BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008509
(563 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPI6|AIM1_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1
OS=Arabidopsis thaliana GN=AIM1 PE=1 SV=1
Length = 721
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/563 (73%), Positives = 490/563 (87%), Gaps = 4/563 (0%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
M+LLSKSI+SEEG KLGLIDA+V ++L SR WALDIA RKP+++SLHRTDK+GSLS
Sbjct: 163 MILLSKSISSEEGHKLGLIDALVPPGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLS 222
Query: 61 EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
EAR +LK +R AKK APNMPQH AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++G
Sbjct: 223 EARAILKNSRQLAKKIAPNMPQHHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKG 282
Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
LVHVFFAQRATSKVPNVTD+GLKPR ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NS
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINS 342
Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
E+L+KGIK++EAN++ LV+RGKLTQDKA AL + KGVLDY+EF DVDMVIEAVIE++ L
Sbjct: 343 EFLMKGIKSVEANMKSLVSRGKLTQDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQL 402
Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
KQ IF E+EK C PHCILA+NTSTIDL+++GEKT+S+DRI+GAHFFSPAH+MPLLEIVR+
Sbjct: 403 KQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRS 462
Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
+ TSAQVILDLM VGK IKKVPVVVGNC GFAVNR FFPYSQ+A +L +LGVD+FRIDS
Sbjct: 463 KNTSAQVILDLMAVGKAIKKVPVVVGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSV 522
Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
I SFGLP+GPFQL DLAG+G+ A + K + DR F+SP+ +LLLKSGRNGK NG+G
Sbjct: 523 ITSFGLPLGPFQLGDLAGHGIGLAVGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGRGY 582
Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
Y YEKGSKPKPDPSVL I+E+ R+L+NIMPGGKPISVT+KEIVEMILFPVVNE+CRVL+E
Sbjct: 583 YIYEKGSKPKPDPSVLSIVEKSRKLTNIMPGGKPISVTDKEIVEMILFPVVNEACRVLDE 642
Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
G+V+RASDLD ASVLGMSFPSYRGGIVFWAD VG Y+Y LKK S+ YG+FFKPSR+LE
Sbjct: 643 GVVIRASDLDIASVLGMSFPSYRGGIVFWADTVGPKYIYERLKKLSETYGSFFKPSRYLE 702
Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
ERA G+ L S S +SR++L
Sbjct: 703 ERAMNGMLL----SESKSSRSKL 721
>sp|Q8W1L6|MFP_ORYSJ Peroxisomal fatty acid beta-oxidation multifunctional protein
OS=Oryza sativa subsp. japonica GN=MFP PE=1 SV=2
Length = 726
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/564 (68%), Positives = 475/564 (84%), Gaps = 1/564 (0%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
MML SK IT++EG + GL+DA+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLS
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222
Query: 61 EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
EAR VL AR QAKK A N+PQHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282
Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
LVH FFAQR T+KVP VTD+ LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342
Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
++L +G K I AN+ GLV RG LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PL
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402
Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
KQ IFS+LEK CPPHCILATNTSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462
Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
E+TS Q ILDL+TVGK+IKKVPVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522
Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
I SFG+P+GPFQL DLAGYGVA A + AF R+ S LVDL++++GR GK+NGKG
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 582
Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
Y YEKG KPKPDPSV +I+E RR + MPGGKP+++++++I+EMI FPVVNE+CRV++E
Sbjct: 583 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 642
Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
+V+RASDLD AS+LGM FP +RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE
Sbjct: 643 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLE 702
Query: 541 ERATKGIPLSAP-VSSSSTSRARL 563
+RA + +PLSAP + ++SR+R+
Sbjct: 703 DRAKRSLPLSAPNATQQASSRSRM 726
>sp|Q39659|MFPA_CUCSA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Cucumis sativus PE=1 SV=1
Length = 725
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/552 (59%), Positives = 425/552 (76%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
MML SK I +E LGL+DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225
Query: 61 EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
EAR++ LAR QAKK PN+ AC+D +E G+V G +G+ KEA+ F+ L+ DT +
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285
Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
L+H+FFAQR+T+KVP VTD+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 345
Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
++L GI + AN++ V +G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V L
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405
Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
KQ+IFS+LEK CPPHC+LATNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465
Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
+ T+AQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID A
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525
Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
I FG+P+GPF+L DL G+GVAAAT+ +F +AFP+R+++S L+ L+ + G++ KG
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 585
Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
Y Y+K K P+P + IE+ R S + K + EK+IVEMI FPVVNE+CRVL E
Sbjct: 586 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 645
Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
GI V+A+DLD A V+GM FPSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP +L
