +V  +IE  RR   I     P + ++ EI    +  +VNE+
Sbjct: 572 TGQGYYVYEKGKRGGTPDVNVTALIEAERRELGI----TPRAFSQDEIQRRYMCAMVNEA 627

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            +V+ EGI  R  D+D   + G  FP + GG + WAD  G + +   ++ +++    F++
Sbjct: 628 AKVVGEGIARRPLDVDMVLLFGYGFPRHWGGPLKWADLQGLDGILADIQSYAKEDDFFWQ 687

Query: 535 PSRFLEERATKG 546
           P++ LE     G
Sbjct: 688 PAQLLERLVAAG 699


>gi|449471586|ref|XP_004153352.1| PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional
           protein MFP-a-like, partial [Cucumis sativus]
          Length = 332

 Score =  277 bits (709), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 135/240 (56%), Positives = 179/240 (74%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML SK +  EE + LGL+DA+V  EEL+  +R WALDI+ RRKPWI SLH+T+KL SL+
Sbjct: 93  MMLTSKPVKGEEAFSLGLVDAIVPREELISAARKWALDISERRKPWIISLHKTNKLESLA 152

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +ARE+ K AR Q +K APN+     C+DV+E G+V G  +G+ KE + F+ L+  DTS+ 
Sbjct: 153 DAREIFKFARAQVRKQAPNLKHPLVCIDVVETGVVSGPRAGLQKEIEDFQVLLHADTSKS 212

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFFAQR T+KVP V+D+GL PR + KVAVIGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 213 LIHVFFAQRGTTKVPGVSDLGLTPRRINKVAVIGGGLMGSGIATALILSNYPVILKEVNE 272

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           ++L  G+  ++AN++  V +G +T +K    + +LKGVLDY  FKDVDMVIEAVIE++ L
Sbjct: 273 KFLEAGLGRVKANLQSRVRKGTMTPEKFERTISLLKGVLDYESFKDVDMVIEAVIENISL 332


>gi|424902006|ref|ZP_18325522.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia thailandensis MSMB43]
 gi|390932381|gb|EIP89781.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia thailandensis MSMB43]
          Length = 708

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 183/554 (33%), Positives = 271/554 (48%), Gaps = 22/554 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLK-----VSRLWALDIAARRKPWIRSLHRTDK 55
           +ML  +   +EE   LGL+D +  S++ L      V  L A   +ARR          D 
Sbjct: 159 LMLSGRHAPAEEALTLGLVDRLAHSDDTLAEGLAYVHELLAAGASARRT--------RDA 210

Query: 56  LGSLSEAREVLKLARLQAK--KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 113
            G    A     L   +A   K +  +      +D +   +      G+  E ++F E +
Sbjct: 211 QGLADRAAAEAALDAARADVAKKSRGLFSPAKIVDAVAAALAQPFDEGLRTERRLFVECL 270

Query: 114 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 173
                 GLVH FFA+R  +K P        PR + ++ V+GGG MG+GIA A +     V
Sbjct: 271 DSPQRAGLVHAFFAEREAAKSPETRRAA--PRAIERIGVVGGGTMGAGIAVAALDAGFPV 328

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            + E +   L +G   +E    GLV +G++T       L  L G   Y      D+VIEA
Sbjct: 329 TMIERDDASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARLTGGTSYEALAQADVVIEA 388

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + +K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M 
Sbjct: 389 VFEDMAVKKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMK 448

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLE+V   + SA V+     + K +KK+PV  G C GF  NR    Y  +A  ++  G  
Sbjct: 449 LLEVVVPAKVSADVVATAFELAKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGAS 508

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
            +RID AIR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G
Sbjct: 509 PYRIDRAIREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFG 568

Query: 414 KANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           +  G+G Y Y  G++   PDP V  II E R    +     P + T+ EIV   L  ++N
Sbjct: 569 QKTGRGYYLYPDGARVGTPDPEVEAIIAEERAKKGV----SPRAFTDDEIVRRYLAAMIN 624

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E   V+ E I +R  D+D   + G  FP +RGG + +ADAVG   V   ++ ++     F
Sbjct: 625 EGANVVHERIALRPLDVDAVFLHGYGFPRHRGGPMHYADAVGLANVLADIRAFASEDPVF 684

Query: 533 FKPSRFLEERATKG 546
           +KPS  L +   +G
Sbjct: 685 WKPSPLLVDLVARG 698


>gi|83721254|ref|YP_440951.1| fatty oxidation complex subunit alpha [Burkholderia thailandensis
           E264]
 gi|167617743|ref|ZP_02386374.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis Bt4]
 gi|257140395|ref|ZP_05588657.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis E264]
 gi|83655079|gb|ABC39142.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis E264]
          Length = 708

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 177/547 (32%), Positives = 272/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A   P  R+          +
Sbjct: 159 LMLSGRHASAEEALTLGLVDRLAHSDDTLAEGLAYVHELLAAGAPARRTRDAQGLADRAA 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
               +       AKK+   +      +D +   +      G+  E ++F E +      G
Sbjct: 219 AEAALEAARADVAKKSR-GLFSPAKIVDAVAAALALPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P  T  G+ PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAEREAAKSPE-TRRGV-PRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYDALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKSVFAELARACKPGAVLATNTSYLDIDEIAASVERTPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K ++K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELAKKLRKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II E R    +     P + T+ EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARAGAPDPEVEAIIAEARAKKGV----SPRAFTDDEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFASEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|348027575|ref|YP_004870261.1| fatty oxidation complex subunit alpha [Glaciecola nitratireducens
           FR1064]
 gi|347944918|gb|AEP28268.1| fatty oxidation complex, alpha subunit [Glaciecola nitratireducens
           FR1064]
          Length = 702

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 190/548 (34%), Positives = 294/548 (53%), Gaps = 12/548 (2%)

Query: 8   ITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR-SLHRTDKLGSLSEA-REV 65
           I + +   +GLID VV  + LL  +  +A ++  +     + S    +K G   E   E+
Sbjct: 157 IAASKALSIGLIDKVVDGD-LLSGALEFAKEVIEQGATLKKISDLEVEKQGDSPEFFSEL 215

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
               R+   K        Q  +D IE  +      G+  E ++F E +    S  L H+F
Sbjct: 216 FAEWRITLSKRYRGQEAPQRIVDCIEAAVNKPFNEGLKIERELFMECMQSSQSAALRHLF 275

Query: 126 FAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FA+R +SKV  +  D  LK   +++V +IGGG MG GIA   +   I V L E+N E L 
Sbjct: 276 FAERMSSKVNGLPKDTQLK--DIKRVGIIGGGTMGGGIAMNFVNVGIPVTLLEINDEALQ 333

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           +G   I  N    V++GKL+ + A+    M+ G  DY+E  ++D+VIEAV E++ +K+++
Sbjct: 334 RGKDIIAKNYAITVSKGKLSAELADERQGMITGTTDYNELANMDLVIEAVFENLDIKKQV 393

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F +L+  C    ILATNTS  D++++ + TS    +IG HFFSPA+VM LLEIVR E TS
Sbjct: 394 FKKLDAVCKQGAILATNTSYQDVDLIAQATSRPQDVIGLHFFSPANVMKLLEIVRGEHTS 453

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
            QV+   M V K IKKVP +   C GF  NR   PY + ++L +  G     IDS ++ F
Sbjct: 454 DQVLATSMAVAKSIKKVPALSRVCYGFIGNRMLRPYVRESQLCLLEGSTPQAIDSVMQRF 513

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 424
           G+ +GP  + DLAG  +     +              + D L + GR G+  G G Y Y+
Sbjct: 514 GMAMGPLAVSDLAGIDIGYKAREGLSDEQKGDIRTYCIADALYEMGRLGQKTGAGFYQYD 573

Query: 425 KGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIV 483
             ++ + PDP VL +IEE      +    +   + +  I++ + F ++NE  ++LEEGI 
Sbjct: 574 PNTRQRIPDPKVLEVIEEQAEKRGV----ERKDILDHTILQRLTFALINEGFKILEEGIA 629

Query: 484 VRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLEER 542
            R SD+D   V G  FP+YRGG +F+AD +G   VY ++ ++S+ YG  F++P+  L++ 
Sbjct: 630 QRPSDIDVVYVFGYGFPAYRGGPMFYADTIGLETVYKTICEFSKTYGEEFWQPAALLKQL 689

Query: 543 ATKGIPLS 550
             +G  L+
Sbjct: 690 VEEGKTLT 697


>gi|167579665|ref|ZP_02372539.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           thailandensis TXDOH]
          Length = 708

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 177/547 (32%), Positives = 272/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A   P  R+          +
Sbjct: 159 LMLSGRHASAEEALTLGLVDRLAHSDDTLAEGLAYVHELLAAGAPARRTRDAQGLADRAA 218

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
               +       AKK+   +      +D +   +      G+  E ++F E +      G
Sbjct: 219 AEAALEAARADVAKKSR-GLFSPAKIVDAVAAALALPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P  T  G+ PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAEREAAKSPE-TRRGV-PRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYDALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDEIAASVERTPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K ++K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELAKKLRKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II E R    +     P + T+ EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARAGAPDPEVEAIIAEARAKKGV----SPRAFTDDEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP YRGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRYRGGPMHYADTVGLANVLADIRAFASEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|393767275|ref|ZP_10355824.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
           GXF4]
 gi|392727176|gb|EIZ84492.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Methylobacterium sp.
           GXF4]
          Length = 690

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 179/551 (32%), Positives = 289/551 (52%), Gaps = 23/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-PWIRSLHRTDKLGSL 59
           MML  + +++E   KLG++DAVV  + L+  +R+ AL++A     P +R   R D L   
Sbjct: 149 MMLTGEPVSAEIAAKLGIVDAVVLGD-LVPAARIRALELADSGALPRVRD--RVDTL--T 203

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGY-SGVLKEAKVFKELVMLDTS 118
            EAR+  +     A K  P      A    +  G+    + + V  E   F+ LV    S
Sbjct: 204 PEARQAFEAKAEAAVKRDPEATNVHALARAVRAGLDPDAFDAAVAVERAEFRTLVEDPRS 263

Query: 119 RGLVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L + FFA+R  ++VP ++ D   +P  V   AVIG G MG GIA       I V + E
Sbjct: 264 KALRYAFFAEREAARVPGLSKDTPRRP--VETAAVIGAGTMGGGIAMCFANAGIPVTVIE 321

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
             +  L +G+  ++    G   RG +T+ + +  +  + G +      + D+VIEA  E 
Sbjct: 322 TEAGALERGLDRVKGLYAGSAKRGSITEAQRDERIGRITGAIGLENAGEADIVIEAAFED 381

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K++IFS+L+    P  ILATNTS +D++ +   T     ++G HFFSPA+VM L+E+
Sbjct: 382 MAVKREIFSKLDGIAKPGAILATNTSYLDVDAIAAVTGRPQDVLGLHFFSPANVMRLVEV 441

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR  +T+  V+   + + K + K+PV VG C GF  NR     S++A  L+  G     +
Sbjct: 442 VRASKTAPDVLATALHLAKRLNKLPVTVGVCFGFVGNRILERRSRAAERLLLEGALPHAV 501

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D+A+  FG  +GPF + DLAG  +   + K+F         ++P+ D L + GR G+  G
Sbjct: 502 DAAVTGFGFRMGPFAMSDLAGLDIGWRSRKDF-------GGRAPVADALAEMGRFGQKTG 554

Query: 418 KGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           +G + Y  G++    DP V  +IE+      I       S T  EI+  +++P+VNE  R
Sbjct: 555 RGFFVYSDGARTGTRDPKVEALIEKTAAEHGI----ARRSFTPDEIIARLMYPMVNEGAR 610

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK-P 535
           +LEEGI  R  D+D   + G ++P++RGG + WAD VG  +V  +L ++++  G+  + P
Sbjct: 611 ILEEGIAARPGDIDTIWINGYNWPAWRGGPMHWADTVGLKHVAEALTRFARETGDDSQEP 670

Query: 536 SRFLEERATKG 546
           +  L + A  G
Sbjct: 671 APLLRKLAESG 681


>gi|427404633|ref|ZP_18895373.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
 gi|425716804|gb|EKU79773.1| hypothetical protein HMPREF9710_04969 [Massilia timonae CCUG 45783]
          Length = 696

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 190/552 (34%), Positives = 287/552 (51%), Gaps = 18/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRK-PWIRSLHRTDKLGS 58
           M+L    + SE+     L D V  +  ELL  +  +A  IA  R  P +R     D++  
Sbjct: 152 MILGGIPMLSEKLAGTPLFDEVFQAGAELLPAAIAYAERIADLRPLPKVR-----DRVVE 206

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDT 117
             +A   L  AR Q    A   P  +AC++ +   +    +   L+ E + F +L     
Sbjct: 207 HPDAAGFLASARAQVDAAAGPFPAPRACVEAVAASVTADSFEDGLRFERERFIQLTTTSE 266

Query: 118 SRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
           S+ L H FFA+RA  KVP+V  D  L  R +   AV+G G MG GIA       I V L 
Sbjct: 267 SKALRHAFFAERAAGKVPDVPADTPL--RSIASAAVVGAGTMGRGIAMNFANAGIPVTLL 324

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           E   + L +G+  +       V++GKL  ++    + ++ G L Y      D+V+EAV E
Sbjct: 325 ETKQDALDQGLAAMRKLYESGVSKGKLKPEQLEQRMALVTGTLSYDAIAQADIVVEAVFE 384

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + +K+ +F EL+K   P  ILATNTST+D+N +   T     +IG HFFSPAHVM LLE
Sbjct: 385 DIGVKELVFRELDKVMKPGAILATNTSTLDVNRIAAFTRRPQDVIGLHFFSPAHVMKLLE 444

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           IVR  RT   V+   + + K ++K+ VV G C GF  NR    Y + A  L+  G    +
Sbjct: 445 IVRGARTGKDVLATALALSKKLRKIGVVSGVCDGFIGNRMLEQYLRQAVFLLEEGALPEQ 504

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +D AI +FG  +GPF++ DLAG  +     K      P  ++ S L DLL + GR G+  
Sbjct: 505 VDRAIEAFGFAMGPFRMSDLAGNDIGWHIRKRRALESPGFTY-SKLPDLLCEQGRFGQKT 563

Query: 417 GKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G G Y Y  G  K  P  +V  ++   R  ++I  G    ++ ++EIVE +++ +VNE  
Sbjct: 564 GAGWYDYRAGERKALPSEAVNDMV--VRHSADI--GVSRRAIADEEIVERLVYALVNEGA 619

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYGNFFK 534
           R++EEGI +RASD+D   + G  FP +RGG + +AD+VG   V  +++ +++   G  ++
Sbjct: 620 RIIEEGIALRASDVDMVYLSGYGFPLHRGGPMLYADSVGLPKVLEAVEGFARGRQGEAWQ 679

Query: 535 PSRFLEERATKG 546
           P+  L   A+ G
Sbjct: 680 PAPLLARLASLG 691


>gi|121611857|ref|YP_999664.1| 3-hydroxyacyl-CoA dehydrogenase [Verminephrobacter eiseniae EF01-2]
 gi|121556497|gb|ABM60646.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Verminephrobacter eiseniae EF01-2]
          Length = 703

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 172/551 (31%), Positives = 279/551 (50%), Gaps = 16/551 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +M     + + +   +GLID +   ++L   +   A  + A ++P  +   + DK+ +  
Sbjct: 155 LMTSGAQVEAADALGIGLIDELAPEDDLQGAAVALAKRVVAEKRPLRKLRDQNDKVEAAR 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E++   R    K        +  +  +E  +      G+  E K+F EL+  + S  
Sbjct: 215 GNPELVAAFRKANAKKFRGFAAPEKIVQCVEAAVNLPFDEGLKLERKLFVELMQGEQSAA 274

Query: 121 LVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             H FFA R   KVP +  D  + P  V+ V VIG G MG+GIA   +   I V + E  
Sbjct: 275 QRHYFFASRQAWKVPGLKKDAAIVP--VQTVGVIGAGTMGAGIAMNFLNVGIPVHIVETR 332

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L +G+ TI  N      +G+L        + ++ G L+  +    ++VIEAV E + 
Sbjct: 333 QEALDRGLATIRTNYGNTAKKGRLEVGAIEERMALVTGSLELQDLSGCELVIEAVFEDME 392

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F  L++      ILA+NTS +DLN +   T+  + +IG HFFSPA+VM LLEIVR
Sbjct: 393 VKKHLFGRLDRVAKAGAILASNTSALDLNQIASATARPESVIGLHFFSPANVMKLLEIVR 452

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            ++TS  VI   M + + I KV V+VG C GF  NR      + A  L+  G   + +D 
Sbjct: 453 GDQTSDSVIATSMQLARKIGKVAVLVGVCPGFVGNRILGQRQREANQLIFEGATPWAVDR 512

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG P+GPF + DLAG  +       ++K   D+S  + L ++L + GR G+  G G
Sbjct: 513 VLYDFGFPMGPFAMSDLAGLDLG------WNK---DKSTGATLREVLCEMGRRGQKTGAG 563

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y+     +P   V  +I +  R   I     P  V++ EI+E  ++P++NE  ++L+
Sbjct: 564 FYDYDGQRTAQPSQLVEGVIRDFARKKGI----APRQVSDDEILERCIYPMINEGAKILQ 619

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG+ VRASD+D   + G  +P YRGG + + + +G   V + ++++   +G  FKP++ L
Sbjct: 620 EGVAVRASDIDVVWINGYGWPVYRGGPMHYGERIGLPKVLSRMREFEARHGPQFKPAKLL 679

Query: 540 EERATKGIPLS 550
           EE    G   S
Sbjct: 680 EELVASGRKFS 690


>gi|409404906|ref|ZP_11253379.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
 gi|386435673|gb|EIJ48497.1| 3-hydroxyacyl-CoA dehydrogenase [Herbaspirillum sp. GW103]
          Length = 713

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 177/559 (31%), Positives = 279/559 (49%), Gaps = 31/559 (5%)

Query: 2   MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS-LS 60
           ML  + + ++E   LGL+D +   E           D A  R   +R L     +G+ + 
Sbjct: 162 MLSGRHLGAKEALGLGLVDHLAEGE-----------DAAQARAAGLRELQTLLDMGAPVR 210

Query: 61  EARE------------VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 108
            +R+             +  AR +  K +  +      +D +E         G+  E + 
Sbjct: 211 RSRDGSALADSAAAQAAISAARAETGKKSRGLFSPHKIIDAVEAATTLPFDQGLALERQF 270

Query: 109 FKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 168
           F + +      GL+H FFA+R   K P   +   +PR + ++ V+GGG MG+GIA A + 
Sbjct: 271 FLQCLDSPQRAGLIHAFFAEREVQKAPETRNA--QPRPIARIGVVGGGTMGAGIAVAVLD 328

Query: 169 NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 228
             + V + E + E L +G   +E      V +G+LTQ+  +  L  L G   Y +    D
Sbjct: 329 AGLPVTMIERDDEALARGRGHVEKVYDAQVAKGRLTQEARDAVLARLHGSTRYEDLSAAD 388

Query: 229 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 288
           +VIEAV E + +KQ +F+EL++ C P  +LATNTS +D++ +    S    +IG HFFSP
Sbjct: 389 VVIEAVFEDLNVKQAVFAELDRVCKPGAVLATNTSYLDIDAIAASISRPADVIGLHFFSP 448

Query: 289 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 348
           A+VM LLEIV   + +A V+     + K ++KVPV  G C GF  NR    Y Q+A  L+
Sbjct: 449 ANVMKLLEIVVPRQVAADVVATAFELAKRLRKVPVRAGVCDGFIGNRILAVYRQAADALM 508

Query: 349 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLK 408
             G   + ID+A+R FG  +GP+Q++DLAG  +  AT K        R+    + D L +
Sbjct: 509 EDGASPYEIDAAVRDFGFAMGPYQVVDLAGGDIGWATRKRRAATRDPRARYVHIADRLCE 568

Query: 409 SGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
            G  G+ +G+G Y Y  G +   PDP VL +I+E R  + I     P S ++++I    L
Sbjct: 569 RGWFGQKSGRGFYRYPDGPRSGAPDPEVLALIDEERARAGIT----PRSFSKEDIQRRYL 624

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
             ++NE   V+ + I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++ 
Sbjct: 625 AAMINEGANVVHQRIALRPLDVDVTFLYGYGFPRHRGGPMKYADMVGLPNVLADIRTFAA 684

Query: 528 LYGNFFKPSRFLEERATKG 546
               F+ PS  L E   +G
Sbjct: 685 EDPLFWTPSPLLVELVERG 703


>gi|302341530|ref|YP_003806059.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
           baarsii DSM 2075]
 gi|301638143|gb|ADK83465.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Desulfarculus
           baarsii DSM 2075]
          Length = 709

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 175/549 (31%), Positives = 283/549 (51%), Gaps = 10/549 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRT-DKLGS 58
           MM   K I +E  +  GL+D V   ++LLK +   A    AR     +R+   T  +L S
Sbjct: 162 MMTTGKPIKAEVAFVRGLVDEVCAPDKLLKKAFGAAKMFKARMYNQKVRTARNTFYRLPS 221

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            +E    +   R      +         LD +++G+     + +  EA  F +LV    +
Sbjct: 222 FNEKLHFMNYIRAMVGAQSKGYIAPGKILDCLDKGLSADFEADLKVEANGFADLVTSAVA 281

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   R+  ++P + D  LKP    KVA +GGG+MG GI    + N    VL ++
Sbjct: 282 KNLIGMFLNTRSAGRLPRIKD--LKPAKPMKVAQLGGGVMGCGIVHLLLANGFECVLWDI 339

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIES 237
           N   L KG+++++     ++ + K+     +  L + L       +  DVD+VIEAV+E+
Sbjct: 340 NDAALAKGVESVKKTFAFMIKKKKMKPADLDKLLAEKLTTTTKLEDLGDVDLVIEAVLEN 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +KQ+I+  LEK C P  I  TNTS + +  +        R+IG HFF+PA  M LLEI
Sbjct: 400 MKVKQEIWLTLEKTCRPDVIFGTNTSALPITEMASVLKDPGRMIGLHFFNPAERMQLLEI 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  ++TS Q +   +  G+ IKKVP+VV +  GF V+R        +  LV+ GV    I
Sbjct: 460 ICAQQTSDQTLATSVDFGRRIKKVPIVVNDGPGFYVSRQLGGLMGGSVFLVADGVSGEAI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           + A+ +FG+P+GP  L DL G  +    ++ F +   DR    PL + +   G  G+  G
Sbjct: 520 EKAMMNFGMPMGPATLADLTGIDINYHVNQTFARELGDRYTVHPLTEAIYNLGDYGRKTG 579

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           +G   Y  G KP P+P +  ++ +  + +N+ P   P    E+EI++ +L   +NE+  +
Sbjct: 580 RGYMDYTSG-KPVPNPRLQQVVADYLKANNVAPKDMP----EQEIIDAMLGLAINEAALM 634

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           +E+GI  R +D+D A + G  FP YRGGI+ +AD  G   VY +L K    YG  F P++
Sbjct: 635 IEQGICDRPADMDLAMIYGTGFPPYRGGILRYADTWGLKNVYETLVKLEGRYGKRFAPAK 694

Query: 538 FLEERATKG 546
            +++ A KG
Sbjct: 695 LIKDMAEKG 703


>gi|114321260|ref|YP_742943.1| short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227654|gb|ABI57453.1| 3-hydroxyacyl-CoA dehydrogenase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 714

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 177/546 (32%), Positives = 273/546 (50%), Gaps = 17/546 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK-----PWIRSLHRTDK 55
           +ML  + + + +  K GL+D +V    LL  +R    ++A  R+     P    L   + 
Sbjct: 179 LMLTGRQLRARQARKRGLVDDLVAPPILLDAARKRIDELAEPRRHRPKRPLTTRLLENNP 238

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
           LG     R+     R    KT  N P     +D +  G   G  +G+  E + F EL M 
Sbjct: 239 LGRRLVYRQS---ERTVQAKTHGNYPAPPRIIDAVRAGRERGRQAGLETERRHFGELAMT 295

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVV 174
             +R L+ ++FA  A  K  + TD G++PR VR+V V+G GLMG+GIA          V 
Sbjct: 296 PEARALMALYFATTALKK-DSGTDAGVEPRPVRRVGVLGAGLMGAGIAYVTSAKAGTPVR 354

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           LK++  E L  G++ I+  +R    RG LT  +A      +   LDY  F  +D+VIEAV
Sbjct: 355 LKDIALEGLNNGMRHIDGEIRARHKRGALTDFEATRQRTRVTPTLDYRGFGALDVVIEAV 414

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E   LK ++ +++E   P H I A+NTS++ ++ +       +R+IG H+FSP   MPL
Sbjct: 415 FEDPELKHRMLADVEAHGPEHVIFASNTSSLPISEIATGAQRPERVIGMHYFSPVEKMPL 474

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           LE++ T+RT  +VI   + +G+   K  +VV +  GF VNR   PY   A  L+  GV +
Sbjct: 475 LEVIATDRTDPEVIATTVALGRTQGKTVIVVRDGAGFYVNRILAPYLNEACRLLQEGVAI 534

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID  +  FG P+GPF LLD  G  V+   +    +AF +R     +   +L  GR G+
Sbjct: 535 DHIDRTLVRFGFPVGPFALLDEVGLDVSEKVAPILHRAFGERMTPVDVGGRMLADGRKGR 594

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG Y Y++    K      P+ E   RL  + PG     +  + I++  + P++NE+
Sbjct: 595 KSGKGFYRYDR----KRGKGGRPVDEGVYRLLGLAPG---RDMAPEAIIDRTVLPMINEA 647

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R  +EGI+    D D  +V G+ FP +RGG   +    GA  V   L+  +  +G  F 
Sbjct: 648 VRCRDEGIIRCERDGDIGAVFGIGFPPFRGGPFHYLRQQGAAGVTERLQALAAEHGPRFA 707

Query: 535 PSRFLE 540
           P+  L+
Sbjct: 708 PAPSLQ 713


>gi|94497668|ref|ZP_01304236.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
 gi|94422885|gb|EAT07918.1| fatty oxidation complex, alpha subunit [Sphingomonas sp. SKA58]
          Length = 689

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 178/545 (32%), Positives = 269/545 (49%), Gaps = 23/545 (4%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAR 63
           + I + E   LGL+D VV    L   +  +A  I A    KP +R   R D L +  +  
Sbjct: 157 RQIKAAEALSLGLVDTVVEDAALRHNALAFAHRIVAHGSDKPRVRD--RADALSADRDRP 214

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+         +         A ++ ++  +      G+ KE  +F+ L+    S    H
Sbjct: 215 ELFTAFAAANARRFKGFVAPAAIIEAVKAAVTLPFEQGLAKETDLFERLIASPESAAQRH 274

Query: 124 VFFAQRATSKVPNVTDIGLKPRGV--RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           VFFA+R  ++VP   DIG     +  R V VIG G MG GI    +   I V L E + E
Sbjct: 275 VFFAEREAARVP---DIGPDTVAIDIRSVGVIGAGTMGGGITMNFLNAGIPVTLLETSQE 331

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +GI TI  N      +G++T  +    + ++   LD S   D D++IEAV ES+ +K
Sbjct: 332 ALDRGIATIRRNYEATAVKGRMTAAQVEQRMDLIAPSLDLSSLTDADLIIEAVYESMDVK 391

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
             IF+ L++      ILA+NTS +DLN +   TS  + ++G HFFSPA+VM LLE+VR  
Sbjct: 392 TGIFASLDRIARQGTILASNTSFLDLNCIAAATSRPEWVVGLHFFSPANVMRLLEVVRGA 451

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
            TS  V+   M + K I KV V+ G C GF  NR   P    A  ++     +  ID  +
Sbjct: 452 ETSKAVVATAMRLAKRIGKVAVLSGVCDGFIANRLMAPRGAQAEAMMLEDTPIAEIDRVL 511

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
             +G  +G FQ++DL G  V    + E       R+    LV +    GR G+  G G Y
Sbjct: 512 VDYGFAMGHFQMMDLVGLDVIGRNATE-------RTVMGDLVAV----GRLGQKRGAGYY 560

Query: 422 TYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
            Y+   + +       +I+E      I       +  ++ ++  +L+PVVNE  ++LEEG
Sbjct: 561 DYDDKRRSRFSDVTGKLIKEVAAARGI---ASNRTSGDEALLGRLLYPVVNEGAKILEEG 617

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 541
           I +RASD+D A+VLG ++P YRGG +FWAD VG + +   ++    ++G  F+P+  L  
Sbjct: 618 IALRASDIDIAAVLGYNWPVYRGGPLFWADQVGLDRIVADMRALEVVHGETFRPAPLLVR 677

Query: 542 RATKG 546
            A  G
Sbjct: 678 LAEAG 682


>gi|226193718|ref|ZP_03789321.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei Pakistan 9]
 gi|225934296|gb|EEH30280.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei Pakistan 9]
          Length = 708

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 273/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A + +   V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDSGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|347735378|ref|ZP_08868262.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Azospirillum amazonense Y2]
 gi|346921425|gb|EGY02151.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Azospirillum amazonense Y2]
          Length = 514

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 163/474 (34%), Positives = 259/474 (54%), Gaps = 4/474 (0%)

Query: 80  MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 139
           +P   AC++ +   +      G+ +E  +F+ELV+   S+ L + FFA+R  +++  ++ 
Sbjct: 43  LPAPLACIEAVRAAVELPFSQGLQREFNLFRELVVTPESKALQYAFFAERRAARIDGLSP 102

Query: 140 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 199
             ++PR + +VAVIG G MG+GIAT  +   + V+L + +   + KG+  I       V 
Sbjct: 103 -DVQPRAIERVAVIGAGTMGAGIATVAVNAGLEVILLDRDETGVQKGLAGITKGYDAAVA 161

Query: 200 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 259
           +G++   + +  L  L    D +    VD+VIEA  E + +KQ IF  L+K C P  ILA
Sbjct: 162 KGRMDGAERDRRLGRLHTATDLAACAAVDLVIEAAFEDMGVKQDIFRTLDKVCGPDTILA 221

Query: 260 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 319
           +NTST+DL+ +   TS    ++G HFFSPA VM LLE+VR   T+ +V+   M + + + 
Sbjct: 222 SNTSTLDLDAIAAVTSRPQSVVGLHFFSPAPVMRLLEVVRGAETAPEVLATAMALSRKLG 281

Query: 320 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 379
           KV VV G C GF  NR    Y + A  LV  GV  +++D A+  +G+ +GPF ++DLAG 
Sbjct: 282 KVGVVAGVCNGFIGNRMVEEYLRQAYFLVDEGVLPWQVDGALERWGMAMGPFAMMDLAGN 341

Query: 380 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPI 438
            +  A  +   KA  D    S   D +   GR G+  GKG Y Y+  ++ +  DP V  +
Sbjct: 342 DIGRAI-RAGRKALGDERPYSTFPDKICALGRFGQKTGKGYYQYDPATRARETDPEVDAL 400

Query: 439 IEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 498
            +   +      G  P  + ++EIV   L  + NE   +L EGI  RASD+D   + G  
Sbjct: 401 AQAHAKEVAQEFGLSPRVIGDEEIVARCLLALANEGAALLGEGIAQRASDIDVVYLNGYG 460

Query: 499 FPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GNFFKPSRFLEERATKGIPLSA 551
           FP+++GG +F AD++G   V   ++ + + Y G F+KP+  L E+A+ G  L+A
Sbjct: 461 FPAHKGGPMFHADSLGLENVLRLMEGFLEGYQGQFWKPAPLLWEKASAGGRLTA 514


>gi|197106678|ref|YP_002132055.1| fatty oxidation complex subunit alpha [Phenylobacterium zucineum
           HLK1]
 gi|196480098|gb|ACG79626.1| fatty oxidation complex, alpha subunit [Phenylobacterium zucineum
           HLK1]
          Length = 691

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/551 (31%), Positives = 277/551 (50%), Gaps = 18/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   +   ++E   +GL+D +V   +L   +  +A  + A  KP ++      KL    
Sbjct: 154 MVTSGRHAPAKEALAMGLVDELVEEGKLKDGAVAFARKLVAENKPLVKVRENNAKLEEAK 213

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSR 119
              E+    R +  +        +  +  IE  +    +  G+  E K+F EL+    S 
Sbjct: 214 GKPEIFAEFRKKNARKFRGFLAPEYNIRCIEAAVNSNSFEEGLAVERKLFMELMTGPQSA 273

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
              + FFA+R   K+P+V D     R V+KV V+G G MG GIA   +   I V + E+ 
Sbjct: 274 AQRYYFFAERTAQKIPDVPD-DTPTRPVKKVGVLGAGTMGGGIAMNFLNVGIPVTIVELK 332

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+ TI  N     +RG + + +    + +L G L   +F D D++IEAV E + 
Sbjct: 333 QDALDRGLATIRKNYE--RSRGAVPE-QTEQRMSLLTGSLSMDDFADCDLIIEAVFERMD 389

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F++L+    P  ILATNTS ++++ +   T     +IG HFFSPA+VM LLE++R
Sbjct: 390 IKKDVFAKLDGIAKPGAILATNTSYLNIDEIASATKRPQDVIGLHFFSPANVMKLLEVIR 449

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+  VI   M + K I KV V+ G C GF  NR      + A  LV  G   + ID 
Sbjct: 450 ADHTAKDVIATSMKLAKQIGKVAVLAGVCPGFIGNRMLSQRQREANKLVLEGAMPWDIDR 509

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +  FG P+GPF + DLAG  +     KE  K          L D+L +  R G+  G G
Sbjct: 510 VLYDFGFPMGPFAMSDLAGLDIGWV--KENSKG-------ETLRDVLCEMDRRGQKTGAG 560

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++    KP P    II++ R    I       +++++EI+E  ++P++NE  ++LE
Sbjct: 561 FYDYDENRTAKPSPVTEKIIQDFRAKKGI----NARTISDEEILERCIYPMINEGAKILE 616

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG  +R SD+D   V G  +P YRGG + + D VG + V   +K++    G+ FKP+  L
Sbjct: 617 EGKAIRPSDIDVVWVNGYGWPVYRGGPMHYGDFVGPDKVLAKMKEFQGAMGDDFKPAALL 676

Query: 540 EERATKGIPLS 550
           E+   +G   S
Sbjct: 677 EKLVAEGKKFS 687


>gi|343514105|ref|ZP_08751187.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           sp. N418]
 gi|342800771|gb|EGU36282.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           sp. N418]
          Length = 704

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/553 (31%), Positives = 292/553 (52%), Gaps = 22/553 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL+V++ +   +  + K   +   +   +    
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVAPTILLEVAKQF---VEGKDKAKHKVSTKEKLMAQTG 224

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P  +A L+VI  G+ HG   G+  EA+ F ELVM + S
Sbjct: 225 FGRKVIFEQAAKKTQQKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSNES 284

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++        +P  V+++AV+GGGLMG+GI+   +    + V +K+
Sbjct: 285 KALRSIFFA---TTEMKKEHGSDAEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRIKD 341

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +            R  L++ +  + ++ L G +D+  F   D+VIEAV E 
Sbjct: 342 VSNDGVLNALNYNFKLFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVFED 401

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E+   P  I ATNTS++ ++ + E+ +  + +IG H+FSP   MPL+E+
Sbjct: 402 LALKQQMVADIEQNAKPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + TSAQ I  ++ + +   K P+VV +C GF VNR   PY   A  ++  G  + ++
Sbjct: 462 IPHQTTSAQTISTVVELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIEQL 521

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKAN 416
           D A+   G P+GP  LLD  G  + A            R FQ P V D LLK GR G+ +
Sbjct: 522 DGALLDAGFPVGPITLLDEVGVDIGAKIMPILVNELGPR-FQGPAVFDTLLKDGRKGRKS 580

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG YTY KG   + D SV        +L N+ P  K   +  +E+    L P++NE+ R
Sbjct: 581 GKGFYTY-KGKDKQVDKSVY-------KLLNLTPESK---MASQEMAMRCLLPMLNEAVR 629

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + +  YG  F P 
Sbjct: 630 CLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGIVKLVEIMNEHAAKYGERFAPC 689

Query: 537 RFLEERATKGIPL 549
             L  RA+   P 
Sbjct: 690 DGLLTRASLNAPF 702


>gi|392410492|ref|YP_006447099.1| 3-hydroxyacyl-CoA dehydrogenase [Desulfomonile tiedjei DSM 6799]
 gi|390623628|gb|AFM24835.1| 3-hydroxyacyl-CoA dehydrogenase [Desulfomonile tiedjei DSM 6799]
          Length = 709

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 167/549 (30%), Positives = 287/549 (52%), Gaps = 10/549 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW--IRSLHRTDKLGS 58
           MM +   I S      GLID V   E  L+V+   A ++A         R+ +R ++L S
Sbjct: 162 MMTVGDPIDSRTALSRGLIDEVTEPEHFLRVALSAATNLAEGTISLESSRTRNRNNRLPS 221

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            +E + V   AR+QA+K A         ++ +E G+     + + +E ++F E  + D +
Sbjct: 222 SAELKAVTSAARVQAEKKAKGYLAPFKVIEALENGLSPDIEADIRREGELFAECALSDVA 281

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   RA  ++  ++ +  KP   ++VAV+GGG+MGSGI    +      VL ++
Sbjct: 282 KNLIGIFLNTRAAGRLTRISRV--KPADTKQVAVLGGGVMGSGIVNLLLRRGFDAVLWDI 339

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLKGVLDYSEFKDVDMVIEAVIES 237
             E + +G+ ++       + R K+   +    L K L+      + ++ D++IEAVIE+
Sbjct: 340 TEEAVDRGVASVRKTFEHAIKRKKMLPTELETLLDKRLRVTTSLEDMQEADLIIEAVIEN 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +KQ I+ +LE+ C    + ATNTS + +  +      Q R IG HFF+PAH M LLEI
Sbjct: 400 MDIKQSIWKQLEEICKTEAVFATNTSALPIAEIASILKDQGRAIGLHFFNPAHQMQLLEI 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           + T++TS   +   +   + I K+PV+V +  GF V+R        A  L++ GVD  RI
Sbjct: 460 ICTQKTSDLTLATSVAFARAIGKIPVIVNDSPGFYVSRQLGGLLGGAVYLMADGVDWSRI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           ++A++ FG+P+GP +L DL G  +     K F++    R    PL++ + ++G  G+  G
Sbjct: 520 ENAMKDFGMPMGPAELADLTGIDINYHVYKTFEQRLGPRYKMHPLMESIYQTGCYGRKTG 579

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
            G   Y  G +  P+  VL +I+     +++     P +V+++EI++ +L   +NE   +
Sbjct: 580 MGYMDY-GGDELVPNKKVLDVIQNYLSDNHV----SPKNVSDQEIIDTMLALAINEGALI 634

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           +EEG+      +D A + G  FP +RGGI  +AD  G   VY +L K  + +G  F+PS 
Sbjct: 635 IEEGVCDEPQHMDLAMIYGTGFPPFRGGIFRYADKWGIANVYETLIKLERQFGPRFEPSN 694

Query: 538 FLEERATKG 546
            L++    G
Sbjct: 695 LLKKMVEAG 703


>gi|430744232|ref|YP_007203361.1| 3-hydroxyacyl-CoA dehydrogenase [Singulisphaera acidiphila DSM
           18658]
 gi|430015952|gb|AGA27666.1| 3-hydroxyacyl-CoA dehydrogenase [Singulisphaera acidiphila DSM
           18658]
          Length = 718

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 177/545 (32%), Positives = 269/545 (49%), Gaps = 13/545 (2%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + +++++  +LG+I   V ++ L+   R   +D       W R   +  +   LS  +  
Sbjct: 171 QPLSAKKAAELGVIFDAVPADRLVDEGRRL-IDYFQESGEWKRRREQARQPLGLSPDQFT 229

Query: 66  LKLARLQA---KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 122
              A  +     KT    P   A L  I+EG       G+  E +V  EL     +  L+
Sbjct: 230 FAFATAEGLLQSKTKGQYPAPLAALKAIKEGCNLPLEQGLEAEKRVALELFGSPIAANLI 289

Query: 123 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
            +FF +   +  P V    +KP  V +V V+G GLMG+GIA AH  + I   + +V+   
Sbjct: 290 GIFFMKNRLAHDPGVDRTDVKPGQVDRVGVVGSGLMGAGIAAAHARSGIPTAMVDVDDAR 349

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L  GIK  E  V   +  G+       + L  L     +    D D+VIEA+ E+   K 
Sbjct: 350 LAAGIKQAEEVVLSRIKIGRAAPMDLADMLAELSTSTGHGILADRDVVIEAITENEEAKV 409

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
             + +L        ILA+NTSTI +  +        R +G HFFSP   M L+E++R E 
Sbjct: 410 ATYKQLAGVLKEGTILASNTSTISITRMAAAAPDPSRFVGMHFFSPVDRMELVEVIRGEA 469

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           TS + +  ++ + K I+K P+VV +C GF VNR  FPY   A LL+  GV +  ID A  
Sbjct: 470 TSDETVATIVALAKRIRKTPIVVRDCAGFLVNRVLFPYMNEALLLLQEGVPMDAIDKAAT 529

Query: 363 SFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 422
           +FG+P+GP  L D+ G   +    K    A+PDR+    L+  L+K+GR GK  G G   
Sbjct: 530 TFGMPVGPIALHDMVGLDTSFFAGKVLAAAYPDRATMPALLKDLVKAGRLGKKTGAGFRA 589

Query: 423 Y-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
           +  K SKP  DP+  PI+E  R        G   ++   EI + +  P++ E+ RVLEEG
Sbjct: 590 HGGKSSKPAADPAFAPILEAHRT-------GSESTLNAAEITDRLFLPMLLEATRVLEEG 642

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 541
           IV   +D+D   +LG+ FP +RGGI+ W DA GA  +   L++++ L G  ++P+  L  
Sbjct: 643 IVREPADVDMGLILGIGFPPFRGGILRWCDAEGAGKIVDRLERFATL-GKRYEPTETLTR 701

Query: 542 RATKG 546
            A  G
Sbjct: 702 HAQTG 706


>gi|296533743|ref|ZP_06896290.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
 gi|296265919|gb|EFH11997.1| Dodecenoyl-CoA isomerase [Roseomonas cervicalis ATCC 49957]
          Length = 698

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 180/548 (32%), Positives = 279/548 (50%), Gaps = 17/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+     + +E+   LGL DA+V  + L           AA   P + +  RTD+L +  
Sbjct: 152 MIASGDPVPAEKAVALGLADALVEGDLLAAAKAKVKALAAAPLPPRLNT--RTDRLDAPG 209

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            ARE  + A     K A   PQ  A +  +          G+ KE   F  L     S+ 
Sbjct: 210 -AREEFEQAATALAKRAREEPQVAAIIQSVRNAFELPLEQGLAKERDFFVALRDDPRSKA 268

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L HVFFA+R  +++P +    +KPR V + AV+GGG MG+GIA +     I V L E ++
Sbjct: 269 LRHVFFAEREAARIPGLPRE-VKPRAVNRAAVLGGGTMGTGIAMSFANAGIPVRLIETDA 327

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L + +K +       V RG L ++     L +++G +        D+V+EAV E + L
Sbjct: 328 AALERALKRVADTYAVSVKRGSLAEEARAKRLALIEGAVGLENAAGTDLVVEAVFEELEL 387

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K++IF++L +   P  +LA+NTS +D+N +G  +     ++G HFFSPA+VM LLE+VR 
Sbjct: 388 KKEIFAKLGQITAPGTVLASNTSYLDINAMGAASGRPGDVLGMHFFSPANVMKLLEVVRA 447

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E T+   +   M VG+ + KVPVVVG C GF  NR     ++    L+  G    ++D A
Sbjct: 448 EATAPDALATAMEVGRKLAKVPVVVGVCHGFVGNRMLAQRTRQVEALLQEGATPAQLDKA 507

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FG  +GP  + DLAG  +     K           ++P+ D L ++GR G+  GKG 
Sbjct: 508 LTDFGFRMGPCAMSDLAGLDIGWRIRKAT-------GAKAPVADALCEAGRLGQKTGKGY 560

Query: 421 YTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G++    DP    IIE       I       ++ + EI+E ++FP++NE  R+LE
Sbjct: 561 YAYPEGARAGVEDPEAQAIIEGISAQLGIT----RRAIGQDEILERLVFPMINEGARILE 616

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRF 538
           EGI  R  D+D   + G ++P++RGG +  ADAVG  +V   L  +++  G +  +P+  
Sbjct: 617 EGIAARPGDIDIVWLYGYNWPAWRGGPMHHADAVGLAHVAQRLAHYAEATGDDSLRPAPL 676

Query: 539 LEERATKG 546
           L   A  G
Sbjct: 677 LARLAESG 684


>gi|338983485|ref|ZP_08632674.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
 gi|338207592|gb|EGO95540.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Acidiphilium sp. PM]
          Length = 698

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 188/547 (34%), Positives = 276/547 (50%), Gaps = 26/547 (4%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAR 63
           K I ++     GLIDA+V+           A+D A    P   +R   R+DK+ +     
Sbjct: 158 KMIGAKAALADGLIDAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADP 211

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
              + A  +A K    +    AC++ +          G   E + F  LV+ D SR   H
Sbjct: 212 SAFEAAAAEATKRLKGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           VFFA+R   K+P    IG + +G +  +  VIGGG MG GIA       I V + E +  
Sbjct: 272 VFFAEREAQKIPG---IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEA 328

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +G+  +       V RG L        + M  G  D+    + D+VIEAV E + LK
Sbjct: 329 ALARGLDRVRGTYDVSVQRGALPAGTTEKRMAMFSGSTDWGVIAEADIVIEAVFEELGLK 388

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           +++F+ L+    P  +LATNTST+D++ +   T     ++G HFFSPA+VM LLEIVR +
Sbjct: 389 KEVFARLDGIARPGALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGK 448

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
            +SAQ I   + VGK + KVPVVVGNC GF  NR     +     L+  G    ++D+ +
Sbjct: 449 ESSAQSIATAIAVGKTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVV 508

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
           ++FG P+GPF + DLAG  V     K        R   +P+ D L + GR G+  G+G Y
Sbjct: 509 KAFGFPMGPFAMGDLAGLDVGWRIRKH-------RGATAPVSDALCEMGRFGQKTGRGYY 561

Query: 422 TYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
            YE GS+ P PDP V  +I E         G    +++++EI+E + +P++NE+ R+LEE
Sbjct: 562 IYENGSRVPTPDPEVEALISE----KAAALGVTRRAISDQEILERMTYPMINEAARILEE 617

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 539
           GI +R SD+D   V G  +P +RGG  F AD VG   +   L+ ++   G+    P   L
Sbjct: 618 GIAIRPSDVDVVWVYGYGWPVWRGGPCFHADLVGLKEIAARLEHYATAVGDETLAPCALL 677

Query: 540 EERATKG 546
              A  G
Sbjct: 678 RRLADAG 684


>gi|326925661|ref|XP_003209029.1| PREDICTED: peroxisomal bifunctional enzyme-like [Meleagris
           gallopavo]
          Length = 726

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 200/570 (35%), Positives = 290/570 (50%), Gaps = 42/570 (7%)

Query: 6   KSITSEEGWKLGLIDAVV---TSEELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSE 61
           + I++ E  KLGL+D VV   T E  ++++ RL    +  RR     SL    KL ++  
Sbjct: 156 RHISASEALKLGLVDEVVEENTVEAAIRLANRLIGQPLGHRR----LSLKPVPKLPNMEA 211

Query: 62  AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 121
               L  A ++ KK A      + C   I+         GV KE ++F  L+    ++ L
Sbjct: 212 ---FLTEALVKVKKRAQGCLAPELCFQAIKAATEQPFADGVRKERELFNILLTSGQAKAL 268

Query: 122 VHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            + FFA+RA  K    +    K   P+ +RK AVIG G MG GI T+ +   I VV  E 
Sbjct: 269 QYAFFAERAVEKWTTPSGASWKTASPQPIRKAAVIGLGTMGRGIVTSLVKAKIPVVALEQ 328

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM-----LKGVLDYSEFKDVDMVIEA 233
           + EYL  G K +      L+ R  +  ++    L       L+  +D+   +DVD+VIEA
Sbjct: 329 DLEYLNTGRKAVML----LLEREAMKMEQGGQTLDFNNPARLQFAVDFDVLRDVDLVIEA 384

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E++ LK++IF++L + C P   L TNTS ++++ +   TS   ++IG HFFSPAHVM 
Sbjct: 385 VFENMALKKEIFNKLSRICKPEAFLCTNTSALNIDEIASVTSRPQQVIGTHFFSPAHVMR 444

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLEI+    TS   I   M + K++KKV VVVGNC GF  NR  FPY Q A  L+  G  
Sbjct: 445 LLEIIYGRHTSPTTIATAMQLAKVMKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSR 504

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS-----------FQSPL 402
              +D  +  FG  IGPF++ DLAG  V   + K+     P  +             SPL
Sbjct: 505 PEDVDQVLEDFGFKIGPFRMSDLAGLDVGWRSRKDQGLTGPTLAPGTSARQRHGYRYSPL 564

Query: 403 VDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
            DLL + GR G+  GKG Y YEK  G   KPDP +   + E R    I    K   + ++
Sbjct: 565 PDLLCEKGRFGQKTGKGWYQYEKAGGRTAKPDPWIHSFLSEYRDTHQI----KTRFIDQE 620

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EI+E  LF ++NE   +L EGI      LD   + G  +P +RGG +F+A  VG   +  
Sbjct: 621 EILERCLFTLINEGFDILAEGIASGPEHLDVVYINGYGWPKHRGGPMFYASTVGLPNILA 680

Query: 521 SLKKWSQLYGNF--FKPSRFLEERATKGIP 548
            L+K+S+++ +    +PS FL++    G P
Sbjct: 681 KLQKYSEIHPDVPQLRPSAFLKKLVAMGNP 710


>gi|53718058|ref|YP_107044.1| trifunctional enoyl-CoA hydratase/3,2-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Burkholderia
           pseudomallei K96243]
 gi|126452416|ref|YP_001064753.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|217419418|ref|ZP_03450924.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 576]
 gi|242317764|ref|ZP_04816780.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase family protein [Burkholderia pseudomallei
           1106b]
 gi|254295974|ref|ZP_04963431.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 406e]
 gi|386863120|ref|YP_006276069.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1026b]
 gi|403517122|ref|YP_006651255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei BPC006]
 gi|418537788|ref|ZP_13103423.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1026a]
 gi|418542107|ref|ZP_13107563.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1258a]
 gi|418548433|ref|ZP_13113547.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1258b]
 gi|52208472|emb|CAH34407.1| putative trifunctional protein [includes: enoyl-CoA hydratase;
           3,2-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei K96243]
 gi|126226058|gb|ABN89598.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 1106a]
 gi|157806255|gb|EDO83425.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 406e]
 gi|217396722|gb|EEC36738.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 576]
 gi|242141003|gb|EES27405.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase family protein [Burkholderia pseudomallei
           1106b]
 gi|385349704|gb|EIF56271.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1026a]
 gi|385356414|gb|EIF62523.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1258a]
 gi|385358086|gb|EIF64114.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1258b]
 gi|385660248|gb|AFI67671.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1026b]
 gi|403072766|gb|AFR14346.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei BPC006]
          Length = 708

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 272/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|126441399|ref|YP_001057503.1| enoyl-CoA hydratase [Burkholderia pseudomallei 668]
 gi|167917354|ref|ZP_02504445.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei BCC215]
 gi|237810655|ref|YP_002895106.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
 gi|254196939|ref|ZP_04903363.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei S13]
 gi|418392585|ref|ZP_12968350.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 354a]
 gi|418558385|ref|ZP_13122951.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 354e]
 gi|126220892|gb|ABN84398.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase family protein [Burkholderia pseudomallei
           668]
 gi|169653682|gb|EDS86375.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei S13]
 gi|237504800|gb|ACQ97118.1| peroxisomal bifunctional enzyme [Burkholderia pseudomallei MSHR346]
 gi|385363373|gb|EIF69153.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 354e]
 gi|385375227|gb|EIF80015.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 354a]
          Length = 708

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 272/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|254181976|ref|ZP_04888573.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 1655]
 gi|184212514|gb|EDU09557.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 1655]
          Length = 708

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 272/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|311106832|ref|YP_003979685.1| enoyl-CoA hydratase [Achromobacter xylosoxidans A8]
 gi|310761521|gb|ADP16970.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [Achromobacter xylosoxidans A8]
          Length = 706

 Score =  275 bits (703), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 285/559 (50%), Gaps = 32/559 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVS-----RLWALDIAARRKPWIRSLHRTDK 55
           +ML  K +T+    + GL+DA+    + L        +L AL    RR         T  
Sbjct: 157 LMLSGKHLTAGSAREAGLVDALSDEADPLDAGLAYTRQLLALGAGPRR---------TRD 207

Query: 56  LGSLSE---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 112
            G+L +   A   +  A  +  +T   +      ++ +   I      G+  E  +F + 
Sbjct: 208 AGALEDRVAALAQVDAAAERVARTTRGLYSPAKIVEAVRAAIEQPFEEGLRTERALFLQC 267

Query: 113 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY 172
           +      GLVH FFA+R T+K+P       +PR + ++ ++GGG MG+GIA + +     
Sbjct: 268 LDSPQRAGLVHAFFAERDTAKMPGQEPA--RPRRLERIGIVGGGTMGAGIAVSALDAGFP 325

Query: 173 VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
           V + E +   L +G   +      LV +G++  D+ +  +    G   Y    D D++IE
Sbjct: 326 VTMVEQDEAALERGRGRVAQVYELLVKKGRIGADERDARMARYTGSTRYEALDDADLIIE 385

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + +KQ +F++L++   P  +LATNTS +D+N++   T     ++G HFFSPA++M
Sbjct: 386 AVFEDMAVKQTVFAQLDRVAKPGAVLATNTSYLDVNLIAAATRGPADVLGLHFFSPANIM 445

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLE+V  + T+   +     + + ++K+PV  G C GF  NR    + Q+A +++  G 
Sbjct: 446 KLLEVVVGDHTAPDTVATGFELARRLRKIPVRAGVCDGFIGNRILAVHRQAADMMMEDGA 505

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE----FDKAFPDRSFQSPLVDLLLK 408
             + ID+A+R+FG P+GP+Q+ DLAG  +  AT K      D A   R  Q P  D L +
Sbjct: 506 SPYEIDAAVRAFGYPMGPYQMADLAGGDIGWATRKRRAPTRDPAL--RYVQIP--DRLCE 561

Query: 409 SGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
            G  G+  G+G Y Y  G++  + DP VL +I+  R  + + P     + T+++I    L
Sbjct: 562 RGWFGQKTGRGFYLYPDGARQGEQDPEVLALIDAERARAGVTPH----AYTQEDIQRRYL 617

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
             ++NE+  VL +GI  R SD+D   + G  FP YRGG + +AD+VG N V   ++ ++Q
Sbjct: 618 AAMINEAANVLHQGIAQRPSDIDVVFLSGYGFPRYRGGPMHYADSVGLNRVLADIRGYAQ 677

Query: 528 LYGNFFKPSRFLEERATKG 546
               F+KPS  L + A  G
Sbjct: 678 EDPAFWKPSPLLVQLAESG 696


>gi|326402430|ref|YP_004282511.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
           multivorum AIU301]
 gi|325049291|dbj|BAJ79629.1| putative fatty acid oxidation complex alpha subunit [Acidiphilium
           multivorum AIU301]
          Length = 698

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 187/547 (34%), Positives = 277/547 (50%), Gaps = 26/547 (4%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAR 63
           K I ++     GLIDA+V+           A+D A    P   +R   R+DK+ +     
Sbjct: 158 KMIGAKAALADGLIDAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADP 211

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
              + A  +A K    +    AC++ +          G   E + F  LV+ D SR   H
Sbjct: 212 SAFEAAAAEATKRLKGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           VFFA+R   K+P    IG + +G +  +  VIGGG MG GIA       I V + E +  
Sbjct: 272 VFFAEREAQKIPG---IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEA 328

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +G+  +       V RG L        + +  G  D+    + D+VIEAV E + LK
Sbjct: 329 ALSRGLDRVRGTYDVSVQRGALPAGTTEKRMALFSGSTDWGVMAEADIVIEAVFEELGLK 388

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           +++F+ ++    P  +LATNTST+D++ +   T     ++G HFFSPA+VM LLEIVR +
Sbjct: 389 KEVFARIDGIARPGALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGK 448

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
            +SAQ I   + VGK + KVPVVVGNC GF  NR     +     L+  G    ++D+ +
Sbjct: 449 ESSAQSIATAIAVGKTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVV 508

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
           ++FG P+GPF + DLAG  V     K        R   +P+ D L + GR G+  G+G Y
Sbjct: 509 KAFGFPMGPFAMGDLAGLDVGWRIRKH-------RGATAPVSDALCEMGRFGQKTGRGYY 561

Query: 422 TYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
            YE GS+ P PDP V  +I E      I       +++++EI+E + +P++NE+ R+LEE
Sbjct: 562 IYENGSRVPTPDPEVEALISEKATALGIT----RRAISDQEILERMTYPMINEAARILEE 617

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 539
           GI +R SD+D   V G  +P +RGG  F AD VG   +   L+ ++Q  G+    P   L
Sbjct: 618 GIAIRPSDVDVVWVYGYGWPVWRGGPCFHADLVGLKEIAARLEHYAQAVGDETLAPCALL 677

Query: 540 EERATKG 546
              A  G
Sbjct: 678 RRLAAAG 684


>gi|254187905|ref|ZP_04894417.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
 gi|157935585|gb|EDO91255.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei Pasteur 52237]
          Length = 708

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 272/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|76810920|ref|YP_332048.1| enoyl-CoA hydratase [Burkholderia pseudomallei 1710b]
 gi|254258381|ref|ZP_04949435.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase family protein [Burkholderia pseudomallei
           1710a]
 gi|76580373|gb|ABA49848.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 1710b]
 gi|254217070|gb|EET06454.1| enoyl-CoA hydratase/isomerase family/3-hydroxyacyl-CoA
           dehydrogenase family protein [Burkholderia pseudomallei
           1710a]
          Length = 708

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 176/547 (32%), Positives = 272/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|167835270|ref|ZP_02462153.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia thailandensis MSMB43]
          Length = 488

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 165/482 (34%), Positives = 244/482 (50%), Gaps = 7/482 (1%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L  AR    K +  +      +D +   +      G+  E ++F E +      GLVH F
Sbjct: 3   LDAARADVAKKSRGLFSPAKIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAF 62

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           FA+R  +K P        PR + ++ V+GGG MG+GIA A +     V + E +   L +
Sbjct: 63  FAEREAAKSPETRRAA--PRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLER 120

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G   +E    GLV +G++T       L  L G   Y      D+VIEAV E + +K+ +F
Sbjct: 121 GRAHVEKVYAGLVAKGRMTPAAQAARLARLTGGTSYEALAQADVVIEAVFEDMAVKKAVF 180

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
           +EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V   + SA
Sbjct: 181 AELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSA 240

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+     + K +KK+PV  G C GF  NR    Y  +A  ++  G   +RID AIR FG
Sbjct: 241 DVVATAFELAKKLKKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYRIDRAIREFG 300

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
            P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G Y Y  
Sbjct: 301 FPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPD 360

Query: 426 GSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVV 484
           G++   PDP V  II E R    +     P + T+ EIV   L  ++NE   V+ E I +
Sbjct: 361 GARVGTPDPEVEAIIAEERAKKGV----SPRAFTDDEIVRRYLAAMINEGANVVHERIAL 416

Query: 485 RASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
           R  D+D   + G  FP +RGG + +ADAVG   V   ++ ++     F+KPS  L +   
Sbjct: 417 RPLDVDAVFLHGYGFPRHRGGPMHYADAVGLANVLADIRAFASEDPVFWKPSPLLVDLVA 476

Query: 545 KG 546
           +G
Sbjct: 477 RG 478


>gi|209517972|ref|ZP_03266804.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia sp. H160]
 gi|209501578|gb|EEA01602.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia sp. H160]
          Length = 441

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 158/419 (37%), Positives = 238/419 (56%), Gaps = 9/419 (2%)

Query: 128 QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187
           ++  +++P     G+KPR + + AVIG G MG GIA A +   I V L + N E L +G+
Sbjct: 22  EKVAAQIPVAA--GVKPRDIGRAAVIGAGTMGGGIAMALVAAGIPVTLIDANDEGLQRGL 79

Query: 188 KTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSE 247
             I  N    + RGKL     +  L ++ G    ++ KD D+VIEAV E + LKQ IF E
Sbjct: 80  ARISDNYNQSIKRGKLDDATRDARLALITGSTAIADVKDADIVIEAVFEDLGLKQGIFRE 139

Query: 248 LEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQV 307
           L++      ILATNTS +D+N +   T+    ++GAHFFSPAHVM LLE+VR + TS + 
Sbjct: 140 LDRHAKAGAILATNTSGLDINEIAAVTTRAQDVVGAHFFSPAHVMRLLEVVRADNTSDEA 199

Query: 308 ILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP 367
           ++ LM +G+ + KV V      GF  N  F  Y++ A  LV  G     +D+A++ FG  
Sbjct: 200 VVTLMELGRRMGKVAVYSLVYPGFIGNALFRNYNREAHFLVEDGALPHEVDAALKDFGYA 259

Query: 368 IGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGS 427
           +G F + D+AG  V   T K      P+    + L+  L++ GR G+ NGKG Y YE G 
Sbjct: 260 MGIFAVHDMAGNDVGYQTRKAQMATRPNDRRWNDLIMKLVEMGRLGQKNGKGWYRYEAGD 319

Query: 428 K-PKPDPSVLP-IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 485
           + P  DP +   I+EE  RL     G    S+ ++EI++  ++ ++NE  ++LE+GI +R
Sbjct: 320 RTPHRDPEIEQYIVEESARL-----GITRRSIPKEEIIKRCMYGMINEGAKLLEQGIALR 374

Query: 486 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
           ASD+D   V G  FP+  GG +++AD +G   VY  +K+  + YG ++KP+  LE+ A 
Sbjct: 375 ASDIDVVYVTGYGFPAKLGGPMYYADQIGLANVYQDIKRLYEEYGYWWKPAPLLEKLAA 433


>gi|148259275|ref|YP_001233402.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Acidiphilium cryptum
           JF-5]
 gi|146400956|gb|ABQ29483.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Acidiphilium cryptum JF-5]
          Length = 698

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 187/547 (34%), Positives = 276/547 (50%), Gaps = 26/547 (4%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP--WIRSLHRTDKLGSLSEAR 63
           K I ++     GLIDA+V+           A+D A    P   +R   R+DK+ +     
Sbjct: 158 KMIGAKAALADGLIDAIVSD------PVQGAIDFAHTVDPAKLVRVRDRSDKIAAAKADP 211

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
              + A  +A K    +    AC++ +          G   E + F  LV+ D SR   H
Sbjct: 212 SAFEAAAAEATKRLKGVEAPAACVEAVRNSFTLPFDEGARAEQQAFMRLVVGDQSRAQRH 271

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVR--KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           VFFA+R   K+P    IG + +G +  +  VIGGG MG GIA       I V + E +  
Sbjct: 272 VFFAEREAQKIPG---IGPEVKGAKIGRAVVIGGGTMGGGIAMNFANAGIPVTIVETDEA 328

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +G+  +       V RG L        + +  G  D+    + D+VIEAV E + LK
Sbjct: 329 ALARGLDRVRGTYDVSVQRGALPAGTTEKRMALFSGSTDWGVIAEADIVIEAVFEELGLK 388

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           +++F+ L+    P  +LATNTST+D++ +   T     ++G HFFSPA+VM LLEIVR +
Sbjct: 389 KEVFARLDGIARPGALLATNTSTLDVDAIAAATKRPGDVLGMHFFSPANVMKLLEIVRGK 448

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
            +SAQ I   + VGK + KVPVVVGNC GF  NR     +     L+  G    ++D+ +
Sbjct: 449 ESSAQSIATAIAVGKTLGKVPVVVGNCDGFVGNRMLARRTIECERLMLEGALPQQVDAVV 508

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
           ++FG P+GPF + DLAG  V     K        R   +P+ D L + GR G+  G+G Y
Sbjct: 509 KAFGFPMGPFAMGDLAGLDVGWRIRKH-------RGATAPVSDALCEMGRFGQKTGRGYY 561

Query: 422 TYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
            YE GS+ P PDP V  +I E         G    +++++EI+E + +P++NE+ R+LEE
Sbjct: 562 VYENGSRVPTPDPEVEALISE----KAAALGVTRRAISDQEILERMTYPMINEAARILEE 617

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 539
           GI +R SD+D   V G  +P +RGG  F AD VG   +   L+ ++   G+    P   L
Sbjct: 618 GIAIRPSDVDVVWVYGYGWPVWRGGPCFHADLVGLKEIAARLEHYATAVGDETLAPCALL 677

Query: 540 EERATKG 546
              A  G
Sbjct: 678 RRLADAG 684


>gi|424864444|ref|ZP_18288347.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [SAR86 cluster bacterium SAR86B]
 gi|400759190|gb|EJP73372.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [SAR86 cluster bacterium SAR86B]
          Length = 715

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 159/456 (34%), Positives = 250/456 (54%), Gaps = 11/456 (2%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
           +G+ KE ++F E +M      ++H+FF +RA +K+ +V     K   ++K AVIG G MG
Sbjct: 249 NGLKKEGELFLECLMHPQREAMIHIFFGERAAAKIDDVPRETQKQE-IKKAAVIGSGTMG 307

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
            GIA       I V + + + + L +GI  I  N   +V RG+L  +       ++   L
Sbjct: 308 GGIAMCFANAGIPVHILDQDEDNLKRGIGVINKNYEMMVERGRLKPEAKEFVTGLITSSL 367

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           +Y +  DVD+V+EAV E++ LK+KIF +L++   P  ILATNTS +D++ +   T   ++
Sbjct: 368 NYDDIHDVDIVVEAVYENIDLKKKIFEQLDEVTKPETILATNTSGLDVDGIASVTKRPEK 427

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA++M LLE+VR   +S + +  +M +GK +KK  VV  N  GF  NR  F 
Sbjct: 428 VVGTHFFSPANIMRLLEVVRGNESSNETLATIMDLGKKLKKASVVSLNAPGFIGNRMLFG 487

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
           YS  A +L+  G     ID A+ +FG+ +GPF++ DL G  +     K      P    Q
Sbjct: 488 YSNQANMLLLEGALPHEIDGALEAFGMNMGPFRMFDLVGLDLGWRARKLGKLETP---LQ 544

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
           + + D L    R G+ NGKG Y Y +GS+ P P P    +  +    +NI    +   ++
Sbjct: 545 AKISDALCDQDRFGQKNGKGFYNYVEGSRAPHPAPENEELYIKVSEENNI----ERRQIS 600

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           E EIVE  +  +VNE  R+L EG+  RA+D+D   + G  FP +RGG + +A+++G + +
Sbjct: 601 EDEIVERCMLGLVNEGTRILSEGVAQRAADIDIVYINGYGFPIWRGGPMHYANSMGLDKI 660

Query: 519 YTSLKKW-SQLYGNFFKPSRFLEERATKGIPL-SAP 552
              L  +  +   + F+ S FL   A  G  L +AP
Sbjct: 661 VDRLDYYFEKTQSDVFRASEFLRNLANNGQKLGNAP 696


>gi|260776409|ref|ZP_05885304.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607632|gb|EEX33897.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 707

 Score =  274 bits (700), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 174/547 (31%), Positives = 291/547 (53%), Gaps = 19/547 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + +++  KLG++DAVV    LL+V++ +    A + +   +   +   + +  
Sbjct: 168 MILTGKQLRAKKAKKLGVVDAVVPETILLEVAKSFVEKHAGKSRAKRKVSTKEKLIANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + ++   +KT  N P  +A L+VI  G+  G   G  KEA+ F ELVM   S
Sbjct: 228 LGRKVIFEQASKKTIEKTRGNYPAAEAILEVIRHGLEKGFEKGQQKEAQRFGELVMTSES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K  N +D   +P+ + + AV+GGGLMG+GI+   +    + V +K+
Sbjct: 288 KALRSIFFATTEMKK-ENGSDA--EPKAIERAAVLGGGLMGAGISHVSVSKAKVPVRIKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +K           R  +++ +  + +  + G  D++ F   D+V+EAV E 
Sbjct: 345 VSNDGVLNALKYNYKLFDKQRKRRIISKAQLQSKMLQMSGGTDFTSFNHADVVVEAVFED 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++EK      I ATNTS++ ++ + +K    + I+G H+FSP   MPL+E+
Sbjct: 405 LNLKQQMVADVEKNAKDTTIFATNTSSLPIHQIADKAQRPENIVGLHYFSPVEKMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  E TS + I  ++   +   K P+VV +C GF VNR   PY   A  ++  G  + ++
Sbjct: 465 IPHETTSDETISTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMSGEPIEQL 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKAN 416
           D A+ +FG P+GP  LLD  G  + A       +   +R FQ P V D+LL   R G+  
Sbjct: 525 DKALLNFGFPVGPITLLDEVGVDIGAKIMPILVEELGER-FQGPDVFDILLNDNRKGRKT 583

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG YTY KG K + D SV        +L ++ P  K   + EK+I    + P++NE+ R
Sbjct: 584 GKGFYTY-KGKKKEVDKSVY-------KLLSLSPESK---MAEKDIAMRCVLPMLNEAVR 632

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + +Q YG+ F P 
Sbjct: 633 CLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGVKKLVEMMNENAQKYGDRFAPC 692

Query: 537 RFLEERA 543
             L  RA
Sbjct: 693 DGLLTRA 699


>gi|119478556|ref|ZP_01618499.1| fatty oxidation complex, alpha subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448460|gb|EAW29709.1| fatty oxidation complex, alpha subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 699

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/556 (31%), Positives = 301/556 (54%), Gaps = 19/556 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+     + + +   +GL+D ++  + LL+ +  +A  + A   P  R    T    + +
Sbjct: 150 MITSGNPVAAAKAHSMGLVDHIINGD-LLEGAMSYAERLIADNAPCKRVSDMTIDPATAT 208

Query: 61  EA-----REVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
           +A     R+  K+A+    + AP     Q  +D ++  +      G++KE ++F E V  
Sbjct: 209 DALFDSWRK--KMAKKSRGQLAP-----QKIIDAVQIAVTSSVPEGMVKERELFTECVQS 261

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
             S  + H+FFA+RA +KV ++    +  R + KV ++GGG MG GIA       I VV+
Sbjct: 262 TQSSAMRHIFFAERAAAKVNDLAKDTVD-RTISKVGILGGGTMGGGIAMNFANVGIPVVM 320

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E+N + L +G+  +  N    V++GKL++++  + L ++ G  +Y +  DVD+VIEAV 
Sbjct: 321 IEINDDALARGLDIVRKNYSITVSKGKLSEEQMKDCLSLISGSTNYDDLGDVDLVIEAVF 380

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +K+++F++L+KAC    ILATNTS  D++ +   T+  D +IG HFFSPA+VM LL
Sbjct: 381 EDLDVKKEVFAKLDKACKQGAILATNTSYQDVDKIAAATTRPDDVIGMHFFSPANVMKLL 440

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E+VR E+T+  VI   M + K I K+PV+ G C GF  NR      +  +L +  G    
Sbjct: 441 EVVRGEKTAGDVISTTMKLAKKINKIPVLSGVCYGFIGNRMLRCSVRENQLCMMEGASPE 500

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
           ++D+ ++ +G+ +GP  + DLAG  V+    +   +          +VD +++ GR G+ 
Sbjct: 501 QVDAVMQGWGMAMGPLAVGDLAGLDVSYKARQALTEEQKGDPKSYCIVDAMVEMGRLGQK 560

Query: 416 NGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
           +G G Y Y+  ++ +  DP V+ +IE       I    +   +++ EI+  I    +NE 
Sbjct: 561 SGAGYYRYDPDTRARSSDPEVMAVIERLSAEHAI----ERREISDDEILNRITCAWINEG 616

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
             +L+EGI  R+SD+D   V G  FP YRGG + +AD +G   VY  + ++ + +G+ +K
Sbjct: 617 AYILQEGIAQRSSDIDVVYVNGYGFPIYRGGPMHYADTIGVKKVYDMICEFQRQHGDVWK 676

Query: 535 PSRFLEERATKGIPLS 550
           PS  LE+ A +    S
Sbjct: 677 PSALLEQLAAENKTFS 692


>gi|389695783|ref|ZP_10183425.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
 gi|388584589|gb|EIM24884.1| 3-hydroxyacyl-CoA dehydrogenase [Microvirga sp. WSM3557]
          Length = 695

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/541 (32%), Positives = 282/541 (52%), Gaps = 14/541 (2%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + + + E  +LGLID + +S +L + +   A ++    +P  R+  R+  +  L      
Sbjct: 164 RPVRAPEALRLGLIDRL-SSGDLRQDAMALARELIG--QPLRRTGERS--VAPLDAETAS 218

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
            K+A ++ K      P   A L ++   +      G+ +E + F EL     S  L H F
Sbjct: 219 AKVAEIRKKARGAEAPGKAAELVLLAANLPL--QDGMARERETFLELRSSAQSAALRHAF 276

Query: 126 FAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185
           F +R   ++P +  +  +PR ++KV ++G G MGSGIA A       V + E + + L  
Sbjct: 277 FGEREVMRLPGLDSV--EPRPIQKVGIVGAGTMGSGIAIAFADAGFDVRIVETSEQALSA 334

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G   +       V  G++T    +  LK +   +  S   D D+VIEAV E + +K+ +F
Sbjct: 335 GQARVTDVYDKQVASGRITPAAQDERLKAIGYAIGTSSLLDRDLVIEAVFEDLEVKRALF 394

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
            +L+   PP  ILATNTS +D++++   TS    ++G HFFSPAHVM LLEIVRT+ T+A
Sbjct: 395 RDLDAILPPGTILATNTSYLDVSLIAAATSRPADVVGLHFFSPAHVMKLLEIVRTDATAA 454

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
            V+   + + K ++K+PVV   C GF  NR    Y Q A  L+  G     +D+A+ +FG
Sbjct: 455 DVVATGLALAKRLRKIPVVCRVCDGFVGNRILSRYRQQAEYLLEEGALPHEVDAALEAFG 514

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
            P+GPF + DLAG  +  A  K        R     + D L ++GR G+  G G Y YE 
Sbjct: 515 FPMGPFAVSDLAGLDINWARRKRLAPTRDPRERYVDIADRLCEAGRFGRKTGAGWYRYED 574

Query: 426 GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 485
           G + + DP+V  ++EE    S+   G    +++  EI   I   +VNE+C++L+E IV R
Sbjct: 575 GKR-EIDPAVTALVEE----SSQRRGLTRRAISADEIQSRIRAAIVNEACKILDERIVER 629

Query: 486 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 545
             D+D   + G  +P++RGG +F AD VG   +   +K+ +   G  ++P++ L +RA  
Sbjct: 630 PLDVDVVMMHGYGYPAWRGGPLFEADRVGLQPILAQVKERAAQDGPGWEPAKGLVDRAAS 689

Query: 546 G 546
           G
Sbjct: 690 G 690


>gi|118094872|ref|XP_422690.2| PREDICTED: peroxisomal bifunctional enzyme [Gallus gallus]
          Length = 726

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 203/569 (35%), Positives = 290/569 (50%), Gaps = 40/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVV---TSEELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSE 61
           + I + E  KLGL+D VV   T E  ++++ +L    +  RR     SL    +L ++  
Sbjct: 156 RHIPATEALKLGLVDEVVEENTVEAAIRLANKLIGQPLGHRR----LSLKPVPRLPNMEA 211

Query: 62  AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGL 121
               L  A ++ KK A      + C   I+         GV KE ++F  L+    ++ L
Sbjct: 212 ---FLSEALVKVKKRAQGCLAPELCFQAIKAATEQPFADGVRKERELFNILLTSGQAKAL 268

Query: 122 VHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            + FFA+RA  K    +    K   P+ +RK AVIG G MG GI T+ +   I VV  E 
Sbjct: 269 QYAFFAERAVEKWTTPSGASWKSASPQPIRKAAVIGLGTMGRGIVTSLVKAKIPVVALEQ 328

Query: 179 NSEYLLKGIKTI----EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           N EYL  G K +    E     +  +G  T D  N A   L+  +D+   +DVD+VIEAV
Sbjct: 329 NLEYLNTGRKAVMLLLEREAMKM-EQGAQTLDFHNPA--QLQFTVDFDVLRDVDLVIEAV 385

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E++ LK++IFS+L + C P   L TNTS ++++ +   T    ++IG HFFSPAHVM L
Sbjct: 386 FENMALKKEIFSKLSRICKPEAFLCTNTSALNIDDIASVTGRPQQVIGTHFFSPAHVMRL 445

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           LEI+    TS   I   + + K++KKV VVVGNC GF  NR  FPY Q A  L+  G   
Sbjct: 446 LEIIYGRHTSPNTIATAIQLAKVMKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRP 505

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE-------FDKAFPDRSFQ----SPLV 403
             +D  +  FG  IGPF++ DLAG  V   + K+            P R       SPL 
Sbjct: 506 EDVDQVLEDFGFKIGPFRMSDLAGLDVGWRSRKDQGLTGPSLAPGTPVRQRHGYRYSPLP 565

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           DLL + GR G+  GKG Y YEK  G   KPDP +   + E R    I    K   + ++E
Sbjct: 566 DLLCEKGRFGQKTGKGWYQYEKAGGRTAKPDPWIHSFLREYRDTHQI----KTRFIDQEE 621

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  LF ++NE   +L EGI      LD   + G  +P +RGG +F+A  VG   + T 
Sbjct: 622 ILERCLFTLINEGFDILAEGIASGPEHLDVVYINGYGWPKHRGGPMFYASIVGLPNILTK 681

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+S+++ +    +PS FL++    G P
Sbjct: 682 LQKYSEIHPDVPQLRPSAFLKKLVAVGNP 710


>gi|170694988|ref|ZP_02886137.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
           C4D1M]
 gi|170140086|gb|EDT08265.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
           C4D1M]
          Length = 697

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 154/445 (34%), Positives = 251/445 (56%), Gaps = 9/445 (2%)

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E   F EL+    S+ L + FFA+R  +K+ +V+   ++PR +R  A++G G MG+GIA 
Sbjct: 255 ERARFLELLETPESKALRYNFFAERNAAKIADVS-ADVRPRNIRTAAIVGAGTMGAGIAV 313

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 223
                 I V L + ++E L +G+  I       V +G+++ D+ +  L  +   +   S 
Sbjct: 314 CFANAGIRVALIDASTEGLERGMSIIRGVFDADVVKGRISADERDRRLAFVAPTVSLPSA 373

Query: 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 283
             DVD+V+EA  E + +KQ+IF EL++  PPH ILATNTS +D++ +   TS    ++G 
Sbjct: 374 VSDVDLVVEAAFEQLDIKQQIFRELDRLAPPHAILATNTSMLDIDAIAAVTSRPQDVVGM 433

Query: 284 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 343
           HFFSPAHVM LLE+VR   TS +V++ +M + + ++K  V+   C GF  NR    Y Q 
Sbjct: 434 HFFSPAHVMRLLEVVRCRMTSDEVLITVMQIARKLRKTAVMSRVCDGFIGNRMLQRYLQQ 493

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
           A  L+  G  V +IDSA+  FG+ +GPF + DL+G  +  +  K      PD  + S + 
Sbjct: 494 ALFLLDEGCTVEQIDSAMERFGMAMGPFAVGDLSGLDIGWSIRKRRYVERPDMMY-SRVA 552

Query: 404 DLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           D + ++ R G+ +GKG Y YE+ S+ +  DP    I+   R+   +       +V E EI
Sbjct: 553 DRICEARRLGQKSGKGWYRYEQNSRKRISDPEAAAIVSAYRQEIGV----PSRAVGEHEI 608

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           V+ ++  ++NE   +L+EG+  RASD+D     G  FP  RGG +++A+ +G + V T +
Sbjct: 609 VDRLMLALINEGALILQEGVAQRASDIDVVYATGYGFPVTRGGPMYYANTLGLDTVLTRI 668

Query: 523 KKWSQLY-GNFFKPSRFLEERATKG 546
           +++   Y G  ++P+  L + A +G
Sbjct: 669 RQFQSGYQGGQWQPAELLVKLAQRG 693


>gi|323526726|ref|YP_004228879.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia
           sp. CCGE1001]
 gi|323383728|gb|ADX55819.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein protein
           [Burkholderia sp. CCGE1001]
          Length = 706

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 282/550 (51%), Gaps = 14/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  +++E   LGL+D +  S ++L     +A  + A       +  RT    +LS
Sbjct: 157 LMLSGRHASAKEALALGLVDRLGASGDILAEGLAYAHALLAAHA----TARRTRDAAALS 212

Query: 61  E---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           +   +   +  AR + +K +  +      +D +E  +      G+  E ++F + +    
Sbjct: 213 DRAASLAAVVAARTETEKKSRGLFSPLKIVDAVEAAVTQPFEEGLRVERQLFLQCLDSPQ 272

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
             GLVH FFA+R   K P   D   KPR +  + V+GGG MG+GIA A +   + V + E
Sbjct: 273 RAGLVHAFFAEREVLKAPETRDA--KPRALAAIGVVGGGTMGAGIAVAVLDAGLPVTMIE 330

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            +   L +G   IE    GL+ +G+++ +K    +    G   Y    + D+VIEAV E 
Sbjct: 331 RDEASLARGRAHIEKVYDGLIAKGRMSAEKKAELMARWTGSTSYEALANADLVIEAVFED 390

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +KQ +F+EL++ C    +LATNTS +D++ +    S    +IG HFFSPA++M LLE+
Sbjct: 391 LAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAAGISRPADVIGLHFFSPANIMKLLEV 450

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           V     SA V+     + K ++K PV  G C GF  NR    Y  +A  ++  G   ++I
Sbjct: 451 VVPRAVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRILAVYRSAADAMMEDGASPYQI 510

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D+A+R+FG P+GPFQ++DLAG  +  A  K         +    + D L + G  G+  G
Sbjct: 511 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTG 570

Query: 418 KGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           +G Y Y +GS+  +PDP V  II+  R  + I     P S T+ EI+   +  ++NE   
Sbjct: 571 RGFYLYPEGSRSGQPDPEVEAIIDAERARAGI----TPRSFTDDEIMRRYMAAMINEGAN 626

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           V+ E I +R  D+D   + G  FP YRGG + +AD VG   V   ++++++    F++ S
Sbjct: 627 VVHERIALRPLDVDVTLLYGYGFPRYRGGPMKYADMVGLPRVLADIREFAKEDPLFWQAS 686

Query: 537 RFLEERATKG 546
             L E   +G
Sbjct: 687 PLLVELVERG 696


>gi|119474779|ref|ZP_01615132.1| fatty oxidation complex, alpha subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119450982|gb|EAW32215.1| fatty oxidation complex, alpha subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 694

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 172/549 (31%), Positives = 284/549 (51%), Gaps = 19/549 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+     I ++E    GLI  +VT  +L   +  +A  + A  KP +R   +  ++ +  
Sbjct: 155 MVTSGDQIGADEALASGLISEIVT--DLRGDAIAFAKKVVAEGKPLVRIRDQNAEIDAAK 212

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSR 119
              E+    R    + +      +  +  IE  +    +   LK EA +F+EL+    S 
Sbjct: 213 AKPELFSNIRKAIARKSRGFKAPEYNIRCIEAAVNSDNFDDGLKVEADLFRELMTGGQSA 272

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEV 178
              H FFA+R  +K+P+V     +   +  V VIG G MG GI+  +ILN    V + E 
Sbjct: 273 AQRHFFFAERQAAKIPDVPKETPEIE-INSVGVIGAGTMGGGISM-NILNIGTPVTIVET 330

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E L +GI  +  N      +G+++Q    + + +L G L+  +  D D+VIEAV E++
Sbjct: 331 TQEALDRGIAIVRKNYENTAKKGRISQQDVEDRMALLTGSLNIEDLADCDLVIEAVFENM 390

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K++IF++L+K      ILA+NTS +D+N +   T   + +IG HFFSPA+VM LLE+V
Sbjct: 391 KVKKEIFAKLDKIVKQGAILASNTSALDVNEIASATVRPESVIGLHFFSPANVMKLLEVV 450

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R +++S  VI   M   K I KV  +VG C GF  NR   P  Q A+ L+  G    ++D
Sbjct: 451 RGDKSSHPVIKTSMAFAKRIGKVAALVGVCPGFVGNRILAPRQQQAQQLILEGALPHQVD 510

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
             +  FG P+GPFQ+ DLAG  +  +      K          L D L+++GR G+    
Sbjct: 511 KVLFDFGKPMGPFQMSDLAGLDIGWSEETSNGKEV--------LRDRLVEAGRRGQKTSA 562

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G Y Y++   P P P +  II E    +    G     ++++EI+   ++P++NE  ++L
Sbjct: 563 GYYDYDENRVPSPSPEIEKIILEFSEKN----GKTRREISDEEILIRCIYPMINEGAKIL 618

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSR 537
           EEGI +R+SD+D   V G  +P YRGG +F+ D++G   +   +++  +  G+  ++P+ 
Sbjct: 619 EEGIAIRSSDIDVVWVYGYGWPIYRGGPMFYGDSIGLPKIVAKMRELKEQTGDPMWEPAA 678

Query: 538 FLEERATKG 546
            + + A +G
Sbjct: 679 LMVKLAEEG 687


>gi|167561369|ref|ZP_02354285.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           oklahomensis EO147]
          Length = 478

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 241/461 (52%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +   +      G+  E ++F E +      GLVH FFA+R  +K P  T  G  PR 
Sbjct: 14  VDAVAAALAQPFDEGLRAERRLFLECLDSPQRAGLVHAFFAEREAAKSPE-TRRG-APRP 71

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           V ++ V+GGG MG+GIA A +   + V + E +   L +G   +E    GLV +G++T  
Sbjct: 72  VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPA 131

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L   KG   Y      D+VIEAV E + +K+ +F+EL + C P  +LATNTS +D
Sbjct: 132 AQAARLARFKGGTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKPGAVLATNTSYLD 191

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA++M LLE+V   + SA V+     + K +KK+PV  G
Sbjct: 192 IDEIAASVERASDVIGLHFFSPANIMKLLEVVVPAQVSADVVATAFELAKKLKKIPVRAG 251

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  ++  G   ++ID A+R FG P+GP+Q++DLAG  +  AT 
Sbjct: 252 VCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAVREFGFPMGPYQVVDLAGGDIGWATR 311

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R     + D L + G  G+  G+G Y Y  G++   PDP V  II++ R  
Sbjct: 312 KRRAPTRDPRLRYVEIPDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIDDERAK 371

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             + P     + T++EI+   L  ++NE   V+ E I +R  D+D   + G  FP YRGG
Sbjct: 372 RGVTPR----AFTDEEIIRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGG 427

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ ++     F+KPS  L +   +G
Sbjct: 428 PMHYADTVGLANVLADIRAFANEDPVFWKPSPLLVDLVARG 468


>gi|53724340|ref|YP_104708.1| fatty oxidation complex subunit alpha [Burkholderia mallei ATCC
           23344]
 gi|67640367|ref|ZP_00439176.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|121601249|ref|YP_991561.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei SAVP1]
 gi|124386354|ref|YP_001027365.1| fatty oxidation complex subunit alpha [Burkholderia mallei NCTC
           10229]
 gi|126450585|ref|YP_001082330.1| enoyl-CoA hydratase [Burkholderia mallei NCTC 10247]
 gi|167003208|ref|ZP_02268998.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei PRL-20]
 gi|254175157|ref|ZP_04881818.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|254201805|ref|ZP_04908169.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei FMH]
 gi|254207134|ref|ZP_04913485.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei JHU]
 gi|52427763|gb|AAU48356.1| fatty oxidation complex, alpha subunit, putative [Burkholderia
           mallei ATCC 23344]
 gi|121230059|gb|ABM52577.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei SAVP1]
 gi|124294374|gb|ABN03643.1| putative fatty oxidation complex, alpha subunit [Burkholderia
           mallei NCTC 10229]
 gi|126243455|gb|ABO06548.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei NCTC 10247]
 gi|147747699|gb|EDK54775.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei FMH]
 gi|147752676|gb|EDK59742.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei JHU]
 gi|160696202|gb|EDP86172.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei ATCC 10399]
 gi|238521067|gb|EEP84521.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei GB8 horse 4]
 gi|243061205|gb|EES43391.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia mallei PRL-20]
          Length = 708

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 271/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +R G + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRDGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|323493352|ref|ZP_08098475.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           brasiliensis LMG 20546]
 gi|323312438|gb|EGA65579.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           brasiliensis LMG 20546]
          Length = 706

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 289/547 (52%), Gaps = 19/547 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG+ DAVV    LL+V++ +      + K   ++  +   + +  
Sbjct: 168 LILTGKQLRAKKAKKLGVADAVVPQTVLLEVAKSFVEKHTGKSKAKRKASTKEKLIANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P   A L+VI  G+  G   G  KEA+ F ELVM + S
Sbjct: 228 LGRKVIFDQAAKKTREKTRGNYPAADAILEVIRFGLEKGFEKGQKKEAERFGELVMTNES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++         P+ + + AV+GGGLMG+GI+   +    + V +K+
Sbjct: 288 KALRSIFFA---TTEMKKENGSYADPKALERAAVLGGGLMGAGISHVSVAKAKVPVRIKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +K           R  L++ +  + +  L G  D++ F   D+VIEAV E 
Sbjct: 345 VSNDGVLNALKYNYKLFEKQRKRRILSKAQLQSKMLQLSGGTDFTTFNHTDIVIEAVFED 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E+      I ATNTS++ ++ + EK +  + ++G H+FSP   MPL+E+
Sbjct: 405 LQLKQQMVADVEENAKDSTIFATNTSSLPIHQIAEKAARPENVVGLHYFSPVEKMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  E TSA+ I  ++   +   K P+VV +C GF VNR   PY   A  ++  G  + ++
Sbjct: 465 IPHEGTSAETISTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQL 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKAN 416
           D+A+ +FG P+GP  LLD  G  + A           +R FQ P V D LL   R G+ +
Sbjct: 525 DTALLNFGFPVGPITLLDEVGVDIGAKIMPILVNELGER-FQGPDVFDKLLNDDRKGRKS 583

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG YTY KG K + D SV        +L  + P  K   + EK+I    + P++NE+ R
Sbjct: 584 GKGFYTY-KGKKKEVDKSVY-------KLLGLTPESK---LAEKDIAMRCVLPMLNEAVR 632

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+    D D  ++ G+ FP + GG   + D +G   +   +   +Q YG+ F P 
Sbjct: 633 CLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGIKKLVEIMNDHAQKYGDRFAPC 692

Query: 537 RFLEERA 543
             L  RA
Sbjct: 693 DGLLTRA 699


>gi|452964617|gb|EME69653.1| glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           [Magnetospirillum sp. SO-1]
          Length = 703

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/449 (36%), Positives = 246/449 (54%), Gaps = 9/449 (2%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+  EA + ++L     +R + H+FFA R   K+P +T   +K R +RKV +IG G MG 
Sbjct: 249 GLKLEADISRQLEHAVEARAMRHLFFADREVRKIPGITK-DIKARPIRKVGIIGAGTMGG 307

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GIA       + V + +V+ E L +G+  I  N    V+RG LT ++  + + +L    D
Sbjct: 308 GIAMCFANIGVPVTIIDVSDENLQRGLGIIRKNYERSVSRGSLTAEQLESRMGLLSVSTD 367

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y+  KD D+ IEAV E + LK+ IF+ L+   P   IL TNTST+D++ +   T     +
Sbjct: 368 YAALKDADLAIEAVFEKMELKKDIFARLDAVLPAGAILGTNTSTLDIDEIAATTKRPADV 427

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG HFFSPA+VMPLLEIV+  +TS  V+L  + + K+IKK  VV   C GF  NR   PY
Sbjct: 428 IGLHFFSPANVMPLLEIVQGAKTSMDVLLTALDMAKLIKKTGVVSKVCYGFIGNRMMDPY 487

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
            + A  +V  G     ID A+  +G+ +G   + D+AG  V   T        PD     
Sbjct: 488 GREAERMVLEGATPADIDGALEGWGMAMGILAVYDMAGIEVGDNTRIANPHMVPDDPSFY 547

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIE-ECRRLSNIMPGGKPISVT 458
               LL+ +   G+  G+G Y Y+   + + P P V+ ++  E +RL+  +P  KP    
Sbjct: 548 RCSALLVANKWLGQKTGRGYYRYDSPDRKRAPCPEVIEMMHAEGKRLN--VPARKP---G 602

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           + EI+E  L+ ++NE  ++LEEGI +RASD+D     G  FP YRGG +F+AD VG   +
Sbjct: 603 KDEILERCLYSMINEGAKLLEEGIALRASDIDVVYTAGYGFPRYRGGPMFYADTVGLKVI 662

Query: 519 YTSLKKWSQ-LYGNFFKPSRFLEERATKG 546
           Y  + ++ + L   ++ P+  LE+ A  G
Sbjct: 663 YDKIVEFGKTLDPRYWTPAPLLEKLAKSG 691


>gi|15806500|ref|NP_295210.1| enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [Deinococcus radiodurans R1]
 gi|6459246|gb|AAF11052.1|AE001993_2 enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA
           dehydrogenase [Deinococcus radiodurans R1]
          Length = 708

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 188/554 (33%), Positives = 282/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML    I +    +LGL+D +V  + L            AR  P  R   R+ + GS  
Sbjct: 168 MMLSGNPIKAPAAKELGLVDEIVDGDLLAGAVAFARAHADAR--PLPRVSERSVEGGSP- 224

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              EV   AR   KKT          +D+ E         G   EA  F + +    SRG
Sbjct: 225 ---EVFAAAREGLKKTHRGQHSPSHIVDLAEMAATKPFQEGWDAEADRFVDSLNSPQSRG 281

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R   K+  ++        ++   +IG G MG GIA   +   I V + E + 
Sbjct: 282 LRHIFFAEREAGKIRGLSK-DTPTTDIKSAGIIGAGTMGGGIAMNFLNVGIPVTIVETSQ 340

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G+  I  N      +G++TQD     + +L   L   +    D++IEAV E++ +
Sbjct: 341 EALDRGLGVIRKNYENTAKKGRMTQDDVEKRMGLLTPTLKMEDLAGADIIIEAVFENMDV 400

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ IF+ L+K   P  ILA+NTST+D+N +   T   +++IG HFFSPA+VM LLEIVR 
Sbjct: 401 KKDIFTRLDKIAKPGAILASNTSTLDVNEIASVTGRPEQVIGLHFFSPANVMKLLEIVRA 460

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ++TS  V+   + + K IKKV VVVG C GF  NR    Y   AR +V  G     +D+A
Sbjct: 461 DKTSDSVLATSLALAKRIKKVGVVVGVCDGFVGNRMVHRYGDEARKIVEEGARPEDVDAA 520

Query: 361 IRSFGLPIGPFQLLDLA----GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           + + GLP+GPFQ+ D+A    GY +    +K   +  PD       +D ++K+GR G+  
Sbjct: 521 MNALGLPMGPFQMSDMAGLDIGYSIRQHQAKVRGEPEPDG-----WLDRIVKTGRKGQKT 575

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
             G+Y Y +  KPKP+  V  +IE+ R       G +   ++++EI + + + +VNE  +
Sbjct: 576 QGGIYDYGEDRKPKPNADVQKLIEDYRAEQ----GTQSREISQEEITKRLAYSLVNEGAK 631

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           +LEEGI  RASD+D   + G  FP+YRGG + +A   G   V   L+K+ Q       P+
Sbjct: 632 ILEEGIAQRASDIDVIYIYGYGFPAYRGGPMQYASEQGLKNVAADLEKYGQT------PA 685

Query: 537 RFLEERATKGIPLS 550
             L++ A +G   S
Sbjct: 686 PVLKQLADEGKTFS 699


>gi|449266986|gb|EMC77964.1| Peroxisomal bifunctional enzyme, partial [Columba livia]
          Length = 703

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 198/566 (34%), Positives = 287/566 (50%), Gaps = 34/566 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + I + E  KLGL+D VV  + +    RL    I    +P   SL    KL ++      
Sbjct: 133 RHIPATEALKLGLVDEVVKEDTIEAAIRLANKVIGQPLEPRRLSLRPVPKLPNMEA---F 189

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L  A ++ KK A      + C   +          GV KE ++F  L+    ++ L + F
Sbjct: 190 LSEALVKLKKQARGYLAPELCFQAVRAATELPFADGVRKERELFNVLLTSGQAQALQYAF 249

Query: 126 FAQRATSK--VPN-VTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           FA+RA  K   P+  +     P+ + K AVIG G MG GI T+ +  NI VV  E N EY
Sbjct: 250 FAERAVQKWTTPHGASWQNASPQPIHKAAVIGLGTMGRGIVTSLVKANIPVVALEQNLEY 309

Query: 183 LLKGIKTIEANVRGLVTR---GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           L  G K +   +     +   G  T D  N A   L+  +D+   +DVD+VIEAV E++P
Sbjct: 310 LNTGRKAVMLLLEREAMKMEHGAQTLDFHNPA--RLQFTVDFDALRDVDLVIEAVFENMP 367

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           LK++IF +L   C P   L TNTS ++++ +   TS   ++IG HFFSPAH+M LLEI+ 
Sbjct: 368 LKKEIFQKLSGICKPAAFLCTNTSALNIDEIASATSRPQQVIGTHFFSPAHIMRLLEIIY 427

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              TS   I   + + K++KKV VVVGNC GFA NR  FPY + A  L+  G     +D 
Sbjct: 428 GHHTSPTTIATAVQLAKVLKKVGVVVGNCFGFAGNRMMFPYVEQAVFLLEEGSRPEAVDQ 487

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF-------------QSPLVDLL 406
            +  FG  IGPF++ DLAG  V   + K  D+     S               SPL DLL
Sbjct: 488 VLEDFGFKIGPFRMSDLAGLDVGWRSRK--DRGLTGDSVPPGTPACQRHGHRYSPLPDLL 545

Query: 407 LKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 464
            ++GR G+  GKG Y YEK  G   KPDP +  ++ + R   +I    K   + ++EI+E
Sbjct: 546 CENGRFGQKTGKGWYQYEKAGGRTAKPDPWLHDVLTQYRDTHHI----KTRFIDQEEILE 601

Query: 465 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 524
             LF ++NE   +L E I      LD   + G  +P +RGG +F+A  VG  ++   L+K
Sbjct: 602 RCLFSLINEGFDILAERIASDPEHLDVIYIHGYGWPKHRGGPMFYASTVGLPHILAKLQK 661

Query: 525 WSQLYGNF--FKPSRFLEERATKGIP 548
           +S+ + +    +PS FL++    G P
Sbjct: 662 YSEAHPDVPALRPSTFLKKLVAAGNP 687


>gi|386856885|ref|YP_006261062.1| 3-hydroxyacyl-CoA dehydrogenase [Deinococcus gobiensis I-0]
 gi|380000414|gb|AFD25604.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Deinococcus
           gobiensis I-0]
          Length = 692

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 189/558 (33%), Positives = 284/558 (50%), Gaps = 32/558 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML   S+ + E   LGL+D VV  +      R  A++ A R     R L R    G   
Sbjct: 152 MMLSGSSVKATEARTLGLVDEVVDGD-----LRASAVEFA-RAHADARPLPRISGRGVEG 205

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            + E+   AR    KT          +D+ E         G   EA++F +      SR 
Sbjct: 206 ASPELFAAARAGLGKTHKGQYSPGLIVDLAEMAATKPFAEGWDAEAQLFMQAKDSPQSRA 265

Query: 121 LVHVFFAQRATSKVPNV---TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           L HVFFA+R   KV  +   T +G     VR+V +IG G MG GIA   +   + V + E
Sbjct: 266 LRHVFFAEREAGKVRGLGKDTPVG----DVRRVGIIGAGTMGGGIAMNFLNVGLPVTIVE 321

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
              + L +G+ TI  N      +G+LT D+    + +L   LD     D D++IEAV E+
Sbjct: 322 TAQDALDRGLATIRRNYENSAKKGRLTGDEVEKRMGLLTPTLDMGALADADLIIEAVFEN 381

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ IF+ L+    P  ILA+NTST+++N +   T+  +++IG HFFSPA+VM LLEI
Sbjct: 382 MDVKKDIFTRLDAVAKPGAILASNTSTLNVNEIAAVTARPEQVIGLHFFSPANVMKLLEI 441

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR ++TS  V+   + V + I KV VVVG C GF  NR    Y   AR LV  G D   +
Sbjct: 442 VRADKTSDTVLATSLAVARKIGKVGVVVGVCDGFVGNRMVHRYGDEARKLVEEGADPQAV 501

Query: 358 DSAIRSFGLPIGPFQLLDLA----GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
           D+A+ + GLP+GPF++ D+A    GY +    +KE  +  PD       +D ++++GR G
Sbjct: 502 DAAMHALGLPMGPFEMSDMAGLDIGYAIRQHQAKERGEPKPD-----GWLDRIVETGRKG 556

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           +  G G+Y Y    +P+P+  +  +I + R    +     P  + + EI + + + +VNE
Sbjct: 557 QKTGGGIYDYGDDRRPRPNAEMGQLIADYRAEKGLT----PREIGQDEITKRLAYSLVNE 612

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
             ++LEEGI  RA D+D   + G  FP+YRGG + +A   G   V   L+K+ Q      
Sbjct: 613 GAQILEEGIAQRAGDIDVIYLYGYGFPAYRGGPMGYASEQGLGNVAADLEKYGQ------ 666

Query: 534 KPSRFLEERATKGIPLSA 551
            P+  L   A +G   +A
Sbjct: 667 TPAPLLRRLADEGQTFAA 684


>gi|167822522|ref|ZP_02453993.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 9]
          Length = 476

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 240/461 (52%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +   +      G+  E ++F E +      GLVH FFAQR  +K P  T  G  PR 
Sbjct: 12  VDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRA 69

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           + ++ V+GGG MG+GIA A + +   V + E +   L +G   +E    GLV +G++T  
Sbjct: 70  IERIGVVGGGTMGAGIAVAALDSGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPA 129

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L   KG   Y      D+VIEAV E + +K+ +F+EL +AC P  +LATNTS +D
Sbjct: 130 AQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLD 189

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA++M LLE+V   + SA V+     + + + K+PV  G
Sbjct: 190 IDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAG 249

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  ++  G   ++ID AIR FG P+GP+Q++DLAG  +  AT 
Sbjct: 250 VCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATR 309

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R     + D L + G  G+  G+G Y Y  G++   PDP V  II + R  
Sbjct: 310 KRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAA 369

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             +     P + T++EIV   L  ++NE   V+ E I +R  D+D   + G  FP +RGG
Sbjct: 370 KGV----SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGG 425

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ ++     F+KPS  L +   +G
Sbjct: 426 PMHYADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 466


>gi|343513259|ref|ZP_08750368.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           scophthalmi LMG 19158]
 gi|342793564|gb|EGU29356.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           scophthalmi LMG 19158]
          Length = 704

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 290/553 (52%), Gaps = 22/553 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL+V++ +  D   + K   +   +   +    
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVAPTILLEVAKQFVED---KDKAKHKVSTKEKLMAQTG 224

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P  +A L+VI  G+ HG   G+  EA+ F ELVM + S
Sbjct: 225 FGRKVIFEQAAKKTQQKTRGNYPATEAILEVIRYGLEHGFTKGLAYEAERFGELVMSNES 284

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++        +P  V+++AV+GGGLMG+GI+   +    + V +K+
Sbjct: 285 KALRSIFFA---TTEMKKEHGSDAEPSSVKRIAVLGGGLMGAGISHVTVAKAKVPVRIKD 341

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +            R  L++ +  + ++ L G +D+  F   D+VIEAV E 
Sbjct: 342 VSNDGVLNALNYNFKLFEKQRKRRILSKAQLQSKMQQLSGGIDFISFNHTDVVIEAVFED 401

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E+   P  I ATNTS++ ++ + E+ +  + +IG H+FSP   MPL+E+
Sbjct: 402 LALKQQMVADIEQNAKPDTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + TS Q I  ++ + +   K P+VV +C GF VNR   PY   A  ++  G  + ++
Sbjct: 462 IPHQTTSDQTISTVVELARKQGKTPIVVKDCAGFYVNRILAPYMNEAAHILLTGEPIEQL 521

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKAN 416
           D A+   G P+GP  LLD  G  + A            R FQ P V D LL  GR G+ +
Sbjct: 522 DGALLDAGFPVGPITLLDEVGVDIGAKIMPILVNELGPR-FQGPAVFDTLLNDGRKGRKS 580