Sbjct: 646 GIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLA 705
Query: 541 ERATKGIPLSAP 552
ERA +G LSAP
Sbjct: 706 ERAVQGATLSAP 717
>sp|O49809|MFPA_BRANA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Brassica napus PE=2 SV=2
Length = 725
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/563 (58%), Positives = 424/563 (75%), Gaps = 3/563 (0%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
M+L SK + +EEG LGLIDAVV ELL +R WALDIA RRKPW+ S+ +TDKL L
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLG 225
Query: 61 EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
EARE+LK A+ Q ++ APNM CL+ +E GIV G +G+ KEA+V E++ LDT++G
Sbjct: 226 EAREILKFAKDQTRRQAPNMKHPLMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKG 285
Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
L+HVFF+QR T+KVP VTD GL PR + KVA+IGGGLMGSGIATA IL+N V+LKEVN
Sbjct: 286 LIHVFFSQRGTTKVPGVTDRGLVPRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNE 345
Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
++L GI ++AN++ V +GK++++K + +LKG LDY F+DVDMVIEAVIE++ L
Sbjct: 346 KFLEAGIGRVKANLQSRVKKGKMSKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405
Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
KQ+IF++LEK CP HCILA+NTSTIDLN +GE+T SQDRIIGAHFFSPAHVMPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRT 465
Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
TSAQVI+DL+ VGK I+K PVVVGNCTGFAVNR FFPY+Q+A LV G D + ID A
Sbjct: 466 NHTSAQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKA 525
Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
+ FG+P+GPF+L DL G+GVA AT+ +F + FP+R+++S ++ L+ + R G+A KG
Sbjct: 526 VSKFGMPMGPFRLCDLVGFGVAIATATQFIENFPERTYKSMIIPLMQEDKRAGEATRKGF 585
Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
Y Y+ K KPDP + I++ R +S P K ++EKEI+EM FPVVNE+CRV E
Sbjct: 586 YLYDDRRKAKPDPEIKNYIDKARSVSGAKPDPKLEKLSEKEIIEMTFFPVVNEACRVFAE 645
Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
GI V+A+DLD A + GM FP YRGGI+FWAD++G+ Y+Y+ L++WS+ YG FFKP FL
Sbjct: 646 GIAVKAADLDIAGIFGMGFPPYRGGIMFWADSIGSKYIYSKLEEWSKAYGEFFKPCAFLA 705
Query: 541 ERATKGIPLSAPVSSSSTSRARL 563
ER +KG PLSAP+ SR+RL
Sbjct: 706 ERGSKGAPLSAPLEQ---SRSRL 725
>sp|Q9ZPI5|MFP2_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2
OS=Arabidopsis thaliana GN=MFP2 PE=1 SV=1
Length = 725
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/558 (57%), Positives = 419/558 (75%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
M+L SK + +EEG LGLIDAVV EL+ +R WALDI RRKPW+ S+ +TDKL L
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLG 225
Query: 61 EAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRG 120
EARE+L A+ Q K APNM CLD IE GIV G +G+ KEA+V ++V LDT++G
Sbjct: 226 EAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKG 285
Query: 121 LVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180
L+HVFF+QR T+KVP VTD GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN
Sbjct: 286 LIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345
Query: 181 EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPL 240
++L GI ++AN++ V +G ++Q+K + +LKG LDY F+DVDMVIEAVIE++ L
Sbjct: 346 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405
Query: 241 KQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRT 300
KQ+IF++LEK CP HCILA+NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRT 465
Query: 301 ERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSA 360
TSAQVI+DL+ VGK IKK PVVVGNCTGFAVNR FFPY+Q+A LV G D + ID A
Sbjct: 466 NHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRA 525
Query: 361 IRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGL 420
I FG+P+GPF+L DL G+GVA AT+ +F + F +R+++S ++ L+ + R G+A KG
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGF 585
Query: 421 YTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEE 480
Y Y+ K KPDP + IE+ R +S + K +++EK+I+EM FPVVNE+CRV E
Sbjct: 586 YLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAE 645
Query: 481 GIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLE 540
GI V+A+DLD A ++GM FP YRGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP FL
Sbjct: 646 GIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLA 705
Query: 541 ERATKGIPLSAPVSSSST 558
ER +KG+ LSAPV +S+
Sbjct: 706 ERGSKGVLLSAPVKQASS 723
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 30/556 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKE 177
+ L +FFA K P P + V ++GGGLMG+GIA + V +K+
Sbjct: 283 QALRSIFFASTDVKKDPGSD---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKD 339
Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
+N + + +K + G V R L + + L ++ G DY F D++IEAV E+
Sbjct: 340 INPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEN 399
Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
+ LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI
Sbjct: 400 LELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEI 459
Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
+ TSAQ I + + K K P+VV + GF VNR PY A +++ G V I
Sbjct: 460 IPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519
Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
D+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+
Sbjct: 520 DAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRK 578
Query: 416 NGKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
NG+G Y Y +KG SK + DP++ P+I + RLS ++ E + +
Sbjct: 579 NGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLM 626
Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
+NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG
Sbjct: 627 LNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYG 686
Query: 531 NFFKPSRFLEERATKG 546
+ F P L E +G
Sbjct: 687 SRFTPCERLVEMGARG 702
>sp|A4WCW6|FADJ_ENT38 Fatty acid oxidation complex subunit alpha OS=Enterobacter sp.
(strain 638) GN=fadJ PE=3 SV=1
Length = 715
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 281/550 (51%), Gaps = 24/550 (4%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + + K+GL+D VV LL A+++A + + R L +++ G
Sbjct: 167 MILTGKQLRPRQALKVGLVDEVVPHSILLTA----AVELAQKERQASRHLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A ++ + +KT N P + LDVIE G+ G SG EAK F EL M S
Sbjct: 223 LGRALLFNRVGKKTEQKTKGNYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +++ P V G G TA + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SEVAPGPLNAIGVLGGGLMGGGISFVTAS-KGKLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N++ + ++ + V R + + + AL ++ G +D+S FK D+VIEAV E +
Sbjct: 341 NAKGINHALQYSWQLLDQKVKRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFEDL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +++E+ C PH I A+NTS++ + + + +++IG HFFSP MPL+E++
Sbjct: 401 QLKQQMVADVEQYCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVI 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
E TSAQ + ++ + K K P+VV + GF VNR PY A L++ G V +D
Sbjct: 461 PHESTSAQTVATVVKLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENVD 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
A+ FG P+GP QLLD G + A+ +R F P +V +L R G+ N
Sbjct: 521 DALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSPPANVVSAILNDDRKGRKN 579
Query: 417 GKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
G+G Y Y + SK + DPSV +I N GK +T ++ E + ++NE
Sbjct: 580 GRGFYLYAAKGRKSKKQVDPSVYGLI-------NASGQGK---LTAQQCAERCVMMMLNE 629
Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
+ R +E ++ A D D +V G+ FP + GG + D++GA V +L++ + LYG+ F
Sbjct: 630 AARCFDEKVIKNARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLASLYGSRF 689
Query: 534 KPSRFLEERA 543
P L++ A
Sbjct: 690 TPCETLKQMA 699
>sp|Q48GW3|FADB_PSE14 Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
pv. phaseolicola (strain 1448A / Race 6) GN=fadB PE=3
SV=1
Length = 721
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 290/567 (51%), Gaps = 36/567 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K ++E+ K+G +DAVV E +L++ + D A+R+P + L KL +
Sbjct: 172 KESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F ++ +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTSAA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L+ +F + K D K V++ AV+G G+MG GIA + +++K++
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDAVAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E H ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + + + + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + +VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE K KP DP+VL PI+ E R V++++I+ ++
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMMI 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693
Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
G ++P+ L E A+KG SS
Sbjct: 694 -GALYQPTAKLREMASKGQSFFGQASS 719
>sp|Q87ZB2|FADB_PSESM Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
pv. tomato (strain DC3000) GN=fadB PE=3 SV=1
Length = 721
Score = 265 bits (676), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 172/568 (30%), Positives = 290/568 (51%), Gaps = 38/568 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K ++E+ K+G++DA+V E +L++ + D A+R+P + L KL +
Sbjct: 172 KENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ + G + EA F ++ +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAAIFGRDKALEIEAAGFVKMAKTSAA 287
Query: 119 RGLVHVFFA-QRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKE 177
+ L+ +F Q K ++ R V++ AV+G G+MG GIA + +++K+
Sbjct: 288 QSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKD 344
Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
+ E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 345 IREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVEN 404
Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
+KQ + +E+E + ILA+NTSTI ++++ + + +G HFF+P H+MPL+E+
Sbjct: 405 PKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEV 464
Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
+R E++S + + + K + K P+VV +C GF VNR FPY LVS GVD RI
Sbjct: 465 IRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRI 524
Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKA 415
D + FG P+GP L+D+ G + FPDR + VD L ++ R G+
Sbjct: 525 DKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQK 584
Query: 416 NGKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMIL 467
NGKG Y YE K KP DP+VL PI+ E R V++++I+ ++
Sbjct: 585 NGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIINWMM 632
Query: 468 FPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQ 527
P+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++
Sbjct: 633 IPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAE 692
Query: 528 LYGNFFKPSRFLEERATKGIPLSAPVSS 555
L G ++P+ L E A G SS
Sbjct: 693 L-GALYQPTAKLREMAANGQSFFGQASS 719
>sp|Q6NYL3|ECHP_DANRE Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1
Length = 718
Score = 262 bits (669), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 185/569 (32%), Positives = 290/569 (50%), Gaps = 37/569 (6%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
++ + ++++E KLG++D V T + +V+ +AL KP S R L +
Sbjct: 150 LITTGRHVSAQEALKLGMVDQV-TEQNTCEVALEFALKAVG--KPL--SSRRLSMLTTPC 204
Query: 61 EA--REVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDT 117
+ + A +Q +K A + AC+ + + YS G+ +E ++ L