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG YTY KG   + D SV        +L N+ P  K   +  +E+    L P++NE+ R
Sbjct: 581 GKGFYTY-KGKDKQVDKSVY-------KLLNLTPESK---MASQEMAMRCLLPMLNEAVR 629

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + +  YG  F P 
Sbjct: 630 CLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGIVKLVEIMNEHAAKYGERFAPC 689

Query: 537 RFLEERATKGIPL 549
             L  RA+   P 
Sbjct: 690 DGLLTRASLNAPF 702


>gi|119713641|gb|ABL97692.1| fatty oxidation complex alpha subunit [uncultured marine bacterium
           EB0_39H12]
          Length = 690

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 171/541 (31%), Positives = 277/541 (51%), Gaps = 16/541 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MM   + + + +   +GL+D +     L   +  +A  I +  KP ++     +K+ S  
Sbjct: 155 MMTSGEHVPANQCHDMGLVDEMADEANLEGDAIQFANRIVSEGKPLVKVRDADEKIKSDK 214

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
               +    R    +        +  +  IE  +      G+  E  +F +L+    S  
Sbjct: 215 GNDALFADFRKSILRKTRGFLAPEYNIQCIEAAVNLPFEEGMKVEQDLFMKLMTGSQSAA 274

Query: 121 LVHVFFAQRATSKVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             ++FFAQR  +K+P++  +  LK  G   V +IG G MG GI+       I V + E +
Sbjct: 275 QRYMFFAQRQVTKIPDIEKETPLKEIG--SVGIIGAGTMGGGISMNFANVGIPVTIIEQS 332

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            E L KGI  I  N      +G++T ++    + ++ G          D++IEAV E++ 
Sbjct: 333 QERLDKGISIIRKNYENTAAKGRITSEQVEERMSLINGQTSIEALNTQDLIIEAVFENMD 392

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           LK+ IF +L+  C    ILA+NTS +D+N + + T+  + +IG HFFSPA+VM LLEIVR
Sbjct: 393 LKKDIFKQLDNICKEGAILASNTSALDVNEIADVTNRPEDVIGLHFFSPANVMKLLEIVR 452

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            ++TS  V+   + V K I+K+  VVG C GF  NR      + A  L+  G   + ID 
Sbjct: 453 GDKTSKSVVASSLAVAKRIQKIAAVVGVCPGFVGNRILAQRQREANKLILEGALPWDIDD 512

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+  FG P+GPF + DLAG  +       ++K   + S    L D+L ++GR G+ +GKG
Sbjct: 513 ALFDFGFPMGPFAMSDLAGLDIG------WNK---ETSNGETLRDVLCEAGRLGQKSGKG 563

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++     PDP V  +I++      I    +   ++++EI+E  L+P++NE  ++LE
Sbjct: 564 FYVYDENRNKSPDPEVEALIKKFGEERQI----QMRDISKEEILERCLYPMINEGFKILE 619

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           EG+ +RASD+D     G  +P Y GG +F+ + VG + V   L+   +  G  FKPS +L
Sbjct: 620 EGMAIRASDIDIVWTNGYGWPVYEGGPMFYGNLVGYDKVLAWLQNAEKELGPEFKPSAYL 679

Query: 540 E 540
           E
Sbjct: 680 E 680


>gi|149377817|ref|ZP_01895548.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
           algicola DG893]
 gi|149357875|gb|EDM46366.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Marinobacter
           algicola DG893]
          Length = 698

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 172/475 (36%), Positives = 268/475 (56%), Gaps = 12/475 (2%)

Query: 77  APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPN 136
           A N P    C++ ++  +      G+  E + F  L+    SR L H FF++R TSK+ +
Sbjct: 225 AKNYPAPLKCVEAVKAAVTMPFDKGMEVEREAFVNLMQTPESRALRHAFFSERLTSKIAD 284

Query: 137 V-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR 195
           V +D  +  R ++ V VIGGG MG+GI+   +   I V L E+  E L +G+  I+    
Sbjct: 285 VPSDTPV--RDIQSVGVIGGGTMGTGISINFLNAGIPVTLVEMKQEGLDRGVAAIQKVYE 342

Query: 196 GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH 255
           G V +G++++D A   + +L   L Y +  +VD+VIEAV E + +KQ +F +L++ C   
Sbjct: 343 GRVKKGRMSEDDAKAKMALLTPSLTYDDLSNVDLVIEAVFEEMGVKQSVFEKLDEVCKQG 402

Query: 256 CILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVG 315
            ILA+NTST+DL+ +   T   + +IG HFFSPA++M LLE+VR E+T+  V+   M + 
Sbjct: 403 AILASNTSTLDLDKIASFTKRPEDVIGLHFFSPANIMKLLEVVRGEKTAKDVLATAMKLA 462

Query: 316 KIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLD 375
           K IKK  VV G C GF  NR    Y + A L++  G  V +ID AI  FG  +GP ++ D
Sbjct: 463 KTIKKTAVVSGVCDGFIGNRMINQYQREALLMLEEGASVQQIDKAIEKFGFAMGPLRMAD 522

Query: 376 LAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPS 434
           LAG  +  A  K   +  PD   +  L D + + GR G+  G G Y YE G++    DP 
Sbjct: 523 LAGGDIGWAIRKRQYQENPD-MVKMVLADRICEMGRYGQKTGAGFYRYEPGNRNALHDPE 581

Query: 435 VLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASV 494
           V  +++E R    I    KP  ++ +EIVE  ++ +VNE  ++L+EGI  RASD+D   +
Sbjct: 582 VDKVVDEVRAELGI----KPRKISNQEIVERCVYALVNEGAQILDEGIAQRASDIDMVYL 637

Query: 495 LGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ---LYGNFFKPSRFLEERATKG 546
            G  FP +RGG + +A+ VG   V  +++ +++       F++P+  L +RA +G
Sbjct: 638 TGYGFPVFRGGPMHYAEEVGLPNVVRAMQAFTEDRHTQPGFWEPAALLAKRAEEG 692


>gi|134279808|ref|ZP_01766520.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 305]
 gi|134249008|gb|EBA49090.1| enoyl-CoA hydratase/isomerase family protein/3-hydroxyacyl-CoA
           dehydrogenase [Burkholderia pseudomallei 305]
          Length = 708

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 175/547 (31%), Positives = 271/547 (49%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D +  S++ L     +  ++ A     +R       L   +
Sbjct: 159 LMLSGRHASAEEALALGLVDRLAHSDDTLAEGLAYVHELLAA-GAGVRRTRDAQGLADRA 217

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   L  AR    + +  +      +D +   +      G+  E ++F E +      G
Sbjct: 218 AAEAALDAARADVARHSRGLFSPARIVDAVAAALAQPFDEGLRTERRLFVECLDSPQRAG 277

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E + 
Sbjct: 278 LVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDD 335

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +
Sbjct: 336 ASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAV 395

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V  
Sbjct: 396 KKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVP 455

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 456 AKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRA 515

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           IR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G 
Sbjct: 516 IREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGY 575

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++    DP V  II + R    +     P + T++EIV   L  ++NE   V+ 
Sbjct: 576 YLYPDGARVGTSDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVH 631

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L
Sbjct: 632 EKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLL 691

Query: 540 EERATKG 546
            +   +G
Sbjct: 692 VDLVARG 698


>gi|358637346|dbj|BAL24643.1| 3-hydroxyacyl-CoA dehydrogenase [Azoarcus sp. KH32C]
          Length = 672

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 171/514 (33%), Positives = 263/514 (51%), Gaps = 21/514 (4%)

Query: 8   ITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA----- 62
           + + +  + G+ID +   + LL+ +   A D+ +   P  R    TDK+  +  A     
Sbjct: 158 VAARQAHEWGVIDRIADGK-LLEDALAMAQDVVSGALPARRLSESTDKIRDVDPALFDEF 216

Query: 63  REVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 122
           R+  K AR    + AP        +D +E         G   E   F+E      SR L+
Sbjct: 217 RK--KNARKWKGQLAP-----WKIVDCVEAACRLSFDEGFRMEKDAFRECEHSHQSRALI 269

Query: 123 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           H+FFA+RA  K+ +VT     P  V  + V+G G MG+GIA +     + V L + + E 
Sbjct: 270 HLFFAERAAGKLSDVT---AAPMPVASIGVVGAGTMGAGIAMSFANAGLPVTLLDTSEEG 326

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L +G+KTI  N    V+RG + Q +A+ AL  +    D +   + D+++EAV E + +KQ
Sbjct: 327 LARGMKTITGNYATSVSRGSMPQARADAALARITATTDDAALAEADLIVEAVFEDMAIKQ 386

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
            +F  L+    P  ILATNTST+D++ +   TS  + ++G HFFSPA+VM LLE+VR  R
Sbjct: 387 SVFRRLDAVAKPGAILATNTSTLDVDAIAAVTSRPESVLGLHFFSPANVMRLLEVVRGPR 446

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           T A  +   M V + ++K+ VV GN  GF  NR    Y + A  L+  G   ++ID  + 
Sbjct: 447 TGAATLATAMAVARKLRKIAVVSGNAYGFIGNRILAAYGREADFLLEEGATPWQIDRVLT 506

Query: 363 SFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 422
            FG P+G F + D+AG  V     ++ +   P     SP+ D + + GR G+  G+G Y 
Sbjct: 507 EFGFPMGLFAMRDMAGLDVIWRIRQQENLTRPADERYSPIADRICEMGRFGQKTGRGYYL 566

Query: 423 YEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
           Y+ G  P PDP +  +I        I     P    + EI++ +L  + NE   +LEEG+
Sbjct: 567 YD-GRTPIPDPEIENLIVGVSAELGIARRDIP----DAEILQRLLSAMANEGAHILEEGV 621

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
            +RA D+D   V G  FP+ RGG ++WA  VG +
Sbjct: 622 ALRAGDIDVVYVNGYGFPATRGGPMWWAREVGPD 655


>gi|293605889|ref|ZP_06688259.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Achromobacter piechaudii ATCC 43553]
 gi|292815676|gb|EFF74787.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Achromobacter piechaudii ATCC 43553]
          Length = 707

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 184/551 (33%), Positives = 285/551 (51%), Gaps = 15/551 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K +++E   K GL+D +   ++ L     +   + A+     RS   +  L   +
Sbjct: 157 LMLTGKHLSAEAALKAGLVDTLAEGDDPLAAGLAYTRQLLAQGAGPRRSRDASAALADKA 216

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A      A  +  +T   +      ++ +   I      G+  E  +F + +      G
Sbjct: 217 AALAEAAAAGERVSQTLRGLYSPAKIVEAVRAAIEQPFDEGLRTERALFLQCLNSPQRAG 276

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R T+KVP + +   KPR + KV V+GGG MG+GIA A +   + VV+ E + 
Sbjct: 277 LVHAFFAERETAKVPELKEA--KPRRLDKVGVVGGGTMGAGIAVAMLDAGLPVVMIEQDE 334

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +      LV  G+L+    +  L  L G   Y    D D+++EAV E + +
Sbjct: 335 PALERGRARVAQVYDRLVKNGRLSAQDRDARLARLTGATSYDALDDADLIVEAVFEDMDV 394

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K  +F++L++   P  +LATNTS +D+N +   T     ++G HFFSPA++M LLEIV  
Sbjct: 395 KLGVFAQLDRVAKPGAVLATNTSYLDVNRIASATRGPADVLGLHFFSPANIMKLLEIVVG 454

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E T+A  +     + + ++K PV  G C GF  NR    Y Q+A +++  G   + ID+A
Sbjct: 455 EHTAADTVATGFELARRLRKTPVRAGVCDGFIGNRILAAYRQAADMMMEDGASPYDIDAA 514

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKE----FDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
            R FG P+GP+Q++DLAG  +  AT K      D A   R+ Q P  D L + G  G+  
Sbjct: 515 AREFGYPMGPYQMVDLAGGDIGWATRKRRAATRDPAL--RTVQIP--DRLCERGWFGQKT 570

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           G+G Y Y  G++   PDP VL II+E RR + I     P + T ++I+   L  ++NE+ 
Sbjct: 571 GRGFYLYPDGARVGTPDPEVLAIIDEERRRAGIT----PRAFTHEDILRRYLAAMINEAA 626

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
            VL EGI +R SD+D   + G  FP YRGG + +AD+VG   V   ++ +++    F+KP
Sbjct: 627 NVLHEGIALRPSDVDVVFLSGYGFPRYRGGPMHYADSVGLAQVLADIRAYAKEDPAFWKP 686

Query: 536 SRFLEERATKG 546
           S  L   A  G
Sbjct: 687 SPLLVRLAESG 697


>gi|167892607|ref|ZP_02480009.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 7894]
          Length = 478

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 239/461 (51%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +   +      G+  E ++F E +      GLVH FFAQR  +K P  T  G  PR 
Sbjct: 14  VDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRA 71

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           + ++ V+GGG MG+GIA A +     V + E +   L +G   +E    GLV +G++T  
Sbjct: 72  IERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPA 131

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L   KG   Y      D+VIEAV E + +K+ +F+EL +AC P  +LATNTS +D
Sbjct: 132 AQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLD 191

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA++M LLE+V   + SA V+     + + + K+PV  G
Sbjct: 192 IDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAG 251

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  ++  G   ++ID AIR FG P+GP+Q++DLAG  +  AT 
Sbjct: 252 VCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATR 311

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R     + D L + G  G+  G+G Y Y  G++   PDP V  II + R  
Sbjct: 312 KRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAA 371

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             +     P + T++EIV   L  ++NE   V+ E I +R  D+D   + G  FP +RGG
Sbjct: 372 KGV----SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGG 427

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ ++     F+KPS  L +   +G
Sbjct: 428 PMHYADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 468


>gi|167844104|ref|ZP_02469612.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei B7210]
          Length = 474

 Score =  271 bits (693), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 239/461 (51%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +   +      G+  E ++F E +      GLVH FFAQR  +K P  T  G  PR 
Sbjct: 10  VDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRA 67

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           + ++ V+GGG MG+GIA A +     V + E +   L +G   +E    GLV +G++T  
Sbjct: 68  IERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPA 127

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L   KG   Y      D+VIEAV E + +K+ +F+EL +AC P  +LATNTS +D
Sbjct: 128 AQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLD 187

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA++M LLE+V   + SA V+     + + + K+PV  G
Sbjct: 188 IDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAG 247

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  ++  G   ++ID AIR FG P+GP+Q++DLAG  +  AT 
Sbjct: 248 VCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATR 307

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R     + D L + G  G+  G+G Y Y  G++   PDP V  II + R  
Sbjct: 308 KRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAA 367

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             +     P + T++EIV   L  ++NE   V+ E I +R  D+D   + G  FP +RGG
Sbjct: 368 KGV----SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGG 423

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ ++     F+KPS  L +   +G
Sbjct: 424 PMHYADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 464


>gi|167901102|ref|ZP_02488307.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei NCTC 13177]
          Length = 495

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 239/461 (51%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +   +      G+  E ++F E +      GLVH FFAQR  +K P  T  G  PR 
Sbjct: 31  VDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRA 88

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           + ++ V+GGG MG+GIA A +     V + E +   L +G   +E    GLV +G++T  
Sbjct: 89  IERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPA 148

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L   KG   Y      D+VIEAV E + +K+ +F+EL +AC P  +LATNTS +D
Sbjct: 149 AQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLD 208

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA++M LLE+V   + SA V+     + + + K+PV  G
Sbjct: 209 IDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAG 268

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  ++  G   ++ID AIR FG P+GP+Q++DLAG  +  AT 
Sbjct: 269 VCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATR 328

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R     + D L + G  G+  G+G Y Y  G++   PDP V  II + R  
Sbjct: 329 KRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAA 388

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             +     P + T++EIV   L  ++NE   V+ E I +R  D+D   + G  FP +RGG
Sbjct: 389 KGV----SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGG 444

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ ++     F+KPS  L +   +G
Sbjct: 445 PMHYADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 485


>gi|167736895|ref|ZP_02409669.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 14]
          Length = 490

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 239/461 (51%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +   +      G+  E ++F E +      GLVH FFAQR  +K P  T  G  PR 
Sbjct: 26  VDAVAAALAQPFDEGLRTERRLFVECLDSPQRAGLVHAFFAQREAAKSPE-TRRG-APRA 83

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           + ++ V+GGG MG+GIA A +     V + E +   L +G   +E    GLV +G++T  
Sbjct: 84  IERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLERGRAHVEKVYAGLVAKGRMTPA 143

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L   KG   Y      D+VIEAV E + +K+ +F+EL +AC P  +LATNTS +D
Sbjct: 144 AQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAVFAELARACKPGAVLATNTSYLD 203

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA++M LLE+V   + SA V+     + + + K+PV  G
Sbjct: 204 IDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVSADVVATAFELARKLGKIPVRAG 263

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  ++  G   ++ID AIR FG P+GP+Q++DLAG  +  AT 
Sbjct: 264 VCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREFGFPMGPYQVVDLAGGDIGWATR 323

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R     + D L + G  G+  G+G Y Y  G++   PDP V  II + R  
Sbjct: 324 KRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYPDGARVGTPDPEVEAIIAQARAA 383

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             +     P + T++EIV   L  ++NE   V+ E I +R  D+D   + G  FP +RGG
Sbjct: 384 KGV----SPRAFTDEEIVRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHRGG 439

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ ++     F+KPS  L +   +G
Sbjct: 440 PMHYADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLVARG 480


>gi|374371761|ref|ZP_09629692.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Cupriavidus basilensis OR16]
 gi|373096705|gb|EHP37895.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Cupriavidus basilensis OR16]
          Length = 602

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 178/533 (33%), Positives = 263/533 (49%), Gaps = 13/533 (2%)

Query: 16  LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA-K 74
           LG+ DA++  E L            A R   +   H        ++A  V   AR+ A  
Sbjct: 76  LGMADALIGGEPLAAAVAF------AERVAGLPGTHPVIARKPCADAAGVDFAARIAAVS 129

Query: 75  KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134
             A N    +A +  +E        +G+  E   F +LV    S+ L H+FFA+R   KV
Sbjct: 130 AKARNALAQRAAIACVEAATRLPIDAGLDAERGHFDQLVAGTESKALRHLFFAEREAPKV 189

Query: 135 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 194
             +   G   R V +V ++G G MG+GIA A     I V L E     L +G+  I  N 
Sbjct: 190 AALP-AGASLRTVARVGILGAGTMGAGIAMAFANAGIQVTLLEQQQAALDRGLAMIRRNY 248

Query: 195 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 254
                +GKLT       +  +   L  +   D D+VIEAV E + +K+ +F+ L   C P
Sbjct: 249 EITAAKGKLTAQGIAQRMACITPTLAEAALADADLVIEAVFEDMAVKEAVFARLGALCKP 308

Query: 255 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 314
             ILATNTS + ++++   TS    +IG HFFSPA+VM LLE+V+ ERT+ +V    M +
Sbjct: 309 GAILATNTSRLSIDVIAASTSRPQDVIGLHFFSPANVMKLLEVVQGERTAPEVTATCMKM 368

Query: 315 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 374
            + I K+PV+V  C GF  NR   PY + A  L+  G    ++D A+  FG+ +GP  + 
Sbjct: 369 AQAIGKIPVLVRVCEGFVGNRMLTPYWREAGFLLEEGASPQQVDGALTRFGMAMGPLAMA 428

Query: 375 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDP 433
           DLAG  +  AT K      P     S + D + + GR G+    G Y YE G + P PDP
Sbjct: 429 DLAGMDINWATRKRLAPTRPAHLRYSKVADRICEQGRFGQKTNAGYYRYEAGGRSPLPDP 488

Query: 434 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 493
           +V  +I  C   + I    +   V+++EIVE  +  +VNE  R+LEEGI  RASD+D   
Sbjct: 489 AVDALIRACAAEAGI----ERRDVSDEEIVERCMLALVNEGARILEEGIAQRASDIDVVY 544

Query: 494 VLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           V G  FP++RGG +F A+ +G       ++    ++G  + P+  L     +G
Sbjct: 545 VHGYGFPAWRGGPMFHAETIGLGCTLDKIRALHAIHGEHWAPAPLLVRLVAQG 597


>gi|87310775|ref|ZP_01092902.1| fatty oxidation complex, alpha subunit FadB [Blastopirellula marina
           DSM 3645]
 gi|87286532|gb|EAQ78439.1| fatty oxidation complex, alpha subunit FadB [Blastopirellula marina
           DSM 3645]
          Length = 724

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 164/550 (29%), Positives = 274/550 (49%), Gaps = 13/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   +S+++    K+GL D   + ++L+  + +  ++     K +++          +S
Sbjct: 169 MITGGESVSAANAAKMGLADDFTSPDDLVAAA-IRMIEQDQESKSYLQDREVRSAAIEMS 227

Query: 61  EAREVLKLARLQA---KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           E       A   A    +T    P   A L+ +  G +    S +  EA+    L     
Sbjct: 228 ETELGFLGATASAYIQGQTKGQYPAPMAALETLLGGAMVDAESALTMEAEGLAGLFGTPV 287

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           +  L++VFF      K   V    ++   +  V+VIG G+MG+GIA A I   I   L +
Sbjct: 288 NAALMNVFFLTDRNKKDDGVDQDDVEKTKIESVSVIGAGIMGAGIAAASIRRGILTTLSD 347

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            N+E L +G+  +          GK T  KA     ML   +  SE     +VIEA++E+
Sbjct: 348 ANAEALRRGVAGVLEEAAYDRDAGKKTIAKAVEGAAMLNASISDSEVAASKLVIEAIVEN 407

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+KI++ LE       ILA+NTST+ +  +    +  +R +G HFF+P   M L+E+
Sbjct: 408 LEVKRKIYARLEPQLADDAILASNTSTLPITQLAANLAKPERFVGIHFFNPVRKMKLVEV 467

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R  +TS   +   +   K + K P+VV +  GF VNR  FPY   A  L+  GV + R+
Sbjct: 468 IRGAQTSDATVASAVAFAKRLGKFPIVVNDGPGFLVNRLLFPYMNEALALLQEGVSMERV 527

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D   + FG+P+GP  L D+ G   A    +    AFPDR+  SP++  L+K+GR G+ +G
Sbjct: 528 DKCAKKFGMPLGPITLYDMVGIDTAFYAGRTMYDAFPDRTLASPILPALVKAGRLGQKSG 587

Query: 418 KGLYTYE-KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
            G Y+YE +  + +PDP+    I+   +       G P   T+ ++++ +  P++ E+ R
Sbjct: 588 LGFYSYENRKRRAQPDPAAAKYIDPYIK-------GMPRDETDAQVIDRLFLPMLLEATR 640

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            +E  IV    D+D   + G+ FP ++GG++FWAD +GA  +   LK W + +G  +KP+
Sbjct: 641 AMEANIVRDVRDIDLGLIFGLGFPPFKGGLMFWADTIGAKQLVERLKPWEE-FGVRYKPT 699

Query: 537 RFLEERATKG 546
             L E A  G
Sbjct: 700 ELLLEMAKSG 709


>gi|393725326|ref|ZP_10345253.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26605]
          Length = 677

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 177/534 (33%), Positives = 272/534 (50%), Gaps = 33/534 (6%)

Query: 17  GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK- 75
           GLID +   + L   +  +A +IA  R P  R+  +     + ++   V    +  AK+ 
Sbjct: 168 GLIDRLAGEDSLEADAIAFAREIADAR-PLPRAREKV----AQADPEAVAAFKKDNAKRF 222

Query: 76  ---TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132
               AP    + AC++   +G       G+  E + F +L+M   S    H+FFA+R  +
Sbjct: 223 RGFDAP--AANIACVEKAADGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAA 278

Query: 133 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 192
           K+  + D  ++ R +++V VIG G MG GI+   +   I V + E+  E L +G  TI  
Sbjct: 279 KIDGI-DANIQLREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAGTIRK 337

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
           N      +G+L  ++   A+  L   LD+    + D++IEAV E++ +K+ IF+ L+   
Sbjct: 338 NYEASAAKGRLKSEQVEAAMGALNPTLDFEALAECDLIIEAVYENMEVKKDIFTRLDAIA 397

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
            P  ILA+NTS +D++ +   T     ++G HFFSPA+VM LLE+VR  +T   V+  +M
Sbjct: 398 KPGAILASNTSYLDIDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTDDDVLATVM 457

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            + K IKKV VV G C GF  NR   P    A  L+  G    +ID    +FG+P+GPFQ
Sbjct: 458 ALSKTIKKVAVVAGVCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDRVHVAFGMPMGPFQ 517

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 432
           + DLAG  +            P+R     + D L   GR G+   KG Y Y++   P P 
Sbjct: 518 MSDLAGVDIGWHRD-------PNRI--ENIRDALAAEGRWGQKTAKGFYDYDEKRNPTPS 568

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
           P V  IIE+ R  SN+    +   ++++EIVE  L+ +VNE   +LEE +  RASD+D  
Sbjct: 569 PRVAEIIEDFRSKSNM----QKREISDQEIVEKTLYTMVNEGALILEEKMAQRASDIDVV 624

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + G  +P YRGG +FWAD  G   +   L+K        F  +  L+ +A  G
Sbjct: 625 WIYGYGWPVYRGGPMFWADTEGLKTIVAGLEKHG------FAVAELLKSKAESG 672


>gi|404253295|ref|ZP_10957263.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26621]
          Length = 681

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 158/446 (35%), Positives = 237/446 (53%), Gaps = 20/446 (4%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+  E + F +L+M   S    H+FFA+R  +K+  + D  +  R +++V VIG G MG 
Sbjct: 251 GIAFERQEFMKLMMGVQSAAQRHIFFAERQAAKIDGI-DPKIPLREIKRVGVIGAGTMGG 309

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI+   +   I V + E+  E L +G  TI  N      +G+L  ++   A+  L   LD
Sbjct: 310 GISMNFLSAGIPVTIVEMAQEALDRGAGTIRKNYEASAAKGRLKPEQVEQAMGALTPTLD 369

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           +    D D++IEAV E++ +K++IF+ L+    P  ILA+NTS +D++ +   T     +
Sbjct: 370 FDALADCDLIIEAVYENMDVKKEIFTRLDAIAKPGAILASNTSYLDIDEIASVTKRPGDV 429

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G HFFSPA+VM LLE+VR  +T   V+  +M + K I+KV VV G C GF  NR   P 
Sbjct: 430 VGMHFFSPANVMKLLEVVRGAQTEDDVLATVMALSKTIRKVAVVAGVCDGFIGNRMLKPR 489

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
              A  L+  G    +ID    +FG+P+GPFQ+ DLAG  +             D +   
Sbjct: 490 QVEAMKLLMEGATPEQIDKVHVAFGMPMGPFQMSDLAGVDIGWHR---------DPTRIE 540

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
            + D L   GR G+  GKG Y Y++   P P P V  IIE+ R  SN+    +   ++++
Sbjct: 541 NIRDALAAEGRWGQKTGKGFYDYDEKRTPTPSPRVAEIIEDFRSKSNL----QKREISDQ 596

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EIVE  L+ +VNE   +LEE +  RASD+D   + G  +P YRGG +FWAD  G   +  
Sbjct: 597 EIVEKTLYTMVNEGALILEEKMAQRASDIDVVWIYGYGWPVYRGGPMFWADTEGLKTIVA 656

Query: 521 SLKKWSQLYGNFFKPSRFLEERATKG 546
            L+K        F  +  L+ +A  G
Sbjct: 657 GLEKHG------FAVAELLKSKAESG 676


>gi|170703604|ref|ZP_02894348.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria IOP40-10]
 gi|170131485|gb|EDT00069.1| 3-hydroxybutyryl-CoA epimerase [Burkholderia ambifaria IOP40-10]
          Length = 511

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/461 (34%), Positives = 236/461 (51%), Gaps = 7/461 (1%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +E  +     +G+  E  +F + +      GLVH FFA+R  +K P       +P  
Sbjct: 47  VDAVEAALTQSFDAGMKLERSLFLQCIDSPQRAGLVHAFFAEREAAKAPEARRASARP-- 104

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           V ++ V+GGG MG+GIA A +   + V + E +   L +G   +E    GLV +G++T  
Sbjct: 105 VERIGVVGGGTMGAGIAVAALDAGLPVTMIERDEASLARGRAHVEKVYDGLVAKGRMTPA 164

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L   KG   Y      D+VIEAV E + +K+ +F+EL + C    +LATNTS +D
Sbjct: 165 AHAARLARFKGSTSYDALAQADVVIEAVFEDMAVKKAVFAELARVCKAGAVLATNTSYLD 224

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +         +IG HFFSPA+VM LLEIV   R  A+V+     + K +KK PV  G
Sbjct: 225 IDELAASIDRPADVIGLHFFSPANVMKLLEIVVPARVGAEVVATAFALAKQLKKTPVRAG 284

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  L+  G   ++ID A+R FG P+GPFQ++DLAG  +  AT 
Sbjct: 285 VCDGFIGNRILAVYRTAADYLMEDGASPYQIDRAVREFGFPMGPFQVVDLAGGDIGWATR 344

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRL 445
           K        R+    + D L + G  G+   +G Y Y  G++   PDP V  I+ + R  
Sbjct: 345 KRRAATRDPRARYVEISDRLCERGWFGQKTARGYYLYPDGARVGTPDPEVEAIVADERAK 404

Query: 446 SNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGG 505
             I P     + ++ EI+   L  ++NE   V+ E I +R  D+D   + G  FP YRGG
Sbjct: 405 KRIAPR----AFSDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRYRGG 460

Query: 506 IVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + +AD VG   V   ++ ++     F+KPS  + E   +G
Sbjct: 461 PMHYADTVGLANVLADIRAFANEDPLFWKPSPLIVELVERG 501


>gi|196001669|ref|XP_002110702.1| hypothetical protein TRIADDRAFT_63801 [Trichoplax adhaerens]
 gi|190586653|gb|EDV26706.1| hypothetical protein TRIADDRAFT_63801 [Trichoplax adhaerens]
          Length = 689

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/487 (33%), Positives = 265/487 (54%), Gaps = 38/487 (7%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIGLKPRGVRKVAVIGGGLM 158
           G+ KE +  K L+    +R L + FFAQR+  K  +  V    +KP  V+ V +IG G M
Sbjct: 207 GMKKEEQSMKVLMASYQARALQYSFFAQRSAPKWSLSGVNSKNVKPIPVKTVGIIGAGTM 266

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G+GIA A + +   VVL EV  EYL +G+K I++ +   V RG++T+ +A     ++K  
Sbjct: 267 GTGIAIALMTSKYRVVLLEVKKEYLDRGMKMIQSTLERNVKRGRMTKQQAKACSALVKPT 326

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC----------PPHCILATNTSTIDLN 268
           L Y +  DVD VIEAV E++ +K+++F +L K C            + IL +NTS +D++
Sbjct: 327 LAYKDLSDVDFVIEAVFEALEIKKEVFRKLVKHCKVDIDANKFLQSNAILCSNTSYLDID 386

Query: 269 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 328
            +     S D+++G HFF+PA++M L+E ++  +TSA+ I  +M +   +KK+PV+VGNC
Sbjct: 387 KIASVVPSPDKVMGMHFFAPANIMKLVECIKGTKTSAETIATVMNLSLRMKKIPVLVGNC 446

Query: 329 TGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE 388
            GF  NR   PY++ A  +V  G    +ID  +  +G+P+GP ++ DL+G  +       
Sbjct: 447 DGFVANRMLAPYAKEATFMVEEGALPHQIDDTLYDYGMPMGPLRVGDLSGLDIGYRDRVG 506

Query: 389 FDKAFPDR-SFQSPLV----------DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLP 437
                P+   F++PL+          D+L  +GR G+  GKG Y YEKG K   DP V  
Sbjct: 507 KGLTGPNAPKFENPLLRQGQRYSLLGDILHDTGRLGQKTGKGWYKYEKG-KAVVDPLVTE 565

Query: 438 IIEE-CRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 496
           +IE+ C        G    ++T  EIVE       NE  ++LEEGI ++ SD+D     G
Sbjct: 566 MIEKYCNEY-----GFSRRNITNAEIVERCFLSAANEGFKILEEGIALKPSDIDVIWQFG 620

Query: 497 MSFPSYRGGIVFW-ADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIPLSA-- 551
             FP ++GG +F+ ++ +G    Y  ++ + + + +  +++PS  L++       +S   
Sbjct: 621 FGFPRHKGGPMFYVSNMIGLEKAYEKIQTYWEKHRDCRYWQPSNLLKQLVANKADISQFQ 680

Query: 552 ---PVSS 555
              PVSS
Sbjct: 681 KFLPVSS 687


>gi|420248747|ref|ZP_14752051.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Burkholderia sp. BT03]
 gi|398066816|gb|EJL58366.1| 3-hydroxyacyl-CoA dehydrogenase, partial [Burkholderia sp. BT03]
          Length = 489

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 163/468 (34%), Positives = 244/468 (52%), Gaps = 11/468 (2%)

Query: 87  LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRG 146
           +D +E  +      G+  E K F E V       LVH F A+R   K P       +PR 
Sbjct: 26  VDCVEAALNLPFDEGLRFERKQFLECVDSPQRAALVHAFQAEREVQKAPETR--SAQPRP 83

Query: 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           +    V+GGG MG+GIA A +   + V + E + E L +G   IE    GL+ +G+LT +
Sbjct: 84  IASAGVVGGGTMGAGIAVALLDAGLPVTMIERDDESLARGRAHIEKVYDGLIAKGRLTSE 143

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
                L    G   Y    DVD+VIEAV E + +KQ +F+EL++ C    +LATNTS +D
Sbjct: 144 AKAKKLARFIGSTSYEALADVDIVIEAVFEDMAVKQAVFAELDRVCKQGAVLATNTSYLD 203

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           ++ +    S    +IG HFFSPAH+M LLE+V     SA V+     + K ++KVPV  G
Sbjct: 204 IDAIAASMSRLQDVIGLHFFSPAHIMKLLEVVVPAHVSADVVATSFDLAKKLRKVPVRAG 263

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
            C GF  NR    Y  +A  L+  G   ++ID A+R FG P+GP+Q++DLAG  +  AT 
Sbjct: 264 VCDGFIGNRMLAVYRAAADHLMEDGASPYQIDKAVREFGFPMGPYQVIDLAGGDIGWATR 323

Query: 387 KEFDKAF-PD-RSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECR 443
           K       PD R  Q P  D L + G  G+   +G Y Y++G +   PD  V  II   R
Sbjct: 324 KRRAATRNPDARYVQIP--DRLCERGWFGQKTKRGFYRYDEGKRAGTPDAEVEAIIVAER 381

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
             + + P     + ++++IV   +  ++NE   V+ E I +R  D+D   + G  FP+YR
Sbjct: 382 ERAGVTPR----TFSDEQIVRRYMAAMINEGANVIHERIALRPLDVDVTLINGFGFPAYR 437

Query: 504 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 551
           GG + +AD +G   +   ++++ +    F+KPS  L E   +G  L++
Sbjct: 438 GGPMHYADTIGLPALLADIREFEKQDPLFWKPSPLLVELVERGETLAS 485


>gi|398844584|ref|ZP_10601644.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
 gi|398254406|gb|EJN39503.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas sp. GM84]
          Length = 703

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 185/558 (33%), Positives = 285/558 (51%), Gaps = 27/558 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 59
           ++L    + SE   +LG++D V   ++ LL  +  +A ++   R      +   D  G L
Sbjct: 154 LILAGTPVNSETALRLGILDRVAKHADALLDEACAFARELLGDRAAARPDVPYPDPAGGL 213

Query: 60  SEA--REVLKLARLQAK-KTAPNM---PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 113
            +      L+    + K + AP +       AC   + EG+ H        E  +FK+  
Sbjct: 214 PDDFFEHFLEANAPRWKSRLAPRLVLDALQAACRWPLTEGLAH--------EQVLFKQAE 265

Query: 114 MLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY 172
               S  L HVFFA+R  +KVP +  D+ L+P  + KVAVIG G MG GIA       I 
Sbjct: 266 DSRQSAALRHVFFAEREAAKVPWIEADLPLRP--ICKVAVIGAGTMGGGIAMNFANAGIP 323

Query: 173 VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
           V+L E   + L +GI  I  N    V RGKL  ++      ++ G LDY++ +DVD+VIE
Sbjct: 324 VILLERQQDALDRGIAQINRNYANSVKRGKLAPEQLEQRTTLISGTLDYADLRDVDLVIE 383

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + +KQ++F  L++ C P  ILATNTS++D++ +   TS    +IG HFFSPA+VM
Sbjct: 384 AVFEKLEIKQEVFRTLDEVCKPGAILATNTSSLDVDRIAAVTSRPHDVIGLHFFSPANVM 443

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLE+V   +T+A V+   + +G+ I K+PVV G C GF  NR   PY++ A  LV  G 
Sbjct: 444 RLLEVVNGRQTAADVLATTLKLGRTIGKLPVVSGVCFGFIGNRMLEPYAREAHRLVLEGA 503

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
              ++D+ +    L +G   +LDLAG  V          A         L D L   GR 
Sbjct: 504 SPAQVDNVLTGLDLNMGVLSMLDLAGIDVNFLVRDANRTAINHDDSYCRLGDELYALGRY 563

Query: 413 GKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           G+  G+G Y Y+   + + D  V+ + E  R    +    +PI    +EI +  LF ++N
Sbjct: 564 GQKTGRGFYLYDDRER-QEDYEVIALAE--RLAGELHIPRRPIDA--QEIHDRCLFMLIN 618

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E  ++L+EGI +RASD+D   + G  FP++ GG + +A+ +G + V   ++ + Q  G +
Sbjct: 619 EGIQLLDEGIALRASDIDLVWINGYGFPAHLGGPMHYAEQLGLDKVLRGIEHYRQTLGAY 678

Query: 533 ----FKPSRFLEERATKG 546
               F+P+  L      G
Sbjct: 679 GEMWFQPAPLLARLVAAG 696


>gi|227823146|ref|YP_002827118.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Sinorhizobium fredii NGR234]
 gi|227342147|gb|ACP26365.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Sinorhizobium fredii NGR234]
          Length = 710

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 168/455 (36%), Positives = 241/455 (52%), Gaps = 38/455 (8%)

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E + F  L     +  L HVFFA+RA ++ P +   G+ PR +   AVIGGG MG+GIA 
Sbjct: 272 ERETFLALRGSAQAAALRHVFFAERAATRPPELA--GVIPRTIGSAAVIGGGTMGAGIAA 329

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
           A     + VVL E +   + +G+  + A   G   RG+++ D A   +  + G  DY+  
Sbjct: 330 ALRDAGLPVVLVERDDGAVERGLANLRAIFDGAAKRGRMSADAAAERMAGVIGTTDYAAL 389

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
            D+D+V+EAV E + +K+++F  L  AC    +LATNTS +D   + E  S  DR +G H
Sbjct: 390 ADIDLVVEAVFEDLDVKREVFRRLAAACRAEAVLATNTSYLDPERIAEGISRPDRFLGLH 449

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF-FPYSQS 343
           FFSPA VM LLEIV T+ TS  VI     + +I+ K+PV  G C GF  NR       Q+
Sbjct: 450 FFSPAQVMKLLEIVPTKATSPDVIAAGFALARILNKIPVRAGICDGFIGNRILKVTRVQA 509

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
            RLL+S G     +D+A+R+FGLP+GPF+  DL G  +AA   K   +A  ++SF +P+ 
Sbjct: 510 ERLLLS-GATPAAVDAAMRAFGLPMGPFEAQDLGGLDIAAFQRKAA-RARGEKSF-APIA 566

Query: 404 DLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEE-----CRRLSNIMPGGKPISV 457
           D L  + R G+ +G G Y YE G + P+P   V  II E      RR             
Sbjct: 567 DRLCAARRFGQKSGGGWYDYEPGDRTPRPSDVVAAIIAEEAKSWLRR-----------DW 615

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
            +  IV+ IL+P+VNE  R+L +G  +R SD+D   + G  FP +RGG + +A A G + 
Sbjct: 616 HDDSIVDCILWPMVNEGARILADGTALRVSDIDLVKIHGYGFPRWRGGPMHYAQAYGLDK 675

Query: 518 VYTSLKKWSQ---------------LYGNFFKPSR 537
           V  +L   +                 +G F  PSR
Sbjct: 676 VVDALDALASEGLADPPCDLLIAAARHGGFADPSR 710


>gi|260797707|ref|XP_002593843.1| hypothetical protein BRAFLDRAFT_214740 [Branchiostoma floridae]
 gi|229279073|gb|EEN49854.1| hypothetical protein BRAFLDRAFT_214740 [Branchiostoma floridae]
          Length = 586

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 182/572 (31%), Positives = 286/572 (50%), Gaps = 46/572 (8%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + I +++   LGL+D +V    LLK +  +A  I  R                  
Sbjct: 33  MITSGQHINAKQALSLGLVDKIVQGN-LLKEAIRFAQSIEGR------------------ 73

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              EV++ AR    + A        C+  I   ++     G+ +E ++   L+    +  
Sbjct: 74  PVEEVVEAARKTILRRARGAIAPMTCVQAIRASVLPFDL-GMQRERELMTFLMTSWQAPA 132

Query: 121 LVHVFFAQRATSKVPNVTDIGL-----KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
             + FF++R   +  +  D  +     KPR ++ V V+G G MG GI  + +   + VVL
Sbjct: 133 QQYAFFSEREVRRWSHPRDKRVNFKTAKPRVIKSVGVVGAGTMGVGITISLLQAGLKVVL 192

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            EVN + L KG          ++ +  L+Q  A+  +  L   +DYS+  DVDMVIEAV 
Sbjct: 193 LEVNKKQLDKGQNCSLPTAITMIQK-TLSQKSASQRMSQLITTMDYSQLSDVDMVIEAVF 251

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           ES+ LK+++F +L+    P  ILA+NTS +D++ +   T   D+++G HFFSPA+VM LL
Sbjct: 252 ESLKLKKEVFKKLDAITKPQAILASNTSGLDIDKIAAVTKRPDKVVGTHFFSPANVMRLL 311

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E +  + TS + I   M +G  I KV V+VGNC+GF  NR   PY   +  L+  G++  
Sbjct: 312 ENIYGKHTSPETIATAMQLGVTIGKVGVLVGNCSGFVGNRMLGPYRAESLFLLEEGLEPQ 371

Query: 356 RIDSAIRSFGLPIGPFQLLDLAG----------YGVAAATSKEFDKA--FPDRSFQSPLV 403
            +D AI  FG P+GPF++ DLAG           G+        D    +   +   PL 
Sbjct: 372 DVDKAIEEFGFPMGPFRMSDLAGGDIGWRGRIEKGLTTEQGPPPDTPPLYRHGNRYCPLP 431

Query: 404 DLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           D+L   GR G+  G G Y YE GS+   PDP V  +I E R+      G K  +++ +EI
Sbjct: 432 DMLCMKGRLGQKTGAGWYRYEPGSRAALPDPVVTQMIHEYRQEH----GFKKRNISSQEI 487

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD-AVGANYVYTS 521
           VE  L+P++NE   +L+EGI  R+ D+D   + G  +P + GG +++A+  VG   +  S
Sbjct: 488 VERCLYPLINEGFHILDEGIAARSMDIDVIYLFGYGWPRHTGGPMYYAERVVGLERILRS 547

Query: 522 LKKWSQLY--GNFFKPSRFLEERATKGIPLSA 551
           L+ +   Y   +  +PS  L +   KG  L+A
Sbjct: 548 LETYQARYPDHHLLQPSPLLRDMVAKGTSLAA 579


>gi|372282089|ref|ZP_09518125.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding, partial [Oceanicola
           sp. S124]
          Length = 667

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 157/443 (35%), Positives = 237/443 (53%), Gaps = 16/443 (3%)

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E  +F+ L     S  + H+FFA+R  +++P+    G   R + + AVIG G MG GIA 
Sbjct: 224 EQALFQRLREGPQSAAMRHLFFAERTAARLPDGL-TGTAGR-ITRAAVIGAGTMGGGIAM 281

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
                 + V L + ++E L  G+  I  N    V RG+L+  +A   +  +         
Sbjct: 282 CFADAGLPVTLIDKSAEGLAAGLDRIRKNYDISVKRGRLSPSEAEARMARITPAQTLEAA 341

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
           +D D+VIEAV E + LKQ++F +L+    P  +LATNTS++D++ +   T    R++G H
Sbjct: 342 QDADLVIEAVFEDMALKQQLFRDLDALLAPGAVLATNTSSLDIDEMAAATGRPQRVVGLH 401

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSA 344
           FFSPA+VM LLE+VR  +T A  +   + +   + K  V+VGNC GF  NR        A
Sbjct: 402 FFSPANVMTLLEVVRGAKTDADTLATALALAATLGKQAVIVGNCPGFVGNRILRQRHHQA 461

Query: 345 RLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVD 404
             L+  G     +D  I +FG+ +GPFQ+ DLAG  VA    +        + +  P+ D
Sbjct: 462 EQLLQQGARPETVDRVITAFGMAMGPFQMADLAGLDVARMVRR-------GQGYALPVAD 514

Query: 405 LLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE-CRRLSNIMPGGKPISVTEKEIV 463
            L   GR G+  GKG Y YE G  P+PDP V  +I +  +RL     G    + T+ EI 
Sbjct: 515 ALCGLGRFGQKTGKGYYLYEDGRTPRPDPQVDQLIADVSKRL-----GAPQRTFTDDEIR 569

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLK 523
             I +P+VNE+ R+L+EGI  R SD+D   V G  FP++RGG+++WAD  G   +  +L 
Sbjct: 570 ARIFYPMVNEAARILDEGIAARPSDIDVTYVHGYGFPAWRGGLMYWADGEGLGTLARALA 629

Query: 524 KWSQLYG-NFFKPSRFLEERATK 545
            W++  G +  +P+  LE  A +
Sbjct: 630 AWAEETGEDRLRPAPLLERLARE 652


>gi|417861123|ref|ZP_12506178.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Agrobacterium tumefaciens F2]
 gi|338821527|gb|EGP55496.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Agrobacterium tumefaciens F2]
          Length = 681

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 162/428 (37%), Positives = 236/428 (55%), Gaps = 21/428 (4%)

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E + F EL     +  L HVFFA+RA  + P ++  G+ PR +R  AVIGGG MG+GIA 
Sbjct: 248 ERETFLELRGSSQAAALRHVFFAERAAPRPPELS--GITPRDIRSAAVIGGGTMGAGIAA 305

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
           A +   + V L E ++  + +G+  I +   G V RG++T+D A+     + G  DY   
Sbjct: 306 ALLDAGLPVTLIERDTAAVERGLANIRSIFEGSVKRGRITKDVADQRTASVTGSDDYGLL 365

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
            D D+VIEAV E + +K+ +F +L   C P  +LATNTS +D + + E     +R +G H
Sbjct: 366 ADTDLVIEAVFEDLAVKRAVFEKLSDICRPDAVLATNTSYLDPDAISEGVRQPERFLGLH 425

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF-FPYSQS 343
           FFSPAHVM LLEIV T  TS +V+     + +++ K+PV  G C GF  NR      +Q+
Sbjct: 426 FFSPAHVMKLLEIVPTATTSPEVLATGFALARLLGKIPVRAGICDGFIGNRILKVTRAQA 485

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-- 401
            RLL+S G     +D+A+R+FGLP+GPF+  DL G  +AA     F +       ++P  
Sbjct: 486 ERLLLS-GATPSAVDAAMRAFGLPMGPFEAQDLGGLDIAA-----FQRKAARARGETPFA 539

Query: 402 -LVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISV-T 458
            + D L    R G+ +G G Y Y  G + PKP  +V  II E         GG+   V  
Sbjct: 540 LVADRLCAIERFGQKSGGGWYDYLPGDRAPKPSETVAAIIAEEM-------GGRTQRVWD 592

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           E  I + I+ P+VNE+ R+LEE I +R++D+D   + G  FP +RGG + +A   G   V
Sbjct: 593 EASIADAIILPMVNEAMRILEEHIALRSADIDLVKIHGYGFPRWRGGPMHYAGERGLGEV 652

Query: 519 YTSLKKWS 526
              L + S
Sbjct: 653 VAVLDRLS 660


>gi|334343134|ref|YP_004555738.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
 gi|334103809|gb|AEG51232.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
          Length = 703

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 178/550 (32%), Positives = 283/550 (51%), Gaps = 20/550 (3%)

Query: 2   MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG-SLS 60
           +L  K + +++  +LG++DAV   +  + +   +A  +   + P +    R +KL  + +
Sbjct: 156 VLSGKPVGAKQALELGIVDAVEDGDPAV-IGAAFARRVIDEKIPAVPVRDRDEKLAETRA 214

Query: 61  EAREVLKLAR-LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +  +   LA+ L A+      PQ  A +D I      G    +  +A   +EL+    SR
Sbjct: 215 DPSDFDALAKKLTARSKGQLAPQ--ANIDSIRRSFTMGLDEAMAVDAVANRELMAGSQSR 272

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L H+FFA+R  +++P + +   K R V+K A+IG G MG GIA       I V + +  
Sbjct: 273 ALRHLFFAEREAARIPGLPETA-KARPVKKAAIIGAGTMGGGIAMCFAGAGIAVTVIDTT 331

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + L +G+  +  N    V RG + Q + +  L ++ G  D +   D D+VIEAV E + 
Sbjct: 332 QDALDRGLDRVRGNYATSVKRGSIAQAQMDERLALITGATDRAAAADADIVIEAVFEDMD 391

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K++IFS+LEK   P  ILA+NTS +D++ +       +  +G HFFSPA+VM LLE+V 
Sbjct: 392 VKKEIFSDLEKRVKPGTILASNTSALDVDEIASVLERPEDFVGMHFFSPANVMKLLEVVV 451

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + +S   IL  M VGK I KV V  GNC GF  NR     S  A  L+  G    ++D+
Sbjct: 452 AKHSSPDAILTAMAVGKAIGKVSVWSGNCDGFIGNRMVAKRSAQAERLLQQGAFPQQVDA 511

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           A+ + G P+GP    D++G  +  +  K     F       P+ D +++SGR G+  G G
Sbjct: 512 ALTNLGFPMGPLTTNDMSGLDIGYSIRKRRGTPF-------PIADAIVESGRLGQKTGAG 564

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y YE G + P P+P    +I        I        + E+E+V+ +LFP++NE  R+L
Sbjct: 565 YYRYEPGDRTPHPNPETEALIIATSEKMGI----ARRDIAEEEMVQRLLFPLINEGARIL 620

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPS 536
           EEGI +RASD+D   + G  +P + GG +F AD  G   +   L++ +    +    +P+
Sbjct: 621 EEGIALRASDVDLVWINGYGWPRHLGGPMFHADETGLAKIVAKLREMAAETPDDPSLQPA 680

Query: 537 RFLEERATKG 546
             L E A KG
Sbjct: 681 ALLTELAEKG 690


>gi|343502937|ref|ZP_08740774.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           tubiashii ATCC 19109]
 gi|418478661|ref|ZP_13047758.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           tubiashii NCIMB 1337 = ATCC 19106]
 gi|342812921|gb|EGU47906.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           tubiashii ATCC 19109]
 gi|384573696|gb|EIF04186.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           tubiashii NCIMB 1337 = ATCC 19106]
          Length = 707

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 176/550 (32%), Positives = 287/550 (52%), Gaps = 19/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + +++  KLG+ DAVV    LL V++ +    A ++K   +   +   + +  
Sbjct: 168 MILTGKQLRAKKAKKLGVADAVVPHTVLLDVAKSFVEKHAGKKKAKRKVSTKEKLISNTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+    KT  N P   A L VI  G+  G   G  KEA+ F ELVM   S
Sbjct: 228 LGRKVIFEQAAKKTNDKTRGNYPAADAILQVIRFGLEKGFEKGQKKEAERFGELVMTSES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++        +P+ + + AV+GGGLMG+GI+   +    + V +K+
Sbjct: 288 KALRSIFFA---TTEMKKEHGGDAQPKPIARAAVLGGGLMGAGISHVSVAKAKVPVRIKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +K           R  L++ +  + +  L G  D++ F   D+VIEAV E 
Sbjct: 345 VSNDGVLNALKYNYKLFEKQRKRHILSKAQLQSKMLQLSGGTDFTRFNHTDIVIEAVFED 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E       I ATNTS++ ++ + EK    + ++G H+FSP   MPL+E+
Sbjct: 405 LNLKQQMVADIESNAKDSTIFATNTSSLPIHQIAEKAERPENVVGLHYFSPVEKMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + TS + I  ++   +   K P+VV +C GF VNR   PY   A  ++  G  + ++
Sbjct: 465 IPHQGTSDETISTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLTGEPIEQL 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKAN 416
           D+A+ +FG P+GP  LLD  G  + A           +R FQ P V D LL   R G+ +
Sbjct: 525 DTALLNFGFPVGPITLLDEVGVDIGAKIMPILVAELGER-FQGPDVFDKLLNDDRKGRKS 583

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG YTY KG K + D SV        +L ++ P  K   + EK+I    + P++NE+ R
Sbjct: 584 GKGFYTY-KGKKKEVDKSVY-------KLLSLSPESK---LAEKDIAMRCVLPMLNEAVR 632

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + +Q YG+ F P 
Sbjct: 633 CLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGIEKLVEIMNEHAQKYGDRFAPC 692

Query: 537 RFLEERATKG 546
             L  RA  G
Sbjct: 693 DGLLTRAGIG 702


>gi|77165210|ref|YP_343735.1| multifunctional fatty acid oxidation complex subunit alpha
           [Nitrosococcus oceani ATCC 19707]
 gi|254433896|ref|ZP_05047404.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Nitrosococcus oceani AFC27]
 gi|76883524|gb|ABA58205.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Nitrosococcus oceani ATCC 19707]
 gi|207090229|gb|EDZ67500.1| 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family
           [Nitrosococcus oceani AFC27]
          Length = 744

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 183/573 (31%), Positives = 292/573 (50%), Gaps = 37/573 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKL-G 57
           M+L  K+  + +   LGL+D VV    LL+ +   A ++     ++P   +  +  ++ G
Sbjct: 168 MILTGKTHPASKACALGLVDEVVPRPVLLEAALARARELVQENNKEPEAGTFQQVSRIFG 227

Query: 58  SLSEAREVLKL-----------ARLQAKK-----TAPNMPQHQACLDVIEEGIVHGGYSG 101
           S+   R+V  L              QAKK     T  N+P     L+VI+ G+  G  +G
Sbjct: 228 SMLSLRKVRSLLLEKNSLGRSMVFNQAKKKVLSHTHGNLPAPLQALEVIKTGMEQGLEAG 287

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSG 161
              E + F +L +   +R L+ +F A+ A  K P  TD  + PR VRKV V+G GLMGSG
Sbjct: 288 FKAEVEAFGDLAVSTKARNLMALFLAKSALKKDPG-TDEEIAPRLVRKVGVLGAGLMGSG 346

Query: 162 IATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           IA        + V LK++  E L +G++T+   V   V + ++T  + +  L +++   +
Sbjct: 347 IAYVTAAKARLPVRLKDLKQEVLRQGLRTLWNAVTEQVKKRRMTAGEGDRVLALVRPTTE 406

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y+ FK  D+VIEAV+E + +KQ++  E+E    P  I A+NTS+I ++ + E +   + +
Sbjct: 407 YTGFKQADVVIEAVVEDLKVKQQVLREVEAHGGPEMIFASNTSSIPIHKIAEASDRPEAV 466

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           +G H+FSP   +PLLE++ TE+T  +V+   + +GK   K  +VV +  GF   R   PY
Sbjct: 467 VGMHYFSPVPKVPLLEVIVTEKTVPEVVATCVALGKQQNKTVIVVRDGAGFYTTRILAPY 526

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
              A  L++ GV +  ID A+ +FG P+GP +LLD  G  V    +   ++AF +R   +
Sbjct: 527 INEATHLLAEGVSIQDIDKALVNFGFPVGPLKLLDEVGIDVVQKIAHILEEAFGERMKPT 586

Query: 401 PLVDLLLKSGRNGKANGKGLYTYE------KGSKPKPDPSVLPIIEECRRLSNIMPGGKP 454
            ++  L+ S R GK NG+GLY Y+      KG   + D SV   +        I P  K 
Sbjct: 587 SVLAKLVSSHRLGKKNGQGLYRYQKMDGIFKGKGKQVDQSVYQSL-------GIKPDKK- 638

Query: 455 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 514
             +   EI    L P++NE+     EGI+  A D D  +V G+ FP + GG   + D  G
Sbjct: 639 --LEANEIAMRCLLPMINEAVHCYHEGILRSARDGDVGAVFGLGFPPFLGGPFRFIDNQG 696

Query: 515 ANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 547
              V   L  + + +G  F P+  L + A +GI
Sbjct: 697 LRNVSKQLVHYQEQFGKRFTPASLLVDLAQQGI 729


>gi|89901371|ref|YP_523842.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodoferax ferrireducens T118]
 gi|89346108|gb|ABD70311.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Rhodoferax ferrireducens T118]
          Length = 706

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 175/549 (31%), Positives = 282/549 (51%), Gaps = 12/549 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + +EE   LGL+D +  S ++L     +  ++ A   P +R       L    
Sbjct: 157 LMLSGRHMGAEEAHALGLVDRLGHSNDILADGLAYTQELLATHAP-VRRTRDAQALSDRQ 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR- 119
             R  ++  R +  K +  +      ++ +E  +      G+  E ++F  L  LD+++ 
Sbjct: 216 ANRASIEAVRAETGKKSRGLFSPLKIVEAVEAALDKSFDEGLRIERELF--LQCLDSAQR 273

Query: 120 -GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
            GL+H FFA+R   K P   +   KPR +  V V+GGG MG+GIA A +   + V + E 
Sbjct: 274 AGLIHAFFAEREVLKAPETRNT--KPRAIAHVGVVGGGTMGAGIAVAVLDAGLSVTMIER 331

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           +   L +G   IE    GL+ +G++T D     L    G   Y      D+VIEAV E +
Sbjct: 332 DEAALARGHAHIEKVYNGLIAKGRMTTDAKAANLARFVGSTSYDALAPADIVIEAVFEDM 391

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ +F+EL++ C P  +LATNTS +D++++    S    ++G HFFSPA++M LLEIV
Sbjct: 392 AVKQAVFAELDRVCKPGAVLATNTSYLDIDVIAASISRPADVVGLHFFSPANIMKLLEIV 451

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
              + SA V+     + K + KVPV  G C GF  NR    Y  +A  ++  G   ++ID
Sbjct: 452 VPAKVSADVVATAFELAKKLHKVPVRAGVCDGFIGNRILAAYRMAADYMMEDGASPYQID 511

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+R FG P+GPFQ+ DLAG  +  AT K        R+    + D + + G  G+  G+
Sbjct: 512 QAVRDFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPRARYVQIADRICERGWFGQKTGR 571

Query: 419 GLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y Y +G++   PDP +  II+  R  + I P     S T +EI+   +  ++NE   V
Sbjct: 572 GYYLYPEGARTGTPDPEIEAIIDAERARAGITPR----SFTNEEIMRRYMAAMINEGANV 627

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           + + I +R  D+D   + G  FP +RGG + +AD +G   V   ++++++    F++PS 
Sbjct: 628 VHQRIALRPLDVDVTFLYGYGFPRHRGGPMKYADTLGLPKVLADIREFAKEDPLFWQPSP 687

Query: 538 FLEERATKG 546
            L E   +G
Sbjct: 688 LLVELVERG 696


>gi|345317598|ref|XP_001512869.2| PREDICTED: peroxisomal bifunctional enzyme [Ornithorhynchus
           anatinus]
          Length = 704

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 286/566 (50%), Gaps = 27/566 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + + E  KLGL+D VV S+ + + +  +A  I+ +     R +++  ++  L 
Sbjct: 132 MITSGRHLLAPEALKLGLLDQVVNSDTV-EAAIKFAEQISGQPTESRRIMNK--QVPELP 188

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
               +   A L+ +K  P     +AC+  ++  + +    G+ KE  +F+ L     ++ 
Sbjct: 189 NMDSIFSEAYLKMRKQFPGCISREACVRAVQAAVQYPYPLGIEKEKDLFQYLHTSGQAKA 248

Query: 121 LVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           L ++FFAQR  +K    +    K    + +R  AVIG G MG GI  +    NI V+  E
Sbjct: 249 LQYLFFAQRICNKWSTSSGASWKNSSAQPIRSAAVIGLGTMGRGIVVSLARANIPVIAVE 308

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            + + L    + +   +   +   K+ +   + A    +  +   E  +VD+VIEAV E 
Sbjct: 309 QDEKQLELASRMVSFLLE--LEASKMQKSGQSWAAPKPRFTMSLEELGEVDLVIEAVFEE 366

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LK+++FS+L   C P   L TNTS ++++ +   T    R+IG HFFSPAHVM LLE+
Sbjct: 367 IGLKKQVFSKLSAICKPEAFLCTNTSALNIDEIASSTRHPQRVIGTHFFSPAHVMTLLEV 426

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +   R+S   I  +M++ K +KKV VVVGNC GF  NR  FPY Q    L+  G     +
Sbjct: 427 IPGRRSSPTTIATVMSLAKTMKKVGVVVGNCFGFVGNRMLFPYVQQTYFLLEEGSQPEEV 486

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPD-----------RSFQSPLVDLL 406
           D  +  FG  +GPF++ DLAG  +   + +      P            R    P+ D+L
Sbjct: 487 DRVLEEFGFKMGPFRVSDLAGLDIGWKSRQGQGLTGPTLAPGTPARQRGRKRYCPIPDML 546

Query: 407 LKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 464
            + GR G+  GKG Y Y++  G   KPDP +   + E R+  +I    +PIS  + EI+E
Sbjct: 547 CEQGRFGQKTGKGWYRYDRPMGRIHKPDPWLSKFLSEYRKTHHIET--RPIS--QDEILE 602

Query: 465 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 524
             L+ ++NE  R+L EGI      +D   + G  +P + GG +F+A  VG   V   L+K
Sbjct: 603 RCLYALINEGFRILGEGIAAGPEHVDCIYINGFGWPKHTGGPMFYASTVGLPTVLEKLQK 662

Query: 525 WSQLYGNF--FKPSRFLEERATKGIP 548
           + +   +    +PS FL++ A++G P
Sbjct: 663 YYRSNPDIPQLEPSHFLKKLASQGNP 688


>gi|296284660|ref|ZP_06862658.1| fatty oxidation complex, alpha subunit [Citromicrobium
           bathyomarinum JL354]
          Length = 678

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 154/426 (36%), Positives = 231/426 (54%), Gaps = 18/426 (4%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPR--GVRKVAVIGGGLM 158
           GV KE ++F +L+    S+ + H FFA+RA +KV    DI   P    ++KV +IG G M
Sbjct: 249 GVKKERELFMKLMTGTQSKAMRHYFFAERAANKV---DDIPADPPLIDIKKVGIIGAGTM 305

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G GIA   +   I V + E+  E L +G  T+  N      +G++T ++   A+  L   
Sbjct: 306 GGGIAMNFLSAGIPVTILEMKQEALDRGTATMRKNYEATAKKGRMTAEQVEQAMGHLTPT 365

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           L+YS+  D D+VIEAV ES+ +K+ +F +L+K      ILA+NTS +D+N +   T    
Sbjct: 366 LEYSDLADCDLVIEAVYESMDVKKDVFGKLDKVVKQGAILASNTSYLDINEIATATERPG 425

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
            ++G HFFSPA+VM LLE+VR E+T   V+   M + K I KV  V G C GF  NR   
Sbjct: 426 YVLGLHFFSPANVMKLLEVVRGEKTRDDVLATAMKLSKKIGKVAAVSGVCPGFIGNRMLS 485

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
              + A  L+  G + + +D  +  FG P+GPFQ+ DLAG  +             D S 
Sbjct: 486 KRQEQANQLILEGANYWDVDDVLLDFGFPMGPFQMGDLAGIDIGWHR---------DPSK 536

Query: 399 QSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
            + + + L   GR G+  GKG Y Y++  +  P   V  II +         G +   ++
Sbjct: 537 VTTIREALCAVGRFGQKAGKGFYDYDEARQRTPSDEVKQIIADFAEKE----GNEQRDIS 592

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           + EI E +L+P+VNE  ++L+EG+  RASD+D   + G  +P Y GG +FWAD +G + V
Sbjct: 593 KDEIRERLLYPMVNEGAKILDEGMAQRASDIDVVWINGYGWPLYTGGPMFWADTIGLDTV 652

Query: 519 YTSLKK 524
              L+K
Sbjct: 653 VAGLEK 658


>gi|410897016|ref|XP_003961995.1| PREDICTED: peroxisomal bifunctional enzyme-like [Takifugu rubripes]
          Length = 718

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 180/569 (31%), Positives = 282/569 (49%), Gaps = 37/569 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++   + +T+ E  +LG++D V T    + V+  +AL +        R    +     LS
Sbjct: 150 LITTGRHVTAAEALQLGILDHV-TEHNTVDVAVKFALSVTGESLDGRRI--SSFSCAPLS 206

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +   + + A L+ +  A       AC+  +          G+ +E ++   L     +R 
Sbjct: 207 DLDSLFEEAMLKVRGAARGAIAPVACVQAVRAAATLPYAQGMEREKELMATLFHSGQARA 266

Query: 121 LVHVFFAQRATSKVPNVTDIGL---KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           L + FFAQRA  +    +       +PR VRK AVIG G MG GI  A     + VV  E
Sbjct: 267 LQYFFFAQRAVGRWSTPSGARWDTSQPRPVRKAAVIGLGTMGRGITVALAQAGLSVVAVE 326

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE----FKDVDMVIEA 233
            +++ L++  K + + ++    RG  T +  +         + YSE      DVD+VIEA
Sbjct: 327 THAKQLMEAKKAVPSMLKRGAVRGGTTIEPDS---------ITYSETVQAVADVDLVIEA 377

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LK+K+F +L   C P  +L TNTS++D++ +  +T   + ++G HFF+PAHVM 
Sbjct: 378 VFEDMALKEKVFQQLSIVCKPDTLLCTNTSSLDVDHLASQTRHPELVVGMHFFAPAHVMK 437

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLE+V   R+S   +   M +GK + KV V VGNC GFA NR    Y + A  L+  G  
Sbjct: 438 LLEVVYGRRSSPAAVATAMQLGKKMGKVSVAVGNCRGFAGNRMLKRYLEQAFFLLEEGAT 497

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE---FDKAFPDRSFQ-------SPLV 403
              +D A+  FG P+G F++ DL+G  V     K     D +    S +       SPL 
Sbjct: 498 PELVDRALEEFGFPMGVFRMSDLSGLDVGWRVRKADGLADTSLTGTSARVRQGCRYSPLG 557

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           DLL + GR G+  G+G Y Y+K  G   K DP +   ++E R    ++    P  + ++E
Sbjct: 558 DLLCEHGRFGQKTGRGWYQYDKPGGRVAKSDPWLHNFLDEYRARHGLV----PRCIDQQE 613

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           ++E  LF ++NE  ++LEEGI     D+D   V G  +P +RGG +F+AD VG   V   
Sbjct: 614 VLERCLFVLINEGFQILEEGIAAGPEDIDAIYVFGYGWPRHRGGPMFYADMVGLERVVER 673

Query: 522 LKKWSQLYGN--FFKPSRFLEERATKGIP 548
           L+++ Q + N  + +PS  L      G P
Sbjct: 674 LERYHQAHPNVPYLQPSGLLRRLVANGSP 702


>gi|298157738|gb|EFH98817.1| fatty acid oxidation complex alpha subunit [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
          Length = 721

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 175/567 (30%), Positives = 291/567 (51%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G +DAVV  E       +L++ +    LD  A+R+P +  L    KL +
Sbjct: 172 KESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDAVAKE--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     H ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +  +VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A+KG       SS
Sbjct: 694 -GALYQPTAKLREMASKGQSFFGQASS 719


>gi|146312523|ref|YP_001177597.1| multifunctional fatty acid oxidation complex subunit alpha
           [Enterobacter sp. 638]
 gi|166972671|sp|A4WCW6.1|FADJ_ENT38 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|145319399|gb|ABP61546.1| 3-hydroxyacyl-CoA dehydrogenase [Enterobacter sp. 638]
          Length = 715

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 176/550 (32%), Positives = 281/550 (51%), Gaps = 24/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K+GL+D VV    LL      A+++A + +   R L   +++  G 
Sbjct: 167 MILTGKQLRPRQALKVGLVDEVVPHSILLTA----AVELAQKERQASRHLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A    ++ +   +KT  N P  +  LDVIE G+  G  SG   EAK F EL M   S
Sbjct: 223 LGRALLFNRVGKKTEQKTKGNYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +++   P     V   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SEVAPGPLNAIGVLGGGLMGGGISFVTAS-KGKLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   ++     +   V R  +   + + AL ++ G +D+S FK  D+VIEAV E +
Sbjct: 341 NAKGINHALQYSWQLLDQKVKRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +++E+ C PH I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 QLKQQMVADVEQYCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
             E TSAQ +  ++ + K   K P+VV +  GF VNR   PY   A  L++ G  V  +D
Sbjct: 461 PHESTSAQTVATVVKLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENVD 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
            A+  FG P+GP QLLD  G           + A+ +R F  P  +V  +L   R G+ N
Sbjct: 521 DALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSPPANVVSAILNDDRKGRKN 579

Query: 417 GKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y    + SK + DPSV  +I       N    GK   +T ++  E  +  ++NE
Sbjct: 580 GRGFYLYAAKGRKSKKQVDPSVYGLI-------NASGQGK---LTAQQCAERCVMMMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E ++  A D D  +V G+ FP + GG   + D++GA  V  +L++ + LYG+ F
Sbjct: 630 AARCFDEKVIKNARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLASLYGSRF 689

Query: 534 KPSRFLEERA 543
            P   L++ A
Sbjct: 690 TPCETLKQMA 699


>gi|254506914|ref|ZP_05119053.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
           parahaemolyticus 16]
 gi|219550199|gb|EED27185.1| fatty oxidation complex, alpha subunit FadJ [Vibrio
           parahaemolyticus 16]
          Length = 707

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 176/550 (32%), Positives = 289/550 (52%), Gaps = 25/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DAVV    LL V++ +    A + K   +   +   + +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDAVVPETILLDVAKSFVEKNAGKSKGKRKVSTKEKLISNTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P   A L+VI  G+  G   G  KEA+ F ELVM   S
Sbjct: 228 LGRKVIFDQAAKKTFEKTRGNYPAADAILEVIRYGLEKGFEQGQKKEAERFAELVMTSES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K  N +D   +P  V++ AV+GGGLMG+GI+   +    + V +K+
Sbjct: 288 KALRSIFFATTEMKK-ENGSDA--EPLSVKRAAVLGGGLMGAGISHVSVAKAKVPVRIKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGK---LTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           V+ + +L  +K    N +   T+ K   +++ +  + +  L G  D++ F   D+VIEAV
Sbjct: 345 VSEDGVLNALKY---NYKLFETQRKRRIISKAQLQSKMLQLSGGTDFTSFNHTDIVIEAV 401

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++E+      I ATNTS++ +  + EK    + ++G H+FSP   MPL
Sbjct: 402 FEDLDLKQKMVADIEENAKDSTIFATNTSSLPIGQIAEKAQRPENVVGLHYFSPVEKMPL 461

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           +E++  E TS + +  ++   +   K P+VV +C GF VNR   PY   A  ++  G  +
Sbjct: 462 VEVIPHEGTSDETVSTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMSGEPI 521

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNG 413
             +D A+ +FG P+GP  LLD  G  + A           +R F+ P V D LL  GR G
Sbjct: 522 GHLDKALLNFGFPVGPITLLDEVGVDIGAKIMPILVNELGER-FKGPDVFDTLLNDGRKG 580

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           + +GKG YTY KG K + D SV        +L  + P  K   + ++E+    + P++NE
Sbjct: 581 RKSGKGFYTY-KGKKKEVDKSVY-------KLLGLSPESK---MAQEEMAMRCVLPMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + ++ YG+ F
Sbjct: 630 AVRCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGVKKLVEIMNQHAEKYGDRF 689

Query: 534 KPSRFLEERA 543
            P   L  RA
Sbjct: 690 APCDGLLTRA 699


>gi|167813999|ref|ZP_02445679.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 91]
          Length = 432

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/428 (35%), Positives = 227/428 (53%), Gaps = 7/428 (1%)

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           GLVH FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E +
Sbjct: 1   GLVHAFFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERD 58

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
              L +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + 
Sbjct: 59  DASLERGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMA 118

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ +F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V 
Sbjct: 119 VKKAVFAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVV 178

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
             + SA V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID 
Sbjct: 179 PAKVSADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDR 238

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
           AIR FG P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G
Sbjct: 239 AIREFGFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRG 298

Query: 420 LYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
            Y Y  G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+
Sbjct: 299 YYLYPDGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVV 354

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
            E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  
Sbjct: 355 HEKIALRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPL 414

Query: 539 LEERATKG 546
           L +   +G
Sbjct: 415 LVDLVARG 422


>gi|395492969|ref|ZP_10424548.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas sp. PAMC 26617]
          Length = 681

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 177/534 (33%), Positives = 271/534 (50%), Gaps = 33/534 (6%)

Query: 17  GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK- 75
           GLID +     L   +  +A ++A   KP  R+    DK+   ++   V    +  AK+ 
Sbjct: 172 GLIDRLANENNLEADAIAFACEVA-DTKPLPRA---RDKVAQ-ADPEAVAAFKKDNAKRF 226

Query: 76  ---TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132
               AP    + AC++   +G       G+  E + F +L+M   S    H+FFA+R  +
Sbjct: 227 RGFEAP--AANIACVEKATDGSSFD--EGIAFERQEFMKLMMGVQSAAQRHIFFAERQAA 282

Query: 133 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 192
           K+  + D  +  R +++V VIG G MG GI+   +   I V + E+  E L +G  TI  
Sbjct: 283 KIDGI-DPKIPLREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGAATIRK 341

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
           N      +G+L  ++   A+  L    D+    D D++IEAV E++ +K++IF+ L+   
Sbjct: 342 NYEASAAKGRLKPEQVEQAMGALTPTFDFEALADCDLIIEAVYENMDVKKEIFTRLDAIA 401

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
            P  ILA+NTS +D++ +   T     ++G HFFSPA+VM LLE+VR  +T   V+  +M
Sbjct: 402 KPGAILASNTSYLDIDEIASVTKRPGDVVGMHFFSPANVMKLLEVVRGAQTEDDVLATVM 461

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            + K I+KV VV G C GF  NR   P    A  L+  G    +ID    +FG+P+GPFQ
Sbjct: 462 ALSKTIRKVAVVAGVCDGFIGNRMLKPRQVEAMKLLMEGATPEQIDKVHVAFGMPMGPFQ 521

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 432
           + DLAG  +            P+R     + D L   GR G+  GKG Y Y++   P P 
Sbjct: 522 MSDLAGVDIGWHRD-------PNRI--ENIRDALAAEGRWGQKTGKGFYDYDEKRNPTPS 572

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
             V  IIE+ R  SN+    +   ++++EIVE  L+ +VNE   +LEE +  RASD+D  
Sbjct: 573 ARVAEIIEDFRSKSNL----QKREISDQEIVEKTLYTMVNEGALILEEKMAQRASDIDVV 628

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + G  +P YRGG +FWAD  G   +   L+K        F  +  L+ +A  G
Sbjct: 629 WIYGYGWPVYRGGPMFWADTEGLKTIVAGLEKHG------FAVAELLKSKAESG 676


>gi|407714172|ref|YP_006834737.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
           BR3459a]
 gi|407236356|gb|AFT86555.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phenoliruptrix
           BR3459a]
          Length = 734

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/550 (31%), Positives = 280/550 (50%), Gaps = 14/550 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  +++E   LGL+D +  S ++L     +A  + A       +  RT    +LS
Sbjct: 185 LMLSGRHASAKEALALGLVDRLGASGDILAEGLAYAHALLAAHA----TARRTRDAAALS 240

Query: 61  E---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           +   +   L  AR + +K +  +      +D +E  +      G+  E ++F + +    
Sbjct: 241 DRAASLAALAAARTETEKKSRGLFSPLKIVDAVEAAVTQPFEEGLRVERQLFLQCLDSPQ 300

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
             GLVH FFA+R   K P   D   KPR +  + V+GGG MG+GIA A +   + V + E
Sbjct: 301 RAGLVHAFFAEREVLKAPETRDA--KPRALEAIGVVGGGTMGAGIAVAVLDAGLPVTMIE 358

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
            +   L +G   IE    GL+ +G+++  K    +    G   Y    + D+VIEAV E 
Sbjct: 359 RDEASLARGRAHIEKVYDGLIAKGRMSAAKKAELMARWTGSTSYEALANADLVIEAVFED 418

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + +K+ +F+EL++ C    +LATNTS +D++ +    S    +IG HFFSPA++M LLE+
Sbjct: 419 LAVKKAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPANIMKLLEV 478

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           V     SA V+     + K ++K PV  G C GF  NR    Y  +A  ++  G   ++I
Sbjct: 479 VVPRAVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRILAVYRSAADAMMEDGASPYQI 538

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D+A+R+FG P+GPFQ++DLAG  +  A  K         +    + D L + G  G+  G
Sbjct: 539 DAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTG 598

Query: 418 KGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           +G Y Y +GS+  +PDP V  II+  R  + I P     S T+ +I+   +  ++NE   
Sbjct: 599 RGFYLYPEGSRSGQPDPEVEAIIDAERARAGITPR----SFTDDKIMRRYMAAMINEGAN 654

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           V+ E I +R  D+D   + G  FP YRGG + +AD VG   +   ++++++     ++ S
Sbjct: 655 VVHERIALRPLDVDVTFLYGYGFPRYRGGPMKYADMVGLPRILADIREFAKEDPLLWQAS 714

Query: 537 RFLEERATKG 546
             L E   +G
Sbjct: 715 PLLVELVERG 724


>gi|341613565|ref|ZP_08700434.1| fatty oxidation complex, alpha subunit [Citromicrobium sp. JLT1363]
          Length = 678

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 152/425 (35%), Positives = 233/425 (54%), Gaps = 16/425 (3%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMG 159
           GV KE ++F +L+    S+ + H FFA+RA +KV ++  D  L    ++KV +IG G MG
Sbjct: 249 GVKKERELFGKLMTGTQSKAMRHYFFAERAANKVDDIPADTPLID--IKKVGIIGAGTMG 306

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
            GIA   +   I V + E+  E L +G  T+  N      +G++T ++   A+ +L   L
Sbjct: 307 GGIAMNFLSAGIPVTILEMKQEALDRGTATMRKNYEATAKKGRMTAEQVEQAMGLLTPTL 366

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           +YS+  D D+VIEAV ES+ +K+ +F +L++      ILA+NTS +D+N +   T     
Sbjct: 367 EYSDLADCDLVIEAVYESMDVKKDVFGKLDEVVKDGAILASNTSYLDINEIATATKRPGY 426

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA+VM LLE+VR E+T   V+   M + K I KV  V G C GF  NR    
Sbjct: 427 VLGLHFFSPANVMKLLEVVRGEKTRDDVLATAMKLSKKIGKVAAVSGVCPGFIGNRMLSK 486

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
             + A  L+  G + + +D  +  FG P+GPFQ+ DLAG  +             D S  
Sbjct: 487 RQEQANQLILEGANYWDVDDVLLDFGFPMGPFQMGDLAGIDIGWHR---------DPSKV 537

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
           + + + L   GR G+  GKG Y Y++  +  P   V  II +         G +   +++
Sbjct: 538 TTIREALCAVGRFGQKAGKGFYDYDEARQRTPSDEVKQIIADFAEKE----GNEQRDISK 593

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
            EI E +L+P+VNE  ++L+EG+  RASD+D   + G  +P Y GG +FWAD +G + V 
Sbjct: 594 DEIRERLLYPMVNEGAKILDEGMAQRASDIDVVWINGYGWPLYTGGPMFWADTIGLDTVV 653

Query: 520 TSLKK 524
             L+K
Sbjct: 654 AGLEK 658


>gi|260772456|ref|ZP_05881372.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           metschnikovii CIP 69.14]
 gi|260611595|gb|EEX36798.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           metschnikovii CIP 69.14]
          Length = 708

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 175/550 (31%), Positives = 298/550 (54%), Gaps = 18/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++ +KLG++DA V    LL+V+  +  D + +R+    SL +   L +  
Sbjct: 168 LILTGKQLRAKKAYKLGVVDACVPQSVLLEVALRFVGDNSKKRRQAKPSL-KEKLLANTG 226

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + ++   +KT  N P  +A L+VIE G+  G  +G+ +EAK F ELVM + S
Sbjct: 227 LGRKIIFDQASKKTEQKTRGNYPAAKAILEVIEHGLNKGLKAGLEQEAKRFGELVMTNES 286

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++        +P+ V+ V+V+GGGLMG+GI+   +    + V +K+
Sbjct: 287 KALRSIFFA---TTEMKKEHGSDAEPKPVKHVSVLGGGLMGAGISHVSVAKAKLPVRIKD 343

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +            R  +++ +  N++  L G  D+  F+  D+VIEAV E 
Sbjct: 344 VSNDGILNALSYNYGLFEKQRKRKIISKAQLQNSMMQLAGGTDFRGFQQTDVVIEAVFED 403

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E+   P  I ATNTS++ +  + EK +  + I+G H+FSP   MPL+E+
Sbjct: 404 LALKQQMVADVEQHAQPSTIFATNTSSLPIGQIAEKATRPENIVGLHYFSPVEKMPLVEV 463

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS + I  ++ + K   K P+VV +  GF VNR   PY   A  ++  G  + +I
Sbjct: 464 IPHSTTSPETIATVVALAKKQGKTPIVVKDRAGFYVNRILAPYMNEAANVLMAGETIEKI 523

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKAN 416
           D A+ +FG P+GP  LLD  G  V +            R F+ P V ++LL   R G+  
Sbjct: 524 DKALLNFGFPVGPITLLDEVGIDVGSKIMPILVNELGPR-FKGPDVFEVLLNDNRKGRKT 582

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG Y+Y+KGS          + +   +L N+ P  K     E+EI    + P++NE+ R
Sbjct: 583 GKGFYSYKKGS------KKKEVDKSVYKLLNLTPESK---WDEQEIAMRCVLPMLNEAVR 633

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+    D D  ++ G+ FP + GG   + D +G + +   +K+ +Q YG+ F P 
Sbjct: 634 CLDEGIIHSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGLDKLIEQMKQHAQKYGDHFAPC 693

Query: 537 RFLEERATKG 546
             L  RA+ G
Sbjct: 694 DALITRASVG 703


>gi|289625348|ref|ZP_06458302.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
 gi|422582917|ref|ZP_16658048.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330867755|gb|EGH02464.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 721

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 175/567 (30%), Positives = 291/567 (51%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G +DAVV  E       +L++ +    LD  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     H ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +  +VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A+KG       SS
Sbjct: 694 -GALYQPTAKLREMASKGQSFFGQASS 719


>gi|261252399|ref|ZP_05944972.1| fatty oxidation complex alpha subunit FadJ [Vibrio orientalis CIP
           102891 = ATCC 33934]
 gi|417954054|ref|ZP_12597094.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           orientalis CIP 102891 = ATCC 33934]
 gi|260935790|gb|EEX91779.1| fatty oxidation complex alpha subunit FadJ [Vibrio orientalis CIP
           102891 = ATCC 33934]
 gi|342816094|gb|EGU50999.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           orientalis CIP 102891 = ATCC 33934]
          Length = 707

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 174/548 (31%), Positives = 292/548 (53%), Gaps = 21/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG+ DAVV    LL+V++ +    + + K   ++  +   + +  
Sbjct: 168 LILTGKQLRAKKAKKLGVADAVVPETILLEVAKSFVEKNSGKSKSKRKASTKEKLISNTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P   A L+VI  G+  G   G  KEA+ F ELVM   S
Sbjct: 228 LGRKVIFEQAAKKTNQKTRGNYPAADAILEVIRFGLEKGFEQGQQKEAERFGELVMTSES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++         P+ +   AV+GGGLMG+GI+   +    +   +K+
Sbjct: 288 KALRSIFFA---TTEMKKEHGSDADPKAIANAAVLGGGLMGAGISHVSVAKAKVPTRIKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +K           R  +++ +  + +  L G +D++ F   D+VIEAV E 
Sbjct: 345 VSNDGVLNALKYNFKLFEKQRKRRIISKAQLQSKMLQLSGGVDFTRFNHTDIVIEAVFED 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQK+ +++E+      I ATNTS++ ++ + EK    + ++G H+FSP   MPL+E+
Sbjct: 405 LDLKQKMVADVEENAKDSTIFATNTSSLPIHQIAEKAQRPENVVGLHYFSPVEKMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFR 356
           +  E TS + I  ++   +   K P+VV +C GF VNR   PY +++A++L+S G  + +
Sbjct: 465 IPHETTSDETISTVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLLS-GEPIEQ 523

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKA 415
           +D A+ +FG P+GP  LLD  G  + A            R FQ P V D LL  GR G+ 
Sbjct: 524 LDKALLNFGFPVGPITLLDEVGVDIGAKIMPILVAELGGR-FQGPDVFDKLLNDGRKGRK 582

Query: 416 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           +GKG YTY KG K + D S+        +L  + P     S+ EK+I    + P++NE+ 
Sbjct: 583 SGKGFYTY-KGKKKEVDKSIY-------KLLGLNPES---SLAEKDIAMRCVLPMLNEAV 631

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + ++ YG+ F P
Sbjct: 632 RCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGIKQLVEIMNEHAKKYGDRFAP 691

Query: 536 SRFLEERA 543
              L  RA
Sbjct: 692 CDGLLTRA 699


>gi|226228262|ref|YP_002762368.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
           aurantiaca T-27]
 gi|226091453|dbj|BAH39898.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Gemmatimonas
           aurantiaca T-27]
          Length = 737

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 176/561 (31%), Positives = 274/561 (48%), Gaps = 27/561 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRS-----LHRTDK 55
           ++L  K++ + +   +GL+  +V    LL V+   A  +A   +  +R      + R  +
Sbjct: 190 LILTGKNVRARKALPMGLVHELVHPAILLDVAMQRARQLAHGDRSAVRERRPGLVERALE 249

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
             S+  A    K      KKT  + P   A LDVIE G      +G+L+EAK F EL + 
Sbjct: 250 ENSVGRAIIFRKARESVTKKTGGHYPAPFAALDVIERGYRESFAAGLLEEAKRFGELAVS 309

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGL------KPRGVRKVAVIGGGLMGSGIATAHILN 169
              R L ++FFA  +  K     D GL       PR V K+ V+G G MG+GI    +  
Sbjct: 310 PECRQLAYLFFATTSLKK-----DTGLPAGQNVAPRAVHKLGVLGAGFMGAGITAVAVQA 364

Query: 170 NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDM 229
              V LK+   E L  G K +   VR  + + ++T+ + ++ + ++ G +DY  F +VD+
Sbjct: 365 GTVVRLKDGTVERLASGFKAVRDVVRERLVKRQITRVQFDDTMSLVGGTVDYRGFANVDL 424

Query: 230 VIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA 289
           VIEAV E + +K ++  E+E+  P   I A+NTSTI +  +       ++++G HFFSP 
Sbjct: 425 VIEAVFEDLDVKHQVLREVEETTPA-AIFASNTSTIPIRDIARAAKRPEQVLGMHFFSPV 483

Query: 290 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVS 349
           H MPLLE++ T  TSA+     +  GK + K  +VV +  GF VNR   PY      +V 
Sbjct: 484 HRMPLLEVIVTPETSAETTATAVAYGKQLGKTVIVVQDGAGFYVNRILAPYLNECGRMVD 543

Query: 350 LGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKS 409
            G  +  ID A+  FG P+GPF LLD  G  +A  +    + AF  R   S  +  ++ S
Sbjct: 544 EGASIEDIDKALVQFGFPVGPFTLLDEVGLDIAGKSGPIMEAAFGPRMQPSATLRAVIAS 603

Query: 410 GRNGKANGKGLYTYE-KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GR G+   KG Y Y+  G +   D S+  +     R   +     P+    +EI +  + 
Sbjct: 604 GRLGRKARKGFYRYDADGKRQGVDDSIYAMTPVGARRRTL-----PV----EEIQQRAVL 654

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P++NE+ R L+EGI+    D D  +V G+ FP +RGG     D +G   V   L      
Sbjct: 655 PLLNEAVRCLDEGIIRSPRDGDIGAVFGIGFPPFRGGPFRLLDTMGLANVVAQLDALHAR 714

Query: 529 YGNFFKPSRFLEERATKGIPL 549
           +   F+ ++ L  RA +  P 
Sbjct: 715 FPGRFEVAKLLRARADRQQPF 735


>gi|289647496|ref|ZP_06478839.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 721

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 289/558 (51%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G +DAVV  E       +L++ +    LD  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGELDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     H ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +  +VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  ++P+  L E A+KG
Sbjct: 694 -GALYQPTAKLREMASKG 710


>gi|410612697|ref|ZP_11323773.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
 gi|410167810|dbj|GAC37662.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
          Length = 698

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 186/558 (33%), Positives = 304/558 (54%), Gaps = 22/558 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR-SLHRTDKLGS- 58
           +M     I + +   +GLID VV   +LL  +  +A ++ A+     R S    DK  + 
Sbjct: 150 LMTTGAPIAAAQALNIGLIDKVVEG-DLLSAALDFANEVIAQGAELKRVSDLEVDKTTAS 208

Query: 59  ---LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
               +E R+ L   RL+ ++ AP+       ++ IE  +      G+  E ++F E +  
Sbjct: 209 AEFFAEYRKTLS-KRLRGQE-APHR-----IVECIEAALNTPFDEGLKVERRLFVECMQS 261

Query: 116 DTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 174
             S  L H+FFA+R +SKV ++  D  LK   +++V +IGGGLMG GIA   +   I V 
Sbjct: 262 SQSGALQHMFFAERMSSKVKDLPKDTQLKD--IKRVGIIGGGLMGGGIAMNFVNVGIPVT 319

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           L E++ E L +G   I  N    V++GKLT + A     M+ G  DY++  D+D+VIEAV
Sbjct: 320 LLEISQEALQRGKDLIAKNYAMTVSKGKLTVELATQRQDMITGTTDYNDLADMDLVIEAV 379

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E++ +K+++F++L+  C    ILA+NTS  D+N++ + TS    +IG HFFSPA+VM L
Sbjct: 380 FENLDIKKQVFAKLDNVCKQGAILASNTSYQDVNLIAQSTSRPQDVIGLHFFSPANVMKL 439

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           LEIVR + TS +V+   M + K IKKVP +   C GF  NR    Y++ A+L +  G   
Sbjct: 440 LEIVRGDETSDEVVATSMAIAKSIKKVPALSRVCYGFIGNRMLRHYAREAQLCLLEGSTP 499

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID+ ++ FG+ +GP  + DLAG  +     +              + D L + GR G+
Sbjct: 500 QNIDAVMQKFGMAMGPLAVGDLAGIDIGYKAREGLTDEQKGDVRTYCIADALYEMGRLGQ 559

Query: 415 ANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
             G G Y Y+  ++ +  DP V+ +IE   +   +    +   +++K I++ + F ++NE
Sbjct: 560 KTGAGYYQYDPETRQRSVDPVVMEVIEAQAKKRGV----ERKVISDKTILDRLTFALINE 615

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NF 532
             ++LEEGI  R SD+D     G  FP+YRGG +F+AD +G   +Y ++ +++  YG  F
Sbjct: 616 GFKILEEGIAQRPSDIDVVYAFGYGFPAYRGGPMFYADTIGLEKIYHTVCEFADTYGEEF 675

Query: 533 FKPSRFLEERATKGIPLS 550
           ++P+  L++   +G  L+
Sbjct: 676 WQPAALLKQLVEEGKTLT 693


>gi|148553249|ref|YP_001260831.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas wittichii RW1]
 gi|148498439|gb|ABQ66693.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Sphingomonas wittichii RW1]
          Length = 748

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 170/551 (30%), Positives = 280/551 (50%), Gaps = 20/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
            +L  K + + +   LG++DAV        +   +A  +   + P +    R D++ +  
Sbjct: 200 FVLSGKPVGAAQALALGILDAVEDGAPD-AIGAAFARRVIDEKLPAVAVSRRDDRIAATR 258

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDV--IEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                     L AK TA +  Q     +V  +           +  +A+  + L+    S
Sbjct: 259 ADPSAFDA--LAAKLTARSKGQEAPAANVAAVRRSFTLPFDEAMAIDAEANRALMAGSQS 316

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           R L H+FFA+R  +++P +     + R V   A+IG G MG GIA       I VV+ + 
Sbjct: 317 RALRHLFFAEREAARIPGLPK-DARARDVASAAIIGAGTMGGGIAMCFAGAGIPVVIVDT 375

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E L +G++ + AN    V RG ++Q++ +  L ++    D +   D D+VIEAV E +
Sbjct: 376 TQEALDRGMERVRANYATSVKRGSISQEQVDKRLALITPATDRAAVADADLVIEAVFEDM 435

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K++IFS+LEK   P  +LA+NTS +D++ +       +  +G HFFSPA+VM LLE+V
Sbjct: 436 AVKKEIFSDLEKRVKPGTVLASNTSALDVDEIAAALDRPEDFVGMHFFSPANVMKLLEVV 495

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           +  ++S + IL  M VG+ I KVPV  GNC GF  NR     S  A  L+  G    ++D
Sbjct: 496 QAAKSSPEAILTAMAVGRKIGKVPVWSGNCDGFIGNRMVAKRSAQAERLLQRGAFPPQVD 555

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
           +A+   G P+GP    D++G  +  A  K     F       P+ D +++SG+ G+  G 
Sbjct: 556 AALTKLGFPMGPLTTNDMSGLDIGYAIRKRRGTPF-------PIADAIVESGQLGQKTGS 608

Query: 419 GLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           G Y YE G + P+P+P    +I      ++   G +   ++E E+VE +LFP++NE  R+
Sbjct: 609 GYYRYEPGDRTPRPNPDTDALIVA----TSAKLGIERREMSEGEMVERLLFPLINEGARI 664

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKP 535
           +E GI +R SD+D   + G  +P + GG +F AD  G  ++   L++++    +    +P
Sbjct: 665 VEAGIALRPSDVDLVWINGYGWPRHLGGPMFHADETGLAHIVARLREFAADTPDDPSLEP 724

Query: 536 SRFLEERATKG 546
           +  L E A KG
Sbjct: 725 APLLVELAAKG 735


>gi|71734566|ref|YP_275370.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|416017422|ref|ZP_11564541.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|416027901|ref|ZP_11571075.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|83288143|sp|Q48GW3.1|FADB_PSE14 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|71555119|gb|AAZ34330.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320323884|gb|EFW79968.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320328021|gb|EFW84026.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 721

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 174/567 (30%), Positives = 290/567 (51%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G +DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     H ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +  +VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A+KG       SS
Sbjct: 694 -GALYQPTAKLREMASKGQSFFGQASS 719


>gi|83950253|ref|ZP_00958986.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
 gi|83838152|gb|EAP77448.1| 3-hydroxyacyl-CoA dehydrogenase [Roseovarius nubinhibens ISM]
          Length = 653

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 173/512 (33%), Positives = 253/512 (49%), Gaps = 15/512 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR--KPWIRSLHRTDKLGS 58
           M+   K +T+ +   +GLIDA+   +  L+ +   ALD    R   P    L        
Sbjct: 150 MISGGKPVTAPKALDIGLIDALAEGD--LQEA---ALDFLRARLDAPLPTPLRHRQPHAP 204

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
              A    +  RL A+      P   A L+ IE  +       + +E   F  L     S
Sbjct: 205 RDAADWDKRRQRLHARARGQAAPL--AALEAIETALKEPADLALARERDSFLRLKSHPES 262

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L HVFFA+RA  ++P + D+   P  + ++ VIGGG MG+GIATA +L ++ V L E 
Sbjct: 263 AALRHVFFAERAAGQMPRLKDV--TPGPLTQIGVIGGGTMGAGIATACLLADLPVTLIER 320

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           ++     G   +  ++ G   R  +  D+    L  L    DY+     D+VIEAV E +
Sbjct: 321 DAAACEAGRARVTDSLDGARARRLIDADRHATLLSQLATDTDYAALTGADLVIEAVFEDM 380

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LK  +F+ L+    P CILA+NTS +D+N +   T+  DR+IG HFFSPAHVM LLE++
Sbjct: 381 DLKHAVFAALDAHTRPDCILASNTSYLDINDIARATAQPDRVIGLHFFSPAHVMKLLELI 440

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
            T+R S + +     +GK ++K+ V  G C GF  NR    Y +    ++  G    +ID
Sbjct: 441 VTDRASDRALATGFALGKRLRKLTVPAGVCDGFIGNRILSSYRRDTDAILQDGATPSQID 500

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+R FG P+G F++ DLAG  ++ A  K              + D L ++GR G+  G+
Sbjct: 501 QAMRDFGFPMGIFEMQDLAGLDISWAMRKRRAATRDPSERYVDIADTLCEAGRFGRKTGR 560

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G Y YE G  P PDP V    EE  R S    G    S ++ EI+  IL  +  E   +L
Sbjct: 561 GWYLYEDGKTPIPDPEV----EEIARQSAAAAGITRRSFSDDEIISRILATMQREGEEIL 616

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWA 510
            E I  RASD+D   + G  FP +RGG ++ A
Sbjct: 617 NENIAERASDIDVVMINGYGFPRWRGGPMYMA 648


>gi|297623637|ref|YP_003705071.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
           radiovictrix DSM 17093]
 gi|297164817|gb|ADI14528.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
           radiovictrix DSM 17093]
          Length = 693

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 180/530 (33%), Positives = 280/530 (52%), Gaps = 21/530 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + I + E   LGL+D ++  + LL  +  +A  +A RR P  R   R       +
Sbjct: 154 LMLSGEPIGAREAAALGLVDELIEGD-LLAGAVAFAERVADRR-PLPRLSAR-----RAA 206

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              E +  AR +  + A  +      ++++E         G   E + F +      SR 
Sbjct: 207 PDPEAVAAARAELDRRAQGLLSPHFIVELVEAATERPFEEGTRLERERFLQARSSPQSRA 266

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+RA +KV  V       R VR+V V+G G MG GIA + +   + V L E ++
Sbjct: 267 LRHLFFAERAAAKVAGVGKE-TPTREVRRVGVVGAGTMGGGIAMSFLNAGVPVTLLEADA 325

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G+ T+ AN      +G+L+ ++    L  L   L+ S   + D++IEAV E + +
Sbjct: 326 GALERGLATVRANYEASARKGRLSGEEVAARLGRLTPTLEPSALAEADLIIEAVFEDMEV 385

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+++F  L+    P  ILATNTST+D+N +   TS  + ++G HFFSPA+VM L+EIVR 
Sbjct: 386 KKEVFGRLDALAKPGAILATNTSTLDVNEIAAATSRPEDVLGLHFFSPANVMKLVEIVRG 445

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           ERTSA+V+   + + K + KV VVVG C GF  NR    Y + A+ LV  G     +D A
Sbjct: 446 ERTSAEVLATALKLTKRLGKVGVVVGVCDGFVGNRMIHAYVREAQRLVEEGAAPHEVDGA 505

Query: 361 IRSFGLPIGPFQLLDLA----GYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           + +FGLP+GPF++ DLA    GY +    +K      PD      L+D +++ GR G+  
Sbjct: 506 MHAFGLPMGPFEMGDLAGLDIGYAIRQHRAKLAGAPKPD-----DLLDRIVERGRKGQKT 560

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
             G+Y Y +G K  P   V  +I+  R    +     P ++ ++EI + +L+ +VNE+ R
Sbjct: 561 KAGVYDYPEGRKGVPSAEVAALIDALRAERGVT----PRTLGQEEITKRLLYTLVNEAAR 616

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           +LEEG+  RA D+D     G  FP+YRGG +  AD  G   V   ++++ 
Sbjct: 617 ILEEGVAARAGDIDVIYRYGYGFPAYRGGPLHHADVQGLGNVLADIRRFG 666


>gi|257484703|ref|ZP_05638744.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. tabaci str. ATCC 11528]
 gi|422681888|ref|ZP_16740156.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. tabaci str. ATCC 11528]
 gi|331011230|gb|EGH91286.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. tabaci str. ATCC 11528]
          Length = 721

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 290/567 (51%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G +DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E +   H  LA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEASVGEHTFLASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +  +VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A+KG       SS
Sbjct: 694 -GALYQPTAKLREMASKGQSFFGQASS 719


>gi|85372891|ref|YP_456953.1| fatty oxidation complex subunit alpha [Erythrobacter litoralis
           HTCC2594]
 gi|84785974|gb|ABC62156.1| fatty oxidation complex, alpha subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 678

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/425 (35%), Positives = 232/425 (54%), Gaps = 14/425 (3%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            GV KE ++F  L+    S  + H FFA+RA +K+ NV D       ++KV VIG G MG
Sbjct: 248 EGVKKERELFTGLMSGTQSAAMRHYFFAERAANKIDNV-DPKTPLIDIQKVGVIGAGTMG 306

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
            GIA   +   I V + E+  + L +G   I  N      +G++  ++   A+ +L   L
Sbjct: 307 GGIAMNFLSAGIPVTILEMKQDALDRGTGVIAKNYERTAKKGRMKPEQVEQAMGLLNPTL 366

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY++  D D+VIEAV E++ +K+++F++L++      ILA+NTS ++++ + + T     
Sbjct: 367 DYADLADCDLVIEAVYENMDVKKEVFAKLDETVKQGAILASNTSYLNIDEIAQATKRPGY 426

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA+VM LLEIVR   T   V+L  M + K I KV VV G C GF  NR   P
Sbjct: 427 VLGLHFFSPANVMKLLEIVRGAETRDDVLLTSMKLAKKIGKVAVVAGVCDGFIGNRMLSP 486

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
             + A  L+  G   + +D  +  FG P+GPFQ+ DLAG  +             D S  
Sbjct: 487 RQKQANELIMEGAKYWEVDDVLLEFGFPMGPFQMADLAGIDIGWHR---------DPSKV 537

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
           + + + L  + R G+ NGKG Y Y++  +  P   V  II +  R      G +   +++
Sbjct: 538 TTIREALCAAERFGQKNGKGFYDYDEARQRTPSEEVQAIIADFARKE----GTEQRDISK 593

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
            EI E +L+P+VNE   +L+EG+  RASD+D   + G  +P Y GG +FWAD VG + + 
Sbjct: 594 DEIRERLLYPMVNEGAMILDEGMAQRASDIDVVWINGYGWPLYTGGPMFWADTVGLDTIV 653

Query: 520 TSLKK 524
             L+K
Sbjct: 654 AGLEK 658


>gi|374367960|ref|ZP_09626016.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
           OR16]
 gi|373100473|gb|EHP41538.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Cupriavidus basilensis
           OR16]
          Length = 693

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 173/534 (32%), Positives = 273/534 (51%), Gaps = 18/534 (3%)

Query: 15  KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQA 73
           ++GL D V     L   +  +   + A ++P  +     +K+ +     E+     R  A
Sbjct: 169 EMGLFDLVTDDAALRADAIAFVKQVNAEQRPLRKVRDLNEKVEAARGKPELFADFRRANA 228

Query: 74  KK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132
           +K    + P++   +  IE  +      G+  E K+F  L+    S    + FFA R   
Sbjct: 229 RKFRGFDAPEYN--IRCIEAAVNLPFDEGMKVERKLFLALMNGTQSAAQRYYFFASRQVW 286

Query: 133 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 192
            +P+V         V+KV +IG G MG GIA   +   + VV+ E   E L +G++TI A
Sbjct: 287 NLPDVP-ADTPTIDVKKVGIIGAGTMGGGIAMNLLNAGVPVVIVETAQEALDRGMRTIRA 345

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
           N     ++G++T    +  + +L   L+  +  D D+VIEAV E++ +K+ IF +L+K  
Sbjct: 346 NYDNTASKGRITAADVDKRMALLTPTLELGQLADADLVIEAVYENMDVKKDIFGKLDKIV 405

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
               ILATNTS +D+N +   TS  + +IG HFFSPA+VM LLE+VR ++TS  VI   M
Sbjct: 406 KRGAILATNTSALDVNEIAAATSRPESVIGLHFFSPANVMKLLEVVRGDKTSKPVIRTSM 465

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            + + I K+  +VG C GF  NR      + A+ LV  G   + ID  + +FG P+GPF 
Sbjct: 466 ELARKIGKIAALVGVCPGFVGNRMLAQRQREAQKLVLEGALPWDIDRVLYNFGFPMGPFA 525

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 432
           + DLAG  +     K         S  + L ++L +  R G+  G G Y Y+      P 
Sbjct: 526 MSDLAGLDLGWIREK---------SSSATLREILCEMDRRGQKTGAGYYDYDDKRNAIPS 576

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
               P++E+  R      G     V+E+EI+E  ++ ++NE  ++LEEG  +RASD+D  
Sbjct: 577 ----PVVEQIIRDFAARKGMTSRVVSEQEILERCVYTMINEGAKILEEGKAIRASDIDVV 632

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            V G  +P YRGG +F+AD +G + V  ++K +    G  FKP+R LE+   +G
Sbjct: 633 WVNGYGWPVYRGGPMFYADTIGLDKVLAAMKNFEATLGADFKPARLLEDLVAQG 686


>gi|426403796|ref|YP_007022767.1| fatty oxidation complex subunit alpha [Bdellovibrio bacteriovorus
           str. Tiberius]
 gi|425860464|gb|AFY01500.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
           str. Tiberius]
          Length = 717

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 176/537 (32%), Positives = 282/537 (52%), Gaps = 21/537 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA-----RRKPWIRSLHRTDK 55
           ++L  KS+ S++  KLGL+D VV +  L   S  WA +I A     RRK +         
Sbjct: 165 IILAGKSVNSKKALKLGLVDKVVHANLLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVI 224

Query: 56  LGSLSEAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELV 113
           L S      V K AR    K T  + P     L+VI++          L+ E + F +L 
Sbjct: 225 LESALGRSIVFKKAREGVLKATKGHYPAPLQALEVIQKTYGMSDRDAALRVEREGFCKLG 284

Query: 114 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 173
           + D S+ L+HVF+      K   VT + +KPR V+ + V+G G MG GIA       I V
Sbjct: 285 VTDISKNLIHVFYLTEMVKKQNGVTGVDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQV 344

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            +K++N++ L KG+K        LV R  + + +    + ++    DY+ FK++D+V+EA
Sbjct: 345 RMKDLNTDALGKGLKHASDLWMKLVKRKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEA 404

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           ++E + +KQK+  E      P  I+ATNTS++ +  + +     +   G HFF+P + MP
Sbjct: 405 IVEDMGVKQKVIGECAGQMRPDAIIATNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMP 464

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           L+E++R E+TS + I  +  + K + K+PVVV +  GF VNR   PY   A  L+  G+ 
Sbjct: 465 LIEVIRGEKTSDETIATIYELSKKMGKMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMS 524

Query: 354 VFRIDSA-IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
           +  +D   ++ FG+P+GPF+L+D  G  V     K F KAF +R   +  ++ L  SGR 
Sbjct: 525 IEFVDKVYVKEFGMPMGPFELMDEVGLDVCLKVLKIFKKAFGERIELAACMEALGNSGRL 584

Query: 413 GKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE-KEIVEMILFPV 470
           G+ NGKG YTY E G +   D +V   +            G+P +  + KE +E  +F +
Sbjct: 585 GRKNGKGFYTYGEDGKRGAVDQTVYAALGL----------GQPTNPYDGKECIERGVFAM 634

Query: 471 VNE-SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           +NE S  ++E+ IV    ++D A ++G  FP +RGG++ + D++G  YV   L  ++
Sbjct: 635 INECSLALVEDRIVETPHEVDLAMIMGTGFPPFRGGLMKYTDSIGTQYVADQLAMYA 691


>gi|422596046|ref|ZP_16670330.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|330986347|gb|EGH84450.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 721

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 289/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G +DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     H +LA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGEHTVLASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A+KG       SS
Sbjct: 694 -GALYQPTAKLREMASKGQSFFGQASS 719


>gi|334344251|ref|YP_004552803.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
 gi|334100873|gb|AEG48297.1| 3-hydroxybutyryl-CoA epimerase [Sphingobium chlorophenolicum L-1]
          Length = 690

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 170/535 (31%), Positives = 271/535 (50%), Gaps = 21/535 (3%)

Query: 15  KLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL-KLARLQA 73
           ++GL+D +   + L   +  +A  +   ++P ++   RT+KL       E+     +  A
Sbjct: 168 EMGLVDELAQGD-LRADAIAFARRVLEEKRPLLKVRDRTEKLDEARGKPEIFANFRKANA 226

Query: 74  KK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132
           +K      P+H   +  +E  +      G++ E ++F EL     S    HVFFA+R  +
Sbjct: 227 RKFRGFKAPEH--IIRCVEATLEKSFDEGMVYERQLFNELQSDSQSAAQRHVFFAERQAA 284

Query: 133 KVPNVT-DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 191
           KV  +  D    P  + KV VIG G MG GIA       I V + E   E L +G+  I 
Sbjct: 285 KVLGLAADTPTLP--IAKVGVIGAGTMGGGIAMNFANAGIPVTIVEAKQEALDRGLGIIR 342

Query: 192 ANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKA 251
            N      +G++  +  +  + +L G +   +  D D++IEAV E++ +K+++F  L+  
Sbjct: 343 GNYESTAKKGRMKAEDVDTRMGLLTGSVAMEDLADCDLIIEAVFENLDVKREVFGTLDAI 402

Query: 252 CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 311
             P  ILATNTS +D++ +   T   + + G HFFSPA+VM LLE+VRT+ TS ++++  
Sbjct: 403 ARPGAILATNTSYLDIDDIAAATERPESVCGLHFFSPANVMKLLEVVRTKDTSPEIVVTA 462

Query: 312 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPF 371
           M + K I K+ V+VGN  GF  NR     +  A  LV  G   + +D  +  FG  +G F
Sbjct: 463 MKLAKTIGKIGVLVGNGFGFVGNRILAARNAQADRLVLEGATPWTVDRVLYDFGFAMGHF 522

Query: 372 QLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP 431
           Q+ DL G  V       +++   + +  + + ++L + GR+G+    G Y Y+   K  P
Sbjct: 523 QMRDLVGLDVG------WNR---ETTSSANVREILNEMGRHGQKTKGGYYDYDDNRKQTP 573

Query: 432 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 491
            P  + +IE+      I    +  +V++ EI + ILF +VNE  R+L+EGI  RASD+D 
Sbjct: 574 SPIAMQVIEDFAAKQGI----ERRAVSDDEIHDRILFAMVNEGARILDEGIAARASDIDI 629

Query: 492 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
             V G  +P YRGG +FW D  G   V   LK     +G  F PS  +E  A +G
Sbjct: 630 VWVTGYGWPKYRGGPMFWGDLQGLPTVLEKLKTLEAAHGEAFTPSPLIERLAAEG 684


>gi|28870678|ref|NP_793297.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. tomato str. DC3000]
 gi|81730422|sp|Q87ZB2.1|FADB_PSESM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|28853926|gb|AAO56992.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 721

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 290/568 (51%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G++DA+V  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++  + G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAAIFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++
Sbjct: 585 NGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTAKLREMAANGQSFFGQASS 719


>gi|298714001|emb|CBJ27233.1| enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Ectocarpus siliculosus]
          Length = 719

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 186/575 (32%), Positives = 284/575 (49%), Gaps = 43/575 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV--TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           M+   K I + +  + GL+D VV  ++ +L++     A+  A RR P +       + G 
Sbjct: 153 MITTGKMIPAAKALEAGLVDHVVGASAPDLVEA----AVSFARRRLPQVAGGLDALRTGG 208

Query: 59  L---SEAREVLKLARLQAKKTAPNMPQHQ---ACLDVIEEGIVHGGY-SGVLKEAKVFKE 111
                    VL +    A K  P +   +   +C++ +       G  +G+ +E  +F  
Sbjct: 209 RLLKDPVPVVLAVCDAAAAKIGPPVRGAEPRWSCVEALRAAAAGDGLATGMAREGALFST 268

Query: 112 LVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNI 171
           L+    SR   H+F A+RA  ++P        P  V+ V VIG G MG+GIA A +    
Sbjct: 269 LIQSQQSRARRHLFLAERAAFRIPRTP---AAPPKVQSVGVIGAGTMGAGIAIAFLFAGF 325

Query: 172 YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 231
            V L +   E L KG+  ++  V     RGK+++  A     +L   L     KD DM  
Sbjct: 326 KVTLVDAKQENLDKGLAYLQRGVLSAARRGKISKKTAEATKALLNPALSIDATKDCDMT- 384

Query: 232 EAVIESVPLKQKIFSELEKAC----PPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHF 285
            AV E++ LK++        C    P  C   +NTST+D+  +  G  T     ++G HF
Sbjct: 385 -AVFENMGLKKRTLRSSSTRCVSHPPSSC---SNTSTLDIAPDCKGNHTEPSS-VMGMHF 439

Query: 286 FSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSAR 345
           FSPAH+MPL+E VR    S   I  +M   K +KKV V+VGNC GF  NR    Y+    
Sbjct: 440 FSPAHMMPLVECVRGADASPLTIAVVMGATKRLKKVGVLVGNCDGFVGNRMLKWYTAETE 499

Query: 346 LLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP---- 401
            ++  G     +D A+++FG+ +GP ++ D+AG  ++    KE  +   D + ++P    
Sbjct: 500 FMLEEGASPVEVDRAVKAFGMGMGPLEMSDVAGNDISYLIKKE--RGLLDPAKRNPHERY 557

Query: 402 --LVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
             L D L++ GR G+  GKG Y YEKGS KP P P V  +IE  R+ +    G +P  ++
Sbjct: 558 CSLGDKLVEVGRYGQKTGKGWYDYEKGSRKPLPSPEVAALIEAHRKET----GSRPRKIS 613

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
            +EIVE   + ++NE  R LEEGI     D+D   V G ++P +RGG +FWAD VGA  +
Sbjct: 614 PEEIVERCFYALINEGFRCLEEGIAEHPDDIDVVWVYGYAWPGWRGGPMFWADEVGARTL 673

Query: 519 YTSLKKWSQLYGN--FFKPSRFLEERATKGIPLSA 551
              + K+ +L  N   ++PS  L   A  G  +SA
Sbjct: 674 VRQMAKYQELLPNVSHWQPSPLLLRLAETGQTVSA 708


>gi|422605224|ref|ZP_16677238.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. mori str. 301020]
 gi|330888880|gb|EGH21541.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 721

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 289/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G +DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           +  + +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSFIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     H ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +  +VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A+KG       SS
Sbjct: 694 -GALYQPTAKLREMASKGQSFFGQASS 719


>gi|294010368|ref|YP_003543828.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
 gi|292673698|dbj|BAI95216.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingobium japonicum UT26S]
          Length = 689

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 182/545 (33%), Positives = 272/545 (49%), Gaps = 23/545 (4%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKLGSLSEAR 63
           + I + E   LGL+DAVV    L + +  +A  + A    KP IR   R D +       
Sbjct: 157 RQIKAAEALSLGLVDAVVDDAALAEEALAFARRVVADGGAKPRIRD--RADAIEGDRNRP 214

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
           E+         +         A +  +E  +      G+ KE  +F+ LV    S    H
Sbjct: 215 ELFTAFAAANARRFKGFVAPAAIIGAVEAAVTLPFDEGLAKETALFERLVASPESAAQRH 274

Query: 124 VFFAQRATSKVPNVTDIG--LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           VFFA+R  ++VP   DIG  +    +R V VIG G MG GI    +   I + L E   E
Sbjct: 275 VFFAEREAARVP---DIGPDISAIDIRSVGVIGAGTMGGGITMNFLNAGIPITLVETTQE 331

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +GI TI  N      +G++T  +    + ++   LD +   D D++IEAV ES+ +K
Sbjct: 332 ALDRGIATIRRNYETTAAKGRMTAAQVEQRMGLISPSLDLAALADADLIIEAVYESMDVK 391

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
             IF+ L++      ILA+NTS +DLN +   TS  + ++G HFFSPA+VM LLE+VR  
Sbjct: 392 TDIFARLDRIAKLGAILASNTSFLDLNRIAAATSRPEWVVGLHFFSPANVMRLLEVVRGA 451

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
            TS  V+   M + K I KV V+ G C GF  NR   P    A  ++  G  +  ID  +
Sbjct: 452 ATSKPVVATAMRLAKRIGKVAVLSGVCDGFIANRLLAPRGAQAEAMMLEGTPIAEIDRVL 511

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
             +G  +G FQ++DL G  V    + E       R+    LV     +GR G+  G G Y
Sbjct: 512 VDYGFAMGHFQMMDLVGLDVIGRNATE-------RTVMGDLV----AAGRLGQKRGAGYY 560

Query: 422 TYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
            Y++  + +P      +I+E      +     P S  E  ++  +L+PVVNE  ++LEEG
Sbjct: 561 DYDEKRRSRPSDVTGSLIKEVAAARGV--AHAPTSGDEA-LLARLLYPVVNEGAKILEEG 617

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 541
           I +RASD+D A+VLG ++P YRGG +FWAD VG + +   +++   ++G  F+P+  L  
Sbjct: 618 IALRASDIDIAAVLGYNWPVYRGGPLFWADQVGLDRIVAEMRRLEAVHGETFRPAPLLVR 677

Query: 542 RATKG 546
            A  G
Sbjct: 678 LAEAG 682


>gi|323499534|ref|ZP_08104504.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           sinaloensis DSM 21326]
 gi|323315407|gb|EGA68448.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           sinaloensis DSM 21326]
          Length = 707

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 174/551 (31%), Positives = 297/551 (53%), Gaps = 27/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DAVV    LL V++      + ++K   ++  +   + +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDAVVPDTILLDVAKSLIDKHSGKKKAKRQASTKEKLIANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P   A L+VI  G+  G   G  KEA+ F ELVM   S
Sbjct: 228 LGRKVIFEQAAKKTHEKTRGNYPAADAILEVIRFGLEKGFEKGQKKEAERFAELVMTPES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++         P+ V++ AV+GGGLMG+GI+   +    + V +K+
Sbjct: 288 KALRSIFFA---TTEMKKENGADADPKQVKRAAVLGGGLMGAGISHVSVAKAKVPVRIKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGK---LTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           V+++ +L  +K    N +   T+ K   +++ +  + +  L G +D++ F   D+VIEAV
Sbjct: 345 VSNDGVLNALKY---NYKLFETQRKRRIISKAQLQSKMLQLSGGIDFTNFNHTDIVIEAV 401

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQ + +++E+      I ATNTS++ +  + EK    + ++G H+FSP   MPL
Sbjct: 402 FEDLELKQTMVADIEENAKESTIFATNTSSLPIAQIAEKAKRPENVVGLHYFSPVEKMPL 461

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVD 353
           +E++  E TS + +  ++   +   K P+VV +  GF VNR   PY ++SA++L+S G  
Sbjct: 462 VEVIPHEGTSEEAVSTVVEFARKQGKTPIVVKDSAGFYVNRILAPYMNESAQILMS-GEP 520

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRN 412
           +  +D+A+ +FG P+GP  LLD  G  + A           +R FQ P V D LL  GR 
Sbjct: 521 IGHLDNALLNFGFPVGPITLLDEVGVDIGAKIMPILVNELGER-FQGPDVFDTLLNDGRK 579

Query: 413 GKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           G+ +GKG YTY KG K + D SV        +L  + P  K   + ++++    + P++N
Sbjct: 580 GRKSGKGFYTY-KGKKKEVDKSVY-------KLLGLSPESK---MAQQDMAMRCVLPMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + ++ YG+ 
Sbjct: 629 EAVRCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGVKKLVEIMNEHAEKYGDR 688

Query: 533 FKPSRFLEERA 543
           F P   L  RA
Sbjct: 689 FAPCDGLLTRA 699


>gi|42523321|ref|NP_968701.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
           HD100]
 gi|39575527|emb|CAE79694.1| fatty oxidation complex, alpha subunit [Bdellovibrio bacteriovorus
           HD100]
          Length = 717

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 175/537 (32%), Positives = 280/537 (52%), Gaps = 21/537 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA-----RRKPWIRSLHRTDK 55
           ++L  KS+ S++  K+GL+D VV    L   S  WA +I A     RRK +         
Sbjct: 165 IILAGKSVNSKKALKIGLVDKVVHPNLLESFSLKWAKEIIADGAKKRRKTFKPQGAVNVI 224

Query: 56  LGSLSEAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELV 113
           L S      V K AR    K T  + P     L+VI++          L+ E + F +L 
Sbjct: 225 LESALGRSIVFKKAREGVLKATKGHYPAPLQALEVIQKTYGMSDRDAALRIEREGFCKLG 284

Query: 114 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYV 173
           + D S+ L+HVF+      K   V  + +KPR V+ + V+G G MG GIA       I V
Sbjct: 285 VTDISKNLIHVFYLTEMVKKQNGVPGVDVKPRDVKGLGVLGAGTMGGGIAYVAADKGIQV 344

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            +K++N++ L KG+K        LV R  + + +    + ++    DY+ FK++D+V+EA
Sbjct: 345 RMKDLNTDALGKGLKHASDLWMKLVKRKSIDKYQFQQKMDLVSVSTDYAGFKNLDVVVEA 404

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           ++E + +KQK+  E      P  I+ATNTS++ +  + +     +   G HFF+P + MP
Sbjct: 405 IVEDMGIKQKVIGECAGQMRPDAIIATNTSSLSVTEMAKGHPRPEYFAGMHFFNPVNKMP 464

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           L+E++R E+TS + I  +  + K + K+PVVV +  GF VNR   PY   A  L+  G+ 
Sbjct: 465 LIEVIRGEKTSDETIATIYELSKKMGKMPVVVKDGPGFLVNRLLLPYMGEAAFLLQEGMS 524

Query: 354 VFRIDSA-IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
           +  +D   ++ FG+P+GPF+L+D  G  V     K F KAF +R   +P ++ L  SGR 
Sbjct: 525 IEFVDKVYVKEFGMPMGPFELMDEVGLDVCLKVLKIFKKAFGERIELAPCMEALGNSGRL 584

Query: 413 GKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPV 470
           G+ NGKG YTY E G +   D +V   +            G+P +    KE +E  +F +
Sbjct: 585 GRKNGKGFYTYSEDGKRGAVDQTVYAALGL----------GQPTNPYDSKECIERGVFAM 634

Query: 471 VNE-SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           +NE S  ++E+ IV    ++D A ++G  FP +RGG++ + D++G  YV   L  ++
Sbjct: 635 INECSLALVEDRIVETPHEVDLAMIMGTGFPPFRGGLMKYTDSIGTQYVADQLAMYA 691


>gi|17065148|gb|AAL32728.1| fatty acid multifunctional protein (AtMFP2) [Arabidopsis thaliana]
          Length = 404

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 131/232 (56%), Positives = 169/232 (72%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L SK + +EEG  LGLIDAVV   EL+  +R WALDI  RRKPW+ S+ +TDKL  L 
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLG 225

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           EARE+L  A+ Q  K APNM     CLD IE GIV G  +G+ KEA+V  ++V LDT++G
Sbjct: 226 EAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKG 285

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+HVFF+QR T+KVP VTD GL PR ++KVA+IGGGLMGSGIATA IL+N  V+LKEVN 
Sbjct: 286 LIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
           ++L  GI  ++AN++  V +G ++Q+K    + +LKG LDY  F+DVDMVIE
Sbjct: 346 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIE 397


>gi|440286759|ref|YP_007339524.1| 3-hydroxyacyl-CoA dehydrogenase; short chain enoyl-CoA hydratase
           [Enterobacteriaceae bacterium strain FGI 57]
 gi|440046281|gb|AGB77339.1| 3-hydroxyacyl-CoA dehydrogenase; short chain enoyl-CoA hydratase
           [Enterobacteriaceae bacterium strain FGI 57]
          Length = 716

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 176/562 (31%), Positives = 282/562 (50%), Gaps = 23/562 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + + +  K+GL+D VV    LL+     A+++A +     R L   +++ +  
Sbjct: 167 MILTGKQLRARQALKVGLVDDVVPQTILLEA----AVELAKQAPSRSRHLPVKERILAGP 222

Query: 61  EAREVL-KLA-RLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L  LA +   +KT  N P  +  L+VIE G+  G  SG   EA+ F ELVM   S
Sbjct: 223 LGRNILFTLAGKKTEQKTHGNYPATKKILEVIETGLAQGTSSGYDAEARAFGELVMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H+FFA     K P  +      R V  +     G   + +        + V +K++
Sbjct: 283 KALRHIFFASTEIKKDPGASVEAGPLRAVGILGGGLMGGGIAFVTATK--GKLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +  ++ ++ L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NAKGINHALKYSWELLDNKVRRRHIKANERDSQLALISGSTDYRGFAHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQK+ SE+E+ C PH I A+NTS++ +  +  +    +++IG HFFSP   MPL+E++
Sbjct: 401 ALKQKMVSEVEQQCAPHTIFASNTSSLPIGDIAAQAQRPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS Q I   + + K   K+P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHAATSEQTIATTVKLAKKQGKMPIVVADRAGFYVNRILAPYINEAMRMLTDGERIEDID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ DR F +P  L+  +L   R G+ N
Sbjct: 521 NALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGDR-FSAPATLISAILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y  KG  SK +PD ++  +     R S + P         ++I E  +  ++NE
Sbjct: 580 GRGFYLYGAKGRTSKKQPDSAIYSLPGMASRNSQLSP---------QQIAERCVLLMLNE 630

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E ++  A D D  +V G+ FP + GG   + D++GA  V   L++ +  YG  F
Sbjct: 631 AARCFDERVIRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVARLQRLTTQYGPRF 690

Query: 534 KPSRFLEERATKGIPLSAPVSS 555
            P   L   A +G    +PV +
Sbjct: 691 TPCEALVAMAERGETFWSPVET 712


>gi|422653054|ref|ZP_16715828.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|330966111|gb|EGH66371.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 721

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 173/568 (30%), Positives = 289/568 (50%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G++DAVV  E       +L++ S     D  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGVVDAVVAPEKLQAAALDLIQRSISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   +D L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++
Sbjct: 585 NGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTAKLREMAANGQSFFGQASS 719


>gi|262196642|ref|YP_003267851.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein [Haliangium
           ochraceum DSM 14365]
 gi|262079989|gb|ACY15958.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Haliangium
           ochraceum DSM 14365]
          Length = 752

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 188/579 (32%), Positives = 284/579 (49%), Gaps = 50/579 (8%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA----------------ARRK 44
           M+L  K + +++   LGL+D VV +  L + +R  AL +A                +R  
Sbjct: 169 MILTGKRLRAKKARALGLVDLVVPAAVLERAARQHALQLAEARAALRKQRAGKGALSRMA 228

Query: 45  PWIRSLHRTDKL-GSLSEAREVLKLARLQAK------------KTAPNMPQHQACLDVIE 91
             +R   R   L G L E   VL+  RL  K            KT  N P  +  L+ + 
Sbjct: 229 ATMREAVRGVNLSGDLQEL--VLEDNRLGRKVVFDTARKKLLAKTQGNYPAPEKALEAMR 286

Query: 92  EGIV--HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGL--KPRGV 147
            G      GY+    EA+ F EL +   +  L+ +F A  A  K   V+  G   +PR V
Sbjct: 287 LGAAKPEDGYAA---EARFFGELAVSPEANELIQIFLATTALKKDSGVSGQGAEARPRPV 343

Query: 148 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 206
           RKVA++G GLMG+GIA          V LK+ +   + +G++ +   V G + R +L+  
Sbjct: 344 RKVAMLGAGLMGAGIAYVSAAKAGAQVRLKDRDPASVGRGLRAVREIVDGQLKRKRLSAR 403

Query: 207 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266
           +    +  +    DYS F D D++IEAV E + LK++I +E+E AC P  I A+NTSTI 
Sbjct: 404 QRLELMNRVTPTTDYSGFGDADVIIEAVFEDLALKRRIVAEVEAACGPETIFASNTSTIP 463

Query: 267 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326
           +  + E ++  + +IG H+FSP   MPLLEI+ TE+T+  V    + +GK   K  +VV 
Sbjct: 464 IGRIAEASTRPETVIGMHYFSPVDKMPLLEIIVTEQTAPWVTATCVALGKAQGKTVIVVR 523

Query: 327 NCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATS 386
           +  GF  +R   PY   A  +++ GV V RID A+  FG P+GP +LLD  G  VA    
Sbjct: 524 DSVGFYTSRILGPYMNEAFHILAEGVSVERIDRALVDFGFPVGPVKLLDEVGVDVAHKAG 583

Query: 387 KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLS 446
               +AF +R    P ++ L+   R G+ N +G Y Y  G K   D SV  ++       
Sbjct: 584 TVMREAFGERMDAPPGMERLIDDERLGRKNQRGFYLY-GGKKKGVDDSVYELL------- 635

Query: 447 NIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGI 506
            + PG +       EI E     +VNE+     EG++  A D D  ++ G+ FP +RGG 
Sbjct: 636 GVAPGRE---TAADEIAERCALQMVNEAAHCFGEGVLRSARDGDIGAIFGLGFPPFRGGP 692

Query: 507 VFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 545
           + + DA+GA  V   L+  +  +G  F+P+  L   A K
Sbjct: 693 LRYVDALGAGVVVERLRALAGRFGKRFEPAPVLVAMADK 731


>gi|311278706|ref|YP_003940937.1| fatty acid oxidation complex subunit FadJ [Enterobacter cloacae
           SCF1]
 gi|308747901|gb|ADO47653.1| fatty acid oxidation complex, alpha subunit FadJ [Enterobacter
           cloacae SCF1]
          Length = 715

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 179/543 (32%), Positives = 284/543 (52%), Gaps = 26/543 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + + +  + GL+D VV    LL      A+++A + +P  R L   ++L +  
Sbjct: 167 MILTGKQLRARQALRAGLVDEVVPHSILLDA----AVEMAKKERPASRRLPVRERLLAGP 222

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            AR VL   + +   +KT  N P     L VIE G+ HG  SG   EA+ F EL M   S
Sbjct: 223 LARNVLFSLVGKKTEQKTQGNYPATGKILQVIETGLSHGISSGYEAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K P      L    +R  AV+GGGLMG GIA A      + V +K+
Sbjct: 283 KALRGIFFASTDVKKDPGAPVEALP---LRSAAVLGGGLMGGGIAFALASKAQLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +NS  +   +K     +   V R  L   + ++ + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 INSLGINHALKYSWELLDAKVRRRHLKAAERDSQMALISGTTDYRGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E+   PH I A+NTS++ +  +    +  +++IG HFFSP   MPL+E+
Sbjct: 400 LALKQQMVADVERQFAPHTIFASNTSSLPIGDIAAHAARAEQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS   +  ++ + + + K P+VV +  GF VNR   PY   A  +++ GV + +I
Sbjct: 460 IPHAGTSDATVATVVRLARQMGKTPIVVADKAGFYVNRILAPYINEAMRMLTEGVSIEQI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + A+ +R F +P  ++  +L   R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLENAYGER-FSAPANIISAILNDDRKGRK 578

Query: 416 NGKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y  KG  SK +PDP++           N++  G+  S+T+++I E  +  ++N
Sbjct: 579 NGRGFYLYGAKGRKSKKRPDPAIY----------NLIGNGQKSSLTDQQIAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           ES R  +E +V  A D D  +V G+ FP + GG   + D +GA  V  +L++ +  YG  
Sbjct: 629 ESARCFDEQVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGNVVATLQRLATQYGAR 688

Query: 533 FKP 535
           F P
Sbjct: 689 FAP 691


>gi|312882081|ref|ZP_07741831.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370217|gb|EFP97719.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 707

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 172/549 (31%), Positives = 284/549 (51%), Gaps = 23/549 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DAVV    LL+V++ +      + K   +   +   + +  
Sbjct: 168 LILTGKQLRAKKAKKLGIVDAVVPETILLEVAKSFVEKNTGKNKAKQKVSTKEKLIANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  +  +   +KT  N P   A L+VI  G+  G   G  KEA+ F ELVM   S
Sbjct: 228 LGRKVIFEQATKKTHEKTRGNYPAADAILEVIRFGLEKGFEQGQKKEAQRFGELVMTPES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIATAHILN-NIYVVL 175
           + L  +FFA     K     D+G +  P  + + AV+GGGLMG+GI+   +    + V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGSEASPTKIERAAVLGGGLMGAGISHVSVAKAKVPVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V+++ +L  ++           R  +++ +  + +  L G +D++ FK  D+VIEAV 
Sbjct: 343 KDVSNDGVLNAMQYNYKLFEKQKKRRIISKAQLQSQMLQLSGGVDFTRFKHTDIVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ + S++E+   P  I ATNTS++ +  + EK +  + ++G H+FSP   MPL+
Sbjct: 403 EDLELKQTMVSDVEQNAKPTAIFATNTSSLPIKQIAEKAARPENVVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++  E TSA+ +  ++   +   K P+VV +C GF VNR   PY   A  ++     + 
Sbjct: 463 EVIPHEGTSAETVATVVEFARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMANEPIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
            +D A+ +FG P+GP  LLD  G  + A           +R F+ P V D LL   R G+
Sbjct: 523 SLDKALLNFGFPVGPITLLDEVGVDIGAKIIPILVNELGER-FKGPDVFDKLLNDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY KG K + D SV        +L  + P  K    +EK++    + P++NE+
Sbjct: 582 KSGKGFYTY-KGKKKEVDKSVY-------KLLGLNPEAKQ---SEKDMALRCVLPMLNEA 630

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+    D D  ++ G+ FP + GG   + D +G   +   +   +  YG+ F 
Sbjct: 631 VRCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGLAKLVEIMNDHATQYGDRFA 690

Query: 535 PSRFLEERA 543
           P   L  RA
Sbjct: 691 PCDGLLTRA 699


>gi|288960821|ref|YP_003451161.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
 gi|288913129|dbj|BAI74617.1| 3-hydroxyacyl-CoA dehydrogenase [Azospirillum sp. B510]
          Length = 728

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/476 (32%), Positives = 251/476 (52%), Gaps = 16/476 (3%)

Query: 79  NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 138
            +P   AC+D +E+      + G+  E   F  L       GL H F A+R  + +  + 
Sbjct: 245 GLPAPVACVDCVEKAATLPFHEGLAFEHDCFTRLRGTAEFAGLRHAFLAERRAADIRGLP 304

Query: 139 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 198
           D G+KPR V+ VAVIG G MG GIA +     + V L E   E L +G+  I       +
Sbjct: 305 D-GIKPRPVKTVAVIGAGTMGGGIAMSLANAGLAVTLIEREQEALDRGLAIIRQTCESAL 363

Query: 199 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 258
            +G+LT ++A   L ++KG + Y   +  D+VIEAV E + +K+++F +++       +L
Sbjct: 364 RKGRLTAEEAAGRLDLIKGCVGYDPVRQADLVIEAVFEDLEVKRQVFEQIDAVARAGTVL 423

Query: 259 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 318
           ATNTS +DL+ +   T     ++G HFFSPAHVM LLE+VR   T+  V+   + + + I
Sbjct: 424 ATNTSMLDLDRIAGFTRRPQDVLGLHFFSPAHVMKLLEVVRGAATAPDVLATAIALARRI 483

Query: 319 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 378
            K  VV G C GF  NR   PY   A  L+  G    ++D AI  +G+ +GPF++ DLAG
Sbjct: 484 GKTSVVSGVCEGFIGNRILQPYLYQAGRLLDEGALPHQVDQAIERWGMAMGPFRVSDLAG 543

Query: 379 YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV--- 435
             + A    +     P+ +F     D ++  GR G+ +G+G Y Y   S+  P PS+   
Sbjct: 544 NDLGAGIRAQVMANRPELAFSGSF-DAVVAMGRFGQKSGRGWYDY-SASQRGPQPSMEVN 601

Query: 436 LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVL 495
             ++ E  RL     G +  ++ ++EI++ +L  +VNE  +VL +GI  RASD+D     
Sbjct: 602 AAVVAESGRL-----GLRRRTIADEEIIDRLLLALVNEGAKVLGDGIAQRASDIDVVYTA 656

Query: 496 GMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-----GNFFKPSRFLEERATKG 546
           G  FP +RGG +F AD  G   +  +++++++        +F++P+  L   A +G
Sbjct: 657 GYGFPRWRGGPMFAADRRGLADILGTMRRFAEAAPDPQDASFWQPAPLLRRLADRG 712


>gi|375131587|ref|YP_004993687.1| fatty oxidation complex, alpha subunit Fad [Vibrio furnissii NCTC
           11218]
 gi|315180761|gb|ADT87675.1| fatty oxidation complex, alpha subunit Fad [Vibrio furnissii NCTC
           11218]
          Length = 708

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 171/548 (31%), Positives = 290/548 (52%), Gaps = 21/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++ + +D   ++K  ++   +   +    
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHTVLLDVAKRF-IDENGKKKGKVKLTTKEKLMSQTG 226

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + ++   +KT  N P  +A L+VI+ G+  G  +G+  EAK F ELVM   S
Sbjct: 227 FGRKVIFDQASKKTEQKTRGNYPAAKAILEVIQHGLEKGMNAGLELEAKRFGELVMTPES 286

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K  N TD    P  V ++ V+GGGLMG+GI+   +    + V +K+
Sbjct: 287 KALRSIFFATTEMKK-ENGTDA--TPLTVNRIGVLGGGLMGAGISHVSVAKAKVPVRIKD 343

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +            R  L++ +    +  L G +D++ F   D+VIEAV E 
Sbjct: 344 VSNDGILNALNYNYKLFDKQRKRRILSKAQLQAQMSQLSGGIDFTSFNHTDVVIEAVFED 403

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +++E       I ATNTS++ ++ +  K +  + I+G H+FSP   MPL+E+
Sbjct: 404 LALKQNMVADIEANAKASTIFATNTSSLPIHHIAAKAARPENIVGLHYFSPVEKMPLVEV 463

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFR 356
           +  + TS + I  ++ + +   K P+VV +C GF VNR   PY ++SA++L++ G  +  
Sbjct: 464 IPHDTTSDETISTVVALARKQGKTPIVVKDCAGFYVNRILAPYMNESAQILMA-GEPIEN 522

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKA 415
           +D A+  FG P+GP  LLD  G  + A            R FQ P V D LL  GR G+ 
Sbjct: 523 LDRALLDFGFPVGPITLLDEVGVDIGAKIMPILVNELGPR-FQGPDVFDTLLNDGRKGRK 581

Query: 416 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           +GKG Y+Y+   K + D SV        +L  + P  K    ++++I    + P++NE+ 
Sbjct: 582 SGKGFYSYKGSKKKEVDKSVY-------KLLKLTPESK---FSDQDIALRCILPMLNEAV 631

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + ++ YG+ F P
Sbjct: 632 RCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDHIGMKKLVELMNQHAEKYGDRFAP 691

Query: 536 SRFLEERA 543
              L  RA
Sbjct: 692 CDGLLTRA 699


>gi|422657214|ref|ZP_16719656.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. lachrymans str. M302278]
 gi|331015789|gb|EGH95845.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. lachrymans str. M302278]
          Length = 721

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 289/568 (50%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G++DA+V  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAASFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHTGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++
Sbjct: 585 NGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTAKLREMAANGQSFFGQASS 719


>gi|260429999|ref|ZP_05783974.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
 gi|260418922|gb|EEX12177.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
          Length = 647

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 177/511 (34%), Positives = 265/511 (51%), Gaps = 30/511 (5%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVS-RLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
            + + + +  K GLIDAVV+  E   V+    ALD  A   P +        L  + EA 
Sbjct: 155 GRPMPAGKALKAGLIDAVVSDLERDAVAFARAALD--AELPPPVSQR----PLAPMPEA- 207

Query: 64  EVLKLARLQAKKTAPNMPQHQA---CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
              + AR +A +     P HQA    LD +     HG    +  E + F +L   D +  
Sbjct: 208 -FWQDARKRAAR-----PGHQAPLRALDSLRFATEHGFAEAMAHERETFLDLRGSDEAAA 261

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+RA  K   +   G++PR VR V VIGGG MG+GIA A     + ++L E + 
Sbjct: 262 LRHIFFAERAAPKPSALK--GIEPRPVRTVGVIGGGTMGAGIAGACREAGMEILLIERDD 319

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E + +G+  +     G V RGKL+++     +  ++G  DY+E  D D+VIEAV E + +
Sbjct: 320 EAVTRGLANVGKIFDGAVKRGKLSEEDRAGRMAGVRGSTDYAELADADLVIEAVFEEIGV 379

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ +F+EL + C    +LATNTS +D   + E      R IG HFFSPAH+M LLEIV T
Sbjct: 380 KRAVFAELGRVCRADAVLATNTSYLDPRAIAEGLPDPSRFIGLHFFSPAHIMKLLEIVPT 439

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             T+  V+     +G+ + K+PV  G C GF  NR    Y   A  LV  GV +  ID+A
Sbjct: 440 PDTAPDVLATGFALGRALNKMPVQAGICEGFIGNRILKRYRAEAEALVKQGVAIAEIDAA 499

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R +G  +GPF+  DL G  + A   +E  +A   ++    L D+L+++GR G+  G G 
Sbjct: 500 MRGYGFRMGPFEAQDLGGLDI-AFLQREGARA-EGQTMPETLGDILVRAGRKGQKTGGGW 557

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y +G + PKP  SV  ++ +  R+S         +++  EI + ++  +  E   +L 
Sbjct: 558 YDYAEGDRTPKPSASVAALLAD--RVSG------SAALSGPEIADRLVGAMAAEGAAILR 609

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWA 510
           EGI     D+D   V G  FP ++GG +F A
Sbjct: 610 EGIAQSPQDIDLVEVHGYGFPRWKGGPMFAA 640


>gi|260769022|ref|ZP_05877956.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           furnissii CIP 102972]
 gi|260617052|gb|EEX42237.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           furnissii CIP 102972]
          Length = 708

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 171/548 (31%), Positives = 290/548 (52%), Gaps = 21/548 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++ + +D   ++K  ++   +   +    
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHTVLLDVAKRF-IDENGKKKGKVKLTTKEKLMSQTG 226

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + ++   +KT  N P  +A L+VI+ G+  G  +G+  EAK F ELVM   S
Sbjct: 227 FGRKVIFDQASKKTEQKTRGNYPAAKAILEVIQHGLEKGMNAGLELEAKRFGELVMTPES 286

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K  N TD    P  V ++ V+GGGLMG+GI+   +    + V +K+
Sbjct: 287 KALRSIFFATTEMKK-ENGTDA--TPLTVNRIGVLGGGLMGAGISHVSVAKAKVPVRIKD 343

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +            R  L++ +    +  L G +D++ F   D+VIEAV E 
Sbjct: 344 VSNDGILNALNYNYKLFDKQRKRRILSKAQLQAQMSQLSGGIDFTSFNHTDVVIEAVFED 403

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +++E       I ATNTS++ ++ +  K +  + I+G H+FSP   MPL+E+
Sbjct: 404 LALKQSMVADIEANAKASTIFATNTSSLPIHHIAAKAARPENIVGLHYFSPVEKMPLVEV 463

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFR 356
           +  + TS + I  ++ + +   K P+VV +C GF VNR   PY ++SA++L++ G  +  
Sbjct: 464 IPHDTTSDETISTVVALARKQGKTPIVVKDCAGFYVNRILAPYMNESAQILMA-GEPIEN 522

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKA 415
           +D A+  FG P+GP  LLD  G  + A            R FQ P V D LL  GR G+ 
Sbjct: 523 LDRALLDFGFPVGPITLLDEVGVDIGAKIMPILVNELGPR-FQGPDVFDTLLNDGRKGRK 581

Query: 416 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           +GKG Y+Y+   K + D SV        +L  + P  K    ++++I    + P++NE+ 
Sbjct: 582 SGKGFYSYKGSKKKEVDKSVY-------KLLKLTPESK---FSDQDIALRCILPMLNEAV 631

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + ++ YG+ F P
Sbjct: 632 RCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDHIGMKKLVELMNQHAEKYGDRFAP 691

Query: 536 SRFLEERA 543
              L  RA
Sbjct: 692 CDGLLTRA 699


>gi|332286481|ref|YP_004418392.1| fatty oxidation complex subunit alpha [Pusillimonas sp. T7-7]
 gi|330430434|gb|AEC21768.1| fatty oxidation complex, alpha subunit [Pusillimonas sp. T7-7]
          Length = 696

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 177/546 (32%), Positives = 282/546 (51%), Gaps = 20/546 (3%)

Query: 8   ITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVL- 66
           +++E   +LGLID  V S +L   +  +A  +     P +R L   D   S S+  E   
Sbjct: 159 VSAERALELGLIDERVVSGKLEAAALDFARGVIDSSMP-VRRLSTLDCSFSDSDVFEAYT 217

Query: 67  -KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
             + R +    AP       C+  ++         G+ +E  +F EL     S+   H F
Sbjct: 218 ESVTRKRRGYIAP-----LRCIAAVQAAAELPFAKGMERERAMFLELAASFQSKAQRHAF 272

Query: 126 FAQRATSKVPNVTDIGLKPR----GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           FA+RA ++VP+ T   LK       V  V V+G G MG+GIA       I V+L E N++
Sbjct: 273 FAERAAARVPDAT---LKKETEVLSVDSVGVVGAGTMGTGIAMCFANVGIPVLLLETNAD 329

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L +G+ TI  N    + RG LTQ + +  + +++    Y +   VD+VIEAV E + +K
Sbjct: 330 NLERGVATIRKNYARTMDRGGLTQAEMDRRIALIRPSAVYEDLAQVDLVIEAVFEELGVK 389

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           Q +F  L++ C P  ILA+NTS ++++ + + T+  + ++G HFFSPA+VMPLLE VR  
Sbjct: 390 QMVFRMLDQVCKPGAILASNTSYLNIDAIADVTARPEYVLGMHFFSPANVMPLLENVRGA 449

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
           +T  QV    M VGK+I K PV+V  C GF  NR     ++ +  ++  G    +ID  +
Sbjct: 450 KTLPQVCAAAMKVGKVIGKTPVMVRVCDGFVGNRMLAKRTRESYFMLEEGATPQQIDRVL 509

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
             FG P+GPF + DLAG  V     +        R     ++D +   GR G+  G G Y
Sbjct: 510 YDFGFPMGPFAMSDLAGVDVGWLNRQSRLANLTSRERACDILDQVHALGRFGQKTGAGFY 569

Query: 422 TYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
            YE+      DP +  +I    +   I    +   + + EI+E  L+P++NE+ ++LEEG
Sbjct: 570 RYEEDRSRHVDPKIEELIVNHSKKRGI----ERRQIPDSEIIERCLYPMINEAAKLLEEG 625

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFLE 540
           IV R  D+D   + G  FP++ GG +F+AD +G   ++ ++ K+  ++G  ++KP+  LE
Sbjct: 626 IVDRPGDIDVVWLKGYGFPAFLGGPLFYADHIGLPVIHQAMLKYQAVHGEQYWKPAALLE 685

Query: 541 ERATKG 546
           +    G
Sbjct: 686 DLVRSG 691


>gi|213969024|ref|ZP_03397164.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
           tomato T1]
 gi|301385415|ref|ZP_07233833.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061389|ref|ZP_07252930.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. tomato K40]
 gi|213926323|gb|EEB59878.1| fatty oxidation complex, alpha subunit [Pseudomonas syringae pv.
           tomato T1]
          Length = 721

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 289/568 (50%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G++DA+V  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAASFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++
Sbjct: 585 NGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTAKLREMAANGQSFFGQASS 719


>gi|422589790|ref|ZP_16664450.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. morsprunorum str. M302280]
 gi|330876682|gb|EGH10831.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. morsprunorum str. M302280]
          Length = 721

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 289/568 (50%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G++DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   +D L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++
Sbjct: 585 NGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTAKLREMAANGQSFFGQASS 719


>gi|302129979|ref|ZP_07255969.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 721

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/568 (30%), Positives = 289/568 (50%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G++DA+V  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAASFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++
Sbjct: 585 NGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTAKLREMAANGQSFFGQASS 719


>gi|327267366|ref|XP_003218473.1| PREDICTED: peroxisomal bifunctional enzyme-like [Anolis
           carolinensis]
          Length = 729

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 184/566 (32%), Positives = 277/566 (48%), Gaps = 36/566 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + + + E  KLG++D VV    +     L          P    L    KL ++      
Sbjct: 161 RHVPATEALKLGILDEVVEENPIEAAINLAQRVTGQPLGPRRLCLKEVPKLPNM---EAF 217

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L  ARL+ KK A      Q C + +   +      G+ KE ++F  L+    S+ L + F
Sbjct: 218 LDEARLKVKKRANGQLSPQMCFEAVRASVYLPFAEGIQKEKQLFMYLLSSGQSKALQYAF 277

Query: 126 FAQRATSK--VPNVTDIGL-KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           FAQRA  K  +PN    G   P+ V+K AVIG G MG GI  + +   I VV  E + + 
Sbjct: 278 FAQRAMEKWVLPNGASWGTADPQPVKKAAVIGLGTMGRGIVASLLKAKIPVVALEQDKKQ 337

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-----LDYSEFKDVDMVIEAVIES 237
           L  G    +A V  L+ R  L   +  N  K  K +     LD+   KDVD+VIEAV E 
Sbjct: 338 LEVG----KAAVMALLEREALKMHQ--NGQKPKKPIVPHFTLDFGALKDVDLVIEAVFEE 391

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LK++IF +L   C P  +L TNTS +D++ +   T    ++IG HFFSPAH+M L+EI
Sbjct: 392 IALKKEIFHKLSVICKPEALLGTNTSYLDIDEIASVTDRPHKVIGIHFFSPAHIMKLVEI 451

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  ++TS   I   M++ K + K+ VVVGNC GF  NR    Y   A  L+  G     +
Sbjct: 452 IYGQQTSPSAIATAMSLAKSMGKIGVVVGNCFGFVGNRMLTHYYDQAYFLIEDGSTPEEV 511

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSK---EFDKAFP--------DRSFQSPLVDLL 406
           D  ++ FG  +GP ++ DLAG  V     K   +   A P        D    SP+ D+L
Sbjct: 512 DKVLQEFGFKMGPLRVGDLAGLDVGWRIRKGKGQTGDALPPGTPPRHRDGMRYSPIPDML 571

Query: 407 LKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 464
            + GR G+  GKG Y Y+K  G   +PDP +   + + RR  NI       ++++ EI+E
Sbjct: 572 CEMGRYGEKTGKGWYLYDKPGGKIAQPDPWLHGFLSDFRRTHNITAR----TISQDEILE 627

Query: 465 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 524
             L+ + NE  R+L +GI      +D   + G ++P + GG +F+   VG   V   L++
Sbjct: 628 RCLYSLANEGFRILSDGIASCPEAIDTIYINGYAWPRHTGGPMFYTSQVGLPKVLAKLQE 687

Query: 525 WSQLYGNF--FKPSRFLEERATKGIP 548
           +++   +    +PS FL++    G P
Sbjct: 688 YAEANPDIPSLQPSPFLQKLVALGSP 713


>gi|90408869|ref|ZP_01217009.1| fatty oxidation complex, alpha subunit [Psychromonas sp. CNPT3]
 gi|90310032|gb|EAS38177.1| fatty oxidation complex, alpha subunit [Psychromonas sp. CNPT3]
          Length = 722

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 167/567 (29%), Positives = 291/567 (51%), Gaps = 23/567 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL---------WALDIAARR--KPWIRS 49
           ++L +K I +++ ++L LIDAV  +++  +V            +  +I  +R  K  ++ 
Sbjct: 163 LILSAKLINAKKAYRLHLIDAVYDAQQKNQVDDFIDNIICGHAFKKNILKKRIQKKNVQG 222

Query: 50  LHRTDKLGSLSEAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKV 108
           L   +++G     R + K A+ +  +KT  + P     L  IE+ +       +L+E   
Sbjct: 223 LLDNNRIGQ----RLIFKKAQQKLLQKTKGHYPAPLLALKTIEKTLHLSIDEALLEEVNA 278

Query: 109 FKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 168
           F  +   + S+ L+ ++F Q A  K   V    + P+ V ++ V+G G+MG GIA     
Sbjct: 279 FASIASSEISKNLIQLYFTQDALKKESGVNADDISPKDVAQLGVLGAGVMGGGIAWLCSQ 338

Query: 169 NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 228
           N I V LK+++   L KG +T       +    K+T  +    +  + G + Y  FK +D
Sbjct: 339 NGIDVRLKDIDWNALNKGYQTASGYYAQMQKHRKITPAQIRFKMNKISGAVKYHGFKQID 398

Query: 229 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 288
            VIEAV+E + +K+ +  E+EK  P H I+A+NTS++ +  +       +  IG HFF+P
Sbjct: 399 FVIEAVVEKIEIKKTVLREVEKELPEHAIIASNTSSLSITEMATALDRPENFIGMHFFNP 458

Query: 289 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 348
            + MPL+EI+  E++S + I   + + K + K P+VV +C+GF +NR   P    A LL+
Sbjct: 459 VNRMPLVEIISGEKSSPETIACAVKLAKAMHKTPIVVADCSGFLINRILIPMLNEAALLL 518

Query: 349 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLK 408
             G  V  IDS I  FGLP+GPF L D  G  +A   +     ++ +R   + +++ + K
Sbjct: 519 QEGASVTEIDSIITEFGLPMGPFTLADEVGIDIAFHVASMLQGSYGERMKVADILEHVYK 578

Query: 409 SGRN-GKANGKGLYTY--EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEM 465
                GK +G G Y +  +K  KP+ + ++  I+   R   +        + T++ I++ 
Sbjct: 579 EHHFLGKKSGLGFYLHSPKKAHKPRYNSNLDIILTYYRAQHHQFQH----AFTQQTILDR 634

Query: 466 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 525
            +  +VNE+ R +EE +V  AS LD   +LG  FP++RGGI+ +AD  G   +  +L + 
Sbjct: 635 CMLIMVNEAARCIEENVVKNASYLDMGIILGAGFPAFRGGILKYADNRGLTEICETLTEL 694

Query: 526 SQLYGNFFKPSRFLEERATKGIPLSAP 552
           +  YGN F P+  L ++A +     +P
Sbjct: 695 ATKYGNRFTPAPLLLQKAQQNSLFYSP 721


>gi|393718288|ref|ZP_10338215.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingomonas echinoides ATCC
           14820]
          Length = 677

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 175/534 (32%), Positives = 272/534 (50%), Gaps = 33/534 (6%)

Query: 17  GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK- 75
           GLID +   + L   +  +A ++A   KP  R+    DK+   ++   V    +  AK+ 
Sbjct: 168 GLIDRIAGEDTLAADAIAFAREVA-DAKPLPRA---RDKVAQ-ADPEAVAAFKKENAKRF 222

Query: 76  ---TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132
               AP    + AC++   +G       G+  E + F +L+    S    H+FFA+R  +
Sbjct: 223 RGFDAP--AANIACVEKATDGSSFD--EGIAFERQEFMKLMFGVQSAAQRHIFFAERQAA 278

Query: 133 KVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 192
           K+  + D  +  R +++V VIG G MG GI+   +   I V + E+  E L +G   I  
Sbjct: 279 KIDGI-DPKIALREIKRVGVIGAGTMGGGISMNFLSAGIPVTIVEMAQEALDRGTGVIRK 337

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
           N      +G+L  ++   A+  L   LD+S   D D++IEAV E++ +K+ IF++L+   
Sbjct: 338 NYEASAAKGRLKPEQVEAAMGALTPTLDFSALADCDLIIEAVYENMDVKKDIFTKLDAIA 397

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
            P  ILA+NTS ++++ +   T     ++G HFFSPA+VM LLE+VR  +T   V+  +M
Sbjct: 398 KPGAILASNTSYLNIDEIASVTKRPGDVLGMHFFSPANVMKLLEVVRGAQTEDDVLATVM 457

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            + K I+KV VV G C GF  NR   P    A  L+  G    +ID    +FG+P+G FQ
Sbjct: 458 ALSKTIRKVAVVAGVCDGFIGNRMLKPRQVEAMKLLLEGATPEQIDKVHVAFGMPMGAFQ 517

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 432
           + DLAG  +             D +    + D L   GR G+  GKG Y Y++   P P 
Sbjct: 518 MSDLAGVDIGWHR---------DPTRIENIRDALAAEGRWGQKTGKGFYDYDEKRNPTPS 568

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
           P V  IIE+ R  SN+    +   ++++EIVE  L+ +VNE   +LEE +  RASD+D  
Sbjct: 569 PRVAEIIEDFRSKSNL----QKREISDEEIVEKTLYTMVNEGALILEEKMAQRASDIDVV 624

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            + G  +P YRGG +FWAD+ G   +   L+K        F  +  L+ +A  G
Sbjct: 625 WIYGYGWPVYRGGPMFWADSEGLKKIVAGLEKHG------FAVAELLKSKAESG 672


>gi|350544774|ref|ZP_08914321.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
           kirkii UZHbot1]
 gi|350527428|emb|CCD38107.1| Enoyl-CoA hydratase /Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Candidatus Burkholderia
           kirkii UZHbot1]
          Length = 609

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/531 (31%), Positives = 270/531 (50%), Gaps = 23/531 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M++    + SE+  +  L D +  ++ LL  +  +A   A R  P+ +     D+     
Sbjct: 73  MIVSGTPVPSEKLAQTALFDEIAEAD-LLAAAICFAGQAADRGGPYPKV---RDRKIEHP 128

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A   ++ AR      A + P    C+D IE+G+  G   G+         LV    SR 
Sbjct: 129 NAEGFIQFARNSVAAVAQHFPAPHECIDAIEKGVKEGFERGL--------ALVQTPESRA 180

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H FF +RA  K+ +V       R +  + V+G G MG GIA   +   + VVL E   
Sbjct: 181 LRHTFFGERAADKIADVPP-DTPVRKIGHIGVVGAGTMGGGIAMNFLNAGLPVVLLETKQ 239

Query: 181 EYLLKGIKTIEANVR--GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           + L +G+ TI  N      V +GKLTQ+K    + ++   L Y++    D+++EAV E +
Sbjct: 240 DALDRGLATIRRNYEDEAQVKKGKLTQEKVEERMALIHPTLSYADLAQADLIVEAVFEEL 299

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K+++F +L++   P  ILA+NTST+DLN +   T     +IG HFFSP +VM LLE V
Sbjct: 300 GVKEQVFRQLDEIAKPGAILASNTSTLDLNKIASFTKLPGDVIGMHFFSPTNVMKLLEAV 359

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E T+  V+  ++ + K I K  VV   C GF  NR    Y + A  ++  G    +ID
Sbjct: 360 RGEETAKNVLATVIQLAKKIGKTAVVADVCDGFIGNRMIEQYIRQALFMLEEGALPAQID 419

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            AI  FG  +GPF++ +LAG  +  A  K   +  P+  + S + D L + G  G+  G 
Sbjct: 420 RAIEQFGFAMGPFRMSNLAGNDIGWAIRKRRYREQPELHY-SRVADRLCEMGCFGQKTGA 478

Query: 419 GLYTYEKGSKPKPDPSVLP--IIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           G Y Y+ G +       LP  ++++     +   G     + ++EIVE ++  +VNE  +
Sbjct: 479 GWYDYQPGRR-----DALPSKLVDDMIVAYSKEQGAVRRRIGDEEIVERLVLSLVNEGAK 533

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
           +L+EGI  +ASD+D   + G  FP +RGG + +AD +G   V  +++K++Q
Sbjct: 534 ILDEGIAAKASDIDMVYLTGYGFPLWRGGPMLYADTIGLYNVERAMRKYAQ 584


>gi|46309503|ref|NP_996951.1| peroxisomal bifunctional enzyme [Danio rerio]
 gi|82185947|sp|Q6NYL3.1|ECHP_DANRE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
           Short=PBFE; Includes: RecName: Full=Enoyl-CoA
           hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|42542964|gb|AAH66545.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Danio rerio]
          Length = 718

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 185/569 (32%), Positives = 290/569 (50%), Gaps = 37/569 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++   + ++++E  KLG++D V T +   +V+  +AL      KP   S  R   L +  
Sbjct: 150 LITTGRHVSAQEALKLGMVDQV-TEQNTCEVALEFALKAVG--KPL--SSRRLSMLTTPC 204

Query: 61  EA--REVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDT 117
                 + + A +Q +K A  +    AC+  +    +   YS G+ +E ++   L     
Sbjct: 205 PPGLDGIFEAATMQVQKKARGVMAPLACVQAVRAATLP--YSEGIKREGELMATLFSSGQ 262

Query: 118 SRGLVHVFFAQRATSK--VPNVTDIG-LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 174
           ++ L + FFAQR   K  +P+       KPR ++  AVIG G MG GI  +  L  + + 
Sbjct: 263 AQALQYSFFAQRTAEKWTLPSGAQWNNSKPREIQSAAVIGLGTMGRGIVVS--LARVGIS 320

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +  V SE  L  ++T    V G++ R    +   + +L +LK  L   + KDVD+VIEAV
Sbjct: 321 VIAVESEKKL--LETGRQMVIGMLER-DAKRRGVSASLNLLKFSLSLQDLKDVDLVIEAV 377

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LK++IF EL + C P  +L +NTS +D++ + + T     + G HFFSPAHVM L
Sbjct: 378 FEDMALKKQIFRELSRVCRPATLLCSNTSGLDVDALADVTDRPQLVAGMHFFSPAHVMKL 437

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           LE+V   R+S + I   M++GK + KV V VGNC GF  NR   PY + A  L+  G   
Sbjct: 438 LEVVCGPRSSKEAIATAMSLGKRMGKVSVAVGNCPGFVGNRMLMPYLEQATFLLEEGATP 497

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE-------FDKAFPDRSFQ----SPLV 403
            +ID A+  FG  +G F++ DLAG  V     KE        D   P R  Q     P+ 
Sbjct: 498 QQIDKALEDFGFAMGVFRMSDLAGLDVGWRVRKESGLTGPDVDPKDPPRRRQGRKYCPIP 557

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D++ + GR G+  G+G Y Y+K   +  KPDP +  ++E  R    I    +P  +T++E
Sbjct: 558 DMVCQQGRFGQKTGRGWYMYDKPGDTNAKPDPLIQNLLETYRSRYGI----QPRKITDQE 613

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  LF + NE  R+L++ I  +  D+D   + G  FP +RGG +F+A  VG   V   
Sbjct: 614 IIERCLFALANEGFRILKDKIAGQPEDIDVIYLFGYGFPRHRGGPMFYASMVGLERVLER 673

Query: 522 LKKWSQLYGN--FFKPSRFLEERATKGIP 548
           L+ +     +    +PS  L++   +G P
Sbjct: 674 LEYYHHALPDVPHLEPSPLLKKLVARGSP 702


>gi|343503751|ref|ZP_08741559.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           ichthyoenteri ATCC 700023]
 gi|342814139|gb|EGU49090.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           ichthyoenteri ATCC 700023]
          Length = 704

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 175/548 (31%), Positives = 280/548 (51%), Gaps = 22/548 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K + +++  KLG++DA V    LL V++     +  + K   +   +   +    
Sbjct: 168 MMLTGKQLRAKKAHKLGVVDACVPLSILLDVAKQL---VEKKDKAKHKVTAKEKLMAQTG 224

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P  +A L VI  G+ HG   G+  EA+ F ELVM D S
Sbjct: 225 FGRKVIFEQAAKKTQQKTRGNYPATEAILAVIRHGLEHGLEKGLAYEAERFGELVMTDQS 284

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++        KP  V++VAV+GGGLMG+GI+   +    +   +K+
Sbjct: 285 KALRSIFFA---TTEMKKEHGSDAKPVQVKRVAVLGGGLMGAGISHVTVAKAKLPARIKD 341

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V+++ +L  +            R  L++ +    ++ L G  D+  F   D+VIEAV E 
Sbjct: 342 VSNDGVLNALNYNFKLFEKQRKRRILSKAQLQAKMQQLSGGTDFVSFNHTDVVIEAVFED 401

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +E+E       I ATNTS++ ++ + E+ +  + +IG H+FSP   MPL+E+
Sbjct: 402 LALKQQMVAEVETNAKSSTIFATNTSSLPIHQIAEQAARPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS + I  ++ + +   K P+VV +  GF VNR   PY   A  ++  G  + ++
Sbjct: 462 IPHHTTSDETISTVVELARKQGKTPIVVQDKAGFYVNRILAPYMNEAANILLTGEPIEQL 521

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKAN 416
           D A+   G P+GP  LLD  G  + A            R FQ P V D LL  GR G+ +
Sbjct: 522 DDALLDAGFPVGPITLLDEVGVDIGAKIMPILVSELGPR-FQGPAVFDTLLNDGRKGRKS 580

Query: 417 GKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           GKG YTY KG   + D SV        +L N+ P  K   ++ KEI    + P++NE+ R
Sbjct: 581 GKGFYTY-KGKDKQVDKSVY-------KLLNLTPESK---LSAKEIAMRCILPMLNEAVR 629

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+    D D  ++ G+ FP + GG   + D +G   +   + + +  YG  F P 
Sbjct: 630 CLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDQIGVVKLVEIMNEHAAKYGERFAPC 689

Query: 537 RFLEERAT 544
             L  RA+
Sbjct: 690 DGLLTRAS 697


>gi|206576247|ref|YP_002237269.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae 342]
 gi|254788651|sp|B5XVW2.1|FADJ_KLEP3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|206565305|gb|ACI07081.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
           342]
          Length = 714

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 181/556 (32%), Positives = 282/556 (50%), Gaps = 29/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  + + + +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQA----AVELALKGRPASRDMPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFHFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVL 175
           + L  +FFA     K     D G +  P  +  +AV+GGGLMG GIA        + V +
Sbjct: 283 QALRSIFFASTDLKK-----DRGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++    +   +K     +   V + +L   + +  + M+ G  DY  F   D+VIEAV 
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVF 397

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ SE+E+ C P  I A+NTS++ +  +  +     R+IG HFFSP   MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLV 457

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  V 
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNG 413
            ID A+  FG P+GP QLLD  G           + AF +R F SP  ++D +LK  R G
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSSPANIIDAILKDDRKG 576

Query: 414 KANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           + N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  +
Sbjct: 577 RKNNRGFYLYETKGRKSKKRPDPAVYPLLGIDRPQSRL---------SAQQVAERCVMMM 627

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  YG
Sbjct: 628 LNEAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYG 687

Query: 531 NFFKPSRFLEERATKG 546
             F P   L   A +G
Sbjct: 688 PRFTPCDTLLRMAEQG 703


>gi|152995606|ref|YP_001340441.1| multifunctional fatty acid oxidation complex subunit alpha
           [Marinomonas sp. MWYL1]
 gi|150836530|gb|ABR70506.1| fatty oxidation complex, alpha subunit FadB [Marinomonas sp. MWYL1]
          Length = 716

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 173/545 (31%), Positives = 268/545 (49%), Gaps = 24/545 (4%)

Query: 10  SEEGWKLGLIDAVVTSEELLKVSRLW-------ALDIAARRKPWIRSLHRT--DKLGSLS 60
           SE+ +K G +DAVV + ++ + +R          L+  ARR      +  T  +K+    
Sbjct: 176 SEDAFKDGAVDAVVPAAKVNESARHLIQQVLDGKLNYHARRDELRAPMEFTPIEKMMVFE 235

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             R V+        K   + P   A +  IE+GI       +  E K F +L     ++ 
Sbjct: 236 SVRGVV------GAKAGKHYPAPMAAIKTIEKGISQDMEKALDTEIKGFIKLAKGPVAKS 289

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LV++F + +   K          P  V++ AV+G G+MG G+A         +++K++  
Sbjct: 290 LVNLFLSDQQIKKTAGRYAKNATP--VKQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRP 347

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L  G+        G V RG+LT +KA  A+  +   L Y EF+ VD+V+EAV+E+V +
Sbjct: 348 EALELGLSEANKLFNGQVERGRLTTEKAFKAMNAIIPALSYGEFEHVDLVVEAVVENVKI 407

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K+ + +E+E       IL +NTSTI +  + +     +   G HFF+P H MPL+E++R 
Sbjct: 408 KKSVLAEVETKISDDAILTSNTSTISITELAKDLKRPENFCGMHFFNPVHRMPLVEVIRG 467

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           E+TS   I   +   + + K PVVV +C GF VNR  FPY     L++  G D   +D  
Sbjct: 468 EKTSDAAIAKTVAYAQAMGKTPVVVNDCPGFLVNRVLFPYFAGFSLMMQEGADFQVVDKT 527

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ--SPLVDLLLKSGRNGKANGK 418
           +  FG P+GP  LLD+ G   A    +   + FPDR     +  VD L +  R G+ NGK
Sbjct: 528 MEKFGWPMGPAYLLDVVGIDTAYHADQVMAEGFPDRMKHEGTNAVDCLFELERFGQKNGK 587

Query: 419 GLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVL 478
           G YTYE   K KP       I+    LS+I+     +S  E +IV  ++ P+  E+ R L
Sbjct: 588 GFYTYEPDRKGKPKKIFNEEIDVL--LSSIVVSKSELS--EDDIVARMMIPLCIETVRCL 643

Query: 479 EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRF 538
           EE IV  A++ D   + G+ FP Y GG + + D +G         K+S L G  ++P+  
Sbjct: 644 EENIVASAAEADMGLIYGIGFPPYLGGALHYLDQMGLQAFCDLADKYSHL-GKLYEPTAK 702

Query: 539 LEERA 543
           + E A
Sbjct: 703 MREMA 707


>gi|410092023|ref|ZP_11288566.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas viridiflava UASWS0038]
 gi|409760679|gb|EKN45806.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas viridiflava UASWS0038]
          Length = 715

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 285/559 (50%), Gaps = 38/559 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPEKLQAAALDLIKRAISGEFDFKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     +I    + V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGNRVDKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEAQVGENTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             VT+++I+  ++
Sbjct: 585 NGKGFYAYEMDKKGKPKKVNDPAVLDVLKPIVFEQRE------------VTDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCMETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAE 692

Query: 528 LYGNFFKPSRFLEERATKG 546
           L G  ++P+  L E A  G
Sbjct: 693 L-GALYQPTAKLREMARNG 710


>gi|443718591|gb|ELU09144.1| hypothetical protein CAPTEDRAFT_144302 [Capitella teleta]
          Length = 713

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 188/567 (33%), Positives = 289/567 (50%), Gaps = 38/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + I + + +KLG++D VV  + + +  + +A  IA   +P +    RT +   +      
Sbjct: 149 RHIGAAQAFKLGIVDKVVRGDAVEEAVK-FAKSIAG--EPLVD--RRTSQRPVMGAENAF 203

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR---GLV 122
           L  A   A K    M     CL V   G +     G+  EA    E V++ TS     L 
Sbjct: 204 LAAAVKLAMKKKKGMIAPIVCLSVSFMGSLLPFEQGIQVEAA---EAVVVFTSGQMGALQ 260

Query: 123 HVFFAQRATSK--VPNVTDI-GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
           + FFAQRA  K  +P       +K R +R  AVIG G MG+GI  A +   I V L E +
Sbjct: 261 YAFFAQRAAPKWLLPCGASFKTVKGRPIRNAAVIGAGTMGTGITMAMLNAGIPVTLVEQD 320

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            ++L KG+  ++    G V+  K+TQD+ +  L  L   + Y    +VD+VIEAV E++ 
Sbjct: 321 RKFLDKGVSLLKLLYAGSVSLRKITQDQCDAILSKLNTAVGYKSLTNVDLVIEAVYENMA 380

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           LK++IF+EL++ CPP   L TNTS +D++ +   T   D+++G HFF PA+ M LLE VR
Sbjct: 381 LKKQIFAELDRICPPETFLWTNTSALDIDEIASATRRPDKVLGTHFFVPAYHMKLLENVR 440

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + TSA+ +      G  I K+PVVVGNC GF  NR    Y   A  L+  G     +D 
Sbjct: 441 GKLTSAETVASAQMFGTRIGKIPVVVGNCHGFVGNRMLHKYVYEADFLIEEGCWPEDVDM 500

Query: 360 AIRSFGLPIGPFQLLDLAGYGV--------AAATSKEFDKAFPDRSFQSPLVDLLLKS-- 409
              +FGLP+GPF++ DL+G  +        A A   E + A   R      + LL KS  
Sbjct: 501 VAENFGLPLGPFKVRDLSGLDIRVRGLLEQAKAAGIEINPA--TRFLNGERISLLSKSLV 558

Query: 410 --GRNGKANGKGLYTYEK--GSKPKPDPSVLP-IIEECRRLSNIMPGGKPISVTEKEIVE 464
             G  G+  G+G Y Y K  G  P  D  +   I+E C        G +   V  +EI E
Sbjct: 559 DKGHCGRKTGRGFYNYGKPGGKIPLNDRFIKDVIVEYCAER-----GIERRKVAYQEIEE 613

Query: 465 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 524
            +  P++NE  ++LEEGI  +  D+D   +LG ++P + GG +++A+ VG + +Y  +  
Sbjct: 614 RLFLPLINEGFKILEEGIASKPEDIDTIWLLGYAWPRHTGGPMYYANMVGLDKIYNRICH 673

Query: 525 WSQLYGN--FFKPSRFLEERATKGIPL 549
           +++L+ +   ++PS  L++ A    P+
Sbjct: 674 YNELHKHSAHWQPSLLLKKLAASKTPM 700


>gi|422646817|ref|ZP_16709949.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. maculicola str. ES4326]
 gi|330960363|gb|EGH60623.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 721

 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 173/568 (30%), Positives = 286/568 (50%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G++DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
             L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 HSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F  VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGTVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   +D L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++
Sbjct: 585 NGKGFYAYETDKKGKPKKVNDPAVLEVLKPIVHEQRE------------VSDEDIVNWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVDTAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTAKLREMARNGQSFFGQASS 719


>gi|288934205|ref|YP_003438264.1| fatty acid oxidation complex subunit alpha FadJ [Klebsiella
           variicola At-22]
 gi|288888934|gb|ADC57252.1| fatty acid oxidation complex, alpha subunit FadJ [Klebsiella
           variicola At-22]
          Length = 714

 Score =  261 bits (667), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 180/556 (32%), Positives = 282/556 (50%), Gaps = 29/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  + + + +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQA----AVELALKGRPASRDMPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFHFVGKQTQRKTQGNYPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVL 175
           + L  +FFA     K     D G +  P  +  +AV+GGGLMG GIA        + V +
Sbjct: 283 QALRSIFFASTDLKK-----DRGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++    +   +K     +   V + +L   + +  + M+ G  DY  F   D+VIEAV 
Sbjct: 338 KDIQPRGINHALKYSWELLNKQVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVF 397

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ SE+E+ C P  I A+NTS++ +  +  +     R+IG HFFSP   MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLV 457

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  V 
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNG 413
            ID A+  FG P+GP QLLD  G           ++AF +R F  P  ++D +LK  R G
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVGIDTGTKIIPVLERAFGER-FSPPANIIDAILKDDRKG 576

Query: 414 KANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           + N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  +
Sbjct: 577 RKNNRGFYLYETKGRKSKKRPDPAVYPLLGIDRPQSRL---------SAQQVAERCVMMM 627

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  YG
Sbjct: 628 LNEAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYG 687

Query: 531 NFFKPSRFLEERATKG 546
             F P   L   A +G
Sbjct: 688 PRFTPCDTLLRMAEQG 703


>gi|320164233|gb|EFW41132.1| mitochondrial trifunctional protein [Capsaspora owczarzaki ATCC
           30864]
          Length = 771

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 190/577 (32%), Positives = 281/577 (48%), Gaps = 45/577 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS---------EELLKVSRLWALDIAARRKPWIRSLH 51
           MML  K++ +++  KLGLIDAVV S         +  LK     A+  A         + 
Sbjct: 203 MMLTGKNVRADKAKKLGLIDAVVQSMGPGIADPIDNTLKNLEREAVIAAKALAAGKLKVD 262

Query: 52  RTDKLGS-------LSEARE-----VLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGG 98
           R+  L S       L+E  E     VL+ AR    KKT  N P   A +DV+  G+  G 
Sbjct: 263 RSVPLLSVKGITKYLTEEVEYGRNFVLQKARETVLKKTQGNYPAPLAIIDVVRAGLAGGF 322

Query: 99  YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLM 158
            +G+  EAK F +L M D S+ L+ ++F Q A  K       G   R  + VAV+G GLM
Sbjct: 323 TNGLQAEAKAFGKLGMTDESKALIGLYFGQTALKK----NRYGAPERPTQNVAVLGAGLM 378

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G+GIA   I  N  V+LK++  E L +G   I  N+ G V R  LT  + +  +  +   
Sbjct: 379 GAGIAQVSIEKNYNVILKDMKPEGLARGQAQIYKNLDGKVKRKSLTSFERDQLVARVSPQ 438

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           L Y  F +VDMVIEAV E + LKQ+I  ++E   PPH I A+NTS + +  + + +S  D
Sbjct: 439 LTYQNFGEVDMVIEAVFEDLALKQRIIKDVEAVLPPHAIFASNTSALPIGEIAKASSRPD 498

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
           ++IG H+FSP   MPLLEI+ T++TS +     + VG    K  +VV +  GF   R   
Sbjct: 499 KVIGMHYFSPVDKMPLLEIITTDKTSKETAAAAVQVGLKQGKTVIVVKDGPGFYTTRILA 558

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
           P    A   ++ G+D F +D  ++ +G P+G   L D  G  V    S +   AF  R  
Sbjct: 559 PMLAEAITTLTEGIDFFHLDKVMQKYGFPVGSVTLADEVGIDVGYHVSHDLGAAFKHR-- 616

Query: 399 QSPLVD---LLLKS--GRN--GKANGKGLYTY--EKGSKPKPDPSVLPIIEECRRLSNIM 449
             P  +   L+LK    +N  G+ +GKG Y +   KG     +   + I  + +      
Sbjct: 617 MGPGAERAALVLKEMVDKNFLGRKSGKGCYIWSERKGKGKVINEDAVAIFRKYQT----- 671

Query: 450 PGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 509
               P +V ++E+   +   + NE+   L+EGI+    D D  +V G+ FP  +GG   W
Sbjct: 672 ---GPFTVPDEEVAFRLTGRMTNEAVYCLQEGILSSPVDGDIGAVFGLGFPPNKGGPFRW 728

Query: 510 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
            D+ GA      L++ +  YG+ F P+  L E A  G
Sbjct: 729 IDSYGAKNFVNRLEQLATKYGDHFAPAPLLIEHAKNG 765


>gi|328717308|ref|XP_001949325.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 760

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 183/567 (32%), Positives = 287/567 (50%), Gaps = 35/567 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVT---------SEELLKVSRLWALD----IAARRKPWI 47
           M L  KS  +++  K+GLID +VT         +E  L+     A+D    +AA  K   
Sbjct: 195 MALTGKSYRADKALKVGLIDQLVTPLGPGLSTPTERTLEYLEEIAIDAAKKLAAGHKLTK 254

Query: 48  RSLHRT--DKLGSLSEAREVLKLARLQAKK------TAPNMPQHQACLDVIEEGIVHGGY 99
           R+ ++T  DK+  L+  +E L+     + K      T    P     +DVI+ GI HG  
Sbjct: 255 RNKNKTLIDKVIDLALQQEWLREKFFDSAKGKVLKMTGGLYPAPLKIIDVIKTGIAHGTT 314

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            G   E+  F EL M   S+GL+ +F  Q    K       G     ++ V V+G GLMG
Sbjct: 315 KGYAAESNGFAELAMTPQSKGLIGLFQGQTECKK----NKFGEPKVALKTVGVLGAGLMG 370

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
           +GIA   +   + V+LK+ N E L KGI  IE  + G V R KLT  + +  +  L   L
Sbjct: 371 AGIAHVTVDKGLQVILKDTNKEGLAKGIAQIEKGLTGAVKRKKLTAIEKDRYVSDLTSTL 430

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
            Y  F   D+VIEAV E++ +K ++  ELE+  P HCI+ATNTS I +  + E +S  + 
Sbjct: 431 SYESFSKADIVIEAVFENIKIKHQVIKELEQVVPKHCIIATNTSAIPIGKISEGSSRPEN 490

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           +IG H+FSP   M LLEI+ T++TS +     +++G    K+ +VV +  GF   R    
Sbjct: 491 VIGMHYFSPVDKMQLLEIITTDKTSKETAAAAVSLGLKQGKIVIVVKDGPGFYTTRILST 550

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
               A  L+  GV+  ++D+  +SFG P+G   L D  G  V    + +  K F +R   
Sbjct: 551 MLSEAMRLLQEGVNPKQLDTITKSFGFPVGAATLSDEVGIDVGYHIATDLAKVFGERFSG 610

Query: 400 SPLVDL--LLKSGRNGKANGKGLYTYEKGSKPKPDPS-VLPIIEECRRLSNIMPGGKPIS 456
             L  L  ++ SG  G+ +GKG + Y+ G+K +P+ +  + ++E  +    + P G+  S
Sbjct: 611 GDLNVLKSMVDSGFLGRKSGKGYFVYKAGTKSRPENTEAISLLENFK----LQPIGEQ-S 665

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
           V  +++  +  F  VNE+   LEE I+   ++ D  +V G+ FP + GG   W D  GA+
Sbjct: 666 VENQQLRMVSRF--VNEAVLCLEESILNSPTEGDIGAVFGLGFPPFSGGPFRWVDWYGAD 723

Query: 517 YVYTSLKKWSQLYGNFFKPSRFLEERA 543
            + + ++ +   YG  FKP + L + A
Sbjct: 724 KLVSKMQTFQNDYGLPFKPCQLLLDHA 750


>gi|333899497|ref|YP_004473370.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
 gi|333114762|gb|AEF21276.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas fulva 12-X]
          Length = 692

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 243/466 (52%), Gaps = 10/466 (2%)

Query: 70  RLQAKKTAPNMPQHQA---CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 126
           R +A +    +P  +A    L  +E+       +G+  E +VF        +  L HVFF
Sbjct: 211 RERATQLLRKLPGQEAPPLALQALEQASRLSFEAGMAHEREVFIARRQSRQAHALRHVFF 270

Query: 127 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186
           A+R  +    V       R +  VAVIG G+MGSGIA       I  +L +   + L +G
Sbjct: 271 AERDLASRARVLGKRAPTRPIEAVAVIGAGMMGSGIALCLANAGIATLLVDTQEQALQRG 330

Query: 187 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 246
              +E   +GLV +GKL  D+A     +++           D++IEAV E + +KQ +F 
Sbjct: 331 RSVVEGYFQGLVEKGKLDADEAARRTSLIRYDATLESVAGADLIIEAVFEDLAVKQDVFR 390

Query: 247 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 306
           +L++   P  ILATNTS +D+  +   T+    ++G HFFSPA VM LLE+VRT + + +
Sbjct: 391 QLDQFAKPGAILATNTSYLDVTAIASATARPSDVVGMHFFSPAQVMKLLEVVRTPQVAPE 450

Query: 307 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 366
           V+  ++ +G  + K  + VGNC GF  NR      + A  L+  G     +D  IR FG 
Sbjct: 451 VLASVLQLGARLGKTSIAVGNCYGFVGNRLLAVREREAGFLLEEGASPQDVDRVIRGFGF 510

Query: 367 PIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKG 426
           P+GPF+L DL+G  +A    +  D +  +R  +  L++ L  +GR G+ +G G Y Y++G
Sbjct: 511 PMGPFELRDLSGVDIAWRNRQARDLSEAER--RCDLIEQLHAAGRLGQKSGAGYYRYQQG 568

Query: 427 SKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 485
            +    D  V  ++ E RR   I     P S+ ++EI++  LF ++NE+  +LE+GIV  
Sbjct: 569 QRRGVEDVFVSDLLAEHRRRRGI----TPRSIGDEEILQRCLFVMINEAAHLLEQGIVDS 624

Query: 486 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           A+D+D   + G  FP YRGG+++ AD VG   V  +L  W   +  
Sbjct: 625 ANDIDLVWLHGYGFPRYRGGLLYHADEVGLATVVGALDGWRAAFAQ 670


>gi|323454080|gb|EGB09950.1| hypothetical protein AURANDRAFT_22720 [Aureococcus anophagefferens]
          Length = 695

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 181/565 (32%), Positives = 287/565 (50%), Gaps = 42/565 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +M+  + ++++E   LG +DAVV   +L         +  A +      + RT K   + 
Sbjct: 150 IMVTGRQVSAKEALALGAVDAVVAKADL---------EAEAVKVVEASPVRRT-KAVLVD 199

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
             ++   +A+L+A+ T  N P+  + +  +E  + +    G+  E   F+EL     +  
Sbjct: 200 GFKDADSIAKLKARATL-NAPK--SIIQCVEAAVCNDMQDGLAFEEARFRELQGSTQANA 256

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRG---VRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           L H+FFA+RA SKVP     G+ P     V+   V+GGG MG GIA   + N + V + E
Sbjct: 257 LQHLFFAERACSKVP-----GVSPEDAVDVQAAGVVGGGTMGRGIAMCFVDNGLPVTILE 311

Query: 178 VNSEYLLKGIKTIEANVR--GLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            +++     I  +E   R      RG+LT++     L +L    D    KD D+V+EAV 
Sbjct: 312 TSADAAAAAISGVEETYRRSSAFKRGRLTEEALTAKLNLLSSASDVDALKDCDLVVEAVF 371

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +K+ IF++L++   P C+LA+NTST+ ++ +    +   R++G HFFSPA+VM LL
Sbjct: 372 EDMAVKRSIFADLDRVTKPSCVLASNTSTLSIDGIAGAVADPARVVGMHFFSPANVMRLL 431

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV---SLGV 352
           E VR  RT    +   M +GK ++K  V+ G+  GF  NR   PY +    L+   + G 
Sbjct: 432 ENVRGARTGPAAVATAMAMGKRLRKTTVLAGDDFGFIGNRMLEPYGRECLALLRHANCGP 491

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAG--YGVAAATSKEFDKAF---PDRSFQSPLVDLLL 407
           ++  +D+A+  +G+ +G FQ+ DLAG   G A  TS     A    P   + + + D L 
Sbjct: 492 EL--VDAALLEYGMAMGFFQMSDLAGNDIGYAVRTSLGLTDAASRDPAVEYSADVADALA 549

Query: 408 KSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           ++GR G+  G+G Y YE    P  DP+V  +I   +  S + P      VT  ++V+  L
Sbjct: 550 RAGRFGQKVGRGWYAYETPRVPSSDPAVAELIAGFKDAS-LAP-----DVTHGDVVDRAL 603

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW-ADAVGANYVYTSLKKWS 526
             + NE  RVLEEG+ +R SD+D     G  FP +RGG + W AD VG   V  +L    
Sbjct: 604 LALANEGFRVLEEGLALRPSDIDVVWTSGYGFPRHRGGPMQWAADDVGLAEVKATLDALH 663

Query: 527 QLYGN--FFKPSRFLEERATKGIPL 549
               +  + KP+R L + A  G  L
Sbjct: 664 AARPDVPYLKPARLLADMADAGAKL 688


>gi|89053167|ref|YP_508618.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Jannaschia sp. CCS1]
 gi|88862716|gb|ABD53593.1| 3-hydroxyacyl-CoA dehydrogenase [Jannaschia sp. CCS1]
          Length = 687

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 179/564 (31%), Positives = 281/564 (49%), Gaps = 45/564 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAV----------VTSEELLKVSRLWAL---DIAARRKPWI 47
           M+   K + ++     GL+ AV          V SEELL +   W L   D+ A      
Sbjct: 149 MIAYGKPLGAKAALATGLVHAVEEDPVDAADMVNSEELLCIVPTWELPAPDMNA------ 202

Query: 48  RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAK 107
                 D    + E      LA+    + AP        ++VIE G+       +  E  
Sbjct: 203 ------DAFAKIREG-----LAKRSKGQVAP-----LKAVEVIEAGLSMEFADAMALERA 246

Query: 108 VFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI 167
            F EL   D SR L H+FF++RA +K PN  D+   P  + K+A++GGG MG+GIA A +
Sbjct: 247 AFLELKAGDQSRALRHMFFSERA-AKAPN--DLPKAPE-ISKIAIVGGGTMGAGIAYACL 302

Query: 168 LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227
              + VVL E +++ + +    I+  +   + RG+L    A      L    DY+   D 
Sbjct: 303 SVGLPVVLLETDADAIARAQHNIDTLIGAGLKRGRLDDSGAAALRDRLTLTEDYAAASDA 362

Query: 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 287
            +VIEA  ES+ +K+ IF++L+ A  P  +LATNTS +D++++   T    RI+G HFF+
Sbjct: 363 TLVIEAAFESMDVKKDIFAKLDAAVSPDTVLATNTSYLDVDVLAASTRDPSRILGLHFFA 422

Query: 288 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLL 347
           PAH+M LLEIV    TS + +     + K++KKVPV+ G C GF  NR F  Y + A +L
Sbjct: 423 PAHIMRLLEIVTGAETSDRALATGYALAKLLKKVPVLAGVCDGFIGNRIFSRYKEEADIL 482

Query: 348 VSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF-PDRSFQSPLVDLL 406
           +  G   + +D A+ +FG  +GPF++ DL+G  +  A  +  D    P+R +  P+ D +
Sbjct: 483 LMDGAVPWEVDDAMEAFGYAMGPFEVGDLSGLDIGFANRRRQDATRDPNRRY-IPIADRM 541

Query: 407 LKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMI 466
           +  GR G+    G Y Y  G     DP +  +I E    +    G     + ++ +VE +
Sbjct: 542 VNEGRLGRKASVGWYRYPGGGGKVIDPLIEDLIAEEAHFA----GATRTEIADEVVVERL 597

Query: 467 LFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           L  ++NE+  +L EGI   A+D+D  +V G  FP +RGG++ +AD  G   +   L+   
Sbjct: 598 LLAMINEAADILGEGIARSAADIDLVTVFGYGFPRWRGGLMHYADTRGVAQIVEKLRSLE 657

Query: 527 QLYGNFFKPSRFLEERATKGIPLS 550
            +    +K S  L + A  G  L+
Sbjct: 658 AVDPVIWKVSPVLLDCAQTGTKLA 681


>gi|198426800|ref|XP_002125215.1| PREDICTED: similar to enoyl-Coenzyme A, hydratase/3-hydroxyacyl
           Coenzyme A [Ciona intestinalis]
          Length = 731

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 158/471 (33%), Positives = 251/471 (53%), Gaps = 21/471 (4%)

Query: 86  CLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDI-GL 142
           CL VI+   +     G+  E +    L+    SR  ++ FFA+R  SK  VP VT+    
Sbjct: 235 CLQVIKSSALLSYQEGLESERQGMFTLLASSQSRAQIYSFFAERQVSKWSVPGVTNYQNA 294

Query: 143 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK 202
            P  V+ V V+G G MG GIA   +       + E+N++    G+K I   +  +  R +
Sbjct: 295 VPMKVKAVGVVGLGTMGRGIAICCLRAGKITYVLEMNTKAQTAGVKYIRGYIETMRKRKQ 354

Query: 203 LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 262
           +   +++     L  V +Y+  K+VD+VIEAV ES+ +K++IF +LEK C P  ILA+NT
Sbjct: 355 INDQQSSMMNNALIPVDNYNGLKNVDLVIEAVFESMKIKKEIFKKLEKVCKPSAILASNT 414

Query: 263 STIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP 322
           ST++++ +   T    ++ G HFF+PAH+M LLE +R E++S + I  +M +GK ++K  
Sbjct: 415 STLNIDEMASVTKRPQKVAGMHFFAPAHIMMLLENIRGEKSSPETIATIMDLGKQMRKTT 474

Query: 323 VVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA 382
           V+VGNC GF  NR F  Y+  +  L+  G    ++D  +  +G  +G FQ+ DL+G  + 
Sbjct: 475 VLVGNCHGFVGNRMFAYYTAESSFLLEEGAYPKQVDDVLLDYGFAMGRFQVGDLSGTDIG 534

Query: 383 -------AATSKEFDKAFPDRS----FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP 431
                    T K+     P+R       SPL D L + GR G    KG Y YE    P P
Sbjct: 535 YKIRRERGLTHKQQPAGTPERKRGDRRYSPLDDFLYEKGRYGLKARKGWYKYEGSRTPIP 594

Query: 432 DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 491
           DP V  +I++ R+  NI     P  ++ +E ++ ++FP+VNE   VL+EGI     D+D 
Sbjct: 595 DPEVRKMIDDFRKRHNI----NPRHISPEETLQRMIFPLVNEGFNVLDEGIAANPWDIDM 650

Query: 492 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPSRFL 539
               G ++P + GG +++A  +G   V   +++  +L G     +KPS+ L
Sbjct: 651 IFQHGYAWPRHTGGPMYYAYTIGLPQVLKVIEERWKLAGASEPHWKPSKML 701


>gi|440723880|ref|ZP_20904233.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae BRIP34876]
 gi|440725354|ref|ZP_20905623.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae BRIP34881]
 gi|440358770|gb|ELP96107.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae BRIP34876]
 gi|440368817|gb|ELQ05838.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae BRIP34881]
          Length = 721

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 287/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P++ L E A KG       SS
Sbjct: 694 -GALYQPTKKLREMAAKGQSFFGQASS 719


>gi|300936924|ref|ZP_07151809.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           21-1]
 gi|432680960|ref|ZP_19916334.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE143]
 gi|300457963|gb|EFK21456.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           21-1]
 gi|431220357|gb|ELF17737.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE143]
          Length = 714

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 282/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V++K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVIIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K+P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|406596127|ref|YP_006747257.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii ATCC 27126]
 gi|406373448|gb|AFS36703.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii ATCC 27126]
          Length = 713

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 187/545 (34%), Positives = 280/545 (51%), Gaps = 21/545 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LG 57
           MML      +++  K G++D VV    LLKV+  +AL    +RKP   +  ++  DK L 
Sbjct: 172 MMLTGSPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227

Query: 58  SLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
                R ++ K AR     KT  N P     +DVIE G+  G  +G+  EA+ F +LVM 
Sbjct: 228 KTGPGRNMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMT 287

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVV 174
             S  L  +FFA     K   V   G+KP  ++KV V+GGGLMG GIA        + V 
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 345

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V +E +   +K     +   V +  +   +    L +L G LDYS ++D D+V+EAV
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAV 405

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++E+ C    I A+NTS+I +  +  K +  + +IG H+FSP   MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
            E++  ++TS QVI   +   K   K PVVV +  GF VNR   PY   A  L+  G  +
Sbjct: 466 AEVIAHDKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID ++  FG P+GP +LLD  G  V         +AF +R       D +L  GR GK
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            N KG Y+YE G KP  +     + E    L  + P  K   ++EKE+ E  +  ++NE+
Sbjct: 586 KNQKGFYSYE-GKKPGKE-----VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEA 636

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EG++  A D D  ++ G+ FP + GG   + D +G  +V   L  ++   G+ F 
Sbjct: 637 ARCLDEGVIRNARDGDIGAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFA 696

Query: 535 PSRFL 539
           P+  L
Sbjct: 697 PAEVL 701


>gi|237799446|ref|ZP_04587907.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022302|gb|EGI02359.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 721

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 171/567 (30%), Positives = 285/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   K     D     R V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 HSLIGLFLNDQELKKKAKGYD--KVARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   + + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYEADKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A  G       SS
Sbjct: 694 -GALYQPTAKLREMALNGQSFFGQASS 719


>gi|422299272|ref|ZP_16386845.1| fatty oxidation complex subunit alpha [Pseudomonas avellanae BPIC
           631]
 gi|407988879|gb|EKG31304.1| fatty oxidation complex subunit alpha [Pseudomonas avellanae BPIC
           631]
          Length = 721

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 171/568 (30%), Positives = 288/568 (50%), Gaps = 38/568 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K  ++E+  K+G++DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENSAEDALKVGVVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           + L+ +F   Q    K     ++    R V++ AV+G G+MG GIA    +    +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +K  + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E+
Sbjct: 405 PKVKPAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L+D+ G            + FPDR    +   +D L ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   K KP    DP+VL    PI+ E R             V++++I+  ++
Sbjct: 585 NGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692

Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
           L G  ++P+  L E A  G       SS
Sbjct: 693 L-GALYQPTEKLREMAANGQSFFGQASS 719


>gi|403049459|ref|ZP_10903943.1| 3-hydroxyacyl-CoA dehydrogenase [SAR86 cluster bacterium SAR86D]
          Length = 486

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 241/430 (56%), Gaps = 11/430 (2%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMG 159
           G+ +E ++F E ++      ++H+FF +R+ SK+ +V  D  +    V+K  +IG G MG
Sbjct: 55  GLKREGELFLECLLHPQREAMIHIFFGERSASKISDVPKDTPIMD--VKKAGIIGSGTMG 112

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
            GIA       I V + + +++ L +G+  IE N   +V +G++T ++ +    ++   L
Sbjct: 113 GGIAMCFANAGIPVHIIDQDADNLKRGLSVIEKNYDFMVNKGRMTAEQKDMVFGLITSSL 172

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY +  DVD+ IEAV E++ LK +IF  L++    + ILA+NTS +D++ +   T   ++
Sbjct: 173 DYKDLHDVDIAIEAVYENLDLKLEIFKSLDEHVQNNAILASNTSGLDVDAIASVTKRPNK 232

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA++M LLE+VR E+TS + +  +M + K IKK  VV  N  GF  NR  F 
Sbjct: 233 VVGTHFFSPANIMRLLEVVRGEQTSHETLATVMNISKKIKKAAVVSLNAPGFIGNRMLFN 292

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
           Y+  A +L+  G    +ID AI SFGL +GPF+++DL G  +     K      P     
Sbjct: 293 YTAQANMLLLEGALPHQIDQAIESFGLNMGPFRMMDLVGLDLGWRARKLSGAESP---LH 349

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
           + + D L  + R G+ NGKG Y Y +GS+ P P P    I E+    +    G     ++
Sbjct: 350 AKIGDYLCDNDRFGQKNGKGYYNYSEGSRAPNPAPENEAIYEKISSDN----GFTRRDIS 405

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           ++EI++  +  ++NE   +L EG+  RA+D+D   + G  FP +RGG +  A+A+G + V
Sbjct: 406 DEEILDRCILALINEGADILSEGVAQRAADIDVVYINGYGFPIWRGGPMHHANAMGLDVV 465

Query: 519 YTSLKKWSQL 528
              L+   +L
Sbjct: 466 VEKLRNIMKL 475


>gi|134297067|ref|YP_001120802.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia vietnamiensis G4]
 gi|134140224|gb|ABO55967.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Burkholderia vietnamiensis G4]
          Length = 711

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 180/547 (32%), Positives = 277/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D V  S++ L     +A ++ +   P +R       L   +
Sbjct: 162 LMLTGRHASAEEARALGLVDRVARSDDTLAEGLAYAQELVSLGAP-VRRTRDAQGLAERT 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  L  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 221 AAQAALAAARAELPKKSRGLFSPAKIVDAVEAALTLSFDAGMKLERSLFLQCLDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P         R V +V V+GGG MG+GIA A +   + V + E + 
Sbjct: 281 LVHAFFAEREAAKAPEARRA--SARAVERVGVVGGGTMGAGIAVAALDAGLPVTMIERDD 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E     LV +G++T D     +  L G   Y      D+VIEAV E + +
Sbjct: 339 ASLARGRAHVEKVYDALVAKGRMTPDARAARVARLDGSTRYDALAQADVVIEAVFEDMAV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 399 KQAVFAELARVCKPGAVLATNTSYLDIDALAAGIDRPTDVIGLHFFSPANVMKLLEIVVP 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           +R SA+V+     + + +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 459 KRVSAEVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+ +G+G 
Sbjct: 519 VRGFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKSGRGY 578

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+   R    I+P     S ++ EI+   L  ++NE   V+ 
Sbjct: 579 YLYPDGARVGTPDPEVDAIVAAERAKKGIVPR----SFSDDEILRRYLAAMINEGANVVH 634

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F++PS  L
Sbjct: 635 ERIALRPLDVDAVFLYGYGFPRHRGGPMHYADTVGLANVLADIRAFANEDPLFWRPSPLL 694

Query: 540 EERATKG 546
            E   +G
Sbjct: 695 VELVERG 701


>gi|455739751|ref|YP_007506017.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
 gi|455421314|gb|AGG31644.1| Enoyl-CoA hydratase [Morganella morganii subsp. morganii KT]
          Length = 716

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/558 (29%), Positives = 276/558 (49%), Gaps = 34/558 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  + + +++  K+ L D +V  + LL+ +   AL     ++  +    R +K+  L 
Sbjct: 171 MMLTGRQLRAKQAVKMRLADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLR 230

Query: 61  EAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +   + ++ R Q  +++  + P  +  +DV++ G+  G  +G   EA  F +L +   S 
Sbjct: 231 DI--IFRITRSQVHRRSGGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSG 288

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEV 178
            L H+FFA  A  K    +  G+KP  +  VAV+GGGLMG+GIA        + V +K+V
Sbjct: 289 ALRHLFFASTALKKE---SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDV 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           + E   K +     ++   V R +L+  +    +  + G  DY  F  +D V EAV ES+
Sbjct: 346 SQEGANKALAFFWQHLSKQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESL 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E    P  I A+NTS++ +  +  + S  +++IG H+FSPA  MPL EI+
Sbjct: 406 ALKQQMIAEIEAVTSPDTIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEII 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
             E T A  +   + + +   K  +VVG+  GF VNR   PY   A   ++ G    +ID
Sbjct: 466 PHEGTDAVTLATTLQLARRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+  FG PIGP  LLD  G  V        + AF +R    P +D L +  R G+ N +
Sbjct: 526 KALTDFGFPIGPVALLDEVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKR 585

Query: 419 GLYTYE---------KGSKPKPDPSVLPI----IEECRRLSNIMPGGKPISVTEKEIVEM 465
           G Y Y          + +  K D ++ P+    ++EC              +T +EI E 
Sbjct: 586 GFYDYTPLPWWKRCGRKAPRKADKAIYPLLGITVQEC--------------LTSQEITER 631

Query: 466 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 525
            L  ++NE+ R L+E ++   +D D  +V G+ FP + GG  ++ D++ A  +   L   
Sbjct: 632 CLMMMLNEAVRTLDEQVIRSPADGDAGAVFGIGFPPFLGGPFYYMDSMSAVVMTEKLTAL 691

Query: 526 SQLYGNFFKPSRFLEERA 543
           +  YG  F P   L++RA
Sbjct: 692 AARYGGRFTPCEALQQRA 709


>gi|290508408|ref|ZP_06547779.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
 gi|289777802|gb|EFD85799.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. 1_1_55]
          Length = 714

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 283/556 (50%), Gaps = 29/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  + + + +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQA----AVELALKGRPASRDMPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFHFVGKQTQRKTQGNYPAVKRILQVVENGLTHGCSSGYAEEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVL 175
           + L  +FFA     K     D G +  P  +  +AV+GGGLMG GIA        + V +
Sbjct: 283 QALRSIFFASTDLKK-----DRGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV 
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPSERDRQMALISGATDYQGFAHRDVVIEAVF 397

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ SE+E+ C P  I A+NTS++ +  +    S  +++IG HFFSP   MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAHASRPEQVIGLHFFSPVEKMPLV 457

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  V 
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNG 413
            ID A+  FG P+GP QLLD  G           + AF +R F  P  ++D++LK  R G
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDVILKDDRKG 576

Query: 414 KANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           + N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  +
Sbjct: 577 RKNNRGFYLYETKGRKSKKRPDPAVYPLLGIDRPQSRL---------SAQQVAERCVMMM 627

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  YG
Sbjct: 628 LNEAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYG 687

Query: 531 NFFKPSRFLEERATKG 546
             F P   L   A +G
Sbjct: 688 PRFTPCDTLLRMAEQG 703


>gi|421491873|ref|ZP_15939235.1| FADJ [Morganella morganii subsp. morganii KT]
 gi|400193633|gb|EJO26767.1| FADJ [Morganella morganii subsp. morganii KT]
          Length = 717

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/558 (29%), Positives = 276/558 (49%), Gaps = 34/558 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  + + +++  K+ L D +V  + LL+ +   AL     ++  +    R +K+  L 
Sbjct: 172 MMLTGRQLRAKQAVKMRLADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLR 231

Query: 61  EAREVLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +   + ++ R Q  +++  + P  +  +DV++ G+  G  +G   EA  F +L +   S 
Sbjct: 232 DI--IFRITRSQVHRRSGGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSG 289

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEV 178
            L H+FFA  A  K    +  G+KP  +  VAV+GGGLMG+GIA        + V +K+V
Sbjct: 290 ALRHLFFASTALKKE---SADGVKPAELHHVAVLGGGLMGAGIAAITRQRAGLPVRIKDV 346

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           + E   K +     ++   V R +L+  +    +  + G  DY  F  +D V EAV ES+
Sbjct: 347 SQEGANKALAFFWQHLSKQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESL 406

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E    P  I A+NTS++ +  +  + S  +++IG H+FSPA  MPL EI+
Sbjct: 407 ALKQQMIAEIEAVTSPDTIFASNTSSLPIRDIAARASRPEKVIGLHYFSPAEKMPLAEII 466

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
             E T A  +   + + +   K  +VVG+  GF VNR   PY   A   ++ G    +ID
Sbjct: 467 PHEGTDAVTLATTLQLARRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKID 526

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+  FG PIGP  LLD  G  V        + AF +R    P +D L +  R G+ N +
Sbjct: 527 KALTDFGFPIGPVALLDEVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKR 586

Query: 419 GLYTYE---------KGSKPKPDPSVLPI----IEECRRLSNIMPGGKPISVTEKEIVEM 465
           G Y Y          + +  K D ++ P+    ++EC              +T +EI E 
Sbjct: 587 GFYDYTPLPWWKRCGRKAPRKADKAIYPLLGITVQEC--------------LTSQEITER 632

Query: 466 ILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 525
            L  ++NE+ R L+E ++   +D D  +V G+ FP + GG  ++ D++ A  +   L   
Sbjct: 633 CLMMMLNEAVRTLDEQVIRSPADGDAGAVFGIGFPPFLGGPFYYMDSMSAVVMTEKLTAL 692

Query: 526 SQLYGNFFKPSRFLEERA 543
           +  YG  F P   L++RA
Sbjct: 693 AARYGGRFTPCEALQQRA 710


>gi|326916634|ref|XP_003204611.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
           [Meleagris gallopavo]
          Length = 770

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 173/568 (30%), Positives = 280/568 (49%), Gaps = 36/568 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           MML  ++I ++   K+GL+D +V             T E L +V+  +A  +A +     
Sbjct: 207 MMLTGRNIHADRAKKMGLVDQLVDPLGPGVKAPEARTIEYLEEVAIGFARGLANKTVSAK 266

Query: 48  RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGG 98
           RS     K+   + A   L   R Q  KT  +  Q Q           ++V++ G+  G 
Sbjct: 267 RSKGLVQKITDYAMA---LPFVRQQVYKTVESKVQKQTKGLYPAPLKIIEVVKAGLDQGR 323

Query: 99  YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLM 158
            +G L E++ F  L M + S+ L+ ++  Q    K       G   R V+ +AV+G GLM
Sbjct: 324 ETGYLTESQNFGHLAMTNESKALIGLYHGQVRCKK----NKFGAPQREVKTLAVLGAGLM 379

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G+GIA   +   +  +LK+   + L +G + +   + G V +  LT  + ++ L  + G 
Sbjct: 380 GAGIAQVSVDKGLKTILKDTTQQGLDRGQQQVFKGLNGKVKKKSLTSFERDSILSNMTGQ 439

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           LDY  F+  DMVIEAV E + +K K+  E+E   PPHCI A+NTS + +N +   +   D
Sbjct: 440 LDYKGFEKADMVIEAVFEDINIKHKVLKEVEAVIPPHCIFASNTSALPINQIAAVSQRPD 499

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
           ++IG H+FSP   M LLEI+ T++TS       + VG    KV +VV +  GF   R   
Sbjct: 500 KVIGMHYFSPVDKMQLLEIITTDKTSQDTAASAVAVGLKQGKVVIVVKDGPGFYTTRCLG 559

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-- 396
           P       ++  G+D  ++D+   +FG P+G   L+D  G  VA   +++  KAF +R  
Sbjct: 560 PMLAEVGRVLQEGIDPKKVDAISTAFGFPVGAATLIDEVGVDVATHVAEDLGKAFGERFG 619

Query: 397 SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS 456
                L  L+++ G  G+  GKG Y Y++G K +   S +  I     L+      KP  
Sbjct: 620 GGSIGLFKLMVQKGFLGRKAGKGFYIYQEGVKNRSLNSGMDEI-----LAQFKLPAKPEV 674

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
            T+++I   ++   VNE+   L+EGI+    + D  +V G+ FP   GG   +AD+ GA 
Sbjct: 675 CTDEDIQMRLVTRFVNEAAMCLQEGILSNPVEGDIGAVFGLGFPPCLGGPFRYADSYGAK 734

Query: 517 YVYTSLKKWSQLYGNFFKPSRFLEERAT 544
            +   L+K+  +YG+ F P + L + A 
Sbjct: 735 QLVDKLRKYEAVYGSQFTPCQLLLDYAN 762