Sbjct: 205 PPGLDGIFEAATMQVQKKARGVMAPLACVQAVRAATLP--YSEGIKREGELMATLFSSGQ 262
Query: 118 SRGLVHVFFAQRATSK--VPNVTDIG-LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVV 174
++ L + FFAQR K +P+ KPR ++ AVIG G MG GI + L + +
Sbjct: 263 AQALQYSFFAQRTAEKWTLPSGAQWNNSKPREIQSAAVIGLGTMGRGIVVS--LARVGIS 320
Query: 175 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 234
+ V SE L ++T V G++ R + + +L +LK L + KDVD+VIEAV
Sbjct: 321 VIAVESEKKL--LETGRQMVIGMLER-DAKRRGVSASLNLLKFSLSLQDLKDVDLVIEAV 377
Query: 235 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 294
E + LK++IF EL + C P +L +NTS +D++ + + T + G HFFSPAHVM L
Sbjct: 378 FEDMALKKQIFRELSRVCRPATLLCSNTSGLDVDALADVTDRPQLVAGMHFFSPAHVMKL 437
Query: 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDV 354
LE+V R+S + I M++GK + KV V VGNC GF NR PY + A L+ G
Sbjct: 438 LEVVCGPRSSKEAIATAMSLGKRMGKVSVAVGNCPGFVGNRMLMPYLEQATFLLEEGATP 497
Query: 355 FRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKE-------FDKAFPDRSFQ----SPLV 403
+ID A+ FG +G F++ DLAG V KE D P R Q P+
Sbjct: 498 QQIDKALEDFGFAMGVFRMSDLAGLDVGWRVRKESGLTGPDVDPKDPPRRRQGRKYCPIP 557
Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
D++ + GR G+ G+G Y Y+K + KPDP + ++E R I +P +T++E
Sbjct: 558 DMVCQQGRFGQKTGRGWYMYDKPGDTNAKPDPLIQNLLETYRSRYGI----QPRKITDQE 613
Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
I+E LF + NE R+L++ I + D+D + G FP +RGG +F+A VG V
Sbjct: 614 IIERCLFALANEGFRILKDKIAGQPEDIDVIYLFGYGFPRHRGGPMFYASMVGLERVLER 673
Query: 522 LKKWSQLYGN--FFKPSRFLEERATKGIP 548
L+ + + +PS L++ +G P
Sbjct: 674 LEYYHHALPDVPHLEPSPLLKKLVARGSP 702
>sp|B5XVW2|FADJ_KLEP3 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
(strain 342) GN=fadJ PE=3 SV=1
Length = 714
Score = 261 bits (668), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 282/556 (50%), Gaps = 29/556 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
MML + + + + K GL+D VV LL+ A+++A + +P R + +++ +
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQA----AVELALKGRPASRDMPVRERVLAGP 222
Query: 61 EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
R +L + + +KT N P + L V+E G+ HG SG +EA+ F EL M S
Sbjct: 223 LGRHLLFHFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK--PRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVL 175
+ L +FFA K D G + P + +AV+GGGLMG GIA + V +
Sbjct: 283 QALRSIFFASTDLKK-----DRGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337
Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
K++ + +K + V + +L + + + M+ G DY F D+VIEAV
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVF 397
Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
E + LKQ++ SE+E+ C P I A+NTS++ + + + R+IG HFFSP MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLV 457
Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
E++ + T Q I ++ + K K P+VV + GF VNR PY A L+ G V
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517
Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNG 413
ID A+ FG P+GP QLLD G + AF +R F SP ++D +LK R G
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSSPANIIDAILKDDRKG 576
Query: 414 KANGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 470
+ N +G Y YE + SK +PDP+V P++ R S + + +++ E + +
Sbjct: 577 RKNNRGFYLYETKGRKSKKRPDPAVYPLLGIDRPQSRL---------SAQQVAERCVMMM 627
Query: 471 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG 530
+NE+ R +E I+ A D D +V G+ FP + GG + D +GA V L++ + YG
Sbjct: 628 LNEAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYG 687
Query: 531 NFFKPSRFLEERATKG 546
F P L A +G
Sbjct: 688 PRFTPCDTLLRMAEQG 703
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 259 bits (663), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 177/555 (31%), Positives = 281/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + +KT N P + LDVIE G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEQKTQGNYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702
>sp|Q4ZRA0|FADB_PSEU2 Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
pv. syringae (strain B728a) GN=fadB PE=3 SV=1
Length = 721
Score = 258 bits (660), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 173/567 (30%), Positives = 285/567 (50%), Gaps = 36/567 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+G +DAVV E +L++ + D A+R+P + L KL +
Sbjct: 172 KENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F ++ +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTPAA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L+ +F + K D K V++ AV+G G+MG GIA + +++K++
Sbjct: 288 QSLIGLFLNDQELKKKARGYDKIAKD--VKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + G + +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E + ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + +D L + R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE K KP DP+VL PI+ E R V++++IV ++
Sbjct: 586 GKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQRE------------VSDEDIVNWMMI 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D + G+ FP +RGG + + D++G ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQYAEL 693
Query: 529 YGNFFKPSRFLEERATKGIPLSAPVSS 555
G ++P+ L E A G SS
Sbjct: 694 -GALYQPTAKLREMAANGQSFFGQASS 719
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 258 bits (659), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A+ + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRAQLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702