>gi|301049101|ref|ZP_07196084.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           185-1]
 gi|300299102|gb|EFJ55487.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           185-1]
          Length = 714

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 177/555 (31%), Positives = 281/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +   +KT  N P  +  LDVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEQKTQGNYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|26248728|ref|NP_754768.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli CFT073]
 gi|227887400|ref|ZP_04005205.1| 3-hydroxybutyryl-CoA epimerase [Escherichia coli 83972]
 gi|300983688|ref|ZP_07176700.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           45-1]
 gi|386630138|ref|YP_006149858.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
           'clone D i2']
 gi|386635058|ref|YP_006154777.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
           'clone D i14']
 gi|386639910|ref|YP_006106708.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ABU
           83972]
 gi|422364998|ref|ZP_16445502.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           153-1]
 gi|432412549|ref|ZP_19655212.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE39]
 gi|432432626|ref|ZP_19675054.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE187]
 gi|432437109|ref|ZP_19679497.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE188]
 gi|432457447|ref|ZP_19699630.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE201]
 gi|432496445|ref|ZP_19738241.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE214]
 gi|432505186|ref|ZP_19746909.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE220]
 gi|432524581|ref|ZP_19761709.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE230]
 gi|432569418|ref|ZP_19805929.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE53]
 gi|432593603|ref|ZP_19829919.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE60]
 gi|432608272|ref|ZP_19844456.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE67]
 gi|432651912|ref|ZP_19887665.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE87]
 gi|432784303|ref|ZP_20018482.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE63]
 gi|432845340|ref|ZP_20078140.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE141]
 gi|432974487|ref|ZP_20163325.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE209]
 gi|432996092|ref|ZP_20184678.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE218]
 gi|433000661|ref|ZP_20189186.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE223]
 gi|433058857|ref|ZP_20245903.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE124]
 gi|433088018|ref|ZP_20274389.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE137]
 gi|433116272|ref|ZP_20302063.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE153]
 gi|433125941|ref|ZP_20311499.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE160]
 gi|433140011|ref|ZP_20325266.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE167]
 gi|433149927|ref|ZP_20334948.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE174]
 gi|433208511|ref|ZP_20392185.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE97]
 gi|433213294|ref|ZP_20396884.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE99]
 gi|442608119|ref|ZP_21022879.1| Enoyl-CoA hydratase [Escherichia coli Nissle 1917]
 gi|81475439|sp|Q8FFG4.1|FADJ_ECOL6 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|26109134|gb|AAN81336.1|AE016764_18 Putative fatty oxidation complex alpha subunit [Escherichia coli
           CFT073]
 gi|47600725|emb|CAE55846.1| putative fatty acid oxidation complex alpha subunit [Escherichia
           coli Nissle 1917]
 gi|227835750|gb|EEJ46216.1| 3-hydroxybutyryl-CoA epimerase [Escherichia coli 83972]
 gi|300408483|gb|EFJ92021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           45-1]
 gi|307554402|gb|ADN47177.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ABU
           83972]
 gi|315292298|gb|EFU51650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           153-1]
 gi|355421037|gb|AER85234.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
           'clone D i2']
 gi|355425957|gb|AER90153.1| multifunctional fatty acid oxidation complex [Escherichia coli str.
           'clone D i14']
 gi|430934956|gb|ELC55303.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE39]
 gi|430952367|gb|ELC71432.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE187]
 gi|430962440|gb|ELC80297.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE188]
 gi|430981740|gb|ELC98463.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE201]
 gi|431023703|gb|ELD36898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE214]
 gi|431037536|gb|ELD48512.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE220]
 gi|431051697|gb|ELD61360.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE230]
 gi|431099194|gb|ELE04493.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE53]
 gi|431127201|gb|ELE29510.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE60]
 gi|431137216|gb|ELE39063.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE67]
 gi|431189767|gb|ELE89184.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE87]
 gi|431328726|gb|ELG16030.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE63]
 gi|431394196|gb|ELG77732.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE141]
 gi|431488574|gb|ELH68206.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE209]
 gi|431505122|gb|ELH83744.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE218]
 gi|431508647|gb|ELH86919.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE223]
 gi|431569112|gb|ELI42074.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE124]
 gi|431604529|gb|ELI73938.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE137]
 gi|431634034|gb|ELJ02296.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE153]
 gi|431644591|gb|ELJ12252.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE160]
 gi|431659591|gb|ELJ26483.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE167]
 gi|431670596|gb|ELJ36949.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE174]
 gi|431729796|gb|ELJ93415.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE97]
 gi|431734319|gb|ELJ97720.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE99]
 gi|441710724|emb|CCQ08856.1| Enoyl-CoA hydratase [Escherichia coli Nissle 1917]
          Length = 714

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 177/555 (31%), Positives = 281/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +   +KT  N P  +  LDVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEQKTQGNYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|336251395|ref|YP_004595105.1| multifunctional fatty acid oxidation complex subunit alpha
           [Enterobacter aerogenes KCTC 2190]
 gi|334737451|gb|AEG99826.1| multifunctional fatty acid oxidation complex subunit alpha
           [Enterobacter aerogenes KCTC 2190]
          Length = 714

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 287/556 (51%), Gaps = 29/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K +   +  K GL+D VV    LL+     A+++A + +P  R++   +++ +  
Sbjct: 167 MILTGKQLRPRQALKAGLVDDVVPQSILLRT----AVELALQGRPASRTVPVRERVLAGP 222

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R++L   +A+   +KT  N P  +  L VIE G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRQLLFRMVAKKTRQKTQGNYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVL 175
           + L  +FFA     K     D G +  P  +  +AV+GGGLMG GIA        + V +
Sbjct: 283 QALRSIFFASTDLKK-----DRGAEADPAPLNSIAVLGGGLMGGGIAYVTACKGGLPVRI 337

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++ ++ +   ++     +   V R  L   + +  L ++ G  DY  F   D+VIEAV 
Sbjct: 338 KDIQAKGINHALRYSWELLDKQVRRRYLRASERDRQLALISGATDYHGFAHRDVVIEAVF 397

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++  E+E+ C P  I A+NTS++ +  +  + +  +++IG HFFSP   MPL+
Sbjct: 398 EDLALKQRMVGEIEQCCGPQTIFASNTSSLPIGEIAAQAARPEKVIGLHFFSPVEKMPLV 457

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    T  Q I  ++ + K+  K P+VV +  GF VNR   PY   A  L+  G  V 
Sbjct: 458 EVIPHATTDEQTIATVVKLAKLQGKTPIVVADRAGFYVNRILAPYINEAMRLLLEGEPVE 517

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNG 413
            ID+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G
Sbjct: 518 HIDNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLETAFGER-FSPPANIIDAILKDDRKG 576

Query: 414 KANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           + N +G Y YE   + SK + DP++ P+      L+   P  +   ++ +++ E  +  +
Sbjct: 577 RKNNRGFYLYETKRRKSKKRADPAIYPL------LAVASPQAR---LSAQQVAERCVMMM 627

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R  +E IV  A D D  +V G+ FP + GG   + D++GA  V   L++ +  YG
Sbjct: 628 LNEAARCFDEQIVRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVAAILQRLAAQYG 687

Query: 531 NFFKPSRFLEERATKG 546
             F P   L   A +G
Sbjct: 688 PRFSPCDTLLRMAEQG 703


>gi|390165886|ref|ZP_10218160.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
           B90A]
 gi|389591183|gb|EIM69157.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Sphingobium indicum
           B90A]
          Length = 689

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 162/448 (36%), Positives = 238/448 (53%), Gaps = 19/448 (4%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG--LKPRGVRKVAVIGGGLM 158
           G+ KE  +F+ LV    S    HVFFA+R  ++VP   DIG  +    +R V VIG G M
Sbjct: 252 GLAKETALFERLVASPESAAQRHVFFAEREAARVP---DIGPDISAIDIRSVGVIGAGTM 308

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G GI    +   I V L E + E L +GI TI  N      +G++T  +    + ++   
Sbjct: 309 GGGITMNFLNAGIPVTLVETSQEALDRGIATIRRNYEATAAKGRMTGAQVEQRMALISPS 368

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           LD +   D D++IEAV ES+ +K  IF+ L++      ILA+NTS +DLN +   TS  +
Sbjct: 369 LDLAALADADLIIEAVYESMDVKTDIFARLDRIAKAGTILASNTSFLDLNRIAAATSRPE 428

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
            ++G HFFSPA+VM LLE+VR   TS  V+   M + K I KV V+ G C GF  NR   
Sbjct: 429 WVVGLHFFSPANVMRLLEVVRGAATSKPVVATAMRLAKRIGKVAVLSGVCDGFIANRLLA 488

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
           P    A  ++  G  +  ID  +  +G  +G FQ++DL G  V    + E       R+ 
Sbjct: 489 PRGAQAEAMMLEGTPIAEIDRVLVDYGFAMGHFQMMDLVGLDVIGRNATE-------RTV 541

Query: 399 QSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
              LV     +GR G+  G G Y Y++  + +P      +I+E      +     P S  
Sbjct: 542 MGDLV----TAGRLGQKGGAGYYDYDEKRRSRPSDVTDSLIKEVAAARGV--AHAPTSGD 595

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           E  ++  +L+PVVNE  ++LEEGI +RASD+D A+VLG ++P YRGG +FWAD VG + +
Sbjct: 596 EA-LLARLLYPVVNEGAKILEEGIALRASDIDIAAVLGYNWPVYRGGPLFWADQVGLDRI 654

Query: 519 YTSLKKWSQLYGNFFKPSRFLEERATKG 546
              +++   ++G  F P+  L   A  G
Sbjct: 655 VVEMRRLEAVHGETFCPAPLLVRLAEAG 682


>gi|322786657|gb|EFZ13041.1| hypothetical protein SINV_01640 [Solenopsis invicta]
          Length = 696

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 182/568 (32%), Positives = 278/568 (48%), Gaps = 38/568 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           M+L  K++  ++  K+GL+D VV             T   L + +   A DIA  R    
Sbjct: 132 MVLTGKNLKPDKAKKVGLVDIVVNRLGPGVALPEENTIRYLEETAIKTAQDIANGRLKIA 191

Query: 48  RSLHR-----TDKLGSLSEAR-EVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYS 100
           R         T ++ S++  + +V K A+ Q  K    + P     L+V+  G+  G  +
Sbjct: 192 RGPKSLMDKITQQVLSINYVKDQVFKKAKAQVMKMTNGLYPAPLKILEVVRVGLDKGPVA 251

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G   EAK F +L      +GL ++FF Q A  K       G     V+K+AV+G GLMG+
Sbjct: 252 GFDAEAKGFGQLAATPECKGLTNLFFGQTACKK----NRFGAPKSTVKKIAVLGAGLMGA 307

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI    I     V++K+ N   L +G+  I+  +   V R +++    +  L  L   L 
Sbjct: 308 GIVQVSIDKGFDVIMKDTNEAGLYRGVNQIQKGLDTAVKRKRISSIVKDKYLSHLDATLK 367

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y  FKDVD+VIEAV E + +K K+  E+E   P HCI+ATNTS I +  +   +S  D++
Sbjct: 368 YDSFKDVDIVIEAVFEDIGIKHKVLKEIEAVVPNHCIIATNTSAIPITKIAAGSSRPDKL 427

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG H+FSP   M LLEI+  + TS + I   + VG    K  + VG+C GF   R     
Sbjct: 428 IGMHYFSPVDKMELLEIITHKGTSEETIKSAIDVGLKQGKTVITVGDCPGFYTTRILSTM 487

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
              A  L+  GVD   +D   ++FG P+G   L D  G  V A  S +  KA+ +R F+ 
Sbjct: 488 LSEAIRLLQEGVDPMHLDKLTKTFGFPVGAATLSDEVGIDVGAHISVDLAKAYGER-FKG 546

Query: 401 PLVDLL---LKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPIS 456
             V++L   +K+G  G+ +GKG++ YE  SK +  +   L I+++ +         +P  
Sbjct: 547 GDVNILSDMVKAGFLGRKSGKGIFVYETSSKNRDVNMGALDIMKKYKL--------EPKG 598

Query: 457 VTEKEIVEMILFP-VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGA 515
            T  E  +M L    VNE+   LEE I+    + D  +V G+ FP + GG   W DA GA
Sbjct: 599 STSDEDRQMRLVSRFVNEAVLCLEENILANPLEGDVGAVFGLGFPPFSGGPFRWVDAYGA 658

Query: 516 NYVYTSLKKWSQLYGNFFKPSRFLEERA 543
           + +   ++++   YG  F P + L E A
Sbjct: 659 HRLIKKMEEFQNHYGETFTPCQLLREHA 686


>gi|221135313|ref|ZP_03561616.1| multifunctional fatty acid oxidation complex subunit alpha
           [Glaciecola sp. HTCC2999]
          Length = 708

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 187/544 (34%), Positives = 280/544 (51%), Gaps = 19/544 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL-HRTDKLGSL 59
           MML   S+ +++  K G++DAVV    L+  +   AL    +RK   +SL +R   L + 
Sbjct: 168 MMLTGGSVRAKQAKKYGIVDAVVPRSILMAEAEKMALAGQPKRKAIKKSLVNRF--LENT 225

Query: 60  SEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           +  R +L  +  +   KKT  N P  +A L+ I+ G+  G  +G+  EA+ F ELVM   
Sbjct: 226 TVGRGILFSQAKKQLLKKTQGNYPAPEAILECIQTGLDKGLETGLNIEAQRFGELVMTPE 285

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLK 176
           SR L  +FFA     K   V D+      V KV V+GGGLMG GIA  +     + V +K
Sbjct: 286 SRALRSIFFATTEMKKESGVADV--PAEAVNKVGVLGGGLMGGGIAFVSATKAKVPVRIK 343

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           ++N++ +   + T    +   V R  L   +    L ++ G  DYS FKD DMVIEAV E
Sbjct: 344 DINAQGIKNAMNTAYGILHKRVKRRILRHSQMQQQLALITGTTDYSGFKDTDMVIEAVFE 403

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            V LKQ + +++E  C  + I A+NTS+I +  +  K +  + +IG H+FSP   MPL E
Sbjct: 404 DVGLKQAMVADVEANCRENTIFASNTSSIPIRQIAAKAARPENVIGLHYFSPVDKMPLAE 463

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVF 355
           ++  E TS + I + +   K   K P+VV +  GF VNR   PY S+SA ++++ G  + 
Sbjct: 464 VIAHEGTSDRTISNTVAFAKKQGKTPIVVKDGAGFYVNRILAPYMSESAEMILA-GEPID 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
            ID  +  FG P+GP +LLD  G  V           F DR       D +L+  R GK 
Sbjct: 523 NIDKTLVKFGFPVGPVKLLDEVGIDVGTKIIPILQADFGDRFAAPDAFDKVLQDDRKGKK 582

Query: 416 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           NGKG Y Y    K K       + E    L NI P      ++  EI++  ++ ++NE+ 
Sbjct: 583 NGKGFYDYSSKHKGK------VVDESIYSLLNIKPNSH---LSNDEIIQRSVYMMLNEAA 633

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R L+EG+V  A D D  ++ G+ FP + GG   + D +G + +   L  ++Q YGN F P
Sbjct: 634 RCLDEGVVRSARDGDIGAIFGIGFPPFLGGPFSYMDTIGISNLVERLDYFAQKYGNKFTP 693

Query: 536 SRFL 539
           +  L
Sbjct: 694 APIL 697


>gi|103488544|ref|YP_618105.1| 3-hydroxyacyl-CoA dehydrogenase [Sphingopyxis alaskensis RB2256]
 gi|98978621|gb|ABF54772.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Sphingopyxis alaskensis RB2256]
          Length = 677

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/425 (34%), Positives = 225/425 (52%), Gaps = 14/425 (3%)

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
            G+  E + F +L+    S    H+FFA+R  +K+  +     K R V+KV +IG G MG
Sbjct: 248 EGLAFEREQFMKLMFGSQSAAQRHIFFAERQAAKIDGLPK-DTKLRDVKKVGIIGAGTMG 306

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
            GI    +   I   + E+  + L +G+  +  N      +G+ T ++ +  + ++   L
Sbjct: 307 GGIMMNFLQKGIPCTIVEMAQDALDRGLGVVRKNYDASAAKGRFTPEQVDQMMGLITPSL 366

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
              +  D D++IEAV E++ +K+ IF +L+    P  ILA+NTS +D++ +   T+    
Sbjct: 367 SLDDLADCDLIIEAVYENMDVKKDIFGKLDTIAKPGAILASNTSYLDIDEIATATNRPGD 426

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           ++G HFFSPA+VM LLE+VR E+T+   +   M  GK I KV VV G C GF  NR   P
Sbjct: 427 VLGMHFFSPANVMKLLEVVRGEKTAPDALATAMATGKKIGKVAVVAGVCDGFIGNRMLKP 486

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
               A  L+  G    ++D     FG+P+GPFQ+ DLAG  +            P+R   
Sbjct: 487 RQMEAMKLLLEGATPAQVDKVHVDFGMPMGPFQMSDLAGVDIGWHRD-------PNRI-- 537

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
             + D L   GR G+    G Y Y++   P   P V  IIEE R+ + I    +   +T+
Sbjct: 538 ENIRDALCAEGRWGQKKQAGFYDYDEKRNPSESPRVAEIIEEFRKKAGI----EKREITD 593

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EI+E  L+P+VNE  R+LEEG   RASD+D   + G  +P YRGG +FWA   G + + 
Sbjct: 594 QEIIERTLYPMVNEGARILEEGKAQRASDIDVVWIYGYGWPVYRGGPMFWAGLEGTDKIV 653

Query: 520 TSLKK 524
            +L+K
Sbjct: 654 AALEK 658


>gi|432793556|ref|ZP_20027640.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE78]
 gi|432799514|ref|ZP_20033536.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE79]
 gi|431339219|gb|ELG26281.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE78]
 gi|431343380|gb|ELG30344.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE79]
          Length = 714

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 176/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  D++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPDQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|422633381|ref|ZP_16698525.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330943678|gb|EGH45982.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 721

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 286/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFKTAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A KG       SS
Sbjct: 694 -GALYQPTAKLREMAAKGQSFFGQASS 719


>gi|374368697|ref|ZP_09626743.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus basilensis OR16]
 gi|373099820|gb|EHP40895.1| 3-hydroxyacyl-CoA dehydrogenase [Cupriavidus basilensis OR16]
          Length = 752

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 176/570 (30%), Positives = 280/570 (49%), Gaps = 18/570 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + +E     G++DA+V  E L      +  D+  RR P  R    +  +  L 
Sbjct: 158 LMLSGRMLDAEAALAAGIVDALVPGEPL-AAGLNFLEDLLERRVPPRRLSTLSVPVAGLP 216

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                   A   A +     P   A +  +E         G   EA +    V    SR 
Sbjct: 217 PG--FFTQALQHATRERARYPAAAAIVQAVEAAASLPFAEGEAVEAALLAACVASPESRA 274

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L H+FFA+R  ++VP +   G+KPR +    V+G G MG  IA +     + V L E + 
Sbjct: 275 LRHLFFAERQAARVPRIPS-GIKPRALHTAGVVGAGTMGRRIAMSLADAGLPVTLVEASD 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L KG+  + A+       G+L  D     + ++ G LDY      ++VIEAV+E + L
Sbjct: 334 GALAKGLAAMRAHYEAGAAAGRLRPDAVAKRMGLIAGTLDYGALAGCELVIEAVVEDMAL 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ++ + L + C P  I+ATNTST+D+ ++ E +       G HF +PA+   L+E+VR 
Sbjct: 394 KQQVCARLGRICKPGAIIATNTSTLDVEVLAEASGRPGDFAGLHFRNPANGGRLIEVVRG 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
              +  V++  M + + + KV VV G C GF  NR    Y + +  L+  GV   R+D+ 
Sbjct: 454 SAIAPDVLVTAMDLARRLGKVAVVTGVCFGFIGNRMAEAYLRESEFLLMEGVSPARLDAV 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF---PDRSFQSPLVDLLLKSGRNGKANG 417
           ++++G+ +GP ++LDLAG    A    E+ KA    PD ++++ +V  L   GR G  +G
Sbjct: 514 MQAYGMAMGPCRMLDLAGIDTGAKIVLEYGKAGGLPPDPAYRA-VVRTLFMLGRLGCKSG 572

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
            G Y Y  G +P  DP    I     R   I+   +   + + EIVE ++FP++NE+ ++
Sbjct: 573 AGYYRYPDG-EPVADPEAERICAALGRAHGIV---RRTDIADAEIVERLMFPLINEAAKL 628

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFK 534
           LEEG+  R  D+D     G  FP Y GG V+ AD +G   +   L+++++L GN   ++ 
Sbjct: 629 LEEGMACRPGDIDMVWTAGYGFPDYLGGPVWQADCIGLPRIKAGLERYARLRGNPYDYWD 688

Query: 535 PSRFLEERATKGIPL---SAPVSSSSTSRA 561
            S  L   A  G  L   SAP S++  + A
Sbjct: 689 ISPLLAALARGGQRLSDWSAPTSAADAAPA 718


>gi|311109839|ref|YP_003982690.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
           xylosoxidans A8]
 gi|310764528|gb|ADP19975.1| fatty acid oxidation complex subunit alpha 3 [Achromobacter
           xylosoxidans A8]
          Length = 669

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 169/508 (33%), Positives = 261/508 (51%), Gaps = 24/508 (4%)

Query: 9   TSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDK----LGSLSEARE 64
           T+E   + GL+D VV  + LL+           R     RS+  T +    L   +E   
Sbjct: 146 TAERALQWGLVDEVV-EDGLLE-----------RAIAKARSMQGTKRDLLDLPMPAEEPS 193

Query: 65  VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHV 124
            ++ A  Q  +   + P     ++ I+         G+  E + F+EL +   + GL H 
Sbjct: 194 AIEAAERQVLRAGKHRPAVVTAIESIKNAARLPKQDGLQAERRYFQELRLTPDAFGLRHQ 253

Query: 125 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FFA+R + KVP +   G+ PR V+ VAVIG G MG+GIA + +   + V+L E +   L 
Sbjct: 254 FFAERESLKVPALA--GVAPRPVQTVAVIGAGTMGTGIAISALQAKLDVILLERDEAALQ 311

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           +G + I+A+    V  GK  Q +A+ +L  L   +D+++    D+VIEAV E + +KQ++
Sbjct: 312 RGHERIQAHYAQRVAAGKTDQAQADQSLARLSATVDWTQVARADLVIEAVFEQLEVKQEV 371

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F  +++   P  +LATNTS +D++ + + TS    ++G HFFSPA+VM LLE+VR   ++
Sbjct: 372 FRIIDRHARPGAVLATNTSYLDVDKIAQATSRPQDVLGLHFFSPANVMKLLEVVRGAHSA 431

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
             V+   M +GK + K PV+ GN  GF  NR +  Y Q   L++  G     +D A+  F
Sbjct: 432 PDVLATGMALGKRLGKSPVLCGNAFGFVGNRIYNVYRQQCELMLEDGAWPETVDQALEQF 491

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY- 423
           G  +GPF + DLAG  +  A  K        R     ++D L + GR G+  G G Y + 
Sbjct: 492 GFAMGPFSVGDLAGLDIPWAMRKSQAATRDSRVRYVDILDKLCELGRYGRKTGAGYYQHT 551

Query: 424 -EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGI 482
            +K +    D +V  IIE+  R   I    +   +  +EI    +  +VNE+  V+ EGI
Sbjct: 552 GDKTAGRTSDAAVRAIIEDASRRRGI----ERRELGAEEIQRRAMLALVNEAAWVMHEGI 607

Query: 483 VVRASDLDDASVLGMSFPSYRGGIVFWA 510
             RASD+D   VLG  FP + GG V WA
Sbjct: 608 ATRASDIDVVLVLGYGFPRWLGGPVHWA 635


>gi|331658515|ref|ZP_08359459.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA206]
 gi|331054180|gb|EGI26207.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA206]
          Length = 714

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 176/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAAKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSAGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
              RTSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHARTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|420251826|ref|ZP_14754984.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
 gi|398056833|gb|EJL48814.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia sp. BT03]
          Length = 706

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 283/552 (51%), Gaps = 8/552 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + ++E   LGL+D V  ++++L     +   +   + P +R     D L   +
Sbjct: 157 LMLSGRHVGAKEAHALGLVDLVGETDDVLAEGFAYVQALLDAQAP-VRRTRDADGLADRA 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +R  ++ AR +  K +  +      +D ++  +      G+  E ++F + +      G
Sbjct: 216 ASRANIEAARAETSKKSHGLFSPLKIVDAVQAALELPFDDGLRHERQLFLQCLDSPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H F A+R   K P   +   KPR +  V V+GGG MG+GIA A +   + V + E + 
Sbjct: 276 LIHAFLAEREVLKAPETRNA--KPRKIASVGVVGGGTMGAGIAVAVLDAGLPVTMIERDD 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G+  IE     L+ +G++T +     L    G   Y      D+VIEAV E + +
Sbjct: 334 VSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLARWNGSTSYDALGTADLVIEAVFEEMTV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K  +F++L++ C P  +LATNTS +D++ +    S    ++G HFFSPA++M LLE+V  
Sbjct: 394 KHAVFAKLDRVCKPGAVLATNTSYLDIDAIAASVSRPGDVVGLHFFSPANIMKLLEVVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K ++KVPV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 454 AQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRVLAIYRAAADHMMEDGASPYQIDRA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R+FG P+GPFQ+ DLAG  +  AT K        +     + D + + G  G+  G+G 
Sbjct: 514 VRAFGFPMGPFQVADLAGGDIGWATRKRRAATRDPQQRYVQIADRICERGWFGQKTGRGY 573

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  II+  R  + + P       +++EI+   +  ++NE   V+ 
Sbjct: 574 YVYADGARTGNPDPEVESIIDAERERAGVTPR----EFSDEEIMRRYMAAMINEGANVVH 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           + I +R  D+D   + G  FP +RGG + +AD VG + V   +++++Q    F++PS  +
Sbjct: 630 QRIALRPLDVDVTFLYGYGFPRHRGGPMQYADTVGLDKVLADIREFAQQDPVFWQPSPLI 689

Query: 540 EERATKGIPLSA 551
            +   +G  L++
Sbjct: 690 VDLVERGATLAS 701


>gi|407683075|ref|YP_006798249.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii str. 'English Channel 673']
 gi|407244686|gb|AFT73872.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii str. 'English Channel 673']
          Length = 713

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 187/545 (34%), Positives = 280/545 (51%), Gaps = 21/545 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LG 57
           MML      +++  K G++D VV    LLKV+  +AL    +RKP   +  ++  DK L 
Sbjct: 172 MMLTGSPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227

Query: 58  SLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
                R ++ K AR     KT  N P     +DVIE G+  G  +G+  EA+ F +LVM 
Sbjct: 228 KTGPGRNMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMT 287

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVV 174
             S  L  +FFA     K   V   G+KP  ++KV V+GGGLMG GIA        + V 
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 345

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V +E +   +K     +   V +  +   +    L +L G LDYS +++ D+V+EAV
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQNADIVVEAV 405

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++E+ C    I A+NTS+I +  +  K +  + +IG H+FSP   MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
            E++  +RTS QVI   +   K   K PVVV +  GF VNR   PY   A  L+  G  +
Sbjct: 466 AEVIAHDRTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID ++  FG P+GP +LLD  G  V         +AF +R       D +L  GR GK
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            N KG Y+YE G KP  +     + E    L  + P  K   ++EKE+ E  +  ++NE+
Sbjct: 586 KNQKGFYSYE-GKKPGKE-----VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEA 636

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EG++  A D D  ++ G+ FP + GG   + D +G  +V   L  ++   G+ F 
Sbjct: 637 ARCLDEGVIRSARDGDIGAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFA 696

Query: 535 PSRFL 539
           P+  L
Sbjct: 697 PAEVL 701


>gi|149633065|ref|XP_001508292.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
           [Ornithorhynchus anatinus]
          Length = 763

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 171/565 (30%), Positives = 282/565 (49%), Gaps = 30/565 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           MML  ++I ++   K+GL+D +V             T E L +V+  +A D+A ++    
Sbjct: 200 MMLTGRNIRADRAKKMGLVDQLVEPLGPGLKAPEERTIEYLEEVAVTFAKDLADKKVSAK 259

Query: 48  RSLHRTDKLGSLSEA-----REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSG 101
           ++    +K+ S +       +++ K    + +K    + P     +DV++ G+  G  +G
Sbjct: 260 KNKSLVEKVTSYAMTIPFVRQQIYKTVEEKVRKQTKGLYPAPLKIIDVVKTGLEEGNDAG 319

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSG 161
            L E++ F EL+M + S+ LV ++  Q    K       G   + V+ +A++G GLMG+G
Sbjct: 320 YLSESQKFGELIMTNESKALVGLYHGQVLCKK----NKFGAPQKDVKHLAILGAGLMGAG 375

Query: 162 IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221
           IA   +   +  +LK+     L +G + +   +   V +  LT  + ++    L G LDY
Sbjct: 376 IAQVSVDKGLKTILKDTTLTGLGRGQQQVFKGLNDKVKKKNLTSFERDSIFSTLTGQLDY 435

Query: 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRII 281
             F+  DMVIEAV E + +K K+  E+E   P HC+ A+NTS + +N +   +   +++I
Sbjct: 436 QGFEKADMVIEAVFEDLNIKHKVLKEVEAVIPAHCVFASNTSALPINEIAAVSKRPEKVI 495

Query: 282 GAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 341
           G H+FSP   M LLEI+ TE+TS       + VG    KV +VV +  GF   R   P  
Sbjct: 496 GMHYFSPVDKMQLLEIITTEKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMM 555

Query: 342 QSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-SFQS 400
                 +  GV+  ++DS   SFG P+G   L+D  G  VA   S+E  KAF +R    S
Sbjct: 556 SEVVRALQEGVEPKKLDSLTTSFGFPVGAATLVDEVGVDVAGHVSEELGKAFGERLGGGS 615

Query: 401 P-LVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
           P L+ L++  G  G+  GKG Y Y++G K +   S +  I     L+ +    +P   T+
Sbjct: 616 PELLKLMVNKGFLGRKAGKGFYIYQEGVKNRSLNSGMDEI-----LTQLRVSARPEVSTD 670

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           ++I   ++   VNE+   L+EGI+   ++ D  +V G+ FP   GG   + D  GA  + 
Sbjct: 671 EDIQYRLVTRFVNEAAMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFTDLYGARKLV 730

Query: 520 TSLKKWSQLYGNFFKPSRFLEERAT 544
             LKK+  +YG  F P + L + A 
Sbjct: 731 DRLKKYEDVYGKQFTPCQLLVDHAN 755


>gi|407793797|ref|ZP_11140828.1| multifunctional fatty acid oxidation complex subunit alpha
           [Idiomarina xiamenensis 10-D-4]
 gi|407213951|gb|EKE83802.1| multifunctional fatty acid oxidation complex subunit alpha
           [Idiomarina xiamenensis 10-D-4]
          Length = 705

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 185/550 (33%), Positives = 278/550 (50%), Gaps = 17/550 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K +  ++  K GL+D VV    LL+ ++  AL    RR     S       G+  
Sbjct: 165 MILTGKQLRPKQARKAGLVDDVVPRSILLEAAKQLALSSKPRRAKVKHSGINKLLEGTSI 224

Query: 61  EAREVLKLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
               + K A  QA+ K   N P   A +D I+ G   G   G+ +EA+ F  L M + SR
Sbjct: 225 GRNFIFKKAGEQAQAKAHGNYPAIDAIIDSIKVGQEQGFKEGLSREAEHFGRLAMTEQSR 284

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEV 178
            L H+FFA  A  K       G+KP  V +V V+GGGLMG GIA    +N      +K++
Sbjct: 285 QLRHIFFATTAMKKETGAD--GVKPEKVERVGVLGGGLMGGGIAYVSAVNAKAPTRIKDI 342

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             + +   +      +   V R  +T+++    +  L G LDY  F+  D+VIEAV E +
Sbjct: 343 AEKGIASALHYSYERLLKKVKRKHITRNELETTMLRLSGSLDYRGFERADIVIEAVFEDI 402

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQK+ +++E+    H I A+NTS++ +  +       +++IG H+FSP   MPL EI+
Sbjct: 403 ELKQKMVADIEQHAAQHTIFASNTSSLPITKIAANAQRPEQVIGLHYFSPVEKMPLAEII 462

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS + I   +   +   K P+VV +  GF VNR   PY   A  LV  G  + ++D
Sbjct: 463 THAGTSDKTIATTVAFARRQGKTPIVVKDGAGFYVNRILAPYMNEAARLVLAGEPIEKVD 522

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGKANG 417
            A+  FG P+GP +L+D  G  VAA  S        +R FQ+P     LL   R GK NG
Sbjct: 523 KALVKFGFPVGPMKLMDEVGIDVAAKVSPILAAELGER-FQAPQAFQRLLDDDRKGKKNG 581

Query: 418 KGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
           KG Y Y  K S  K D SV   +        + P G+   ++E++I    + P++NE+  
Sbjct: 582 KGFYAYGGKQSGKKVDDSVYKTL-------AVEPSGQ---LSEQQIAMRCVLPMLNEAVY 631

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            L+EGI+  A D D  ++ G+ FP +RGG   + D++G + V T L++W   +G  FKP+
Sbjct: 632 CLDEGIIRSARDGDIGAIFGIGFPPFRGGPFRYMDSLGIDTVLTQLQQWQSEHGEQFKPA 691

Query: 537 RFLEERATKG 546
             L++ A  G
Sbjct: 692 EKLQQMAAAG 701


>gi|387903389|ref|YP_006333728.1| enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
 gi|387578281|gb|AFJ86997.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Burkholderia sp. KJ006]
          Length = 711

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 179/547 (32%), Positives = 276/547 (50%), Gaps = 8/547 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +  ++EE   LGL+D V  S++ L     +A ++ +   P +R       L   +
Sbjct: 162 LMLTGRHASAEEARALGLVDRVARSDQTLAEGLAYAQELVSLGAP-VRRTRDAQGLAERT 220

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A+  L  AR +  K +  +      +D +E  +     +G+  E  +F + +      G
Sbjct: 221 AAQAALAAARAELPKKSRGLFSPAKIVDAVEAALTLSFDAGMKLERSLFLQCLDSPQRAG 280

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           LVH FFA+R  +K P         R V +V V+GGG MG+GIA A +   + V + E + 
Sbjct: 281 LVHAFFAEREAAKAPEARRA--SARAVERVGVVGGGTMGAGIAVAALDAGLPVTMIERDD 338

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G   +E     LV +G++T D     +    G   Y      D+VIEAV E + +
Sbjct: 339 ASLARGRAHVEKVYDALVAKGRMTPDARAARVARFDGSTRYDALAQADVVIEAVFEDMAV 398

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           KQ +F+EL + C P  +LATNTS +D++ +         +IG HFFSPA+VM LLEIV  
Sbjct: 399 KQAVFAELARVCKPGAVLATNTSYLDIDALAAGIDRPADVIGLHFFSPANVMKLLEIVVP 458

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
           +R SA+V+     + + +KK PV  G C GF  NR    Y  +A  L+  G   ++ID A
Sbjct: 459 KRVSAEVVATAFALARQLKKTPVRAGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDRA 518

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R FG P+GPFQ++DLAG  +  AT K        R+    + D L + G  G+ +G+G 
Sbjct: 519 VRDFGFPMGPFQVVDLAGGDIGWATRKRRAATRDPRARYVEISDRLCERGWFGQKSGRGY 578

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++   PDP V  I+   R    I+P     S ++ EI+   L  ++NE   V+ 
Sbjct: 579 YLYPDGARVGTPDPEVDAIVAAERAKKGIVPR----SFSDDEILRRYLAAMINEGANVVH 634

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           E I +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F++PS  L
Sbjct: 635 ERIALRPLDVDAVFLYGYGFPRHRGGPMHYADTVGLANVLADIRAFANEDPLFWRPSPLL 694

Query: 540 EERATKG 546
            E   +G
Sbjct: 695 VELVERG 701


>gi|332818623|ref|XP_003310203.1| PREDICTED: peroxisomal bifunctional enzyme [Pan troglodytes]
          Length = 627

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 178/569 (31%), Positives = 287/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 60  RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI-- 116

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 117 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 169

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 170 RALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 229

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 230 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVF 287

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 288 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 347

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 348 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 407

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 408 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIP 466

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ E
Sbjct: 467 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETHHI----EPRTISQDE 522

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 523 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 582

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 583 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 611


>gi|383189174|ref|YP_005199302.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
           78.65 = ATCC 33071]
 gi|371587432|gb|AEX51162.1| fatty oxidation complex, alpha subunit FadJ [Rahnella aquatilis CIP
           78.65 = ATCC 33071]
          Length = 734

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 189/551 (34%), Positives = 286/551 (51%), Gaps = 19/551 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +SI +++  ++GL+D  V    LL+     AL+  A+ +     L    +L    
Sbjct: 182 LMLTGRSIRAKQALRMGLVDDAVPYSVLLQT----ALERVAKGRKSRPPLPWQARLAGGP 237

Query: 61  EAREVL-KLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             + VL    R QA+ KT  N P  +  +DV+  G+  G  +G   EA  F ELVM   S
Sbjct: 238 LGKSVLFHFVRKQARAKTHGNYPATEKIIDVVRTGLDQGSGNGYQAEANAFGELVMTPES 297

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
             L  +FFA  A  K         +P  VR+V ++GGGLMG GIA    I   + V +K+
Sbjct: 298 AALRSLFFASTALKKEKGGD---AEPLPVRRVGILGGGLMGGGIAHVTAIKAGLPVRIKD 354

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N E +   +K     +   V   +LT+ +    + ++ G  DYS F   D+V+EAV E 
Sbjct: 355 INHEGIRHALKYSWDLLEKKVRSRRLTRTEQQRQMMLISGTTDYSGFAQTDIVVEAVFED 414

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +E+E+    H I A+NTS++ ++ + E+ S  +++IG H+FSP   MPL+E+
Sbjct: 415 LSLKQSMVAEIEQNAALHTIFASNTSSLPIHKIAEQASRPEQVIGLHYFSPVDKMPLVEV 474

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFR 356
           +    TSAQ I   +++ K   K  +VVG+  GF VNR   PY +++AR L++ G  V  
Sbjct: 475 IPHAGTSAQTISTTVSLAKKQGKTAIVVGDRAGFYVNRILAPYINEAARCLIN-GEPVDH 533

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           ID A+ +FG P+GP QLLD  G  V          AF +R       D +LK  R G+ N
Sbjct: 534 IDKALVNFGFPVGPIQLLDEVGIDVGTKIGPILVDAFGERFAAPSGFDAVLKDDRKGRKN 593

Query: 417 GKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           GKG Y Y +KG        V P I    RL N+ P  +    +E EI +  +  ++NE+ 
Sbjct: 594 GKGFYFYGQKGRAAAKKKQVDPAI---YRLLNVTPKAQQ---SEDEIAQRCVMLMLNEAV 647

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R L+E ++  A D D  +V G+ FP +RGG   + D +G   V  +L++ +Q YG  F P
Sbjct: 648 RCLDENVIRSARDGDLGAVFGIGFPPFRGGPFRYMDQLGLASVVKTLERLAQQYGERFTP 707

Query: 536 SRFLEERATKG 546
              L  RA +G
Sbjct: 708 CAGLLRRAQQG 718


>gi|121281866|gb|ABM53499.1| putative enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA
           dehydrogenase PaaC [uncultured bacterium CBNPD1 BAC
           clone 67]
          Length = 708

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 168/540 (31%), Positives = 272/540 (50%), Gaps = 22/540 (4%)

Query: 6   KSITSEEGWKLGLIDAVVTSE---ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA 62
           + + ++E  +LGL+DA+   +   E ++++R     +  + +P + SL  T      +  
Sbjct: 173 RMVGAQEALRLGLVDAIARKDLRAEAIELAR----GLIGQMQPRL-SLRATPAAEPEAWQ 227

Query: 63  REVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLV 122
             V K+ R      AP     Q  ++++ + +     +G   E + F EL+  + SRGL 
Sbjct: 228 AMVAKVNREARGCIAP-----QRAIELVSQSLTLPFSTGQPNERRTFFELMNSEQSRGLR 282

Query: 123 HVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           H+F A+R   K P +  +   PR + ++ +IG G MGSGIA A +     V+L E +   
Sbjct: 283 HLFLAEREAGKRPELASV--PPRDLHQIGIIGAGTMGSGIAVAFLDAGYKVMLVEADDTA 340

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L  G++ +       +  G++ ++   N L  L    + S     D+VIEA+ E + +K 
Sbjct: 341 LQAGLERVNGLYLRSIRSGRIDENTRLNRLSNLVPTTEMSRLAACDLVIEAIFEDLGVKL 400

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
           ++  +L    P   ++ATNTS +DL  + +   + +R +G HFFSPAHVM LLEIVR  R
Sbjct: 401 ELMKKLATLLPASTLIATNTSYLDLEPMADALPAPERFLGLHFFSPAHVMKLLEIVRARR 460

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           T  + +   + +G+ +KK+ V+ G C GF  NR    +      ++  G     ID+A+ 
Sbjct: 461 TGLEALSTALAIGRKLKKIAVISGVCEGFIGNRILAKFRAQCEFMLEEGALPREIDAAME 520

Query: 363 SFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYT 422
           +FGL +GPF + DLAG  +A A  K             PLVD L + GR G+  GKG Y 
Sbjct: 521 AFGLAMGPFAVQDLAGLDIAWARRKRLAATRDPTDRDVPLVDRLCEQGRFGQKAGKGWYA 580

Query: 423 YEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPI-SVTEKEIVEMILFPVVNESCRVLEEG 481
           YE G +  PDP+V  ++      ++    G+P  S + +EI   ++  +VNE  R+L EG
Sbjct: 581 YENGRR-VPDPAVEAMVR-----AHAAATGRPQRSFSAQEIQTRVVTAMVNEGARILGEG 634

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 541
           I  R +D+D   V G  FP++RGG +  ADA+G   V    +      G  F+ +  L E
Sbjct: 635 IAARPADIDLVLVHGYGFPNWRGGPMHHADALGLKQVLAVAQNTEARDGRGFEVAPLLAE 694


>gi|443643279|ref|ZP_21127129.1| Multifunctional fatty acid oxidation complex, alpha subunit
           [Pseudomonas syringae pv. syringae B64]
 gi|443283296|gb|ELS42301.1| Multifunctional fatty acid oxidation complex, alpha subunit
           [Pseudomonas syringae pv. syringae B64]
          Length = 721

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 286/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A KG       SS
Sbjct: 694 -GALYQPTTKLREMAAKGQSFFGQASS 719


>gi|410860966|ref|YP_006976200.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii AltDE1]
 gi|410818228|gb|AFV84845.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii AltDE1]
          Length = 719

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 188/545 (34%), Positives = 280/545 (51%), Gaps = 21/545 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LG 57
           MML      +++  K G++D VV    LLKV+  +AL    +RKP   +  ++  DK L 
Sbjct: 178 MMLTGSPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLE 233

Query: 58  SLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
                R ++ K AR     KT  N P     +DVIE GI     +G+  EA+ F +LVM 
Sbjct: 234 KTGPGRNMMFKKAREATFAKTKGNYPAPGHIIDVIETGINEDMKAGLKAEAEAFGKLVMT 293

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVV 174
             S  L  +FFA     K   V   G+KP  ++KV V+GGGLMG GIA        + V 
Sbjct: 294 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 351

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V +E +   +K     +   V +  +   +    L +L G LDYS ++DVD+V+EAV
Sbjct: 352 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDVDIVVEAV 411

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++E+ C    I A+NTS+I +  +  + +  + +IG H+FSP   MPL
Sbjct: 412 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAEAARPENVIGLHYFSPVDKMPL 471

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
            E++  E+TS QVI   +   K   K PVVV +  GF VNR   PY   A  L+  G  +
Sbjct: 472 AEVIAHEKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 531

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID ++  FG P+GP +LLD  G  V         +AF +R       D +L  GR GK
Sbjct: 532 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 591

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            N KG Y+YE G KP  +     + E    L  + P  K   ++EKE+ E  +  ++NE+
Sbjct: 592 KNQKGFYSYE-GKKPGKE-----VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEA 642

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EG++  A D D  ++ G+ FP + GG   + D +G  +V   L  ++   G+ F 
Sbjct: 643 ARCLDEGVIRNARDGDIGAIFGIGFPPFLGGPFRYMDMLGIKHVVARLNHYATAVGDKFA 702

Query: 535 PSRFL 539
           P+  L
Sbjct: 703 PADVL 707


>gi|167909322|ref|ZP_02496413.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia pseudomallei 112]
          Length = 427

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/423 (35%), Positives = 223/423 (52%), Gaps = 7/423 (1%)

Query: 125 FFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184
           FFAQR  +K P  T  G  PR + ++ V+GGG MG+GIA A +     V + E +   L 
Sbjct: 1   FFAQREAAKSPE-TRRG-APRAIERIGVVGGGTMGAGIAVAALDAGFPVTMIERDDASLE 58

Query: 185 KGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKI 244
           +G   +E    GLV +G++T       L   KG   Y      D+VIEAV E + +K+ +
Sbjct: 59  RGRAHVEKVYAGLVAKGRMTPAAQAARLARFKGGTSYEALAQADVVIEAVFEDMAVKKAV 118

Query: 245 FSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 304
           F+EL +AC P  +LATNTS +D++ +         +IG HFFSPA++M LLE+V   + S
Sbjct: 119 FAELARACKPGAVLATNTSYLDIDELAASVERAPDVIGLHFFSPANIMKLLEVVVPAKVS 178

Query: 305 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSF 364
           A V+     + + + K+PV  G C GF  NR    Y  +A  ++  G   ++ID AIR F
Sbjct: 179 ADVVATAFELARKLGKIPVRAGVCDGFIGNRVLAVYRTAADYMMEDGASPYQIDRAIREF 238

Query: 365 GLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 424
           G P+GP+Q++DLAG  +  AT K        R     + D L + G  G+  G+G Y Y 
Sbjct: 239 GFPMGPYQVVDLAGGDIGWATRKRRAPTRDPRLRYVEIGDRLCERGWFGQKTGRGYYLYP 298

Query: 425 KGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIV 483
            G++   PDP V  II + R    +     P + T++EIV   L  ++NE   V+ E I 
Sbjct: 299 DGARVGTPDPEVEAIIAQARAAKGV----SPRAFTDEEIVRRYLAAMINEGANVVHEKIA 354

Query: 484 VRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 543
           +R  D+D   + G  FP +RGG + +AD VG   V   ++ ++     F+KPS  L +  
Sbjct: 355 LRPLDVDAVFLHGYGFPRHRGGPMHYADTVGLANVLADIRAFAGEDPVFWKPSPLLVDLV 414

Query: 544 TKG 546
            +G
Sbjct: 415 ARG 417


>gi|422665754|ref|ZP_16725625.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aptata str. DSM 50252]
 gi|330976173|gb|EGH76237.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 721

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 286/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A KG       SS
Sbjct: 694 -GALYQPTTKLREMAAKGQSFFGQASS 719


>gi|432373014|ref|ZP_19616053.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE11]
 gi|430895436|gb|ELC17699.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE11]
          Length = 714

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 282/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQERTVSRTLPIRERVMAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A       +   +KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMAGKKTEQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D+   P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDVAPAPLNSVGILGGGLMGGGIAYVTAG-KAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     + G V R  +   + +  L ++ G +DY  F   D++IEAV E++
Sbjct: 341 NAQGINHALKYSWDQLEGKVRRRHIKASERDKQLALISGSMDYHGFSHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH I A+NTS++ ++ +    S   ++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAPHTIFASNTSSLPISDIAAHASRPGQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ +   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTLATTVKLAKKQGKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           +  + +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEATYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYRQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLAAQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E +  G
Sbjct: 688 RFTPCERLLEMSEHG 702


>gi|422617927|ref|ZP_16686627.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. japonica str. M301072]
 gi|330898307|gb|EGH29726.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. japonica str. M301072]
          Length = 721

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 286/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A KG       SS
Sbjct: 694 -GALYQPTTKLREMAAKGQSFFGQASS 719


>gi|383454198|ref|YP_005368187.1| multifunctional fatty acid oxidation complex subunit alpha
           [Corallococcus coralloides DSM 2259]
 gi|380732742|gb|AFE08744.1| multifunctional fatty acid oxidation complex subunit alpha
           [Corallococcus coralloides DSM 2259]
          Length = 745

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 190/580 (32%), Positives = 290/580 (50%), Gaps = 43/580 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA------RRKPWIRSLHRTD 54
           ++L  K++   +  KLG++D VV    L  ++   A+++AA      R     +++ ++ 
Sbjct: 173 LILTGKNVKPSKAKKLGIVDEVVPVPMLKDIALKRAVELAAGTLKVERSHQGFKAVAQSG 232

Query: 55  KLGSLSE------AREVLKLARLQA-----------------KKTAPNMPQHQACLDVIE 91
           K   ++        +++ K A L+                  KKT    P  +  L VI 
Sbjct: 233 KKKGIAGIFQGLINKDLWKEAALEDNPLGRKVMFDQAKKQLLKKTRGKYPAQEKALQVIR 292

Query: 92  EGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 151
            G+  G  +G+  EAK F ELV  D SR LV +FFA  A  K     +  LKPR V+KV 
Sbjct: 293 VGLESGRKAGLDAEAKAFGELVFTDVSRRLVEIFFATTALKKENGTANPNLKPREVKKVG 352

Query: 152 VIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 210
           V+GGGLMG GIA  A +L  + V +K+ +     + +K ++  +   V R  LT+ ++N 
Sbjct: 353 VLGGGLMGGGIAYVAGVLQGVPVRVKDRDDAGAGRALKQVQTVLDERVKRRSLTRLESNA 412

Query: 211 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270
            L  +    DYS FK VD+VIEAV E + LK ++ +E+E     + I A+NTS++ +  +
Sbjct: 413 KLSNITAGTDYSGFKSVDLVIEAVFEDLKLKHQVIAEVEAVTGENTIFASNTSSLPIGEL 472

Query: 271 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 330
            + +    ++IG H+FSP H MPLLEI+    T+  V    + VGK   K  +VV +  G
Sbjct: 473 AKGSKRPSQVIGMHYFSPVHKMPLLEIITHPGTAEWVTATCVDVGKKQGKTVIVVNDGPG 532

Query: 331 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD 390
           F  +R   PY   A  L++ G D+ ++D A+  FG P+GP  LLD  G  VA       +
Sbjct: 533 FYTSRILAPYMNEAAYLLAEGADIVQLDKALVDFGFPVGPITLLDEVGIDVAQKVGPIME 592

Query: 391 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMP 450
            AF  R      ++ ++  GR G+   KG Y YE G K + DP V            ++P
Sbjct: 593 AAFGKRMAAPKALEGVVSDGRLGRKTNKGFYLYENGKKKEVDPQVY----------LLLP 642

Query: 451 GGKP-ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFW 509
            GK   S+   E+ E +   +VNE+ R L EGI+  A D D  ++ G+ FP + GG   +
Sbjct: 643 HGKDRKSLEASEMAERVALQMVNEAIRCLGEGILRNARDGDVGAIFGLGFPPFLGGPFRY 702

Query: 510 ADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE--RATKGI 547
           ADA+G   +   L+ +   YG  F P+  L E  RA KG 
Sbjct: 703 ADALGPANLLRKLEHYQDKYGERFTPAPLLVEKVRAGKGF 742


>gi|386281410|ref|ZP_10059072.1| fatty acid oxidation complex subunit alpha [Escherichia sp.
           4_1_40B]
 gi|432692317|ref|ZP_19927545.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE161]
 gi|386121549|gb|EIG70164.1| fatty acid oxidation complex subunit alpha [Escherichia sp.
           4_1_40B]
 gi|431226665|gb|ELF23824.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE161]
          Length = 714

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 279/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA    +K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVTKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|424078379|ref|ZP_17815381.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA505]
 gi|424110797|ref|ZP_17845053.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93-001]
 gi|424450586|ref|ZP_17902307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA32]
 gi|425418333|ref|ZP_18799615.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK523]
 gi|429079301|ref|ZP_19142447.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0713]
 gi|390643971|gb|EIN23277.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA505]
 gi|390660468|gb|EIN38171.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93-001]
 gi|390742848|gb|EIO13838.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA32]
 gi|408336302|gb|EKJ51089.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK523]
 gi|427329287|gb|EKW90618.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0713]
          Length = 712

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A+    + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRAQLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|300114046|ref|YP_003760621.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
           watsonii C-113]
 gi|299539983|gb|ADJ28300.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
           watsonii C-113]
          Length = 737

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 160/486 (32%), Positives = 255/486 (52%), Gaps = 23/486 (4%)

Query: 72  QAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 126
           QA+K     T  N+P     L+ I+ G+  G  +G   E + F +L +   +R L+ +F 
Sbjct: 253 QARKKVLSHTHGNLPAPLQALEAIKTGMEQGLEAGFKAEVEAFGDLAVSTKARNLMALFL 312

Query: 127 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLK 185
           AQ A  K  + TD  + PR VRKV V+G GLMGSG+A        + V LK+V  E L +
Sbjct: 313 AQSALKK-DSGTDEKVAPRKVRKVGVLGAGLMGSGVAYVTAAKARLPVRLKDVKQEVLRQ 371

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G++ +   V   V + ++T  + +  L +++   +Y+ FK  D+VIEAV+E + +KQ++ 
Sbjct: 372 GLRVLWNAVTEQVNKRRMTAGEKDRVLALVRPTTEYTGFKQADVVIEAVVEDLEVKQQVL 431

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
            E+E    P  I A+NTS+I ++ + E +   + ++G H+FSP   +PLLE++ TE+++ 
Sbjct: 432 REVETHGSPEMIFASNTSSIPIHKIAEASDRPEAVVGMHYFSPVPKVPLLEVIVTEKSAP 491

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
           +VI   + +GK   K  +VV +  GF   R   PY   A  L++ GV +  ID A+ +FG
Sbjct: 492 EVIATCVALGKQQNKTVIVVRDGAGFYTTRILAPYINEATHLLAEGVSIQDIDEALVNFG 551

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE- 424
            P+GP +LLD  G  V    +   ++AF  R   + +++ L+ S R GK NG+GLY Y+ 
Sbjct: 552 FPVGPLKLLDEVGIDVVQKIAHILEEAFGGRMKPTSVLEKLVDSHRFGKKNGQGLYRYQK 611

Query: 425 -----KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
                KG   + DPSV P++        I P  K   +   EI    L P++NE+     
Sbjct: 612 SGGTFKGKGKQVDPSVYPLL-------GIKPDKK---LEANEIAMRCLLPMLNEAVHCYR 661

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           +GI+  A D D  +V G+ FP + GG   + D  G+  +   L  +    G  F P   L
Sbjct: 662 DGILRSARDGDVGAVFGLGFPPFLGGPFRFMDNRGSGKIVEELTGYQNQLGERFTPDSLL 721

Query: 540 EERATK 545
            + A +
Sbjct: 722 VDMARQ 727


>gi|66046519|ref|YP_236360.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. syringae B728a]
 gi|81308083|sp|Q4ZRA0.1|FADB_PSEU2 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|63257226|gb|AAY38322.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Pseudomonas syringae pv. syringae B728a]
          Length = 721

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 285/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTPAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKARGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A  G       SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASS 719


>gi|407686989|ref|YP_006802162.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii str. 'Balearic Sea AD45']
 gi|407290369|gb|AFT94681.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii str. 'Balearic Sea AD45']
          Length = 713

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 189/545 (34%), Positives = 279/545 (51%), Gaps = 21/545 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LG 57
           MML      +++  K G++D VV    LLKV+  +AL    +RKP   +  ++  DK L 
Sbjct: 172 MMLTGSPARAKQAKKYGIVDEVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227

Query: 58  SLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
                R ++ K AR     KT  N P     +DVIE G+  G  +G+  EA+ F +LVM 
Sbjct: 228 KTGPGRNMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNEGMKAGLKAEAEAFGKLVMT 287

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVV 174
             S  L  +FFA     K   V   G+KP  ++KV V+GGGLMG GIA        + V 
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMKKVGVLGGGLMGGGIAYVTSTKAGVPVR 345

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V +E +   +K     +   V +  +   +    L +L G LDYS ++D D+V+EAV
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAV 405

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++E+ C    I A+NTS+I +  +  K +  + +IG H+FSP   MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
            E++  ++TS QVI   +   K   K PVVV +  GF VNR   PY   A  L+  G  +
Sbjct: 466 AEVIAHDKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID ++  FG P+GP +LLD  G  V         +AF +R       D +L  GR GK
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            N KG Y+YE     KP   V   I E   LS   P  K   ++EKE+ E  +  ++NE+
Sbjct: 586 KNQKGFYSYE---SKKPGKEVDESIYELLGLS---PSAK---LSEKEVAERCVLMMLNEA 636

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EG++  A D D  ++ G+ FP + GG   + D +G  +V   L  ++   G+ F 
Sbjct: 637 ARCLDEGVIRNARDGDIGAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFA 696

Query: 535 PSRFL 539
           P+  L
Sbjct: 697 PAEVL 701


>gi|15802887|ref|NP_288914.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. EDL933]
 gi|15832478|ref|NP_311251.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. Sakai]
 gi|168761215|ref|ZP_02786222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4501]
 gi|217327205|ref|ZP_03443288.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. TW14588]
 gi|387883556|ref|YP_006313858.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli Xuzhou21]
 gi|419046263|ref|ZP_13593200.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3A]
 gi|419052061|ref|ZP_13598933.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3B]
 gi|419058092|ref|ZP_13604897.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3C]
 gi|419063565|ref|ZP_13610293.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3D]
 gi|419110368|ref|ZP_13655426.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4F]
 gi|420293300|ref|ZP_14795423.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW11039]
 gi|421819151|ref|ZP_16254649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           10.0821]
 gi|421831882|ref|ZP_16267169.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA7]
 gi|423725942|ref|ZP_17700048.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA31]
 gi|424122899|ref|ZP_17856245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA5]
 gi|424141894|ref|ZP_17873805.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA14]
 gi|424148394|ref|ZP_17879778.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA15]
 gi|424456780|ref|ZP_17907939.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA33]
 gi|424476069|ref|ZP_17925411.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA42]
 gi|424527109|ref|ZP_17970834.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4421]
 gi|424533262|ref|ZP_17976621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4422]
 gi|425099007|ref|ZP_18501748.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.4870]
 gi|425110981|ref|ZP_18512916.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           6.0172]
 gi|425126925|ref|ZP_18528120.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0586]
 gi|425163374|ref|ZP_18562269.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA506]
 gi|425169110|ref|ZP_18567594.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA507]
 gi|425175176|ref|ZP_18573305.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA504]
 gi|425187471|ref|ZP_18584754.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1997]
 gi|425212862|ref|ZP_18608272.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA4]
 gi|425218982|ref|ZP_18613959.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA23]
 gi|425225534|ref|ZP_18620011.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA49]
 gi|425231799|ref|ZP_18625848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA45]
 gi|425237715|ref|ZP_18631444.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TT12B]
 gi|425411929|ref|ZP_18793720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           NE098]
 gi|425429592|ref|ZP_18810217.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           0.1304]
 gi|428954061|ref|ZP_19025876.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           88.1042]
 gi|428959997|ref|ZP_19031331.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           89.0511]
 gi|428978845|ref|ZP_19048687.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           90.2281]
 gi|428984647|ref|ZP_19054058.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93.0055]
 gi|428990818|ref|ZP_19059824.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93.0056]
 gi|428996622|ref|ZP_19065250.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           94.0618]
 gi|429009002|ref|ZP_19076544.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.1288]
 gi|429015507|ref|ZP_19082415.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.0943]
 gi|429021455|ref|ZP_19087992.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0428]
 gi|429027410|ref|ZP_19093442.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0427]
 gi|429045597|ref|ZP_19110327.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0107]
 gi|429051018|ref|ZP_19115595.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0003]
 gi|429061895|ref|ZP_19125930.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0007]
 gi|429827303|ref|ZP_19358378.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0109]
 gi|429833630|ref|ZP_19364022.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0010]
 gi|444959192|ref|ZP_21277057.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1753]
 gi|444964408|ref|ZP_21282028.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1775]
 gi|444986403|ref|ZP_21303195.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA11]
 gi|445029759|ref|ZP_21345446.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1781]
 gi|445051672|ref|ZP_21366726.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.0083]
 gi|445057373|ref|ZP_21372243.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0670]
 gi|81765895|sp|Q8XCP2.1|FADJ_ECO57 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|12516705|gb|AAG57469.1|AE005465_9 putative enzyme [Escherichia coli O157:H7 str. EDL933]
 gi|13362694|dbj|BAB36647.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
 gi|189368241|gb|EDU86657.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4501]
 gi|209764650|gb|ACI80637.1| putative enzyme [Escherichia coli]
 gi|217319572|gb|EEC27997.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. TW14588]
 gi|377893093|gb|EHU57532.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3A]
 gi|377893746|gb|EHU58180.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3B]
 gi|377904679|gb|EHU68957.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3C]
 gi|377910040|gb|EHU74238.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3D]
 gi|377957250|gb|EHV20786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4F]
 gi|386797014|gb|AFJ30048.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli Xuzhou21]
 gi|390680876|gb|EIN56691.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA5]
 gi|390700514|gb|EIN74815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA15]
 gi|390701304|gb|EIN75531.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA14]
 gi|390742582|gb|EIO13581.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA31]
 gi|390745511|gb|EIO16306.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA33]
 gi|390769402|gb|EIO38337.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA42]
 gi|390797386|gb|EIO64642.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW11039]
 gi|390850491|gb|EIP13866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4421]
 gi|390861187|gb|EIP23463.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4422]
 gi|408064254|gb|EKG98736.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA7]
 gi|408078962|gb|EKH13090.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA506]
 gi|408082791|gb|EKH16751.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA507]
 gi|408091185|gb|EKH24419.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA504]
 gi|408104353|gb|EKH36675.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1997]
 gi|408127401|gb|EKH57891.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA4]
 gi|408137795|gb|EKH67490.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA23]
 gi|408139875|gb|EKH69467.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA49]
 gi|408146200|gb|EKH75343.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA45]
 gi|408155264|gb|EKH83590.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TT12B]
 gi|408326798|gb|EKJ42567.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           NE098]
 gi|408346333|gb|EKJ60629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           0.1304]
 gi|408549874|gb|EKK27226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.4870]
 gi|408551231|gb|EKK28518.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           6.0172]
 gi|408569904|gb|EKK45889.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0586]
 gi|408612908|gb|EKK86242.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           10.0821]
 gi|427205210|gb|EKV75470.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           88.1042]
 gi|427207586|gb|EKV77755.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           89.0511]
 gi|427224319|gb|EKV93029.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           90.2281]
 gi|427242113|gb|EKW09531.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93.0056]
 gi|427242613|gb|EKW10016.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93.0055]
 gi|427246204|gb|EKW13424.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           94.0618]
 gi|427261315|gb|EKW27252.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.0943]
 gi|427264802|gb|EKW30441.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.1288]
 gi|427276418|gb|EKW40991.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0428]
 gi|427279374|gb|EKW43791.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0427]
 gi|427299292|gb|EKW62267.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0107]
 gi|427300622|gb|EKW63553.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0003]
 gi|427315581|gb|EKW77572.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0007]
 gi|429253891|gb|EKY38343.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0109]
 gi|429255673|gb|EKY39977.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0010]
 gi|444573142|gb|ELV49533.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1753]
 gi|444577243|gb|ELV53387.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1775]
 gi|444593577|gb|ELV68786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA11]
 gi|444641747|gb|ELW14970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1781]
 gi|444664142|gb|ELW36332.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.0083]
 gi|444670122|gb|ELW42056.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0670]
          Length = 714

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A+    + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRAQLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|331673841|ref|ZP_08374604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA280]
 gi|331069114|gb|EGI40506.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA280]
          Length = 714

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 176/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIFPLIGTQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|256823193|ref|YP_003147156.1| fatty acid oxidation complex subunit alpha FadJ [Kangiella
           koreensis DSM 16069]
 gi|256796732|gb|ACV27388.1| fatty acid oxidation complex, alpha subunit FadJ [Kangiella
           koreensis DSM 16069]
          Length = 715

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 190/557 (34%), Positives = 287/557 (51%), Gaps = 36/557 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVS--RLWAL-DIAARRKPWIRSLHRTDKLG 57
           MML  K +  ++  KLGL+D VV +  L+K +  RL  L    +++KPW   L       
Sbjct: 166 MMLTGKQLFPKQAKKLGLVDEVVPAANLMKAAYRRLHELRKDRSKKKPWTYYL------- 218

Query: 58  SLSEAREVL--------KLARLQAKKTAP-----NMPQHQACLDVIEEGIVHGGYSGVLK 104
           SL+  +E+L         L   QA+KT       N P     ++ +E+G   G  +G+  
Sbjct: 219 SLAGIKELLLEANPLGRNLVFNQARKTVDSKTKGNYPAPHKIIECVEKGYSQGFDAGLAI 278

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           EAK F +LV+   ++ L+ +FFA     K   V D  ++   V KV V+GGGLMGSGIA 
Sbjct: 279 EAKNFGQLVVTPEAKALISIFFATTELKKDKGV-DGDVEAITVDKVGVLGGGLMGSGIAY 337

Query: 165 AHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223
             +      V +K+V+++ +   +      +   + R  ++   A NA+  L G  DY  
Sbjct: 338 VSVDKAGKQVRVKDVSAKGVNGALNYSWKIISKKMKRRIISPSDARNAMSFLTGSTDYKG 397

Query: 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA 283
           FKD DMVIEAV E + LK ++  ++E+ C    I ATNTS+I ++ + E     + ++G 
Sbjct: 398 FKDCDMVIEAVFEDLDLKHQMVKDVEENCSEKTIFATNTSSIPISKIAEGAKRPEHVVGL 457

Query: 284 HFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQS 343
           H+FSP   MPLLEI++T++T+  VI   + +GK   K P+VV +  GF VNR   PY   
Sbjct: 458 HYFSPVEKMPLLEIIKTDKTADWVIATCVALGKQQGKTPIVVNDGAGFYVNRILAPYVNE 517

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
           A +L+S GV + ++D A+   G P+GP  LLD  G  VA   +     AF +R       
Sbjct: 518 AGILLSEGVAIEKLDKAMVKAGFPVGPITLLDEVGIDVATKVAPILQDAFGERMEPPKAF 577

Query: 404 DLLLKSGRNGKANGKGLYTY-EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
             LL   R G+ N +G Y Y  KG K + D SV        R+  + PG +   V+  EI
Sbjct: 578 SKLLDDDRKGRKNNRGFYQYPAKGKKKQVDESVY-------RVLGVEPGKE---VSSAEI 627

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
            E  +  + NE+ R L+EG++  A D D  ++ G+ FP ++GG   + D  G   V   L
Sbjct: 628 AERGMLLMANEAARCLDEGVIRSARDGDVGAIFGIGFPPFQGGPFRYMDKRGIATVVDRL 687

Query: 523 KKWSQLYGNFFKPSRFL 539
           + + +LYG  FKP+  L
Sbjct: 688 EHYQELYGARFKPADVL 704


>gi|422674313|ref|ZP_16733667.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aceris str. M302273]
 gi|330972041|gb|EGH72107.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. aceris str. M302273]
          Length = 721

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 171/558 (30%), Positives = 283/558 (50%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTPAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  ++P+  L E A  G
Sbjct: 694 -GALYQPTAKLREMAANG 710


>gi|114590836|ref|XP_517004.2| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Pan
           troglodytes]
 gi|410226936|gb|JAA10687.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
           troglodytes]
 gi|410247014|gb|JAA11474.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
           troglodytes]
 gi|410289468|gb|JAA23334.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
           troglodytes]
 gi|410332285|gb|JAA35089.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
           troglodytes]
 gi|410332287|gb|JAA35090.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
           troglodytes]
 gi|410332289|gb|JAA35091.1| enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Pan
           troglodytes]
          Length = 723

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 180/569 (31%), Positives = 288/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 156 RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA  +LK+ R       P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 213 FSEA--LLKMRRQH-----PGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 326 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 444 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETHHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|444350282|ref|YP_007386426.1| Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC
           5.1.2.3) [Enterobacter aerogenes EA1509E]
 gi|443901112|emb|CCG28886.1| Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase
           (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC
           5.1.2.3) [Enterobacter aerogenes EA1509E]
          Length = 714

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 286/556 (51%), Gaps = 29/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K +   +  K GL+D VV    LL+     A+++A + +P  R++   +++ +  
Sbjct: 167 MILTGKQLRPRQALKAGLVDDVVPQSILLRT----AVELALQGRPASRTVPVRERVLAGP 222

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R++L   +A+   +KT  N P  +  L VIE G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRQLLFRMVAKKTQQKTQGNYPAAERILQVIENGLAHGCSSGYAEEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVL 175
           + L  +FFA     K     D G +  P  +  +AV+GGGLMG GIA        + V +
Sbjct: 283 QALRSIFFASTDLKK-----DRGAEADPAALNSIAVLGGGLMGGGIAYVTACKGGLPVRI 337

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++ ++ +   +K     +   V R  L   + +  L ++ G  DY  F   D+VIEAV 
Sbjct: 338 KDIQAKGINHALKYSWDLLDKQVRRRYLRASERDRQLALISGATDYHGFAHRDVVIEAVF 397

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++  E+E+ C P  I A+NTS++ +  +  + +  +++IG HFFSP   MPL+
Sbjct: 398 EDLALKQRMVGEIEQCCGPQTIFASNTSSLPIGEIAAQAARPEKVIGLHFFSPVEKMPLV 457

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    T  Q I  ++ + K+  K P+VV +  GF VNR   PY   A  L+  G  V 
Sbjct: 458 EVIPHATTDEQTIATVVKLAKLQGKTPIVVADRAGFYVNRILAPYINEAMRLLLEGEPVE 517

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNG 413
            ID+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G
Sbjct: 518 HIDNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLETAFGER-FSPPANIIDAILKDDRKG 576

Query: 414 KANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           + N +G Y YE   + SK + DP++ P+      L+   P  +   ++ +++ E  +  +
Sbjct: 577 RKNNRGFYLYETKRRKSKKRADPAIYPL------LAVASPRAR---LSAQQVAERCVMMM 627

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R  +E IV  A D D  +V G+ FP +  G   + D++GA  V   L++ +  YG
Sbjct: 628 LNEAARCFDEQIVRSARDGDIGAVFGIGFPPFLSGPFRYMDSLGAGEVAAILQRLAAQYG 687

Query: 531 NFFKPSRFLEERATKG 546
             F P   L   A +G
Sbjct: 688 PRFSPCDTLLRMAEQG 703


>gi|261878539|ref|NP_001159887.1| peroxisomal bifunctional enzyme isoform 2 [Homo sapiens]
 gi|194376928|dbj|BAG63025.1| unnamed protein product [Homo sapiens]
          Length = 627

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 178/569 (31%), Positives = 287/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 60  RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI-- 116

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 117 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 169

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 170 RALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 229

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 230 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVF 287

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 288 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 347

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 348 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 407

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 408 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIP 466

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   +   R+  +I    +P ++++ E
Sbjct: 467 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTHHI----EPRTISQDE 522

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 523 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 582

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 583 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 611


>gi|419154746|ref|ZP_13699309.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6C]
 gi|377997328|gb|EHV60435.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6C]
          Length = 712

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 281 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 627

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 628 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 687

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 688 TPCERLVEMGARG 700


>gi|218700819|ref|YP_002408448.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli IAI39]
 gi|386625047|ref|YP_006144775.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O7:K1 str. CE10]
 gi|254788659|sp|B7NP24.1|FADJ_ECO7I RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|218370805|emb|CAR18618.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli IAI39]
 gi|349738784|gb|AEQ13490.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O7:K1 str. CE10]
          Length = 714

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|302186668|ref|ZP_07263341.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae pv. syringae 642]
          Length = 721

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 171/567 (30%), Positives = 285/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQSAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D     + V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYD--RIAKDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A  G       SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASS 719


>gi|407699429|ref|YP_006824216.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii str. 'Black Sea 11']
 gi|407248576|gb|AFT77761.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas macleodii str. 'Black Sea 11']
          Length = 713

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 187/545 (34%), Positives = 279/545 (51%), Gaps = 21/545 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LG 57
           MML      +++  K G++D VV    LLKV+  +AL    +RKP   +  ++  DK L 
Sbjct: 172 MMLTGAPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKVLE 227

Query: 58  SLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
                R ++ K AR     KT  N P     +DVIE G+  G  +G+  EA+ F +LVM 
Sbjct: 228 KTGPGRSMMFKKAREATFAKTKGNYPAPGYIIDVIETGMNDGMKAGLKAEAEAFGKLVMT 287

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVV 174
             S  L  +FFA     K   V   G+KP  + KV V+GGGLMG GIA        + V 
Sbjct: 288 PESFQLRQIFFATTEMKKENGVE--GVKPEKMNKVGVLGGGLMGGGIAYVTSTKAGVPVR 345

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V +E +   +K     +   V +  +   +    L +L G LDYS ++D D+V+EAV
Sbjct: 346 IKDVRAEGIANAMKYSYDILNKKVKKRFMRNSEMQKQLALLTGTLDYSGYQDADIVVEAV 405

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++E+ C    I A+NTS+I +  +  K +  + +IG H+FSP   MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKESTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
            E++  ++TS QVI   +   K   K PVVV +  GF VNR   PY   A  L+  G  +
Sbjct: 466 AEVIAHDKTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAANLILDGEPI 525

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID ++  FG P+GP +LLD  G  V         +AF +R       D +L  GR GK
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            N KG Y+YE G KP  +     + E    L  + P  K   ++EKE+ E  +  ++NE+
Sbjct: 586 KNQKGFYSYE-GKKPGKE-----VDESIYELLGLSPSAK---LSEKEVAERCVLMMLNEA 636

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EG++  A D D  ++ G+ FP + GG   + D +G  +V   L  ++   G+ F 
Sbjct: 637 ARCLDEGVIRSARDGDIGAIFGIGFPPFLGGPFRYMDTLGIKHVVARLNHYATAVGDKFA 696

Query: 535 PSRFL 539
           P+  L
Sbjct: 697 PAEVL 701


>gi|419143293|ref|ZP_13688031.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6A]
 gi|377993806|gb|EHV56937.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6A]
          Length = 714

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|417263965|ref|ZP_12051361.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2.3916]
 gi|418303792|ref|ZP_12915586.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           UMNF18]
 gi|339415890|gb|AEJ57562.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           UMNF18]
 gi|386222522|gb|EII44949.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2.3916]
          Length = 714

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTRSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|45384238|ref|NP_990387.1| trifunctional enzyme subunit alpha, mitochondrial [Gallus gallus]
 gi|2737971|gb|AAB94317.1| CFR-associated protein p70 [Gallus gallus]
          Length = 770

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 171/568 (30%), Positives = 279/568 (49%), Gaps = 36/568 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           MML  ++I ++   K+GL+D +V             T E L +V+  +A  +A +     
Sbjct: 207 MMLTGRNINADRAKKMGLVDQLVDPLGPGVKPPEARTIEYLEEVAIGFARGLANKTVSAK 266

Query: 48  RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGG 98
           RS     ++   + A   L   R Q  KT  N  Q Q           ++V++ G+  G 
Sbjct: 267 RSKGLVQRITDYAMA---LPFVRQQVYKTVENKVQKQTKGLYPAPLKIIEVVKAGLDQGH 323

Query: 99  YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLM 158
            +G L E++ F  L M + S+ L+ ++  Q    K       G   R V+ +AV+G GLM
Sbjct: 324 DTGYLTESQSFGHLAMTNESKALIGLYHGQVRCKK----NKFGTPQREVKTLAVLGAGLM 379

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G+GIA   +   +  +LK+   + L +G + +   + G V +  LT  + ++ L  +   
Sbjct: 380 GAGIAQVSVDKGLKTILKDTTQQGLDRGQQQVFKGLNGKVKKKSLTSFERDSILSNMTAQ 439

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           LDY  F+  DMVIEAV E + +K K+  E+E   PPHCI A+NTS + +N +   +   +
Sbjct: 440 LDYKGFEKADMVIEAVFEDISIKHKVLKEVEAVIPPHCIFASNTSALPINQIAAVSQRPE 499

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
           ++IG H+FSP   M LLEI+ T++TS       + VG    KV +VV +  GF   R   
Sbjct: 500 KVIGMHYFSPVDKMQLLEIITTDKTSQDTAASAVAVGLKQGKVVIVVKDGPGFYTTRCLG 559

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-- 396
           P       ++  G+D  ++D+   +FG P+G   L+D  G  VA   +++  KAF +R  
Sbjct: 560 PMLAEVGRVLQEGIDPKKVDAISTAFGFPVGAATLIDEVGVDVATHVAEDLGKAFGERFG 619

Query: 397 SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS 456
                L  L+++ G  G+  GKG Y Y++G K +   S +  I     L+      KP  
Sbjct: 620 GGSIGLFKLMVQKGFLGRKAGKGFYIYQEGVKNRSLNSGMDEI-----LAQFKLPAKPEV 674

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
            T+++I   ++   VNE+   L+EGI+    + D  +V G+ FP   GG   +AD+ GA 
Sbjct: 675 CTDEDIQMRLVTRFVNEAAMCLQEGILSNPMEGDIGAVFGLGFPPCLGGPFRYADSYGAK 734

Query: 517 YVYTSLKKWSQLYGNFFKPSRFLEERAT 544
            +   L+K+  +YG+ F P + L + A 
Sbjct: 735 QLVDKLRKYEAVYGSQFTPCQLLLDYAN 762


>gi|417635283|ref|ZP_12285496.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_S1191]
 gi|345387566|gb|EGX17388.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_S1191]
          Length = 712

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 281 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 627

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 628 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 687

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 688 TPCERLVEMGARG 700


>gi|425306070|ref|ZP_18695777.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli N1]
 gi|408228064|gb|EKI51614.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli N1]
          Length = 714

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 177/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +   ++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPGQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++VE  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVVERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R +EE ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVEEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|16130274|ref|NP_416843.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|170081957|ref|YP_001731277.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli str. K-12 substr. DH10B]
 gi|238901514|ref|YP_002927310.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli BW2952]
 gi|300948508|ref|ZP_07162604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           116-1]
 gi|300956387|ref|ZP_07168679.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           175-1]
 gi|301023610|ref|ZP_07187371.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           196-1]
 gi|331642982|ref|ZP_08344117.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H736]
 gi|386594878|ref|YP_006091278.1| fatty acid oxidation complex subunit FadJ [Escherichia coli DH1]
 gi|386705600|ref|YP_006169447.1| Fatty acid oxidation complex subunit alpha [Escherichia coli P12b]
 gi|387622052|ref|YP_006129680.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli DH1]
 gi|388478391|ref|YP_490583.1| fused enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase,
           dodecenoyl-CoA D-isomerase, and 3-hydroxyacyl-CoA
           dehydrogenase, subunit of anaerobic fatty acid oxidation
           complex [Escherichia coli str. K-12 substr. W3110]
 gi|404375692|ref|ZP_10980875.1| fatty acid oxidation complex subunit alpha [Escherichia sp. 1_1_43]
 gi|417271642|ref|ZP_12058991.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2.4168]
 gi|417277462|ref|ZP_12064785.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.2303]
 gi|417291359|ref|ZP_12078640.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B41]
 gi|417613823|ref|ZP_12264281.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_EH250]
 gi|417618946|ref|ZP_12269360.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           G58-1]
 gi|417945214|ref|ZP_12588449.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli XH140A]
 gi|417975345|ref|ZP_12616144.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli XH001]
 gi|418957282|ref|ZP_13509206.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli J53]
 gi|419160031|ref|ZP_13704536.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6D]
 gi|419165155|ref|ZP_13709612.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6E]
 gi|419810072|ref|ZP_14334955.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O32:H37 str. P4]
 gi|422766957|ref|ZP_16820684.1| fatty oxidation complex [Escherichia coli E1520]
 gi|422771812|ref|ZP_16825501.1| fatty oxidation complex [Escherichia coli E482]
 gi|422819480|ref|ZP_16867691.1| fatty acid oxidation complex subunit alpha [Escherichia coli M919]
 gi|423704274|ref|ZP_17678699.1| fatty acid oxidation complex subunit alpha [Escherichia coli H730]
 gi|425115761|ref|ZP_18517562.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0566]
 gi|425120482|ref|ZP_18522181.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0569]
 gi|425273513|ref|ZP_18664925.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW15901]
 gi|425284058|ref|ZP_18675097.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW00353]
 gi|432564602|ref|ZP_19801183.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE51]
 gi|432576626|ref|ZP_19813086.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE56]
 gi|432637590|ref|ZP_19873460.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE81]
 gi|432686178|ref|ZP_19921475.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE156]
 gi|432705142|ref|ZP_19940242.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE171]
 gi|432737859|ref|ZP_19972617.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE42]
 gi|432955862|ref|ZP_20147740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE197]
 gi|433048722|ref|ZP_20236075.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE120]
 gi|450246101|ref|ZP_21900842.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli S17]
 gi|3334437|sp|P77399.1|FADJ_ECOLI RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|254788656|sp|B1X9L4.1|FADJ_ECODH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|259646369|sp|C4ZVN2.1|FADJ_ECOBW RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|1788682|gb|AAC75401.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|1799732|dbj|BAA16195.1| fused enoyl-CoA hydratase, 3-hydroxybutyryl-CoA epimerase,
           dodecenoyl-CoA D-isomerase, and 3-hydroxyacyl-CoA
           dehydrogenase, subunit of anaerobic fatty acid oxidation
           complex [Escherichia coli str. K12 substr. W3110]
 gi|169889792|gb|ACB03499.1| fused enoyl-CoA hydratase and epimerase and isomerase;
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli str.
           K-12 substr. DH10B]
 gi|238861190|gb|ACR63188.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli BW2952]
 gi|260448567|gb|ACX38989.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
           DH1]
 gi|299880771|gb|EFI88982.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           196-1]
 gi|300316784|gb|EFJ66568.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           175-1]
 gi|300451984|gb|EFK15604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           116-1]
 gi|315136976|dbj|BAJ44135.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli DH1]
 gi|323936461|gb|EGB32749.1| fatty oxidation complex [Escherichia coli E1520]
 gi|323940964|gb|EGB37151.1| fatty oxidation complex [Escherichia coli E482]
 gi|331039780|gb|EGI12000.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H736]
 gi|342362994|gb|EGU27106.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli XH140A]
 gi|344194910|gb|EGV48981.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli XH001]
 gi|345362017|gb|EGW94174.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_EH250]
 gi|345375660|gb|EGX07607.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           G58-1]
 gi|359332685|dbj|BAL39132.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase, subunit of
           anaerobic fatty acid oxidation complex [Escherichia coli
           str. K-12 substr. MDS42]
 gi|378007375|gb|EHV70344.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6D]
 gi|378011237|gb|EHV74182.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC6E]
 gi|383103768|gb|AFG41277.1| Fatty acid oxidation complex subunit alpha [Escherichia coli P12b]
 gi|384379929|gb|EIE37796.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli J53]
 gi|385157156|gb|EIF19149.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O32:H37 str. P4]
 gi|385536893|gb|EIF83778.1| fatty acid oxidation complex subunit alpha [Escherichia coli M919]
 gi|385706513|gb|EIG43552.1| fatty acid oxidation complex subunit alpha [Escherichia coli H730]
 gi|386235342|gb|EII67318.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2.4168]
 gi|386239530|gb|EII76457.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.2303]
 gi|386253681|gb|EIJ03371.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B41]
 gi|404290832|gb|EJZ47734.1| fatty acid oxidation complex subunit alpha [Escherichia sp. 1_1_43]
 gi|408193295|gb|EKI18848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW15901]
 gi|408201748|gb|EKI26897.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW00353]
 gi|408568039|gb|EKK44081.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0566]
 gi|408569235|gb|EKK45240.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0569]
 gi|431093018|gb|ELD98689.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE51]
 gi|431114661|gb|ELE18189.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE56]
 gi|431170784|gb|ELE70973.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE81]
 gi|431221960|gb|ELF19257.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE156]
 gi|431242628|gb|ELF37043.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE171]
 gi|431282319|gb|ELF73204.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE42]
 gi|431467248|gb|ELH47259.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE197]
 gi|431564493|gb|ELI37667.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE120]
 gi|449319805|gb|EMD09851.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli S17]
          Length = 714

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|68989263|ref|NP_001957.2| peroxisomal bifunctional enzyme isoform 1 [Homo sapiens]
 gi|223590229|sp|Q08426.3|ECHP_HUMAN RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
           Short=PBFE; Includes: RecName: Full=Enoyl-CoA
           hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|62021246|gb|AAH38948.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Homo sapiens]
 gi|62898652|dbj|BAD97180.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           variant [Homo sapiens]
 gi|83405887|gb|AAI10461.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Homo sapiens]
 gi|119598635|gb|EAW78229.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
           isoform CRA_b [Homo sapiens]
 gi|119598636|gb|EAW78230.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase,
           isoform CRA_b [Homo sapiens]
 gi|159032526|emb|CAD22483.1| L-3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
          Length = 723

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 178/569 (31%), Positives = 287/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 156 RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 213 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 326 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 444 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   +   R+  +I    +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTHHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|421774531|ref|ZP_16211143.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli AD30]
 gi|408460279|gb|EKJ84058.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli AD30]
          Length = 714

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|293410698|ref|ZP_06654274.1| fatty oxidation complex [Escherichia coli B354]
 gi|291471166|gb|EFF13650.1| fatty oxidation complex [Escherichia coli B354]
          Length = 714

 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 176/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+EK C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEKNCAAHIIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|432417818|ref|ZP_19660422.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE44]
 gi|430939062|gb|ELC59285.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE44]
          Length = 714

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|198426802|ref|XP_002125312.1| PREDICTED: similar to enoyl-Coenzyme A, hydratase/3-hydroxyacyl
           Coenzyme A [Ciona intestinalis]
          Length = 486

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 154/423 (36%), Positives = 238/423 (56%), Gaps = 21/423 (4%)

Query: 134 VPNVTDIG-LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEA 192
           +P+ T  G + P  VRK AV+G G MG GIA + +     V + E+N   L  G+  +  
Sbjct: 38  LPSTTANGNVSPMMVRKTAVLGLGTMGRGIAISLLKAGKIVYVFEMNKTSLDSGVNALYD 97

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
            +  LV R  +TQ         +    +Y++  DVD+VIEAV E   LK+ IF +L++ C
Sbjct: 98  ILHRLVQRKLMTQQNMQQLKAAIIPSHNYNDLHDVDLVIEAVFEDKQLKKTIFKKLDEVC 157

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
            P  ILATNTS+++++ +   T   D++IG HFF+PAH+M LLE VR   +S Q I+  M
Sbjct: 158 KPSAILATNTSSLNIDEIASVTKRPDKVIGMHFFAPAHLMRLLENVRGSNSSPQTIVTAM 217

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            +GK + KV V+VGNC GF  NR +F Y   +  L+  G     +D A+  +G  +G +Q
Sbjct: 218 DLGKQMNKVTVLVGNCKGFVGNRMYFYYIIESDFLLEEGAYPHEVDKALTDYGFTMGRYQ 277

Query: 373 LLDLAGYGV-------AAATSKEFDKAFPDRSFQ----SPLVDLLLKSGRNG-KANGKGL 420
           + DL+G  V            K+   + P+R        PL D+L+++GR+G K +GKG 
Sbjct: 278 VGDLSGNDVHYRVREMQGMLQKQQPTSAPERYRNGVRYCPLADMLVEAGRHGQKTDGKGW 337

Query: 421 YTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  GS+ P+ DP V+ +I++ R   NI    KP  ++EKEI+E +L+P++NE  ++LE
Sbjct: 338 YQYIAGSRMPRIDPQVIKMIDDHRTKHNI----KPRKISEKEIIERLLYPMINEGFKILE 393

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN---FFKPS 536
           +GI     D+D   + G ++P   GG +F+A+ VG   V   +++  +L G     +KPS
Sbjct: 394 DGIADNPWDIDMVWLHGYAWPRNTGGPMFYANTVGLPQVLKVIEERWKLAGASEPHWKPS 453

Query: 537 RFL 539
           + L
Sbjct: 454 KML 456


>gi|331663858|ref|ZP_08364768.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA143]
 gi|331059657|gb|EGI31634.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA143]
          Length = 714

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 EALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E + +G
Sbjct: 690 TPCERLVEMSKRG 702


>gi|432466550|ref|ZP_19708638.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE205]
 gi|432584594|ref|ZP_19820987.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE57]
 gi|433073590|ref|ZP_20260243.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE129]
 gi|433120937|ref|ZP_20306609.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE157]
 gi|433184063|ref|ZP_20368311.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE85]
 gi|430993356|gb|ELD09710.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE205]
 gi|431115590|gb|ELE19088.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE57]
 gi|431587494|gb|ELI58868.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE129]
 gi|431642538|gb|ELJ10261.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE157]
 gi|431705950|gb|ELJ70538.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE85]
          Length = 714

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCNRLVEMSERG 702


>gi|387612915|ref|YP_006116031.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
           hydratase; 3-hydroxyacyl-CoA dehydrogenase;
           3-hydroxybutyryl-CoA epimerase] [Escherichia coli ETEC
           H10407]
 gi|309702651|emb|CBJ01980.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
           hydratase; 3-hydroxyacyl-CoA dehydrogenase;
           3-hydroxybutyryl-CoA epimerase] [Escherichia coli ETEC
           H10407]
          Length = 714

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 277/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F  P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSGPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|332215007|ref|XP_003256628.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Nomascus
           leucogenys]
          Length = 723

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 177/569 (31%), Positives = 286/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 156 RHILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 213 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + F A+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFLAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 326 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     ++G HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVVGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 444 EVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K  D   P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQDLTGPTLPPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETHHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|417629608|ref|ZP_12279845.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_MHI813]
 gi|345372355|gb|EGX04319.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_MHI813]
          Length = 714

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 176/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A +  P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + DA+GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSGRDGDIGAVFGIGFPPFLGGPFRYIDALGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|432422685|ref|ZP_19665230.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE178]
 gi|430944297|gb|ELC64396.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE178]
          Length = 714

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 281/552 (50%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKFSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K+P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANG 417
           +A+  FG P+GP QLLD  G           + A+ +R S  + +V  +L   R G+ NG
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSASANVVSSILNDDRKGRKNG 580

Query: 418 KGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
           +G Y Y +KG  SK + DP++ P+I        +   G+   ++  ++ E  +  ++NE+
Sbjct: 581 RGFYLYGQKGRKSKKQVDPAIYPLI-------GVQGQGR---LSAPQVAERCVMLMLNEA 630

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F 
Sbjct: 631 VRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFT 690

Query: 535 PSRFLEERATKG 546
           P   L E + +G
Sbjct: 691 PCDRLVEMSERG 702


>gi|322831930|ref|YP_004211957.1| fatty acid oxidation complex, subunit alpha FadJ [Rahnella sp.
           Y9602]
 gi|384257038|ref|YP_005400972.1| multifunctional fatty acid oxidation complex subunit alpha
           [Rahnella aquatilis HX2]
 gi|321167131|gb|ADW72830.1| fatty acid oxidation complex, alpha subunit FadJ [Rahnella sp.
           Y9602]
 gi|380753014|gb|AFE57405.1| multifunctional fatty acid oxidation complex subunit alpha
           [Rahnella aquatilis HX2]
          Length = 733

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 188/559 (33%), Positives = 289/559 (51%), Gaps = 36/559 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALD-IAARRK-----PWIRSLHRTD 54
           +ML  +S+ +++  ++GL+D  V    LL+     AL+ +A  RK     PW   L    
Sbjct: 182 LMLTGRSVRAKQALRMGLVDDAVPYSILLQT----ALERVAKGRKSRPPLPWQARLAG-- 235

Query: 55  KLGSLSEAREVLKLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 113
             G L ++  +    R Q + KT  N P  +  +DV++ G+  G  SG   EAK F ELV
Sbjct: 236 --GPLGKSL-LFHFVRKQTQAKTHGNYPATEKIIDVVKTGLDQGSGSGYQAEAKAFGELV 292

Query: 114 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIY 172
           M   S  L  +FFA  A  K         +P  VR+  ++GGGLMG GIA        + 
Sbjct: 293 MTPESAALRGLFFASTALKKEKGGD---AEPLPVRRAGILGGGLMGGGIANVTATKAGLP 349

Query: 173 VVLKEVNSEYLLKGIKT----IEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 228
           V +K++N E +   +K     +E  VRG     +LT+++    + ++ G  DYS F  +D
Sbjct: 350 VRIKDINHEGIRHALKYSWDLLEKKVRGR----RLTRNEQQRQMMLISGTTDYSGFAQID 405

Query: 229 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 288
           +V+EAV E + LKQ + +E+E+   PH I A+NTS++ ++ + E+    +++IG H+FSP
Sbjct: 406 IVVEAVFEDLLLKQAMVAEIEQNAAPHTIFASNTSSLPIHKIAEQADRPEQVIGLHYFSP 465

Query: 289 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLL 347
              MPL+E++    TSAQ I   +++ +   K  +VVG+  GF VNR   PY +++AR L
Sbjct: 466 VDKMPLVEVIPHAGTSAQTISTTVSLARKQGKTAIVVGDSAGFYVNRILAPYINEAARCL 525

Query: 348 VSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLL 407
           ++ G  V  ID A+ +FG P+GP QLLD  G  V          AF +R       D +L
Sbjct: 526 LA-GEPVDHIDKALVNFGFPVGPIQLLDEVGIDVGTKIGPILVDAFGERFAAPSGFDAVL 584

Query: 408 KSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           K  R G+ NGKG Y Y +  +      V P I    RL N+ P    +  +E EI    +
Sbjct: 585 KDDRKGRKNGKGFYLYGQKGRATKKKQVDPAI---YRLLNVTP---KVQQSEDEIAHRCV 638

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
             ++NE+ R L+E ++  A D D  +V G+ FP + GG   + D +G   V  +L++ + 
Sbjct: 639 MLMLNEAVRCLDENVIRSARDGDLGAVFGIGFPPFLGGPFRYMDQLGIASVVKTLERLAH 698

Query: 528 LYGNFFKPSRFLEERATKG 546
            YG  F P   L  RA +G
Sbjct: 699 QYGERFTPCEGLLRRAHQG 717


>gi|424072849|ref|ZP_17810269.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
 gi|407996880|gb|EKG37333.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
           avellanae str. ISPaVe037]
          Length = 721

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/567 (30%), Positives = 285/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A  G       SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASS 719


>gi|331684013|ref|ZP_08384609.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H299]
 gi|450191006|ref|ZP_21891064.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli SEPT362]
 gi|331078965|gb|EGI50167.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H299]
 gi|449319906|gb|EMD09950.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli SEPT362]
          Length = 714

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 279/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAQPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E + +G
Sbjct: 690 TPCERLVEMSKRG 702


>gi|332215009|ref|XP_003256629.1| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Nomascus
           leucogenys]
          Length = 627

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 177/569 (31%), Positives = 286/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 60  RHILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI-- 116

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 117 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 169

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + F A+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 170 RALQYAFLAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 229

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 230 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVF 287

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     ++G HFFSPAHVM LL
Sbjct: 288 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVVGTHFFSPAHVMKLL 347

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 348 EVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 407

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K  D   P            +R +  P+ 
Sbjct: 408 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQDLTGPTLPPGTPARKRGNRRY-CPIP 466

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ E
Sbjct: 467 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETHHI----EPRTISQDE 522

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 523 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 582

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 583 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 611


>gi|419192393|ref|ZP_13735846.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7E]
 gi|378038457|gb|EHW00972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7E]
          Length = 709

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 162 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 217

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 218 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 277

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 278 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 335

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 336 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 395

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 396 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 455

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 456 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 515

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 516 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 574

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 575 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 622

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 623 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 682

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 683 RFTPCERLVEMGARG 697


>gi|417592637|ref|ZP_12243333.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2534-86]
 gi|345338476|gb|EGW70906.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2534-86]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|415778407|ref|ZP_11489453.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3431]
 gi|315615610|gb|EFU96242.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3431]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPLS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|422974370|ref|ZP_16976280.1| fatty acid oxidation complex subunit alpha [Escherichia coli TA124]
 gi|371595749|gb|EHN84596.1| fatty acid oxidation complex subunit alpha [Escherichia coli TA124]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 281/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEV----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     +++    KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVSKKTEHKTQGNYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGISHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K  +VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E + +G
Sbjct: 690 TPCERLVEMSKRG 702


>gi|297624952|ref|YP_003706386.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
           radiovictrix DSM 17093]
 gi|297166132|gb|ADI15843.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Truepera
           radiovictrix DSM 17093]
          Length = 718

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 181/567 (31%), Positives = 275/567 (48%), Gaps = 25/567 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR-----LWALDIAARRKPWIRSLHRTDK 55
           M L  +S+ ++   K+GL+DA+   + L+  ++     L A ++ AR+            
Sbjct: 165 MALTGRSVYAKPALKMGLVDALSHPQGLVAAAKAAVRGLVAGEVTARKAGGGAQGGLKGL 224

Query: 56  LGSLSEAREVLKLARLQA-----KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 110
             +L E   + +L   QA     KKT  N+P     ++ I  G   G  +G+  EA+ F 
Sbjct: 225 RSALLERTPLNRLIYRQALEGVQKKTRGNLPAPVKIIETIRIGQEQGMQAGLEAEARNFA 284

Query: 111 ELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNN 170
           ELV    S+ LVH+FFA+ A  K P         R VR V ++G GLMGSGIA       
Sbjct: 285 ELVFSPESKALVHLFFAKNAAEKNPYAE----AARAVRTVGILGAGLMGSGIAQVSAEAG 340

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
             V+LK+ N    +KG  ++   +   V +G+   ++ +     +  V DY+ FK  D+V
Sbjct: 341 HQVILKDRNLSVAVKGKGSVWKELDKRVGKGRSAFER-DVIDARITAVEDYAAFKRADLV 399

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           IEAV+E V LK+ +  E+E       I ATNTS+I +  +   +   +++IG H+FSP  
Sbjct: 400 IEAVLEDVELKRSVLKEVEAVAQEELIFATNTSSIPIREIAAASRRPEQVIGMHYFSPVP 459

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350
            +PLLEI++T+ T   V+   + VG    K P+VVG+  GF   R    Y   A +L+  
Sbjct: 460 KLPLLEIIKTDATPDWVLGTALQVGLEQGKTPIVVGDAPGFYTTRILALYMNEALVLLDE 519

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ-SPLVDLLLKS 409
           G  V  ID AI+ FG P+GP  LLD  G  V A  +      F +R    +   + L+ +
Sbjct: 520 GARVQDIDRAIKDFGFPVGPITLLDEVGIDVGAKINGVLKAPFAERGIALAEGGEALMNA 579

Query: 410 GRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
           G  G+ N KG Y Y  G K +       + EE  R  +         V  + I E +   
Sbjct: 580 GFLGRKNRKGFYDYSSGKKGEK-----AVNEEVYRFFS----APRKEVARERIQERLPLI 630

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE+ R LEEG++    D D  +V G+ FP + GG  ++AD +G   V   L+K  + +
Sbjct: 631 MMNEAFRCLEEGVLSSPRDGDLGAVFGLGFPPFLGGPFWYADRLGPRTVLERLEKLERDH 690

Query: 530 GNFFKPSRFLEERATKGIPLSAPVSSS 556
           G  FKP+  L E A    P  A  +S 
Sbjct: 691 GPRFKPAELLREHAAADRPFYADAASE 717


>gi|417587359|ref|ZP_12238129.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_C165-02]
 gi|345336495|gb|EGW68931.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_C165-02]
          Length = 712

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG K K   DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 686 RFTPCERLVEMSKRG 700


>gi|419346010|ref|ZP_13887384.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13A]
 gi|419350424|ref|ZP_13891762.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13B]
 gi|419355892|ref|ZP_13897149.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13C]
 gi|419360985|ref|ZP_13902202.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13D]
 gi|432810034|ref|ZP_20043927.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE101]
 gi|378185458|gb|EHX46083.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13A]
 gi|378200154|gb|EHX60610.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13C]
 gi|378200602|gb|EHX61057.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13B]
 gi|378202632|gb|EHX63059.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13D]
 gi|431362802|gb|ELG49380.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE101]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|366160263|ref|ZP_09460125.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia sp. TW09308]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 282/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQERTVSRTLPIRERVMAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A       +   +KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMAGKKTEQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D+   P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDVAPAPLNSVGILGGGLMGGGIAYVTAG-KAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     + G V R  +   + +  L ++ G +DY  F   D++IEAV E++
Sbjct: 341 NAQGINHALKYSWDQLEGKVRRRHIKASERDKQLVLISGSMDYHGFSHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH I A+NTS++ ++ +    S   ++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAPHTIFASNTSSLPISDIAAHASRPGQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ +   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTLATTVKLAKKQGKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           +  + +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEATYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYRQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLAVQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E +  G
Sbjct: 688 RFTPCERLLEMSEHG 702


>gi|309784945|ref|ZP_07679578.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           1617]
 gi|308927315|gb|EFP72789.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           1617]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F ELVM   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVIAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|417122429|ref|ZP_11971687.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0246]
 gi|386147709|gb|EIG94149.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0246]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|424104093|ref|ZP_17838890.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1990]
 gi|425151060|ref|ZP_18550691.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           88.0221]
 gi|425324330|ref|ZP_18712715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1737]
 gi|428947960|ref|ZP_19020266.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           88.1467]
 gi|429002859|ref|ZP_19071020.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.0183]
 gi|444953699|ref|ZP_21271807.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0848]
 gi|390663927|gb|EIN41403.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1990]
 gi|408242653|gb|EKI65219.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1737]
 gi|408596330|gb|EKK70471.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           88.0221]
 gi|427208819|gb|EKV78908.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           88.1467]
 gi|427261857|gb|EKW27774.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           95.0183]
 gi|444563518|gb|ELV40514.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0848]
          Length = 712

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|417139094|ref|ZP_11982621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0259]
 gi|386157739|gb|EIH14079.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.0259]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|301647554|ref|ZP_07247352.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           146-1]
 gi|301074302|gb|EFK89108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           146-1]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDITAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|386619960|ref|YP_006139540.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Escherichia coli NA114]
 gi|387830270|ref|YP_003350207.1| hypothetical protein ECSF_2217 [Escherichia coli SE15]
 gi|432500875|ref|ZP_19742632.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE216]
 gi|432559587|ref|ZP_19796256.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE49]
 gi|432695202|ref|ZP_19930400.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE162]
 gi|432711391|ref|ZP_19946450.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE6]
 gi|432919851|ref|ZP_20123917.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE173]
 gi|432927738|ref|ZP_20129135.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE175]
 gi|432981762|ref|ZP_20170537.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE211]
 gi|433097204|ref|ZP_20283387.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE139]
 gi|433106648|ref|ZP_20292621.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE148]
 gi|281179427|dbj|BAI55757.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|333970461|gb|AEG37266.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Escherichia coli NA114]
 gi|431028452|gb|ELD41496.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE216]
 gi|431090807|gb|ELD96558.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE49]
 gi|431233290|gb|ELF28881.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE162]
 gi|431248720|gb|ELF42909.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE6]
 gi|431442879|gb|ELH23958.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE173]
 gi|431443536|gb|ELH24563.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE175]
 gi|431491071|gb|ELH70678.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE211]
 gi|431614785|gb|ELI83919.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE139]
 gi|431626575|gb|ELI95121.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE148]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 281/552 (50%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKFSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K+P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANG 417
           +A+  FG P+GP QLLD  G           + A+ +R S  + +V  +L   R G+ NG
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSASANVVSSILNDDRKGRKNG 580

Query: 418 KGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
           +G Y Y +KG  SK + DP++ P+I        +   G+   ++  ++ E  +  ++NE+
Sbjct: 581 RGFYLYGQKGRKSKKQVDPAIYPLI-------GVQGQGR---LSAPQVAERCVMLMLNEA 630

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F 
Sbjct: 631 VRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFT 690

Query: 535 PSRFLEERATKG 546
           P   L E + +G
Sbjct: 691 PCDRLVEMSERG 702


>gi|419366162|ref|ZP_13907323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13E]
 gi|378212471|gb|EHX72794.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC13E]
          Length = 712

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|424068433|ref|ZP_17805887.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
 gi|407997587|gb|EKG38023.1| fatty oxidation complex subunit alpha [Pseudomonas syringae pv.
           avellanae str. ISPaVe013]
          Length = 721

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/567 (30%), Positives = 285/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQGAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A  G       SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASS 719