>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12) GN=fadJ PE=1 SV=1
Length = 714
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
G+G Y Y +KG SK + DP++ P+I G+ ++ ++ E + ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629
Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689
Query: 534 KPSRFLEERATKG 546
P L E +G
Sbjct: 690 TPCERLVEMGARG 702
>sp|B1X9L4|FADJ_ECODH Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / DH10B) GN=fadJ PE=3 SV=1
Length = 714
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
G+G Y Y +KG SK + DP++ P+I G+ ++ ++ E + ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629
Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689
Query: 534 KPSRFLEERATKG 546
P L E +G
Sbjct: 690 TPCERLVEMGARG 702
>sp|C4ZVN2|FADJ_ECOBW Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=fadJ PE=3 SV=1
Length = 714
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 278/553 (50%), Gaps = 24/553 (4%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA I V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
G+G Y Y +KG SK + DP++ P+I G+ ++ ++ E + ++NE
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLI-------GTQGQGR---ISAPQVAERCVMLMLNE 629
Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+ F
Sbjct: 630 AVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRF 689
Query: 534 KPSRFLEERATKG 546
P L E +G
Sbjct: 690 TPCERLVEMGARG 702
>sp|Q08426|ECHP_HUMAN Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3
Length = 723
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 287/569 (50%), Gaps = 43/569 (7%)
Query: 6 KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
+ I ++E KLG++D VV S EE ++ + R+ + +RR KP I+SL D +
Sbjct: 156 RRILADEALKLGILDKVVNSDPVEEAIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI-- 212
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
SEA L+ ++ P +AC+ ++ + + G+ KE ++F L+ +
Sbjct: 213 FSEAL-------LKMRRQHPGCLAQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQA 265
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
R L + FFA+R +K + K R V V V+G G MG GI + I V+
Sbjct: 266 RALQYAFFAERKANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIA 325
Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
+ + L K I + + ++ + + + L + E VD+VIEAV
Sbjct: 326 VDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVF 383
Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
E + LK+++F+EL C P L TNTS +D++ + T +IG HFFSPAHVM LL
Sbjct: 384 EEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLL 443
Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
E++ ++ +S I +M + K IKK+ VVVGNC GF NR PY A L+ G
Sbjct: 444 EVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPE 503
Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFP------------DRSFQSPLV 403
+D + FG +GPF++ DLAG V + K P +R + P+
Sbjct: 504 EVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIP 562
Query: 404 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKE 461
D+L + GR G+ GKG Y Y+K G KPDP + + R+ +I +P ++++ E
Sbjct: 563 DVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTHHI----EPRTISQDE 618
Query: 462 IVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTS 521
I+E L+ ++NE+ R+L EGI +D + G +P ++GG +F+A VG V
Sbjct: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
Query: 522 LKKWSQLYGNF--FKPSRFLEERATKGIP 548
L+K+ + + +PS +L++ A++G P
Sbjct: 679 LQKYYRQNPDIPQLEPSDYLKKLASQGNP 707
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGTQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+V A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|Q32DJ4|FADJ_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1
Length = 714
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F ELVM S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVIAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA I V +K++
Sbjct: 283 QALRSIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 256 bits (655), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+V A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+V A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|Q31YB7|FADJ_SHIBS Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 4 (strain Sb227) GN=fadJ PE=3 SV=1
Length = 714
Score = 256 bits (654), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+V A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVSERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKGSKPKP--DPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG K K DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGCKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASSEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (652), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
>sp|B7MY16|FADJ_ECO81 Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81
(strain ED1a) GN=fadJ PE=3 SV=1
Length = 714
Score = 255 bits (651), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 279/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPRGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCDRLVEMSERG 702
>sp|Q9AHY3|FADB_PSEPU Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
GN=fadB PE=3 SV=2
Length = 715
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+G +DAVV E +L+K + LD A+R+P + L KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F +L +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