>gi|301024178|ref|ZP_07187886.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           69-1]
 gi|419920497|ref|ZP_14438612.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli KD2]
 gi|432816094|ref|ZP_20049878.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE115]
 gi|300396665|gb|EFJ80203.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           69-1]
 gi|388384677|gb|EIL46392.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli KD2]
 gi|431364318|gb|ELG50862.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE115]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|218705870|ref|YP_002413389.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli UMN026]
 gi|293405806|ref|ZP_06649798.1| enoyl-CoA hydratase [Escherichia coli FVEC1412]
 gi|298381489|ref|ZP_06991088.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           FVEC1302]
 gi|300897024|ref|ZP_07115502.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           198-1]
 gi|419932995|ref|ZP_14450269.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 576-1]
 gi|422335646|ref|ZP_16416641.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           4_1_47FAA]
 gi|432354281|ref|ZP_19597554.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE2]
 gi|432402632|ref|ZP_19645384.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE26]
 gi|432426897|ref|ZP_19669397.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE181]
 gi|432461362|ref|ZP_19703511.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE204]
 gi|432476587|ref|ZP_19718585.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE208]
 gi|432518411|ref|ZP_19755599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE228]
 gi|432538533|ref|ZP_19775435.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE235]
 gi|432632127|ref|ZP_19868053.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE80]
 gi|432641842|ref|ZP_19877676.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE83]
 gi|432666737|ref|ZP_19902318.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE116]
 gi|432771308|ref|ZP_20005643.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE50]
 gi|432775433|ref|ZP_20009704.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE54]
 gi|432887322|ref|ZP_20101396.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE158]
 gi|432913520|ref|ZP_20119217.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE190]
 gi|432962570|ref|ZP_20152163.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE202]
 gi|433019415|ref|ZP_20207630.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE105]
 gi|433053948|ref|ZP_20241127.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE122]
 gi|433063804|ref|ZP_20250725.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE125]
 gi|433068653|ref|ZP_20255442.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE128]
 gi|433159385|ref|ZP_20344222.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE177]
 gi|433179198|ref|ZP_20363596.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE82]
 gi|254788655|sp|B7N5V2.1|FADJ_ECOLU RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|218432967|emb|CAR13861.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
           UMN026]
 gi|291428014|gb|EFF01041.1| enoyl-CoA hydratase [Escherichia coli FVEC1412]
 gi|298278931|gb|EFI20445.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           FVEC1302]
 gi|300359151|gb|EFJ75021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           198-1]
 gi|373243298|gb|EHP62809.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           4_1_47FAA]
 gi|388414793|gb|EIL74740.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 576-1]
 gi|430875454|gb|ELB98996.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE2]
 gi|430925103|gb|ELC45776.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE26]
 gi|430955150|gb|ELC73942.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE181]
 gi|430989052|gb|ELD05521.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE204]
 gi|431005203|gb|ELD20411.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE208]
 gi|431051033|gb|ELD60709.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE228]
 gi|431069422|gb|ELD77751.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE235]
 gi|431170327|gb|ELE70521.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE80]
 gi|431181725|gb|ELE81587.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE83]
 gi|431201031|gb|ELE99749.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE116]
 gi|431314099|gb|ELG02052.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE50]
 gi|431318045|gb|ELG05814.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE54]
 gi|431416320|gb|ELG98807.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE158]
 gi|431439820|gb|ELH21153.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE190]
 gi|431473834|gb|ELH53666.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE202]
 gi|431530892|gb|ELI07568.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE105]
 gi|431570020|gb|ELI42949.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE122]
 gi|431581123|gb|ELI53577.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE125]
 gi|431583725|gb|ELI55720.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE128]
 gi|431677617|gb|ELJ43692.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE177]
 gi|431700844|gb|ELJ65772.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE82]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|440746454|ref|ZP_20925738.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae BRIP39023]
 gi|440371254|gb|ELQ08104.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas syringae BRIP39023]
          Length = 721

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/567 (30%), Positives = 285/567 (50%), Gaps = 36/567 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L++ +     D  A+R+P +  L    KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPDKLQAAALDLIQRAISGEFDHKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F ++     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTAAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      + G + +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E     + ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S + +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L  + R G+ N
Sbjct: 526 KIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP+VL    PI+ E R             V++++IV  ++ 
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
            G  ++P+  L E A  G       SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASS 719


>gi|419216424|ref|ZP_13759424.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8D]
 gi|419268062|ref|ZP_13810414.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10C]
 gi|378061438|gb|EHW23623.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8D]
 gi|378110713|gb|EHW72307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10C]
          Length = 712

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|424135291|ref|ZP_17867776.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA10]
 gi|390696619|gb|EIN71067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA10]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGICFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|410086602|ref|ZP_11283310.1| Enoyl-CoA hydratase [Morganella morganii SC01]
 gi|409766822|gb|EKN50910.1| Enoyl-CoA hydratase [Morganella morganii SC01]
          Length = 717

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 170/556 (30%), Positives = 275/556 (49%), Gaps = 30/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  + + +++  K+ L D +V  + LL+ +   AL     ++  +    R +K+  L 
Sbjct: 172 MMLTGRQLRAKQAVKMRLADDIVPPDILLETAVARALSANPAQRDPVPFRQRLEKMKGLR 231

Query: 61  EAREVLKLARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
           +   + ++ R Q ++ +  + P  +  +DV++ G+  G  +G   EA  F +L +   S 
Sbjct: 232 DI--IFRITRSQVRRRSGGHYPAAEQIIDVVQCGLEKGREAGFKAEAAAFGKLAVTPVSG 289

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT-AHILNNIYVVLKEV 178
            L H+FFA  A  K    +  G+KP  +  VAV+GGGLMG+GIAT       + V +K+V
Sbjct: 290 ALRHLFFASTALKKE---SADGVKPAELHHVAVLGGGLMGAGIATITRQRAGLPVRIKDV 346

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           + E   K +     ++   V R +L+  +    +  + G  DY  F  +D V EAV ES+
Sbjct: 347 SQEGANKALAFFWQHLSKQVKRRRLSPRERTQLMSGMTGTTDYRGFHRIDFVAEAVFESL 406

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E    P  I A+NTS++ +  +  K S  +++IG H+FSPA  MPL EI+
Sbjct: 407 ALKQQMIAEIEAVTSPDTIFASNTSSLPIRDIAAKASRPEKVIGLHYFSPAEKMPLAEII 466

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
             E T A  +   + + +   K  +VVG+  GF VNR   PY   A   ++ G    +ID
Sbjct: 467 PHEGTDAVTLATTLQLARRQGKTAIVVGDKAGFYVNRILAPYITEALRCLTEGEPPEKID 526

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGK 418
            A+  FG PIGP  LLD  G  V        + AF +R    P +D L +  R G+ N +
Sbjct: 527 KALTDFGFPIGPVALLDEVGIDVGTKIMPVLEAAFGERFALPPQLDALFRDNRLGRKNKR 586

Query: 419 GLYTYE---------KGSKPKPDPSVLPI--IEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           G Y Y          + +  K D ++ P+  I    RL            T +EI E  L
Sbjct: 587 GFYDYSPLPWWKRCGRKAPRKADKAIYPLLGITVQERL------------TSQEITERCL 634

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
             ++NE+ R L+E ++   +D D  +V G+ F  + GG  ++ D+V A  +   L   + 
Sbjct: 635 MMMLNEAVRTLDEQVIRSPADGDVGAVFGIGFSPFLGGPFYYMDSVSAVVMTEKLTALAA 694

Query: 528 LYGNFFKPSRFLEERA 543
            YG+ F P   L++RA
Sbjct: 695 RYGDRFTPCEALQQRA 710


>gi|334145451|ref|YP_004538661.1| NAD-binding 3-hydroxyacyl-CoA dehydrogenase [Novosphingobium sp.
           PP1Y]
 gi|333937335|emb|CCA90694.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding [Novosphingobium sp.
           PP1Y]
          Length = 671

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 171/537 (31%), Positives = 269/537 (50%), Gaps = 26/537 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M  L + +++     +GL+DAV     L++ +   A  +A R++P    L R  +   + 
Sbjct: 152 MAALGEPMSAARAKDIGLVDAVTADGALVEHALGLARTVA-RQRP----LPRVSEQRVVP 206

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
           +   + +     A++ A  +      +  IE+        G+  E   F  L+    S  
Sbjct: 207 DPEAIAQFRHTHARRIA-GLHASTMAITCIEKAAELPFAEGLAFERATFMRLMADPRSAA 265

Query: 121 LVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
             HVFFA+R  +++  + +DI    R V +V +IG G MGSGIA   +   + V L E +
Sbjct: 266 QRHVFFAERQAARIDGIGSDIA--ARSVERVGIIGAGTMGSGIAINFLSAGLAVTLLETS 323

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           ++ L +G + I       V +G++T  +A  AL +L   LD+      D+VIEAV E++ 
Sbjct: 324 ADALKRGQEQIANTFSSNVAKGRMTARQAEQALALLDVKLDFDALGACDLVIEAVFENMN 383

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +K+ IF+ L+       ILA+NTS +DL+ +   TS    ++G HFFSPAH+M LLE+VR
Sbjct: 384 IKKDIFARLDHVAREGAILASNTSYLDLDEIAATTSRPSDVVGLHFFSPAHIMKLLEVVR 443

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              T+  V++  M + + I KV VV G   GF  NR        A  L+  G    +ID 
Sbjct: 444 GNCTAPDVLVTAMALARRIGKVAVVAGVTPGFIGNRLLRCRQNEAMNLLLEGATPEQIDC 503

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
             R+FG+P+GPFQ+ DLAG  +             D +    + + L   GR G+  G G
Sbjct: 504 VHRNFGMPMGPFQMTDLAGVDIG---------WHRDPARVETIREALCAEGRWGQKTGAG 554

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            Y Y++  KP P P V  I++E R+           ++++ EI+   LFP+VNE   +L 
Sbjct: 555 FYDYDERRKPHPSPRVAEILQEFRKKRK----SSERAISDDEILARTLFPMVNEGALLLL 610

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
           EG   RASD+D A V G  +P++RGG +FWA   G   +  +L    ++YG    P+
Sbjct: 611 EGKAQRASDIDVAWVYGYGWPAWRGGPMFWAREQGFEKIAAAL----EMYGFVVAPN 663


>gi|191165478|ref|ZP_03027319.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B7A]
 gi|260856384|ref|YP_003230275.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. 11368]
 gi|260869062|ref|YP_003235464.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O111:H- str. 11128]
 gi|293446676|ref|ZP_06663098.1| fatty oxidation complex [Escherichia coli B088]
 gi|309796788|ref|ZP_07691191.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           145-7]
 gi|415784193|ref|ZP_11492156.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EPECa14]
 gi|415822778|ref|ZP_11511297.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           OK1180]
 gi|417154945|ref|ZP_11993074.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0497]
 gi|417204521|ref|ZP_12018781.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           JB1-95]
 gi|417299961|ref|ZP_12087188.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           900105 (10e)]
 gi|417581859|ref|ZP_12232661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_B2F1]
 gi|417597661|ref|ZP_12248300.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3030-1]
 gi|417667755|ref|ZP_12317300.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_O31]
 gi|419197851|ref|ZP_13741237.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8A]
 gi|419204346|ref|ZP_13747527.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8B]
 gi|419210549|ref|ZP_13753626.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8C]
 gi|419222355|ref|ZP_13765276.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8E]
 gi|419227622|ref|ZP_13770476.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9A]
 gi|419233186|ref|ZP_13775962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9B]
 gi|419238649|ref|ZP_13781364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9C]
 gi|419244117|ref|ZP_13786755.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9D]
 gi|419249940|ref|ZP_13792523.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9E]
 gi|419255808|ref|ZP_13798323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10A]
 gi|419262028|ref|ZP_13804445.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10B]
 gi|419273520|ref|ZP_13815815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10D]
 gi|419285051|ref|ZP_13827222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10F]
 gi|419876201|ref|ZP_14397971.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9534]
 gi|419884579|ref|ZP_14405500.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9545]
 gi|419889127|ref|ZP_14409557.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9570]
 gi|419895595|ref|ZP_14415391.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9574]
 gi|419905137|ref|ZP_14424109.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM9942]
 gi|419909058|ref|ZP_14427693.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O26:H11 str. CVM10026]
 gi|420091081|ref|ZP_14602839.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9602]
 gi|420096119|ref|ZP_14607554.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9634]
 gi|420102230|ref|ZP_14613255.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9455]
 gi|420111084|ref|ZP_14620961.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9553]
 gi|420116680|ref|ZP_14626057.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM10021]
 gi|420122109|ref|ZP_14631119.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM10030]
 gi|420127373|ref|ZP_14636009.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM10224]
 gi|420131852|ref|ZP_14640255.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM9952]
 gi|424753000|ref|ZP_18180965.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CFSAN001629]
 gi|424761879|ref|ZP_18189408.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CFSAN001630]
 gi|424774326|ref|ZP_18201341.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CFSAN001632]
 gi|425380402|ref|ZP_18764440.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1865]
 gi|425423154|ref|ZP_18804322.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           0.1288]
 gi|190904401|gb|EDV64109.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B7A]
 gi|257755033|dbj|BAI26535.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O26:H11 str. 11368]
 gi|257765418|dbj|BAI36913.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O111:H- str. 11128]
 gi|291323506|gb|EFE62934.1| fatty oxidation complex [Escherichia coli B088]
 gi|308119547|gb|EFO56809.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           145-7]
 gi|323156494|gb|EFZ42649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EPECa14]
 gi|323176733|gb|EFZ62323.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           OK1180]
 gi|345337630|gb|EGW70062.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_B2F1]
 gi|345352890|gb|EGW85128.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3030-1]
 gi|378046408|gb|EHW08787.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8A]
 gi|378047781|gb|EHW10139.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8B]
 gi|378053245|gb|EHW15545.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8C]
 gi|378064930|gb|EHW27080.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC8E]
 gi|378073534|gb|EHW35581.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9A]
 gi|378076928|gb|EHW38926.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9B]
 gi|378083688|gb|EHW45619.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9C]
 gi|378090053|gb|EHW51893.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9D]
 gi|378094962|gb|EHW56753.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC9E]
 gi|378099603|gb|EHW61307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10A]
 gi|378105718|gb|EHW67357.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10B]
 gi|378116007|gb|EHW77540.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10D]
 gi|378130395|gb|EHW91759.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10F]
 gi|386168034|gb|EIH34550.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0497]
 gi|386198330|gb|EIH92513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           JB1-95]
 gi|386256796|gb|EIJ12290.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           900105 (10e)]
 gi|388345468|gb|EIL11239.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9534]
 gi|388353818|gb|EIL18792.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9545]
 gi|388358410|gb|EIL22867.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9570]
 gi|388360357|gb|EIL24576.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9574]
 gi|388365962|gb|EIL29724.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM9942]
 gi|388374019|gb|EIL37242.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O26:H11 str. CVM10026]
 gi|394384460|gb|EJE62020.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9602]
 gi|394388984|gb|EJE66182.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM10224]
 gi|394390351|gb|EJE67365.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CVM9634]
 gi|394399651|gb|EJE75655.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9553]
 gi|394402971|gb|EJE78647.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM10021]
 gi|394412679|gb|EJE86809.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CVM9455]
 gi|394423194|gb|EJE96461.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM10030]
 gi|394430921|gb|EJF03190.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CVM9952]
 gi|397784901|gb|EJK95754.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_O31]
 gi|408296468|gb|EKJ14709.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1865]
 gi|408343709|gb|EKJ58103.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           0.1288]
 gi|421934275|gb|EKT92050.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H8 str. CFSAN001632]
 gi|421936046|gb|EKT93714.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O26:H11 str. CFSAN001629]
 gi|421941754|gb|EKT99130.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O111:H11 str. CFSAN001630]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|420326498|ref|ZP_14828249.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           CCH060]
 gi|391250015|gb|EIQ09238.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           CCH060]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|157155802|ref|YP_001463687.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli E24377A]
 gi|417640098|ref|ZP_12290239.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TX1999]
 gi|419171021|ref|ZP_13714907.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7A]
 gi|419181659|ref|ZP_13725272.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7C]
 gi|419187103|ref|ZP_13730617.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7D]
 gi|420386409|ref|ZP_14885759.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EPECa12]
 gi|433130908|ref|ZP_20316343.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE163]
 gi|433135570|ref|ZP_20320914.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE166]
 gi|166972668|sp|A7ZPF8.1|FADJ_ECO24 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|157077832|gb|ABV17540.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           E24377A]
 gi|345393100|gb|EGX22878.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TX1999]
 gi|378015065|gb|EHV77962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7A]
 gi|378023292|gb|EHV85969.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7C]
 gi|378029095|gb|EHV91711.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7D]
 gi|391305119|gb|EIQ62914.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EPECa12]
 gi|431645705|gb|ELJ13249.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE163]
 gi|431656248|gb|ELJ23269.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE166]
          Length = 714

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|153006999|ref|YP_001381324.1| multifunctional fatty acid oxidation complex subunit alpha
           [Anaeromyxobacter sp. Fw109-5]
 gi|152030572|gb|ABS28340.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Anaeromyxobacter sp.
           Fw109-5]
          Length = 723

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 189/563 (33%), Positives = 296/563 (52%), Gaps = 28/563 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA---RRKPWIRS--LHRTDK 55
           ++L  K++ +++  K+GL+D VV S+ L+ V+R  AL +A    RR+P  ++  + R  +
Sbjct: 173 LILAGKTVKAKKALKIGLVDEVVPSQLLVSVARQRALALATGKLRREPRRKASPVERATR 232

Query: 56  LGSLSEAREVLKLARLQAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 110
           + +L E R   +L   QA+K     T    P     L+ IE G   G   G+ KEA++F 
Sbjct: 233 V-ALEENRVGRELLFRQARKAVLAKTKGMYPAPVRALEAIEYGYQKGFAKGLEKEAQLFG 291

Query: 111 ELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNN 170
           +L + + +R L+ +FFA  A  K   V D  ++PR  R+V V+GGGLMGSGI+       
Sbjct: 292 QLAVSEVARRLMEIFFATTALKKDTGVDDPAVRPRPARRVGVLGGGLMGSGISFVTANAG 351

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
           I V ++E +     K + ++ A +   V R  + + + +  ++++    D+S +  VD++
Sbjct: 352 IPVRIRERDDAAAGKALGSVRALLDERVKRRSIDRLERDERMRLVTATTDWSGYAAVDVL 411

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           IEAV E + LKQ++    E A  P  I A+NTS+I +  + E ++  + ++G H+FSP  
Sbjct: 412 IEAVFEDLALKQEMVRAFE-AVNPTGIFASNTSSIPITKIAEASAHPETVLGMHYFSPVQ 470

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350
            MPLLEI+ TE+TS +     + +GK   K  +VVG+  GF  +R   PY   A  L+  
Sbjct: 471 KMPLLEIIVTEKTSKEATATAVALGKKQGKTVIVVGDGPGFYTSRILAPYMNEAAELLVE 530

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSG 410
           G  V  +D A+  FG P+GP  LLD  G  V     K    AF  R      +  ++K+G
Sbjct: 531 GAAVEDLDRALVEFGFPVGPITLLDEVGIDVGEKVGKILHDAFGARMASPAALHDVVKAG 590

Query: 411 RNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGG---KPISVTEKEIVEMI 466
           R G+ N KG YTY +  K K  D +V           +++PGG   KP +    EI E +
Sbjct: 591 RLGRKNRKGFYTYGEDKKEKRVDVTVY----------DLLPGGRSRKPFA--HDEIRERV 638

Query: 467 LFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWS 526
           +  +VNE+ R L EGI+  A D D  +V G+ FP +RGG   +AD +G   +   L++  
Sbjct: 639 VLQMVNEAIRCLGEGILRSARDGDVGAVFGLGFPPFRGGPFRYADKLGPKELLARLERLR 698

Query: 527 QLYGNFFKPSRFLEERATKGIPL 549
             +G  F P+  L E A  G P 
Sbjct: 699 ARHGERFAPAPLLVEHAAAGRPF 721


>gi|424469529|ref|ZP_17919374.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA41]
 gi|390767645|gb|EIO36720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA41]
          Length = 712

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPENVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|82777753|ref|YP_404102.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella dysenteriae Sd197]
 gi|123742102|sp|Q32DJ4.1|FADJ_SHIDS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|81241901|gb|ABB62611.1| putative enzyme [Shigella dysenteriae Sd197]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F ELVM   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVIAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|432750812|ref|ZP_19985416.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE29]
 gi|431296794|gb|ELF86505.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE29]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|418041755|ref|ZP_12679970.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli W26]
 gi|383475326|gb|EID67290.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli W26]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|168748199|ref|ZP_02773221.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755101|ref|ZP_02780108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4401]
 gi|168767975|ref|ZP_02792982.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4486]
 gi|168772924|ref|ZP_02797931.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780206|ref|ZP_02805213.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787254|ref|ZP_02812261.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC869]
 gi|168798519|ref|ZP_02823526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC508]
 gi|195935722|ref|ZP_03081104.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. EC4024]
 gi|208808657|ref|ZP_03250994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208814182|ref|ZP_03255511.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820502|ref|ZP_03260822.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209400826|ref|YP_002271753.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. EC4115]
 gi|254794233|ref|YP_003079070.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. TW14359]
 gi|261223205|ref|ZP_05937486.1| fused enoyl-CoA hydratase and epimerase and isomerase,
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259244|ref|ZP_05951777.1| fused enoyl-CoA hydratase and epimerase and isomerase,
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
           O157:H7 str. FRIK966]
 gi|416775623|ref|ZP_11874463.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. G5101]
 gi|416787301|ref|ZP_11879372.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H- str. 493-89]
 gi|416798940|ref|ZP_11884289.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H- str. H 2687]
 gi|416809310|ref|ZP_11888973.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O55:H7 str. 3256-97]
 gi|416830816|ref|ZP_11898821.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. LSU-61]
 gi|419070459|ref|ZP_13616082.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3E]
 gi|419076420|ref|ZP_13621938.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3F]
 gi|419081544|ref|ZP_13626992.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4A]
 gi|419087325|ref|ZP_13632682.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4B]
 gi|419093345|ref|ZP_13638630.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4C]
 gi|419099023|ref|ZP_13644222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4D]
 gi|419104917|ref|ZP_13650046.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4E]
 gi|419121309|ref|ZP_13666265.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5B]
 gi|420270734|ref|ZP_14773092.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA22]
 gi|420276357|ref|ZP_14778641.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA40]
 gi|420281267|ref|ZP_14783505.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW06591]
 gi|420287475|ref|ZP_14789666.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW10246]
 gi|420299173|ref|ZP_14801222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW09109]
 gi|420304998|ref|ZP_14806994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW10119]
 gi|420310593|ref|ZP_14812526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1738]
 gi|420315843|ref|ZP_14817719.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1734]
 gi|421813312|ref|ZP_16249034.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0416]
 gi|421824978|ref|ZP_16260345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK920]
 gi|424084857|ref|ZP_17821360.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA517]
 gi|424091314|ref|ZP_17827259.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1996]
 gi|424097900|ref|ZP_17833232.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1985]
 gi|424116686|ref|ZP_17850547.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA3]
 gi|424129042|ref|ZP_17861963.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA9]
 gi|424154203|ref|ZP_17885174.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA24]
 gi|424248025|ref|ZP_17890657.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA25]
 gi|424325583|ref|ZP_17896579.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA28]
 gi|424463177|ref|ZP_17913646.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA39]
 gi|424481823|ref|ZP_17930819.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW07945]
 gi|424487972|ref|ZP_17936556.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW09098]
 gi|424494571|ref|ZP_17942332.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW09195]
 gi|424501341|ref|ZP_17948262.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4203]
 gi|424507575|ref|ZP_17954001.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4196]
 gi|424514904|ref|ZP_17959611.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW14313]
 gi|424521217|ref|ZP_17965358.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW14301]
 gi|424539280|ref|ZP_17982246.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4013]
 gi|424545307|ref|ZP_17987749.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4402]
 gi|424551555|ref|ZP_17993437.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4439]
 gi|424557742|ref|ZP_17999175.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4436]
 gi|424564089|ref|ZP_18005106.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4437]
 gi|424570212|ref|ZP_18010793.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4448]
 gi|424576376|ref|ZP_18016475.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1845]
 gi|424582221|ref|ZP_18021886.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1863]
 gi|425105064|ref|ZP_18507393.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           5.2239]
 gi|425132688|ref|ZP_18533549.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.2524]
 gi|425139154|ref|ZP_18539557.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           10.0833]
 gi|425145012|ref|ZP_18545021.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           10.0869]
 gi|425156944|ref|ZP_18556222.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA34]
 gi|425181207|ref|ZP_18578913.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1999]
 gi|425194242|ref|ZP_18591025.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           NE1487]
 gi|425200681|ref|ZP_18596909.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           NE037]
 gi|425207099|ref|ZP_18602911.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK2001]
 gi|425243932|ref|ZP_18637252.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MA6]
 gi|425255919|ref|ZP_18648451.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           CB7326]
 gi|425262134|ref|ZP_18654163.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC96038]
 gi|425268171|ref|ZP_18659815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5412]
 gi|425295611|ref|ZP_18685827.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA38]
 gi|425312276|ref|ZP_18701474.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1735]
 gi|425318227|ref|ZP_18707032.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1736]
 gi|425330609|ref|ZP_18718494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1846]
 gi|425336773|ref|ZP_18724176.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1847]
 gi|425343181|ref|ZP_18730096.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1848]
 gi|425348978|ref|ZP_18735474.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1849]
 gi|425355276|ref|ZP_18741364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1850]
 gi|425361236|ref|ZP_18746907.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1856]
 gi|425367411|ref|ZP_18752603.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1862]
 gi|425373781|ref|ZP_18758444.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1864]
 gi|425386631|ref|ZP_18770208.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1866]
 gi|425393353|ref|ZP_18776480.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1868]
 gi|425399449|ref|ZP_18782176.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1869]
 gi|425405531|ref|ZP_18787784.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1870]
 gi|428966568|ref|ZP_19037345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           90.0091]
 gi|428972320|ref|ZP_19042682.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           90.0039]
 gi|429033614|ref|ZP_19099156.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0939]
 gi|429039717|ref|ZP_19104847.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0932]
 gi|429056364|ref|ZP_19120703.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.1742]
 gi|429068204|ref|ZP_19131685.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0672]
 gi|429074102|ref|ZP_19137365.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0678]
 gi|444925886|ref|ZP_21245201.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           09BKT078844]
 gi|444931601|ref|ZP_21250653.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0814]
 gi|444937007|ref|ZP_21255797.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0815]
 gi|444942633|ref|ZP_21261164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0816]
 gi|444948194|ref|ZP_21266513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0839]
 gi|444970329|ref|ZP_21287702.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1793]
 gi|444975583|ref|ZP_21292725.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1805]
 gi|444981049|ref|ZP_21297967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ATCC
           700728]
 gi|444991701|ref|ZP_21308356.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA19]
 gi|444997016|ref|ZP_21313524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA13]
 gi|445002569|ref|ZP_21318967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA2]
 gi|445008072|ref|ZP_21324321.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA47]
 gi|445013097|ref|ZP_21329215.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA48]
 gi|445018979|ref|ZP_21334952.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA8]
 gi|445024483|ref|ZP_21340316.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           7.1982]
 gi|445035221|ref|ZP_21350761.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1762]
 gi|445040848|ref|ZP_21356234.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA35]
 gi|445046040|ref|ZP_21361302.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.4880]
 gi|452970986|ref|ZP_21969213.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O157:H7 str. EC4009]
 gi|254788660|sp|B5YXY4.1|FADJ_ECO5E RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|187771297|gb|EDU35141.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017231|gb|EDU55353.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4113]
 gi|189002100|gb|EDU71086.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357657|gb|EDU76076.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363024|gb|EDU81443.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4486]
 gi|189372935|gb|EDU91351.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC869]
 gi|189379042|gb|EDU97458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC508]
 gi|208728458|gb|EDZ78059.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208735459|gb|EDZ84146.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740625|gb|EDZ88307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209162226|gb|ACI39659.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O157:H7 str. EC4115]
 gi|209764648|gb|ACI80636.1| putative enzyme [Escherichia coli]
 gi|209764652|gb|ACI80638.1| putative enzyme [Escherichia coli]
 gi|209764656|gb|ACI80640.1| putative enzyme [Escherichia coli]
 gi|254593633|gb|ACT72994.1| fused enoyl-CoA hydratase and epimerase and isomerase,
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli
           O157:H7 str. TW14359]
 gi|320641168|gb|EFX10647.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. G5101]
 gi|320646384|gb|EFX15307.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H- str. 493-89]
 gi|320651654|gb|EFX20034.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H- str. H 2687]
 gi|320657405|gb|EFX25207.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320667685|gb|EFX34596.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O157:H7 str. LSU-61]
 gi|377912289|gb|EHU76452.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3E]
 gi|377921461|gb|EHU85460.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC3F]
 gi|377926174|gb|EHU90109.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4A]
 gi|377930515|gb|EHU94398.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4B]
 gi|377941787|gb|EHV05524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4C]
 gi|377942133|gb|EHV05869.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4D]
 gi|377947400|gb|EHV11067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC4E]
 gi|377966533|gb|EHV29944.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5B]
 gi|390641802|gb|EIN21226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1996]
 gi|390642583|gb|EIN21972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FDA517]
 gi|390662003|gb|EIN39631.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1985]
 gi|390677609|gb|EIN53627.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA3]
 gi|390683582|gb|EIN59250.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA9]
 gi|390714246|gb|EIN87160.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA22]
 gi|390722914|gb|EIN95546.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA25]
 gi|390724209|gb|EIN96777.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA24]
 gi|390727679|gb|EIO00080.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA28]
 gi|390757767|gb|EIO27237.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA40]
 gi|390768844|gb|EIO37832.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA39]
 gi|390781554|gb|EIO49231.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW06591]
 gi|390790232|gb|EIO57660.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW10246]
 gi|390790792|gb|EIO58194.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW07945]
 gi|390805932|gb|EIO72855.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW09098]
 gi|390806868|gb|EIO73770.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW09109]
 gi|390816020|gb|EIO82532.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW10119]
 gi|390826032|gb|EIO91902.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4203]
 gi|390830594|gb|EIO96111.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW09195]
 gi|390831299|gb|EIO96708.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4196]
 gi|390845992|gb|EIP09608.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW14301]
 gi|390846714|gb|EIP10285.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW14313]
 gi|390865611|gb|EIP27614.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4013]
 gi|390870809|gb|EIP32278.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4402]
 gi|390878696|gb|EIP39518.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4439]
 gi|390883653|gb|EIP44066.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4436]
 gi|390893550|gb|EIP53095.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4437]
 gi|390895930|gb|EIP55336.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC4448]
 gi|390899872|gb|EIP59108.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1738]
 gi|390907833|gb|EIP66674.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1734]
 gi|390919156|gb|EIP77514.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1863]
 gi|390920279|gb|EIP78560.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1845]
 gi|408068030|gb|EKH02458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK920]
 gi|408070461|gb|EKH04820.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA34]
 gi|408097232|gb|EKH30131.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK1999]
 gi|408108583|gb|EKH40586.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           NE1487]
 gi|408115018|gb|EKH46494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           NE037]
 gi|408121416|gb|EKH52377.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           FRIK2001]
 gi|408160211|gb|EKH88255.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MA6]
 gi|408173357|gb|EKI00387.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           CB7326]
 gi|408180415|gb|EKI07027.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC96038]
 gi|408182813|gb|EKI09297.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5412]
 gi|408217470|gb|EKI41720.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA38]
 gi|408227353|gb|EKI50949.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1735]
 gi|408238414|gb|EKI61216.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1736]
 gi|408247071|gb|EKI69298.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1846]
 gi|408256199|gb|EKI77588.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1847]
 gi|408259145|gb|EKI80341.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1848]
 gi|408265519|gb|EKI86209.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1849]
 gi|408274698|gb|EKI94686.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1850]
 gi|408277131|gb|EKI96945.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1856]
 gi|408286830|gb|EKJ05745.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1862]
 gi|408291014|gb|EKJ09661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1864]
 gi|408307996|gb|EKJ25282.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1866]
 gi|408308036|gb|EKJ25321.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1868]
 gi|408319198|gb|EKJ35353.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1869]
 gi|408325949|gb|EKJ41792.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           EC1870]
 gi|408550210|gb|EKK27555.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           5.2239]
 gi|408579416|gb|EKK54877.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           10.0833]
 gi|408581105|gb|EKK56460.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.2524]
 gi|408591733|gb|EKK66154.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           10.0869]
 gi|408601136|gb|EKK74952.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           8.0416]
 gi|427222096|gb|EKV90895.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           90.0091]
 gi|427228062|gb|EKV96546.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           90.0039]
 gi|427283576|gb|EKW47784.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0939]
 gi|427291890|gb|EKW55263.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.0932]
 gi|427313055|gb|EKW75189.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           97.1742]
 gi|427319462|gb|EKW81274.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0672]
 gi|427328447|gb|EKW89814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0678]
 gi|444538241|gb|ELV18119.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0814]
 gi|444539785|gb|ELV19494.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           09BKT078844]
 gi|444547529|gb|ELV26115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0815]
 gi|444557382|gb|ELV34729.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0839]
 gi|444558353|gb|ELV35640.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0816]
 gi|444579359|gb|ELV55354.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1793]
 gi|444593391|gb|ELV68610.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli ATCC
           700728]
 gi|444595410|gb|ELV70513.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1805]
 gi|444607051|gb|ELV81647.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA13]
 gi|444607570|gb|ELV82146.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA19]
 gi|444615922|gb|ELV90105.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA2]
 gi|444623424|gb|ELV97345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA47]
 gi|444624739|gb|ELV98621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA48]
 gi|444629643|gb|ELW03327.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA8]
 gi|444638638|gb|ELW11970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           7.1982]
 gi|444645172|gb|ELW18246.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.1762]
 gi|444654498|gb|ELW27164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli PA35]
 gi|444659894|gb|ELW32281.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.4880]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|187730524|ref|YP_001881164.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella boydii CDC 3083-94]
 gi|254788616|sp|B2TWV4.1|FADJ_SHIB3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|187427516|gb|ACD06790.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii CDC
           3083-94]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|420381297|ref|ZP_14880748.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           225-75]
 gi|391300387|gb|EIQ58308.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           225-75]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCASHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|415828918|ref|ZP_11515350.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           OK1357]
 gi|323184339|gb|EFZ69715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           OK1357]
          Length = 712

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 281 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|417690473|ref|ZP_12339695.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           5216-82]
 gi|332088475|gb|EGI93593.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           5216-82]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|62318895|dbj|BAD93971.1| AIM1 protein [Arabidopsis thaliana]
          Length = 163

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/166 (73%), Positives = 143/166 (86%), Gaps = 4/166 (2%)

Query: 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISV 457
           F+SP+ +LLLKSGRNGK NG+G Y YEKGSKPKPDPSVL I+E+ R+L+NIMPGGKPISV
Sbjct: 2   FRSPMTELLLKSGRNGKINGRGYYIYEKGSKPKPDPSVLSIVEKSRKLTNIMPGGKPISV 61

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
           T+KEIVEMILFPVVNE+CRVL+EG+V+RASDLD ASVLGMSFPSYRGGIVFWAD VG  Y
Sbjct: 62  TDKEIVEMILFPVVNEACRVLDEGVVIRASDLDIASVLGMSFPSYRGGIVFWADTVGPKY 121

Query: 518 VYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 563
           +Y  LKK S+ YG+FFKPSR+LEERA  G+ L    S S +SR++L
Sbjct: 122 IYERLKKLSETYGSFFKPSRYLEERAMNGMLL----SESKSSRSKL 163


>gi|432481707|ref|ZP_19723664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE210]
 gi|431007079|gb|ELD22048.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE210]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|269103138|ref|ZP_06155835.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163036|gb|EEZ41532.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 706

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 176/556 (31%), Positives = 284/556 (51%), Gaps = 35/556 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + +++  K+G++DAVV SE LL V++    +IA   KP  +S  +   +G   
Sbjct: 166 MILTGKQLRAKKAKKMGVVDAVVDSEILLTVAK----EIALEHKPKRQSSWQNWAMGGNP 221

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R V+  +  +   +KT  N P   A L+VI+ G+  G   G   EA+ F ELVM   S
Sbjct: 222 LGRSVVFDQAKKKTEQKTRGNYPATTAILEVIKHGLDKGLSQGYALEAQRFGELVMSSQS 281

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN---NIYVVL 175
           + L H+FFA  A  K     +   +   +  + V+GGGLMG+GI+  H+     ++ V +
Sbjct: 282 KALRHIFFATTAMKKEQGSLE---QAHPLTHIGVLGGGLMGAGIS--HVTATKADLPVRI 336

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V+++ +L  +            R  +++ +  N + M  G  D+  +  +DMV+EAV 
Sbjct: 337 KDVHNDGVLNALNYNYKLFSKKRDRKIISKAQLQNQMSMFTGGTDFIGYNQLDMVVEAVF 396

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK ++  ++E    P  I ATNTS++ ++ +       ++++G H+FSP   MPL+
Sbjct: 397 EDLALKHQMVRDIETHSKPDTIFATNTSSLPIHQIASAAQRPEQVVGLHYFSPVEKMPLV 456

Query: 296 EIVRTE------RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLV 348
           EI+  +       TS Q I   +T+ K   K P+VV +  GF VNR   PY +++ARLL+
Sbjct: 457 EIIPHQGTELGGATSQQTIETAITLAKKQGKTPIVVADTAGFYVNRILAPYMNEAARLLL 516

Query: 349 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLL 407
             G  +  ID ++  FG P+GP  LLD  G  + A  S        +R FQ+P L D LL
Sbjct: 517 E-GEPIEHIDRSLLDFGFPVGPITLLDEVGVDIGAKISPILLAELGER-FQAPDLFDTLL 574

Query: 408 KSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
             GR G+ +GKG Y Y  G K + D  V        +L N+ P      +  +++     
Sbjct: 575 NDGRKGRKSGKGFYLY-NGKKKEADKQVY-------QLLNLEP---EQHLAGQDLALRCT 623

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
             ++NE+ R L+EG++  A D D  ++ G+ FP + GG   + D++G + V      +S 
Sbjct: 624 LMMLNEAVRCLDEGVIQSARDGDIGAIFGIGFPPFLGGPFHYMDSLGLDRVLDMFIDYSH 683

Query: 528 LYGNFFKPSRFLEERA 543
            YG  F P   +  RA
Sbjct: 684 KYGERFAPCEGIVMRA 699


>gi|191173765|ref|ZP_03035287.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli F11]
 gi|300986886|ref|ZP_07177866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           200-1]
 gi|422373220|ref|ZP_16453542.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           60-1]
 gi|432471706|ref|ZP_19713751.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE206]
 gi|432714118|ref|ZP_19949157.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE8]
 gi|433078518|ref|ZP_20265054.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE131]
 gi|190905913|gb|EDV65530.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli F11]
 gi|300306341|gb|EFJ60861.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           200-1]
 gi|324015420|gb|EGB84639.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           60-1]
 gi|430997710|gb|ELD13966.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE206]
 gi|431256413|gb|ELF49486.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE8]
 gi|431596213|gb|ELI66174.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE131]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/550 (31%), Positives = 280/550 (50%), Gaps = 29/550 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKP-SRFLE 540
            F P +RF+E
Sbjct: 688 RFTPCNRFVE 697


>gi|417232239|ref|ZP_12033637.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           5.0959]
 gi|417608981|ref|ZP_12259484.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_DG131-3]
 gi|345358190|gb|EGW90378.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_DG131-3]
 gi|386205238|gb|EII09749.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           5.0959]
          Length = 714

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|383864612|ref|XP_003707772.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
            [Megachile rotundata]
          Length = 1200

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/476 (35%), Positives = 249/476 (52%), Gaps = 18/476 (3%)

Query: 74   KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133
            KKT    P     LDVI  G+  G  +G   EA+ F EL +   S+GL+ +FF Q    K
Sbjct: 729  KKTGGLYPAPLKILDVIRTGLDKGPAAGYEAEARAFGELAVTPQSKGLISLFFGQTICQK 788

Query: 134  VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 193
                   G     V+KVAV+G GLMG+GI    +     VV+K+ N   L +GI  I+  
Sbjct: 789  ----NRFGTPKSAVKKVAVVGAGLMGAGIIQVSVDKGFDVVMKDTNQVGLYRGINQIQKG 844

Query: 194  VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 253
            +   V R K +  + +  L  L   LDY+ FK+ D+VIEAV E + +K K+  E+E   P
Sbjct: 845  METAVKRKKYSGIQRDKYLARLDATLDYNSFKNADIVIEAVFEDIAIKHKVIKEIEANTP 904

Query: 254  PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 313
             HC++ATNTS I +N +   +S  D++IG H+FSP   M LLEI+  + TS + I   + 
Sbjct: 905  QHCVVATNTSAIPINKIAAGSSRPDKVIGMHYFSPVDKMQLLEIITHDGTSTETIKTAVD 964

Query: 314  VGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            VG    KV + VG+  GF   R      S+S RL+   GVD   +DS I+ FG P+GP  
Sbjct: 965  VGLKQGKVVITVGDGPGFYTTRILSAMLSESVRLMQE-GVDPTDLDSMIKKFGFPVGPAT 1023

Query: 373  LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKANGKGLYTYEKGSKP 429
            L D  G  V A  S    +A  +R F+   V +L   +K+G  G+ +GKG+Y YE  +K 
Sbjct: 1024 LSDEVGIDVGAHISAHLVQALGER-FKGGDVTILSDMVKAGFLGRKSGKGIYIYETHTKR 1082

Query: 430  KP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 488
            K  +   L I++       + P G   S+ ++++  +  F  VNE+   LEE I+    +
Sbjct: 1083 KNINLEALNILKG----HQLEPKGS-TSIEDRQLRMVSRF--VNEAVLCLEENILANPLE 1135

Query: 489  LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
             D  +V G+ FP + GG   W D  GA+ +   ++++   YG+ FKP + L + A+
Sbjct: 1136 GDIGAVFGLGFPPFTGGPFRWVDYYGASRLVKKMEEFQSHYGDAFKPCQMLYDMAS 1191


>gi|432617460|ref|ZP_19853573.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE75]
 gi|431153448|gb|ELE54352.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE75]
          Length = 714

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G   G   EA+ F ELVM   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSGGYDAEARAFGELVMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|167585331|ref|ZP_02377719.1| 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein [Burkholderia
           ubonensis Bu]
          Length = 416

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 144/403 (35%), Positives = 215/403 (53%), Gaps = 5/403 (1%)

Query: 145 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 204
           R V ++ V+GGG MG+GIA A +   + V + E +   L +G   +E    GLV +G++T
Sbjct: 8   RPVERIGVVGGGTMGAGIAVAALDAGLPVTMIERDDASLARGRAHVEKVYDGLVAKGRMT 67

Query: 205 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264
                  +   KG   Y      D+VIEAV E + +KQ +F+EL +AC P  +LATNTS 
Sbjct: 68  PAAHAARMARFKGSTSYDALAQADVVIEAVFEDIAVKQAVFAELARACKPGAVLATNTSY 127

Query: 265 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 324
           +D++ +         +IG HFFSPA+VM LLEIV   R S  V+     + K +KK PV 
Sbjct: 128 LDIDRIAASIDRPSDVIGLHFFSPANVMKLLEIVVPARVSPDVVATAFELAKKLKKTPVR 187

Query: 325 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 384
            G C GF  NR    Y  +A  L+  G   ++ID+A+R+FG P+GPFQ++DLAG  +  A
Sbjct: 188 AGVCDGFIGNRILAVYRTAADYLMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWA 247

Query: 385 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKP-KPDPSVLPIIEECR 443
           T K        R+    + D L + G  G+  G+G Y Y  G++   PDP V  I+ + R
Sbjct: 248 TRKRRAATRDPRARYVGISDRLCERGWFGQKTGRGYYLYPDGARTGTPDPEVAAIVADER 307

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
               +     P + T+ EI+   L  ++NE   V+ E I +R  D+D   + G  FP +R
Sbjct: 308 ASKGVT----PRAFTDDEILRRYLAAMINEGANVVHEKIALRPLDVDAVFLHGYGFPRHR 363

Query: 504 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           GG + +AD VG   V   ++ +++    F+KPS  + E   +G
Sbjct: 364 GGPMHYADTVGLANVLADIRAFAKEDPLFWKPSPLIVELVARG 406


>gi|432802558|ref|ZP_20036537.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE84]
 gi|431348347|gb|ELG35205.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE84]
          Length = 714

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG K K   DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGCKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|209919841|ref|YP_002293925.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli SE11]
 gi|419370841|ref|ZP_13911960.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14A]
 gi|422355201|ref|ZP_16435920.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           117-3]
 gi|254788654|sp|B6I6Q4.1|FADJ_ECOSE RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|209913100|dbj|BAG78174.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|324016851|gb|EGB86070.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           117-3]
 gi|378217435|gb|EHX77714.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14A]
          Length = 714

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|73538624|ref|YP_298991.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
 gi|72121961|gb|AAZ64147.1| 3-hydroxyacyl-CoA dehydrogenase [Ralstonia eutropha JMP134]
          Length = 446

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/427 (36%), Positives = 232/427 (54%), Gaps = 10/427 (2%)

Query: 123 HVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           +V FAQ   + +P+   D+ L+P  V  VAVIG G MG GIA A     I V L + + +
Sbjct: 16  YVRFAQAEAAHIPDFPKDLPLRP--VNHVAVIGAGTMGGGIAMALANIGIPVTLIDSSEK 73

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            L  G++ +  N  G V+RGKL        L ++KG    ++    DMVIEAV E + LK
Sbjct: 74  GLETGLRRVRDNYAGSVSRGKLEPAAMETRLSLIKGSGALADAASADMVIEAVFEDMALK 133

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
           Q++F +L+  C P  ILATNTS +D++ +   T     ++GAHFFSPAHVM LLE+VR  
Sbjct: 134 QQVFRDLDARCKPGAILATNTSGLDVDAIAAVTKRPQDVVGAHFFSPAHVMRLLEVVRAR 193

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
            T+  VI  LM +G+ + K  V+     GF  N  F  Y++ A  LV  G     +D A+
Sbjct: 194 DTAPDVIATLMDLGRRMGKTAVLARVYPGFIGNALFRNYTREAHFLVEEGALPHEVDQAL 253

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLY 421
             FG  +G F + D+AG  V   T K      P     + L+  L + GR G+ +GKG Y
Sbjct: 254 TDFGYAMGIFAVHDMAGNDVGYQTRKAQIATRPQDRRWNDLILKLTELGRLGQKSGKGWY 313

Query: 422 TYEKGSK-PKPDPSVLPIIE-ECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
            YE GS+ P  DP V   IE E  RL  +    +PI    +EI++  ++ +VNE  ++LE
Sbjct: 314 RYEPGSRQPLRDPEVETFIEQESARLGMVR---RPIDA--EEIIKRCVYGMVNEGAKLLE 368

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
            G+ +R SD+D   + G  FP+  GG +++AD +G   VY  ++++   +G +++P+  L
Sbjct: 369 AGVALRPSDIDTVYLTGYGFPARHGGPMYYADRIGLREVYADIERFHAEHGYWWEPAPLL 428

Query: 540 EERATKG 546
              A  G
Sbjct: 429 VRLARDG 435


>gi|82544822|ref|YP_408769.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella boydii Sb227]
 gi|417682956|ref|ZP_12332309.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           3594-74]
 gi|420353732|ref|ZP_14854839.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           4444-74]
 gi|123728354|sp|Q31YB7.1|FADJ_SHIBS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|81246233|gb|ABB66941.1| putative enzyme [Shigella boydii Sb227]
 gi|332093640|gb|EGI98698.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           3594-74]
 gi|391277867|gb|EIQ36592.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           4444-74]
          Length = 714

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVSERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|432441834|ref|ZP_19684174.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE189]
 gi|432446950|ref|ZP_19689249.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE191]
 gi|433014604|ref|ZP_20202951.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE104]
 gi|433024223|ref|ZP_20212210.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE106]
 gi|433323812|ref|ZP_20401143.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli J96]
 gi|430966288|gb|ELC83696.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE189]
 gi|430973223|gb|ELC90191.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE191]
 gi|431530335|gb|ELI07016.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE104]
 gi|431535295|gb|ELI11676.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE106]
 gi|432347910|gb|ELL42367.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli J96]
          Length = 714

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K+P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|409431188|ref|ZP_11262572.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas sp. HYS]
          Length = 715

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 280/558 (50%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVVT E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVTPELLQAAALDLIKRAISGELDHKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D     R V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 NESAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ N
Sbjct: 526 KIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVADAAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         K++ L
Sbjct: 634 PLCLETVRCLEDGIVDTAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADKYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|331647998|ref|ZP_08349090.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M605]
 gi|331043722|gb|EGI15860.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M605]
          Length = 720

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKFSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLAMQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|283832235|ref|ZP_06351976.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
           ATCC 29220]
 gi|291071876|gb|EFE09985.1| fatty oxidation complex, alpha subunit FadJ [Citrobacter youngae
           ATCC 29220]
          Length = 714

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 279/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  K GL+D VV    LL+     A+++A +     R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKAGLVDEVVPQSILLEA----AVELAKKDSSTHRTLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A      ++  A+KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H+FFA     K P  +D+   P     +   G    G    TA     + V +K++
Sbjct: 283 QALRHIFFANTDVKKDPG-SDVQPGPLNRVGILGGGLMGGGIAYVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSTDYRGFAHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH I A+NTS++ +  +    +  ++++G HFFSP   MPL+E++
Sbjct: 401 ALKQQMVAEVEQHCAPHTIFASNTSSLPIGDIAANAARPEQVVGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS Q I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAATSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y  KG K K   DP++  +I        +   G+   +T  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGAKGRKSKKQVDPAIYTLI-------GVQGQGR---LTAVQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E +V  A D D  +V G+ FP + GG   + D++GA  V  +L++ +  YG+ F
Sbjct: 630 AARCFDEKVVRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLTAQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L + A +G
Sbjct: 690 TPCEQLLQMAERG 702


>gi|158257028|dbj|BAF84487.1| unnamed protein product [Homo sapiens]
          Length = 723

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 177/569 (31%), Positives = 286/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 156 RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 213 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FF +R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFFTERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 326 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 444 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   +   R+  +I    +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTHHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|432875981|ref|ZP_20094141.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE154]
 gi|431420253|gb|ELH02585.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE154]
          Length = 714

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVTEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|419914600|ref|ZP_14432993.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli KD1]
 gi|388386129|gb|EIL47786.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli KD1]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 172/554 (31%), Positives = 280/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFPVVN 472
           G+G Y Y +KG  SK + DP++ P+I           G + +  ++  ++ E  +  ++N
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-----------GAQGLGRLSAPQVAERCVMLMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ 
Sbjct: 629 EAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L E + +G
Sbjct: 689 FTPCDRLVEMSERG 702


>gi|325277301|ref|ZP_08142928.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas sp. TJI-51]
 gi|324097567|gb|EGB95786.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas sp. TJI-51]
          Length = 715

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +EE  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEEALKVGAVDAVVAPELLQAGAIDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++IV  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIVNWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADRYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|194436233|ref|ZP_03068335.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           101-1]
 gi|251785701|ref|YP_003000005.1| FadJ monomer, subunit of 3-hydroxyacyl-CoA dehydrogenase
           [multifunctional] and fatty acid oxidation complex
           [Escherichia coli BL21(DE3)]
 gi|253772736|ref|YP_003035567.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162349|ref|YP_003045457.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli B str. REL606]
 gi|254289110|ref|YP_003054858.1| multifunctional enoyl-CoA
           hydratase/epimerase/isomerase/3-hydroxyacyl-CoA
           dehydrogenase [Escherichia coli BL21(DE3)]
 gi|297517922|ref|ZP_06936308.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli OP50]
 gi|422786961|ref|ZP_16839700.1| fatty oxidation complex [Escherichia coli H489]
 gi|422792597|ref|ZP_16845297.1| fatty oxidation complex [Escherichia coli TA007]
 gi|442599062|ref|ZP_21016795.1| Enoyl-CoA hydratase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
 gi|194424961|gb|EDX40946.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           101-1]
 gi|242377974|emb|CAQ32743.1| FadJ monomer, subunit of 3-hydroxyacyl-CoA dehydrogenase
           [multifunctional] and fatty acid oxidation complex
           [Escherichia coli BL21(DE3)]
 gi|253323780|gb|ACT28382.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974250|gb|ACT39921.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli B str. REL606]
 gi|253978417|gb|ACT44087.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli BL21(DE3)]
 gi|323961413|gb|EGB57024.1| fatty oxidation complex [Escherichia coli H489]
 gi|323970943|gb|EGB66194.1| fatty oxidation complex [Escherichia coli TA007]
 gi|441652160|emb|CCQ02292.1| Enoyl-CoA hydratase [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GAHGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|374288523|ref|YP_005035608.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
           SJ]
 gi|301167064|emb|CBW26643.1| fatty acid oxidation complex subunit alpha [Bacteriovorax marinus
           SJ]
          Length = 706

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 170/555 (30%), Positives = 282/555 (50%), Gaps = 36/555 (6%)

Query: 15  KLGLIDA--VVTSEELLKVSRLWALDIAARRKPWIR-----SLH--RTDKLGSLSEAREV 65
           K+GL  A  V+ + ++LK  +   L + A   P  R     S H    +K G L E+ E 
Sbjct: 157 KIGLPKALDVILTGKMLKAKKAKRLGLVAGVYPKERIKKMASFHFGGDEKKGGLKESLEH 216

Query: 66  LKLARLQAKKTAPNMPQ----------HQA---CLDVIEEGIVHGGYSGVLKEAKVFKEL 112
           +      AKK      +          +QA    LDV+E GI+ G  S +  E++ F EL
Sbjct: 217 IASDNFFAKKIIFQKARESVLKKTKGFYQAPLKILDVMEAGIMKGRSSYLAAESQAFGEL 276

Query: 113 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY 172
            + + S+ L H+FF      K       G  PR ++K A +G G MG GIA     N + 
Sbjct: 277 CVSEQSKNLQHIFFMTETAKKYSGPESSGNLPR-LKKGAALGAGTMGGGIAWLMANNGMA 335

Query: 173 VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
            ++K++  E L  G K   +N  G V R ++T+D+     + ++G + Y  F+ VD+VIE
Sbjct: 336 PLMKDLTPEALELGYKQSSSNFMGAVKRKRMTRDEFERKQRSIQGQVGYDGFERVDLVIE 395

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           A++E++ +K+ +FSE+E      C++ +NTS++ +  +     + +R  G HFF+P H+M
Sbjct: 396 AIVENMNIKKSVFSEVETKVRKDCVITSNTSSLSVQEMSTALENPERFAGLHFFNPVHMM 455

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
           PL+EI+  ++ + + +  L      +KK PV+V +  GF VNR   P+   A  L+  GV
Sbjct: 456 PLVEIITHDKVAPETLEALYNWCMKVKKTPVIVKDGPGFLVNRILMPFMNEAGFLLEEGV 515

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
            +  ID A  +FG+P+GP +LLD  G  V    +K       DR   SP    L++    
Sbjct: 516 PMKDIDDACLNFGMPMGPCRLLDEVGIDVGEKVAKIIHDGLGDRVKSSPFSSKLVEKNFL 575

Query: 413 GKANGKGLYTYEK-GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           GK NGKG Y Y+K G    P+  V  ++ + ++            + E EI   I  P++
Sbjct: 576 GKKNGKGFYIYDKRGKVEGPNEEVQAMLPKTKK-----------KMDETEIQMRIFLPMI 624

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ-LYG 530
           NE+  VL +GIV  A+ +D   + G+ FP +RGG++ +AD+ G   +  +++  ++ +  
Sbjct: 625 NEAATVLADGIVESAAQVDLGLIFGIGFPPFRGGLLRYADSEGLERLIKAMEDRAESVDK 684

Query: 531 NFFKPSRFLEERATK 545
           + + P  FL++ A +
Sbjct: 685 DRYTPCDFLKDLAAQ 699


>gi|432392856|ref|ZP_19635686.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE21]
 gi|430918012|gb|ELC39051.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE21]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQGRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QTLRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|422370074|ref|ZP_16450468.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           16-3]
 gi|432899357|ref|ZP_20110049.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE192]
 gi|433029314|ref|ZP_20217173.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE109]
 gi|315298179|gb|EFU57443.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           16-3]
 gi|431427009|gb|ELH09053.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE192]
 gi|431543054|gb|ELI18050.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE109]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAAKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSAGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|397470061|ref|XP_003806653.1| PREDICTED: peroxisomal bifunctional enzyme [Pan paniscus]
          Length = 723

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 178/569 (31%), Positives = 286/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 156 RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPYMDSI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 213 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L H FFA+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQHAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 326 VDSDKNQLAIANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 444 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETHHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+  +L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFCILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|406834259|ref|ZP_11093853.1| multifunctional fatty acid oxidation complex subunit alpha
           [Schlesneria paludicola DSM 18645]
          Length = 719

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/446 (34%), Positives = 238/446 (53%), Gaps = 14/446 (3%)

Query: 104 KEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA 163
           +EA+   EL     SR L++VFF      K   + +  +KP  ++ V VIG G+MGSGIA
Sbjct: 274 REAEAVAELFGSPVSRALINVFFLTDHNKKDLGIDNRSVKPSPLQSVGVIGAGIMGSGIA 333

Query: 164 TAHILNNIYVVLKEVNSEYLLKGIK-TIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222
            A +   + V L +   E L  G++  IE       T+G  T ++  N    +  V+D S
Sbjct: 334 AACLKRGLSVSLTDARPESLTAGVRLAIEEASFDKATKGP-TAERILNLAPHMHEVVDDS 392

Query: 223 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIG 282
           +F   D+VIEA++E+  +K+++ + +E   P    LA+NTS I +  + E     +R  G
Sbjct: 393 DFSRCDLVIEAIVENESVKRELHTRIEALLPETAFLASNTSAISIGRLAEHLKRPERFCG 452

Query: 283 AHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQ 342
            HFF+P   MPL+E++R  +TS + +   +   K + K P+VV +  GF VNR  FPY  
Sbjct: 453 IHFFNPVRKMPLVEVIRGPKTSDETVATAVAFAKGLGKNPIVVADGPGFLVNRLLFPYMN 512

Query: 343 SARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPL 402
               L++ GV +  ID A R+FG+P+GP  L D+ G   A    +   +AFPDR   SPL
Sbjct: 513 ETYNLLTSGVPIKAIDGAARAFGMPMGPVTLSDVVGLDTALFAGRVMAEAFPDRFLSSPL 572

Query: 403 VDLLLKSGRNGKANGKGLYTYE-KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           ++ L+K+GR G+ +G G + Y+ K  + +PDP+   I           P      V + +
Sbjct: 573 LESLVKAGRLGQKSGAGFFAYKNKSDRGEPDPAFDAI---------HAPFVTAAPVPDAQ 623

Query: 462 IVEMILF-PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
            + + LF P+V E+ RVL+E  V    D+D   + G+ FP ++GG++FWAD +GA  +  
Sbjct: 624 TLTLRLFLPMVLEATRVLQEQKVRDPRDVDLGLIFGIGFPPFKGGLLFWADTIGATKIVE 683

Query: 521 SLKKWSQLYGNFFKPSRFLEERATKG 546
            LK +  L G  F P+  L E A  G
Sbjct: 684 LLKPFEAL-GERFHPTPLLLELAASG 708


>gi|425092648|ref|ZP_18495733.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW5]
 gi|405611874|gb|EKB84640.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW5]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 180/555 (32%), Positives = 282/555 (50%), Gaps = 25/555 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLWPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P   + G  P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKGI 547
           F P   L   A +GI
Sbjct: 690 FTPCDTLLRMAEQGI 704


>gi|442322874|ref|YP_007362895.1| multifunctional fatty acid oxidation complex subunit alpha
           [Myxococcus stipitatus DSM 14675]
 gi|441490516|gb|AGC47211.1| multifunctional fatty acid oxidation complex subunit alpha
           [Myxococcus stipitatus DSM 14675]
          Length = 742

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 278/582 (47%), Gaps = 54/582 (9%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA-------------------- 40
           ++L  KS+   +  KLG++D VV +  L  V+   A ++A                    
Sbjct: 173 LILTGKSVKPSKARKLGIVDEVVPTPILRAVALQRARELAEGSLKPERTRGQGLTAGGPK 232

Query: 41  ---------ARRKPWIRSLHRTDKLGS---LSEAREVLKLARLQAKKTAPNMPQHQACLD 88
                    A ++ W       + LG      +AR  L       KKT    P  +  L 
Sbjct: 233 GLAGFFQGLANKELWAEVALEDNPLGRKLLFDQARNQL------LKKTRGKYPAPEKALQ 286

Query: 89  VIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVR 148
           VI  G+  G  +G+  EA+ F ELVM D S+ LV +FFA  A  K     D  +KPR V+
Sbjct: 287 VIRVGLESGRKAGLEAEARAFGELVMSDVSKRLVEIFFATTALKKENGTADASVKPREVK 346

Query: 149 KVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK 207
           KV V+GGGLMG GIA  A +L    V +K+ +     + +K ++  +   V R  LT  +
Sbjct: 347 KVGVLGGGLMGGGIAYVAGVLQGAQVRVKDKDDAGAGRALKQVQGILEERVKRRSLTWRE 406

Query: 208 ANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 267
           A      +    DYS FK  D+VIEAV E + LK +I +E+E    P  I A+NTS+I +
Sbjct: 407 AAAKQAHITAGTDYSGFKSADLVIEAVFEDLKLKHRILAEVEAVTRPDAIFASNTSSIPI 466

Query: 268 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 327
             + + +    ++IG H+FSP + MPLLE++    T+  V    + VG+   K  +VV +
Sbjct: 467 TELAKGSQRPAQVIGMHYFSPVNKMPLLEVITHAGTADWVTATCVDVGRRQGKTVIVVND 526

Query: 328 CTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK 387
             GF  +R   PY   A  L+  G D+  +D A+  FG P+GP  LLD  G  VA     
Sbjct: 527 GPGFYTSRILAPYLNEAAYLLGEGADIAALDKALVEFGFPVGPMTLLDEVGIDVAHKVGP 586

Query: 388 EFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSV---LPIIEECRR 444
             + AF  R      +D ++  GR G+ + KG Y YE G K + DPSV   LP  +E +R
Sbjct: 587 LMEAAFGKRMAAPKALDAVVAEGRLGRKSQKGFYLYENGKKREVDPSVYVLLPHGKERKR 646

Query: 445 LSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRG 504
                           E+ E ++  +VNE+ R L EGI+  A D D  ++ G+ FP + G
Sbjct: 647 FDA------------AEMAERLVLQMVNEAIRCLGEGILRSARDGDVGAIFGLGFPPFLG 694

Query: 505 GIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           G   +AD+VGA  +   L+ +    G  F P+  LEE    G
Sbjct: 695 GPFHYADSVGAAELLRKLEHYQDKLGERFTPAPLLEEHVKAG 736


>gi|237732366|ref|ZP_04562847.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter sp. 30_2]
 gi|226907905|gb|EEH93823.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter sp. 30_2]
          Length = 715

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 174/552 (31%), Positives = 278/552 (50%), Gaps = 24/552 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  K+GL+D VV    LL+     A+++A +     R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEA----AVELAKKDSSAHRTLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A      ++  A+KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H+FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRHIFFANTDVKKDPG-SDAKPGPLNSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G +DY  F   D++IEAV E +
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 SLKQRMVAEVEQNCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS Q I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y  KG K K   DP++  +I        +   G+   +T  +I E  +  ++NE
Sbjct: 580 GRGFYLYGAKGRKSKKQVDPAIYTLI-------GVQGQGR---LTAAQIAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E IV  A D D  +V G+ FP + GG   + D++GA  V   L++ +  YG+ F
Sbjct: 630 AARCFDERIVRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVAVLQRLTTQYGSRF 689

Query: 534 KPSRFLEERATK 545
            P   L + A +
Sbjct: 690 TPCEQLLQMAER 701


>gi|417192133|ref|ZP_12014233.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           4.0522]
 gi|386191015|gb|EIH79761.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           4.0522]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   ++  +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQPLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|345300205|ref|YP_004829563.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
           LF7a]
 gi|345094142|gb|AEN65778.1| Fatty acid oxidation complex subunit alpha [Enterobacter asburiae
           LF7a]
          Length = 715

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 187/552 (33%), Positives = 281/552 (50%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + + +  K GL+D VV    LL+ +   AL    + KP +    R    G L 
Sbjct: 167 MILTGKQLRARQALKTGLVDEVVPYSILLEAAVERALK-GRQAKPHLPVRERI-LAGPLG 224

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            A     + +  A+KT  N P     L+VIE G+ HG  SG   EAK F EL M   S+ 
Sbjct: 225 RALLFSMVGKKTAQKTKGNYPATTRILEVIETGLAHGSSSGYAAEAKAFGELAMTPQSQA 284

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVN 179
           L  +FFA     K P  +D   +P  +R V V+GGGLMG GIA        + V +K++N
Sbjct: 285 LRSIFFASTDVKKDPG-SDA--EPASLRAVGVLGGGLMGGGIAFVTASKGKLPVRIKDIN 341

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
            + +   ++     +   V R  +   + +  L ++ G  DYS F   D+VIEAV E + 
Sbjct: 342 PKGINHALQYSWQQLDQKVKRRHIKASERDKVLALISGTTDYSGFAHRDLVIEAVFEDLA 401

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           LKQK+ +++E+ C PH I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++ 
Sbjct: 402 LKQKMVADVEQYCAPHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEVIP 461

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
              TS Q I  ++ + K+  K PVVV +  GF VNR   PY   A  L++ G  +  +D 
Sbjct: 462 HATTSPQTIATVVKLAKMQGKTPVVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHVDE 521

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANG 417
           ++  FG P+GP QLLD  G           + A+ DR F  P  +V ++LK  R G+ N 
Sbjct: 522 SLVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGDR-FSPPANIVSVILKDDRKGRKNE 580

Query: 418 KGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
           +G Y Y +KG  SK + DPSV  +I    +       GK  +V   E   M++   +NE+
Sbjct: 581 RGFYLYAQKGRKSKKQVDPSVYGLISATGQ-------GKLSAVQCAERCVMMM---LNEA 630

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R   E ++  A D D  +V G+ FP + GG   + D +GA  V  +L++ +  YG  F 
Sbjct: 631 ARCFGEQVIKSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGEVVATLQRLATQYGPRFT 690

Query: 535 PSRFLEERATKG 546
           P   L + A +G
Sbjct: 691 PCDELLQMAERG 702


>gi|194432919|ref|ZP_03065203.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           1012]
 gi|417673098|ref|ZP_12322554.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           155-74]
 gi|420348240|ref|ZP_14849629.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           965-58]
 gi|194418907|gb|EDX34992.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           1012]
 gi|332090133|gb|EGI95232.1| fatty oxidation complex, alpha subunit FadJ [Shigella dysenteriae
           155-74]
 gi|391269243|gb|EIQ28155.1| fatty oxidation complex, alpha subunit FadJ [Shigella boydii
           965-58]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQTLKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|56478637|ref|YP_160226.1| 3-hydroxyacyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
 gi|56314680|emb|CAI09325.1| 3-hydroxyacyl-CoA dehydrogenase [Aromatoleum aromaticum EbN1]
          Length = 443

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 156/431 (36%), Positives = 238/431 (55%), Gaps = 8/431 (1%)

Query: 118 SRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLK 176
            + L +V  A+R  +++P++  D  L+P  +R+V VIG G MG GIA +     I V + 
Sbjct: 13  EQALAYVDGARRDAARIPDIPADTPLRP--IRRVGVIGAGTMGGGIAMSFANVGIPVTVC 70

Query: 177 EVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIE 236
           + +   L +G++ +  N    V RG+L        L +++  +D  + KD D+VIEAV E
Sbjct: 71  DTDGAALERGLERVRRNYEFSVARGRLDAATMAARLALIRAAVDLQDLKDADLVIEAVFE 130

Query: 237 SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE 296
            + LKQ IF +L+    P  ILATNTS +D++ +   T     ++GAHFFSPAHV  LLE
Sbjct: 131 DMALKQDIFRKLDAIVHPDAILATNTSGLDIDEIAVVTRRPQDVVGAHFFSPAHVQKLLE 190

Query: 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFR 356
           +VR  RT+ +VI  LM++G+ + KV V+     GF  N  F  Y + A  LV  G     
Sbjct: 191 VVRGARTAPEVIATLMSLGRRMGKVSVLSRIYPGFIGNALFRQYVREAHFLVEEGALPHE 250

Query: 357 IDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKAN 416
           +DSA+  FG  +G F + D+AG  V     K      P     + L+  L   GR G+ +
Sbjct: 251 VDSALGRFGYAMGVFAVHDMAGNDVGWQMRKAQMATRPRDRRWNDLILELCDMGRLGQKS 310

Query: 417 GKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           GKG Y YE G + P+ DP +   I E  R +++    +PI   E EI++  L+ ++NE  
Sbjct: 311 GKGWYRYENGDRTPRRDPEIERYIVE--RSAHLGIERRPIG--EDEIIKRCLYGMINEGA 366

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           ++LE+GI +RASD+D   V G  FP+ RGG +++AD VG   ++  +K++   +G ++ P
Sbjct: 367 KLLEQGIALRASDIDIVFVTGYGFPAERGGPMYYADQVGLAGIFADVKQFHTRHGAWWTP 426

Query: 536 SRFLEERATKG 546
           S  LE  A  G
Sbjct: 427 SPLLERLAASG 437


>gi|432358683|ref|ZP_19601908.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE4]
 gi|430876925|gb|ELC00391.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE4]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGVAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALHNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|420337039|ref|ZP_14838608.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-315]
 gi|391260778|gb|EIQ19832.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-315]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVELI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|398952502|ref|ZP_10674814.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM33]
 gi|398155037|gb|EJM43494.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM33]
          Length = 715

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ LV 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLVG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVEKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|432851859|ref|ZP_20082015.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE144]
 gi|431399648|gb|ELG83047.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE144]
          Length = 714

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R      + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHFKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVTEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|431801612|ref|YP_007228515.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida HB3267]
 gi|430792377|gb|AGA72572.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida HB3267]
          Length = 715

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEAQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVADATVLDVLKPIVYEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|378827047|ref|YP_005189779.1| protein PimF [Sinorhizobium fredii HH103]
 gi|365180099|emb|CCE96954.1| pimF [Sinorhizobium fredii HH103]
          Length = 686

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/419 (36%), Positives = 230/419 (54%), Gaps = 11/419 (2%)

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E + F  L     +  L HVFFA+RA ++ P +   G+ PR +R  AVIGGG MG+GIA 
Sbjct: 248 ERETFLALRGSAQAAALRHVFFAERAATRPPELA--GITPRTIRSAAVIGGGTMGAGIAA 305

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
           A     + VVL E +   + +G+  + A   G   RG+++ + A   +  + G  DY+  
Sbjct: 306 ALSDAGLPVVLVERDDGAVERGLANLRAIFDGAAKRGRISIEVAAERMAGVIGTTDYAAL 365

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
            D+D+VIEAV E + +K+ +F  L  AC    +LATNTS +D   + E  S  DR +G H
Sbjct: 366 ADIDLVIEAVFEDLDVKRDVFRRLAAACRDDAVLATNTSYLDPERIAEGISRPDRFLGLH 425

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF-FPYSQS 343
           FFSPA VM LLEIV ++ T+ +V+     + +++ K+PV  G C GF  NR      +Q+
Sbjct: 426 FFSPAQVMKLLEIVPSKATAPEVVAASFGLARMLNKIPVRAGICDGFIGNRILKVTRAQA 485

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
            RLL++ G     +D+A+R+FGLP+GPF+  DL G  +AA   K   +A  +  F +P+ 
Sbjct: 486 ERLLLA-GATPAAVDAAMRAFGLPMGPFEAQDLGGLDIAAFQRKAA-RARGETPF-APVA 542

Query: 404 DLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIV 463
           D L  + R G+ +G G Y YE G +  P PS            N       +   +  I 
Sbjct: 543 DRLSAAQRFGQKSGGGWYDYEPGDR-TPRPSDAVAAIIAEEAKNW----PRLEWHQDAIA 597

Query: 464 EMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           + IL+P+VNE  R+L +G  +RASD+D   + G  FP +RGG + +A A G + V  +L
Sbjct: 598 DCILWPMVNEGARILADGTALRASDIDLVKIHGYGFPRWRGGPMHYAQAHGLDKVVDAL 656


>gi|83943661|ref|ZP_00956119.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Sulfitobacter sp. EE-36]
 gi|83845341|gb|EAP83220.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Sulfitobacter sp. EE-36]
          Length = 698

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 163/453 (35%), Positives = 246/453 (54%), Gaps = 18/453 (3%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+L E K+F EL+  D  +G++H FF++RA   +P +   G++PR ++ + +IGGG MG+
Sbjct: 245 GMLAERKIFMELMETDQRQGMIHAFFSERAVGNLPELK--GVEPRALQSIGIIGGGTMGA 302

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK----ANNALKMLK 216
           GIATA +L    VVL E+  +        I  N+ G + RGK+TQ K     N AL++  
Sbjct: 303 GIATAALLAGFNVVLIEMKEDAAEAARGRIAGNLSGALKRGKITQMKYDAMTNTALEV-- 360

Query: 217 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 276
             ++Y     VD+VIEAV E + +K+++F +L+  C P  ILA+NTS +D++ +   TS 
Sbjct: 361 -SINYDSLASVDLVIEAVFEDMGVKKEVFGKLDAVCKPGAILASNTSYLDVDEIAASTSR 419

Query: 277 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 336
              +IG HFFSPAH+M LLE+V  E+T+  V+     +GK + K+ V  G C GF  NR 
Sbjct: 420 PADVIGLHFFSPAHIMKLLEVVVAEKTAPDVVATGFALGKALNKISVRAGVCDGFIGNRI 479

Query: 337 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR 396
              Y  +A  +V  G   F+ID A+  FG  +GPF + DLAG  +  AT K         
Sbjct: 480 LATYRTAADHMVLDGASPFQIDKALVDFGFAMGPFAVGDLAGLDIGWATRKRKAATRHPA 539

Query: 397 SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK---PKPDPSVLPIIEECRRLSNIMPGGK 453
                  D + ++G  G+  GKG Y YE GS+   P P+ S L   E   R      G  
Sbjct: 540 ERVPTYPDKICEAGNFGQKTGKGYYIYEAGSRGGVPNPEVSELIAAERAER------GIT 593

Query: 454 PISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAV 513
           P   T+ EIV   +  +VNE+ +V+ EGI  R  D+D   + G  FP Y GG + WAD  
Sbjct: 594 PRDFTDAEIVRRYMAAMVNEAAKVVGEGIAKRPLDVDMVLLFGYGFPRYWGGPMKWADLQ 653

Query: 514 GANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           G   +   ++ +++    F++P+  L++   +G
Sbjct: 654 GLPALLADIESYAKEDAWFWEPAPLLKQLVAEG 686


>gi|432948212|ref|ZP_20143368.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE196]
 gi|433043916|ref|ZP_20231411.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE117]
 gi|431458190|gb|ELH38527.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE196]
 gi|431555754|gb|ELI29593.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE117]
          Length = 714

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P     L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPSTDRILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPTPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|347821277|ref|ZP_08874711.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Verminephrobacter
           aporrectodeae subsp. tuberculatae At4]
          Length = 412

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 146/406 (35%), Positives = 228/406 (56%), Gaps = 9/406 (2%)

Query: 145 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 204
           R +R VAVIG G MG GIA   +   I V + E   E L +G+ T+  N    V +GKLT
Sbjct: 8   REIRAVAVIGAGTMGGGIAMNFLNAGIPVKILETRQEALDRGMATMRKNYESQVKKGKLT 67

Query: 205 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264
           Q++    + +L   LDY++ KD D+ IEAV E + +K+ +F +L+    P  ILA+NTST
Sbjct: 68  QEQYTQRMALLSPTLDYADLKDADLFIEAVFEEMGVKEAVFRQLDAVAKPGAILASNTST 127

Query: 265 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 324
           +D++ +   T     ++G HFFSPA+VM LLE+VR ++T+  V+  +M +GK IKK  V+
Sbjct: 128 LDVDRIAACTRRPQDVLGMHFFSPANVMKLLEVVRGKQTAKDVLATVMALGKRIKKTCVL 187

Query: 325 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 384
            G C GF  NR    Y + A  L+  G    ++D A+ SFG  +GPF++ DLAG  +  A
Sbjct: 188 SGVCDGFIGNRMLEQYVRQAGFLLDEGCTPQQVDQAMESFGFAMGPFRVSDLAGNDIGWA 247

Query: 385 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECR 443
             K       +  + S   D L + GR G+  G G Y Y+ G +   P   V  +IE+ R
Sbjct: 248 IRKRRAVERAEMKY-SRTADKLCELGRFGQKTGAGWYDYQAGKRDAIPSALVETLIEDQR 306

Query: 444 RLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 503
           +   I P      + E+EIV+ ++F ++NE   +LE+GI  ++SD+D   + G  FP +R
Sbjct: 307 KELGITPR----KIAEEEIVQRLVFALINEGAHILEDGIASKSSDIDMVYITGYGFPLHR 362

Query: 504 GGIVFWADAVGANYVYTSLKKWSQL---YGNFFKPSRFLEERATKG 546
           GG + +A  +G   V  +++++++       F+KP+  L + A +G
Sbjct: 363 GGPMHYAGELGLFNVVLAMERFAKNPLDDAAFWKPAPLLAKLAAQG 408


>gi|432863027|ref|ZP_20087273.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE146]
 gi|431404562|gb|ELG87811.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE146]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 177/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +   R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRASSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVIENGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+EK C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EIV
Sbjct: 401 ELKQQMVAEVEKNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIV 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|421845948|ref|ZP_16279099.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter freundii ATCC 8090 = MTCC 1658]
 gi|411772717|gb|EKS56312.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter freundii ATCC 8090 = MTCC 1658]
          Length = 715

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 177/551 (32%), Positives = 285/551 (51%), Gaps = 26/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  K+GL+D VV    LL+     A+++A +     R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A      ++  A+KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L H+FFA     K P       KP  +  V V+GGGLMG GIA        + V +K+
Sbjct: 283 QALRHIFFANTDVKKDPGSD---AKPGPLNSVGVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N++ +   +K     +   V R  +   + +  L ++ G +DY  F   D++IEAV E 
Sbjct: 340 INAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +E+E+ C PH + A+NTS++ +  +    +  +++IG HFFSP   MPL+E+
Sbjct: 400 LSLKQRMVAEVEQNCAPHTVFASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS Q I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  I
Sbjct: 460 IPHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ 
Sbjct: 520 DAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRK 578

Query: 416 NGKGLYTY---EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + SK + DP++  +I        +   G+   +T  ++ E  +  ++N
Sbjct: 579 NGRGFYLYGVKGRKSKKQVDPAIYTLI-------GVQGQGR---LTAAQVAERCVMLMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E IV  A D D  +V G+ FP + GG   + D++GA  V  +L++ +  YG+ 
Sbjct: 629 EAARCFDEKIVRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLTTQYGSR 688

Query: 533 FKPSRFLEERA 543
           F P   L + A
Sbjct: 689 FAPCEQLLQMA 699


>gi|432675446|ref|ZP_19910905.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE142]
 gi|431213981|gb|ELF11836.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE142]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTKHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|218559253|ref|YP_002392166.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli S88]
 gi|432363417|ref|ZP_19606583.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE5]
 gi|254788662|sp|B7MGV7.1|FADJ_ECO45 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|218366022|emb|CAR03766.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli S88]
 gi|430886149|gb|ELC09010.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE5]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG K K   DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGCKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|215487553|ref|YP_002329984.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O127:H6 str. E2348/69]
 gi|312967642|ref|ZP_07781857.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2362-75]
 gi|417756602|ref|ZP_12404677.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2B]
 gi|418997531|ref|ZP_13545125.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1A]
 gi|419002892|ref|ZP_13550419.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1B]
 gi|419008585|ref|ZP_13556016.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1C]
 gi|419014269|ref|ZP_13561619.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1D]
 gi|419019267|ref|ZP_13566574.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1E]
 gi|419024770|ref|ZP_13571996.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2A]
 gi|419029809|ref|ZP_13576972.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2C]
 gi|419035504|ref|ZP_13582590.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2D]
 gi|419040497|ref|ZP_13587525.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2E]
 gi|254788663|sp|B7UFZ8.1|FADJ_ECO27 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|215265625|emb|CAS10028.1| fused enoyl-CoA hydratase and epimerase
           andisomerase/3-hydroxyacyl-CoA dehydrogenase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|312287839|gb|EFR15744.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           2362-75]
 gi|377843358|gb|EHU08398.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1A]
 gi|377844103|gb|EHU09140.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1C]
 gi|377847771|gb|EHU12769.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1B]
 gi|377857122|gb|EHU21977.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1D]
 gi|377860321|gb|EHU25147.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC1E]
 gi|377863554|gb|EHU28359.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2A]
 gi|377874018|gb|EHU38649.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2B]
 gi|377877991|gb|EHU42580.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2C]
 gi|377879860|gb|EHU44432.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2D]
 gi|377890537|gb|EHU54994.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC2E]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASSEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|193069764|ref|ZP_03050715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           E110019]
 gi|415815346|ref|ZP_11506866.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           LT-68]
 gi|419950639|ref|ZP_14466850.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli CUMT8]
 gi|432968440|ref|ZP_20157355.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE203]
 gi|192956966|gb|EDV87418.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           E110019]
 gi|323170387|gb|EFZ56040.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           LT-68]
 gi|388416470|gb|EIL76357.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli CUMT8]
 gi|431471557|gb|ELH51450.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE203]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|306814548|ref|ZP_07448710.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli NC101]
 gi|432382078|ref|ZP_19625021.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE15]
 gi|432387891|ref|ZP_19630779.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE16]
 gi|432514641|ref|ZP_19751864.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE224]
 gi|432612198|ref|ZP_19848360.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE72]
 gi|432646911|ref|ZP_19882700.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE86]
 gi|432656493|ref|ZP_19892196.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE93]
 gi|432699770|ref|ZP_19934923.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE169]
 gi|432746382|ref|ZP_19981047.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE43]
 gi|432905629|ref|ZP_20114464.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE194]
 gi|432938725|ref|ZP_20136968.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE183]
 gi|432972541|ref|ZP_20161408.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE207]
 gi|432986098|ref|ZP_20174820.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE215]
 gi|433039338|ref|ZP_20226937.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE113]
 gi|433083297|ref|ZP_20269753.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE133]
 gi|433101884|ref|ZP_20287970.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE145]
 gi|433144937|ref|ZP_20330079.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE168]
 gi|433189122|ref|ZP_20373220.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE88]
 gi|305851942|gb|EFM52394.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli NC101]
 gi|430906090|gb|ELC27696.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE16]
 gi|430907553|gb|ELC29051.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE15]
 gi|431041397|gb|ELD51898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE224]
 gi|431148372|gb|ELE49663.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE72]
 gi|431179566|gb|ELE79458.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE86]
 gi|431190359|gb|ELE89758.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE93]
 gi|431242746|gb|ELF37136.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE169]
 gi|431290920|gb|ELF81443.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE43]
 gi|431432143|gb|ELH13915.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE194]
 gi|431462711|gb|ELH42918.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE183]
 gi|431482043|gb|ELH61750.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE207]
 gi|431499563|gb|ELH78584.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE215]
 gi|431551438|gb|ELI25424.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE113]
 gi|431601421|gb|ELI70937.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE133]
 gi|431619478|gb|ELI88402.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE145]
 gi|431660914|gb|ELJ27771.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE168]
 gi|431705828|gb|ELJ70418.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE88]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDLGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|91211637|ref|YP_541623.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli UTI89]
 gi|117624529|ref|YP_853442.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli APEC O1]
 gi|237704820|ref|ZP_04535301.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia sp. 3_2_53FAA]
 gi|386600263|ref|YP_006101769.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           IHE3034]
 gi|386603639|ref|YP_006109939.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli UM146]
 gi|417085628|ref|ZP_11953034.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli cloneA_i1]
 gi|419947329|ref|ZP_14463682.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli HM605]
 gi|422357918|ref|ZP_16438579.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           110-3]
 gi|422749617|ref|ZP_16803529.1| fatty oxidation complex [Escherichia coli H252]
 gi|422755761|ref|ZP_16809585.1| fatty oxidation complex [Escherichia coli H263]
 gi|422837608|ref|ZP_16885581.1| fatty acid oxidation complex subunit alpha [Escherichia coli H397]
 gi|432574417|ref|ZP_19810897.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE55]
 gi|432588665|ref|ZP_19825021.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE58]
 gi|432598325|ref|ZP_19834600.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE62]
 gi|432755153|ref|ZP_19989702.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE22]
 gi|432779287|ref|ZP_20013520.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE59]
 gi|432788225|ref|ZP_20022356.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE65]
 gi|432821674|ref|ZP_20055365.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE118]
 gi|432827806|ref|ZP_20061457.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE123]
 gi|433008378|ref|ZP_20196795.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE229]
 gi|433164212|ref|ZP_20348950.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE179]
 gi|433169317|ref|ZP_20353945.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE180]
 gi|123387869|sp|Q1R972.1|FADJ_ECOUT RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|166972670|sp|A1ADI8.1|FADJ_ECOK1 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|91073211|gb|ABE08092.1| putative enzyme [Escherichia coli UTI89]
 gi|115513653|gb|ABJ01728.1| putative 3-hydroxyacyl-CoA dehydrogenase [Escherichia coli APEC O1]
 gi|226901186|gb|EEH87445.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia sp. 3_2_53FAA]
 gi|294493788|gb|ADE92544.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           IHE3034]
 gi|307626123|gb|ADN70427.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli UM146]
 gi|315288286|gb|EFU47685.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           110-3]
 gi|323952132|gb|EGB48006.1| fatty oxidation complex [Escherichia coli H252]
 gi|323955861|gb|EGB51616.1| fatty oxidation complex [Escherichia coli H263]
 gi|355351134|gb|EHG00327.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli cloneA_i1]
 gi|371610517|gb|EHN99045.1| fatty acid oxidation complex subunit alpha [Escherichia coli H397]
 gi|388410897|gb|EIL71098.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli HM605]
 gi|431108015|gb|ELE12179.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE55]
 gi|431120998|gb|ELE23996.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE58]
 gi|431130277|gb|ELE32382.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE62]
 gi|431301882|gb|ELF91079.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE22]
 gi|431326103|gb|ELG13465.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE59]
 gi|431336792|gb|ELG23893.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE65]
 gi|431367326|gb|ELG53803.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE118]
 gi|431372002|gb|ELG57704.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE123]
 gi|431523708|gb|ELI00845.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE229]
 gi|431687517|gb|ELJ53068.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE179]
 gi|431688169|gb|ELJ53710.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE180]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|395230400|ref|ZP_10408704.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter sp. A1]
 gi|424731539|ref|ZP_18160123.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter sp. L17]
 gi|394715785|gb|EJF21570.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter sp. A1]
 gi|422894190|gb|EKU34005.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter sp. L17]
          Length = 715

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 170/550 (30%), Positives = 278/550 (50%), Gaps = 24/550 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  K+GL+D VV    LL+     A+++A +     R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A      ++  A+KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H+FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRHIFFANTDVKKDPG-SDAKPGPLDSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G +DY  F   D++IEAV E +
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSIDYRGFSHRDLIIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH + A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 SLKQRMVAEVEQNCAPHTVFASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS Q I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY---EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y    + SK + DP++  +I        +   G+   +T  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGVKGRKSKKQVDPAIYTLI-------GVQGQGR---LTAAQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E IV  A D D  +V G+ FP + GG   + D++GA  V  +L++ +  YG+ F
Sbjct: 630 AARCFDEKIVRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLTTQYGSRF 689

Query: 534 KPSRFLEERA 543
            P   L + A
Sbjct: 690 APCEQLLQMA 699


>gi|432398215|ref|ZP_19640995.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE25]
 gi|432407394|ref|ZP_19650103.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE28]
 gi|432723790|ref|ZP_19958710.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE17]
 gi|432728377|ref|ZP_19963256.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE18]
 gi|432742071|ref|ZP_19976790.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE23]
 gi|432895356|ref|ZP_20107076.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE165]
 gi|432991378|ref|ZP_20180042.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE217]
 gi|433111589|ref|ZP_20297454.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE150]
 gi|430915072|gb|ELC36159.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE25]
 gi|430930153|gb|ELC50662.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE28]
 gi|431266344|gb|ELF57906.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE17]
 gi|431274066|gb|ELF65140.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE18]
 gi|431283762|gb|ELF74621.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE23]
 gi|431421723|gb|ELH03935.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE165]
 gi|431495460|gb|ELH75046.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE217]
 gi|431628893|gb|ELI97269.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE150]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/554 (31%), Positives = 280/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKFSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K+P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKMPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKANG 417
           +A+  FG P+GP QLLD  G           + A+ +R S  + +V  +L   R G+ NG
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGERFSASANVVSSILNDDRKGRKNG 580

Query: 418 KGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           +G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++N
Sbjct: 581 RGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ 
Sbjct: 629 EAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L E + +G
Sbjct: 689 FTPCDRLVEMSERG 702


>gi|83954644|ref|ZP_00963355.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Sulfitobacter sp. NAS-14.1]
 gi|83840928|gb|EAP80099.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Sulfitobacter sp. NAS-14.1]
          Length = 698

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 163/453 (35%), Positives = 246/453 (54%), Gaps = 18/453 (3%)

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G+L E K+F EL+  D  +G++H FF++RA   +P +   G++PR ++ + +IGGG MG+
Sbjct: 245 GMLAERKIFMELMETDQRQGMIHAFFSERAVGNLPELK--GVEPRALQSIGIIGGGTMGA 302

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK----ANNALKMLK 216
           GIATA +L    VVL E+  +        I  N+ G + RGK+TQ K     N AL++  
Sbjct: 303 GIATAALLAGFNVVLIEMKEDAAEAARGRIAGNLSGALKRGKITQMKYDAMTNTALEV-- 360

Query: 217 GVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 276
             ++Y     VD+VIEAV E + +K+++F +L+  C P  ILA+NTS +D++ +   TS 
Sbjct: 361 -SINYDSLASVDLVIEAVFEDMGVKKEVFGKLDAVCKPGAILASNTSYLDVDEIAASTSR 419

Query: 277 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 336
              +IG HFFSPAH+M LLE+V  E+T+  V+     +GK + K+ V  G C GF  NR 
Sbjct: 420 PADVIGLHFFSPAHIMKLLEVVVAEKTALDVVATGFALGKALNKISVRAGVCDGFIGNRI 479

Query: 337 FFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR 396
              Y  +A  +V  G   F+ID A+  FG  +GPF + DLAG  +  AT K         
Sbjct: 480 LATYRTAADHMVLDGASPFQIDKALVDFGFAMGPFAVGDLAGLDIGWATRKRKAATRHPA 539

Query: 397 SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK---PKPDPSVLPIIEECRRLSNIMPGGK 453
                  D + ++G  G+  GKG Y YE GS+   P P+ S L   E   R      G  
Sbjct: 540 ERVPTYPDKICEAGNFGQKTGKGYYIYEAGSRGGVPNPEVSELIAAERAER------GIT 593

Query: 454 PISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAV 513
           P   T+ EIV   +  +VNE+ +V+ EGI  R  D+D   + G  FP Y GG + WAD  
Sbjct: 594 PRDFTDAEIVRRYMAAMVNEAAKVVGEGIAKRPLDVDMVLLFGYGFPRYWGGPMKWADLQ 653

Query: 514 GANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           G   +   ++ +++    F++P+  L++   +G
Sbjct: 654 GLPALLADIESYAKEDAWFWEPAPLLKQLVAEG 686


>gi|432554428|ref|ZP_19791150.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE47]
 gi|433198978|ref|ZP_20382878.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE94]
 gi|431083474|gb|ELD89650.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE47]
 gi|431720991|gb|ELJ84992.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE94]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPTTERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|419402810|ref|ZP_13943534.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15C]
 gi|378247344|gb|EHY07263.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15C]
          Length = 711

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|24113713|ref|NP_708223.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella flexneri 2a str. 301]
 gi|30063762|ref|NP_837933.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella flexneri 2a str. 2457T]
 gi|74312856|ref|YP_311275.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella sonnei Ss046]
 gi|383179315|ref|YP_005457320.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella sonnei 53G]
 gi|384543995|ref|YP_005728058.1| Fatty acid oxidation complex subunit alpha [Shigella flexneri
           2002017]
 gi|414576963|ref|ZP_11434145.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
           3233-85]
 gi|415844373|ref|ZP_11524115.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei 53G]
 gi|415853520|ref|ZP_11529496.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri 2a
           str. 2457T]
 gi|417713399|ref|ZP_12362365.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-272]
 gi|417718240|ref|ZP_12367138.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-227]
 gi|417723955|ref|ZP_12372759.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-304]
 gi|417729271|ref|ZP_12377969.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-671]
 gi|417734462|ref|ZP_12383113.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           2747-71]
 gi|417744224|ref|ZP_12392750.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           2930-71]
 gi|418257334|ref|ZP_12881002.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           6603-63]
 gi|418266751|ref|ZP_12886232.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei str.
           Moseley]
 gi|420321245|ref|ZP_14823074.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           2850-71]
 gi|420332311|ref|ZP_14833966.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-1770]
 gi|420342670|ref|ZP_14844143.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-404]
 gi|420359425|ref|ZP_14860399.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
           3226-85]
 gi|81724310|sp|Q83QQ0.1|FADJ_SHIFL RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|123773483|sp|Q3YZM2.1|FADJ_SHISS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|24052784|gb|AAN43930.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30042017|gb|AAP17743.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|73856333|gb|AAZ89040.1| putative enzyme [Shigella sonnei Ss046]
 gi|281601781|gb|ADA74765.1| Fatty acid oxidation complex subunit alpha [Shigella flexneri
           2002017]
 gi|313651171|gb|EFS15570.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri 2a
           str. 2457T]
 gi|323168485|gb|EFZ54165.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei 53G]
 gi|332755396|gb|EGJ85760.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-671]
 gi|332756536|gb|EGJ86887.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           2747-71]
 gi|332766165|gb|EGJ96375.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           2930-71]
 gi|333002714|gb|EGK22274.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-272]
 gi|333016250|gb|EGK35581.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-304]
 gi|333016597|gb|EGK35927.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-227]
 gi|391247766|gb|EIQ07012.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           2850-71]
 gi|391250352|gb|EIQ09574.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-1770]
 gi|391265743|gb|EIQ24710.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           K-404]
 gi|391282106|gb|EIQ40743.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
           3226-85]
 gi|391284716|gb|EIQ43311.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
           3233-85]
 gi|397896956|gb|EJL13367.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           6603-63]
 gi|397899576|gb|EJL15950.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei str.
           Moseley]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|419132366|ref|ZP_13677203.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5D]
 gi|377975329|gb|EHV38650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5D]
          Length = 712

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 281 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   +PL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|419397468|ref|ZP_13938236.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15B]
 gi|419407929|ref|ZP_13948618.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15D]
 gi|419413516|ref|ZP_13954168.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15E]
 gi|422762156|ref|ZP_16815913.1| fatty oxidation complex [Escherichia coli E1167]
 gi|422777623|ref|ZP_16831275.1| fatty oxidation complex [Escherichia coli H120]
 gi|432832359|ref|ZP_20065933.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE135]
 gi|323944852|gb|EGB40918.1| fatty oxidation complex [Escherichia coli H120]
 gi|324117782|gb|EGC11681.1| fatty oxidation complex [Escherichia coli E1167]
 gi|378243589|gb|EHY03535.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15B]
 gi|378254308|gb|EHY14172.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15D]
 gi|378258948|gb|EHY18764.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15E]
 gi|431376329|gb|ELG61652.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE135]
          Length = 713

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|419392433|ref|ZP_13933245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15A]
 gi|378237633|gb|EHX97656.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC15A]
          Length = 720

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|110806304|ref|YP_689824.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella flexneri 5 str. 8401]
 gi|424838703|ref|ZP_18263340.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella flexneri 5a str. M90T]
 gi|123048046|sp|Q0T2E6.1|FADJ_SHIF8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|110615852|gb|ABF04519.1| putative enzyme [Shigella flexneri 5 str. 8401]
 gi|383467755|gb|EID62776.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella flexneri 5a str. M90T]
          Length = 714

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|387608028|ref|YP_006096884.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
           hydratase; 3-hydroxyacyl-CoA dehydrogenase;
           3-hydroxybutyryl-CoA epimerase] [Escherichia coli 042]
 gi|284922328|emb|CBG35413.1| fatty acid oxidation complex alpha subunit [includes: enoyl-CoA
           hydratase; 3-hydroxyacyl-CoA dehydrogenase;
           3-hydroxybutyryl-CoA epimerase] [Escherichia coli 042]
          Length = 714

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATECILVVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E + +G
Sbjct: 690 TPCERLVEMSKRG 702


>gi|218690500|ref|YP_002398712.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli ED1a]
 gi|419701173|ref|ZP_14228775.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli SCI-07]
 gi|422379520|ref|ZP_16459715.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           57-2]
 gi|432733074|ref|ZP_19967906.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE45]
 gi|432760159|ref|ZP_19994653.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE46]
 gi|254788658|sp|B7MY16.1|FADJ_ECO81 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|218428064|emb|CAR08982.2| fused enoyl-CoA hydratase and epimerase and isomerase ;
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli ED1a]
 gi|324009263|gb|EGB78482.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           57-2]
 gi|380347919|gb|EIA36205.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli SCI-07]
 gi|431275289|gb|ELF66333.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE45]
 gi|431307813|gb|ELF96103.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE46]
          Length = 714

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|386035884|ref|YP_005955797.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae KCTC 2242]
 gi|424831674|ref|ZP_18256402.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
 gi|339763012|gb|AEJ99232.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae KCTC 2242]
 gi|414709109|emb|CCN30813.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
           subsp. pneumoniae Ecl8]
          Length = 714

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 179/554 (32%), Positives = 281/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSQQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P   + G  P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 690 FTPCDTLLRMAEQG 703


>gi|455644361|gb|EMF23461.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter freundii GTC 09479]
          Length = 715

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 177/551 (32%), Positives = 285/551 (51%), Gaps = 26/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  K+GL+D VV    LL+     A+++A +     R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEA----AVELAKKDSSAQRTLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A      ++  A+KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRMASKKTAQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L H+FFA     K P       KP  +  V V+GGGLMG GIA        + V +K+
Sbjct: 283 QALRHIFFANTDVKKDPGSD---AKPGPLNSVGVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N++ +   +K     +   V R  +   + +  L ++ G +DY  F   D++IEAV E 
Sbjct: 340 INAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGSIDYRGFAHRDLIIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +E+E+ C PH + A+NTS++ +  +    +  +++IG HFFSP   MPL+E+
Sbjct: 400 LSLKQRMVAEVEQNCAPHTVFASNTSSLPIGDIAANATRPEQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS Q I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  I
Sbjct: 460 IPHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ 
Sbjct: 520 DAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRK 578

Query: 416 NGKGLYTY---EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + SK + DP++  +I        +   G+   +T  ++ E  +  ++N
Sbjct: 579 NGRGFYLYGVKGRKSKKQVDPAIYTLI-------GVQGQGR---LTAAQVAERCVMLMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E IV  A D D  +V G+ FP + GG   + D++GA  V  +L++ +  YG+ 
Sbjct: 629 EAARCFDEKIVRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGDVVATLQRLTTQYGSR 688

Query: 533 FKPSRFLEERA 543
           F P   L + A
Sbjct: 689 FAPCEQLLQMA 699


>gi|419175972|ref|ZP_13719788.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7B]
 gi|378031944|gb|EHV94526.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC7B]
          Length = 714

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|398975662|ref|ZP_10685737.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM25]
 gi|398140107|gb|EJM29085.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM25]
          Length = 715

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 276/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   I   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|417828770|ref|ZP_12475321.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           J1713]
 gi|335574625|gb|EGM60943.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           J1713]
          Length = 714

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPENVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|419931035|ref|ZP_14448626.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 541-1]
 gi|388399288|gb|EIL60090.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 541-1]
          Length = 714

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   +PL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|417708387|ref|ZP_12357420.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           VA-6]
 gi|420364044|ref|ZP_14864927.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
           4822-66]
 gi|333001487|gb|EGK21055.1| fatty oxidation complex, alpha subunit FadJ [Shigella flexneri
           VA-6]
 gi|391293707|gb|EIQ51966.1| fatty oxidation complex, alpha subunit FadJ [Shigella sonnei
           4822-66]
          Length = 712

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 165 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 220

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 221 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 280

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 281 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 338

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 339 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 398

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 399 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 458

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 459 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 518

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 519 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 577

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 578 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 626 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 685

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 686 RFTPCERLVEMGARG 700


>gi|295982065|pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
 gi|295982066|pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
          Length = 727

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 179/568 (31%), Positives = 283/568 (49%), Gaps = 41/568 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           K ++++E  +LG++DAVV S   EE +K + ++    I  RR   KP          + S
Sbjct: 160 KYLSADEALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRIFNKP----------VPS 209

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L     V   A  + +K  P +   + C+  I+  + H    G+ +E K+F  L     +
Sbjct: 210 LPNMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQA 269

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           + L + FFA+++ +K    +    K    + V  V V+G G MG GIA +     I VV 
Sbjct: 270 KALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVA 329

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E + + L    K I   +    +R    Q+   +A   L+      E   VD+V+EAV 
Sbjct: 330 VESDPKQLDAAKKIITFTLEKEASRAH--QNGQASAKPKLRFSSSTKELSTVDLVVEAVF 387

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+K+F+EL   C P   L TNTS ++++ +   T     +IG HFFSPAHVM LL
Sbjct: 388 EDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLL 447

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M++ K I K+ VVVGNC GF  NR   PY      L+  G    
Sbjct: 448 EVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPE 507

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVD 404
            +D  +  FG  +GPF++ DLAG  V          T        P R    S  SPL D
Sbjct: 508 DVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGD 567

Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           +L ++GR G+  GKG Y Y+K  G   KPDP +   + + R + +I    +  +++++EI
Sbjct: 568 MLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEEI 623

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           +E  L+ ++NE+ R+LEEG+  R   +D   + G  +P ++GG +F+A +VG   V   L
Sbjct: 624 LERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKL 683

Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP 548
           +K+ +   +    +PS +L     +G P
Sbjct: 684 QKYYRQNPDIPQLEPSDYLRRLVAQGSP 711


>gi|75462909|sp|Q9AHY3.2|FADB_PSEPU RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|57546096|gb|AAK18167.2|AF290949_1 FadB [Pseudomonas putida]
          Length = 715

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVDKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDAAVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|291283581|ref|YP_003500399.1| Fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O55:H7 str. CB9615]
 gi|387507726|ref|YP_006159982.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O55:H7 str. RM12579]
 gi|416819946|ref|ZP_11893533.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|419115736|ref|ZP_13660753.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5A]
 gi|419126908|ref|ZP_13671793.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5C]
 gi|419137401|ref|ZP_13682197.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5E]
 gi|425250062|ref|ZP_18643011.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5905]
 gi|209764654|gb|ACI80639.1| putative enzyme [Escherichia coli]
 gi|290763454|gb|ADD57415.1| Fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           O55:H7 str. CB9615]
 gi|320662940|gb|EFX30264.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|374359720|gb|AEZ41427.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O55:H7 str. RM12579]
 gi|377960330|gb|EHV23814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5A]
 gi|377975020|gb|EHV38345.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5C]
 gi|377984394|gb|EHV47629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC5E]
 gi|408163920|gb|EKH91767.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 5905]
          Length = 714

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   +PL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKIPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|416898407|ref|ZP_11927971.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_7v]
 gi|417115680|ref|ZP_11966816.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           1.2741]
 gi|422799647|ref|ZP_16848146.1| fatty oxidation complex [Escherichia coli M863]
 gi|323967782|gb|EGB63194.1| fatty oxidation complex [Escherichia coli M863]
 gi|327252611|gb|EGE64270.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_7v]
 gi|386141099|gb|EIG82251.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           1.2741]
          Length = 714

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 178/555 (32%), Positives = 280/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++ +KLGL+D VV    LL+     A+++A + +   R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAFKLGLVDDVVPHSILLE----SAVELAKQDRLSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +   +KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEQKTQGNYPATKRILEVIETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQK+ +E+E+ C  H I A+NTS++ ++ +    S  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQKMVAEVEENCATHTIFASNTSSLPISDIAAHASRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHTGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y  KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGPKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMMML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + DA+GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDALGAAEVVAIMQRLTARYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|148548812|ref|YP_001268914.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida F1]
 gi|166971633|sp|A5W6H0.1|FADB_PSEP1 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|148512870|gb|ABQ79730.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudomonas putida F1]
          Length = 715

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L +S R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYESNRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|398910903|ref|ZP_10655274.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM49]
 gi|398927425|ref|ZP_10662958.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM48]
 gi|398169825|gb|EJM57794.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM48]
 gi|398184988|gb|EJM72411.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM49]
          Length = 715