L+ +F + + D V++ AV+G G+MG GIA + +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + V +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGNRVDKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E ILA+NTSTI +N++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE + KP D +VL PI+ E R VT+++I+ ++
Sbjct: 586 GKGFYAYETDKRGKPKKVFDAAVLDVLKPIVFEQR------------EVTDEDIINWMMV 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693
Query: 529 YGNFFKPSRFLEERATKG 546
G + P+ L E A G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710
>sp|A5W6H0|FADB_PSEP1 Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=fadB PE=3 SV=1
Length = 715
Score = 255 bits (651), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+G +DAVV E +L+K + LD A+R+P + L KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F +L +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
L+ +F + + D V++ AV+G G+MG GIA + +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + V +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E ILA+NTSTI +N++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + VD L +S R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYESNRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE + KP D +VL PI+ E R VT+++I+ ++
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693
Query: 529 YGNFFKPSRFLEERATKG 546
G + P+ L E A G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710
>sp|A6TC19|FADJ_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=fadJ PE=3 SV=1
Length = 714
Score = 254 bits (650), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 279/554 (50%), Gaps = 25/554 (4%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 60
MML K + + K GL+D VV LL+ A+++A + +P R + +++ +
Sbjct: 167 MMLTGKQLRPRQALKAGLVDEVVPQAILLQA----AVELALKGRPTSREVPVRERVLAGP 222
Query: 61 EAREVLK--LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
R +L + + +KT N P + L V+E G+ HG SG +EA+ F EL M S
Sbjct: 223 LGRHLLFQFVGKQTQRKTQGNYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIA-TAHILNNIYVVLKE 177
+ L +FFA K P P +R VAV+GGGLMG GIA + V +K+
Sbjct: 283 QALRSIFFASTDLKKDPGAE---AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKD 339
Query: 178 VNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237
+ + +K + V + +L + + + ++ G DY F D+VIEAV E
Sbjct: 340 IQPRGINHALKYSWDLLNKQVRQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFED 399
Query: 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297
+ LKQ++ SE+E+ P I A+NTS++ + + S ++IG HFFSP MPL+E+
Sbjct: 400 LALKQRMVSEVEQYGGPQTIFASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEM 459
Query: 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRI 357
+ + T Q I ++ + K K P+VV + GF VNR PY A L+ G + I
Sbjct: 460 IPHKGTDPQTIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVI 519
Query: 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKA 415
D+A+ FG P+GP QLLD G + AF +R F P ++D +LK R G+
Sbjct: 520 DNALVKFGFPVGPIQLLDEVGIDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRK 578
Query: 416 NGKGLYTYE---KGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVN 472
N +G Y YE + SK +PDP+V P++ R S + + +++ E + ++N
Sbjct: 579 NNRGFYLYETKGRKSKKRPDPAVYPLLGIGRPQSRL---------SAQQVAERCVMMMLN 629
Query: 473 ESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF 532
E+ R +E I+ A D D +V G+ FP + GG + D +GA V L++ + +G
Sbjct: 630 EAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPR 689
Query: 533 FKPSRFLEERATKG 546
F P L A +G
Sbjct: 690 FTPCDTLLRMAEQG 703
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 280/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K + +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTEVKK-DSGSDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702
>sp|Q93Q12|FADB_PSEOL Fatty acid oxidation complex subunit alpha OS=Pseudomonas
oleovorans GN=fadB PE=3 SV=1
Length = 715
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 276/558 (49%), Gaps = 36/558 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+G +DAVV E +L+K + LD A+R+P + L KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F +L +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSVA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
L+ +F + + D ++ AV+G G+MG GIA + +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDAKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + V +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E ILA+NTSTI +N++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVETQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE + KP D SVL PI+ E R VT+++I+ ++
Sbjct: 586 GKGFYAYETDKRGKPKKVADASVLDVLKPIVFEQR------------EVTDEDIINWMMI 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693
Query: 529 YGNFFKPSRFLEERATKG 546
G + P+ L E A G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710
>sp|P07896|ECHP_RAT Peroxisomal bifunctional enzyme OS=Rattus norvegicus GN=Ehhadh PE=1
SV=2
Length = 722
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 283/568 (49%), Gaps = 41/568 (7%)
Query: 6 KSITSEEGWKLGLIDAVVTS---EELLKVS-RLWALDIAARR---KPWIRSLHRTDKLGS 58
K ++++E +LG++DAVV S EE +K + ++ I RR KP + S
Sbjct: 155 KYLSADEALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRIFNKP----------VPS 204
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L V A + +K P + + C+ I+ + H G+ +E K+F L +
Sbjct: 205 LPNMDSVFAEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQA 264
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVL 175