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 175/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ LV 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLVG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKPIVFEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|400260686|pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           2trans-hexenoyl-coa
 gi|400260687|pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           2trans-hexenoyl-coa
          Length = 742

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 179/568 (31%), Positives = 283/568 (49%), Gaps = 41/568 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           K ++++E  +LG++DAVV S   EE +K + ++    I  RR   KP          + S
Sbjct: 175 KYLSADEALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRIFNKP----------VPS 224

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L     V   A  + +K  P +   + C+  I+  + H    G+ +E K+F  L     +
Sbjct: 225 LPNMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQA 284

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           + L + FFA+++ +K    +    K    + V  V V+G G MG GIA +     I VV 
Sbjct: 285 KALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVA 344

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E + + L    K I   +    +R    Q+   +A   L+      E   VD+V+EAV 
Sbjct: 345 VESDPKQLDAAKKIITFTLEKEASRAH--QNGQASAKPKLRFSSSTKELSTVDLVVEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+K+F+EL   C P   L TNTS ++++ +   T     +IG HFFSPAHVM LL
Sbjct: 403 EDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLL 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M++ K I K+ VVVGNC GF  NR   PY      L+  G    
Sbjct: 463 EVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVD 404
            +D  +  FG  +GPF++ DLAG  V          T        P R    S  SPL D
Sbjct: 523 DVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGD 582

Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           +L ++GR G+  GKG Y Y+K  G   KPDP +   + + R + +I    +  +++++EI
Sbjct: 583 MLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEEI 638

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           +E  L+ ++NE+ R+LEEG+  R   +D   + G  +P ++GG +F+A +VG   V   L
Sbjct: 639 LERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKL 698

Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP 548
           +K+ +   +    +PS +L     +G P
Sbjct: 699 QKYYRQNPDIPQLEPSDYLRRLVAQGSP 726


>gi|397164597|ref|ZP_10488052.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
           radicincitans DSM 16656]
 gi|396093745|gb|EJI91300.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
           radicincitans DSM 16656]
          Length = 715

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 175/554 (31%), Positives = 271/554 (48%), Gaps = 24/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K+GL+D VV    LL+     A+D+A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRPRQALKVGLVDDVVPQSILLEA----AVDLAKQGRPVARHLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     +++   +KT  N P     L VIE G+  G  SG   EA+ F +L M   S
Sbjct: 223 LGRALLFRMVSKKTEQKTQGNYPAATRILSVIETGLTQGRSSGYDAEARAFGQLAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H+FFA     K P  +++   P     V   G    G    TA     + V +K++
Sbjct: 283 QALRHLFFASTGVKKDPG-SEVQAGPLNTIGVLGGGLMGGGIAFVTAS-KAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  L   + +  L  + G LD+S F   D+VIEAV E +
Sbjct: 341 NAKGINHALKYSWEELDKKVRRRYLKAGERDKQLAKISGTLDFSGFAQRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQK+ +E+E  C  H I A+NTS++ +  +    +  ++IIG HFFSP   MPL+E++
Sbjct: 401 ALKQKMVAEVEAHCSAHTIFASNTSSLPIGDIAAHAARPEKIIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               T  Q I   + + K   K P+VV +  GF VNR   PY   A  L+S G  +  ID
Sbjct: 461 PHAGTDEQTIATTVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAIRLLSEGECIEDID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
            A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 RALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAYGER-FSAPASIVSAILNDDRKGRKN 579

Query: 417 GKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y    + SK +PDP++ P+I           GG+   ++ +++ E  +  ++NE
Sbjct: 580 GRGFYLYPAKGRKSKKQPDPAIYPLI-------GASGGGR---LSAEQMAERCVLLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E ++  A D D  +V G+ FP + GG   +    GA  V   L++    YG  F
Sbjct: 630 AVRCFDEQVIRSARDGDIGAVFGIGFPPFLGGPFHYIATSGAGDVVARLQRLEAQYGARF 689

Query: 534 KPSRFLEERATKGI 547
            P   L   A +G+
Sbjct: 690 APCEPLLRMAEQGV 703


>gi|389840139|ref|YP_006342223.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter sakazakii ES15]
 gi|387850615|gb|AFJ98712.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter sakazakii ES15]
          Length = 717

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 182/554 (32%), Positives = 280/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K GL+D VV    LL+     A ++A +R+P  R L   ++L  G 
Sbjct: 167 MILAGKQLRPRQALKAGLVDDVVPQSILLEA----AAELAKKRRPAPRRLPVRERLLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           +  A     + +   +KT  N P  Q  +DV+  G+  G  SG   EA+ F EL M   S
Sbjct: 223 IGRALLFRMVTQKTHQKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPES 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
             L  +FFA   T+++   T     PR +  V V+GGGLMG GIA        + V +K+
Sbjct: 283 AALRGLFFA---TTELKKETGSEAAPRALHSVGVLGGGLMGGGIAYVTATKARLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           ++ + +   +K     +   V R  L   + +  + ++    DY  F   D+V+EAV E 
Sbjct: 340 ISEKGINHALKYSWDLLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQK+ +E+E    PH I A+NTS++ +  +    +  +++IG H+FSP   MPL+E+
Sbjct: 400 LTLKQKMVAEIEAHTAPHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSA+ I   + + K   K P+VV +C GF VNR   PY   A   +  G  + +I
Sbjct: 460 IPHAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+   G P+GP QLLD  G  V        ++A+  R F +P   V  +L   R G+ 
Sbjct: 520 DEALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + SK + DP+V  +I        + PGGK   ++ +EI E  +  ++N
Sbjct: 579 NGRGFYLYPAKGRKSKKQVDPAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+EG+V  A D D  +V G+ FP + GG   + D +GA  V T+L + +  YG+ 
Sbjct: 629 EAARCLDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAAVATTLTRLATRYGDR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L   A  G
Sbjct: 689 FTPCDRLLRMAQTG 702


>gi|152971261|ref|YP_001336370.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|166972673|sp|A6TC19.1|FADJ_KLEP7 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|150956110|gb|ABR78140.1| bifunctional fatty acid oxidation complex protein: putative
           enoyl-CoA hydratase/isomerase/putative NAD(P)-binding
           dehydrogenase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
          Length = 714

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 279/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P        P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPGAE---AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEM 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 690 FTPCDTLLRMAEQG 703


>gi|432869707|ref|ZP_20090300.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE147]
 gi|431410293|gb|ELG93455.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE147]
          Length = 714

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K  +VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LEE ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCLEEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E + +G
Sbjct: 690 TPCERLVEMSKRG 702


>gi|398896731|ref|ZP_10647755.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM55]
 gi|398177995|gb|EJM65655.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM55]
          Length = 715

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEQLQDAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|419939000|ref|ZP_14455803.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 75]
 gi|388408717|gb|EIL69050.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 75]
          Length = 714

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVTEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|355685539|gb|AER97768.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Mustela putorius furo]
          Length = 722

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 182/584 (31%), Positives = 290/584 (49%), Gaps = 52/584 (8%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLK-VSRLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I+++E  KLG++D +V S   EE ++ V ++    + +RR   KP I+S    D    
Sbjct: 156 RHISADEALKLGILDKMVNSDPVEEAIELVQKISDQPLESRRLCNKP-IQSFPNMDS--- 211

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                 +   A L+ +K  P     + C+  I+  + +    G+ KE ++F  L     +
Sbjct: 212 ------IFNEALLKMRKQHPGCLSQETCVRAIQAAVQYPYEVGIKKEEELFMYLQKSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L +VFFA+R  SK    +    K    + +  V V+G G MG GI TA     I V+ 
Sbjct: 266 RALQYVFFAERNASKWSTPSGASWKTATAQPISSVGVVGLGTMGRGIVTALAKAKIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--EFKDVDMVIEA 233
            E++     K ++T +  +  L+ +      ++++     K  L  S  E   VD+VIEA
Sbjct: 326 VELDK----KQLETADQIITSLLEKEASKMQRSSHHWLGPKPRLTTSLKELGGVDLVIEA 381

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LK+++F+EL   C P   L TNTS ++++ +   T     +IG HFFSPAH+M 
Sbjct: 382 VFEEINLKKQVFAELSAVCKPEAFLCTNTSALNIDEIASSTDRPHLVIGTHFFSPAHIMK 441

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLEI+ ++ +S   I  +M + K +KK+ VVVGNC GF  NR   PY      L+  G  
Sbjct: 442 LLEIIPSQYSSPTTIATVMNLSKKMKKIGVVVGNCFGFVGNRMLKPYYNQTYFLLEEGSK 501

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDRSFQS----PL 402
              ID  +  FG  +GPF++ DLAG  V          T        P R   S    P+
Sbjct: 502 PEEIDQVLEEFGFKMGPFRVSDLAGLDVGWKSRQGQGLTGPMLPSGTPARKRGSERYCPI 561

Query: 403 VDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
            D+L +SGR G+  GKG Y Y+K  G   KPDP +   + + R+  +I    +P  +++ 
Sbjct: 562 PDMLCESGRFGQKTGKGWYLYDKPLGRIHKPDPWLSEFLSQYRQTYHI----EPRVISQD 617

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EI+E  L+ ++NE+ R+L EG+      +D   + G  +P ++GG +F+A  VG   V  
Sbjct: 618 EILERCLYSLINEAFRILGEGMAATPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLE 677

Query: 521 SLKKWSQLYGNF--FKPSRFLEERATKGIP-------LSAPVSS 555
            L+K+ +   +    +P  +L++ A  G P       L+ P SS
Sbjct: 678 KLQKYYRQNPDIPQLEPCDYLKKLAYLGNPPLKEWQSLAGPPSS 721


>gi|300928514|ref|ZP_07144040.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           187-1]
 gi|300463509|gb|EFK27002.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           187-1]
          Length = 714

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLDGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|170682519|ref|YP_001744544.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli SMS-3-5]
 gi|254788653|sp|B1LME7.1|FADJ_ECOSM RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|170520237|gb|ACB18415.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           SMS-3-5]
          Length = 714

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K  + +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKK-DSGSDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|422834500|ref|ZP_16882561.1| fatty acid oxidation complex subunit alpha [Escherichia coli E101]
 gi|371601292|gb|EHN90042.1| fatty acid oxidation complex subunit alpha [Escherichia coli E101]
          Length = 714

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS  +            + E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPL------------VAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|432450494|ref|ZP_19692758.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE193]
 gi|433034173|ref|ZP_20221888.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE112]
 gi|430979477|gb|ELC96253.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE193]
 gi|431550559|gb|ELI24549.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE112]
          Length = 714

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A +  P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLVLISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|75451515|sp|Q93Q12.1|FADB_PSEOL RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|15077078|gb|AAK83058.1|AF288535_1 FadB [Pseudomonas oleovorans]
          Length = 715

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 276/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D        ++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDAKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVETQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D SVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVADASVLDVLKPIVFEQR------------EVTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|425082566|ref|ZP_18485663.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW2]
 gi|428936275|ref|ZP_19009694.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae JHCK1]
 gi|405600818|gb|EKB73983.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW2]
 gi|426298678|gb|EKV61066.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae JHCK1]
          Length = 714

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 179/554 (32%), Positives = 281/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVSVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P   + G  P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 690 FTPCDTLLRMAEQG 703


>gi|329998416|ref|ZP_08303100.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
           92-3]
 gi|365137258|ref|ZP_09343978.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
           4_1_44FAA]
 gi|419764099|ref|ZP_14290339.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
           subsp. pneumoniae DSM 30104]
 gi|328538691|gb|EGF64784.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella sp. MS
           92-3]
 gi|363656270|gb|EHL95034.1| fatty acid oxidation complex subunit alpha [Klebsiella sp.
           4_1_44FAA]
 gi|397742682|gb|EJK89900.1| fatty oxidation complex, alpha subunit FadJ [Klebsiella pneumoniae
           subsp. pneumoniae DSM 30104]
          Length = 714

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 279/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P        P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPGAE---AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 690 FTPCDTLLRMAEQG 703


>gi|400260680|pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) In Apo Form
 gi|400260681|pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) In Apo Form
 gi|400260682|pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           (2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
 gi|400260683|pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           (2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
 gi|400260684|pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           3s-hydroxy-hexanoyl-coa
 gi|400260685|pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           3s-hydroxy-hexanoyl-coa
 gi|400260688|pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           3s-hydroxy-decanoyl-coa
 gi|400260689|pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
           Enzyme Type 1 (rpmfe1) Complexed With
           3s-hydroxy-decanoyl-coa
          Length = 742

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 179/568 (31%), Positives = 283/568 (49%), Gaps = 41/568 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           K ++++E  +LG++DAVV S   EE +K + ++    I  RR   KP          + S
Sbjct: 175 KYLSADEALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRIFNKP----------VPS 224

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L     V   A  + +K  P +   + C+  I+  + H    G+ +E K+F  L     +
Sbjct: 225 LPNMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQA 284

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           + L + FFA+++ +K    +    K    + V  V V+G G MG GIA +     I VV 
Sbjct: 285 KALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVA 344

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E + + L    K I   +    +R    Q+   +A   L+      E   VD+V+EAV 
Sbjct: 345 VESDPKQLDAAKKIITFTLEKEASRAH--QNGQASAKPKLRFSSSTKELSTVDLVVEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+K+F+EL   C P   L TNTS ++++ +   T     +IG HFFSPAHVM LL
Sbjct: 403 EDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLL 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M++ K I K+ VVVGNC GF  NR   PY      L+  G    
Sbjct: 463 EVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVD 404
            +D  +  FG  +GPF++ DLAG  V          T        P R    S  SPL D
Sbjct: 523 DVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGD 582

Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           +L ++GR G+  GKG Y Y+K  G   KPDP +   + + R + +I    +  +++++EI
Sbjct: 583 MLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEEI 638

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           +E  L+ ++NE+ R+LEEG+  R   +D   + G  +P ++GG +F+A +VG   V   L
Sbjct: 639 LERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKL 698

Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP 548
           +K+ +   +    +PS +L     +G P
Sbjct: 699 QKYYRQNPDIPQLEPSDYLRRLVAQGSP 726


>gi|19424318|ref|NP_598290.1| peroxisomal bifunctional enzyme [Rattus norvegicus]
 gi|119120|sp|P07896.2|ECHP_RAT RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
           Short=PBFE; Includes: RecName: Full=Enoyl-CoA
           hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|206069|gb|AAA41825.1| peroxisomal enoyl-CoA: hydrotase-3-hydroxyacyl-CoA [Rattus
           norvegicus]
 gi|59809132|gb|AAH89777.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Rattus norvegicus]
 gi|149019890|gb|EDL78038.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Rattus norvegicus]
          Length = 722

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 179/568 (31%), Positives = 283/568 (49%), Gaps = 41/568 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           K ++++E  +LG++DAVV S   EE +K + ++    I  RR   KP          + S
Sbjct: 155 KYLSADEALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRIFNKP----------VPS 204

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L     V   A  + +K  P +   + C+  I+  + H    G+ +E K+F  L     +
Sbjct: 205 LPNMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQA 264

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           + L + FFA+++ +K    +    K    + V  V V+G G MG GIA +     I VV 
Sbjct: 265 KALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVA 324

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E + + L    K I   +    +R    Q+   +A   L+      E   VD+V+EAV 
Sbjct: 325 VESDPKQLDAAKKIITFTLEKEASRAH--QNGQASAKPKLRFSSSTKELSTVDLVVEAVF 382

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+K+F+EL   C P   L TNTS ++++ +   T     +IG HFFSPAHVM LL
Sbjct: 383 EDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLL 442

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M++ K I K+ VVVGNC GF  NR   PY      L+  G    
Sbjct: 443 EVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPE 502

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVD 404
            +D  +  FG  +GPF++ DLAG  V          T        P R    S  SPL D
Sbjct: 503 DVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGD 562

Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           +L ++GR G+  GKG Y Y+K  G   KPDP +   + + R + +I    +  +++++EI
Sbjct: 563 MLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEEI 618

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           +E  L+ ++NE+ R+LEEG+  R   +D   + G  +P ++GG +F+A +VG   V   L
Sbjct: 619 LERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKL 678

Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP 548
           +K+ +   +    +PS +L     +G P
Sbjct: 679 QKYYRQNPDIPQLEPSDYLRRLVAQGSP 706


>gi|425301222|ref|ZP_18691115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           07798]
 gi|408212859|gb|EKI37364.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           07798]
          Length = 714

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M++  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MIITGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|365850548|ref|ZP_09391011.1| fatty oxidation complex, alpha subunit FadJ [Yokenella regensburgei
           ATCC 43003]
 gi|364567214|gb|EHM44886.1| fatty oxidation complex, alpha subunit FadJ [Yokenella regensburgei
           ATCC 43003]
          Length = 716

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 171/554 (30%), Positives = 274/554 (49%), Gaps = 23/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + + +  K GL+D VV +  LL+     A++      P  R L   +++ +  
Sbjct: 167 MILTGKQLRARQALKAGLVDEVVAASILLEA----AVERVKNGVPEHRRLPVRERVLAGP 222

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R VL   + +   +KT  N P     L VIE G+ HG  SG   EA+ F EL M   S
Sbjct: 223 LGRTVLFNLVGKKTEQKTLGNYPATTRILQVIETGLAHGISSGYEAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H+FFA     K P  +      R V  +     G   + +        + V +K++
Sbjct: 283 QSLRHIFFASTDLKKDPGASAESGPLRAVGILGGGLMGGGIAFVTACK--GKLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N+  +   +K     +   V R  +   + ++ L ++ G  DYS F   D+VIEAV E +
Sbjct: 341 NANGINHALKYSWDLLDKKVRRRHIRASERDSQLALISGTTDYSGFSHRDVVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQK+ +E+E+ C PH + A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 ALKQKMVTEVEQHCAPHTVFASNTSSLPIGDIAALAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS + I   + + K   K P+VV +  GF VNR   PY   A  L++ G  +  ID
Sbjct: 461 PHAGTSERTIATTVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAIRLLTEGQRIENID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
            A+  FG P+GP QLLD  G           ++A+ +R F+ P  ++D +L   R G+ N
Sbjct: 521 KALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEEAYGER-FRPPANVIDAILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            +G Y Y EKG  SK +PDP++  ++            G+     E+ + E  +  ++NE
Sbjct: 580 NRGFYLYGEKGRKSKKQPDPAIYALVGST---------GQKNEFNEQLMAERCVMLMLNE 630

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E +V  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  F
Sbjct: 631 AARCYDEQVVRSARDGDIGAVFGIGFPPFLGGPFHYMDTLGAREVVAILQRLAVQHGPRF 690

Query: 534 KPSRFLEERATKGI 547
            P   L +RA +G+
Sbjct: 691 TPCESLLQRAEQGL 704


>gi|433005796|ref|ZP_20194224.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE227]
 gi|433154460|ref|ZP_20339401.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE176]
 gi|431513494|gb|ELH91576.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE227]
 gi|431673702|gb|ELJ39893.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE176]
          Length = 714

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAIHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|402700675|ref|ZP_10848654.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Pseudomonas fragi A22]
          Length = 703

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 274/554 (49%), Gaps = 19/554 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 59
           M+L  + + +    + GL+D +  S E LL  +  WA ++ A + P   S    D    L
Sbjct: 154 MILYGRPVNARHALQAGLLDRLAQSPETLLAEASEWAHELLAAQAPAQPSPPWPDPASEL 213

Query: 60  SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
                  +  R   K      P  Q  L  +E         G+  EA +F++L     S 
Sbjct: 214 PA--HYFQQYRSANKHRWQGQPAPQQALAALEAACNLPLAEGLAFEAGLFQQLEGSSQSE 271

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 179
            L HV  A+      P V ++    R V +VA+IG G MG GIA       I V L E+ 
Sbjct: 272 ALRHVHAAEGDLGTQPGV-NLQTPIRPVHRVAIIGAGTMGGGIAMCFANAGIPVALLELK 330

Query: 180 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 239
           +E L  G++ I  N +  V RGKLT+ +    +++L G LDY+E  D D+VIEAV ES+ 
Sbjct: 331 AEALDHGLRQIRTNYQTGVKRGKLTEAQLEQRMELLHGTLDYAEISDADLVIEAVFESLA 390

Query: 240 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 299
           +KQ++F  L++ C P  ILA+NTST+D++ +   T     +IG HFFSPA+VM LLE+VR
Sbjct: 391 IKQQVFRTLDEVCKPGAILASNTSTLDVDAIAAVTRRPQDVIGLHFFSPANVMRLLEVVR 450

Query: 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 359
            + T+A  +   +++   I K+PVV G C GF  NR   PYS+ A  L+  G  V +ID 
Sbjct: 451 GQATAADTLATTLSIAARIGKIPVVSGVCFGFIGNRMLEPYSREAHRLLLEGATVAQIDK 510

Query: 360 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKG 419
            +   GL +G   + DLAG  V+    +   +          + D L   G  G+    G
Sbjct: 511 VLTDLGLAMGVLAMHDLAGIDVSYLIREARREQIRQDPGYCKIADALYDLGHYGQKTASG 570

Query: 420 LYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS---VTEKEIVEMILFPVVNESCR 476
            Y Y+ G +P  +P       E   L+  +  G  I+   ++ +EI +  +F ++NE   
Sbjct: 571 FYLYQ-GREPVENP-------ELTALAENIAWGLGITRRVISNQEIHDRCMFMLINEGIA 622

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF---- 532
           +L+EGI  R+ D+D   + G  FP++RGG + +A  +G + V   ++ + Q  G +    
Sbjct: 623 LLDEGIAQRSGDIDLVWINGYGFPAWRGGPLHYARTLGLDVVLEGIRHYRQSLGAYGQMW 682

Query: 533 FKPSRFLEERATKG 546
           F+P+  LE     G
Sbjct: 683 FQPAPLLERLVAAG 696


>gi|260430008|ref|ZP_05783983.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
 gi|260418931|gb|EEX12186.1| peroxisomal bifunctional enzyme [Citreicella sp. SE45]
          Length = 697

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 154/430 (35%), Positives = 226/430 (52%), Gaps = 7/430 (1%)

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E  VF+ L + D +  L ++FFA+R    V  + D+    R V    VIGGG MG GI  
Sbjct: 258 ERAVFQRLRLSDDAFALRYLFFAERKAGSVDGL-DM-TAARRVSAAGVIGGGTMGQGIVR 315

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
           A +   + VVL E +   L   +  I+A++R  V RG+L+   A      L G +DY   
Sbjct: 316 ALLAAGLSVVLIERDEAALPTALSAIDASLRAQVARGRLSASGAEQRRAALSGAVDYGAL 375

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
              D+VIEAV E + +KQ + + LE A P   I+ATNTS +D++ + +  S  +R++G H
Sbjct: 376 SGCDLVIEAVFEDMSVKQDVLARLEAALPAEAIIATNTSYLDIDEMVQGLSHPERVLGLH 435

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSA 344
           FFSPA VM LLE+VR  RTS  V+   + +   + K PVV     GF  NR +  Y + A
Sbjct: 436 FFSPADVMKLLEVVRAARTSDAVLASGLKLAGKLGKQPVVARVGEGFVGNRIYAAYRRRA 495

Query: 345 RLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVD 404
            LLV  G     +D+A   FG  +GPF + D++G  +A A  K    +   ++    + D
Sbjct: 496 ELLVLDGAAPEEVDTAATGFGFAMGPFAVSDMSGLDIAWAMRKRQAASRDPQARYVTIPD 555

Query: 405 LLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 464
            L ++GR G+  GKG Y Y  G+  +PDP V  +I+  R  + +     P S     I  
Sbjct: 556 RLCEAGRLGRKTGKGWYAYGSGAA-EPDPEVAALIDAARAEAGV----SPQSFDAGTIQR 610

Query: 465 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 524
            +L  +VNE+  +L+EGI  RASD+D A   G  FP +RGG ++WA   G   +   LK 
Sbjct: 611 QLLAAIVNEAACLLDEGIAQRASDVDVALANGYGFPRWRGGPLYWAATEGRAGLEADLKA 670

Query: 525 WSQLYGNFFK 534
            +   G+ F+
Sbjct: 671 LAAAVGHGFR 680


>gi|170720838|ref|YP_001748526.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida W619]
 gi|254788571|sp|B1J5A5.1|FADB_PSEPW RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|169758841|gb|ACA72157.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas putida
           W619]
          Length = 715

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 278/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|432661576|ref|ZP_19897220.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE111]
 gi|431199313|gb|ELE98066.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE111]
          Length = 714

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|377808341|ref|YP_004979533.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia sp. YI23]
 gi|357939538|gb|AET93095.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
           [Burkholderia sp. YI23]
          Length = 708

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 177/552 (32%), Positives = 280/552 (50%), Gaps = 18/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAV-----VTSEELLKVSRLWALDIAARRKPWIRSLHRTDK 55
           +ML  + + ++E  +LGL+D V     V +E L     L A   A RR    R L   D 
Sbjct: 159 LMLSGRHVGAQEALRLGLVDRVGQSDDVFNEGLAYAHELIATQAAPRRTKNARGLADEDA 218

Query: 56  LGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
             +          AR + +K +  +      +D +E  +      G+  E + F E    
Sbjct: 219 SVAAI------AAARAETQKKSRGLLSPLKIVDCVEAALNLPFDEGLRFERERFLECRES 272

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
               GLVH FFA+R T K P   D   K R +R V V+GGG MG+GIA A +   + V +
Sbjct: 273 PQRAGLVHAFFAERETQKSPETRDA--KAREIRAVGVVGGGTMGAGIAVALLDAGLAVTM 330

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E +   L +G   +E     L+ + ++T +    AL+ L G   Y    D D+VIEAV 
Sbjct: 331 IERDDASLERGRAHVEKVYDALIAKERITPETKTRALQRLNGATHYDALADADLVIEAVF 390

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + +KQ +F+EL++ C P  +LATNTS +D++ +    S    ++G HFFSPA++M LL
Sbjct: 391 EDMAVKQAVFAELDRVCKPGAVLATNTSYLDIDEIAVSISRPQDVLGLHFFSPANIMKLL 450

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E+V  +R +A V+     + K ++KV V  G C GF  NR    Y  +A  L+  G   +
Sbjct: 451 EVVVPKRVAADVVATGFELAKKLRKVAVRAGVCDGFIGNRMLAVYRAAADHLMEDGASPY 510

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
           +ID+A+R FG P+GP+Q++DLAG  +  A  K         +    + D L + G  G+ 
Sbjct: 511 QIDAAVRDFGFPMGPYQVIDLAGGDIGWAARKRRAATRDPNARYVRIGDELCERGWFGQK 570

Query: 416 NGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
           +G+G Y YE G++  KPD  V  II+  R  + +     P + ++ EIV   +  ++NE 
Sbjct: 571 SGRGYYRYENGARSGKPDAEVEAIIDTERARAGVT----PRTFSDDEIVRRYMAAMINEG 626

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
             ++ EGI  R  D+D   V G  FP +RGG + +AD++G   V   ++ +++    F++
Sbjct: 627 ANIVHEGIAQRPLDVDATLVHGFGFPRHRGGPMHYADSIGLANVLDDIRAFAKEDPLFWR 686

Query: 535 PSRFLEERATKG 546
            S  + +   +G
Sbjct: 687 ASPLIVDLVARG 698


>gi|432602939|ref|ZP_19839183.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE66]
 gi|431141513|gb|ELE43278.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE66]
          Length = 714

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 277/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG K K   DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+E ++    D D  +V G+ FP + GG   + D++ A  V   +++ +  YG+ F
Sbjct: 630 AVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLDAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E + +G
Sbjct: 690 TPCERLVEMSKRG 702


>gi|404401650|ref|ZP_10993234.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas fuscovaginae UPB0736]
          Length = 715

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 175/558 (31%), Positives = 280/558 (50%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLK-----VSRLWA--LDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+L +     V R  +  +D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEQLQQAALDLVKRAISGEIDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       +LA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAVLASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S Q +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEQAVATTVAYAKKMGKNPIVVNDCPGFLVNRILFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + K     DPSVL    PII E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKQKKVADPSVLEVLKPIIYEQRE------------VTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVDTAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKTG 710


>gi|331653785|ref|ZP_08354786.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M718]
 gi|331048634|gb|EGI20710.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli M718]
          Length = 730

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 183 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 238

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 239 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 298

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 299 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 356

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 357 NPQGINHALKYSWDQLDGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 416

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 417 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 476

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 477 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 536

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 537 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 595

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 596 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 643

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 644 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 703

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 704 RFTPCERLVEMGARG 718


>gi|77460100|ref|YP_349607.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas fluorescens Pf0-1]
 gi|118572964|sp|Q3K9D8.1|FADB_PSEPF RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|77384103|gb|ABA75616.1| fatty oxidation complex alpha subunit [Pseudomonas fluorescens
           Pf0-1]
          Length = 715

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 276/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    +L ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKL----RLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   I   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|430003991|emb|CCF19782.1| Peroxisomal bifunctional enzyme [Includes: Enoyl-CoA
           hydratase/3,2-trans-enoyl-CoA isomerase ;
           3-hydroxyacyl-CoA dehydrogenase] [Rhizobium sp.]
          Length = 646

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 171/495 (34%), Positives = 256/495 (51%), Gaps = 21/495 (4%)

Query: 16  LGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 75
           LGL+DAVV  + L   +  +A     R  P   S    +  G     R+   +++    +
Sbjct: 166 LGLVDAVVMGD-LRSEAVAFARAALGRPLPLPLSRRPVETPGPGFWERQEKAISKRARGE 224

Query: 76  TAPNMPQHQACLDVIEEGIVHGGYSGVLK-EAKVFKELVMLDTSRGLVHVFFAQRATSKV 134
            AP   +  ACL       V   +S  +  E   F EL   + +  L HVFFA+RA  + 
Sbjct: 225 AAPL--RALACL----RKAVEADFSDAMAFERATFLELRSSEQAAALRHVFFAERAAGRP 278

Query: 135 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 194
            ++     +P  +R   V+GGG MG+GIA A +   + VVL E + E + +G+  I    
Sbjct: 279 SHLA--AAEPLPIRLAGVVGGGTMGAGIAVALLDAGLPVVLVERDGEAVERGLANIRNVY 336

Query: 195 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 254
            G V RG++T D A   L ++ G  DY+   D D+VIEAV E + +K+ +F+EL + C P
Sbjct: 337 DGAVKRGRMTPDTAAERLSVVTGKTDYAALADADLVIEAVFEEIGVKRAVFAELGRICRP 396

Query: 255 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 314
             +LATNTS +D  ++ E   + +R IG HFFSPA+VM LLEIV    T+  V+     +
Sbjct: 397 EAVLATNTSYLDPRLIAEGLPNPERFIGLHFFSPANVMKLLEIVPVPETAPAVVATGFAL 456

Query: 315 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 374
           G+++ K+PV  G C GF  NR    Y  SA  LV  GV +  ID A+R++G  +GPF+  
Sbjct: 457 GRMLGKIPVQAGICEGFIGNRILKRYRASAEALVRQGVAIDAIDGAMRAYGFAMGPFEAQ 516

Query: 375 DLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDP 433
           DL G  +A    +    A  D      L D+L+++GR G+  G G Y Y  G + P+P  
Sbjct: 517 DLGGLDIAFLQREGARAAGQD--VPETLGDILVRAGRKGQKTGGGWYDYALGDRTPQPST 574

Query: 434 SVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDAS 493
           +V  +      LS+ + G   +SV   EI E ++  +  E   +L EG+  +ASD+D   
Sbjct: 575 AVAEL------LSSQISGEADMSVV--EIAESLVGEMAEEGAAILSEGVARQASDIDVVE 626

Query: 494 VLGMSFPSYRGGIVF 508
           + G  FP +RGG +F
Sbjct: 627 IHGYGFPRWRGGPMF 641


>gi|383814481|ref|ZP_09969901.1| multifunctional fatty acid oxidation complex subunit alpha
           [Serratia sp. M24T3]
 gi|383296558|gb|EIC84872.1| multifunctional fatty acid oxidation complex subunit alpha
           [Serratia sp. M24T3]
          Length = 721

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 179/558 (32%), Positives = 282/558 (50%), Gaps = 28/558 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  +S+ +++  ++GL+D VV    LL+     A++   +     R L   D +    
Sbjct: 181 LMLTGRSLRAKQARRMGLVDDVVPQSILLQT----AVERVRKGHQAERGLSYKDSIMQGP 236

Query: 61  EAREVL-KLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R VL  L R Q + K+  + P  +  +DV+  G+  G  +G   EAK F ELVM   S
Sbjct: 237 LGRAVLFHLVRKQTRAKSKGHYPATEKIIDVVHIGLTQGSGNGYAAEAKAFGELVMTPES 296

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIATAHILN-NIYVVL 175
             L  +FFA  A  K     D G +  P  + KVAV+GGGLMG GIA   I    + V +
Sbjct: 297 AALRSIFFATTALKK-----DFGAEAEPLTINKVAVLGGGLMGGGIAGVTITKAGLPVRI 351

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++N + +   +K     ++    RG L + +    + +L G  DYS F   D+VIEAV 
Sbjct: 352 KDINQQGISHSLKYSWDLLQKKARRGYLKRAELQRQMMLLSGTTDYSGFNQTDLVIEAVF 411

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++  E+E+    H I A+NTS++ ++ +    +  +++IG H+FSP   MPL+
Sbjct: 412 EDLELKQRMIREVEENAAQHTIFASNTSSLPIHEIASTAARPEQVIGLHYFSPVDKMPLV 471

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EI+   +TSAQ I   +   +   K  +VVG+  GF VNR   PY   A   +  G  + 
Sbjct: 472 EIIPHAKTSAQTIATTVAFARKQGKTAIVVGDSAGFYVNRILAPYINEATRCLIEGETIE 531

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKA 415
            ID ++  FG P+GP QLLD  G  V          AF +R      +D +++  R G+ 
Sbjct: 532 HIDKSLMDFGFPVGPLQLLDEVGIDVGTKIIPILAAAFGERFAAPKELDAIIRDDRKGRK 591

Query: 416 NGKGLYTYE----KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           N +G Y Y     K S  +PDPS+  ++       N+ P  K    T ++I +  +  ++
Sbjct: 592 NSRGFYLYNSKGRKESNKQPDPSIYGLL-------NVTPKNKQ---TSQQIADRCVALML 641

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L++G +    D D  +V G+ FP + GG + + D++GA+ +  +L+   Q +G 
Sbjct: 642 NEALRCLDDGTIHSPRDADIGAVFGIGFPPFLGGPMRYIDSLGADRLLKNLQALQQQFGE 701

Query: 532 FFKPSRFLEERATKGIPL 549
            F P + L  RA  G  L
Sbjct: 702 RFAPCQGLVSRAENGQKL 719


>gi|442592050|ref|ZP_21010030.1| Enoyl-CoA hydratase [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
 gi|441608203|emb|CCP99056.1| Enoyl-CoA hydratase [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
          Length = 714

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 277/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K  +VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTSIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|421522128|ref|ZP_15968774.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida LS46]
 gi|402754127|gb|EJX14615.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida LS46]
          Length = 715

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|417163609|ref|ZP_11998797.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0741]
 gi|386172834|gb|EIH44848.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           99.0741]
          Length = 713

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 180/556 (32%), Positives = 285/556 (51%), Gaps = 30/556 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA     K P        P  +  V ++GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTEVKKDPGSD---APPALLNSVGILGGGLMGGGIAYVTACKAGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E+
Sbjct: 340 INPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEN 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI
Sbjct: 400 LELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEI 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  I
Sbjct: 460 IPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ 
Sbjct: 520 DAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRK 578

Query: 416 NGKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           NG+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  +
Sbjct: 579 NGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLM 626

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG
Sbjct: 627 LNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYG 686

Query: 531 NFFKPSRFLEERATKG 546
           + F P   L E   +G
Sbjct: 687 SRFTPCERLVEMGARG 702


>gi|426410422|ref|YP_007030521.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas sp. UW4]
 gi|426268639|gb|AFY20716.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas sp. UW4]
          Length = 715

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAICGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDQVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKPIVFEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|425075588|ref|ZP_18478691.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW1]
 gi|425086224|ref|ZP_18489317.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW3]
 gi|449060359|ref|ZP_21738019.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae hvKP1]
 gi|405593988|gb|EKB67411.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW1]
 gi|405605139|gb|EKB78205.1| fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae WGLW3]
 gi|448873926|gb|EMB08993.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae hvKP1]
          Length = 714

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 179/554 (32%), Positives = 281/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P   + G  P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 690 FTPCDTLLRMAEQG 703


>gi|427805477|ref|ZP_18972544.1| putative enzyme [Escherichia coli chi7122]
 gi|427810037|ref|ZP_18977102.1| putative enzyme [Escherichia coli]
 gi|443618415|ref|YP_007382271.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli APEC O78]
 gi|412963659|emb|CCK47584.1| putative enzyme [Escherichia coli chi7122]
 gi|412970216|emb|CCJ44860.1| putative enzyme [Escherichia coli]
 gi|443422923|gb|AGC87827.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli APEC O78]
          Length = 714

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|386013039|ref|YP_005931316.1| FadB_3 [Pseudomonas putida BIRD-1]
 gi|313499745|gb|ADR61111.1| FadB_3 [Pseudomonas putida BIRD-1]
          Length = 715

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|432627994|ref|ZP_19863970.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE77]
 gi|431162605|gb|ELE63046.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE77]
          Length = 714

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 277/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG  +GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFQVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E   +G
Sbjct: 690 TPCERLVEMGARG 702


>gi|332278508|ref|ZP_08390921.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella sp. D9]
 gi|332100860|gb|EGJ04206.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shigella sp. D9]
          Length = 714

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELEMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|167032684|ref|YP_001667915.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida GB-1]
 gi|189044409|sp|B0KH74.1|FADB_PSEPG RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|166859172|gb|ABY97579.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas putida
           GB-1]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|293415633|ref|ZP_06658276.1| fatty oxidation complex [Escherichia coli B185]
 gi|291433281|gb|EFF06260.1| fatty oxidation complex [Escherichia coli B185]
          Length = 714

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A +  P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDHPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|395444455|ref|YP_006384708.1| FadB 3 [Pseudomonas putida ND6]
 gi|388558452|gb|AFK67593.1| FadB 3 [Pseudomonas putida ND6]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|429334838|ref|ZP_19215489.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida CSV86]
 gi|428760508|gb|EKX82771.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida CSV86]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/558 (30%), Positives = 276/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEKLGEAALDLIKRAISGEFDHKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEAQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D SVL    P++ E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVADASVLEVLKPVVYEQR------------EVSDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         K++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADKYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|425898553|ref|ZP_18875144.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
 gi|397891431|gb|EJL07909.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 278/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+L       +K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D     + V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYD--EIAQDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K K     DPSVL    PI+ E R             VT+++IV  ++ 
Sbjct: 586 GKGFYAYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKNG 710


>gi|127513353|ref|YP_001094550.1| multifunctional fatty acid oxidation complex subunit alpha
           [Shewanella loihica PV-4]
 gi|171855247|sp|A3QFP3.1|FADJ_SHELP RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|126638648|gb|ABO24291.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Shewanella loihica PV-4]
          Length = 706

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 183/555 (32%), Positives = 285/555 (51%), Gaps = 27/555 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKLGS 58
           MML  K + +++  K+GL+D VV    LL+ +   AL   AR  +KP + ++ +   L  
Sbjct: 165 MMLTGKQLRAKQALKMGLVDDVVPESILLQTAIEMAL-AGARPAKKPKLSTVEKL--LEG 221

Query: 59  LSEAREVLKLARLQA--KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
               R ++    L+   KKT  N P  +  +D + +G+  G   G+  EA+ F +LV+ +
Sbjct: 222 TPVGRNIIFEQALKQVNKKTQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSN 281

Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVL 175
            S  L  +FFA     K     D+   P+ V KV V+GGGLMG GIA+       I V +
Sbjct: 282 ESEALRSIFFATTEMKKESGAGDV--SPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRV 339

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+++   L   +      +   V R  +T    +N + ++    +Y   KD DMV+EAV 
Sbjct: 340 KDISEIGLSNALAYAYKLLAKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVF 399

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK ++  ++E+ C  H I A+NTS++ +  + E     + +IG H+FSP   MPL+
Sbjct: 400 EDLNLKHQMVKDVERECGEHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLV 459

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++  ++TS Q I   +   +   K P+VV +  GF VNR    Y   A  L+  G  V 
Sbjct: 460 EVIAHDKTSPQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVD 519

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
            +D A+  FG P+GP  LLD  G  V A  S   +K   +R F++P   D LL   R G+
Sbjct: 520 HLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGER-FKAPAAFDKLLADDRKGR 578

Query: 415 ANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPG--GKPISVTEKEIVEMILFPVV 471
            NGKG Y Y   SK K  D SV  ++        + PG  G+PI++ E+ +V+M+     
Sbjct: 579 KNGKGFYQYGAKSKKKLVDESVYGVL-------GLTPGADGEPIALAERCVVQML----- 626

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R LEEGI+    D D  ++ G+ FP + GG   + D++GA ++  +LK++   +G+
Sbjct: 627 NEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQFGD 686

Query: 532 FFKPSRFLEERATKG 546
            F P   L E A  G
Sbjct: 687 RFAPCDRLVEMAESG 701


>gi|339486624|ref|YP_004701152.1| fatty acid oxidation complex subunit alpha [Pseudomonas putida S16]
 gi|338837467|gb|AEJ12272.1| fatty acid oxidation complex, alpha subunit [Pseudomonas putida
           S16]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/558 (30%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  +       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPQLLMAGALDLVKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEAQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVADATVLDVLKPIVFEQR------------EVTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|420031278|ref|ZP_14545100.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
 gi|397400591|gb|EJJ92232.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
          Length = 687

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 179/554 (32%), Positives = 280/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 140 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 195

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 196 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 255

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P   + G  P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 256 QALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 312

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 313 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 372

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 373 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 432

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 433 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 492

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 493 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRK 551

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +           +++ E  +  ++N
Sbjct: 552 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRLY---------AQQVAERCVMMMLN 602

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 603 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 662

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 663 FTPCDTLLRMAEQG 676


>gi|26988860|ref|NP_744285.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas putida KT2440]
 gi|81586273|sp|Q88L02.1|FADB_PSEPK RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|24983666|gb|AAN67749.1|AE016406_4 fatty oxidation complex, alpha subunit [Pseudomonas putida KT2440]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|378979951|ref|YP_005228092.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae HS11286]
 gi|419972673|ref|ZP_14488100.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
 gi|419977648|ref|ZP_14492947.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
 gi|419983236|ref|ZP_14498387.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
 gi|419989515|ref|ZP_14504491.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
 gi|419995553|ref|ZP_14510359.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
 gi|420001534|ref|ZP_14516189.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
 gi|420006561|ref|ZP_14521058.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
 gi|420012382|ref|ZP_14526696.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
 gi|420018001|ref|ZP_14532199.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
 gi|420023911|ref|ZP_14537926.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
 gi|420037127|ref|ZP_14550783.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
 gi|420041073|ref|ZP_14554571.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
 gi|420046835|ref|ZP_14560154.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
 gi|420052545|ref|ZP_14565726.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
 gi|420075319|ref|ZP_14587795.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
 gi|420083673|ref|ZP_14595950.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
 gi|421909639|ref|ZP_16339449.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
           ST258-K26BO]
 gi|421916972|ref|ZP_16346536.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
           ST258-K28BO]
 gi|424932422|ref|ZP_18350794.1| Fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae KpQ3]
 gi|428150563|ref|ZP_18998332.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Klebsiella pneumoniae
           subsp. pneumoniae ST512-K30BO]
 gi|428940462|ref|ZP_19013545.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae VA360]
 gi|364519362|gb|AEW62490.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae HS11286]
 gi|397350070|gb|EJJ43160.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
 gi|397353989|gb|EJJ47056.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
 gi|397355407|gb|EJJ48406.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
 gi|397367320|gb|EJJ59932.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
 gi|397369638|gb|EJJ62238.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
 gi|397371858|gb|EJJ64366.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
 gi|397382271|gb|EJJ74434.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
 gi|397386224|gb|EJJ78310.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
 gi|397390716|gb|EJJ82614.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
 gi|397400147|gb|EJJ91793.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
 gi|397405790|gb|EJJ97236.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
 gi|397418608|gb|EJK09766.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
 gi|397419391|gb|EJK10540.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
 gi|397425447|gb|EJK16326.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
 gi|397448412|gb|EJK38586.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
 gi|397451003|gb|EJK41096.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
 gi|407806609|gb|EKF77860.1| Fatty acid oxidation complex subunit alpha [Klebsiella pneumoniae
           subsp. pneumoniae KpQ3]
 gi|410116541|emb|CCM82074.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
           ST258-K26BO]
 gi|410120689|emb|CCM89161.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae
           ST258-K28BO]
 gi|426302261|gb|EKV64470.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae VA360]
 gi|427539428|emb|CCM94470.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Klebsiella pneumoniae
           subsp. pneumoniae ST512-K30BO]
          Length = 714

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 179/554 (32%), Positives = 280/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P   + G  P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +           +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRLY---------AQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 690 FTPCDTLLRMAEQG 703


>gi|397693373|ref|YP_006531253.1| Fatty acid oxidation complex subunit alpha [Pseudomonas putida
           DOT-T1E]
 gi|397330103|gb|AFO46462.1| Fatty acid oxidation complex subunit alpha [Pseudomonas putida
           DOT-T1E]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAIGGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|424924082|ref|ZP_18347443.1| FadB [Pseudomonas fluorescens R124]
 gi|404305242|gb|EJZ59204.1| FadB [Pseudomonas fluorescens R124]
          Length = 715

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+  +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   I   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTEKLREMAKNG 710


>gi|398872180|ref|ZP_10627483.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM74]
 gi|398204052|gb|EJM90863.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM74]
          Length = 715

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEQLQNAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   + K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYETDKRGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|389685142|ref|ZP_10176466.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
           O6]
 gi|388550795|gb|EIM14064.1| fatty oxidation complex, alpha subunit [Pseudomonas chlororaphis
           O6]
          Length = 715

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+L       +K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D       V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYD--EIAHDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K K     DPSVL    PI+ E R             VT+++IV  ++ 
Sbjct: 586 GKGFYAYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKNG 710


>gi|429121601|ref|ZP_19182220.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Cronobacter sakazakii
           680]
 gi|426323907|emb|CCK12957.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Cronobacter sakazakii
           680]
          Length = 717

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 181/554 (32%), Positives = 279/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K GL+D VV    LL+     A ++A +R+P  R L   ++L  G 
Sbjct: 167 MILAGKQLRPRQALKAGLVDDVVPQSILLEA----AAELAKKRRPAPRRLPVRERLLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           +  A     + +   +KT  N P  Q  +DV+  G+  G  SG   EA+ F EL M   S
Sbjct: 223 IGRALLFRMVTQKTHQKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPES 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
             L  +FFA   T+++   T     PR +  V V+GGGLMG GIA    I   + V +K+
Sbjct: 283 AALRGLFFA---TTELKKETGSEAAPRALHSVGVLGGGLMGGGIAYVTAIKARLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           ++ + +   +K     +   V R  L   + +  + ++    DY  F   D+V+EAV E 
Sbjct: 340 ISEKGINHALKYSWDLLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +E+E    PH I A+NTS++ +  +    +  +++IG H+FSP   MPL+E+
Sbjct: 400 LTLKQNMVAEIEAHTAPHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSA+ I   + + K   K P+VV +C GF VNR   PY   A   +  G  + +I
Sbjct: 460 IPHAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+   G P+GP QLLD  G  V        ++A+  R F +P   V  +L   R G+ 
Sbjct: 520 DEALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + SK + DP+V  +I        + PGGK   ++ +EI E  +  ++N
Sbjct: 579 NGRGFYLYPAKGRKSKKQVDPAVYGLI-------GVKPGGK---LSSEEIAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+EG+V  A D D  +V G+ FP + GG   + D +GA  V  +L + +  YG+ 
Sbjct: 629 EAARCLDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAAVVATLTRLATRYGDR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L   A  G
Sbjct: 689 FTPCDRLLRMAQTG 702


>gi|344282369|ref|XP_003412946.1| PREDICTED: peroxisomal bifunctional enzyme-like [Loxodonta
           africana]
          Length = 723

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 175/568 (30%), Positives = 284/568 (50%), Gaps = 41/568 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + + + E  KLG++D VV S   EE +K++ R+    + +RR   KP ++SL   D    
Sbjct: 156 RHVPAYEALKLGIVDEVVNSDPVEEAIKLAQRVLDQPLESRRLCNKP-VQSLPNMDA--- 211

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                 +   A L+ +K  P     + C+  ++  + +    G+ KE ++F  L     +
Sbjct: 212 ------IFNEALLKMRKQYPGCLSRETCVLGVQAAVCYPYEVGIKKEEELFMYLRESGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA++  +K    +    K    R +  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFFAEKVANKWSIPSGASWKTASARPISSVGVLGLGTMGKGIVISLARARIPVIG 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E + + L    K I + +    +  K+ QD    ++   +      E   VD+VIEAV 
Sbjct: 326 VESDKQQLETANKVINSFLEKEAS--KMQQDGHPWSIPKPRLTTSMKELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+K+F+EL   C P   L TNTS +D++ +         +IGAHFFSPA VM LL
Sbjct: 384 EEMSLKKKVFAELSAICKPETFLCTNTSALDIDKIASAADRPHLVIGAHFFSPAQVMTLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++  + TS   +  +M++ K +KK+ VVVGNC  F  NR   PY   +  L+  G    
Sbjct: 444 EVIPGKYTSPTTVATVMSLAKKMKKIGVVVGNCFAFVGNRMLAPYYNQSYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS-----------PLVD 404
            +D  +  FG  +GPF+  DL+G  V   + KE     P+   ++           P+ D
Sbjct: 504 EVDRVLEEFGFKMGPFRTSDLSGLDVGWRSRKEQGLTGPELPPRTPARKRGDVRYCPIPD 563

Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           +L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P +++++EI
Sbjct: 564 MLCELGRFGQKTGKGWYQYDKPLGRIYKPDPWLANFLSQYRETQHI----EPRTISQEEI 619

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           +E  L+ ++NE  R+L EGI  R   +D   + G ++P + GG +F+A  VG   V   L
Sbjct: 620 LERCLYSLINEGFRILGEGIAARPEHIDVIYLHGYAWPRHTGGPMFYASTVGLPIVLEKL 679

Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP 548
           +K+SQ   +    +PS +L++ A+ G P
Sbjct: 680 QKYSQQNPDIPQLEPSDYLKKLASLGNP 707


>gi|401678085|ref|ZP_10810055.1| multifunctional fatty acid oxidation complex subunit alpha
           [Enterobacter sp. SST3]
 gi|400214693|gb|EJO45609.1| multifunctional fatty acid oxidation complex subunit alpha
           [Enterobacter sp. SST3]
          Length = 715

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 184/554 (33%), Positives = 279/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R L   +++ +  
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQSILLEA----AVELALKGRQAKRPLPVRERVLAGP 222

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  LDVIE G+  G  SG   EAK F EL M   S
Sbjct: 223 LGRTLLFNMVGKKTEQKTKGNYPAAKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P        P  +R + V+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTEVKKDPGSE---ASPAPLRAIGVLGGGLMGGGIAFVTASKGKLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N + +   ++    N+   V R  +   + +  L M+ G  DYS F   D+VIEAV E 
Sbjct: 340 INPKGINHALQYSWQNLDQKVKRRHIKASERDKTLAMISGTTDYSGFAHRDLVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E+ C PH I A+NTS++ +  +  K +  +++IG HFFSP   MPL+E+
Sbjct: 400 LALKQQMVADVEQHCAPHTIFASNTSSLSIGDIAAKAARPEQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS Q I  ++ + K   K P+VV +  GF VNR   PY   A  L++ G  +  +
Sbjct: 460 IPHATTSPQTIATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHV 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+  FG P+GP QLLD  G           + A+ DR F  P  +V  +LK  R G+ 
Sbjct: 520 DEALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGDR-FSPPANIVSAILKDDRKGRK 578

Query: 416 NGKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y Y  KG  SK + DPSV  +I    +       GK  +V   E   M++   +N
Sbjct: 579 NERGFYLYGAKGRKSKKQVDPSVYGLISTTGQ-------GKLSAVQCAERCVMMM---LN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R   E ++  A D D  +V G+ FP + GG   + D +GA  V   L+  +  YG  
Sbjct: 629 EAARCFGEQVIKSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGEVVAILQHLASQYGPR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L + A +G
Sbjct: 689 FTPCDELLQMAERG 702


>gi|170767402|ref|ZP_02901855.1| fatty oxidation complex, alpha subunit FadJ [Escherichia albertii
           TW07627]
 gi|170123736|gb|EDS92667.1| fatty oxidation complex, alpha subunit FadJ [Escherichia albertii
           TW07627]
          Length = 714

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 175/555 (31%), Positives = 281/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKSGLVDDVVPHSILLEA----AVELAKQNRQASRTLPIRERVMAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +   +KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEQKTQGNYPATERILEVIETGLAQGVSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D+   P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNLFFASTEVKKDPG-SDVEPGPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NAQGINHALKYSWDQLDSKVRRRHLKASERDKQLALISGTTDYRGFSHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQK+ +E+E+ C  H I A+NTS++ ++ +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQKMVAEVEQNCASHTIFASNTSSLPISDIAAYATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHVGTSAQTIATTVKLAKKQGKTPIVVQDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           +  + +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEATYGER-FSAPANIVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y  KG  SK + DP++ P+I  +   RLS              +I E  +  ++
Sbjct: 580 GRGFYLYGPKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQIAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++  A D D  +V G+ FP + GG   + D +GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSARDGDIGAVFGIGFPPFLGGPFRYIDTLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L+E + +G
Sbjct: 688 RFTPCERLQEMSERG 702


>gi|307189793|gb|EFN74066.1| Trifunctional enzyme subunit alpha, mitochondrial [Camponotus
           floridanus]
          Length = 766

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 178/567 (31%), Positives = 284/567 (50%), Gaps = 36/567 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV--------TSEE-----LLKVSRLWALDIA-----AR 42
           M+L  K++T++   K GL+D VV        T EE     L + +   A D+A       
Sbjct: 202 MILTGKTVTADRAKKSGLVDIVVNRLGPGVGTPEENTMRYLEETAVKAAQDLANGKLKVE 261

Query: 43  RKPWIRSLHRTDKLGSLSEAR-EVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYS 100
           R P       T ++ S +  + ++   A+ Q  K    + P     L+V+  G+  G   
Sbjct: 262 RGPKSFVDKITQQVLSFNFVKDQIFGRAKAQVMKATGGLYPAPLKILEVVRTGLDKGPVV 321

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G   EAK F +L++    +GL  +FF Q A  K       G      +K+AVIG GLMG+
Sbjct: 322 GFEAEAKGFGQLLVTPECKGLTSLFFGQTACKK----NRFGSAKSAAKKIAVIGAGLMGA 377

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI    I     V++K+ N   L +GI  I+  +   V R +++  + +  L  L   L+
Sbjct: 378 GIVQVSIDKGYDVIMKDTNQSGLYRGIGQIQKGLDSAVKRKRISSVEKDKYLSHLDATLN 437

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y+ FKDVD+VIEAV E + +K K+  E+E   P HC++ATNTS I +  +   +S  D++
Sbjct: 438 YNSFKDVDVVIEAVFEDIGIKHKVLKEIESIVPQHCVIATNTSAIPITKIAAGSSRPDKV 497

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG H+FSP   M LLEI+  + TS + I   + VG    K+ + VG+  GF   R     
Sbjct: 498 IGMHYFSPVDKMQLLEIITHKGTSEETIRTAVDVGLKQGKIVITVGDGPGFYTTRILSAM 557

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
              A  L+  GVD  ++D   ++FG P+G   L D  G  V A  S + DKAF +R F+ 
Sbjct: 558 LSEAIRLMQEGVDPVQLDKLTKAFGFPVGAATLSDEVGIDVGAHISADLDKAFGER-FRG 616

Query: 401 PLVDLL---LKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPIS 456
             V++L   +K+G  G+ +GKG++ YE  SK +  +   L I+++      + P G   S
Sbjct: 617 GDVNILGDMVKAGFLGRKSGKGIFVYEADSKNREVNVGALDILKK----YTLEPKG---S 669

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
            ++++    ++   VNE+   L+E I+    + +  +V G+ FP + GG   W DA GA+
Sbjct: 670 TSDEDRQLRMVSRFVNEAVLCLQENILANPLEGNVGAVFGLGFPPFTGGPFRWVDAYGAH 729

Query: 517 YVYTSLKKWSQLYGNFFKPSRFLEERA 543
                ++++   YG  F+P + L + A
Sbjct: 730 RFVKKMEEFQSHYGESFRPCQLLLDMA 756


>gi|399004941|ref|ZP_10707543.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM17]
 gi|398128082|gb|EJM17480.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM17]
          Length = 715

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+L       +K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEKLHEAALATVKRAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D       V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYD--EIAHDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDQVKEGTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K K     DPSVL    PI+ E R             VT+++IV  ++ 
Sbjct: 586 GKGFYAYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIVNWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAQFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKNG 710


>gi|432490018|ref|ZP_19731891.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE213]
 gi|432543952|ref|ZP_19780795.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE236]
 gi|432549442|ref|ZP_19786210.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE237]
 gi|432622592|ref|ZP_19858623.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE76]
 gi|432719461|ref|ZP_19954430.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE9]
 gi|432840044|ref|ZP_20073511.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE140]
 gi|433203958|ref|ZP_20387732.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE95]
 gi|431020293|gb|ELD33649.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE213]
 gi|431074362|gb|ELD81926.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE236]
 gi|431079720|gb|ELD86674.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE237]
 gi|431159392|gb|ELE59949.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE76]
 gi|431263273|gb|ELF55262.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE9]
 gi|431388782|gb|ELG72504.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE140]
 gi|431720963|gb|ELJ84965.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE95]
          Length = 714

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K  +VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTAIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y +KG  SK + DP++ P+I            G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---LSAPQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+ F
Sbjct: 630 AVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689

Query: 534 KPSRFLEERATKG 546
            P   L E + +G
Sbjct: 690 TPCERLVEMSKRG 702


>gi|398962158|ref|ZP_10679145.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM30]
 gi|398151437|gb|EJM39986.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM30]
          Length = 715

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+  +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDFKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   I   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|336449981|ref|ZP_08620438.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
 gi|336283138|gb|EGN76345.1| fatty oxidation complex, alpha subunit FadJ [Idiomarina sp. A28L]
          Length = 709

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 195/554 (35%), Positives = 285/554 (51%), Gaps = 29/554 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  K + +++  K+GL D +V    LL+ +   AL    + K    +L      G LS
Sbjct: 169 LMLTGKQLRAKQALKMGLADEMVPQSILLEAAVEQALKGKRKAKKPKLNLFSKVLEGPLS 228

Query: 61  EAREVLKLARLQAKKTAP-NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 119
               + K AR QA+K A  N P     +D + +G+  G  +G+  EAK F EL M D S 
Sbjct: 229 SI--LYKKAREQAQKKAHGNYPAIDKIIDTVAQGMNKGMKAGLAYEAKQFGELAMSDVSY 286

Query: 120 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEV 178
            L ++FFA     K       G+KP  V+K  V+GGGLMG GIA   I    + V LK++
Sbjct: 287 QLRNIFFATTEIKKETGAD--GVKPEAVKKAGVLGGGLMGGGIAHVTISKAKVPVRLKDI 344

Query: 179 NSEYLLKGIKTIEANVRGL----VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           N E    GIK   A    L    V R  +   +    + ML G +DYS FKD D+VIEAV
Sbjct: 345 NQE----GIKNALAYHHKLLLPKVKRKIIRPTELQQQMLMLTGTVDYSGFKDTDIVIEAV 400

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++EK    H I ATNTS++ +  +  K +  +++IG H+FSP   MPL
Sbjct: 401 FEDLDLKQKMVADIEKNAAEHTIFATNTSSLPITQIAAKAARPEQVIGLHYFSPVEKMPL 460

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVD 353
            EI+  E TS + I   +   K   K PVVV +  GF VNR   PY +++ARLL++ G  
Sbjct: 461 AEIITHEGTSKETIATTVEFAKRQGKTPVVVKDGAGFYVNRILAPYMNEAARLLLA-GEP 519

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGRN 412
           +  +D     FG P+GP  LLD  G  VA   +     A  +R F++P   + LL  GR 
Sbjct: 520 IEVLDKTFVKFGFPVGPITLLDEVGIDVAGKVAPILTDALGER-FRAPNAFNKLLDDGRK 578

Query: 413 GKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+ + KG Y Y+   K K  D SV  +I        I P     S+   E++E  + P++
Sbjct: 579 GRKSKKGFYLYDGKKKGKHVDSSVYQVI-------GISPSA---SLAADEMIERCVLPML 628

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+   L++ I+    D D  ++ G+ FP +RGG   + D++G   V   L+ +++  G+
Sbjct: 629 NEAAWCLQDDIIRSPRDGDIGAIFGIGFPPFRGGPFRYMDSLGIANVVARLQHYAEKEGD 688

Query: 532 FFKPSRFLEERATK 545
            FKP   L E A +
Sbjct: 689 RFKPCDLLIEMAAE 702


>gi|110642544|ref|YP_670274.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 536]
 gi|123049009|sp|Q0TFA6.1|FADJ_ECOL5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|110344136|gb|ABG70373.1| putative fatty oxidation complex alpha subunit [Escherichia coli
           536]
          Length = 714

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/550 (31%), Positives = 279/550 (50%), Gaps = 29/550 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+   L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVCCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKP-SRFLE 540
            F P +RF+E
Sbjct: 688 RFTPCNRFVE 697


>gi|417286296|ref|ZP_12073585.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW07793]
 gi|386249755|gb|EII95924.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TW07793]
          Length = 714

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M++  K + +++  KLG++D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MIITGKQLRAKQAVKLGVVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|260786960|ref|XP_002588524.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
 gi|229273687|gb|EEN44535.1| hypothetical protein BRAFLDRAFT_220780 [Branchiostoma floridae]
          Length = 719

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 187/578 (32%), Positives = 294/578 (50%), Gaps = 45/578 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI------AARRKPW-IRSLHRT 53
           M+   +++++++    GL+D VV  ++LLK +  +A  +      A R   W +  + R 
Sbjct: 151 MVTSGQTLSAQQALTAGLLDKVV-PDDLLKKAVGFARSVDVQGLEARRVSSWTVPDVDRA 209

Query: 54  DKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 113
           + +  L  AR+ L      A      +   QA L   E        +G+ +EA++ + L 
Sbjct: 210 EDV--LDAARKTLVRRSRGAIAPLTGLQAIQASLLPFE--------TGMKREAELGRYLW 259

Query: 114 MLDTSRGLVHVFFAQRATSK--VP---NVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL 168
               +  L + FFA+RA  +  +P   NV    ++P  ++ V V+G G MG GI+ + + 
Sbjct: 260 TSWQAAALRYAFFAERAVKRWHIPRNKNVNYRTVEPMDIKSVGVLGAGTMGIGISISLLQ 319

Query: 169 NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 228
             + VVL EVN   L KG    +  ++   +  +L+  K       L+   DYS+ ++VD
Sbjct: 320 AGLKVVLTEVNKAQLDKGKSYCKFWLKKSNSNTELSGGKPQPM--QLRATTDYSQLREVD 377

Query: 229 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSP 288
           +VIEAV E + LK+K+F +L+    P  ILATNTS +D++ +   T   D++IG HFFSP
Sbjct: 378 LVIEAVFEDLALKKKVFRQLDAVTNPRTILATNTSGLDIDKIAAATQRPDKVIGTHFFSP 437

Query: 289 AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV 348
           A VM LLE +    TS + I   M +G  I KV V+VGNC GF  NR        A  L+
Sbjct: 438 AQVMRLLENIYGRHTSGETIATAMQLGATIGKVGVLVGNCPGFVGNRMKGLNFTEAMFLL 497

Query: 349 SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV-------AAATSKEFDKAFPDRSFQ-- 399
             G D   +D A+  FG  +GPF++ DLAG  V       A  T++     +    ++  
Sbjct: 498 EEGADPQDVDKALEEFGFAMGPFRVSDLAGGDVHWRRRIQAGLTTEHGPPPYTPVLYRQG 557

Query: 400 ---SPLVDLLLKSGRNGKANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPGGKPI 455
              SPL D+L   GR G+  G G Y Y+ GS+   PD  V  +I + R+      G +  
Sbjct: 558 NRYSPLADMLCMQGRFGQKTGAGWYRYKSGSRTALPDAEVHRLIHKHRQDH----GFQRR 613

Query: 456 SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWAD-AVG 514
           +++ +EIVE  LFP++NE  R+LEEG+     D+D   +LG  +P + GG +++AD  VG
Sbjct: 614 NISSQEIVERCLFPLINEGFRILEEGLAAGPQDIDVIFLLGFGWPRHTGGPMYYADKVVG 673

Query: 515 ANYVYTSLKKWSQLY--GNFFKPSRFLEERATKGIPLS 550
              +  SL+K+   +     + PS  L + A +G  LS
Sbjct: 674 LGNLLQSLEKYRAHHPRSAHWVPSSLLRKMAAQGTSLS 711


>gi|120554072|ref|YP_958423.1| multifunctional fatty acid oxidation complex subunit alpha
           [Marinobacter aquaeolei VT8]
 gi|120323921|gb|ABM18236.1| 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
           [Marinobacter aquaeolei VT8]
          Length = 715

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 167/551 (30%), Positives = 280/551 (50%), Gaps = 30/551 (5%)

Query: 10  SEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA 62
           ++   K G +DAVV +++L       +K      LD  ARR+     +    KL ++ E+
Sbjct: 176 ADAALKTGAVDAVVGADKLVEAAVAIIKQCNEGKLDHMARREEKKGKI----KLNAM-ES 230

Query: 63  REVLKLAR-LQAKKTAPNMPQHQACLDVIEEGIVHGGYS---GVLKEAKVFKELVMLDTS 118
               ++++   A K   N P   A ++ I+    H G +    +  EAK F ++   + +
Sbjct: 231 MMAFEISKAFVAGKAGKNYP---APVEAIKTMQKHAGMTRDKAIEVEAKGFAKMAKTNVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             LV +F   +A  K  +  +   +   V   AV+G G+MG G+A    L    +++K++
Sbjct: 288 ACLVGLFLNDQALKKKASAWE--KEASDVNLAAVLGAGIMGGGVAFQSALKGTPIIMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +  G+   +  +   V +GK+   +  + L  +   L+Y +FK+VD+V+EAV+E+ 
Sbjct: 346 NQDGIKLGLNEAKKLLSKRVAKGKMDAGQMGDVLNAITPTLNYGDFKNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K  +  E E A     IL +NTSTI +N++ +     +   G HFF+P H+MPL+E++
Sbjct: 406 KVKDAVLRETEDAVREDTILTSNTSTISINLLAKNLKRPENFCGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+TS + I   +   K + K P+VV +C GF VNR  FPY      LV  G D  +ID
Sbjct: 466 RGEKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFAALVRDGADFQKID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR---SFQSPLVDLLLKSGRNGKA 415
             +  FG P+GP  LLD+ G   A   ++   + FP+R    F+S  +D++ ++ R G+ 
Sbjct: 526 KVMEKFGWPMGPAYLLDVVGMDTAKHANEVMAEGFPERMKADFKSA-IDVMFENSRYGQK 584

Query: 416 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           N KG Y YE+  K KP   V    E  + +  ++ G K     E+EI+  ++ P+  E+ 
Sbjct: 585 NDKGFYKYEEDKKGKPKKVVDE--ETYKLIEPVVDGSKDFD--EEEIIARMMIPLCLETV 640

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R LE+ IV   +D D   + G+ FP +RGG + + D +G +       K++ L G  + P
Sbjct: 641 RCLEDNIVEDPADADMGLIYGIGFPPFRGGALRYIDDMGVDKFVELADKYADL-GPLYAP 699

Query: 536 SRFLEERATKG 546
           +  L E A  G
Sbjct: 700 TEKLREMAKTG 710


>gi|312973398|ref|ZP_07787570.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           1827-70]
 gi|310331993|gb|EFP99228.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           1827-70]
          Length = 714

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|31541815|ref|NP_076226.2| peroxisomal bifunctional enzyme [Mus musculus]
 gi|341940646|sp|Q9DBM2.4|ECHP_MOUSE RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
           Short=PBFE; Includes: RecName: Full=Enoyl-CoA
           hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|16877282|gb|AAH16899.1| Enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Mus musculus]
 gi|148665191|gb|EDK97607.1| enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
           [Mus musculus]
          Length = 718

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/561 (30%), Positives = 276/561 (49%), Gaps = 30/561 (5%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + I+++E  KLG++D VV S+ + +  +     I    +P  R L++   + SL     V
Sbjct: 154 RHISTDEALKLGILDVVVKSDPVEEAIKFAQTVIGKPIEPR-RILNKP--VPSLPNMDSV 210

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
              A  + +K  P     + C+  ++  + H     + +EAK+F  L     +R L + F
Sbjct: 211 FAEAIAKVRKQYPGRLAPETCVRSVQASVKHPYEVAIKEEAKLFMYLRGSGQARALQYAF 270

Query: 126 FAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           FA+++ +K    +    K    + V  V V+G G MG GIA +     I VV  E + + 
Sbjct: 271 FAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGIPVVAVESDPKQ 330

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L    K I + +    ++      K N     L+      E   VD+VIEAV E + LK+
Sbjct: 331 LDTAKKIITSTLEKEASKSGQASAKPN-----LRFSSSTKELSSVDLVIEAVFEDMNLKK 385

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
           K+F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAH+M LLE++ +  
Sbjct: 386 KVFAELSALCKPGAFLCTNTSALDVDDIASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRY 445

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           +S   I  +M++ K I K+ VVVGNC GF  NR   PY      L+  G     +D  + 
Sbjct: 446 SSPTTIATVMSLSKRIGKIGVVVGNCYGFVGNRMLAPYYNQGYFLIEEGSKPEDVDGVLE 505

Query: 363 SFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVDLLLKSGR 411
            FG  +GPF++ DLAG  V          T        P R    +  SP+ D+L ++GR
Sbjct: 506 EFGFRMGPFRVSDLAGLDVGWKVRKGQGLTGPSLPPGTPTRKRGNTRYSPIADMLCEAGR 565

Query: 412 NGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
            G+  GKG Y Y+K  G   KPDP +   + + R   +I    K  S++++EI+E  L+ 
Sbjct: 566 FGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETHHI----KQRSISKEEILERCLYS 621

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE+ R+LEEG+      +D   + G  +P + GG +++A +VG   V   L+K+ +  
Sbjct: 622 LINEAFRILEEGMAASPEHIDVIYLHGYGWPRHVGGPMYYAASVGLPTVLEKLQKYYRQN 681

Query: 530 GNF--FKPSRFLEERATKGIP 548
            +    +PS +L     +G P
Sbjct: 682 PDIPQLEPSDYLRRLVAQGSP 702


>gi|170019351|ref|YP_001724305.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli ATCC 8739]
 gi|189044422|sp|B1IXA5.1|FADJ_ECOLC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|169754279|gb|ACA76978.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
           ATCC 8739]
          Length = 714

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|432370583|ref|ZP_19613669.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE10]
 gi|430884795|gb|ELC07730.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE10]
          Length = 714

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|188496359|ref|ZP_03003629.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           53638]
 gi|188491558|gb|EDU66661.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           53638]
          Length = 714

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGKRVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|398846065|ref|ZP_10603066.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM84]
 gi|398252934|gb|EJN38090.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM84]
          Length = 715

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKSG 710


>gi|386614955|ref|YP_006134621.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           UMNK88]
 gi|332344124|gb|AEE57458.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           UMNK88]
          Length = 714

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|301759735|ref|XP_002915716.1| PREDICTED: peroxisomal bifunctional enzyme-like [Ailuropoda
           melanoleuca]
          Length = 723

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 185/584 (31%), Positives = 289/584 (49%), Gaps = 52/584 (8%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D +V S   EE +K++ R+    + +RR   KP I+SL   D +  
Sbjct: 156 RHILADEALKLGILDEIVNSDPVEEAIKLAERISDQPLESRRLCNKP-IQSLPNMDSI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ +K  P     + C+  ++  + +    G+ KE ++F  L     +
Sbjct: 213 FSEAF-------LKMRKQHPGCLSQETCVRAVQAAVQYPYEVGLKKEEELFMYLQKSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L +VFFA+R  SK    +    K      +  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYVFFAERNVSKWSTPSGASWKTAVAHHISSVGVVGLGTMGRGIVISLAKAKIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--EFKDVDMVIEA 233
            E +     K ++  E  +  L+ +       +++     K  L  S  E   VD+VIEA
Sbjct: 326 VESDK----KQLEVAEKIISSLLEKEASKMQHSSHPWLGPKPRLTTSMKELGGVDLVIEA 381

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM 
Sbjct: 382 VFEEINLKKQVFAELSAVCKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMK 441

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLEI+  + +S   I  +M + K IKK+ VVVGNC GF  NR    Y      L+  G  
Sbjct: 442 LLEIIPGQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLKAYYNQTYFLLEEGSK 501

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDRSFQS----PL 402
              +D  +  FGL +GPF++ DLAG  +          T  +     P R   +    P+
Sbjct: 502 PEGVDQVLEEFGLKMGPFRVSDLAGLDIGWKSRQGQGLTGPKLPSGTPARKRGNRRYCPI 561

Query: 403 VDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
            D+L +SGR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P  +++ 
Sbjct: 562 PDMLCESGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETYHI----EPRIISQD 617

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EI+E  L+ ++NE+ R+LEEG+      +D   + G  +P +RGG +F+A  VG   V  
Sbjct: 618 EILERCLYSLINEAFRILEEGMAAAPEHIDVIYLHGYGWPRHRGGPMFYASTVGLPTVLE 677

Query: 521 SLKKWSQLYGNF--FKPSRFLEERATKGIP-------LSAPVSS 555
            L+K+ +   +    +P  +L++ A+ G P       L+ P SS
Sbjct: 678 KLQKYYRQNPDIPQLEPCDYLKKLASLGNPPLKEWQSLAGPPSS 721


>gi|300817452|ref|ZP_07097669.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           107-1]
 gi|415879583|ref|ZP_11544827.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           79-10]
 gi|432806489|ref|ZP_20040417.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE91]
 gi|432935123|ref|ZP_20134560.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE184]
 gi|433194410|ref|ZP_20378399.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE90]
 gi|300530078|gb|EFK51140.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           107-1]
 gi|342926739|gb|EGU95461.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           79-10]
 gi|431354631|gb|ELG41357.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE91]
 gi|431453291|gb|ELH33701.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE184]
 gi|431715435|gb|ELJ79585.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE90]
          Length = 714

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P+ +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPS-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|262043383|ref|ZP_06016509.1| fatty oxidation complex [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039264|gb|EEW40409.1| fatty oxidation complex [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 714

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 282/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
           + L  +FFA     K P   + G  P  +R VAV+GGGLMG GIA        + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPG-AEAGPGP--LRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV E 
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +  + T  Q I  ++ + K   K+P+VV +  GF VNR   PY   A  L+  G  +  I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKMPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G+ 
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEGAFGER-FSPPANIIDAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y YE   + SK +PDP+V P++   R  S +         + +++ E  +  ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R  +E I+  A D D  +V G+ FP + GG   + + +GA  V   L++ +  +G  
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMNTIGAGEVAAILQRLAAQFGPR 689

Query: 533 FKPSRFLEERATKG 546
           F P   L   A +G
Sbjct: 690 FTPCDTLLRMAEQG 703


>gi|365108571|ref|ZP_09336430.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
           4_7_47CFAA]
 gi|363640465|gb|EHL79936.1| fatty acid oxidation complex subunit alpha [Citrobacter freundii
           4_7_47CFAA]
          Length = 715

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 277/552 (50%), Gaps = 24/552 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  K+GL+D VV    LL+     A+++A +     R+L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKVGLVDEVVPHSILLEA----AVELAKKDSSAHRTLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A      ++   +KT  N P  +  L+VIE G+  G  SG   EA  F EL M   S
Sbjct: 223 LGRALLFRMASKKTVQKTQGNYPATERILEVIETGLAQGSSSGYDAEASAFGELAMTSQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L H+FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRHIFFANTDVKKDPG-SDAKPGPLNSVGILGGGLMGGGIAYVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G +DY  F   D++IEAV E +
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKASERDKQLALISGTIDYRGFAHRDLIIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH I A+NTS++ ++ +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 SLKQRMVAEVEQNCAPHTIFASNTSSLPISDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS Q I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHATTSEQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVETID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y  KG K K   DP++  +I        +   G+   ++  ++ E  +  ++NE
Sbjct: 580 GRGFYLYGAKGRKSKKQVDPAIYTLI-------GVQGQGR---LSAAQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E IV  A D D  +V G+ FP + GG   + D++GA  V   L++ +  YG+ F
Sbjct: 630 AARCFDEKIVRSARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVAVLQRLTTQYGSRF 689

Query: 534 KPSRFLEERATK 545
            P   L + A +
Sbjct: 690 TPCEQLLQMAER 701


>gi|398876394|ref|ZP_10631551.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM67]
 gi|398204799|gb|EJM91595.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM67]
          Length = 715

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVV-------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV        + EL+K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVEPGKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K K     DPSVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKQKKVADPSVLEVLKPIVFEQRE------------VTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKTG 710


>gi|291400311|ref|XP_002716515.1| PREDICTED: enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
           dehydrogenase-like [Oryctolagus cuniculus]
          Length = 723

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 179/582 (30%), Positives = 288/582 (49%), Gaps = 48/582 (8%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I++ +  KLG++D VV S   EE +K + R+    + +RR   KP ++SL   D    
Sbjct: 156 RHISAGDAHKLGILDEVVNSDPTEEAIKFAQRVLGQPLESRRLCNKP-VQSLPNMDT--- 211

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                 +   A ++ +K  P     + C+  I+  + +    G+ +E ++F  L     +
Sbjct: 212 ------IFSDAFVKMRKQYPGCLAPETCVRAIQAAVKYPYTVGIKEEEELFMYLRESGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA++  +K    +    K    R +  V V+G G MG GIA +     I V+ 
Sbjct: 266 RALQYAFFAEKNANKWSTPSGASWKTASARPISSVGVLGLGTMGRGIAISFARAKIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E + + L    + I + +    +  K+ Q     ++   +      E   VD+V+EAV 
Sbjct: 326 VESDKKQLEAANRVITSILEKEAS--KMQQSGHPGSVPKPRLTSSLKELSGVDLVVEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EDMALKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHMVIGTHFFSPAHVMRLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKKV VVVGNC GF  NR   PY      L+  G    
Sbjct: 444 EVIPSKYSSPTTIATVMNLSKRIKKVGVVVGNCHGFVGNRMLRPYYDQTYFLLEDGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDRSFQS----PLVD 404
            ID  +  FG  +GPF++ DLAG  V          T        P R   +    P+ D
Sbjct: 504 EIDQVLEEFGFKMGPFRVSDLAGLDVGWRIRKGQGLTGPTLPPGTPARKRNNRRYCPIPD 563

Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           +L +SGR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P  ++++EI
Sbjct: 564 MLCESGRFGQKVGKGWYQYDKPLGRIHKPDPWLSNFLSQYRETYHI----EPRVISQEEI 619

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           +E  L+ ++NE+ R+L EG+      +D   + G  +P +RGG +F+A  VG   V   L
Sbjct: 620 LERSLYALINEAFRILGEGMAASPEHIDVIYLYGYGWPRHRGGPMFYASTVGLPKVLEKL 679

Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP-------LSAPVSS 555
           +K+ +   +    +PS +L++ A++G P       L+ P SS
Sbjct: 680 EKYYRQNPDIPQLEPSAYLKKLASQGNPPLREWQRLAGPPSS 721


>gi|398984439|ref|ZP_10690601.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM24]
 gi|399012111|ref|ZP_10714438.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM16]
 gi|398116410|gb|EJM06173.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM16]
 gi|398155667|gb|EJM44104.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM24]
          Length = 715

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+  +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDFKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNAIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKTG 710


>gi|422780740|ref|ZP_16833525.1| fatty oxidation complex [Escherichia coli TW10509]
 gi|323977458|gb|EGB72544.1| fatty oxidation complex [Escherichia coli TW10509]
          Length = 714

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 178/555 (32%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A   +   R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLE----SAVELAKHDRLSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +   +KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEQKTQGNYPATKRILEVIETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQK+ +E+E  C  H I A+NTS++ ++ +    S  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQKMVAEVEGNCATHTIFASNTSSLPISDIAAHASRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y  KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGPKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMMML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + DA+GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDALGAAEVVAIMQRLTARYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|398883773|ref|ZP_10638722.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM60]
 gi|398196157|gb|EJM83174.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM60]
          Length = 715

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVV-------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV        + EL+K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVEPGKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K K     DPSVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKQKKVADPSVLEVLKPIVFEQRE------------VTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKTG 710


>gi|387814548|ref|YP_005430034.1| Fatty acid oxidation complex subunit alpha [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
 gi|302608168|emb|CBW44433.1| Fatty oxidation complex subunit alpha [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
 gi|381339564|emb|CCG95611.1| Fatty acid oxidation complex subunit alpha [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
          Length = 715

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 167/551 (30%), Positives = 279/551 (50%), Gaps = 30/551 (5%)

Query: 10  SEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA 62
           ++   K G +DAVV +++L       +K      LD  ARR+     +    KL ++ E+
Sbjct: 176 ADAALKTGAVDAVVGADKLVEAAVAIIKQCNEGKLDHMARREEKKGKI----KLNAM-ES 230

Query: 63  REVLKLAR-LQAKKTAPNMPQHQACLDVIEEGIVHGGYS---GVLKEAKVFKELVMLDTS 118
               ++++   A K   N P   A ++ I+    H G +    +  EAK F ++   + +
Sbjct: 231 MMAFEISKAFVAGKAGKNYP---APVEAIKTMQKHAGMTRDKAIEVEAKGFAKMAKTNVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             LV +F   +A  K  +  +   +   V   AV+G G+MG G+A    L    +++K++
Sbjct: 288 ACLVGLFLNDQALKKKASAWE--KEASDVNLAAVLGAGIMGGGVAFQSALKGTPIIMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +  G+   +  +   V +GK+   +  + L  +   L+Y +FK+VD+V+EAV+E+ 
Sbjct: 346 NQDGIKLGLNEAKKLLSKRVAKGKMDAGQMGDVLNAITPTLNYGDFKNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K  +  E E A     IL +NTSTI +N++ +     +   G HFF+P H+MPL+E++
Sbjct: 406 KVKDAVLRETEDAVREDTILTSNTSTISINLLAKNLKRPENFCGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+TS + I   +   K + K P+VV +C GF VNR  FPY      LV  G D  +ID
Sbjct: 466 RGEKTSDRAIATTVAYAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFAALVRDGADFQKID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR---SFQSPLVDLLLKSGRNGKA 415
             +  FG P+GP  LLD+ G   A   ++     FP+R    F+S  +D++ ++ R G+ 
Sbjct: 526 KVMEKFGWPMGPAYLLDVVGMDTAKHANEVMADGFPERMKADFKSA-IDVMFENNRYGQK 584

Query: 416 NGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
           N KG Y YE+  K KP   V    E  + +  ++ G K     E+EI+  ++ P+  E+ 
Sbjct: 585 NDKGFYKYEEDKKGKPKKVVDE--ETYKLIEPVVDGSKDFD--EEEIIARMMIPLCLETV 640

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R LE+ IV   +D D   + G+ FP +RGG + + D +G +       K++ L G  + P
Sbjct: 641 RCLEDNIVEDPADADMGLIYGIGFPPFRGGALRYIDDMGVDKFVELADKYADL-GPLYAP 699

Query: 536 SRFLEERATKG 546
           +  L E A  G
Sbjct: 700 TEKLREMAKTG 710


>gi|419317643|ref|ZP_13859445.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12A]
 gi|378168336|gb|EHX29240.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12A]
          Length = 709

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 162 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 217

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 218 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 277

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 278 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 335

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 336 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 395

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 396 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 455

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 456 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 515

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 516 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 574

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 575 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 622

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 623 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 682

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 683 RFTPCERLVEMGARG 697


>gi|119826|sp|P28793.1|FADB_PSEFR RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|51248014|pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form I (Native2)
 gi|51248015|pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form I (Native2)
 gi|51248018|pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form Ii (Native4)
 gi|51248019|pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form Ii (Native4)
 gi|51248022|pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form I (Native3)
 gi|51248023|pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form I (Native3)
 gi|90109186|pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form V
 gi|90109187|pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
           Pseudomonas Fragi, Form V
 gi|391839|dbj|BAA01227.1| alpha-subunit of HDT [Pseudomonas fragi]
          Length = 715

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 280/558 (50%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+  +DAVVT++       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     S
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSAS 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   K   V D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 NCLIGLFLNDQELKKKAKVYDKIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K K     D SVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYEADKKGKQKKLVDSSVLEVLKPIVYEQR------------DVTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKNG 710


>gi|419866590|ref|ZP_14388946.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O103:H25 str. CVM9340]
 gi|388334501|gb|EIL01089.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O103:H25 str. CVM9340]
          Length = 714

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|351709605|gb|EHB12524.1| Peroxisomal bifunctional enzyme [Heterocephalus glaber]
          Length = 714

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 176/575 (30%), Positives = 277/575 (48%), Gaps = 33/575 (5%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + I + E  KLG++D V+ S+ L +  +     +    +P  R L+R   + SLS     
Sbjct: 146 RYILAGEALKLGILDEVMKSDSLEEAIKFTQKILDQPLEPR-RILNRP--VPSLSNMENT 202

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
              A  + +K  P     + C+  ++  + +    G+ KE ++F+ L     +R L + F
Sbjct: 203 FTEAFAKMRKQYPGYLAPETCVRSVQASMKYPYEEGIRKEEELFQYLRESGQARALQYAF 262

Query: 126 FAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           FA+R+ +K    +    K    R +  V V+G G MG GIA +     I V+  E + + 
Sbjct: 263 FAERSVNKWSTPSGASWKTATARPISSVGVLGLGTMGRGIAISFARVGIPVIAVESDQKQ 322

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L    K + + +     +  + Q     +    +      E   VD+VIEAV E + LK+
Sbjct: 323 LEAAKKIVTSTLEKEAAK-SMQQSGQRESAPKPRFSSSMKELASVDLVIEAVFEDMNLKK 381

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
           ++F+EL   C P   L TNTS +D++ +   TS    +IG HFFSPAHVM L+E++ +  
Sbjct: 382 QVFAELSAVCKPEAFLCTNTSALDVDEIAASTSRPQLVIGTHFFSPAHVMKLVEVIPSRH 441

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           +S   I  +M + K +KK+ VVVGNC GF  NR   PY      L+  G     ID A+ 
Sbjct: 442 SSPTTIATVMNLSKKMKKIAVVVGNCYGFVGNRMLQPYFNQTYFLLEDGSKPEDIDQALE 501

Query: 363 SFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVDLLLKSGR 411
            FGL +GP ++ DLAG  V          T        P R    +  SP+ D+L   GR
Sbjct: 502 EFGLKMGPLRMSDLAGLDVGWKVRKGRGLTGPALPPGTPARKRGNARYSPIPDMLCDLGR 561

Query: 412 NGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
            G+  G+G Y Y+K  G   KPDP +   + E R   +I    KP  + + EI E  L+ 
Sbjct: 562 FGQKTGQGWYLYDKPLGRVHKPDPWLSKFLSEYRETHHI----KPRVIDQDEIRERCLYA 617

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE+  +L EG+      +D   + G  +P +RGG +F+A  VG   V   L+K+ Q  
Sbjct: 618 LINEAFHILGEGMAASPEHIDVIYLHGYGWPRHRGGPMFYASTVGLPTVLEKLQKYYQQN 677

Query: 530 GNF--FKPSRFLEERATKGIP-------LSAPVSS 555
            +    +P  +L++ A++G P       L+ P SS
Sbjct: 678 PDIPQLEPCNYLKKLASQGNPPLKEWQSLAGPPSS 712


>gi|375119946|ref|ZP_09765113.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Dublin str. SD3246]
 gi|326624213|gb|EGE30558.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Dublin str. SD3246]
          Length = 708

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 160 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 215

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 216 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 275

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 276 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 333

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +  ++ +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 334 NTQGINHALKYSWDLLETKVRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 393

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 394 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 453

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 454 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILVPYINEAIRMLTEGERVEHID 513

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 514 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 572

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG K K   DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 573 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 620

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 621 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 680

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 681 RYAPCEQL 688


>gi|425289358|ref|ZP_18680205.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3006]
 gi|408213594|gb|EKI38078.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3006]
          Length = 714

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDALPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|12836375|dbj|BAB23628.1| unnamed protein product [Mus musculus]
          Length = 718

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/561 (30%), Positives = 276/561 (49%), Gaps = 30/561 (5%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
           + I+++E  KLG++D VV S+ + +  +     I    +P  R L++   + SL     V
Sbjct: 154 RHISTDEALKLGILDVVVKSDPVEEAIKFAQTVIGKPIEPR-RILNKP--VPSLPNMDSV 210

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
              A  + +K  P     + C+  ++  + H     + +EAK+F  L     +R L + F
Sbjct: 211 FAEAIAKVRKQYPGRLAPETCVRSVQASVKHPYEVAIKEEAKLFMYLRGSGQARALQYAF 270

Query: 126 FAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           FA+++ +K    +    K    + V  V V+G G MG GIA +     I VV  E + + 
Sbjct: 271 FAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGIPVVAVESDPKQ 330

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
           L    K I + +    ++      K N     L+      E   VD+VIEAV E + LK+
Sbjct: 331 LDTAKKIITSTLEKEASKSGQASAKPN-----LRFSSSTKELSSVDLVIEAVFEDMNLKK 385

Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
           K+F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAH+M LLE++ +  
Sbjct: 386 KVFAELSALCKPGAFLCTNTSALDVDDIASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRY 445

Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
           +S   I  +M++ K I K+ VVVGNC GF  NR   PY      L+  G     +D  + 
Sbjct: 446 SSPTTIATVMSLSKRIGKIGVVVGNCYGFVGNRMLAPYYNQGYFLIEEGSKPEGVDGVLE 505

Query: 363 SFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVDLLLKSGR 411
            FG  +GPF++ DLAG  V          T        P R    +  SP+ D+L ++GR
Sbjct: 506 EFGFRMGPFRVSDLAGLDVGWKVRKGQGLTGPSLPPGTPTRKRGNTRYSPIADMLCEAGR 565

Query: 412 NGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
            G+  GKG Y Y+K  G   KPDP +   + + R   +I    K  S++++EI+E  L+ 
Sbjct: 566 FGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETHHI----KQRSISKEEILERCLYS 621

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE+ R+LEEG+      +D   + G  +P + GG +++A +VG   V   L+K+ +  
Sbjct: 622 LINEAFRILEEGMAASPEHIDVIYLHGYGWPRHVGGPMYYAASVGLPTVLEKLQKYYRQN 681

Query: 530 GNF--FKPSRFLEERATKGIP 548
            +    +PS +L     +G P
Sbjct: 682 PDIPQLEPSDYLRRLVAQGSP 702


>gi|431802538|ref|YP_007229441.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas putida HB3267]
 gi|430793303|gb|AGA73498.1| 3-hydroxybutyryl-CoA epimerase [Pseudomonas putida HB3267]
          Length = 694

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 233/459 (50%), Gaps = 16/459 (3%)

Query: 99  YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLM 158
           Y G+  E  +F        +R L HVFFA+R  +            R V  VAVIG G M
Sbjct: 243 YEGMALERDIFISRRESAQARALRHVFFAERDLASRRRTLARQAPVRAVDSVAVIGAGTM 302

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           GSGIA       I  VL +     L +G   +E      + +G+L+ +KA      ++  
Sbjct: 303 GSGIALCLANAGIATVLIDTQPAALDRGRAAVERYYVSALEKGRLSSEKAAEHAGHIRYE 362

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
                    D++IEAV E + +KQ +F  L++   P  ILATNTS +D++ +   T    
Sbjct: 363 GSLEAIAGADLIIEAVFEDLAVKQDVFRTLDRFAKPGAILATNTSYLDVDAIASVTDRPG 422

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
            +IG HFFSPAHVM LLE+V+T      V+  ++ +G  + K  V VG+C GF  NR   
Sbjct: 423 DVIGMHFFSPAHVMKLLEVVKTAHLHPDVLATVLQLGGRLGKTAVAVGHCYGFVGNRLLA 482

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
              + A  L+  G     +D  +R FG PIGPF+L DLAG  +A    K   +       
Sbjct: 483 VREREATFLLEEGASPEDVDRVLRGFGFPIGPFELRDLAGVDIAWFNRKGRGEHLGQAER 542

Query: 399 QSPLVDLLLKSGRNGKANGKGLYTYEKGS-KPKPDPSVLPIIEECRRLSNIMPGGKPISV 457
           +  L++ L ++GR G+ +G G Y YE+G  K  PDP V  ++ E R    +    +P  +
Sbjct: 543 RCNLIEQLHEAGRLGQKSGAGYYRYEEGQRKGSPDPFVAKMLVEHRHARGL----EPRVI 598

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
           ++ EI++  LF ++NE+  +LE+GIV   +D+D   + G  FP YRGG++++AD +G   
Sbjct: 599 SDDEILQRCLFVMINEAAHMLEQGIVDSPNDIDLIWIHGYGFPRYRGGLLYYADQIGLTQ 658

Query: 518 VYTSLKKWSQLYGNFFKPSR------FLEERATKGIPLS 550
           +  +L++W+        P R       L+ RA + + LS
Sbjct: 659 IGEALEQWA-----LKHPDRQLNVCALLQSRAKERVSLS 692


>gi|193062429|ref|ZP_03043524.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli E22]
 gi|194428643|ref|ZP_03061181.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B171]
 gi|260844928|ref|YP_003222706.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O103:H2 str. 12009]
 gi|300922044|ref|ZP_07138187.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           182-1]
 gi|301328848|ref|ZP_07221890.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           78-1]
 gi|415796919|ref|ZP_11497888.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           E128010]
 gi|417176510|ref|ZP_12006306.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.2608]
 gi|417182738|ref|ZP_12009295.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93.0624]
 gi|417251364|ref|ZP_12043129.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           4.0967]
 gi|417624234|ref|ZP_12274533.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_H.1.8]
 gi|419290283|ref|ZP_13832375.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11A]
 gi|419295614|ref|ZP_13837659.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11B]
 gi|419301070|ref|ZP_13843069.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11C]
 gi|419307202|ref|ZP_13849101.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11D]
 gi|419312208|ref|ZP_13854070.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11E]
 gi|419323797|ref|ZP_13865490.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12B]
 gi|419329765|ref|ZP_13871369.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12C]
 gi|419335408|ref|ZP_13876934.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12D]
 gi|419340793|ref|ZP_13882257.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12E]
 gi|419869598|ref|ZP_14391801.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O103:H2 str. CVM9450]
 gi|420392098|ref|ZP_14891349.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli EPEC
           C342-62]
 gi|422956299|ref|ZP_16968773.1| fatty acid oxidation complex subunit alpha [Escherichia coli H494]
 gi|450218921|ref|ZP_21896052.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O08]
 gi|192932095|gb|EDV84694.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli E22]
 gi|194413366|gb|EDX29650.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli B171]
 gi|257760075|dbj|BAI31572.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli O103:H2 str. 12009]
 gi|300421581|gb|EFK04892.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           182-1]
 gi|300844797|gb|EFK72557.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           78-1]
 gi|323162246|gb|EFZ48105.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           E128010]
 gi|345377195|gb|EGX09127.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_H.1.8]
 gi|371599834|gb|EHN88612.1| fatty acid oxidation complex subunit alpha [Escherichia coli H494]
 gi|378130084|gb|EHW91454.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11A]
 gi|378141456|gb|EHX02672.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11B]
 gi|378148185|gb|EHX09325.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11D]
 gi|378150686|gb|EHX11801.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11C]
 gi|378157836|gb|EHX18867.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC11E]
 gi|378164873|gb|EHX25814.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12B]
 gi|378170081|gb|EHX30967.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12C]
 gi|378181287|gb|EHX41959.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12D]
 gi|378187704|gb|EHX48315.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC12E]
 gi|386179202|gb|EIH56681.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.2608]
 gi|386184591|gb|EIH67330.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           93.0624]
 gi|386218213|gb|EII34696.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           4.0967]
 gi|388342192|gb|EIL08244.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O103:H2 str. CVM9450]
 gi|391311865|gb|EIQ69488.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli EPEC
           C342-62]
 gi|449317370|gb|EMD07460.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O08]
          Length = 714

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|402701457|ref|ZP_10849436.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas fragi A22]
          Length = 715

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 281/558 (50%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVVT ++L       +K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVTLDKLGAAALDVIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     S
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSAS 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QCLIGLFLNDQELKKKAKAYDKIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   +D L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE+  + K     D SVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYEEDKRGKQKKVVDSSVLEVLKPIVYEQR------------DVTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAQFVALADQYAEL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKNG 710


>gi|90420390|ref|ZP_01228298.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335724|gb|EAS49474.1| fatty oxidation complex, alpha subunit FadB [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 691

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/546 (29%), Positives = 271/546 (49%), Gaps = 16/546 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+L    + +     LG++D +   +   +  R +A  I    +P  R      +L    
Sbjct: 155 MILTGTPVGAASAVTLGIVDELAAGDLRAEALR-FANAIVTEGRPLRRIRDEAQRLDG-E 212

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
                L+ AR +  +        +  +D +          G+ +E ++F EL+    S+ 
Sbjct: 213 NVDAALEGARERHGRKMRGYESFERAMDAVANAARLPFDEGLAREREIFVELLGGTQSKA 272

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
             +VF A RA +K+ ++       R + +V +IG G MG GIA   +   I V + E   
Sbjct: 273 QRYVFGATRAVAKIADIP-ADTPTRKIGRVGIIGAGTMGGGIAMKFLSAGIPVTIIEQAQ 331

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
           E L +G  TI  N    V RG++  + A  A  +L   L++ +  D D++IEA  E + +
Sbjct: 332 EALDRGTGTIAKNYAASVRRGRIRAEDAEKANALLTPSLEFDDLADCDLIIEAAFEEMAV 391

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K++IF+ L+       ILA+NTS +D++ +   T     ++G HFFSPA++M LLE+VR 
Sbjct: 392 KKEIFARLDAIARDGAILASNTSYLDIDEIASVTKRPADVLGMHFFSPANIMKLLEVVRG 451

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
             T+  VI   M +G+ I K  V+VG C GF  NR      + A  L+  G   + +D  
Sbjct: 452 RETAKDVIATAMKIGRDIGKTAVLVGVCHGFVGNRMLSARQREANKLILEGAMPWDVDRV 511

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +  FGLP+GPFQ+ DLAG  +    ++E  K          + + L ++ R G+    G 
Sbjct: 512 LTDFGLPMGPFQMADLAGLDL--GWNRETSKG-------ETIRERLCEADRRGQKTSAGF 562

Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
           Y Y++  K  P      ++EE   + +   G +  ++ + EI+E +++P++NE  ++L+E
Sbjct: 563 YDYDENRKGSPS----AMVEEIILIKSREEGFERRAIGDDEILERLVYPMINEGAKILDE 618

Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
           GI  RASD+D   + G  +P YRGG +F AD +G + +   ++++   +G  F P+  LE
Sbjct: 619 GIAQRASDIDVVWINGYGWPVYRGGPMFTADTIGPDVILDKMREFEARFGEDFAPAPMLE 678

Query: 541 ERATKG 546
             A +G
Sbjct: 679 RIAREG 684


>gi|398843436|ref|ZP_10600581.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM102]
 gi|398102891|gb|EJL93066.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM102]
          Length = 715

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+L       LK +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEKLQEAALNLLKGAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + K     DPSVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYGYETDKRGKQKKVADPSVLEVLKPIVFEQRE------------VTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKNG 710


>gi|300903733|ref|ZP_07121648.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           84-1]
 gi|301304884|ref|ZP_07210988.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           124-1]
 gi|415864075|ref|ZP_11537226.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           85-1]
 gi|300404315|gb|EFJ87853.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           84-1]
 gi|300839813|gb|EFK67573.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           124-1]
 gi|315255280|gb|EFU35248.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           85-1]
          Length = 714

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TS Q I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSVQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|281354037|gb|EFB29621.1| hypothetical protein PANDA_003730 [Ailuropoda melanoleuca]
          Length = 700

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 185/584 (31%), Positives = 289/584 (49%), Gaps = 52/584 (8%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D +V S   EE +K++ R+    + +RR   KP I+SL   D +  
Sbjct: 133 RHILADEALKLGILDEIVNSDPVEEAIKLAERISDQPLESRRLCNKP-IQSLPNMDSI-- 189

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ +K  P     + C+  ++  + +    G+ KE ++F  L     +
Sbjct: 190 FSEAF-------LKMRKQHPGCLSQETCVRAVQAAVQYPYEVGLKKEEELFMYLQKSGQA 242

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L +VFFA+R  SK    +    K      +  V V+G G MG GI  +     I V+ 
Sbjct: 243 RALQYVFFAERNVSKWSTPSGASWKTAVAHHISSVGVVGLGTMGRGIVISLAKAKIPVIA 302

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--EFKDVDMVIEA 233
            E +     K ++  E  +  L+ +       +++     K  L  S  E   VD+VIEA
Sbjct: 303 VESDK----KQLEVAEKIISSLLEKEASKMQHSSHPWLGPKPRLTTSMKELGGVDLVIEA 358

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM 
Sbjct: 359 VFEEINLKKQVFAELSAVCKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMK 418

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           LLEI+  + +S   I  +M + K IKK+ VVVGNC GF  NR    Y      L+  G  
Sbjct: 419 LLEIIPGQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLKAYYNQTYFLLEEGSK 478

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDRSFQS----PL 402
              +D  +  FGL +GPF++ DLAG  +          T  +     P R   +    P+
Sbjct: 479 PEGVDQVLEEFGLKMGPFRVSDLAGLDIGWKSRQGQGLTGPKLPSGTPARKRGNRRYCPI 538

Query: 403 VDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
            D+L +SGR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P  +++ 
Sbjct: 539 PDMLCESGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETYHI----EPRIISQD 594

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EI+E  L+ ++NE+ R+LEEG+      +D   + G  +P +RGG +F+A  VG   V  
Sbjct: 595 EILERCLYSLINEAFRILEEGMAAAPEHIDVIYLHGYGWPRHRGGPMFYASTVGLPTVLE 654

Query: 521 SLKKWSQLYGNF--FKPSRFLEERATKGIP-------LSAPVSS 555
            L+K+ +   +    +P  +L++ A+ G P       L+ P SS
Sbjct: 655 KLQKYYRQNPDIPQLEPCDYLKKLASLGNPPLKEWQSLAGPPSS 698


>gi|218554896|ref|YP_002387809.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli IAI1]
 gi|417131926|ref|ZP_11976711.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           5.0588]
 gi|417146068|ref|ZP_11987026.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           1.2264]
 gi|419807426|ref|ZP_14332482.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli AI27]
 gi|419922993|ref|ZP_14440966.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 541-15]
 gi|432765725|ref|ZP_20000163.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE48]
 gi|433092718|ref|ZP_20278985.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE138]
 gi|254788657|sp|B7M6M2.1|FADJ_ECO8A RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|218361664|emb|CAQ99260.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli IAI1]
 gi|384469567|gb|EIE53722.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli AI27]
 gi|386149780|gb|EIH01069.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           5.0588]
 gi|386163520|gb|EIH25315.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           1.2264]
 gi|388394756|gb|EIL56012.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 541-15]
 gi|431309900|gb|ELF98093.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE48]
 gi|431610048|gb|ELI79353.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE138]
          Length = 714

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|198244761|ref|YP_002216460.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|445147226|ref|ZP_21387982.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Dublin str.
           SL1438]
 gi|254788649|sp|B5FPN1.1|FADJ_SALDC RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|197939277|gb|ACH76610.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|444844769|gb|ELX69995.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Dublin str.
           SL1438]
          Length = 715

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 276/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +  ++ +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILVPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|398852304|ref|ZP_10608967.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM80]
 gi|398244491|gb|EJN30041.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM80]
          Length = 715

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+  +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVSAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLDKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNAIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   +D+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKTG 710


>gi|170695997|ref|ZP_02887135.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
           C4D1M]
 gi|170139077|gb|EDT07267.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia graminis
           C4D1M]
          Length = 710

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 179/555 (32%), Positives = 282/555 (50%), Gaps = 24/555 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAV-----VTSEELLKVSRLWALDIAARRKPWIRSLHRTDK 55
           ++L  +  +++E   LGL+D +     V +E L  V  L A D A RR         T  
Sbjct: 161 LILSGRHASAKEALALGLVDRLGASGDVLAEGLAYVHELLAGDAAVRR---------TRD 211