+ L + FFA+++ +K + K + V V V+G G MG GIA + I VV
Sbjct: 265 KALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVA 324
Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
E + + L K I + +R Q+ +A L+ E VD+V+EAV
Sbjct: 325 VESDPKQLDAAKKIITFTLEKEASRAH--QNGQASAKPKLRFSSSTKELSTVDLVVEAVF 382
Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
E + LK+K+F+EL C P L TNTS ++++ + T +IG HFFSPAHVM LL
Sbjct: 383 EDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLL 442
Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
E++ + +S I +M++ K I K+ VVVGNC GF NR PY L+ G
Sbjct: 443 EVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPE 502
Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVD 404
+D + FG +GPF++ DLAG V T P R S SPL D
Sbjct: 503 DVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGD 562
Query: 405 LLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEI 462
+L ++GR G+ GKG Y Y+K G KPDP + + + R + +I + +++++EI
Sbjct: 563 MLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHI----EQRTISKEEI 618
Query: 463 VEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSL 522
+E L+ ++NE+ R+LEEG+ R +D + G +P ++GG +F+A +VG V L
Sbjct: 619 LERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKL 678
Query: 523 KKWSQLYGNF--FKPSRFLEERATKGIP 548
+K+ + + +PS +L +G P
Sbjct: 679 QKYYRQNPDIPQLEPSDYLRRLVAQGSP 706
>sp|B1J5A5|FADB_PSEPW Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain W619) GN=fadB PE=3 SV=1
Length = 715
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 278/558 (49%), Gaps = 36/558 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+G +DAVV E +L+K + LD A+R+P + L KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F +L +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L+ +F + + D V++ AV+G G+MG GIA + +++K++
Sbjct: 288 QSLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + V +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E ILA+NTSTI +N++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE + KP D +VL PI+ E R VT+++I+ ++
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693
Query: 529 YGNFFKPSRFLEERATKG 546
G + P+ L E A G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710
>sp|Q3K9D8|FADB_PSEPF Fatty acid oxidation complex subunit alpha OS=Pseudomonas
fluorescens (strain Pf0-1) GN=fadB PE=3 SV=1
Length = 715
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 276/553 (49%), Gaps = 36/553 (6%)
Query: 11 EEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAR 63
E+ K+G +DAVV E EL+K + D A+R+P + L +L ++ +
Sbjct: 177 EDALKVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKL----RLNAIEQMM 232
Query: 64 EVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123
A + PN P + I++ G + EA F +L ++ L+
Sbjct: 233 AFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292
Query: 124 VFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYL 183
+F + K D K V++ AV+G G+MG GIA +++K++N +
Sbjct: 293 LFLNDQELKKKAKAYDEIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350
Query: 184 LKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 243
+G+ + G V +G++T K L ++ L Y +F VD+V+EAV+E+ +KQ
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410
Query: 244 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303
+ +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R E++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470
Query: 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRS 363
S I + K + K P+VV +C GF VNR FPY LVS GVD RID +
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530
Query: 364 FGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421
FG P+GP L+D+ G + FPDR + +D+L ++ R G+ NGKG Y
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590
Query: 422 TYEKGSKPK----PDPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNE 473
YE K K DPSVL PI+ E R VT+++I+ ++ P+ E
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLKPIVYEQRE------------VTDEDIINWMMIPLCLE 638
Query: 474 SCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFF 533
+ R LE+GIV A++ D V G+ FP +RGG + + D++G +++ L G +
Sbjct: 639 TVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALY 697
Query: 534 KPSRFLEERATKG 546
P+ L E A G
Sbjct: 698 HPTAKLREMAKNG 710
>sp|B0KH74|FADB_PSEPG Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain GB-1) GN=fadB PE=3 SV=1
Length = 715
Score = 254 bits (648), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+G +DAVV E +L+K + LD A+R+P + L KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F +L +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
L+ +F + + D V++ AV+G G+MG GIA + +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + V +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E ILA+NTSTI +N++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE + KP D +VL PI+ E R VT+++I+ ++
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693
Query: 529 YGNFFKPSRFLEERATKG 546
G + P+ L E A G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710
>sp|A3QFP3|FADJ_SHELP Fatty acid oxidation complex subunit alpha OS=Shewanella loihica
(strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1
Length = 706
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 183/555 (32%), Positives = 285/555 (51%), Gaps = 27/555 (4%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR--RKPWIRSLHRTDKLGS 58
MML K + +++ K+GL+D VV LL+ + AL AR +KP + ++ + L
Sbjct: 165 MMLTGKQLRAKQALKMGLVDDVVPESILLQTAIEMAL-AGARPAKKPKLSTVEKL--LEG 221