Query: 56  LGSLSE---AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 112
            G+LS+   +   +  AR +  K +  +      +D IE  I      G+  E ++F + 
Sbjct: 212 AGALSDRAASLAAVAAARAETAKKSRGLFSPLKIVDAIEAAITQRLEEGLRVERQLFLQC 271

Query: 113 VMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIY 172
           +      GL+H FFA+R   K P   D   KPR +  V V+GGG MG+GIA A +   + 
Sbjct: 272 LDSPQRAGLIHAFFAEREVLKAPETRDA--KPRALNAVGVVGGGTMGAGIAVAVLDAGLP 329

Query: 173 VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
           V + E +   L +G   IE    GL+ +G+L+  K +  +    G   Y    + D+VIE
Sbjct: 330 VTMIERDEASLARGRAHIEKVYDGLIAKGRLSAVKKDEFMARWTGSTSYDALSNADLVIE 389

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + +KQ +F+EL++ C    +LATNTS +D++ +    S    + G HFFSPA++M
Sbjct: 390 AVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVTGLHFFSPANIM 449

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLE+V  +  SA V+     + K ++K PV  G C GF  NR    Y  +A  ++  G 
Sbjct: 450 KLLEVVVPQAVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRILAVYRSAADAMMEDGA 509

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
             ++ID+A+R+FG P+GPFQ++DLAG  +  A  K         +    + D L + G  
Sbjct: 510 SPYQIDAAMRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRDPAARYVQIADRLCERGWF 569

Query: 413 GKANGKGLYTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+  G+G Y Y +GS+  +PDP V  II+  R  + I P     + T+ EI+   +  ++
Sbjct: 570 GQKTGRGFYLYPEGSRSGQPDPEVEAIIDAERERAGITPR----NFTDDEIIRRYMAAMI 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE   V+ E I +R  D+D   + G  FP YRGG + +AD VG   +   ++ +++    
Sbjct: 626 NEGANVVHERIALRPLDVDVTLLYGYGFPRYRGGPMKYADMVGLPSILADIRGFAKEDPL 685

Query: 532 FFKPSRFLEERATKG 546
           F++ S  L E   +G
Sbjct: 686 FWQASPLLVELVERG 700


>gi|15598210|ref|NP_251704.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PAO1]
 gi|116051015|ref|YP_790158.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890787|ref|YP_002439651.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa LESB58]
 gi|254235987|ref|ZP_04929310.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           C3719]
 gi|254241717|ref|ZP_04935039.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           2192]
 gi|313108304|ref|ZP_07794336.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           39016]
 gi|355641251|ref|ZP_09052136.1| fatty acid oxidation complex subunit alpha [Pseudomonas sp. 2_1_26]
 gi|386058012|ref|YP_005974534.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa M18]
 gi|386067046|ref|YP_005982350.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa NCGM2.S1]
 gi|416857746|ref|ZP_11912934.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa 138244]
 gi|418586418|ref|ZP_13150460.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa MPAO1/P1]
 gi|418590973|ref|ZP_13154877.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa MPAO1/P2]
 gi|420139158|ref|ZP_14647016.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa CIG1]
 gi|421153542|ref|ZP_15613084.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa ATCC 14886]
 gi|421159671|ref|ZP_15618786.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa ATCC 25324]
 gi|421166838|ref|ZP_15625059.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa ATCC 700888]
 gi|421173788|ref|ZP_15631525.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa CI27]
 gi|421179825|ref|ZP_15637399.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa E2]
 gi|421517544|ref|ZP_15964218.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PAO579]
 gi|424942383|ref|ZP_18358146.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           NCMG1179]
 gi|451985347|ref|ZP_21933569.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Pseudomonas aeruginosa
           18A]
 gi|81622253|sp|Q9HZJ2.1|FADB_PSEAE RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|122260146|sp|Q02PH8.1|FADB_PSEAB RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|254788570|sp|B7UYR6.1|FADB_PSEA8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|9949116|gb|AAG06402.1|AE004726_8 fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           PAO1]
 gi|115586236|gb|ABJ12251.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126167918|gb|EAZ53429.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           C3719]
 gi|126195095|gb|EAZ59158.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           2192]
 gi|218771010|emb|CAW26775.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           LESB58]
 gi|310880838|gb|EFQ39432.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           39016]
 gi|334840255|gb|EGM18914.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa 138244]
 gi|346058829|dbj|GAA18712.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas aeruginosa
           NCMG1179]
 gi|347304318|gb|AEO74432.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa M18]
 gi|348035605|dbj|BAK90965.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa NCGM2.S1]
 gi|354830849|gb|EHF14881.1| fatty acid oxidation complex subunit alpha [Pseudomonas sp. 2_1_26]
 gi|375043161|gb|EHS35792.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa MPAO1/P1]
 gi|375050214|gb|EHS42697.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa MPAO1/P2]
 gi|403248080|gb|EJY61678.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa CIG1]
 gi|404347026|gb|EJZ73375.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PAO579]
 gi|404523510|gb|EKA33930.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa ATCC 14886]
 gi|404535312|gb|EKA45013.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa CI27]
 gi|404536536|gb|EKA46173.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa ATCC 700888]
 gi|404546403|gb|EKA55457.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa E2]
 gi|404546591|gb|EKA55641.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa ATCC 25324]
 gi|451756964|emb|CCQ86092.1| Enoyl-CoA hydratase / Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Pseudomonas aeruginosa
           18A]
 gi|453043747|gb|EME91475.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PA21_ST175]
          Length = 715

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 174/559 (31%), Positives = 274/559 (49%), Gaps = 36/559 (6%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWA-------LDIAARRKPWIRSLHRTDKLG 57
            K   +E+  K+G +DAVV  E+L   +   A       LD  ARR+P +  L    KL 
Sbjct: 171 GKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL----KLN 226

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           ++ +           A +  PN P     +  I++    G    +  EA  F +L     
Sbjct: 227 AIEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSV 286

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           ++ L+ +F   +   K     D   K   V+  AV+G G+MG GIA    L    +++K+
Sbjct: 287 AQSLIGLFLNDQELKKKAKKYDEVAKD--VKLAAVLGAGIMGGGIAYQSALKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      +   V +G+LT  K   AL  ++  + Y +F +VD+V+EAV+E+
Sbjct: 345 IREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E A     I+A+NTSTI ++++ +     +   G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E+T    I   +   K + K P+VV +C GF VNR  FPY      L+S GVD  RI
Sbjct: 465 IRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L D+ G            + FPDR        VD++ ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   + KP    DP       PI+ E R             VT+++IV  ++
Sbjct: 585 NGKGFYAYETDKRGKPKKVTDPQAYEVLKPIVVEQRE------------VTDEDIVNFMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         K+++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAE 692

Query: 528 LYGNFFKPSRFLEERATKG 546
           L G  + P+  L E A  G
Sbjct: 693 L-GALYHPTAKLREMAKNG 710


>gi|415840477|ref|ZP_11521905.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           RN587/1]
 gi|417282515|ref|ZP_12069815.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3003]
 gi|425278640|ref|ZP_18669885.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           ARS4.2123]
 gi|323187934|gb|EFZ73229.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           RN587/1]
 gi|386246844|gb|EII88574.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli 3003]
 gi|408201827|gb|EKI26970.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           ARS4.2123]
          Length = 714

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 279/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M++  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MIITGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDISAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F     L E + +G
Sbjct: 688 RFTSCDRLVEMSERG 702


>gi|197099993|ref|NP_001127606.1| peroxisomal bifunctional enzyme [Pongo abelii]
 gi|75054763|sp|Q5R5M8.1|ECHP_PONAB RecName: Full=Peroxisomal bifunctional enzyme; Short=PBE;
           Short=PBFE; Includes: RecName: Full=Enoyl-CoA
           hydratase/3,2-trans-enoyl-CoA isomerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|55732475|emb|CAH92938.1| hypothetical protein [Pongo abelii]
          Length = 723

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 179/569 (31%), Positives = 285/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 156 RHILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA  +LK+ R       P     +AC+  ++  + +    GV KE ++F  L     +
Sbjct: 213 FSEA--LLKMRRQH-----PGCLAQEACVRAVQAAVQYPYEVGVKKEEELFLYLFQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + F A+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFLAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 326 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAICKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 444 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   K DP +   + + R   +I    +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKADPWLSKFLSQYRETHHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|296224758|ref|XP_002758183.1| PREDICTED: peroxisomal bifunctional enzyme [Callithrix jacchus]
          Length = 722

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 175/573 (30%), Positives = 284/573 (49%), Gaps = 41/573 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRT 53
           ++   + I + E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   
Sbjct: 150 LITTGRHILAGEALKLGILDKVVNSDLLEEAIRFAQRVSDQPLESRRLFKKP-IQSLPNM 208

Query: 54  DKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 113
           D          +   A L+ +K  P     +AC+  ++  + +    G  KE ++F+ L+
Sbjct: 209 D---------SIFGEALLKMRKQHPGCLAQEACVRAVQAAVQYPYEVGSKKEEELFQYLL 259

Query: 114 MLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNN 170
               +R L + F A+R  +K  + +    K    + V  V V+G G MG GI  +     
Sbjct: 260 QSGQARALQYAFLAERKANKWSSPSGASWKTASAQPVSSVGVVGLGTMGRGIVISFARAR 319

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
           I V+  + +   L    K I + +    ++ + +    +     L   +   E   VD+V
Sbjct: 320 IPVIAVDSDKNQLATANKIITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLV 377

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           IEAV E + LK+++F+EL   C P   L TNTS++D++ +   T+    +IG HFFSPAH
Sbjct: 378 IEAVFEDMSLKKQVFAELSAVCKPEAFLCTNTSSLDVDEIASSTNRPHLVIGTHFFSPAH 437

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350
           +M LLE++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY      L+  
Sbjct: 438 IMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYSQTYFLLEE 497

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSK-------EFDKAFPDRSFQS--- 400
           G     +D  +  FG  +GPF++ DLAG  V   + K             P R   S   
Sbjct: 498 GSKPEEVDRVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGSRRY 557

Query: 401 -PLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISV 457
            P+ D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P  +
Sbjct: 558 CPIPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETHHI----EPRII 613

Query: 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 517
           +  EI+E  L+ ++NE+ R+L EGI      +D   + G  +P +RGG +F+A  VG   
Sbjct: 614 SRDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPA 673

Query: 518 VYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 548
           V   L+K+ +   +    +PS +L++ A++G P
Sbjct: 674 VLEKLQKYYRQNPDIPQLEPSDYLKKLASQGNP 706


>gi|410631340|ref|ZP_11342017.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
 gi|410149163|dbj|GAC18884.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola arctica BSs20135]
          Length = 714

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 185/555 (33%), Positives = 279/555 (50%), Gaps = 27/555 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML   S+ +++  K G++D +V    LL V    A+++A + KP  R+  + D +G   
Sbjct: 174 MMLTGASVRAKQAKKYGIVDDMVPQSILLDV----AIEMAKKPKPK-RNGPKLDLMGKFL 228

Query: 61  EAREV-----LKLARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 114
           E   V        AR Q A KT  N P  +  +D IE G+  G   G+  EAK F  LVM
Sbjct: 229 ENTSVGRNLMFNQARKQTASKTQGNYPSPELIIDCIETGLSQGFRKGLEVEAKHFGNLVM 288

Query: 115 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYV 173
              S  L  +FFA     K   V   G++P  ++KV V+GGGLMG GIA        +  
Sbjct: 289 SSESAALRSLFFATTDMKKETGVQ--GVQPARLKKVGVLGGGLMGGGIAFVTATKAGLPA 346

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            +K++ SE +   IK     +   V RG + +      + +L G +DYS F D D+VIEA
Sbjct: 347 RIKDIRSEGIANAIKYSFDILNKKVKRGFMQKMAMQKQMALLTGSIDYSGFSDADVVIEA 406

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LKQ + +E+E+ C  H I A+NTS+I ++ +  K    +++IG H+FSP   MP
Sbjct: 407 VFEDLTLKQNMVAEVEENCAEHTIFASNTSSIPISQIAAKAKRPEQVIGLHYFSPVDKMP 466

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           L E++  E+TS Q I   + + K   K P+VV +  GF VNR   PY   A  ++  G  
Sbjct: 467 LAEVIAHEKTSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLSGEP 526

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
           +  ID ++  FG P+GP +LLD  G  V           F DR   +P  D +L   R G
Sbjct: 527 IDHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIGPILQAQFGDRFASNPGFDKILADDRKG 586

Query: 414 KANGKGLYTYEKGSKP--KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           K N +G Y Y  G  P  + D SV  ++        I P  K   ++ ++I E  +  ++
Sbjct: 587 KKNKRGFYDYS-GKNPGKEVDASVYTLL-------GITPASK---MSHEQIAERCVLLML 635

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+   L+EG+V  A D D  ++ G+ FP + GG   +   +G  +V   L+ +  L G+
Sbjct: 636 NEAAMCLDEGVVRNARDGDIGAIFGIGFPPFLGGPFRYMHTLGITHVVARLEHYQGLLGD 695

Query: 532 FFKPSRFLEERATKG 546
            F P+  L++   +G
Sbjct: 696 KFTPAESLKKMVEEG 710


>gi|296388491|ref|ZP_06877966.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PAb1]
 gi|416874145|ref|ZP_11917955.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa 152504]
 gi|334843784|gb|EGM22368.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa 152504]
          Length = 715

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 174/559 (31%), Positives = 274/559 (49%), Gaps = 36/559 (6%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWA-------LDIAARRKPWIRSLHRTDKLG 57
            K   +E+  K+G +DAVV  E+L   +   A       LD  ARR+P +  L    KL 
Sbjct: 171 GKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL----KLN 226

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           ++ +           A +  PN P     +  I++    G    +  EA  F +L     
Sbjct: 227 AIEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSV 286

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           ++ L+ +F   +   K     D   K   V+  AV+G G+MG GIA    L    +++K+
Sbjct: 287 AQSLIGLFLNDQELKKKAKKYDEVAKD--VKLAAVLGAGIMGGGIAYQSALKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      +   V +G+LT  K   AL  ++  + Y +F +VD+V+EAV+E+
Sbjct: 345 IREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E A     I+A+NTSTI ++++ +     +   G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E+T    I   +   K + K P+VV +C GF VNR  FPY      L+S GVD  RI
Sbjct: 465 IRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L D+ G            + FPDR        VD++ ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   + KP    DP       PI+ E R             VT+++IV  ++
Sbjct: 585 NGKGFYAYETDKRGKPKKVTDPQAYEVLKPIVVEQRE------------VTDEDIVNFMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         K+++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAE 692

Query: 528 LYGNFFKPSRFLEERATKG 546
           L G  + P+  L E A  G
Sbjct: 693 L-GALYHPTAKLREMAKNG 710


>gi|307311099|ref|ZP_07590743.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
           W]
 gi|378712225|ref|YP_005277118.1| fatty acid oxidation complex subunit FadJ [Escherichia coli KO11FL]
 gi|386609716|ref|YP_006125202.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli W]
 gi|386700686|ref|YP_006164523.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli KO11FL]
 gi|386710202|ref|YP_006173923.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli W]
 gi|306908605|gb|EFN39102.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
           W]
 gi|315061633|gb|ADT75960.1| fused enoyl-CoA hydratase and epimerase and
           isomerase/3-hydroxyacyl-CoA dehydrogenase [Escherichia
           coli W]
 gi|323377786|gb|ADX50054.1| fatty acid oxidation complex, alpha subunit FadJ [Escherichia coli
           KO11FL]
 gi|383392213|gb|AFH17171.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli KO11FL]
 gi|383405894|gb|AFH12137.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli W]
          Length = 714

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E +
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|261340726|ref|ZP_05968584.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317143|gb|EFC56081.1| fatty oxidation complex, alpha subunit FadJ [Enterobacter
           cancerogenus ATCC 35316]
          Length = 715

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 271/554 (48%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW-IRSLHRTDKLGSL 59
           M+L  K + + +  K GL+D VV    LL  +   AL     ++P  +R       LG  
Sbjct: 167 MILTGKQLRARQALKAGLVDEVVPQAILLDAAVERALKGRQAKRPLPVRERILAGPLG-- 224

Query: 60  SEAREVL-KLA-RLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
              R VL KLA +   +KT  N P  +  L+VIE G+  G  SG   EAK F EL M   
Sbjct: 225 ---RAVLFKLAGKKTEQKTRGNYPAAKRILEVIETGLSQGASSGYAAEAKAFGELAMTPQ 281

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           S+ L ++FFA     K P  +D    P     V   G    G    TA     + V +K+
Sbjct: 282 SQALRNIFFASTEVKKDPG-SDAAPAPLQAVGVLGGGLMGGGIAFVTAS-KGKLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +N++ +   ++    N+   V R  +   + +  L M+ G  DYS F+  D+VIEAV E 
Sbjct: 340 INAKGINHALQYSWQNLDRKVKRRHIKASERDKTLAMITGTTDYSGFRHRDLVIEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +++E  C PH I A+NTS+I +  +    +  +++IG HFFSP   MPL+E+
Sbjct: 400 LALKQQMVADVEAHCAPHTIFASNTSSIPIGEIAANAARPEQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    T  Q +  ++ + K   K P+VV +  GF VNR   PY   A  L++ G  +  +
Sbjct: 460 IPHANTCPQTVATVVKLAKKQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKIEHV 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+ +FG P+GP QLLD  G           + A+ DR F  P  +V  +LK  R G+ 
Sbjct: 520 DEALVNFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGDR-FSPPANIVSAILKDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           N +G Y Y    + SK + DPSV  +I    +       G+   ++  +  E  +  ++N
Sbjct: 579 NERGFYLYAAKGRKSKKQVDPSVYGLITTTGQ-------GR---LSAAQCAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R   E +V  A D D  +V G+ FP + GG   + D +GA  V   L++ +  YG  
Sbjct: 629 EAARCFGEQVVKSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGEVVAILQRLASQYGPR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L + A +G
Sbjct: 689 FTPCDELLQMAERG 702


>gi|407362825|ref|ZP_11109357.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas mandelii JR-1]
          Length = 715

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 274/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             VT+++I+  ++ P+  E
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKPIVYEQR------------EVTDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E    G
Sbjct: 698 HPTAKLREMVKTG 710


>gi|56412715|ref|YP_149790.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197361649|ref|YP_002141285.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|81359559|sp|Q5PCX6.1|FADJ_SALPA RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|254788614|sp|B5BBA1.1|FADJ_SALPK RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|56126972|gb|AAV76478.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093125|emb|CAR58569.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 715

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 276/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L+ K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILIGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|333893918|ref|YP_004467793.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas sp. SN2]
 gi|332993936|gb|AEF03991.1| multifunctional fatty acid oxidation complex subunit alpha
           [Alteromonas sp. SN2]
          Length = 712

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 187/554 (33%), Positives = 282/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DK-LG 57
           MML      +++  K G++D VV    LLKV+  +AL    +RKP   +  ++  DK L 
Sbjct: 172 MMLTGAPARAKQAKKYGIVDDVVPHSVLLKVAEQFAL----KRKPEREAPQKSVMDKMLE 227

Query: 58  SLSEAREVL-KLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 115
           +    R ++ K AR     KT  N P     +DVIE G+  G  +G+  EA+ F +LVM 
Sbjct: 228 NTGPGRGMMFKKAREATFAKTKGNYPAPGYIIDVIETGMRDGIEAGLKAEAEAFGKLVMT 287

Query: 116 DTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVV 174
             S  L  +FFA     K   +   G+ P  ++KV V+GGGLMG GIA        + V 
Sbjct: 288 PESFQLRQIFFATTDMKKENGIE--GVAPEKMKKVGVLGGGLMGGGIAFVTSTKAGVPVR 345

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V  E +   +K     +   V +  +   +    L ++ G LDYS ++D D+V+EAV
Sbjct: 346 IKDVRPEGIANAMKYSYDILNKKVKKRFMRSSEMQKQLSLITGTLDYSGYQDTDIVVEAV 405

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQK+ +++E+ C  + I A+NTS+I +  +  K +  + +IG H+FSP   MPL
Sbjct: 406 FEDLDLKQKMVADIEENCKENTIFASNTSSIPITQIAAKAARPENVIGLHYFSPVDKMPL 465

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
            E++  E TS QVI   +   K   K PVVV +  GF VNR   PY   A  L+  G  +
Sbjct: 466 AEVIAHETTSDQVISSTVEFAKKQGKTPVVVKDGAGFYVNRILAPYMNEAASLILAGEPI 525

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGK 414
             ID ++  FG P+GP +LLD  G  V         +AF +R       D +L  GR GK
Sbjct: 526 EHIDKSLVKFGFPVGPVKLLDEVGIDVGTKIIPFLVEAFGERFTAPSAFDKVLADGRKGK 585

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            N KG Y+YE G KP  +     + E    L  + P  K   ++EKE+ E  +  ++NE+
Sbjct: 586 KNQKGFYSYE-GKKPGKE-----VDESIYSLLGLTPSTK---LSEKEVAERCVLMMLNEA 636

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+E ++  A D D  ++ G+ FP + GG   + D +G  +V   L  ++   G+ F 
Sbjct: 637 ARCLDESVIRNARDGDIGAIFGIGFPPFLGGPFRYMDTLGIKHVVERLNHYASTVGDKFT 696

Query: 535 PSRFL----EERAT 544
           P+  L    EE +T
Sbjct: 697 PADVLVKMAEENST 710


>gi|70729322|ref|YP_259059.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas protegens Pf-5]
 gi|83288144|sp|Q4KFC4.1|FADB_PSEF5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|68343621|gb|AAY91227.1| fatty oxidation complex, alpha subunit [Pseudomonas protegens Pf-5]
          Length = 715

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 279/558 (50%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  ++L       +K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPDKLKDAALALVKRAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQIVLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ N
Sbjct: 526 KIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K K     DPSVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GALYHPTAKLREMAKNG 710


>gi|398998821|ref|ZP_10701578.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM18]
 gi|398133048|gb|EJM22292.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM18]
          Length = 715

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 172/559 (30%), Positives = 278/559 (49%), Gaps = 38/559 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV S++L       +K +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVDSQKLHEAALNLIKGAISGKFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKE--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVLPIIEECRRLSNIMPGGKPI-----SVTEKEIVEMIL 467
           GKG Y YE   + K     DPSVL ++             KPI      VT+++I+  ++
Sbjct: 586 GKGFYAYETDKRGKQKKVADPSVLEVL-------------KPIVFQQLEVTDEDIINWMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ 
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYAD 692

Query: 528 LYGNFFKPSRFLEERATKG 546
           L G  + P+  L E A  G
Sbjct: 693 L-GALYHPTAKLREMAKNG 710


>gi|168261585|ref|ZP_02683558.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|207857806|ref|YP_002244457.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|421357402|ref|ZP_15807713.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 622731-39]
 gi|421361562|ref|ZP_15811821.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 639016-6]
 gi|421367372|ref|ZP_15817566.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 640631]
 gi|421371287|ref|ZP_15821446.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 77-0424]
 gi|421375602|ref|ZP_15825714.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607307-6]
 gi|421379493|ref|ZP_15829562.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 485549-17]
 gi|421384525|ref|ZP_15834550.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 596866-22]
 gi|421388385|ref|ZP_15838375.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 596866-70]
 gi|421392829|ref|ZP_15842778.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 629164-26]
 gi|421397633|ref|ZP_15847545.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 629164-37]
 gi|421401870|ref|ZP_15851735.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 639672-46]
 gi|421407133|ref|ZP_15856942.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 639672-50]
 gi|421411417|ref|ZP_15861182.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 77-1427]
 gi|421418486|ref|ZP_15868188.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 77-2659]
 gi|421420001|ref|ZP_15869682.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 78-1757]
 gi|421424426|ref|ZP_15874068.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 22510-1]
 gi|421430437|ref|ZP_15880024.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 8b-1]
 gi|421433937|ref|ZP_15883490.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648905 5-18]
 gi|421439478|ref|ZP_15888968.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 6-18]
 gi|421444251|ref|ZP_15893682.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 50-3079]
 gi|421447340|ref|ZP_15896742.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 58-6482]
 gi|436679304|ref|ZP_20517735.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE30663]
 gi|436797418|ref|ZP_20523186.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CHS44]
 gi|436808543|ref|ZP_20527967.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1882]
 gi|436817281|ref|ZP_20534363.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1884]
 gi|436830762|ref|ZP_20535504.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1594]
 gi|436849301|ref|ZP_20540470.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1566]
 gi|436856896|ref|ZP_20545818.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1580]
 gi|436862485|ref|ZP_20549168.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1543]
 gi|436872383|ref|ZP_20555405.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1441]
 gi|436879939|ref|ZP_20559773.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1810]
 gi|436889243|ref|ZP_20565164.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1558]
 gi|436897169|ref|ZP_20569816.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1018]
 gi|436901004|ref|ZP_20571928.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1010]
 gi|436909539|ref|ZP_20576263.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1729]
 gi|436917291|ref|ZP_20580825.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0895]
 gi|436923823|ref|ZP_20585192.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0899]
 gi|436933821|ref|ZP_20589976.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1457]
 gi|436942205|ref|ZP_20595188.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1747]
 gi|436948510|ref|ZP_20598723.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0968]
 gi|436957147|ref|ZP_20602815.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1444]
 gi|436968252|ref|ZP_20607661.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1445]
 gi|436976433|ref|ZP_20611831.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1559]
 gi|436990772|ref|ZP_20617069.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1565]
 gi|437004095|ref|ZP_20621824.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1808]
 gi|437014402|ref|ZP_20625480.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1811]
 gi|437027005|ref|ZP_20630016.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0956]
 gi|437045221|ref|ZP_20637656.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1455]
 gi|437048368|ref|ZP_20639407.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1575]
 gi|437060806|ref|ZP_20646633.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1725]
 gi|437069928|ref|ZP_20651357.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1745]
 gi|437075429|ref|ZP_20653883.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1791]
 gi|437080444|ref|ZP_20657048.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1795]
 gi|437090958|ref|ZP_20662949.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 576709]
 gi|437102562|ref|ZP_20666590.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 635290-58]
 gi|437120016|ref|ZP_20671234.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607308-16]
 gi|437127776|ref|ZP_20674866.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607308-19]
 gi|437135736|ref|ZP_20679382.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607307-2]
 gi|437143480|ref|ZP_20684347.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607308-9]
 gi|437154953|ref|ZP_20691413.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 629163]
 gi|437160309|ref|ZP_20694560.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE15-1]
 gi|437167757|ref|ZP_20698955.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_N202]
 gi|437173879|ref|ZP_20701950.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_56-3991]
 gi|437182739|ref|ZP_20707238.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_76-3618]
 gi|437237647|ref|ZP_20714007.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 13183-1]
 gi|437258238|ref|ZP_20716275.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_81-2490]
 gi|437266727|ref|ZP_20720811.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SL909]
 gi|437278694|ref|ZP_20727355.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SL913]
 gi|437285741|ref|ZP_20729801.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_69-4941]
 gi|437313791|ref|ZP_20736959.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 638970-15]
 gi|437332145|ref|ZP_20742138.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 17927]
 gi|437337972|ref|ZP_20743446.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CHS4]
 gi|437405759|ref|ZP_20752256.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 543463 22-17]
 gi|437461188|ref|ZP_20762137.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 561362 1-1]
 gi|437472552|ref|ZP_20765556.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 642044 4-1]
 gi|437493855|ref|ZP_20772229.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 642046 4-7]
 gi|437507726|ref|ZP_20776075.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648898 4-5]
 gi|437531896|ref|ZP_20780789.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648899 3-17]
 gi|437553750|ref|ZP_20784111.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648900 1-16]
 gi|437577094|ref|ZP_20790786.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 1-17]
 gi|437584379|ref|ZP_20792698.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 39-2]
 gi|437600745|ref|ZP_20797281.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648902 6-8]
 gi|437623273|ref|ZP_20804946.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648903 1-6]
 gi|437660517|ref|ZP_20812589.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 653049 13-19]
 gi|437735321|ref|ZP_20832409.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 16-16]
 gi|437769386|ref|ZP_20835412.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 76-2651]
 gi|437804633|ref|ZP_20838961.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 33944]
 gi|438088290|ref|ZP_20859746.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 81-2625]
 gi|438098372|ref|ZP_20862780.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 62-1976]
 gi|438111711|ref|ZP_20868512.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 53-407]
 gi|445186965|ref|ZP_21399424.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 20037]
 gi|445232321|ref|ZP_21406026.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE10]
 gi|445330622|ref|ZP_21413902.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 18569]
 gi|445347864|ref|ZP_21419449.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 13-1]
 gi|445368617|ref|ZP_21425793.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. PT23]
 gi|254788648|sp|B5R3R9.1|FADJ_SALEP RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|205349589|gb|EDZ36220.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709609|emb|CAR33954.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|395988184|gb|EJH97345.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 640631]
 gi|395991464|gb|EJI00588.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 622731-39]
 gi|395992565|gb|EJI01677.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 639016-6]
 gi|396003964|gb|EJI12948.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 77-0424]
 gi|396004517|gb|EJI13499.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607307-6]
 gi|396006792|gb|EJI15754.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 485549-17]
 gi|396019513|gb|EJI28369.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 596866-22]
 gi|396019729|gb|EJI28580.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 629164-26]
 gi|396020296|gb|EJI29141.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 596866-70]
 gi|396031696|gb|EJI40422.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 639672-50]
 gi|396033080|gb|EJI41795.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 629164-37]
 gi|396033397|gb|EJI42104.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 639672-46]
 gi|396038487|gb|EJI47126.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 77-2659]
 gi|396045783|gb|EJI54374.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 77-1427]
 gi|396046541|gb|EJI55125.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 78-1757]
 gi|396055485|gb|EJI63970.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 8b-1]
 gi|396059967|gb|EJI68414.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 22510-1]
 gi|396061364|gb|EJI69795.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648905 5-18]
 gi|396067736|gb|EJI76093.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 50-3079]
 gi|396069846|gb|EJI78176.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 6-18]
 gi|396075173|gb|EJI83449.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 58-6482]
 gi|434960933|gb|ELL54267.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CHS44]
 gi|434967561|gb|ELL60377.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1882]
 gi|434971730|gb|ELL64233.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1884]
 gi|434983504|gb|ELL75300.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1594]
 gi|434989156|gb|ELL80729.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1566]
 gi|434990907|gb|ELL82437.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1580]
 gi|434998734|gb|ELL89948.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1543]
 gi|435000302|gb|ELL91450.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1441]
 gi|435006243|gb|ELL97144.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1810]
 gi|435007185|gb|ELL98040.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE30663]
 gi|435008269|gb|ELL99095.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1558]
 gi|435014296|gb|ELM04873.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1018]
 gi|435021585|gb|ELM11953.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1010]
 gi|435028963|gb|ELM19023.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1729]
 gi|435031739|gb|ELM21694.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0895]
 gi|435041216|gb|ELM30959.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0899]
 gi|435042049|gb|ELM31781.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1457]
 gi|435044226|gb|ELM33923.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1747]
 gi|435055381|gb|ELM44793.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0968]
 gi|435056802|gb|ELM46172.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1444]
 gi|435060564|gb|ELM49811.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1445]
 gi|435069269|gb|ELM58271.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1565]
 gi|435071854|gb|ELM60791.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1559]
 gi|435072837|gb|ELM61742.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1808]
 gi|435080449|gb|ELM69130.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1455]
 gi|435084930|gb|ELM73485.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1811]
 gi|435086151|gb|ELM74696.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_0956]
 gi|435090086|gb|ELM78490.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1725]
 gi|435091844|gb|ELM80218.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1745]
 gi|435098801|gb|ELM87030.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1575]
 gi|435106236|gb|ELM94255.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1791]
 gi|435113107|gb|ELN00956.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CDC_2010K_1795]
 gi|435113274|gb|ELN01122.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 576709]
 gi|435122653|gb|ELN10166.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 635290-58]
 gi|435128615|gb|ELN15952.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607308-16]
 gi|435129359|gb|ELN16655.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607308-19]
 gi|435137525|gb|ELN24565.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607307-2]
 gi|435138959|gb|ELN25974.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 629163]
 gi|435140334|gb|ELN27297.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 607308-9]
 gi|435147597|gb|ELN34359.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE15-1]
 gi|435150735|gb|ELN37399.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_N202]
 gi|435158111|gb|ELN44522.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_56-3991]
 gi|435164278|gb|ELN50375.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_76-3618]
 gi|435166567|gb|ELN52540.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_81-2490]
 gi|435171798|gb|ELN57354.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SL913]
 gi|435176580|gb|ELN61947.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SL909]
 gi|435182022|gb|ELN67056.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 638970-15]
 gi|435184965|gb|ELN69867.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CVM_69-4941]
 gi|435187136|gb|ELN71939.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 13183-1]
 gi|435188546|gb|ELN73255.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 17927]
 gi|435196468|gb|ELN80800.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. CHS4]
 gi|435205218|gb|ELN88835.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 543463 22-17]
 gi|435220246|gb|ELO02543.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 561362 1-1]
 gi|435225853|gb|ELO07451.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 642044 4-1]
 gi|435227710|gb|ELO09170.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 642046 4-7]
 gi|435233706|gb|ELO14679.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648898 4-5]
 gi|435243161|gb|ELO23445.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 1-17]
 gi|435243258|gb|ELO23532.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648899 3-17]
 gi|435244540|gb|ELO24759.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648900 1-16]
 gi|435255149|gb|ELO34520.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648903 1-6]
 gi|435261870|gb|ELO41014.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648902 6-8]
 gi|435263059|gb|ELO42136.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 39-2]
 gi|435269084|gb|ELO47637.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 653049 13-19]
 gi|435286056|gb|ELO63391.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 648901 16-16]
 gi|435302436|gb|ELO78394.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 33944]
 gi|435306660|gb|ELO81928.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 76-2651]
 gi|435317648|gb|ELO90678.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 81-2625]
 gi|435326581|gb|ELO98393.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 62-1976]
 gi|435330947|gb|ELP02188.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 53-407]
 gi|444862539|gb|ELX87390.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE10]
 gi|444869231|gb|ELX93825.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 20037]
 gi|444876609|gb|ELY00774.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 13-1]
 gi|444877973|gb|ELY02104.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. 18569]
 gi|444882215|gb|ELY06206.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. PT23]
          Length = 715

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 276/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +  ++ +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|156933072|ref|YP_001436988.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter sakazakii ATCC BAA-894]
 gi|166972672|sp|A7MH81.1|FADJ_ENTS8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|156531326|gb|ABU76152.1| hypothetical protein ESA_00882 [Cronobacter sakazakii ATCC BAA-894]
          Length = 717

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 180/554 (32%), Positives = 279/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K GL+D VV    LL+     A ++A +R+P  R L   ++L  G 
Sbjct: 167 MILAGKQLRPRQALKAGLVDDVVPQSILLEA----AAELAKKRRPAPRRLPVRERLLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           +  A     + +   +KT  N P  Q  +DV+  G+  G  SG   EA+ F EL M   S
Sbjct: 223 IGRALLFRMVTQKTHQKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPES 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
             L  +FFA   T+++   T     PR +  V V+GGGLMG GIA        + V +K+
Sbjct: 283 AALRGLFFA---TTELKKETGSEAAPRALHSVGVLGGGLMGGGIAYVTATKARLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           ++ + +   +K     +   V R  L   + +  + ++    DY  F   D+V+EAV E 
Sbjct: 340 ISEKGINHALKYSWDLLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +E+E    PH I A+NTS++ +  +    +  +++IG H+FSP   MPL+E+
Sbjct: 400 LTLKQNMVAEIEAHTAPHTIFASNTSSLPIGDIAAGATRPEQVIGLHYFSPVDKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSA+ I   + + K   K P+VV +C GF VNR   PY   A   +  G  + +I
Sbjct: 460 IPHAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+   G P+GP QLLD  G  V        ++A+  R F +P   V  +L   R G+ 
Sbjct: 520 DEALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + SK + DP+V  +I        + PGGK   ++ +EI E  +  ++N
Sbjct: 579 NGRGFYLYPAKGRKSKKQVDPAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+EG+V  A D D  +V G+ FP + GG   + D +GA  + T+L + +  YG+ 
Sbjct: 629 EAARCLDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAAMATTLTRLATRYGDR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L   A  G
Sbjct: 689 FTPCDRLLRMAQTG 702


>gi|418856693|ref|ZP_13411335.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19593]
 gi|392819202|gb|EJA75075.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19593]
          Length = 715

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 174/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + E  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRAREALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|107102564|ref|ZP_01366482.1| hypothetical protein PaerPA_01003628 [Pseudomonas aeruginosa PACS2]
          Length = 696

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 274/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWA-------LDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+L   +   A       LD  ARR+P +  L    KL +
Sbjct: 153 KENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL----KLNA 208

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 209 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSVA 268

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V+  AV+G G+MG GIA    L    +++K++
Sbjct: 269 QSLIGLFLNDQELKKKAKKYDEVAKD--VKLAAVLGAGIMGGGIAYQSALKGTPILMKDI 326

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  + Y +F +VD+V+EAV+E+ 
Sbjct: 327 REEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVENP 386

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E A     I+A+NTSTI ++++ +     +   G HFF+P H+MPL+E++
Sbjct: 387 KVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVI 446

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+T    I   +   K + K P+VV +C GF VNR  FPY      L+S GVD  RID
Sbjct: 447 RGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVRID 506

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L D+ G            + FPDR        VD++ ++ R G+ N
Sbjct: 507 KVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKN 566

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    DP       PI+ E R             VT+++IV  ++ 
Sbjct: 567 GKGFYAYETDKRGKPKKVTDPQAYEVLKPIVVEQRE------------VTDEDIVNFMMI 614

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         K+++L
Sbjct: 615 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAEL 674

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 675 -GALYHPTAKLREMAKNG 691


>gi|419278869|ref|ZP_13821115.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10E]
 gi|419376283|ref|ZP_13917307.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14B]
 gi|419381621|ref|ZP_13922571.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14C]
 gi|378127570|gb|EHW88958.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC10E]
 gi|378219006|gb|EHX79275.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14B]
 gi|378227264|gb|EHX87436.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14C]
          Length = 714

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|380027011|ref|XP_003697230.1| PREDICTED: LOW QUALITY PROTEIN: trifunctional enzyme subunit alpha,
           mitochondrial-like [Apis florea]
          Length = 765

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 160/476 (33%), Positives = 249/476 (52%), Gaps = 17/476 (3%)

Query: 74  KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133
           KKT    P     LDVI  G+  G   G   EAK F EL +    +GL+++FF Q    K
Sbjct: 294 KKTGGLYPAPLKILDVIRIGLDKGSKVGYEAEAKAFGELAITPQCKGLINLFFGQTTCKK 353

Query: 134 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 193
                  G+    V+K+AV+G GLMG+GI    I  +  V++K+ N   L +G+  I+  
Sbjct: 354 ----NRFGVPKNAVKKIAVVGAGLMGAGIVQVSIDKDFDVIIKDTNETALYRGVNQIQKG 409

Query: 194 VRGLVTRGK-LTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
           +   V +   L+  + N  L  L   LDY+ FK+ D+VIEAV E + +K K+  E+E   
Sbjct: 410 MDAAVKKKNILSYLQKNKYLSKLDSTLDYTSFKNADIVIEAVFEDITIKHKVIKEIEANT 469

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
           P +C+LATNTS I +N +   ++  D++IG H+FSP   M LLEI+  + TS + I   +
Sbjct: 470 PNYCVLATNTSGISINEIAAGSNRPDKVIGMHYFSPVDKMQLLEIITHKGTSTETIKTAV 529

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            VG    K  ++VG+  GF   R        A  L+  GVD   +D+  + FG P+G   
Sbjct: 530 DVGLKQGKTIIIVGDGPGFYTTRVLSALLSEAIRLMQEGVDPIDLDNLTKKFGFPVGAAT 589

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKANGKGLYTYEKGSKP 429
           L D  G  V A  S    KA  +R F S  +++L   +K+G  G+ +GKG+Y YE   K 
Sbjct: 590 LSDEVGIDVGAHISAYLVKALGER-FNSGDINILNDMVKAGFLGRKSGKGIYIYETNVKN 648

Query: 430 KP-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 488
           +  + S L I+++ +    + P G   S+ ++++  +  F  VNE+   LEE I+    +
Sbjct: 649 RNINLSALDILKKYK----LEPKGST-SIEDRQLRMVSRF--VNEAILCLEENILANPLE 701

Query: 489 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
            D  +V G+ FP + GG   W D+ GA+ +   ++++   YG+ FKP + L + A+
Sbjct: 702 GDIGAVFGLGFPPFTGGPFRWVDSYGADKLVKKMEEFQNHYGDAFKPCQTLYDMAS 757


>gi|392983259|ref|YP_006481846.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa DK2]
 gi|419756485|ref|ZP_14282835.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PADK2_CF510]
 gi|384397216|gb|EIE43629.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PADK2_CF510]
 gi|392318764|gb|AFM64144.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa DK2]
          Length = 715

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 274/559 (49%), Gaps = 36/559 (6%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWA-------LDIAARRKPWIRSLHRTDKLG 57
            K   +E+  K+G +DAVV  E+L   +   A       LD  ARR+P +  L    KL 
Sbjct: 171 GKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL----KLN 226

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           ++ +           A +  PN P     +  I++    G    +  EA  F +L     
Sbjct: 227 AIEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSV 286

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           ++ L+ +F   +   K     D   K   V+  AV+G G+MG GIA    L    +++K+
Sbjct: 287 AQSLIGLFLNDQELKKKAKKYDEVAKD--VKLAAVLGAGIMGGGIAYQSALKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      +   V +G+LT  K   AL  ++  + Y +F +VD+++EAV+E+
Sbjct: 345 IREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIIVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E A     I+A+NTSTI ++++ +     +   G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E+T    I   +   K + K P+VV +C GF VNR  FPY      L+S GVD  RI
Sbjct: 465 IRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L D+ G            + FPDR        VD++ ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   + KP    DP       PI+ E R             VT+++IV  ++
Sbjct: 585 NGKGFYAYETDKRGKPKKVTDPQAYEVLKPIVVEQRE------------VTDEDIVNFMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         K+++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAE 692

Query: 528 LYGNFFKPSRFLEERATKG 546
           L G  + P+  L E A  G
Sbjct: 693 L-GALYHPTAKLREMAKNG 710


>gi|330829737|ref|YP_004392689.1| Fatty oxidation complex subunit alpha [Aeromonas veronii B565]
 gi|406677017|ref|ZP_11084202.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
           AMC35]
 gi|423209569|ref|ZP_17196123.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
           AER397]
 gi|328804873|gb|AEB50072.1| Fatty oxidation complex, alpha subunit [Aeromonas veronii B565]
 gi|404617427|gb|EKB14363.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
           AER397]
 gi|404625331|gb|EKB22148.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
           AMC35]
          Length = 716

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 186/566 (32%), Positives = 284/566 (50%), Gaps = 42/566 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RT 53
           +ML  K + +++  KLGL+D VV    LL      A+ +A + KP     R L      T
Sbjct: 167 LMLTGKQVRAKQAKKLGLVDDVVPPSILLDA----AIKLAKKGKPRHQLKRDLQGKVLET 222

Query: 54  DKLGSLSEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKE 111
           +KLG     R+VL  + ++    KT  N P  +  LDV+  G+  G  +G++ E++ F E
Sbjct: 223 NKLG-----RKVLFDQASKGVKAKTRGNYPAPERILDVVRIGVEEGMKAGLVAESRHFGE 277

Query: 112 LVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNN 170
           LVM   S  L  +FFA     K   VT  G +PR V   AV+GGGLMG GIA        
Sbjct: 278 LVMTAESAALRSIFFATTEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAG 335

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
           + V +K+V S  +   ++     +   + R  + + +    + +L G LDYS F  VDMV
Sbjct: 336 VPVRIKDVASAGIGNAMRYSYDILAKKLKRRHILRSELEKQMSLLTGTLDYSGFHRVDMV 395

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           +EAV E + LK ++  ++E  C  H + A+NTS++ +N +  + +  +R++G H+FSP  
Sbjct: 396 VEAVFEDLALKHQMVKDVEHECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVD 455

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350
            MPL EI+    TSA+ +   +   +   K P+VV +  GF VNR   PY   A  LV  
Sbjct: 456 KMPLAEIIPHAGTSAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLE 515

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKS 409
           G  V  +DSA+  FG P+GP  LLD  G  V A  S   +K      FQ+P   D LL++
Sbjct: 516 GEPVEVLDSALLDFGFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQN 575

Query: 410 GRNGKANGKGLYTYEKGS----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
            R G+ NGKG Y Y K +          K   D SV  ++        I P  K   +  
Sbjct: 576 DRKGRKNGKGFYLYGKAAPRNKLTGKEGKKTVDESVYGVL-------GIKPSAK---LAR 625

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EI E  +  ++NE+   L+ G+V  A D D  ++ G+ FP + GG   + D +G +++ 
Sbjct: 626 QEIAERCVLLMLNEAAMALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDTLGIDHLV 685

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATK 545
             L+ + + +G+ F P   L+  A +
Sbjct: 686 GRLEYYQKRHGDRFAPCARLKAMAAE 711


>gi|444910089|ref|ZP_21230277.1| Enoyl-CoA hydratase [Cystobacter fuscus DSM 2262]
 gi|444719687|gb|ELW60479.1| Enoyl-CoA hydratase [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 166/474 (35%), Positives = 249/474 (52%), Gaps = 11/474 (2%)

Query: 74  KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133
           KKT    P  +  L+ I  G+  G  +G+  EA++F ELV+ D S+ LV +FFA  A  K
Sbjct: 277 KKTRGKFPAPEKALEAIRVGLESGRAAGLEAEARLFGELVVSDVSKRLVEIFFATTALKK 336

Query: 134 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKEVNSEYLLKGIKTIEA 192
                   +K R V+KV V+GGGLMG GIA  +  L  + V +K+ +   + + +K ++ 
Sbjct: 337 ENGTDKADVKARPVKKVGVLGGGLMGGGIAYVSSALQGVPVRVKDKDDAGVGRALKQVQG 396

Query: 193 NVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKAC 252
                V R  LT  +A   + ++ G  DYS FK+VD+VIEAV E + LK++I  E+E   
Sbjct: 397 IFEERVKRRSLTSREAAAKMALVTGGTDYSGFKNVDVVIEAVFEDLTLKRRILGEVEAVT 456

Query: 253 PPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 312
              CI A+NTS+I +  + E      +IIG H+FSP H MPLLEI+  + T+  V    +
Sbjct: 457 REDCIFASNTSSIPITQLAEGARRPAQIIGMHYFSPVHKMPLLEIITHKGTADWVTATCV 516

Query: 313 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQ 372
            +GK   K  +VV +  GF  +R   PY   A  L++ G D+  +D A+  FG P+GP  
Sbjct: 517 EIGKKQGKTVIVVNDGPGFYTSRILAPYMNEAAYLLAEGADIAELDRALVEFGFPVGPIT 576

Query: 373 LLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPD 432
           LLD  G  VA   +   + AF  R       D ++  GR G+ N KG YTY+ G K + D
Sbjct: 577 LLDEVGIDVAQKVAPIMEAAFGKRIAAPKAFDKVVADGRLGRKNKKGFYTYD-GKKKEVD 635

Query: 433 PSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 492
            SV  ++   R   ++           +E+ E     +VNE+ R L EGI+  A D D  
Sbjct: 636 TSVYELLPHGRERKHL---------DAQEMAERCALQMVNEAVRCLGEGILRSARDGDVG 686

Query: 493 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 546
           ++ G+ FP++ GG   +AD++G   +   L+ +   YG  F+P+  L E+   G
Sbjct: 687 AIFGLGFPAFLGGPFRYADSLGPAELLRRLEHYHDKYGERFEPAPALVEKVKAG 740


>gi|445170469|ref|ZP_21395717.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE8a]
 gi|444862382|gb|ELX87238.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. SE8a]
          Length = 715

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 277/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA  +  + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTACKVG-LPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +  ++ +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|224157637|ref|XP_002198586.1| PREDICTED: peroxisomal bifunctional enzyme-like, partial
           [Taeniopygia guttata]
          Length = 459

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 160/439 (36%), Positives = 226/439 (51%), Gaps = 29/439 (6%)

Query: 66  LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
           L+ A ++ KK A      + C   +          GV +E ++F+ L+    +R L + F
Sbjct: 23  LREALVKVKKQARGCLAPELCFQAVRAAAERPFAEGVRRERELFQVLLTSGQARALQYAF 82

Query: 126 FAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
           FA+RA  +    +        P+ VRK AVIG G MG GI T+ +  NI +V  E + EY
Sbjct: 83  FAERAVRRWDTPSGASWSSAAPQPVRKAAVIGLGTMGRGIVTSLVKANIPLVALEQDLEY 142

Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKM-----LKGVLDYSEFKDVDMVIEAVIES 237
           L KG K +      L+ R  +  ++   AL       L+  +D+    DVD+VIEAV E+
Sbjct: 143 LNKGRKAVML----LLEREAMKMERGAQALDFHNPARLQFTVDFDLLHDVDLVIEAVFEN 198

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LK++IF +L K C P  +L TNTS ++++ +   TS   ++IG HFFSPAHVM LLEI
Sbjct: 199 MALKKEIFHKLSKICKPGALLCTNTSALNIDEIASATSCPQQVIGTHFFSPAHVMRLLEI 258

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS   I   M + K +KKV VVVGNC GF  NR  FPY Q A  L+  G     +
Sbjct: 259 IYGRHTSPTAIATAMQLAKALKKVGVVVGNCFGFVGNRMMFPYVQQAVFLLEEGSRPEAV 318

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKE-------FDKAFPDRSFQ----SPLVDLL 406
           D  +  FG  +GPF++ DLAG  V   + K+            P R  Q    SPL DLL
Sbjct: 319 DQVLEDFGFKLGPFRMSDLAGLDVGWRSRKDQGLTGPSLPAGTPARQRQGQRYSPLPDLL 378

Query: 407 LKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 464
            + GR G+  GKG Y YE+  G    PDP +   +   R   +I    K   + ++EI+E
Sbjct: 379 CEQGRFGQKTGKGWYQYERAGGRTATPDPWLHSFLSHYRDTHHI----KTRFIDQEEILE 434

Query: 465 MILFPVVNESCRVLEEGIV 483
             LF ++NE   +L EGI 
Sbjct: 435 RCLFSLINEGFAILAEGIA 453


>gi|452045|gb|AAA53289.1| enyol-CoA: hydratase/3-hydroxyacyl-CoA dehydrogenase [Homo sapiens]
          Length = 723

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 179/569 (31%), Positives = 286/569 (50%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D VV S   EE ++ + R+    + +RR   KP I+SL   D +  
Sbjct: 156 RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA  +LK+ R       P     +AC+  ++  + +    G+ KE ++F  L+    +
Sbjct: 213 FSEA--LLKMRRQH-----PGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA+R  +K    +    K    R V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIG 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV 
Sbjct: 326 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G    
Sbjct: 444 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   +   R+  +I    +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSRYRKPHHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+ R+L EGI      +D   + G     ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGCARHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|390567210|ref|ZP_10247558.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
 gi|389940910|gb|EIN02691.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia terrae BS001]
          Length = 706

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 286/552 (51%), Gaps = 8/552 (1%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML  + + ++E   LGL+D V  ++++L     +   +   + P +R     D L   +
Sbjct: 157 LMLSGRHVGAKEAHALGLVDLVGETDDVLAEGLAYVQALLDAQAP-VRRTRDADGLADRA 215

Query: 61  EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
            +R  ++ AR ++ K +  +      +D ++  +      G+  E ++F + +      G
Sbjct: 216 ASRAAIEAARAESSKKSHGLFSPLKIVDAVQAALELPFDDGLRHERQLFLQCLDSPQRAG 275

Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
           L+H F A+R   K P   +   KPR +  V V+GGG MG+GIA A +   + V + E + 
Sbjct: 276 LIHAFLAEREVLKAPETRNA--KPRKIASVGVVGGGTMGAGIAVAVLDAGLPVTMIERDD 333

Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
             L +G+  IE     L+ +G++T +     L    G   Y      D+VIEAV E + +
Sbjct: 334 VSLARGLAHIEKVYDNLIAKGRMTPEAKAAVLARWNGSTSYDALGTADLVIEAVFEEMTV 393

Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
           K  +F++L++ C P  +LATNTS +D++ +    S    ++G HFFSPA++M LLE+V  
Sbjct: 394 KHAVFAKLDRVCKPGAVLATNTSYLDIDAIAASVSRPGDVVGLHFFSPANIMKLLEVVVP 453

Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
            + SA V+     + K ++KVPV  G C GF  NR    Y  +A  ++  G   ++ID A
Sbjct: 454 AQVSADVVATAFDLAKKLRKVPVRAGVCDGFIGNRVLAIYRAAADHMMEDGASPYQIDRA 513

Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
           +R+FG P+GPFQ+ DLAG  +  AT K        +     + D + + G  G+  G+G 
Sbjct: 514 VRAFGFPMGPFQVADLAGGDIGWATRKRRAATRDPQQRYVQIADRICERGWFGQKTGRGY 573

Query: 421 YTYEKGSKP-KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLE 479
           Y Y  G++  KPDP V  II+  R  + + P     + +++EI+   +  ++NE   V+ 
Sbjct: 574 YVYADGARTGKPDPEVESIIDAERERAGVTPR----AFSDEEIMRRYMAAMINEGANVVH 629

Query: 480 EGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 539
           + I +R  D+D   + G  FP +RGG + +AD VG + V   +++++Q    F++PS  +
Sbjct: 630 QRIALRPLDVDVTFLYGYGFPRHRGGPMQYADTVGLDKVLADIREFAQQDPVFWQPSPLI 689

Query: 540 EERATKGIPLSA 551
            +   +G  L++
Sbjct: 690 VDLVERGATLAS 701


>gi|205353501|ref|YP_002227302.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|375124344|ref|ZP_09769508.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. SG9]
 gi|445134084|ref|ZP_21382767.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9184]
 gi|254788647|sp|B5RCL3.1|FADJ_SALG2 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|205273282|emb|CAR38247.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628594|gb|EGE34937.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. SG9]
 gi|444847013|gb|ELX72164.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9184]
          Length = 715

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +  ++ +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINKAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG K K   DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|66519936|ref|XP_393806.2| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
           [Apis mellifera]
          Length = 764

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 176/570 (30%), Positives = 284/570 (49%), Gaps = 40/570 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV--------TSEE-LLKVSRLWALDIAARRKPWIRSLH 51
           M+L  K + + +  K+GL+D +V        TSEE  ++     A+ +A         ++
Sbjct: 201 MILTGKQVKAIKAKKIGLVDLLVNCLGCGIGTSEENTMRYLEETAIKVAQDITNKTLKIN 260

Query: 52  RTDKLGSLSEA------------REVLKLARLQAK-KTAPNMPQHQACLDVIEEGIVHGG 98
           R  K  +LS+              +V  LA+ + K KT    P     LDV+   +    
Sbjct: 261 RDSK--TLSDKFMNYVLHFDFVKDQVFNLAKEKVKQKTGSLYPAPFKILDVMRISLNKES 318

Query: 99  YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLM 158
             G   EAK F EL +    +GL ++FF Q    K       G+    V+K+AV+G GLM
Sbjct: 319 KLGYEAEAKAFGELGVTPQCKGLTNLFFGQTTCKK----NRFGVPKNAVKKIAVVGAGLM 374

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G+GI    I  +  V++K+ N   L +G+  ++  +   V + K +  + +     L   
Sbjct: 375 GAGIVQVSIDKDFDVIMKDTNETALYRGVNQVQKGMHAAVKKKKYSNFQKDRYFSKLDST 434

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           LDYS FK+ D+VIEAV E + +K K+  E+E+  P +C+LATNTS I +N +   ++  D
Sbjct: 435 LDYSSFKNADIVIEAVFEDITIKHKVIKEIEENTPNYCVLATNTSAISINEIAAGSNRPD 494

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
           +IIG H+FSP H M LLEI+  + TS + I   + VG    K  ++VG+  GF   R   
Sbjct: 495 KIIGMHYFSPVHKMQLLEIITHKGTSTETIKTAVDVGLKQGKTIIIVGDGPGFYTTRILS 554

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
                A  L+  GVD   +D+  + FG P+G   L D  G  V A  S    K   +R F
Sbjct: 555 ALLSEAIRLMQEGVDPIYLDNLTKKFGFPVGAATLSDEVGIDVGAHISTYLVKELGER-F 613

Query: 399 QSPLVDLL---LKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKP 454
               +++L   +K+G  G+ +GKG+YTYE   K K  +   L I+++ +    + P G  
Sbjct: 614 HGGDINILNDMVKAGFLGRKSGKGIYTYETNVKNKNVNLLALDILKKYK----LEPKGNT 669

Query: 455 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 514
            ++ ++++  +  F  VNE+   LEE I+    + D  +V G+ FP + GG   W D+ G
Sbjct: 670 -TIEDRQLRMVSRF--VNEAILCLEENILANPLEGDIGAVFGLGFPPFTGGPFRWVDSYG 726

Query: 515 ANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
           A+ +   ++++   YG+ FKP + L + A+
Sbjct: 727 ADNLVRKMEEFQNHYGDAFKPCQTLYDMAS 756


>gi|238895854|ref|YP_002920590.1| multifunctional fatty acid oxidation complex subunit alpha
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|402779645|ref|YP_006635191.1| enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae 1084]
 gi|238548172|dbj|BAH64523.1| 3-hydroxyacyl-CoA dehydrogenase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|402540582|gb|AFQ64731.1| Enoyl-CoA hydratase [Klebsiella pneumoniae subsp. pneumoniae 1084]
          Length = 714

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 180/557 (32%), Positives = 283/557 (50%), Gaps = 31/557 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML  K +   +  K GL+D VV    LL+     A+++A + +P  R +   +++ +  
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222

Query: 61  EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R +L   + +   +KT  N P  +  L V+E G+ HG  SG  +EA+ F EL M   S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVL 175
           + L  +FFA     K     D G +  P  +R VAV+GGGLMG GIA        + V +
Sbjct: 283 QALRSIFFASTDLKK-----DRGAEAEPAPLRSVAVLGGGLMGGGIAYVTACKGGLPVRI 337

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++    +   +K     +   V + +L   + +  + ++ G  DY  F   D+VIEAV 
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVF 397

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ SE+E+   P  I A+NTS++ +  +    S   ++IG HFFSP   MPL+
Sbjct: 398 EDLALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAVHASRPGQVIGLHFFSPVEKMPLV 457

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++  + T  Q I  ++ + K   K P+VV +  GF VNR   PY   A  L+  G  + 
Sbjct: 458 EVIPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIE 517

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNG 413
            ID+A+  FG P+GP QLLD  G           + AF +R F  P  ++D +LK  R G
Sbjct: 518 VIDNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKG 576

Query: 414 KANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS-VTEKEIVEMILFP 469
           + N +G Y YE   + SK +PDP+V P++            G+P S ++ +++ E  +  
Sbjct: 577 RKNNRGFYLYETKGRKSKKRPDPAVYPLLGI----------GRPQSRLSAQQVAERCVMM 626

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE+ R  +E I+  A D D  +V G+ FP + GG   + D +GA  V   L++ +  +
Sbjct: 627 MLNEAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQF 686

Query: 530 GNFFKPSRFLEERATKG 546
           G  F P   L   A +G
Sbjct: 687 GPRFTPCDTLLRMAEQG 703


>gi|222157091|ref|YP_002557230.1| Fatty acid oxidation complex subunit alpha [Escherichia coli LF82]
 gi|387617698|ref|YP_006120720.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|222034096|emb|CAP76837.1| Fatty acid oxidation complex subunit alpha [Escherichia coli LF82]
 gi|312946959|gb|ADR27786.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O83:H1 str. NRG 857C]
          Length = 714

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++  +I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYLLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702


>gi|406832259|ref|ZP_11091853.1| multifunctional fatty acid oxidation complex subunit alpha
           [Schlesneria paludicola DSM 18645]
          Length = 710

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 259/543 (47%), Gaps = 12/543 (2%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           M+   + + + +   +GLI   V  E+L+     + +D A R   W     R ++   LS
Sbjct: 163 MITSGEPVDARKAIDIGLIYDAVPVEKLI-AEATYLIDEAHRTGEWTALRQRRNQPLGLS 221

Query: 61  EAREVLKLARLQAK---KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           E +        +     KT    P     L  I +GI      G++ E   F+E+     
Sbjct: 222 EDQFNFAFGVAEGAVKGKTRGQYPAPLVALKAIRDGINRPLEEGLVIEQAAFREVGSTTI 281

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           +  L+  FF     ++   V D  ++PR ++ V V+G GLMG+GIATA     +   + +
Sbjct: 282 AANLIAQFFNNTRLARESGVDDRTVQPRSIQNVGVLGAGLMGAGIATACARRGVRATMVD 341

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           V++  +  G+K     V   +   + T     + L  L        F + D+V+EAV E+
Sbjct: 342 VDAARVELGMKNARRVVEDRIAIHRATSSDLADMLSRLTATTSRQSFSECDLVVEAVTEN 401

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             LK +I  E  K   P  + A+NTSTI +  + +     +   G HFFSP   M L+E+
Sbjct: 402 EKLKTQIIEECAKVVRPDALFASNTSTISITRLAKAWPQPESFAGLHFFSPVDRMQLVEV 461

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           VR E+TS + ++ L+ + K I K P+VV +C GF VNR   PY   A +L+  GVD+ RI
Sbjct: 462 VRGEKTSDEAVVSLVALAKKIGKTPIVVRDCPGFLVNRILMPYMAEALVLLEEGVDMDRI 521

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D     +G+P+GP  L D+ G        +     + DR+  +P++  L++ GR GK +G
Sbjct: 522 DKIATKWGMPVGPITLYDMVGIDTGLYAGQVLQAGYADRAVATPILAQLVELGRLGKKSG 581

Query: 418 KGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477
           KG    +K  K   DP V  +I    R++      K   +++ ++ + +   +  E+ R 
Sbjct: 582 KGFRGVDKKGKFVADPEVQQLI--AHRVT------KKSELSDDDVADRLFLCMALEAIRA 633

Query: 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSR 537
           L + I  +  D+D A +LG++FP++RGG + W D  GA  +    KKW  L   F  P+ 
Sbjct: 634 LSDKIARQPGDIDMAMILGVNFPAFRGGPLRWCDTEGAAKIAERSKKWESLGHRFDVPAA 693

Query: 538 FLE 540
             E
Sbjct: 694 LAE 696


>gi|297621495|ref|YP_003709632.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
           chondrophila WSU 86-1044]
 gi|297376796|gb|ADI38626.1| Fatty acid oxidation complex, alpha subunit FadB [Waddlia
           chondrophila WSU 86-1044]
 gi|337293681|emb|CCB91668.1| Fatty acid oxidation complex subunit alpha [Waddlia chondrophila
           2032/99]
          Length = 714

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 282/552 (51%), Gaps = 23/552 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI-AARRKPWIRSLHRTDKLGSL 59
           M+L  + + +++ +K+ L DA+  SE + + +  +  +I  ++ K  +    ++  L SL
Sbjct: 166 MVLTGRPVDAKKAFKIHLADAIFPSEFMKEKTDAFVEEILTSKGKEKVLERRKSRGLMSL 225

Query: 60  SEAREVLKLA-------RLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL 112
              R  +  A       R   +KT    P   A LD+I+         G+ KE + F + 
Sbjct: 226 LFERNPIGRAFVFWQSRRSVLQKTKGQYPSPLAALDLIQNTYTMPLKKGLKKEVEAFVKS 285

Query: 113 V--MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNN 170
           +      +  L+++FF      K P +       + V+ V V+G G+MGSGIA      +
Sbjct: 286 MSGAFQCAPNLIYIFFNSEQMKKDPGMIGGQATGKEVKSVGVLGAGVMGSGIAWLMSYRD 345

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
           + V +K+VN + +  G K+     + L+ + KL   +AN    ++ G +DY+ F  +D V
Sbjct: 346 LPVRMKDVNWKAVGSGFKSAWDTYKVLIKKRKLKPAQANRKFHLISGTIDYTGFDKLDFV 405

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           IEA +E++ LK KI  ELE    P  I+ATNTS++ ++ +       +R++G HFF+P  
Sbjct: 406 IEAAVENLELKHKILKELEANVRPDAIIATNTSSLTIDELAPALKHPERLVGMHFFNPPA 465

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF-FPYSQSARLLVS 349
            MPL+EIV  E+TS + +  +  + + +KK PVVVG+C+GF VNR F   + +  R+L  
Sbjct: 466 RMPLVEIVSGEKTSPEAVQTVFELCQRLKKTPVVVGDCSGFLVNRVFAHGFVEIMRMLEE 525

Query: 350 LGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKS 409
            GV   R+D     FGLP+ PF L D  G  V     K F+ A+  R     L++ L + 
Sbjct: 526 -GVPQERLDKLFLKFGLPMAPFVLADEIGNDVNLKAMKSFESAYGIRMEVPKLLEKLNEK 584

Query: 410 GRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
              G+  GKG Y Y+K SK K +P +          ++ +P    +++++ + ++ ++  
Sbjct: 585 QLYGRKVGKGFYIYDKKSK-KINPEI----------TSFLPHQNGMNISDTDAIDRVMLA 633

Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
           ++NE+ R L+E ++     LD A V G+ FP +RGG++ +AD++G   +          Y
Sbjct: 634 MINEAARCLQENVIHNPGYLDMALVFGVGFPPFRGGLLRYADSIGIEKLMDKYGHLVSTY 693

Query: 530 GNFFKPSRFLEE 541
           G  F P   L+E
Sbjct: 694 GERFVPCEKLKE 705


>gi|57110042|ref|XP_545234.1| PREDICTED: peroxisomal bifunctional enzyme [Canis lupus familiaris]
          Length = 723

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 178/572 (31%), Positives = 285/572 (49%), Gaps = 49/572 (8%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + + ++E  KLG++D +V S   EE +K++ R+    + +RR   KP          + S
Sbjct: 156 RHVLADEALKLGILDEIVNSDPVEEAIKLAQRISDQSLESRRLCNKP----------IQS 205

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDT 117
           L     +   A L+ +K  P     + C+  ++   VH  Y  G+ KE ++F  L     
Sbjct: 206 LPNMESIFSEALLKMQKQHPGCLAPETCVRAVQAA-VHCPYEVGIQKEKELFMYLQKSGQ 264

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVV 174
           +R L + FFA+R  +K    +    K    + +  V V+G G MG GI  +     I V+
Sbjct: 265 ARALQYAFFAERNATKWSTPSGASWKTAIAQPISSVGVVGLGTMGRGIVVSLAKAKIPVI 324

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--EFKDVDMVIE 232
             E +     K ++T +  +  L+ +      ++++     K  L  S  E   VD+VIE
Sbjct: 325 AVESDK----KQLETADMIITTLLEKEASKMQRSSHPSLGPKPRLTTSMKELGGVDLVIE 380

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM
Sbjct: 381 AVFEEINLKKRVFAELSAICKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVM 440

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLEI+ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY      L+  G 
Sbjct: 441 KLLEIIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLKPYYNQTYFLLEEGS 500

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQS 400
               ID  +  FG  +GPF++ DLAG  V   + +      P            +R +  
Sbjct: 501 RPEEIDQVLEEFGFKMGPFRVSDLAGLDVGWKSRQGQGLTGPMVPSGTPARKRGNRRY-C 559

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
           P+ DLL +SGR G+  GKG Y Y+K  G   KPDP +   + + R+  +I    +P  ++
Sbjct: 560 PIPDLLCESGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRKTYHI----EPRIIS 615

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           + EI+E  L+ ++NE+ R+L EG+      +D   + G  +P +RGG +F+A  VG   V
Sbjct: 616 QDEILERCLYSLINEAFRILGEGMATDPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPTV 675

Query: 519 YTSLKKWSQLYGNF--FKPSRFLEERATKGIP 548
              L+K+ +   +    +P  +L++ A+ G P
Sbjct: 676 LEKLQKYYRQNPDIPQLEPCDYLKKLASLGNP 707


>gi|398994041|ref|ZP_10696968.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM21]
 gi|398133282|gb|EJM22496.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM21]
          Length = 715

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 276/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYE--KGSKPK--PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE  K  K K   DPSVL    PI+ E R             V++++I+  ++ P+  E
Sbjct: 591 AYETDKHGKQKKVADPSVLEVLKPIVYEQRE------------VSDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKNG 710


>gi|226943562|ref|YP_002798635.1| multifunctional fatty acid oxidation complex subunit alpha
           [Azotobacter vinelandii DJ]
 gi|226718489|gb|ACO77660.1| fatty acid oxidation complex alpha subunit FadB [Azotobacter
           vinelandii DJ]
          Length = 715

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 169/558 (30%), Positives = 278/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   + E  K+G  DAVV  E       +LLK +    LD  ARR+P +  L    KLG+
Sbjct: 172 KENGAAEALKVGAADAVVADERLREAALDLLKRAAAGELDFRARRQPKLEPL----KLGN 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  P+ P   A +  I++       + +  E   F +L     +
Sbjct: 228 IEQMMAFESAKAYVAAQAGPHYPAPLAAVKTIQKAANSAREAALEIEVGGFVKLAATTVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + LV +F  ++   +     D     R V++ AV+G G+MG GIA    L    ++LK++
Sbjct: 288 QSLVGLFLNEQELKRKARKYD--KDAREVKQAAVLGAGIMGGGIAYQSALKGTPILLKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E + +G+   +  +   V +G+LT  +    L  ++  L Y +F  VD+V+EAV+E +
Sbjct: 346 REESIRQGLAEADKQLAKRVEKGRLTVGQMAEVLNGIRPTLSYGDFPQVDLVVEAVVERL 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E   P   ++A+NTSTI ++ + +      R  G HFF+P  +MPL+E++
Sbjct: 406 EVKQAVLAEVEAQVPGEAVIASNTSTISISRLADSLKRPQRFCGMHFFNPVPLMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R  +T  + I   +   + + K P+VV +C GF VNR  FPY      L++ G+D  RID
Sbjct: 466 RGRQTDERTIATTVAYARKMGKTPIVVNDCPGFLVNRVLFPYLAGFTRLLAAGIDFRRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ--SPLVDLLLKSGRNGKAN 416
             +  FG P+GP  LLD+ G   A        + +P+R  +     +D+LL++GR G+ +
Sbjct: 526 RVMEGFGWPMGPAYLLDVVGIDTAVHARNVLAEGYPERMKEEGDTAIDVLLRAGRLGQKS 585

Query: 417 GKGLYTYEK--GSKPK--PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           G G Y YE+  G+KPK   DP       P++ E   L +            +EIV  ++ 
Sbjct: 586 GSGFYAYERDGGAKPKKLEDPRAAELLGPLVRETGELDD------------EEIVARLML 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LEEGIV  A++ D   + G+ FP +RGG + + D +G         + + L
Sbjct: 634 PLCLEAVRCLEEGIVESAAEADMGLIYGIGFPPFRGGALRYIDTLGVARFVELADRHADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  ++P+  L E A +G
Sbjct: 694 -GPLYRPTEQLREMARQG 710


>gi|418860581|ref|ZP_13415157.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19470]
 gi|418865117|ref|ZP_13419632.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19536]
 gi|392826369|gb|EJA82097.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19470]
 gi|392829203|gb|EJA84884.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19536]
          Length = 715

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLSVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|389684613|ref|ZP_10175941.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           family protein [Pseudomonas chlororaphis O6]
 gi|388551836|gb|EIM15101.1| enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           family protein [Pseudomonas chlororaphis O6]
          Length = 703

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 175/560 (31%), Positives = 280/560 (50%), Gaps = 31/560 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWA---LDIAARRKP---WIRSLHR- 52
           ++L  + I +E    LG++D + +S E+LL  +  +A   ++  A  +P   W +     
Sbjct: 154 LILSGEQIDAERARMLGILDRIASSAEQLLDEACAYANELIECGAPARPAEAWPKPAEDL 213

Query: 53  -TDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKE 111
             D L       E    +RL  +     +    ACL  +EEG+         +E  +FK+
Sbjct: 214 PDDFLARYRAEHEPRWKSRLAPRLVLSAL--EAACLLPLEEGLA--------RELALFKQ 263

Query: 112 LVMLDTSRGLVHVFFAQRATSKVPNV-TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNN 170
                 S+ L HVFFA+R   +VP + +DI   PR + KVAVIG G +G+GIA +     
Sbjct: 264 AEASRQSKALRHVFFAERKAGRVPGIGSDI--TPRKLDKVAVIGAGPLGAGIAMSFADVG 321

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
           I V L E     L +G+  I    +  V  GK++  +    + +L G LDY +  D D+V
Sbjct: 322 IPVALLEPEGGALDRGLMQIRKLYQASVKHGKMSAAQLQQRMDLLFGTLDYEDLADADLV 381

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           IEA+ E   +K+++F  LE+ C P  ILAT+TS++D++ +         +IG HFFSPA+
Sbjct: 382 IEALYEKPGVKRQVFLSLEQVCKPGAILATSTSSLDIDAIAASLGRPQDVIGLHFFSPAN 441

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350
           VM L+E+VR + T+ +V+   M + K I K+PV+ G   G    R   PY++ A  LV  
Sbjct: 442 VMRLVEVVRGKATAPEVLASAMQIAKRIGKLPVISGAGQGAIGERMLEPYAREAHRLVLE 501

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSG 410
           G    ++DS +    L +G F +LDLAG  V+  T      A         +   L   G
Sbjct: 502 GATPAQVDSVLTGLDLNMGVFSMLDLAGIDVSFLTRDANRAATAHDQSYCCIAQELCALG 561

Query: 411 RNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
           R G+  G+G Y YE G   + D  V  + E+     ++       ++ + EI +  LF +
Sbjct: 562 RYGQKTGRGFYLYE-GQNRQEDYEVTALAEQLAGELDV----PRRAIEDLEIHDRCLFML 616

Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
           +NE  ++L+EGI +RASD+D   + G  FP++ GG + +A+ +G + V   +  + Q  G
Sbjct: 617 INEGIQLLDEGIALRASDIDLVWINGYGFPAHLGGPLHYAEQLGLDQVLCGILHYRQALG 676

Query: 531 NF----FKPSRFLEERATKG 546
            +    F+P+  LE     G
Sbjct: 677 EYGQMWFRPAALLERLVAAG 696


>gi|300822219|ref|ZP_07102361.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           119-7]
 gi|331669040|ref|ZP_08369888.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA271]
 gi|331678287|ref|ZP_08378962.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H591]
 gi|417223371|ref|ZP_12026811.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.154]
 gi|417269675|ref|ZP_12057035.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.3884]
 gi|423706373|ref|ZP_17680756.1| fatty acid oxidation complex subunit alpha [Escherichia coli B799]
 gi|432377503|ref|ZP_19620493.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE12]
 gi|432835317|ref|ZP_20068856.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE136]
 gi|300525349|gb|EFK46418.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           119-7]
 gi|331064234|gb|EGI36145.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           TA271]
 gi|331074747|gb|EGI46067.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli H591]
 gi|385712257|gb|EIG49212.1| fatty acid oxidation complex subunit alpha [Escherichia coli B799]
 gi|386203173|gb|EII02164.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           96.154]
 gi|386228480|gb|EII55836.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           3.3884]
 gi|430897909|gb|ELC20097.1| fatty acid oxidation complex subunit alpha [Escherichia coli KTE12]
 gi|431385677|gb|ELG69664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE136]
          Length = 714

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|300918485|ref|ZP_07135079.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           115-1]
 gi|432534611|ref|ZP_19771586.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE234]
 gi|300414345|gb|EFJ97655.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli MS
           115-1]
 gi|431060247|gb|ELD69581.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE234]
          Length = 714

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K     P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGNTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|423199920|ref|ZP_17186500.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
           AER39]
 gi|404621145|gb|EKB18035.1| fatty oxidation complex, alpha subunit FadJ [Aeromonas veronii
           AER39]
          Length = 716

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 186/566 (32%), Positives = 284/566 (50%), Gaps = 42/566 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKP---WIRSLH----RT 53
           +ML  K + +++  KLGL+D VV    LL      A+ +A + KP     R L      T
Sbjct: 167 LMLTGKQVRAKQAKKLGLVDDVVPPSILLDA----AIKLAKKGKPRHQLKRDLQGKVLET 222

Query: 54  DKLGSLSEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKE 111
           +KLG     R+VL  + ++    KT  N P  +  L+V+  G+  G  +G+  E++ F E
Sbjct: 223 NKLG-----RKVLFDQASKGVKAKTRGNYPAPERILEVVRIGVEEGMKAGLAAESRHFGE 277

Query: 112 LVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNN 170
           LVM   S  L  +FFA     K   VT  G +PR V   AV+GGGLMG GIA        
Sbjct: 278 LVMTAESAALRSIFFATTEMKK--EVTYQGAEPRKVAHAAVLGGGLMGGGIAFVTATKAG 335

Query: 171 IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMV 230
           + V +K+V S  +   ++     +   + R  + + +    + ML G LDYS F  VDMV
Sbjct: 336 VPVRIKDVASAGIGNAMRYSYDILAKKLKRRHILRSELEKQMSMLTGTLDYSGFHRVDMV 395

Query: 231 IEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH 290
           +EAV E + LK ++  ++E+ C  H + A+NTS++ +N +  + +  +R++G H+FSP  
Sbjct: 396 VEAVFEDLNLKHQMVKDVERECGEHTVFASNTSSLPINQIAAEAAHPERVVGLHYFSPVD 455

Query: 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350
            MPL EI+    TSA+ +   +   +   K P+VV +  GF VNR   PY   A  LV  
Sbjct: 456 KMPLAEIIPHAGTSAETVATTLAFARAQGKTPIVVKDEAGFYVNRILAPYMNEAARLVLE 515

Query: 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKS 409
           G  V  +DSA+  FG P+GP  LLD  G  V A  S   +K      FQ+P   D LL++
Sbjct: 516 GEPVEVLDSALLDFGFPVGPITLLDEVGIDVGAKISPILEKELGGEQFQAPKAFDKLLQN 575

Query: 410 GRNGKANGKGLYTYEKGS----------KPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
            R G+ NGKG Y Y K +          K   D SV  ++        I P  K   +  
Sbjct: 576 DRKGRKNGKGFYLYGKAAPRNKLTGKEGKKTVDESVYGVL-------GIKPSAK---LAR 625

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EI E  +  ++NE+   L+ G+V  A D D  ++ G+ FP + GG   + D +G +++ 
Sbjct: 626 QEIAERCVLLMLNEAAMALDSGVVASARDGDIGAIFGIGFPPFLGGPFRYMDTLGIDHLV 685

Query: 520 TSLKKWSQLYGNFFKPSRFLEERATK 545
             L+ + + +G+ F P   L+  A +
Sbjct: 686 GRLEYYQKRHGDRFAPCARLKAMAAE 711


>gi|398865038|ref|ZP_10620565.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM78]
 gi|398244201|gb|EJN29765.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM78]
          Length = 715

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 275/553 (49%), Gaps = 36/553 (6%)

Query: 11  EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
           E+  K+G +DAVV  E       EL+K +     D  A+R+P +  L    KL ++ +  
Sbjct: 177 EDALKVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKL----KLNAIEQMM 232

Query: 64  EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
                    A +  PN P     +  I++    G    +  EA  F +L     ++ L+ 
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKLAKTAAAQSLIG 292

Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
           +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++N   +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
            +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
           + +E+E       ILA+NTSTI ++++ +     +  +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
           S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID  +  
Sbjct: 471 SELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEK 530

Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLY 421
           FG P+GP  L+D+ G            + FPDR        VD+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDTRSAVDVLYEAKRLGQKNGKGFY 590

Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
            YE   K K     DPSVL    PI+ E R             V++++I+  ++ P+  E
Sbjct: 591 AYETDKKGKQKKVADPSVLEVLKPIVFEQRE------------VSDEDIINWMMIPLCLE 638

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L G  +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSLGVAEFVALADQYADL-GALY 697

Query: 534 KPSRFLEERATKG 546
            P+  L E A  G
Sbjct: 698 HPTAKLREMAKTG 710


>gi|218695940|ref|YP_002403607.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli 55989]
 gi|407470221|ref|YP_006783336.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|407481116|ref|YP_006778265.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 2011C-3493]
 gi|410481663|ref|YP_006769209.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|417805893|ref|ZP_12452842.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. LB226692]
 gi|417833639|ref|ZP_12480087.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 01-09591]
 gi|422988455|ref|ZP_16979228.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. C227-11]
 gi|422995346|ref|ZP_16986110.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. C236-11]
 gi|423000469|ref|ZP_16991223.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 09-7901]
 gi|423004138|ref|ZP_16994884.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 04-8351]
 gi|423010663|ref|ZP_17001397.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-3677]
 gi|423019890|ref|ZP_17010599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4404]
 gi|423025057|ref|ZP_17015754.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4522]
 gi|423030878|ref|ZP_17021566.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4623]
 gi|423038704|ref|ZP_17029378.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C1]
 gi|423043823|ref|ZP_17034490.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C2]
 gi|423045552|ref|ZP_17036212.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C3]
 gi|423054091|ref|ZP_17042898.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C4]
 gi|423061066|ref|ZP_17049862.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C5]
 gi|429719935|ref|ZP_19254866.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-9450]
 gi|429771818|ref|ZP_19303840.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02030]
 gi|429776762|ref|ZP_19308740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02033-1]
 gi|429785490|ref|ZP_19317387.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02092]
 gi|429791380|ref|ZP_19323236.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02093]
 gi|429797207|ref|ZP_19329014.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02281]
 gi|429798804|ref|ZP_19330604.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02318]
 gi|429807317|ref|ZP_19339043.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02913]
 gi|429812217|ref|ZP_19343902.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-03439]
 gi|429817738|ref|ZP_19349378.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-04080]
 gi|429822949|ref|ZP_19354546.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-03943]
 gi|429908464|ref|ZP_19374428.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-9941]
 gi|429914335|ref|ZP_19380283.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4984]
 gi|429919366|ref|ZP_19385298.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-5604]
 gi|429925185|ref|ZP_19391099.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4986]
 gi|429929122|ref|ZP_19395024.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4987]
 gi|429935661|ref|ZP_19401547.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4988]
 gi|429941341|ref|ZP_19407215.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-5603]
 gi|429944021|ref|ZP_19409884.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-6006]
 gi|429951621|ref|ZP_19417467.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec12-0465]
 gi|429954934|ref|ZP_19420766.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec12-0466]
 gi|254788661|sp|B7LBJ5.1|FADJ_ECO55 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|218352672|emb|CAU98453.1| fused enoyl-CoA hydratase and epimerase and isomerase ;
           3-hydroxyacyl-CoA dehydrogenase [Escherichia coli 55989]
 gi|340734521|gb|EGR63651.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 01-09591]
 gi|340739805|gb|EGR74037.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. LB226692]
 gi|354862181|gb|EHF22619.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. C236-11]
 gi|354867466|gb|EHF27888.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. C227-11]
 gi|354869585|gb|EHF29995.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 04-8351]
 gi|354873440|gb|EHF33817.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 09-7901]
 gi|354880146|gb|EHF40482.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-3677]
 gi|354889570|gb|EHF49819.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4404]
 gi|354893165|gb|EHF53369.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4522]
 gi|354895302|gb|EHF55491.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C1]
 gi|354897576|gb|EHF57734.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4623]
 gi|354898937|gb|EHF59088.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C2]
 gi|354912988|gb|EHF72986.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C5]
 gi|354915993|gb|EHF75969.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C3]
 gi|354917908|gb|EHF77870.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-4632 C4]
 gi|406776825|gb|AFS56249.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|407053413|gb|AFS73464.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 2011C-3493]
 gi|407066256|gb|AFS87303.1| multifunctional fatty acid oxidation complex subunit alpha
           [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|429348666|gb|EKY85427.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02092]
 gi|429360075|gb|EKY96735.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02030]
 gi|429361885|gb|EKY98537.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02093]
 gi|429362027|gb|EKY98676.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02033-1]
 gi|429362157|gb|EKY98805.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02281]
 gi|429365047|gb|EKZ01664.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02318]
 gi|429375778|gb|EKZ12311.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-02913]
 gi|429379072|gb|EKZ15578.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-03439]
 gi|429380423|gb|EKZ16914.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-03943]
 gi|429391954|gb|EKZ28356.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. 11-04080]
 gi|429405339|gb|EKZ41605.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4984]
 gi|429410853|gb|EKZ47074.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-9450]
 gi|429414565|gb|EKZ50740.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4987]
 gi|429421174|gb|EKZ57296.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4986]
 gi|429429508|gb|EKZ65577.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-5604]
 gi|429432195|gb|EKZ68235.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-4988]
 gi|429436401|gb|EKZ72417.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-5603]
 gi|429438606|gb|EKZ74599.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-6006]
 gi|429448228|gb|EKZ84145.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec12-0465]
 gi|429451228|gb|EKZ87119.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec11-9941]
 gi|429457891|gb|EKZ93729.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           O104:H4 str. Ec12-0466]
          Length = 714

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA  +  + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTACKVG-LPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           + +  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AVLVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|149188126|ref|ZP_01866421.1| fatty acid oxidation complex subunit alpha [Vibrio shilonii AK1]
 gi|148838114|gb|EDL55056.1| fatty acid oxidation complex subunit alpha [Vibrio shilonii AK1]
          Length = 705

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 180/552 (32%), Positives = 283/552 (51%), Gaps = 31/552 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++ +      R+   +        +    
Sbjct: 168 LILTGKQLRAKKAKKLGVVDASVPHTILLDVAKDFLGKGKKRKAKKLTKKEVL--MSGTG 225

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+V+  + A+   +KT  N P   A LDVI  G+  G   G+  EAK F ELVM   S
Sbjct: 226 LGRKVIFDQAAKKTNEKTRGNYPAADAILDVIRYGLEKGMKKGLENEAKRFGELVMTSES 285

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
           + L  +FFA   T+++        +P+ V    V+GGGLMG+GI    +    + V +K+
Sbjct: 286 KALRSIFFA---TTEMKKEFGSDAQPKAVDNAVVLGGGLMGAGITHVTVCKAKVPVRIKD 342

Query: 178 VNSEYLLKGIKTIEANVRGLVT-RGKLTQDKANNALKMLK--GVLDYSEFKDVDMVIEAV 234
           V +E +   +  +  N + L   R +    KA+   +ML+  G  D++ F   D+V+EAV
Sbjct: 343 VANEGI---VNALNYNFKLLEKKRKRRIISKADLQAQMLQMAGGTDFTGFAKADVVVEAV 399

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQ++ +++E    P  I ATNTS+I +  + EK    + ++G H+FSPA  MPL
Sbjct: 400 FEDLSLKQQMVNDVESNAKPETIFATNTSSIPITQIAEKAERPENVVGLHYFSPADKMPL 459

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGVD 353
           +E++  E TS + I  ++   +   K P+VV +  GF VNR   PY +++A +L+S    
Sbjct: 460 VEVIPHEGTSDETIATMVKFARKQGKTPIVVKDQAGFYVNRILAPYMNEAANVLLS-NEP 518

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRN 412
           +  +D+A+  FG P+GP  LLD  G  + A           +R FQ P V D LL  GR 
Sbjct: 519 IEALDNALLDFGFPVGPITLLDEVGVDIGAKIMPILVAELGER-FQGPDVFDKLLNDGRK 577

Query: 413 GKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKP-ISVTEKEIVEMILFPVV 471
           G+  GKG YTY KG K   D SV  ++           G KP   ++EK+I      P++
Sbjct: 578 GRKTGKGFYTY-KGKKKSVDSSVYSVL-----------GLKPEAKMSEKDIAIRCALPML 625

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R L+EGI+    D D  ++ G+ FP + GG   + D +G   V   + + ++ YG+
Sbjct: 626 NEAVRCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYMDTIGIKKVVELMNQHAEKYGD 685

Query: 532 FFKPSRFLEERA 543
            F P   L  RA
Sbjct: 686 RFAPCDGLLTRA 697


>gi|340720960|ref|XP_003398896.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial-like
           [Bombus terrestris]
          Length = 764

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/475 (33%), Positives = 244/475 (51%), Gaps = 16/475 (3%)

Query: 74  KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133
           +KT    P     LDVI  G+  G  +G   EAK F EL +    RGL  +FF Q A  K
Sbjct: 294 RKTGGLYPAPLKILDVIRTGMDKGQKAGYEAEAKAFGELAVTPQCRGLTSLFFGQTACKK 353

Query: 134 VPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEAN 193
                  G     V+K+AV+G GLMG+GI    I     V++K+ N   L +G+  ++  
Sbjct: 354 ----NRFGAPKSAVKKIAVVGAGLMGAGIVQVSIDKGFNVIMKDTNEAGLYRGLNQVQKG 409

Query: 194 VRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACP 253
           +   V R K +  + +  L  L   L Y+ FK+ D+VIEAV E + +K K+  E+E   P
Sbjct: 410 LDTAVKRKKYSNVQKDKYLSQLDSTLAYNSFKNADIVIEAVFEDIAIKHKVIKEIEANTP 469

Query: 254 PHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 313
            +C+LATNTS I +  +   +S  D++IG H+FSP   M LLEI+  + TSA+ I   + 
Sbjct: 470 DYCVLATNTSAIPITEIAAGSSRPDKVIGMHYFSPVDKMQLLEIITHKGTSAETIKTAVD 529

Query: 314 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQL 373
           VG    K  + VG+  GF   R        A  L+  GVD   +DS  + FG P+G   L
Sbjct: 530 VGLKQGKTVITVGDGPGFYTTRILSAMLSEAIRLMQEGVDPIDLDSMCKKFGFPVGAATL 589

Query: 374 LDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLL---LKSGRNGKANGKGLYTYEKGSKPK 430
            D  G  V A  S    KA  +R F+   V++L   +++G  G+ +GKG+Y YE   K +
Sbjct: 590 SDEVGIDVGAHISAHLVKALGER-FRGGDVNILSDMVQAGFLGRKSGKGIYIYESNVKNR 648

Query: 431 P-DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 489
             + + L I+++ +    + P G   SV ++++  +  F  VNE+   LEE I+    + 
Sbjct: 649 NMNLAALDILKKYK----LEPKG-STSVEDRQLRMVSRF--VNEAVLCLEENILANPLEG 701

Query: 490 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
           D  +V G+ FP + GG   W D  GA+ +   ++++   YG+ FKP + L + A+
Sbjct: 702 DIGAVFGLGFPPFTGGPFRWIDFYGADKLVQKMEEFQSHYGDAFKPCQMLRDMAS 756


>gi|398900312|ref|ZP_10649369.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM50]
 gi|398181211|gb|EJM68781.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM50]
          Length = 715

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/558 (30%), Positives = 276/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWA-------LDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+LL+ +            D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEKLLEAALNLVKGAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEATGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKE--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMQDDRRSAVDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + K     DPSVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKQKKVADPSVLEVLKPIVFEQR------------DVTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L   A  G
Sbjct: 694 -GALYHPTTKLRAMAKNG 710


>gi|168242516|ref|ZP_02667448.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168817872|ref|ZP_02829872.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194451326|ref|YP_002046443.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|197248926|ref|YP_002147346.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197263338|ref|ZP_03163412.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|200388801|ref|ZP_03215413.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|386592196|ref|YP_006088596.1| Fatty acid oxidation complex subunit alpha [Salmonella enterica
           subsp. enterica serovar Heidelberg str. B182]
 gi|409250994|ref|YP_006886800.1| enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|419728519|ref|ZP_14255484.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41579]
 gi|419733334|ref|ZP_14260233.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41563]
 gi|419738390|ref|ZP_14265154.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41573]
 gi|419746414|ref|ZP_14273002.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41566]
 gi|421568674|ref|ZP_16014389.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00322]
 gi|421574939|ref|ZP_16020554.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00325]
 gi|421577999|ref|ZP_16023581.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00326]
 gi|421583585|ref|ZP_16029104.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00328]
 gi|440761527|ref|ZP_20940601.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Agona str.
           SH11G1113]
 gi|440767079|ref|ZP_20946065.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Agona str.
           SH08SF124]
 gi|440773781|ref|ZP_20952672.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Agona str.
           SH10GFN094]
 gi|254788646|sp|B4TCA8.1|FADJ_SALHS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|254788650|sp|B5EZR9.1|FADJ_SALA4 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|194409630|gb|ACF69849.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|197212629|gb|ACH50026.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197241593|gb|EDY24213.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199605899|gb|EDZ04444.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|205338643|gb|EDZ25407.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205344950|gb|EDZ31714.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|320086822|emb|CBY96594.1| enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|381299573|gb|EIC40645.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41579]
 gi|381300468|gb|EIC41529.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41563]
 gi|381302612|gb|EIC43648.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41573]
 gi|381302893|gb|EIC43923.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. 41566]
 gi|383799240|gb|AFH46322.1| Fatty acid oxidation complex subunit alpha [Salmonella enterica
           subsp. enterica serovar Heidelberg str. B182]
 gi|402523465|gb|EJW30782.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00325]
 gi|402525576|gb|EJW32863.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00326]
 gi|402529751|gb|EJW36982.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00322]
 gi|402531909|gb|EJW39111.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. CFSAN00328]
 gi|436414756|gb|ELP12682.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Agona str.
           SH10GFN094]
 gi|436421578|gb|ELP19423.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Agona str.
           SH08SF124]
 gi|436424749|gb|ELP22514.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Agona str.
           SH11G1113]
          Length = 715

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|291387083|ref|XP_002709860.1| PREDICTED: mitochondrial trifunctional protein, alpha subunit
           [Oryctolagus cuniculus]
          Length = 763

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/566 (30%), Positives = 279/566 (49%), Gaps = 32/566 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           MML  +SI ++   K+GL+D +V             T E L +V+  +A  +A ++    
Sbjct: 200 MMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEEVAVSFAKGLADKKISSK 259

Query: 48  RSLHRTDKLGSLSEA-----REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSG 101
           R+    +KL S +       +++ K    Q +K    + P     +DV++ GI  G  +G
Sbjct: 260 RNKGLMEKLTSYAMTIPFVRQQIYKKVEEQVQKQTKGLYPAPLKIIDVVKTGIEQGNDAG 319

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSG 161
            L E++ F EL M   S+ L+ ++  Q    K       G   + V+++A++G GLMG+G
Sbjct: 320 YLAESQKFGELAMTKESKALMGLYHGQVLCKK----NKFGAPQKEVKQLAILGAGLMGAG 375

Query: 162 IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221
           IA   +   +  +LK+     L +G + +   +   V +  LT  + ++    L G LDY
Sbjct: 376 IAQVSVDKGLNTILKDATLAGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDY 435

Query: 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRII 281
             F+  DMVIEAV E + LK K+  E+E   P HC+ A+NTS + +N +   +   +++I
Sbjct: 436 QNFEKADMVIEAVFEDLSLKHKVLKEVEAVIPDHCVFASNTSALPINEIAAVSKRPEKVI 495

Query: 282 GAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 341
           G H+FSP   M LLEI+ T++TS       + VG    KV VVV +  GF   R   P  
Sbjct: 496 GMHYFSPVDKMQLLEIITTQKTSKDTTASAVAVGLKQGKVIVVVKDGPGFYTTRCLAPMM 555

Query: 342 QSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP 401
                ++  GV   ++DS   SFG P+G   L D  G  VA   +++  KAF +R F   
Sbjct: 556 SEVIRILQEGVGPKKLDSLTTSFGFPVGAATLADEVGVDVAKHVAEDLGKAFGER-FGGG 614

Query: 402 LVDLL---LKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
            ++LL   +  G  G+ +GKG Y Y++GSK K   S +  I     L+ +    +P   +
Sbjct: 615 SLELLQQMVAKGFLGRKSGKGFYIYQEGSKDKNLNSDMDSI-----LAGLKLPARPEVSS 669

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           +++I   ++   VNE+   L+EGI+   ++ D  +V G+ FP   GG   + D  GA  V
Sbjct: 670 DEDIQYRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKV 729

Query: 519 YTSLKKWSQLYGNFFKPSRFLEERAT 544
              L+K+   YG  F P + L + A 
Sbjct: 730 VDRLRKYEAAYGKQFTPCQLLIDHAN 755


>gi|260598754|ref|YP_003211325.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter turicensis z3032]
 gi|260217931|emb|CBA32533.1| Fatty acid oxidation complex subunit alpha [Cronobacter turicensis
           z3032]
          Length = 717

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 180/554 (32%), Positives = 277/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K GL+D VV    LL+     A ++A +R+P  R L   +++  G 
Sbjct: 167 MILAGKQLRPRQALKAGLVDDVVPQSILLEA----AAELAKKRRPAPRRLPVRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +   +KT  N P  Q  +DV+  G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRMVTQKTHQKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPES 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
             L  +FFA   T+++   T     PR +  V V+GGGLMG GIA        + V +K+
Sbjct: 283 AALRGLFFA---TTELKKETGSEAAPRALHSVGVLGGGLMGGGIAYVTATKARLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           ++ + +   +K     +   V R  L   + +  + ++    DY  F   D+V+EAV E 
Sbjct: 340 ISEKGINHALKYSWDLLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFEE 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +E+E    PH I A+NTS++ +  +    +  +++IG H+FSP   MPL+E+
Sbjct: 400 LTLKQNMVAEIEAHTAPHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSA+ I   + + K   K P+VV +C GF VNR   PY   A   +  G  + +I
Sbjct: 460 IPHAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+   G P+GP QLLD  G  V        ++A+  R F +P   V  +L   R G+ 
Sbjct: 520 DEALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + S  + DP+V  +I        + PGGK   ++ +EI E  +  ++N
Sbjct: 579 NGRGFYLYPAKGRKSNKQADPAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+EG+V  A D D  +V G+ FP + GG   + D +GA  V  +L + S  YG+ 
Sbjct: 629 EAARCLDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAAVVATLTRLSTRYGDR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L   A  G
Sbjct: 689 FTPCDRLLRMAQTG 702


>gi|340000113|ref|YP_004730996.1| fatty acid oxidation complex alpha subunit [Salmonella bongori NCTC
           12419]
 gi|339513474|emb|CCC31227.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           bongori NCTC 12419]
          Length = 715

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 168/546 (30%), Positives = 273/546 (50%), Gaps = 24/546 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R L   +++  G 
Sbjct: 167 MILTGKQLRARQALKTGLVDDVVPQSILLEA----AVELAKKERLAQRRLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTQVKKDPG-SDAPPGPLHSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKASQRDKQLSLISGSTDYRGFSHRDVVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH I A+NTS++ ++ +    +   ++IG HFFSP   MPL+E++
Sbjct: 401 ALKQQMVAEVEQHCAPHTIFASNTSSLPISDIAANAARPQQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  +  ID
Sbjct: 461 PHASTSAQTIATTVQLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTYEK---GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           G+G Y Y K    SK + DP++  +I       N+    +   ++ +++ E  +  ++NE
Sbjct: 580 GRGFYLYGKKGRKSKKQVDPAIYKLI-------NVQGQSR---LSAQQVAERCVMLMLNE 629

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R  +E ++  A D D  +V G+ FP + GG   + D +GA  V  +L++ + LYG  +
Sbjct: 630 AARCFDERVIRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGEVVAALRRLATLYGPRY 689

Query: 534 KPSRFL 539
            P   L
Sbjct: 690 APCEQL 695


>gi|109897985|ref|YP_661240.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudoalteromonas atlantica T6c]
 gi|109700266|gb|ABG40186.1| 3-hydroxyacyl-CoA dehydrogenase [Pseudoalteromonas atlantica T6c]
          Length = 717

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 184/551 (33%), Positives = 282/551 (51%), Gaps = 25/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML   S+ +++  K G++D +V    LL+V    A+++A + KP  R   + D +G   
Sbjct: 175 MMLTGASVRAKQAKKYGIVDDMVPRSILLEV----AIEMAKKPKPN-RKPVKLDAMGQFL 229

Query: 61  E----AREVL-KLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 114
           E     R+++ K AR Q + KT  N P  +  +D IE G+  G   G   EAK F  LVM
Sbjct: 230 ERTPMGRKLMFKQARKQTQAKTMGNYPSPERIIDCIETGLEKGKAQGFAVEAKHFGHLVM 289

Query: 115 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYV 173
              S  L  +FFA     K   V   G+ P+ ++K+ V+GGGLMG GIA        +  
Sbjct: 290 TSESAALRSLFFATTEMKKENGVE--GVAPKTLKKIGVLGGGLMGGGIAFVTATKAKLPA 347

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            +K++ S+ +   +K     +   V R  +   +  + L  L G +DY  F + D+VIEA
Sbjct: 348 RIKDIRSDGIAHAMKYSYDILNKKVKRKFMLHSEMQSQLSRLTGSVDYVGFDNTDVVIEA 407

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LKQ + +++E+ C  H I A+NTS+I +  +  K    + +IG H+FSP   MP
Sbjct: 408 VFEDLALKQNMVADVEEHCSEHTIFASNTSSIPIGQIAAKAKRPENVIGLHYFSPVDKMP 467

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGV 352
           L E++  E TS Q I   + + K   K P+VV +  GF VNR   PY ++SA +L++ G 
Sbjct: 468 LAEVIAHEATSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GE 526

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
            + +ID A+  FG P+GP +LLD  G  V           F +R   +P  D LL   R 
Sbjct: 527 PIEQIDKALVKFGFPVGPIKLLDEVGIDVGTKIGPILVAEFGERFQSAPGFDKLLADDRK 586

Query: 413 GKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           GK N +G Y YE G KP  +     + E    L  I P  +   ++E  I E  +  ++N
Sbjct: 587 GKKNKRGFYNYE-GKKPGKE-----VDESVYDLLGITPNSR---LSEHTIAERCVLLMLN 637

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+   L+EG+V    D D  ++ G+ FP + GG   + D +G N+V   L  + Q +G+ 
Sbjct: 638 EAAICLDEGVVRNPRDGDIGAIFGIGFPPFLGGPFRYMDTLGINHVVERLTHYQQQFGDK 697

Query: 533 FKPSRFLEERA 543
           F P++ L + A
Sbjct: 698 FAPAKRLLDMA 708


>gi|383873077|ref|NP_001244421.1| peroxisomal bifunctional enzyme [Macaca mulatta]
 gi|380790201|gb|AFE66976.1| peroxisomal bifunctional enzyme isoform 1 [Macaca mulatta]
          Length = 723

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 177/569 (31%), Positives = 279/569 (49%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWAL----DIAARR---KPWIRSLHRTDKLGS 58
           + I + E  KLG++D VV S+ + +  R         + +RR   KP I+SL   D + S
Sbjct: 156 RHILAGEALKLGILDKVVNSDPVEEAIRFAQTVSDQPLESRRLCNKP-IQSLPNMDTIFS 214

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                EVL    L+ +K  P     +AC+  ++  + +    G+ KE ++F  L     +
Sbjct: 215 -----EVL----LKMQKQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA+R  +K    +    K    + V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFFAERKANKWSTPSGASWKTASAQPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    +  K+ Q     +    K      E   VD+VIEAV 
Sbjct: 326 VDSDKNQLATANKIITSVLEKEAS--KMQQSGHPWSGPKPKLTSSMKELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M + K IKK+ VVVGNC GF  NR   PY      L+  G    
Sbjct: 444 EVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ E
Sbjct: 563 DMLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETYHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+  +L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFHILGEGIATSPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|194442472|ref|YP_002041652.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|418787698|ref|ZP_13343498.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19447]
 gi|418791598|ref|ZP_13347354.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19449]
 gi|418799986|ref|ZP_13355650.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19567]
 gi|418805351|ref|ZP_13360939.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 21550]
 gi|418814079|ref|ZP_13369599.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 22513]
 gi|418814562|ref|ZP_13370076.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 21538]
 gi|418819526|ref|ZP_13374977.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 22425]
 gi|418832306|ref|ZP_13387248.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM N18486]
 gi|418838424|ref|ZP_13393268.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM N1543]
 gi|418839358|ref|ZP_13394195.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 21554]
 gi|418847102|ref|ZP_13401864.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19443]
 gi|418852074|ref|ZP_13406779.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 37978]
 gi|254788645|sp|B4SZR0.1|FADJ_SALNS RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|194401135|gb|ACF61357.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|392762616|gb|EJA19430.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19567]
 gi|392765223|gb|EJA22011.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19447]
 gi|392770747|gb|EJA27471.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19449]
 gi|392772413|gb|EJA29114.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 22513]
 gi|392785052|gb|EJA41633.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 21550]
 gi|392794356|gb|EJA50779.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 21538]
 gi|392794817|gb|EJA51209.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 22425]
 gi|392795937|gb|EJA52287.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM N1543]
 gi|392797825|gb|EJA54123.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM N18486]
 gi|392808865|gb|EJA64912.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 19443]
 gi|392813069|gb|EJA69044.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 21554]
 gi|392815604|gb|EJA71540.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Newport
           str. CVM 37978]
          Length = 715

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|16761312|ref|NP_456929.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
 gi|29140992|ref|NP_804334.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|213160943|ref|ZP_03346653.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213611232|ref|ZP_03370058.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213650422|ref|ZP_03380475.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|213852450|ref|ZP_03381982.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|289826758|ref|ZP_06545703.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|378958622|ref|YP_005216108.1| 3-hydroxyacyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. P-stx-12]
 gi|81513527|sp|Q8Z4Z0.1|FADJ_SALTI RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|25291855|pir||AB0805 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503611|emb|CAD07620.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29136617|gb|AAO68183.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|374352494|gb|AEZ44255.1| 3-hydroxyacyl-CoA dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. P-stx-12]
          Length = 715

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|398860105|ref|ZP_10615763.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM79]
 gi|398235310|gb|EJN21141.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas sp. GM79]
          Length = 715

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 276/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E+L       LK +     D  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPEKLQEAALNLLKGAISGEFDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L+ +F   +   K     D   K   V++ AV+G G+MG GIA         +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N   + +G+      + G V +G++T  K    L  ++  L Y +F  VD+V+EAV+E+ 
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI + ++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEDKVKEDTILASNTSTISITLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD+L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKN 585

Query: 417 GKGLYTYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + K     DPSVL    PI+ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKQKKVADPSVLEVLKPIVFEQRE------------VTDEDIINWMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L   A  G
Sbjct: 694 -GALYHPTAKLRAMAKNG 710


>gi|167549603|ref|ZP_02343362.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205325346|gb|EDZ13185.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
          Length = 715

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLIEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|421886226|ref|ZP_16317403.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Senftenberg
           str. SS209]
 gi|379984243|emb|CCF89676.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Senftenberg
           str. SS209]
          Length = 708

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 274/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 160 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 215

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 216 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 275

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 276 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 333

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 334 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 393

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 394 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 453

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 454 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 513

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 514 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 572

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG K K   DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 573 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 620

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 621 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 680

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 681 RYAPCEQL 688


>gi|104782737|ref|YP_609235.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas entomophila L48]
 gi|123380844|sp|Q1I7D4.1|FADB_PSEE4 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|95111724|emb|CAK16448.1| fatty oxidation complex alpha subunit [Includes: Enoyl-CoA
           hydratase ; Delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase ; 3-hydroxyacyl-CoA dehydrogenase;
           3-hydroxybutyryl-CoA epimerase] [Pseudomonas entomophila
           L48]
          Length = 715

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/558 (31%), Positives = 276/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDHKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLARTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGNVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E+E       ILA+NTSTI +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D SVL    P+I E R             V++++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVADASVLDVLKPVIFEQR------------EVSDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         K++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADKYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  +  +  L E A  G
Sbjct: 694 -GPLYHATAKLREMAKNG 710


>gi|429082219|ref|ZP_19145306.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Cronobacter condimenti
           1330]
 gi|426549173|emb|CCJ71347.1| Enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /
           3-hydroxybutyryl-CoA epimerase [Cronobacter condimenti
           1330]
          Length = 717

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 177/543 (32%), Positives = 273/543 (50%), Gaps = 26/543 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K GL+D VV    LL      A+ +A  R+P  R L   +++  G 
Sbjct: 167 MILAGKQLRPRQARKAGLVDDVVPPAILLDA----AIALAKTRRPGARRLPLRERVLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L        +A+   +KT  N P  Q  +DV+  G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRTLLFRMVAKKTHEKTHGNYPAAQRIIDVVRTGLEQGSASGYQAEARAFGELAMTPES 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
             L  +FFA   T+++   T  G+ PR +  V ++GGGLMG GIA        + V +K+
Sbjct: 283 AALRGLFFA---TTELKKETGSGVAPRALHSVGILGGGLMGGGIAYVTATKARLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           ++ + +   +K     +   V R  L   + +  + ++    DY  F+  D+V+EAV E 
Sbjct: 340 ISEKGINHALKYSWDLLEKKVRRRHLRPSERDAQMALISASTDYRGFRHRDIVVEAVFEE 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +E+E    PH I A+NTS++ +  +    +  +++IG H+FSP   MPL+E+
Sbjct: 400 LTLKQNMVAEIEAHTAPHTIFASNTSSLPIGDIAAGAARPEQVIGLHYFSPVDKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS + I   + + K   K P+VV +C GF VNR   PY   A   +  G  + +I
Sbjct: 460 IPHAGTSPETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+   G P+GP QLLD  G  V        ++A+  R F +P   V  +L   R G+ 
Sbjct: 520 DEALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPR-FSAPDEAVAAILNDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + SK + DP+V  +I        + PGGK   ++  EI E  +  ++N
Sbjct: 579 NGRGFYLYPAKGRKSKKQVDPAVYGLI-------GVKPGGK---LSGDEIAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+EG+V  A D D  +V G+ FP + GG   + D +GA  V  +L + S  YG  
Sbjct: 629 EAARCLDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAQVVAALTRLSTRYGER 688

Query: 533 FKP 535
           F P
Sbjct: 689 FTP 691


>gi|152985884|ref|YP_001347517.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas aeruginosa PA7]
 gi|166971631|sp|A6V382.1|FADB_PSEA7 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|150961042|gb|ABR83067.1| fatty oxidation complex, alpha subunit FadB [Pseudomonas aeruginosa
           PA7]
          Length = 715

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/559 (30%), Positives = 273/559 (48%), Gaps = 36/559 (6%)

Query: 5   SKSITSEEGWKLGLIDAVVTSEELLKVSRLWA-------LDIAARRKPWIRSLHRTDKLG 57
            K   +E+  K+G +DAVV  E+L   +   A       LD  ARR+P +  L    KL 
Sbjct: 171 GKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL----KLN 226

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           ++ +           A +  PN P     +  I++    G    +  EA  F +L     
Sbjct: 227 AIEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTSV 286

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
           ++ L+ +F   +   K     D   K   V+  AV+G G+MG GIA    L    +++K+
Sbjct: 287 AQSLIGLFLNDQELKKKAKKYDEVAKD--VKLAAVLGAGIMGGGIAYQSALKGTPILMKD 344

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           +  E +  G+      +   V +G+LT  K   AL  ++  + Y +F +VD+V+EAV+E+
Sbjct: 345 IREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVEN 404

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
             +KQ + +E+E A     I+A+NTSTI ++++ +     +   G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEV 464

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +R E+T    I   +   K + K P+VV +C GF VNR  FPY      L+  GVD  RI
Sbjct: 465 IRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLGFGVDFVRI 524

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF--QSPLVDLLLKSGRNGKA 415
           D  +  FG P+GP  L D+ G            + FPDR        VD++ ++ R G+ 
Sbjct: 525 DKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQK 584

Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
           NGKG Y YE   + KP    DP       PI+ E R             VT+++IV  ++
Sbjct: 585 NGKGFYAYETDKRGKPKKVTDPQAYEVLKPIVVEQRE------------VTDEDIVNFMM 632

Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
            P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         K+++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAE 692

Query: 528 LYGNFFKPSRFLEERATKG 546
           L G  + P+  L E A  G
Sbjct: 693 L-GALYHPTAKLREMAKNG 710


>gi|426343176|ref|XP_004038193.1| PREDICTED: peroxisomal bifunctional enzyme-like, partial [Gorilla
           gorilla gorilla]
          Length = 535

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/510 (30%), Positives = 255/510 (50%), Gaps = 26/510 (5%)

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           SL     +   A L+ ++  P     +AC+  ++  + +    G+ KE ++F  L+    
Sbjct: 17  SLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQ 76

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVV 174
           +R L + FFA+R  +K    +    K    R V  V V+G G MG GI  +     I V+
Sbjct: 77  ARALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVI 136

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
             + +   L    K I + +    ++ + +    +     L   +   E   VD+VIEAV
Sbjct: 137 AVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAV 194

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM L
Sbjct: 195 FEEMSLKKQVFAELSAVCKPEAFLCTNTSALDIDEIASSTDRPHLVIGTHFFSPAHVMKL 254

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           LE++ ++ +S   I  +M + K IKK+ VVVGNC GF  NR   PY   A  L+  G   
Sbjct: 255 LEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKP 314

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPL 402
             +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+
Sbjct: 315 EEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPI 373

Query: 403 VDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 460
            D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ 
Sbjct: 374 PDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETHHI----EPRTISQD 429

Query: 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 520
           EI+E  L+ ++NE+ R+L EGI      +D   + G  +P ++GG +F+A  VG   V  
Sbjct: 430 EILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPRVLE 489

Query: 521 SLKKWSQLYGNF--FKPSRFLEERATKGIP 548
            L+K+ +   +    +PS +L++ A++G P
Sbjct: 490 KLQKYYRQNPDIPQLEPSDYLKKLASQGNP 519


>gi|419386966|ref|ZP_13927844.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14D]
 gi|378231493|gb|EHX91604.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           DEC14D]
          Length = 714

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+V    A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPAIERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  +   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEMVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|204928988|ref|ZP_03220131.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|452123787|ref|YP_007474035.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Javiana
           str. CFSAN001992]
 gi|204321532|gb|EDZ06731.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|451912791|gb|AGF84597.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Javiana
           str. CFSAN001992]
          Length = 715

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|83647442|ref|YP_435877.1| multifunctional fatty acid oxidation complex subunit alpha [Hahella
           chejuensis KCTC 2396]
 gi|83635485|gb|ABC31452.1| 3-hydroxyacyl-CoA dehydrogenase [Hahella chejuensis KCTC 2396]
          Length = 715

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/551 (29%), Positives = 278/551 (50%), Gaps = 30/551 (5%)

Query: 10  SEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS----EAREV 65
           +E+  K G +DA V  E+L+  + L  L  A   K   ++  R +K G L     E+   
Sbjct: 176 AEQALKEGAVDAAVAPEKLMDAA-LSVLRQAIEGKLDYKA-RREEKTGKLKLNPMESMMA 233

Query: 66  LKLAR-LQAKKTAPNMPQHQACLDVIEEGIVHGGYS---GVLKEAKVFKELVMLDTSRGL 121
            + A+   A +   N P     + V+++   H G +    +  EAK F ++     +  L
Sbjct: 234 FETAKGYVAGQAGRNYPAPVEAIKVMQK---HAGMTRDKAIEVEAKGFAKMAKTSVAHSL 290

Query: 122 VHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181
           + +F   +   K     D+  K   V++ AV+G G+MG G+A    L    +++K++N  
Sbjct: 291 IGLFLNDQELKK--KAKDLEPKAGAVKQAAVLGAGIMGGGVAYQSALKGTPILMKDINQS 348

Query: 182 YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLK 241
            +  G+K  +  +   V +G++   +  + L  +   L Y +F  VD+V+EAV+E+  +K
Sbjct: 349 GIDLGLKEAKKLLTKRVEKGRMNASEMADVLNRITPALSYGDFGTVDLVVEAVVENPKVK 408

Query: 242 QKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTE 301
             +  E+E       IL +NTSTI +N + +     +   G HFF+P H+MPL+E++R E
Sbjct: 409 DIVLREVEDLVREDTILTSNTSTISINRLAQNLKRPENFCGMHFFNPVHMMPLVEVIRGE 468

Query: 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI 361
           +TS + I   +   K + K P+VV +C GF VNR  FPY      LV  G D  ++D  +
Sbjct: 469 KTSEKAIATTVAYAKAMGKTPIVVNDCPGFLVNRILFPYFGGFIGLVRDGADFQQVDKVM 528

Query: 362 RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-SF-QSPLVDLLLKSGRNGKANGKG 419
             FG P+GP  LLD+ G   A        + FPDR S+ ++ ++D++   GR G+ + KG
Sbjct: 529 ERFGWPMGPAYLLDVVGMDTAKHAGDVMAEGFPDRMSYSETTIIDVMFDKGRYGQKSDKG 588

Query: 420 LYTYE---KGSKPK-PDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESC 475
            Y YE   KG + K  D SV  +I+  ++             +E+EI+E ++ P+  E+ 
Sbjct: 589 FYAYELDKKGKQKKIVDDSVDALIKSVQKSQR--------DFSEEEIIERMMAPLCIETV 640

Query: 476 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP 535
           R LE+GIV  A++ D   + G+ FP +RGG + + D++G         K++ L G  + P
Sbjct: 641 RCLEDGIVETAAEADMGLIFGIGFPPFRGGALRYIDSLGVEEFCKIADKYADL-GALYHP 699

Query: 536 SRFLEERATKG 546
           ++ L + A  G
Sbjct: 700 TQGLRDMAKSG 710


>gi|62180960|ref|YP_217377.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|375115294|ref|ZP_09760464.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SCSA50]
 gi|75481934|sp|Q57LW6.1|FADJ_SALCH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|62128593|gb|AAX66296.1| paral putative dehydrogenase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715440|gb|EFZ07011.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SCSA50]
          Length = 715

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 274/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTKVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG K K   DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|418511711|ref|ZP_13077962.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Pomona str.
           ATCC 10729]
 gi|366084561|gb|EHN48469.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Pomona str.
           ATCC 10729]
          Length = 715

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|161612873|ref|YP_001586838.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Paratyphi B
           str. SPB7]
 gi|189044423|sp|A9N453.1|FADJ_SALPB RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|161362237|gb|ABX66005.1| hypothetical protein SPAB_00579 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 715

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|153828133|ref|ZP_01980800.1| fatty oxidation complex, alpha subunit [Vibrio cholerae 623-39]
 gi|148876375|gb|EDL74510.1| fatty oxidation complex, alpha subunit [Vibrio cholerae 623-39]
          Length = 724

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 275/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 184 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 243

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 244 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 303

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 304 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKTKTSVRI 358

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F+  D+VIEAV 
Sbjct: 359 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFERCDVVIEAVF 418

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 419 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 478

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 479 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 538

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 539 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 597

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 598 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 647

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 648 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 707

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 708 PCDGLLTRAGLG 719


>gi|16765715|ref|NP_461330.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|378445815|ref|YP_005233447.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|378451113|ref|YP_005238472.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|378700298|ref|YP_005182255.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|378984951|ref|YP_005248106.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|379701622|ref|YP_005243350.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. ST4/74]
 gi|383497088|ref|YP_005397777.1| fatty acid oxidation complex subunit alpha [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 798]
 gi|422026679|ref|ZP_16373060.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm1]
 gi|422031703|ref|ZP_16377859.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm2]
 gi|427551965|ref|ZP_18928352.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm8]
 gi|427568296|ref|ZP_18933071.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm9]
 gi|427588696|ref|ZP_18937867.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm3]
 gi|427612160|ref|ZP_18942728.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm4]
 gi|427635977|ref|ZP_18947625.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm6]
 gi|427656704|ref|ZP_18952390.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm10]
 gi|427661947|ref|ZP_18957297.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm11]
 gi|427671909|ref|ZP_18962115.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm12]
 gi|427799422|ref|ZP_18967382.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm5]
 gi|81522343|sp|Q8ZNA7.1|FADJ_SALTY RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|16420932|gb|AAL21289.1| putative dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|261247594|emb|CBG25421.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994491|gb|ACY89376.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301158946|emb|CBW18459.1| hypothetical fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913379|dbj|BAJ37353.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|323130721|gb|ADX18151.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. ST4/74]
 gi|380463909|gb|AFD59312.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 798]
 gi|414017246|gb|EKT00985.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm1]
 gi|414018055|gb|EKT01730.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm8]
 gi|414019205|gb|EKT02825.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm2]
 gi|414031709|gb|EKT14753.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm9]
 gi|414032901|gb|EKT15885.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm3]
 gi|414036147|gb|EKT18989.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm4]
 gi|414046228|gb|EKT28574.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm10]
 gi|414047105|gb|EKT29402.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm6]
 gi|414052063|gb|EKT34137.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm11]
 gi|414058930|gb|EKT40561.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm12]
 gi|414064415|gb|EKT45356.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. STm5]
          Length = 715

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|292492128|ref|YP_003527567.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
           halophilus Nc4]
 gi|291580723|gb|ADE15180.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Nitrosococcus
           halophilus Nc4]
          Length = 746

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/488 (32%), Positives = 257/488 (52%), Gaps = 21/488 (4%)

Query: 72  QAKK-----TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 126
           QAKK     T  N+P     L+VI  GI  G  +G   E + F +L +   +R L+ +F 
Sbjct: 257 QAKKKVLSHTHGNLPAPLQALEVIRTGIEEGLEAGFKAEVEAFGDLAVSTKARNLMALFL 316

Query: 127 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLK 185
           A+ A  K    T+  + PR V KV V+G GLMGSG+         + V LK+V+ E L +
Sbjct: 317 ARSALKKDLG-TEAEVTPRAVHKVGVLGAGLMGSGVTYVTAAEAGLPVRLKDVSHEVLRQ 375

Query: 186 GIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIF 245
           G++++   V   V + ++T  + +  L +++   +Y+ FK  D+VIEAV+E++ +K ++ 
Sbjct: 376 GLRSLWKAVTEQVQKRRMTLGERDRVLALVRPTTEYTGFKRADVVIEAVVENIEVKHQVL 435

Query: 246 SELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305
            E+E    P  I A+NTS+I ++ + E +   + +IG H+FSP   +PLLE+V TE+T+ 
Sbjct: 436 REVEAHGGPEMIFASNTSSIPIHKIAEASHHPEAVIGMHYFSPVPKVPLLEVVVTEKTAP 495

Query: 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFG 365
           +V+   + +GK   K  +VV +  GF   R   PY   A  L++ GV +  ID A+ +FG
Sbjct: 496 EVVATCVALGKRQNKTVIVVRDGAGFYTTRILGPYINEATHLLAEGVSIEDIDRALINFG 555

Query: 366 LPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425
            P+GP +LLD  G  V    ++   +AF +R   + +++ L+ + R GK NG+G Y Y+K
Sbjct: 556 FPVGPIKLLDEVGIDVVQKIAQILQEAFGERMKPTSVLEKLVGADRFGKKNGQGFYRYQK 615

Query: 426 ----GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEG 481
                   + D SV        +L ++ P  K   +   EI    L P+VNE+     +G
Sbjct: 616 VEGVFKGKQVDKSVY-------QLLDVKPHKK---IEANEIAMRCLLPMVNEAVYCYSDG 665

Query: 482 IVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEE 541
           I+  A D D  +V G+ FP + GG   + D  G   +   L  + + +G  F P+  L E
Sbjct: 666 ILRSARDGDVGAVFGLGFPPFLGGPFRFIDNQGTGEIVERLTHYQKQWGERFTPAPLLVE 725

Query: 542 RATKGIPL 549
            A +GI L
Sbjct: 726 LAQQGIGL 733


>gi|375002207|ref|ZP_09726547.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Infantis str. SARB27]
 gi|353076895|gb|EHB42655.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar Infantis str. SARB27]
          Length = 715

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCATHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|403270077|ref|XP_003927023.1| PREDICTED: peroxisomal bifunctional enzyme isoform 1 [Saimiri
           boliviensis boliviensis]
          Length = 723

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 173/572 (30%), Positives = 279/572 (48%), Gaps = 39/572 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR---KPWIRSLHRTDKLG 57
           ++   + I + E  KLG++D VV S+ L +  R       A+R   +P          + 
Sbjct: 151 LITTGRYILAGEALKLGILDKVVNSDPLEEAIRF------AQRVSDQPLESRRLFNKPIP 204

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           SL     +   A L+ +K  P     +AC+  ++  + +    G  KE ++F+ L+    
Sbjct: 205 SLPNMDTIFSEALLKMRKQHPGCLAQEACVRAVQAAVQYPYEVGSKKEEELFQYLLQSGQ 264

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVV 174
           +R L + F A+R  +K  + +    K    + +  V V+G G MG GI  +     I V+
Sbjct: 265 ARALQYAFLAERKANKWSSPSGASWKTASAQPISSVGVVGLGTMGRGIVISFARAGIPVI 324

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--EFKDVDMVIE 232
             + +   L    K I + +    ++      ++ +A    K  L  S  E   VD+VIE
Sbjct: 325 AVDSDKNQLATANKIITSVLEKEASK----MQQSGHAWSGPKPRLTSSMKELGGVDLVIE 380

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + LK+++F+EL   C P   L TNTS +D++ +   TS    +IG HFFSPAH+M
Sbjct: 381 AVFEDMSLKKQVFAELSAVCKPEAFLCTNTSALDVDELASSTSRPHLVIGTHFFSPAHIM 440

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLE++ +  +S   I  +M + K IKK+ VVVGNC GF  NR   PY      L+  G 
Sbjct: 441 KLLEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGS 500

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQS 400
               +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  
Sbjct: 501 KPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-C 559

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
           P+ D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P  ++
Sbjct: 560 PIPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRETHHI----EPRIIS 615

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
             EI+E  L+ ++NE+ R+L EGI      +D   + G  +P +RGG +F+A  VG   V
Sbjct: 616 RDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPTV 675

Query: 519 YTSLKKWSQLYGNF--FKPSRFLEERATKGIP 548
              L+K+ +   +    +PS +L++ A++G P
Sbjct: 676 LEKLQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|359783415|ref|ZP_09286629.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas psychrotolerans L19]
 gi|359368632|gb|EHK69209.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas psychrotolerans L19]
          Length = 715

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 173/550 (31%), Positives = 278/550 (50%), Gaps = 38/550 (6%)

Query: 15  KLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 67
           K+G+ DAVV  E       +L++ + +  LD  A+RKP +  L    +L ++ EA    +
Sbjct: 181 KVGVADAVVAPEHLFDAALDLVRRAAVGELDYRAKRKPKLEKL----QLNAI-EAMMAFE 235

Query: 68  LAR-LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 126
            A+   A +  P+ P     +  I++   +G    +  E   F ++     S  LV +F 
Sbjct: 236 SAKGFVASQAGPHYPAPLEAIKAIQKSANYGRDKALEVEGAGFAKMAQTSVSASLVGLFL 295

Query: 127 AQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186
             +A  +   V +    P  V+  +V+G G+MG GIA    L    +++K++  E L  G
Sbjct: 296 NDQALKRKAKVLEKQAAP--VKLTSVLGAGIMGGGIAYQSALKGTPILMKDIRDEALELG 353

Query: 187 IKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFS 246
           +      +   V +G+L   K   AL  ++  L Y +FK VD+V+EAV+E+  +KQ + +
Sbjct: 354 LSEASKLLNKRVEKGRLEPAKMAEALNRIRPTLSYGDFKSVDLVVEAVVENPKVKQAVLA 413

Query: 247 ELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 306
           E+E       IL +NTSTI ++++ +     +   G HFF+P H+MPL+E++R E+TS +
Sbjct: 414 EVEGQVREDAILTSNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSEK 473

Query: 307 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 366
            I   +   + + K P+VV +C GF VNR  FPY      L++ G D  R+D  +  FG 
Sbjct: 474 AIATTVAYARQMGKNPIVVNDCPGFLVNRILFPYFGGFAALLAQGADFQRVDRLMEKFGW 533

Query: 367 PIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYE 424
           P+GP  L+D+ G   A        + FP+R  +S    VD L ++ R G+ NGKG Y YE
Sbjct: 534 PMGPAYLMDVVGMDTAHHARDVMAEGFPERMKESRKTAVDALYEAQRFGQKNGKGFYVYE 593

Query: 425 KGSKPKP----DPSV----LPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCR 476
              K KP    DP+V     P+  E R              T++EIVE ++ P+  E+ R
Sbjct: 594 TDKKGKPKKVADPAVAEVLAPVTYEQREF------------TDEEIVERMMVPLCLEAVR 641

Query: 477 VLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 536
            LE+GIV  A++ D   + G+ FP +RGG + + D++G         K++ L G  + P+
Sbjct: 642 CLEDGIVESAAEADMGLIYGIGFPPFRGGALRYIDSLGVAEFVAMADKYADL-GPLYHPT 700

Query: 537 RFLEERATKG 546
             L E A  G
Sbjct: 701 PKLREMAAAG 710


>gi|423952231|ref|ZP_17733945.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE-40]
 gi|423980262|ref|ZP_17737497.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE-46]
 gi|408660464|gb|EKL31481.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE-40]
 gi|408665488|gb|EKL36301.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE-46]
          Length = 708

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 228 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 343 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 403 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 463 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGESIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 523 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 582 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 631

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 632 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 691

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 692 PCDGLLTRAGLG 703


>gi|417602951|ref|ZP_12253521.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_94C]
 gi|345350617|gb|EGW82892.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           STEC_94C]
          Length = 714

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  +G   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSTGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+    H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|167993079|ref|ZP_02574174.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|378989774|ref|YP_005252938.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
 gi|205328843|gb|EDZ15607.1| fatty oxidation complex, alpha subunit FadJ [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|332989321|gb|AEF08304.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
          Length = 715

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 274/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++  E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVEEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|422306599|ref|ZP_16393772.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1035(8)]
 gi|408625912|gb|EKK98804.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1035(8)]
          Length = 708

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 275/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 228 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   + +   AV   G    G   +H+        V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGADAKPLPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 343 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 403 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 463 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 523 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 582 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 631

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 632 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 691

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 692 PCDGLLTRAGLG 703


>gi|419829628|ref|ZP_14353114.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-1A2]
 gi|419832599|ref|ZP_14356061.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-61A2]
 gi|421353823|ref|ZP_15804155.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE-45]
 gi|422916813|ref|ZP_16951141.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-02A1]
 gi|423819480|ref|ZP_17715738.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-55C2]
 gi|423852092|ref|ZP_17719531.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-59A1]
 gi|423880240|ref|ZP_17723136.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-60A1]
 gi|423997226|ref|ZP_17740485.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-02C1]
 gi|424015937|ref|ZP_17755778.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-55B2]
 gi|424018871|ref|ZP_17758667.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-59B1]
 gi|424624415|ref|ZP_18062887.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-50A1]
 gi|424628915|ref|ZP_18067212.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-51A1]
 gi|424632945|ref|ZP_18071055.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-52A1]
 gi|424636035|ref|ZP_18074050.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-55A1]
 gi|424639975|ref|ZP_18077865.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-56A1]
 gi|424648009|ref|ZP_18085679.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-57A1]
 gi|443526833|ref|ZP_21092900.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-78A1]
 gi|341638764|gb|EGS63402.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-02A1]
 gi|395952948|gb|EJH63561.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE-45]
 gi|408014608|gb|EKG52240.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-50A1]
 gi|408020210|gb|EKG57553.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-52A1]
 gi|408025369|gb|EKG62427.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-56A1]
 gi|408026100|gb|EKG63129.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-55A1]
 gi|408035450|gb|EKG71918.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-57A1]
 gi|408057799|gb|EKG92634.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-51A1]
 gi|408621213|gb|EKK94216.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-1A2]
 gi|408636125|gb|EKL08292.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-55C2]
 gi|408642577|gb|EKL14321.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-60A1]
 gi|408643957|gb|EKL15670.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-59A1]
 gi|408651243|gb|EKL22499.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-61A2]
 gi|408853933|gb|EKL93712.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-02C1]
 gi|408861233|gb|EKM00829.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-55B2]
 gi|408868879|gb|EKM08186.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-59B1]
 gi|443454703|gb|ELT18503.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-78A1]
          Length = 708

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 228 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 343 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 403 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 463 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGESIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 523 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 582 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 631

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 632 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 691

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 692 PCDGLLTRAGLG 703


>gi|403270079|ref|XP_003927024.1| PREDICTED: peroxisomal bifunctional enzyme isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 698

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 173/572 (30%), Positives = 279/572 (48%), Gaps = 39/572 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR---KPWIRSLHRTDKLG 57
           ++   + I + E  KLG++D VV S+ L +  R       A+R   +P          + 
Sbjct: 126 LITTGRYILAGEALKLGILDKVVNSDPLEEAIRF------AQRVSDQPLESRRLFNKPIP 179

Query: 58  SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
           SL     +   A L+ +K  P     +AC+  ++  + +    G  KE ++F+ L+    
Sbjct: 180 SLPNMDTIFSEALLKMRKQHPGCLAQEACVRAVQAAVQYPYEVGSKKEEELFQYLLQSGQ 239

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVV 174
           +R L + F A+R  +K  + +    K    + +  V V+G G MG GI  +     I V+
Sbjct: 240 ARALQYAFLAERKANKWSSPSGASWKTASAQPISSVGVVGLGTMGRGIVISFARAGIPVI 299

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--EFKDVDMVIE 232
             + +   L    K I + +    ++      ++ +A    K  L  S  E   VD+VIE
Sbjct: 300 AVDSDKNQLATANKIITSVLEKEASK----MQQSGHAWSGPKPRLTSSMKELGGVDLVIE 355

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + LK+++F+EL   C P   L TNTS +D++ +   TS    +IG HFFSPAH+M
Sbjct: 356 AVFEDMSLKKQVFAELSAVCKPEAFLCTNTSALDVDELASSTSRPHLVIGTHFFSPAHIM 415

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
            LLE++ +  +S   I  +M + K IKK+ VVVGNC GF  NR   PY      L+  G 
Sbjct: 416 KLLEVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGS 475

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQS 400
               +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  
Sbjct: 476 KPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-C 534

Query: 401 PLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
           P+ D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P  ++
Sbjct: 535 PIPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRETHHI----EPRIIS 590

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
             EI+E  L+ ++NE+ R+L EGI      +D   + G  +P +RGG +F+A  VG   V
Sbjct: 591 RDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHRGGPMFYASTVGLPTV 650

Query: 519 YTSLKKWSQLYGNF--FKPSRFLEERATKGIP 548
              L+K+ +   +    +PS +L++ A++G P
Sbjct: 651 LEKLQKYYRQNPDIPQLEPSDYLKKLASQGNP 682


>gi|355559806|gb|EHH16534.1| hypothetical protein EGK_11823 [Macaca mulatta]
          Length = 723

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 177/569 (31%), Positives = 279/569 (49%), Gaps = 43/569 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTSEELLKVSRLWAL----DIAARR---KPWIRSLHRTDKLGS 58
           + I + E  KLG++D VV S+ + +  R         + +RR   KP I+SL   D + S
Sbjct: 156 RHILAGEALKLGILDKVVNSDPVEEAIRFAQTVSDQPLESRRLCNKP-IQSLPNMDTIFS 214

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
                EVL    L+ +K  P     +AC+  ++  + +    G+ KE ++F  L     +
Sbjct: 215 -----EVL----LKMQKQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLFQSGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + FFA+R  +K    +    K    + V  V V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFFAERKANKWSTPSGASWKTASAQPVSSVGVVGLGTMGRGIVISFARARIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            + +   L    K I + +    +  K+ Q     +    K      E   VD+VIEAV 
Sbjct: 326 VDSDKNQLSTANKIITSVLEKEAS--KMQQSGHPWSGPKPKLTSSVKELGGVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+++F+EL   C P   L TNTS +D++ +   T     +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M + K IKK+ VVVGNC GF  NR   PY      L+  G    
Sbjct: 444 EVIPSRYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQTYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
            +D  +  FG  +GPF++ DLAG  V   + K      P            +R +  P+ 
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIP 562

Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
           D+L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I    +P ++++ E
Sbjct: 563 DMLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSQYRETYHI----EPRTISQDE 618

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I+E  L+ ++NE+  +L EGI      +D   + G  +P ++GG +F+A  VG   V   
Sbjct: 619 ILERCLYSLINEAFHILGEGIATSPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678

Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
           L+K+ +   +    +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707


>gi|149731446|ref|XP_001498786.1| PREDICTED: peroxisomal bifunctional enzyme [Equus caballus]
          Length = 723

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 174/568 (30%), Positives = 280/568 (49%), Gaps = 41/568 (7%)

Query: 6   KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
           + I ++E  KLG++D +V S   EE +K++ R+    + +RR   KP ++SL   D +  
Sbjct: 156 RCILADEALKLGILDEIVNSDPVEEAIKLAQRVSDQPLESRRLYNKP-VQSLPNMDTI-- 212

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            SEA        L+ +K  P     + C+  ++  + +    G+ KE ++F  L+    +
Sbjct: 213 FSEAL-------LKMRKQYPGCLSQETCVRAVQAAVQYPYEVGIKKEEELFMYLLESGQA 265

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R L + F A+R   K    +    K   PR +    V+G G MG GI  +     I V+ 
Sbjct: 266 RALQYAFLAERNARKWSTPSGASWKTASPRPISSAGVVGLGTMGRGIVISLAKAKIPVIA 325

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
            E + + L    K I + +   V++ + +    +     L   +   E  DVD+VIEAV 
Sbjct: 326 VESDKKQLEIANKIITSALEREVSKMQQSGHPWSGPKPRLTTAM--KELSDVDLVIEAVF 383

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LK+K+F+EL   C P   L TNTS +D++ +   T+    +IG HFFSPAHVM LL
Sbjct: 384 EEMNLKKKVFAELSAVCKPEAFLCTNTSALDVDEIASSTNRPHLVIGTHFFSPAHVMKLL 443

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++ +  +S   I  +M + K I+K  VVVGNC  F  NR    Y      L+  G    
Sbjct: 444 EVIPSRYSSPTTIATVMNLSKKIQKFGVVVGNCFSFVGNRMLNSYYNQTYFLLEEGSKPE 503

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP-----------DRSFQSPLVD 404
            ID  +  FG  +GPF++ DLAG  V   + K      P           D     P+ D
Sbjct: 504 EIDQVLEEFGFKLGPFRVSDLAGLDVGWKSRKGRGLTGPTLPPGTPARKRDNRRYCPIPD 563

Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
           +L + GR G+  GKG Y Y+K  G   KPDP +   + + R   +I+P      +++ EI
Sbjct: 564 MLCELGRFGQKTGKGWYQYDKPLGKIHKPDPWLSKFLSQYRETYHIVPR----IISQDEI 619

Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
           +E  L+ ++NE+ R+L +GI      +D   + G  +P ++GG +F+A  VG   V   L
Sbjct: 620 LERCLYSLINEAFRILGDGIAASPEHIDVIYLHGYKWPRHKGGPMFYASTVGLPTVLEKL 679

Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP 548
           +K+ +   +    +P  +L++ A++G P
Sbjct: 680 QKYYRQNPDIPQLEPCNYLKKLASQGNP 707


>gi|432527120|ref|ZP_19764213.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE233]
 gi|431063379|gb|ELD72628.1| fatty acid oxidation complex subunit alpha [Escherichia coli
           KTE233]
          Length = 714

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 277/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++  + +P  R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPYSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+   G P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKIGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702


>gi|254447746|ref|ZP_05061211.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
           HTCC5015]
 gi|198262526|gb|EDY86806.1| fatty acid oxidation complex alpha subunit [gamma proteobacterium
           HTCC5015]
          Length = 766

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 20/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           +ML S+ +  ++  K+GLID +V SE L + +   AL   A R      L + + L  L+
Sbjct: 217 LMLTSRQLKPKQALKMGLIDQIVGSEALEERAVALALKSTAPRPAKSMELSQ-EALQELA 275

Query: 61  EARE------VLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELV 113
             +       V   AR QA KKT  N P  +  +  +E+G  HG  +G  +EA+ F +L 
Sbjct: 276 LEKNPVGRKVVFDQARKQAAKKTYGNYPAPERIIGAVEKGFSHGIEAGYEEEAQAFGDLA 335

Query: 114 MLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIY 172
           M D S+ L  +F A  A  K   V D  ++ R + +V V+G GLMG+GIA   +    + 
Sbjct: 336 MSDVSKQLRGIFHATNALKKETFVADESVETRTIERVGVLGAGLMGAGIALNTVAKAKLP 395

Query: 173 VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 232
           V LK+ +++ L  G+  +          G ++Q  A  A + +     Y+ FK +D+V+E
Sbjct: 396 VRLKDRDAKGLSHGVGYVAKYYDKRAKLGAMSQFDAEAAKRQVTYTDQYTGFKRLDLVVE 455

Query: 233 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVM 292
           AV E + LK ++  + E     + I A+NTS+I ++ + +     + +IG H+FSP   M
Sbjct: 456 AVFEDLGLKHQMLKDTEANGNENTIFASNTSSIPISDIAKAAKRPENVIGLHYFSPVEKM 515

Query: 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV 352
           PLLEI+ T++T+ +V    +  GK   K  +VV +  GF   R   PY   A  L+  GV
Sbjct: 516 PLLEIITTDKTAPEVTKGCVAFGKAQGKTVIVVKDGPGFYTTRILAPYLNEASRLLLEGV 575

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP-LVDLLLKSGR 411
               +D A++ FG P+GP  LLD  G  V        + AF +R  QSP   D +++ G 
Sbjct: 576 GPKELDKALQQFGYPVGPITLLDEVGIDVGTKVGPVLEAAFGER-MQSPDAADRMIEKGF 634

Query: 412 NGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
            G+  GKG Y Y  G K K      P+ +E     N+ P   P  V   E    ++   +
Sbjct: 635 LGRKAGKGFYLYGDGVKGK------PVNQEVFDAMNVTPWKNPDLVAAAERCTWMM---I 685

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+   L+EGI+ +    D  ++ G+ FP + GG   + D++G       L+  ++ +G 
Sbjct: 686 NEAAFCLQEGIIQQPMHGDIGAIFGLGFPPFLGGPFRYMDSLGLQASVQKLETLAERHGE 745

Query: 532 FFKPSRFLEERA 543
            F+P++ L + A
Sbjct: 746 HFQPAQILVDMA 757


>gi|386020357|ref|YP_005938381.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas stutzeri DSM 4166]
 gi|327480329|gb|AEA83639.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas stutzeri DSM 4166]
          Length = 715

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/558 (30%), Positives = 272/558 (48%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+  +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETSKAFVAGQAGPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             LV +F + +   K     D   + R V+  AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLVGLFLSDQELKKKAKAYD--KQARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT +K   AL  ++  + Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K  + +E+E       I+A+NTSTI ++ + +     +   G HFF+P H+MPL+E++
Sbjct: 406 KVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+TS   I   +   K + K PVVV +C GF VNR  FPY       ++ GVD  R D
Sbjct: 466 RGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVRAD 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR        VD++  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP       PI+ E R LS+            ++I+  ++ 
Sbjct: 586 GKGFYAYEMDKKGKPKKVVDPQAYELLKPIVAETRELSD------------EDIINYMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G      +  K++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVATADKYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAANG 710


>gi|258621811|ref|ZP_05716842.1| 3-hydroxyacyl-CoA dehydrogenase [Vibrio mimicus VM573]
 gi|258586042|gb|EEW10760.1| 3-hydroxyacyl-CoA dehydrogenase [Vibrio mimicus VM573]
          Length = 708

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 287/553 (51%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           ++L  K + +++  KLG++DA V    LL V++   L+    +K    +L   +KL  + 
Sbjct: 168 LILTGKQLRAKKAKKLGIVDACVPHSVLLDVAK-RVLEEKGHKKRAQAALPIKEKLMANT 226

Query: 60  SEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
              R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   
Sbjct: 227 GLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRE 286

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGL--KPRGVRKVAVIGGGLMGSGIATAHILN-NIYVV 174
           S+ L  +FFA     K     D+G   KP G++ V V+GGGLMG+GI+   +    + V 
Sbjct: 287 SKALRSIFFATTEMKK-----DLGADAKPAGIKAVGVLGGGLMGAGISHVSVAKAKVPVR 341

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V ++ +L  +            R  L++ +    +  L G  D+  F   D+VIEAV
Sbjct: 342 IKDVANDGVLNALNYNYKLFDKQKQRKILSKAQLQAQMSQLSGGTDFVGFDRCDVVIEAV 401

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQ++ +++E    P  I ATNTS++ ++ +  +    + I+G H+FSP   MPL
Sbjct: 402 FEDLKLKQQMVADIEANAKPSTIFATNTSSLPIHQIASQAQRPENIVGLHYFSPVEKMPL 461

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           +E++    TS + I  ++ + +   K P+VV +C GF VNR   PY   A  ++  G  +
Sbjct: 462 VEVIPHATTSDETIATVVALARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMTGEPI 521

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNG 413
             +D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G
Sbjct: 522 EDLDTALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKG 580

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           + +GKG YTY+   K   D SV        +L  + P  K   + +K+I    L P++NE
Sbjct: 581 RKSGKGFYTYKGSKKKDVDKSVY-------KLLKLTPESK---LNDKDIAMRCLLPMLNE 630

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F
Sbjct: 631 AVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERF 690

Query: 534 KPSRFLEERATKG 546
            P   L  RA  G
Sbjct: 691 APCDGLLTRAGLG 703


>gi|384101667|ref|ZP_10002704.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
 gi|383840812|gb|EID80109.1| 3-hydroxyacyl-CoA dehydrogenase [Rhodococcus imtechensis RKJ300]
          Length = 687

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 258/524 (49%), Gaps = 19/524 (3%)

Query: 11  EEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 70
           E+  + GLID VVT     +  R      A R K  +R+L         ++  EV ++A 
Sbjct: 172 EQAHREGLIDEVVTGSPRAQAIRFAR---ALRGKRILRNLPVRG-----ADPGEVEQVAT 223

Query: 71  LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 130
              +++A   PQ  A +  I  G           E   F  L     S  L H+FFA+RA
Sbjct: 224 TALRRSA--RPQTVAAVGAILMGGSAPADRAFQHERAEFNRLRNGTESSALRHLFFARRA 281

Query: 131 TSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190
             K          PR ++ V V+G G MG+GIA A +   + VVL +   +      + +
Sbjct: 282 ALKANRPA----LPRELKSVGVVGAGTMGAGIARAFVEAGVPVVLVDQQRQAAAAAAERL 337

Query: 191 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEK 250
           +   +G+VTRG+LT+  A + L +L       + ++ D+VIEAV E + +KQ +  +LE 
Sbjct: 338 QRTYQGMVTRGRLTESDAQHHLSLLTAGTTIRDLEETDLVIEAVYEDLEVKQTVLRQLEA 397

Query: 251 ACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILD 310
              PH  LATNTS +D+N +    +   R++G HFFSPAH   +LEIVR E+TS + +  
Sbjct: 398 VLRPHVPLATNTSYLDVNEIAAAVARPTRVLGMHFFSPAHRAAVLEIVRGEKTSTEALDV 457

Query: 311 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGP 370
            +T  K+++K+P++ G C GF  NR +  Y +   L++  G    ++D+A+  FG  +GP
Sbjct: 458 ALTAAKVLEKMPILAGVCDGFIGNRIYNAYRRQCELMLEEGALPQQVDAALTEFGFAMGP 517

Query: 371 FQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-P 429
           F + D++G  +A    K    A   R     + D L + GR G+  G G Y +E GS+ P
Sbjct: 518 FAVSDMSGLDIAWRMRKSKAGARDPRERYPDVADALCELGRFGQKTGDGWYHFEPGSRTP 577

Query: 430 KPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 489
            PD +V  +IE+  +   I       + T ++IV   L  + NE+  +L + I  R SD+
Sbjct: 578 HPDSTVEALIEQSSQRKAITRA----AFTSQDIVTRALVTMANEAALLLADKIADRPSDI 633

Query: 490 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           D    LG  FP++ GGI  W       ++   L   +   G+ F
Sbjct: 634 DLMLTLGYGFPTHEGGITHWVGRQDRRFLEHELDALAARTGHGF 677


>gi|378954267|ref|YP_005211754.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Gallinarum/pullorum
           str. RKS5078]
 gi|438131333|ref|ZP_20873626.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Pullorum
           str. ATCC 9120]
 gi|357204878|gb|AET52924.1| putative fatty acid oxidation complex alpha subunit [Salmonella
           enterica subsp. enterica serovar Gallinarum/pullorum
           str. RKS5078]
 gi|434941548|gb|ELL47977.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Pullorum
           str. ATCC 9120]
          Length = 715

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 172/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  K GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  VFFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAVFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +  ++ +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKANERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           +  + +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAEYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|410611602|ref|ZP_11322697.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
 gi|410168805|dbj|GAC36586.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola psychrophila 170]
          Length = 727

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 185/554 (33%), Positives = 277/554 (50%), Gaps = 25/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML   SI +++    G++D +V    LL V    A+++A + KP  R+  + D +G   
Sbjct: 187 MMLTGASIRAKQAKNYGIVDHMVPQSILLDV----AIEMAKKPKPK-RNGPKLDLMGRFL 241

Query: 61  EAREV-----LKLARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 114
           E   V      K AR Q A KT  N P  +  +D IE G+  G   G+  EAK F  LVM
Sbjct: 242 ENTSVGRNLMFKQARKQTASKTQGNYPSPELIIDCIETGLSKGFKKGLEVEAKHFGHLVM 301

Query: 115 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYV 173
              S  L  +FFA     K   V   G+KP  ++KV V+GGGLMG GIA        +  
Sbjct: 302 SPESAALRSLFFATTDMKKETGVE--GVKPASLKKVGVLGGGLMGGGIAFVTATKAGLPA 359

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            +K++ SE +   IK     +   V RG + +      + +L G +DY+ F D D+VIEA
Sbjct: 360 RIKDIRSEGIANAIKYSFDILNKKVKRGFMHKSDMQKQMALLTGSVDYAGFSDADVVIEA 419

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LKQ + +E+E  C  H I A+NTS+I +  +  K    +++IG H+FSP   MP
Sbjct: 420 VFEDLTLKQNMVAEIEANCAEHTIFASNTSSIPITQIAAKAKRPEQVIGLHYFSPVDKMP 479

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVD 353
           L E++  ++TS   I   + + K   K P+VV +  GF VNR   PY   A  ++  G  
Sbjct: 480 LAEVIAHDKTSDLTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNEAAEVLLSGEP 539

Query: 354 VFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNG 413
           +  ID ++  FG P+GP +LLD  G  V A      +  F DR   +P  D +L   R G
Sbjct: 540 IAHIDRSLVKFGFPVGPVKLLDEVGIDVGAKIGPILEAQFGDRFASNPGFDKILADDRKG 599

Query: 414 KANGKGLYTYE-KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           K N +G Y Y  K    + D S+  ++        I P  K   ++ ++I E  +  ++N
Sbjct: 600 KKNKRGFYDYSGKKLGKEVDSSIYTLL-------GITPASK---MSHEQIAERCVLLMLN 649

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+   L+EG+V  A D D  ++ G+ FP + GG   +   +G   V   L+ +  L GN 
Sbjct: 650 EAAMCLDEGVVRNARDGDIGAIFGIGFPPFLGGPFRYMHTLGIANVVARLEHYQGLLGNK 709

Query: 533 FKPSRFLEERATKG 546
           F P+  L++ A +G
Sbjct: 710 FTPADSLKKMAEEG 723


>gi|157144722|ref|YP_001452041.1| multifunctional fatty acid oxidation complex subunit alpha
           [Citrobacter koseri ATCC BAA-895]
 gi|166972667|sp|A8ADP2.1|FADJ_CITK8 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|157081927|gb|ABV11605.1| hypothetical protein CKO_00449 [Citrobacter koseri ATCC BAA-895]
          Length = 715

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/555 (30%), Positives = 276/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +  ++  ++GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRPKQALRVGLVDEVVPHAILLEA----AVELAIKGRSAQRNLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L        +++   +KT  N P  +  L+VIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRTLLFRMVSKKTGQKTQGNYPATERILEVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L ++FFA     K P  +D    P     V   G    G    TA     + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAQPGPLASVGVLGGGLMGGGIAYVTA-CKGGLSVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NAKGINHALKYSWDQLETKVRRRHIKAGERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C PH I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 ALKQQMVAEVEQNCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  L++ G  V  ID
Sbjct: 461 PHATTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRLLTEGERVEAID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY---EKGSKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y    + SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGVKGRKSKKQVDPAIYRLIGTQGQSRLS------------AQQMAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + D +GA  V   L++ +  YG+
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGEVVAVLQRLATQYGD 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L   A +G
Sbjct: 688 RFTPCERLLRMAERG 702


>gi|149728089|ref|XP_001502833.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial [Equus
           caballus]
          Length = 762

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/566 (30%), Positives = 279/566 (49%), Gaps = 32/566 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           MML  ++I ++   K+GL+D +V             T E L +V+  +A  +A ++    
Sbjct: 199 MMLTGRNIHADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEEVAVTFAKGLADKKISPK 258

Query: 48  RSLHRTDKLGSLSEA-----REVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYSG 101
           R     DKL S++       +++ K    + +K    + P     +DV++ GI  G  +G
Sbjct: 259 RDKGLVDKLTSVAMGIPFVRQQIYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAG 318

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSG 161
            L E++ F EL M   S+ L+ ++  Q    K       G   + V+ +A++G GLMG+G
Sbjct: 319 YLSESQKFGELAMTKESKALIGLYHGQVLCKK----NKFGAPQKEVKHLAILGAGLMGAG 374

Query: 162 IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221
           IA   +   +  +LK+     L +G + +   +   V +  LT  + ++    L G LDY
Sbjct: 375 IAQVSVDKGLKTILKDATLAGLGRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDY 434

Query: 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRII 281
             F+  DMVIEAV E + LK ++  E+E   P HC+ A+NTS + +N +   +   +++I
Sbjct: 435 QGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCVFASNTSALPINEISAVSKRPEKVI 494

Query: 282 GAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 341
           G H+FSP   M LLEI+ TE+TS       + VG    KV +VV +  GF   R   P  
Sbjct: 495 GMHYFSPVDKMQLLEIITTEKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMM 554

Query: 342 QSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP 401
                ++  GVD  ++DS   SFG P+G   L+D  G  VA   +++  KAF +R F   
Sbjct: 555 SEVIRILQEGVDPKKLDSLTTSFGFPVGAATLVDEVGVDVARHVAEDLGKAFGER-FGGG 613

Query: 402 LVDLL---LKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVT 458
            +DLL   +  G  G+ +GKG Y Y++G K K   S +  I     L+++    K    +
Sbjct: 614 SLDLLKQMVSKGFLGRKSGKGFYIYQEGVKSKNLNSDMDSI-----LASLKIPPKSEVSS 668

Query: 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYV 518
           +++I   ++   VNE+   L+EGI+   ++ D  +V G+ FP   GG   + D  GA  +
Sbjct: 669 DEDIQYRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKI 728

Query: 519 YTSLKKWSQLYGNFFKPSRFLEERAT 544
              L+K+   YG  F P + L + A 
Sbjct: 729 VDRLRKYEAAYGKQFTPCQLLVDHAN 754


>gi|153822384|ref|ZP_01975051.1| fatty oxidation complex, alpha subunit [Vibrio cholerae B33]
 gi|229510972|ref|ZP_04400451.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae B33]
 gi|229518093|ref|ZP_04407537.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae RC9]
 gi|229608377|ref|YP_002879025.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae MJ-1236]
 gi|254848176|ref|ZP_05237526.1| fatty oxidation complex [Vibrio cholerae MO10]
 gi|9655512|gb|AAF94206.1| fatty oxidation complex, alpha subunit [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|126520091|gb|EAZ77314.1| fatty oxidation complex, alpha subunit [Vibrio cholerae B33]
 gi|229344808|gb|EEO09782.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae RC9]
 gi|229350937|gb|EEO15878.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae B33]
 gi|229371032|gb|ACQ61455.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae MJ-1236]
 gi|254843881|gb|EET22295.1| fatty oxidation complex [Vibrio cholerae MO10]
          Length = 724

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 184 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTD 243

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 244 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 303

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 304 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 358

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 359 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 418

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 419 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 478

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 479 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 538

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 539 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 597

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 598 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 647

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 648 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 707

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 708 PCDGLLTRAGLG 719


>gi|161582013|ref|NP_230692.2| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae O1 biovar El Tor str. N16961]
 gi|255745465|ref|ZP_05419413.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholera CIRS 101]
 gi|360034949|ref|YP_004936712.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae O1 str. 2010EL-1786]
 gi|417813077|ref|ZP_12459734.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-49A2]
 gi|417815942|ref|ZP_12462574.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HCUF01]
 gi|418332088|ref|ZP_12943024.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-06A1]
 gi|418336834|ref|ZP_12945732.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-23A1]
 gi|418343345|ref|ZP_12950133.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-28A1]
 gi|418348502|ref|ZP_12953236.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-43A1]
 gi|418355045|ref|ZP_12957766.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-61A1]
 gi|419825553|ref|ZP_14349057.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1033(6)]
 gi|421316281|ref|ZP_15766852.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1032(5)]
 gi|421320670|ref|ZP_15771227.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1038(11)]
 gi|421324664|ref|ZP_15775190.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1041(14)]
 gi|421328325|ref|ZP_15778839.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1042(15)]
 gi|421338813|ref|ZP_15789248.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-20A2]
 gi|421347384|ref|ZP_15797766.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-46A1]
 gi|422891160|ref|ZP_16933545.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-40A1]
 gi|422902041|ref|ZP_16937374.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-48A1]
 gi|422906252|ref|ZP_16941085.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-70A1]
 gi|422912841|ref|ZP_16947360.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HFU-02]
 gi|422925322|ref|ZP_16958347.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-38A1]
 gi|423144641|ref|ZP_17132250.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-19A1]
 gi|423149320|ref|ZP_17136648.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-21A1]
 gi|423153137|ref|ZP_17140331.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-22A1]
 gi|423155948|ref|ZP_17143052.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-32A1]
 gi|423159775|ref|ZP_17146743.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-33A2]
 gi|423164489|ref|ZP_17151251.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-48B2]
 gi|423730613|ref|ZP_17703927.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-17A1]
 gi|423752575|ref|ZP_17711942.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-50A2]
 gi|423892315|ref|ZP_17725998.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-62A1]
 gi|423927093|ref|ZP_17730615.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-77A1]
 gi|424001636|ref|ZP_17744722.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-17A2]
 gi|424005797|ref|ZP_17748777.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-37A1]
 gi|424023814|ref|ZP_17763474.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-62B1]
 gi|424026607|ref|ZP_17766220.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-69A1]
 gi|424594635|ref|ZP_18033968.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1040(13)]
 gi|424610063|ref|ZP_18048917.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-39A1]
 gi|424612867|ref|ZP_18051670.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-41A1]
 gi|424616685|ref|ZP_18055372.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-42A1]
 gi|424621633|ref|ZP_18060156.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-47A1]
 gi|424644608|ref|ZP_18082356.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-56A2]
 gi|424652286|ref|ZP_18089762.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-57A2]
 gi|424656191|ref|ZP_18093489.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-81A2]
 gi|440709319|ref|ZP_20889976.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
           [Vibrio cholerae 4260B]
 gi|443503143|ref|ZP_21070125.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-64A1]
 gi|443507051|ref|ZP_21073835.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-65A1]
 gi|443511168|ref|ZP_21077825.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-67A1]
 gi|443514726|ref|ZP_21081257.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-68A1]
 gi|443518531|ref|ZP_21084941.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-71A1]
 gi|443523418|ref|ZP_21089647.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-72A2]
 gi|443531031|ref|ZP_21097046.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-7A1]
 gi|443534805|ref|ZP_21100701.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-80A1]
 gi|443538374|ref|ZP_21104229.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-81A1]
 gi|449056450|ref|ZP_21735118.1| Enoyl-CoA hydratase [Vibrio cholerae O1 str. Inaba G4222]
 gi|83288151|sp|Q9KT58.2|FADJ_VIBCH RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|255736540|gb|EET91937.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholera CIRS 101]
 gi|340041668|gb|EGR02634.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HCUF01]
 gi|340042381|gb|EGR03346.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-49A2]
 gi|341623946|gb|EGS49462.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-70A1]
 gi|341624389|gb|EGS49888.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-48A1]
 gi|341625290|gb|EGS50753.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-40A1]
 gi|341639666|gb|EGS64277.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HFU-02]
 gi|341647635|gb|EGS71712.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-38A1]
 gi|356419500|gb|EHH73047.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-06A1]
 gi|356420237|gb|EHH73765.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-21A1]
 gi|356425499|gb|EHH78869.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-19A1]
 gi|356431937|gb|EHH85136.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-22A1]
 gi|356432412|gb|EHH85609.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-23A1]
 gi|356436606|gb|EHH89718.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-28A1]
 gi|356442248|gb|EHH95110.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-32A1]
 gi|356447241|gb|EHI00032.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-43A1]
 gi|356449373|gb|EHI02127.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-33A2]
 gi|356453447|gb|EHI06110.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-61A1]
 gi|356455833|gb|EHI08468.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-48B2]
 gi|356646103|gb|AET26158.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae O1 str. 2010EL-1786]
 gi|395920334|gb|EJH31156.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1041(14)]
 gi|395921238|gb|EJH32058.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1032(5)]
 gi|395923652|gb|EJH34463.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1038(11)]
 gi|395929831|gb|EJH40580.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1042(15)]
 gi|395943761|gb|EJH54435.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-20A2]
 gi|395946444|gb|EJH57108.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-46A1]
 gi|395961014|gb|EJH71358.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-56A2]
 gi|395962454|gb|EJH72752.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-57A2]
 gi|395965429|gb|EJH75599.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-42A1]
 gi|395973146|gb|EJH82717.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-47A1]
 gi|408008674|gb|EKG46633.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-39A1]
 gi|408015277|gb|EKG52867.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-41A1]
 gi|408035677|gb|EKG72134.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1040(13)]
 gi|408056062|gb|EKG90961.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-81A2]
 gi|408609634|gb|EKK83010.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1033(6)]
 gi|408626218|gb|EKK99097.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-17A1]
 gi|408638909|gb|EKL10769.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-50A2]
 gi|408657004|gb|EKL28095.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-77A1]
 gi|408658358|gb|EKL29428.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-62A1]
 gi|408847196|gb|EKL87267.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-37A1]
 gi|408848384|gb|EKL88432.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-17A2]
 gi|408871982|gb|EKM11209.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-62B1]
 gi|408880388|gb|EKM19313.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-69A1]
 gi|439974908|gb|ELP51044.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase
           [Vibrio cholerae 4260B]
 gi|443432454|gb|ELS74982.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-64A1]
 gi|443436084|gb|ELS82207.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-65A1]
 gi|443439872|gb|ELS89568.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-67A1]
 gi|443443970|gb|ELS97252.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-68A1]
 gi|443447580|gb|ELT04222.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-71A1]
 gi|443450518|gb|ELT10793.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-72A2]
 gi|443458114|gb|ELT25510.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-7A1]
 gi|443461956|gb|ELT33011.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-80A1]
 gi|443465963|gb|ELT40622.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-81A1]
 gi|448264273|gb|EMB01512.1| Enoyl-CoA hydratase [Vibrio cholerae O1 str. Inaba G4222]
          Length = 708

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTD 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 228 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 343 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 403 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 463 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 523 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 582 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 631

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 632 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 691

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 692 PCDGLLTRAGLG 703


>gi|424808035|ref|ZP_18233437.1| fatty oxidation complex, alpha subunit [Vibrio mimicus SX-4]
 gi|342324572|gb|EGU20353.1| fatty oxidation complex, alpha subunit [Vibrio mimicus SX-4]
          Length = 708

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 287/553 (51%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           ++L  K + +++  KLG++DA V    LL V++   L+    +K    +L   +KL  + 
Sbjct: 168 LILTGKQLRAKKAKKLGIVDACVPHSVLLDVAK-RVLEEKGHKKRAQAALPIKEKLMANT 226

Query: 60  SEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
              R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   
Sbjct: 227 GLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRE 286

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGL--KPRGVRKVAVIGGGLMGSGIATAHILN-NIYVV 174
           S+ L  +FFA     K     D+G   KP G++ V V+GGGLMG+GI+   +    + V 
Sbjct: 287 SKALRSIFFATTEMKK-----DLGADAKPAGIKAVGVLGGGLMGAGISHVSVAKAKVPVR 341

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V ++ +L  +            R  L++ +    +  L G  D+  F   D+VIEAV
Sbjct: 342 IKDVANDGVLNALNYNYKLFDKQKQRKILSKAQLQAQMSQLSGGTDFVGFDRCDVVIEAV 401

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQ++ +++E    P  I ATNTS++ ++ +  +    + I+G H+FSP   MPL
Sbjct: 402 FEDLKLKQQMVADIEANAKPSTIFATNTSSLPIHQIASQAQRPENIVGLHYFSPVEKMPL 461

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           +E++    TS + I  ++ + +   K P+VV +C GF VNR   PY   A  ++  G  +
Sbjct: 462 VEVIPHATTSDETIATVVALARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMTGEPI 521

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNG 413
             +D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G
Sbjct: 522 EDLDTALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKG 580

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           + +GKG YTY+   K   D SV        +L  + P  K   + +K+I    L P++NE
Sbjct: 581 RKSGKGFYTYKGSKKKDVDKSVY-------KLLKLTPESK---LNDKDIAMRCLLPMLNE 630

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F
Sbjct: 631 AVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERF 690

Query: 534 KPSRFLEERATKG 546
            P   L  RA  G
Sbjct: 691 APCDGLLTRAGLG 703


>gi|261346522|ref|ZP_05974166.1| fatty oxidation complex, alpha subunit FadB [Providencia
           rustigianii DSM 4541]
 gi|282565226|gb|EFB70761.1| fatty oxidation complex, alpha subunit FadB [Providencia
           rustigianii DSM 4541]
          Length = 730

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 174/558 (31%), Positives = 273/558 (48%), Gaps = 34/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K ++  +  KLGL+DAVV +E+L       ++ +   A++   +R+P + +L    KL  
Sbjct: 171 KDVSGTQALKLGLVDAVVETEKLPQAALQIIEQAIAGAINWKQKRQPKLETL----KLSP 226

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +         +  +    + P     ++ IE+         +  E   F  L   D +
Sbjct: 227 IEQTMSFSVAKGMVYQVAGKHYPAPMTAVNTIEKAANCTREEALKHETAAFVPLAHSDVA 286

Query: 119 RGLVHVFFAQ---RATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
           R LV VF      +ATSK      I  K     + AV+G G+MG GIA       I V++
Sbjct: 287 RALVSVFLNDQQVKATSK-----KIAGKVTAPTQAAVLGAGIMGGGIAYQSASKGIAVLM 341

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K++N + L  GI   +  + G   RGK+T D+    L  +   L YS  ++V +++EAV+
Sbjct: 342 KDINEKSLDLGINEAKKLLNGQFERGKITADRMATTLASIHPSLSYSGIENVQIIVEAVV 401

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E+  +K  + SE+E       +LA+NTSTI +  +       +   G HFF+P H MPL+
Sbjct: 402 ENPKIKAAVLSEVESLITSETLLASNTSTIPITELANSLKRPENFCGMHFFNPVHRMPLV 461

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           EI+R E+TS + I  +++    + K P+VV +C GF VNR  FPY     LL+  G D  
Sbjct: 462 EIIRGEKTSEETIAKVVSFANKMGKTPIVVNDCPGFFVNRVLFPYFAGFNLLIQDGADFR 521

Query: 356 RIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRN 412
            ID  + + FG P+GP  LLD+ G   A    +   + FP R        +D++ +  R 
Sbjct: 522 EIDKVMEKEFGWPMGPAYLLDVVGIDTAFHAEQVMAQGFPQRMQKVGKNAIDIMFEQQRF 581

Query: 413 GKANGKGLYTYEKGSKPKP----DPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           G+ NGKG Y YE   K KP    DP    ++   R+           S T++EI+  ++ 
Sbjct: 582 GQKNGKGFYLYETDKKGKPKKIDDPHTDELLFAIRQNKR--------SFTKEEIIARMMA 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+VNE  R LEEGI+   SD D A V G+ FP +RGG+  + D +G+     + + +S L
Sbjct: 634 PMVNEVVRCLEEGIIQSPSDADIALVYGLGFPPFRGGVFCYLDTLGSQSYVKTAESYSHL 693

Query: 529 YGNFFKPSRFLEERATKG 546
              +  P+   E+ AT  
Sbjct: 694 SPLYQVPNGLKEKAATNA 711


>gi|416566914|ref|ZP_11764041.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 4441 H]
 gi|363579264|gb|EHL63055.1| multifunctional fatty acid oxidation complex subunit alpha
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 4441 H]
          Length = 715

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/548 (31%), Positives = 275/548 (50%), Gaps = 28/548 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + + +  + GL+D VV    LL+     A+++A + +   R+L   +++  G 
Sbjct: 167 MILTGKQLRARQALRAGLVDDVVPQTILLEA----AVELAKKERLAQRTLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +  A+KT  N P  +  +DVIE G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFRLVRKKTAQKTQGNYPATERIIDVIETGLAQGSSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRAIFFASTEVKKDPG-SDAPPGPLNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N++ +   +K     +   V R  +   + +  L ++ G  DY  F   D+VIEAV E +
Sbjct: 341 NTQGINHALKYSWDLLETKVRRRHIKASERDKQLALISGSTDYRGFSHRDLVIEAVFEDL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
           PLKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+E++
Sbjct: 401 PLKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVSDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVASILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y EKG  SK + DP++  +I  +   RLS             +++ E  +  ++
Sbjct: 580 GRGFYLYGEKGRKSKKQVDPAIYKLIGVQGQSRLS------------AQQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R  +E ++  A D D  +V G+ FP + GG   + DA+G   +  +L++ + LYG 
Sbjct: 628 NEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGP 687

Query: 532 FFKPSRFL 539
            + P   L
Sbjct: 688 RYAPCEQL 695


>gi|121728158|ref|ZP_01681193.1| fatty oxidation complex, alpha subunit [Vibrio cholerae V52]
 gi|147673662|ref|YP_001216515.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae O395]
 gi|153215065|ref|ZP_01949782.1| fatty oxidation complex, alpha subunit [Vibrio cholerae 1587]
 gi|153819379|ref|ZP_01972046.1| fatty oxidation complex, alpha subunit [Vibrio cholerae NCTC 8457]
 gi|262151283|ref|ZP_06028418.1| fatty oxidation complex alpha subunit FadJ [Vibrio cholerae INDRE
           91/1]
 gi|262167202|ref|ZP_06034914.1| fatty oxidation complex alpha subunit FadJ [Vibrio cholerae RC27]
 gi|379740871|ref|YP_005332840.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae IEC224]
 gi|384424205|ref|YP_005633563.1| Enoyl-CoA hydratase [Vibrio cholerae LMA3984-4]
 gi|417824118|ref|ZP_12470709.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE48]
 gi|421331344|ref|ZP_15781824.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1046(19)]
 gi|424585935|ref|ZP_18025525.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1030(3)]
 gi|424598500|ref|ZP_18037694.1| fatty oxidation complex, alpha subunit FadJ [Vibrio Cholerae
           CP1044(17)]
 gi|424601245|ref|ZP_18040398.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1047(20)]
 gi|172047408|sp|A5F2P2.1|FADJ_VIBC3 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA hydratase/3-hydroxybutyryl-CoA
           epimerase; Includes: RecName: Full=3-hydroxyacyl-CoA
           dehydrogenase
 gi|121629555|gb|EAX61978.1| fatty oxidation complex, alpha subunit [Vibrio cholerae V52]
 gi|124114928|gb|EAY33748.1| fatty oxidation complex, alpha subunit [Vibrio cholerae 1587]
 gi|126510060|gb|EAZ72654.1| fatty oxidation complex, alpha subunit [Vibrio cholerae NCTC 8457]
 gi|146315545|gb|ABQ20084.1| fatty oxidation complex, alpha subunit [Vibrio cholerae O395]
 gi|262024346|gb|EEY43035.1| fatty oxidation complex alpha subunit FadJ [Vibrio cholerae RC27]
 gi|262030899|gb|EEY49528.1| fatty oxidation complex alpha subunit FadJ [Vibrio cholerae INDRE
           91/1]
 gi|327483758|gb|AEA78165.1| Enoyl-CoA hydratase [Vibrio cholerae LMA3984-4]
 gi|340047803|gb|EGR08726.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae HE48]
 gi|378794381|gb|AFC57852.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae IEC224]
 gi|395932608|gb|EJH43351.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1046(19)]
 gi|395976731|gb|EJH86173.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1030(3)]
 gi|395978187|gb|EJH87577.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           CP1047(20)]
 gi|408044134|gb|EKG80084.1| fatty oxidation complex, alpha subunit FadJ [Vibrio Cholerae
           CP1044(17)]
          Length = 708

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 228 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 343 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 403 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 463 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 523 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 582 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 631

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 632 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 691

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 692 PCDGLLTRAGLG 703


>gi|301070250|gb|ADK55543.1| hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A
           thiolase/enoyl-Coenzyme A hydratase (trifunctional
           protein), alpha subunit [Zonotrichia albicollis]
          Length = 770

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 172/570 (30%), Positives = 283/570 (49%), Gaps = 40/570 (7%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           MML  ++I ++   K+GL+D +V             T E L +V+  +A  +A +     
Sbjct: 207 MMLTGRNIRADRAKKMGLVDQLVEPLGPGLKAPEARTIEYLEEVAIGFARGLANKTVSAK 266

Query: 48  RSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQA---------CLDVIEEGIVHGG 98
           RS     +L   + A   L   R Q  KT  +  Q Q           ++V++ G+  G 
Sbjct: 267 RSKGLMQRLTDYAMA---LPFVRQQVYKTVESKVQKQTKGLYPAPLKIIEVVKTGLDQGR 323

Query: 99  YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLM 158
            +G L E++ F +L +   S+ L+ ++  Q    K       G   + V+ +AV+G GLM
Sbjct: 324 DAGYLIESQSFGQLAVTKESKALMGLYHGQVHCKK----NKFGHPQKEVKTLAVLGAGLM 379

Query: 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 218
           G+GIA   +   I  +LK+   + L +G + +   + G V +  LT  + ++ L  L G 
Sbjct: 380 GAGIAQVSVDKGIKTILKDTAQKGLDRGQQQVYKGLNGKVKKKSLTSFERDSILSNLMGQ 439

Query: 219 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278
           LDY  F+  DMVIEAV E + +K K+  E+E   P HCI A+NTS + ++ +   +   D
Sbjct: 440 LDYKGFEKADMVIEAVFEDISVKHKVLKEVEAVIPTHCIFASNTSALPISQIAAASKRPD 499

Query: 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338
           ++IG H+FSP   M LLEI+ TE+TS       + VG    KV +VV +  GF   R   
Sbjct: 500 KVIGMHYFSPVDKMQLLEIITTEKTSQDTAACAVDVGLKQGKVVIVVKDGPGFYTTRCLG 559

Query: 339 PYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF 398
           P       ++  G+D  ++D+   +FG P+G   L+D  G  VA   +++  KAF  R F
Sbjct: 560 PMLSEVVRVLQEGIDPKKVDAISTAFGFPVGAATLIDEVGVDVATHVAEDLGKAFGQR-F 618

Query: 399 QSPLVD---LLLKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKP 454
               +D   L+++ G  G+  GKG Y Y++G K +  +  +  I+E+ R  +N      P
Sbjct: 619 GGGSIDLFKLMVQKGFLGRKAGKGFYVYQEGVKNRSLNSGMDEILEKFRVPAN------P 672

Query: 455 ISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVG 514
              ++++I   ++   VNE+   L+EGI+    + D  +V G+ FP   GG   +AD+ G
Sbjct: 673 DVCSDEDIQMRLVTRFVNEAAMCLQEGILSNPVEGDIGAVFGLGFPPCLGGPFRFADSYG 732

Query: 515 ANYVYTSLKKWSQLYGNFFKPSRFLEERAT 544
           A  +   L+K+  +YG+ F P + L + A 
Sbjct: 733 ARQLVDKLRKYEAVYGSQFTPCQLLLDHAN 762


>gi|258626243|ref|ZP_05721090.1| 3-hydroxyacyl-CoA dehydrogenase [Vibrio mimicus VM603]
 gi|258581295|gb|EEW06197.1| 3-hydroxyacyl-CoA dehydrogenase [Vibrio mimicus VM603]
          Length = 708

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 174/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL-GSL 59
           ++L  K + +++  KLG++DA V    LL V++   L+    +K    +L   +KL  + 
Sbjct: 168 LILTGKQLRAKKAKKLGIVDACVPHSVLLDVAK-RVLEEKGHKKRAQAALPIKEKLMANT 226

Query: 60  SEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDT 117
              R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   
Sbjct: 227 GLGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKCFAELVMTRE 286

Query: 118 SRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHI---LNNIYVV 174
           S+ L  +FFA     K     D+G   + V   AV   G    G   +H+      + V 
Sbjct: 287 SKALRSIFFATTEMKK-----DLGADAKPVAIKAVGVLGGGLMGAGISHVSVAKAKVPVR 341

Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
           +K+V ++ +L  +            R  L++ +    +  L G  D+  F   D+VIEAV
Sbjct: 342 IKDVANDGVLNALNYNYKLFDKQKQRKILSKAQLQARMSQLSGGTDFVGFDRCDVVIEAV 401

Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
            E + LKQ++ +++E    P  I ATNTS++ ++ +  +    + I+G H+FSP   MPL
Sbjct: 402 FEDLKLKQQMVADIEANAKPSTIFATNTSSLPIHQIASQAQRPENIVGLHYFSPVEKMPL 461

Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
           +E++   +TS + I  ++ + +   K P+VV +C GF VNR   PY   A  ++  G  +
Sbjct: 462 VEVIPHAKTSDETIATVVALARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMTGEPI 521

Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNG 413
             +D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G
Sbjct: 522 ENLDTALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKG 580

Query: 414 KANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
           + +GKG YTY+   K   D SV        +L  + P  K   + +K+I    L P++NE
Sbjct: 581 RKSGKGFYTYKGSKKKDVDKSVY-------KLLKLTPESK---LNDKDIAMRCLLPMLNE 630

Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
           + R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F
Sbjct: 631 AVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERF 690

Query: 534 KPSRFLEERATKG 546
            P   L  RA  G
Sbjct: 691 APCDGLLTRAGLG 703


>gi|148238090|ref|NP_001085618.1| hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA
           hydratase (trifunctional protein), alpha subunit
           [Xenopus laevis]
 gi|49256557|gb|AAH73030.1| MGC82638 protein [Xenopus laevis]
          Length = 760

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 174/568 (30%), Positives = 288/568 (50%), Gaps = 36/568 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARR---- 43
           MML  ++I ++   ++GL+D +V             T E L +V+  +A  IA ++    
Sbjct: 197 MMLTGRNIRADRAKRMGLVDQLVDPLGPGLKSPEERTIEYLEEVAMDYARGIARKKISLK 256

Query: 44  --KPWIRSLHRTDKLGSLSEAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGY 99
             K  I+ +  TD + S+   R+ +   + +   K+T    P     ++V++ G+  G  
Sbjct: 257 KEKGLIQKV--TDYVMSVPFVRQQIYNTVEKKVKKQTKGLYPAPLKIIEVVKTGLDQGQE 314

Query: 100 SGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMG 159
           +G L EA+ F EL M   S+ L+ ++  Q    K       G   R V+K+A++G GLMG
Sbjct: 315 AGYLAEAQKFGELGMTSESKALIGLYHGQVLCKK----NKFGTPERPVQKLAILGAGLMG 370

Query: 160 SGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219
           +GIA   +   +  +LK+   E L +G + +   +   V +  +T  + ++ +  L G L
Sbjct: 371 AGIAQVSVDKGLKTILKDTTIEGLGRGQQQVYKGLNDKVKKKSVTSFERDSIVTNLTGQL 430

Query: 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDR 279
           DY  F+  DMVIEAV E + +K K+  E+E   PPHCI A+NTS + ++ +   +   ++
Sbjct: 431 DYKGFETADMVIEAVFEDISIKHKVLQEVESVVPPHCIFASNTSALPISQIAAASKRPEK 490

Query: 280 IIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 339
           +IG H+FSP   M LLEI+ T++TS       + VG    KV +VV +  GF   R   P
Sbjct: 491 VIGMHYFSPVDKMQLLEIITTDKTSKDTTASAVAVGLKQGKVIIVVKDGPGFYTTRCLGP 550

Query: 340 YSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQ 399
                  ++  GVD  ++D+    FG P+G   L D  G  VAA  +++  KAF +R F 
Sbjct: 551 MMAEVVRVLQEGVDPKKLDALSTGFGFPVGASTLADEVGIDVAAHVAEDLGKAFGER-FG 609

Query: 400 SPLVDLL---LKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPIS 456
              ++LL   +  G  G+ +GKG Y Y++G K +P  S    I E  +L       KP  
Sbjct: 610 GGNIELLKAMVAKGFLGRKSGKGFYIYQQGVKSRPINSGTEEILEKFKLQ-----AKPEV 664

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
            ++++I   ++   VNE+   L+EGI+    + D  +V G+ FP   GG   +ADA GA 
Sbjct: 665 SSDEDIQMRLVSRFVNEAVMCLQEGILANPVEGDIGAVFGLGFPPCLGGPFRYADAFGAK 724

Query: 517 YVYTSLKKWSQLYGNFFKPSRFLEERAT 544
           ++   ++K+  +YG+ F P + L + A 
Sbjct: 725 HIVEKMRKYESVYGSQFTPCQLLIDHAN 752


>gi|153800918|ref|ZP_01955504.1| fatty oxidation complex, alpha subunit [Vibrio cholerae MZO-3]
 gi|124123509|gb|EAY42252.1| fatty oxidation complex, alpha subunit [Vibrio cholerae MZO-3]
          Length = 724

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 184 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 243

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 244 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 303

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 304 KALRSIFFATTEMKK-----DLGANAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 358

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 359 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 418

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 419 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 478

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 479 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 538

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 539 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 597

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 598 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 647

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 648 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 707

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 708 PCDGLLTRAGLG 719


>gi|395507072|ref|XP_003757852.1| PREDICTED: trifunctional enzyme subunit alpha, mitochondrial
           [Sarcophilus harrisii]
          Length = 782

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 281/565 (49%), Gaps = 30/565 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVV-------------TSEELLKVSRLWALDIAARRKPWI 47
           MML  ++I ++   K+GL+D +V             T E L +++  +A ++A ++    
Sbjct: 219 MMLTGRNIRADRAKKMGLVDQLVEPLGPGLKLPEERTVEYLEEIAVNFAKELADKQISGK 278

Query: 48  RSLHRTDKLGSLSEA----REVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSG 101
           +     DK+ S +      R+++  K+     K+T    P     +DV++ GI HGG +G
Sbjct: 279 KDKALIDKVTSYAMTFPFVRQLVYRKVEEKVQKQTKGLYPAPLKIIDVVKTGIEHGGEAG 338

Query: 102 VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSG 161
            L E++ F EL M   S+ L+ ++  Q    K       G   R V ++ ++G GLMG+G
Sbjct: 339 YLSESQKFGELAMTKESKALIGLYHGQVLCKK----NKFGPPQRTVTQLCILGAGLMGAG 394

Query: 162 IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221
           IA   +   +  +LK+ +   L +G + I   +   V +  LT  + ++    L G LDY
Sbjct: 395 IAQVSVDKGLKTILKDTSIVGLGRGQQQIFKGLDEKVKKKTLTSFERDSIYSNLTGQLDY 454

Query: 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRII 281
             F+  DMVIEAV E + LK  +  E+E   P HCI A+NTS + ++ +   +   +++I
Sbjct: 455 QGFEKSDMVIEAVFEDLALKHSVLKEIESVVPAHCIFASNTSALPISEIASVSKRPEKVI 514

Query: 282 GAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYS 341
           G H+FSP   M LLEI+ T++TS   +   ++VG    KV +VV +  GF   R   P  
Sbjct: 515 GMHYFSPVDKMQLLEIITTDKTSQDTVASAVSVGLKQGKVIIVVKDGPGFYTTRCLAPMM 574

Query: 342 QSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQ 399
                ++  G++  ++DS   +FG P+G   L+D  G  VA   S+E  KAF +R     
Sbjct: 575 SEVIRILQEGIEPRKLDSLTTNFGFPVGAATLVDEVGVDVAQHVSEELGKAFGERFGGGN 634

Query: 400 SPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE 459
             L+  ++  G  G+ +GKG Y Y+ G+K K   S +  I     L+ +    +    T 
Sbjct: 635 QELLKQMVNRGFLGRKSGKGFYIYQTGTKSKSLNSGMDEI-----LTGLKVSPRSEVSTP 689

Query: 460 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519
           +EI   ++   VNE+   L+EGI+   ++ D  +V G+ FP   GG   ++D  GA  + 
Sbjct: 690 EEIQYRLITRFVNEAVMCLQEGILASPAEGDIGAVFGLGFPPCLGGPFRFSDLYGAQKLV 749

Query: 520 TSLKKWSQLYGNFFKPSRFLEERAT 544
             +K++  +YG  F P + L + A 
Sbjct: 750 DRMKRYEAIYGKQFSPCQLLIDHAN 774


>gi|417791290|ref|ZP_12438760.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter sakazakii E899]
 gi|449307426|ref|YP_007439782.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter sakazakii SP291]
 gi|333954628|gb|EGL72460.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter sakazakii E899]
 gi|449097459|gb|AGE85493.1| multifunctional fatty acid oxidation complex subunit alpha
           [Cronobacter sakazakii SP291]
          Length = 717

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 277/554 (50%), Gaps = 26/554 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K +   +  K GL+D VV    LL+     A ++A + +P  R L   ++L  G 
Sbjct: 167 MILAGKQLRPRQALKAGLVDDVVPQSILLEA----AAELAKKHRPAPRRLPVRERLLAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           +  A     + +   +KT  N P  Q  +DV+  G+  G  SG   EA+ F EL M   S
Sbjct: 223 IGRALLFRMVTQKTHQKTHGNYPAAQRIIDVVRTGLEQGSTSGYQAEARAFGELAMTPES 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
             L  +FFA   T+++   T     PR +  V ++GGGLMG GIA        + V +K+
Sbjct: 283 AALRGLFFA---TTELKKETGSEAAPRALHSVGILGGGLMGGGIAYVTATKARLPVRIKD 339

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           ++ + +   +K     +   V R  L   + +  + ++    DY  F   D+V+EAV E 
Sbjct: 340 ISEKGINHALKYSWDLLEKKVRRRHLRASERDAQMALISASTDYRGFHQRDIVVEAVFED 399

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ + +E+E    PH I A+NTS++ +  +    +  +++IG H+FSP   MPL+E+
Sbjct: 400 LTLKQNMVAEIEAHTAPHTIFASNTSSLPIGDIAAGATRPEQVIGLHYFSPVDKMPLVEV 459

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TSA+ I   + + K   K P+VV +C GF VNR   PY   A   +  G  + +I
Sbjct: 460 IPHAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYINEAMRCLMEGESIEKI 519

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
           D A+   G P+GP QLLD  G  V        ++A+  R F +P   V  +L   R G+ 
Sbjct: 520 DEALVKRGFPVGPIQLLDEVGIDVGTKIMPVLERAYGPR-FSAPGDAVAAILNDDRKGRK 578

Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           NG+G Y Y    + SK + DP+V  +I        + PGGK   ++ +EI E  +  ++N
Sbjct: 579 NGRGFYLYPAKGRKSKKQVDPAVYGLI-------GVKPGGK---LSGEEIAERCVMMMLN 628

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+ R L+EG+V  A D D  +V G+ FP + GG   + D +GA  V  +L + +  YG+ 
Sbjct: 629 EAARCLDEGVVRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAAAVVATLTRLATRYGDR 688

Query: 533 FKPSRFLEERATKG 546
           F P   L   A  G
Sbjct: 689 FTPCDRLLRMAQTG 702


>gi|419835906|ref|ZP_14359350.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-46B1]
 gi|421342316|ref|ZP_15792722.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-43B1]
 gi|423734267|ref|ZP_17707481.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-41B1]
 gi|424008552|ref|ZP_17751501.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-44C1]
 gi|395945067|gb|EJH55737.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-43B1]
 gi|408631387|gb|EKL03938.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-41B1]
 gi|408858660|gb|EKL98334.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-46B1]
 gi|408865567|gb|EKM04967.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           HC-44C1]
          Length = 708

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 228 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 343 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 403 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 463 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 523 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 582 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 631

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 632 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 691

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 692 PCDGLLTRAGLG 703


>gi|422922303|ref|ZP_16955492.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           BJG-01]
 gi|341646450|gb|EGS70563.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae
           BJG-01]
          Length = 708

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 168 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 227

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 228 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 288 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 342

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 343 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 402

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 403 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 462

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P++V +C GF VNR   PY   A  ++  G  + 
Sbjct: 463 EVIPHATTSDETIATVVTLARKQGKTPIIVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 522

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 523 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 581

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 582 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 631

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 632 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 691

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 692 PCDGLLTRAGLG 703


>gi|410639327|ref|ZP_11349876.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
 gi|410141115|dbj|GAC08063.1| 3-hydroxyacyl-CoA dehydrogenase [Glaciecola chathamensis S18K6]
          Length = 716

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 183/551 (33%), Positives = 279/551 (50%), Gaps = 25/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           MML   ++ +++  K G++D +V    LL V    A+++A + KP  R   + D +G   
Sbjct: 175 MMLTGSAVRAKQAKKYGIVDDMVPRSILLDV----AIEMAKKSKPK-RKPVKLDLMGQFL 229

Query: 61  E-----AREVLKLARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVM 114
           E      + + K AR Q + KT  N P  +  +D IE G+  G   G   EA+ F  LVM
Sbjct: 230 ERTPMGKKLMFKQARKQTQAKTLGNYPSPERIIDCIETGLEKGNAQGYALEAQHFGHLVM 289

Query: 115 LDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYV 173
              S  L  +FFA     K   V   G+ P  ++K+ V+GGGLMG GIA        + V
Sbjct: 290 TPESAALRSLFFATTEMKKENGVE--GVAPNALKKIGVLGGGLMGGGIAFVTATKAKLPV 347

Query: 174 VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 233
            +K++ S+ +   +K     +   V R  +   +  + L  L G +DY  F + D+VIEA
Sbjct: 348 RIKDIRSDGIAHAMKYSYDILSKKVKRRFMLHSQMQSQLSRLTGSVDYVGFDNTDVVIEA 407

Query: 234 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP 293
           V E + LKQ + +++E  C  H I A+NTS+I +  +       + +IG H+FSP   MP
Sbjct: 408 VFEDLALKQNMVTDVETHCSEHTIFASNTSSIPIGQIAANAKRPENVIGLHYFSPVDKMP 467

Query: 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY-SQSARLLVSLGV 352
           L E++  E TS Q I   + + K   K P+VV +  GF VNR   PY ++SA +L++ G 
Sbjct: 468 LAEVIAHEGTSDQTISTTVELAKKQGKTPIVVKDGAGFYVNRILAPYMNESAEILLA-GE 526

Query: 353 DVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRN 412
            + +ID A+  FG P+GP +LLD  G  V    S      F +R   +P  D LL   R 
Sbjct: 527 PIEQIDRALVKFGFPVGPIKLLDEVGIDVGTKISPILVAEFGERFSSAPGFDKLLADDRK 586

Query: 413 GKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
           GK N +G Y YE G KP  +     + E    L +I P  +   ++E  I E  +  ++N
Sbjct: 587 GKKNKRGFYNYE-GKKPGKE-----VDESVYDLLSITPSSR---LSESTIAERCVLLMLN 637

Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
           E+   L+EG+V  A D D  ++ G+ FP + GG   + D++G   V   L  + Q +G+ 
Sbjct: 638 EAAMCLDEGVVRSARDGDIGAIFGIGFPPFLGGPFRYMDSLGIQQVVERLSHYQQQFGDK 697

Query: 533 FKPSRFLEERA 543
           F P++ L E A
Sbjct: 698 FTPAKCLVEMA 708


>gi|409441106|ref|ZP_11268101.1| Enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Rhizobium mesoamericanum STM3625]
 gi|408747401|emb|CCM79298.1| Enoyl-CoA hydratase/isomerase/3-hydroxyacyl-CoA dehydrogenase
           [Rhizobium mesoamericanum STM3625]
          Length = 685

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/423 (35%), Positives = 230/423 (54%), Gaps = 15/423 (3%)

Query: 105 EAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIAT 164
           E + F EL     +  L HVFFA+RA  + P +   G++PR +R  AVIGGG MG+GIA 
Sbjct: 248 ERQTFLELRGSPQAAALRHVFFAERAALRPPELA--GVEPRSIRSAAVIGGGTMGAGIAA 305

Query: 165 AHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224
                 + V L E +   + +G+  + +     V RGK++ + A   L  + G  DYS  
Sbjct: 306 TLREAGLPVTLVERDEPAVDRGLSNLRSIFESAVKRGKISPETAAERLSGIVGTTDYSLL 365

Query: 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH 284
             +D+VIEAV E V +K+++F +L   C P  +LATNTS +D   +       +R IG H
Sbjct: 366 ARIDVVIEAVFEDVDVKREVFGKLSAVCRPDAVLATNTSYLDPQQIAAHIKCPERFIGLH 425

Query: 285 FFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF-FPYSQS 343
           FFSPAHVM LLEIV T +T+   +     + +++ K+PV  G C GF  NR      +Q+
Sbjct: 426 FFSPAHVMKLLEIVPTAKTAPATLATGFALARMLSKIPVRAGICDGFIGNRILKVTRAQA 485

Query: 344 ARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV 403
            RLL++ G     +D A+RSFGLP+GPF+  DL G  +AA   K   +A  +  F +P+ 
Sbjct: 486 ERLLLA-GATPQAVDQAMRSFGLPMGPFEAQDLGGLDIAAFQRKAA-RARGETPF-APIA 542

Query: 404 DLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIE-ECRRLSNIMPGGKPISVTEKE 461
           + L    R G+ +G G + Y KG + PK    V  II  E R            +  +  
Sbjct: 543 ERLCALERFGQKSGGGWFDYAKGDRTPKQSEVVADIIAGEARETPQ-------RAWDQAG 595

Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
           I++ ++ P+VNE+ ++L E + +RA D+D   + G  FP +RGG++ +A+  G   +  S
Sbjct: 596 IIDCVVLPMVNEASKILNEKVALRAEDIDLVEIHGYGFPRWRGGLMHYAEGRGIADIVAS 655

Query: 522 LKK 524
           L++
Sbjct: 656 LEE 658


>gi|307196024|gb|EFN77749.1| Trifunctional enzyme subunit alpha, mitochondrial [Harpegnathos
           saltator]
          Length = 740

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 175/567 (30%), Positives = 278/567 (49%), Gaps = 36/567 (6%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVT-----------------SEELLKVSR-LWALDIAAR 42
           MML  + I ++   KLGL+D +V                   E  +K ++ L +  + A 
Sbjct: 176 MMLTGRMIKADRAKKLGLVDMIVNRLGPGISTPEQNTLRYLEENAVKAAKDLASGKLKAE 235

Query: 43  RKPWIRSLHRTDKLGSLSEAR-EVLKLARLQAKKTAPNM-PQHQACLDVIEEGIVHGGYS 100
           R P       T ++ SL+  + ++ K A+ Q  K    + P     L+VI  G+  G  +
Sbjct: 236 RDPKTIIGKITQQVLSLNFVKDQIFKRAKAQVMKVTGGLYPAPLKILEVIRVGLDKGPIA 295

Query: 101 GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGS 160
           G   EAK F EL +   S+GL+ +FF Q A  K       G      +KVAV+G GLMG+
Sbjct: 296 GFEAEAKGFSELTVTPESKGLISLFFGQTACKK----NRFGSATNAPKKVAVVGAGLMGA 351

Query: 161 GIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220
           GI    I     VV+K+ N   L +GI  I+  +   V R +++  + +  L  L   L 
Sbjct: 352 GIVQVSIDKGYSVVMKDTNENGLYRGINQIQQGLNAAVKRKRISIVEKDKYLSQLDTTLS 411

Query: 221 YSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 280
           Y  FK+ D+VIEAV E + +K K+  E+E   P HC++ATNTS I +  +   +S  D++
Sbjct: 412 YDSFKNADVVIEAVFEDINIKHKVLKEIESVVPNHCVIATNTSAIPITKIAAGSSRPDKV 471

Query: 281 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340
           IG H+FSP   M LLEI+  + TS +     + VG    K  + VG+  GF   R     
Sbjct: 472 IGMHYFSPVDKMQLLEIITHKGTSEETTKVAVDVGLKQGKTVITVGDGPGFYTTRILSTM 531

Query: 341 SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS 400
              A  L+  GVD   +D   + FG P+G   L D  G  V A  S +  KAF +R  + 
Sbjct: 532 LSEAIRLLQEGVDPMDLDQLTKKFGFPVGAATLSDEVGIDVGAHISIDLAKAFGER-LRG 590

Query: 401 PLVDLL---LKSGRNGKANGKGLYTYEKGSKPKP-DPSVLPIIEECRRLSNIMPGGKPIS 456
             +++L   +K+G  G+ +GKG++ YE GSK +  +   + I ++ +    + P G   S
Sbjct: 591 GDINILSDMVKAGFLGRKSGKGIFVYETGSKHRNVNIGAMDIFKKYK----LEPKG---S 643

Query: 457 VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516
            + ++    ++   VNE+   LEE I+    + +  +V G+ FP + GG   W D  GA+
Sbjct: 644 TSNEDRQLRMVSRFVNEAVLCLEENILANPLEGNVGAVFGLGFPPFTGGPFHWVDRYGAH 703

Query: 517 YVYTSLKKWSQLYGNFFKPSRFLEERA 543
            +   ++++   YG+ F+P + L + A
Sbjct: 704 RLVKKMEEFRSHYGDTFRPCQTLLDMA 730


>gi|145666459|gb|ABP88736.1| FadB [Pseudomonas putida]
          Length = 715

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 169/558 (30%), Positives = 275/558 (49%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+G +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
             L+ +F   +   +     D       V++ AV+G G+MG GIA    +    +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +     +G+LT  K   AL  ++  L Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEAIQLGLNEASKLLGNRAEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +KQ + +E++       ILA+NTS I +N++ +     +  +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVKGQVKDDAILASNTSNISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E++S   +   +   K + K P+VV +C GF VNR  FPY      LVS GVD  RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR    +   VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   + KP    D +VL    P++ E R             VT+++I+  ++ 
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPVVFEQR------------DVTDEDIINWMMV 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   V G+ FP +RGG + + D++G         +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710


>gi|417238042|ref|ZP_12035773.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           9.0111]
 gi|386213820|gb|EII24245.1| fatty oxidation complex, alpha subunit FadJ [Escherichia coli
           9.0111]
          Length = 714

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 172/555 (30%), Positives = 276/555 (49%), Gaps = 28/555 (5%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
           M+L  K + +++  KLGL+D VV    LL+     A+++A + +   R L   +++  G 
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRSSSRPLPVRERILAGP 222

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           L  A     + +    KT  N P  +  L+V+E G+  G  SG   EA+ F EL M   S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + L  +FFA     K P  +D    P     +   G    G    TA     + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
           N + +   +K     + G V R  L   + +  L ++ G  DY  F   D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            LKQ++ +E+E+ C  H I A+NTS++ +  +    +  +++IG HFFSP   MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
               TSAQ I   + + K   K P+VV +  GF VNR   PY   A  +++ G  V  ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
           +A+  FG P+GP QLLD  G           + A+ +R F +P  +V  +L   R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579

Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
           G+G Y Y +KG  SK + DP++ P+I  +   RLS              ++ E  +  ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627

Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
           NE+ R ++E ++    D D  +V G+ FP + GG   + D++GA  V   +++ +  Y +
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYDS 687

Query: 532 FFKPSRFLEERATKG 546
            F P   L E   +G
Sbjct: 688 RFTPCERLVEMGARG 702


>gi|378580464|ref|ZP_09829121.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Pantoea
           stewartii subsp. stewartii DC283]
 gi|377816788|gb|EHT99886.1| enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Pantoea
           stewartii subsp. stewartii DC283]
          Length = 706

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 180/551 (32%), Positives = 277/551 (50%), Gaps = 24/551 (4%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  KS+ +++  KLG++D  V    LL  +         RR P    L   D+L    
Sbjct: 166 LILTGKSLRAKQAKKLGIVDDAVPQAILLDTAIESVKKGKRRRAP----LPLRDRLLQGP 221

Query: 61  EARE-VLKLARLQA-KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
            AR+ +L L R +  +KT  N P  Q  +DV+  G+     +G   EA+ F EL M   S
Sbjct: 222 IARQALLALVRRETERKTQGNYPAAQRIIDVVRIGLEQSSQAGYAAEARAFGELAMTPES 281

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
             L  +FFA  A  K  N T+   +PR V +V V+GGGLMG GIA    ++  + V +K+
Sbjct: 282 AALRSLFFASTALKK-ENGTEA--QPRPVERVGVLGGGLMGGGIACVSAIHAGLPVRIKD 338

Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
           ++   +   ++T  A +   V R +LT  +    +  + G  DY  F   D+VIEAV E 
Sbjct: 339 ISLNGINHALQTSWALLSKKVQRRQLTPAQRQQQMARISGGTDYQGFTQRDIVIEAVFED 398

Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
           + LKQ++ +E+E  C P  I A+NTS++ +  +  K +  + IIG H+FSP   MPL+E+
Sbjct: 399 LALKQQMVAEVETHCQPQTIFASNTSSLPIADIAAKAARPENIIGLHYFSPVEKMPLVEV 458

Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
           +    TS + +   +T+ +   K P+VV +  GF VNR   PY   A   +  G  V  I
Sbjct: 459 IPHAATSPETLASTVTLARKQGKTPIVVADRPGFYVNRILTPYINEAMRCLLEGEPVEHI 518

Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANG 417
           D A+  FG P+GP QLLD  G  V +  S    +A+ +R    P +  ++  GR G+ N 
Sbjct: 519 DRALVMFGFPVGPVQLLDEVGIDVGSKISPGLQQAYGERFAAPPALAAVINDGRKGRKNH 578

Query: 418 KGLYTY--EKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTE-KEIVEMILFPVVNES 474
           KG Y Y   +  + KPDP+V  +++            KP SV     I E  +  ++NE+
Sbjct: 579 KGFYLYGSSRLQRKKPDPTVYDVLQI-----------KPASVQSGAHIAERCVMMMLNEA 627

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+E ++    D D  +V G+ FP + GG   + D +GA  +   L +  Q YG+ F 
Sbjct: 628 VRCLDEQVIRSPRDGDIGAVFGIGFPPFLGGPFHYIDRLGAGEIVNRLTRLEQQYGDRFA 687

Query: 535 PSRFLEERATK 545
           P   L+  A +
Sbjct: 688 PCERLQRAAQQ 698


>gi|146282093|ref|YP_001172246.1| multifunctional fatty acid oxidation complex subunit alpha
           [Pseudomonas stutzeri A1501]
 gi|166971634|sp|A4VKA3.1|FADB_PSEU5 RecName: Full=Fatty acid oxidation complex subunit alpha; Includes:
           RecName: Full=Enoyl-CoA
           hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxybutyryl-CoA epimerase; Includes:
           RecName: Full=3-hydroxyacyl-CoA dehydrogenase
 gi|145570298|gb|ABP79404.1| fatty-acid oxidation complex alpha-subunit [Pseudomonas stutzeri
           A1501]
          Length = 715

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 169/558 (30%), Positives = 272/558 (48%), Gaps = 36/558 (6%)

Query: 6   KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
           K   +E+  K+  +DAVV  E       +L+K +    LD  A+R+P +  L    KL +
Sbjct: 172 KENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL----KLNA 227

Query: 59  LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
           + +           A +  PN P     +  I++    G    +  EA  F +L     +
Sbjct: 228 IEQMMAFETSKAFVAGQAGPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTSVA 287

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
           + LV +F + +   K     D   + R V+  AV+G G+MG GIA    +    +++K++
Sbjct: 288 QSLVGLFLSDQELKKKAKAYD--KQARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345

Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
             E +  G+      +   V +G+LT +K   AL  ++  + Y +F +VD+V+EAV+E+ 
Sbjct: 346 REEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVENP 405

Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
            +K  + +E+E       I+A+NTSTI ++ + +     +   G HFF+P H+MPL+E++
Sbjct: 406 KVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVEVI 465

Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
           R E+TS   I   +   K + K PVVV +C GF VNR  FPY       ++ GVD  R D
Sbjct: 466 RGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVRAD 525

Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQS--PLVDLLLKSGRNGKAN 416
             +  FG P+GP  L+D+ G            + FPDR        VD++  + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQKN 585

Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
           GKG Y YE   K KP    DP       PI+ E R LS+            ++I+  ++ 
Sbjct: 586 GKGFYAYEMDKKGKPKKVVDPQAYELLKPIVAETRELSD------------EDIINYMMI 633

Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
           P+  E+ R LE+GIV  A++ D   + G+ FP +RGG + + D++G         K++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVAMADKYADL 693

Query: 529 YGNFFKPSRFLEERATKG 546
            G  + P+  L E A  G
Sbjct: 694 -GPLYHPTAKLREMAANG 710


>gi|153824924|ref|ZP_01977591.1| fatty oxidation complex, alpha subunit [Vibrio cholerae MZO-2]
 gi|227081220|ref|YP_002809771.1| multifunctional fatty acid oxidation complex subunit alpha [Vibrio
           cholerae M66-2]
 gi|227117413|ref|YP_002819309.1| fatty oxidation complex, alpha subunit [Vibrio cholerae O395]
 gi|229505358|ref|ZP_04394868.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae BX 330286]
 gi|229515429|ref|ZP_04404888.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae TMA 21]
 gi|229529862|ref|ZP_04419252.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae 12129(1)]
 gi|297578651|ref|ZP_06940579.1| fatty oxidation complex, alpha subunit [Vibrio cholerae RC385]
 gi|298498844|ref|ZP_07008651.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae MAK
           757]
 gi|149741436|gb|EDM55466.1| fatty oxidation complex, alpha subunit [Vibrio cholerae MZO-2]
 gi|227009108|gb|ACP05320.1| fatty oxidation complex, alpha subunit [Vibrio cholerae M66-2]
 gi|227012863|gb|ACP09073.1| fatty oxidation complex, alpha subunit [Vibrio cholerae O395]
 gi|229333636|gb|EEN99122.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae 12129(1)]
 gi|229347198|gb|EEO12158.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae TMA 21]
 gi|229357581|gb|EEO22498.1| enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA
           isomerase/3-hydroxyacyl-CoA
           dehydrogenase/3-hydroxybutyryl-CoA epimerase [Vibrio
           cholerae BX 330286]
 gi|297536245|gb|EFH75078.1| fatty oxidation complex, alpha subunit [Vibrio cholerae RC385]
 gi|297543177|gb|EFH79227.1| fatty oxidation complex, alpha subunit FadJ [Vibrio cholerae MAK
           757]
          Length = 724

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 274/552 (49%), Gaps = 22/552 (3%)

Query: 1   MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
           ++L  K + +++  KLG++DA V    LL V++    +   +++  +    +   L +  
Sbjct: 184 LILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEEKGHKKRAQVTLPIKEKLLANTG 243

Query: 61  EAREVL--KLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
             R+++  + A+   +KT  N P  QA L+VI+ G+  G ++G+  EAK F ELVM   S
Sbjct: 244 LGRKLIFDQAAKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTRES 303

Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHIL---NNIYVVL 175
           + L  +FFA     K     D+G   +     AV   G    G   +H+        V +
Sbjct: 304 KALRSIFFATTEMKK-----DLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRI 358

Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
           K+V ++ +L  +            R  LT+ +    +  L G   +  F   D+VIEAV 
Sbjct: 359 KDVANDGVLNALNYNYKLFDKQRQRKILTKAQLQAQMSQLSGGTGFVGFDRCDVVIEAVF 418

Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
           E + LKQ++ +++E    P  I ATNTS++ ++ +  +      I+G H+FSP   MPL+
Sbjct: 419 EDLKLKQQMVADIEANAKPTTIFATNTSSLPIHQIASQAQRPQNIVGLHYFSPVEKMPLV 478

Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
           E++    TS + I  ++T+ +   K P+VV +C GF VNR   PY   A  ++  G  + 
Sbjct: 479 EVIPHATTSDETIATVVTLARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMAGEPIE 538

Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
           ++D+A+  FG P+GP  LLD  G  + A       K    R FQ P V D+LLK  R G+
Sbjct: 539 KLDAALLDFGFPVGPITLLDEVGVDIGAKIMPILVKELGPR-FQGPDVFDVLLKDNRKGR 597

Query: 415 ANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNES 474
            +GKG YTY+   K + D SV        +L  + P  K   + +KEI    L P++NE+
Sbjct: 598 KSGKGFYTYKGSKKKEVDKSVY-------KLLKLTPESK---LNDKEIAMRCLLPMLNEA 647

Query: 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFK 534
            R L+EGI+  A D D  ++ G+ FP + GG   + D +G   V   + + ++ YG  F 
Sbjct: 648 VRCLDEGIIRSARDGDMGAIFGIGFPPFLGGPFRYMDTLGLTKVVEMMNQHTEKYGERFA 707

Query: 535 PSRFLEERATKG 546
           P   L  RA  G
Sbjct: 708 PCDGLLTRAGLG 719


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,508,237,235
Number of Sequences: 23463169
Number of extensions: 362096136
Number of successful extensions: 1023570
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8523
Number of HSP's successfully gapped in prelim test: 899
Number of HSP's that attempted gapping in prelim test: 990349
Number of HSP's gapped (non-prelim): 12179
length of query: 563
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 415
effective length of database: 8,886,646,355
effective search space: 3687958237325
effective search space used: 3687958237325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)