Query: 59 LSEAREVLKLARLQA--KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLD 116
R ++ L+ KKT N P + +D + +G+ G G+ EA+ F +LV+ +
Sbjct: 222 TPVGRNIIFEQALKQVNKKTQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSN 281
Query: 117 TSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVL 175
S L +FFA K D+ P+ V KV V+GGGLMG GIA+ I V +
Sbjct: 282 ESEALRSIFFATTEMKKESGAGDV--SPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRV 339
Query: 176 KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVI 235
K+++ L + + V R +T +N + ++ +Y KD DMV+EAV
Sbjct: 340 KDISEIGLSNALAYAYKLLAKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVF 399
Query: 236 ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 295
E + LK ++ ++E+ C H I A+NTS++ + + E + +IG H+FSP MPL+
Sbjct: 400 EDLNLKHQMVKDVERECGEHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLV 459
Query: 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVF 355
E++ ++TS Q I + + K P+VV + GF VNR Y A L+ G V
Sbjct: 460 EVIAHDKTSPQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVD 519
Query: 356 RIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLV-DLLLKSGRNGK 414
+D A+ FG P+GP LLD G V A S +K +R F++P D LL R G+
Sbjct: 520 HLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGER-FKAPAAFDKLLADDRKGR 578
Query: 415 ANGKGLYTYEKGSKPK-PDPSVLPIIEECRRLSNIMPG--GKPISVTEKEIVEMILFPVV 471
NGKG Y Y SK K D SV ++ + PG G+PI++ E+ +V+M+
Sbjct: 579 KNGKGFYQYGAKSKKKLVDESVYGVL-------GLTPGADGEPIALAERCVVQML----- 626
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R LEEGI+ D D ++ G+ FP + GG + D++GA ++ +LK++ +G+
Sbjct: 627 NEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQFGD 686
Query: 532 FFKPSRFLEERATKG 546
F P L E A G
Sbjct: 687 RFAPCDRLVEMAESG 701
>sp|Q88L02|FADB_PSEPK Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
(strain KT2440) GN=fadB PE=3 SV=1
Length = 715
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/558 (31%), Positives = 277/558 (49%), Gaps = 36/558 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+G +DAVV E +L+K + LD A+R+P + L KL +
Sbjct: 172 KENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F +L +
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVA 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
L+ +F + + D V++ AV+G G+MG GIA + +++K++
Sbjct: 288 ESLIGLFLNDQELKRKAKAHD--EIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
E + G+ + V +G+LT K AL ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 REEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E ILA+NTSTI +N++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + VD L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE + KP D +VL PI+ E R VT+++I+ ++
Sbjct: 586 GKGFYAYETDKRGKPKKVFDATVLDVLKPIVFEQR------------EVTDEDIINWMMV 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G +++ L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL 693
Query: 529 YGNFFKPSRFLEERATKG 546
G + P+ L E A G
Sbjct: 694 -GPLYHPTAKLREMAKNG 710
>sp|Q0TFA6|FADJ_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/550 (31%), Positives = 279/550 (50%), Gaps = 29/550 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQAVKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L ++FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRNIFFASTEVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCATHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G + ID
Sbjct: 461 PHASTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 TALVKFGFPVGPIQLLDEVGIDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ L+E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVCCLDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKP-SRFLE 540
F P +RF+E
Sbjct: 688 RFTPCNRFVE 697
>sp|Q9DBM2|ECHP_MOUSE Peroxisomal bifunctional enzyme OS=Mus musculus GN=Ehhadh PE=1 SV=4
Length = 718
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 276/561 (49%), Gaps = 30/561 (5%)
Query: 6 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREV 65
+ I+++E KLG++D VV S+ + + + I +P R L++ + SL V
Sbjct: 154 RHISTDEALKLGILDVVVKSDPVEEAIKFAQTVIGKPIEPR-RILNKP--VPSLPNMDSV 210
Query: 66 LKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF 125
A + +K P + C+ ++ + H + +EAK+F L +R L + F
Sbjct: 211 FAEAIAKVRKQYPGRLAPETCVRSVQASVKHPYEVAIKEEAKLFMYLRGSGQARALQYAF 270
Query: 126 FAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182
FA+++ +K + K + V V V+G G MG GIA + I VV E + +
Sbjct: 271 FAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGIPVVAVESDPKQ 330
Query: 183 LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQ 242
L K I + + ++ K N L+ E VD+VIEAV E + LK+
Sbjct: 331 LDTAKKIITSTLEKEASKSGQASAKPN-----LRFSSSTKELSSVDLVIEAVFEDMNLKK 385
Query: 243 KIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 302
K+F+EL C P L TNTS +D++ + T +IG HFFSPAH+M LLE++ +
Sbjct: 386 KVFAELSALCKPGAFLCTNTSALDVDDIASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRY 445
Query: 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIR 362
+S I +M++ K I K+ VVVGNC GF NR PY L+ G +D +
Sbjct: 446 SSPTTIATVMSLSKRIGKIGVVVGNCYGFVGNRMLAPYYNQGYFLIEEGSKPEDVDGVLE 505
Query: 363 SFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLVDLLLKSGR 411
FG +GPF++ DLAG V T P R + SP+ D+L ++GR
Sbjct: 506 EFGFRMGPFRVSDLAGLDVGWKVRKGQGLTGPSLPPGTPTRKRGNTRYSPIADMLCEAGR 565
Query: 412 NGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFP 469
G+ GKG Y Y+K G KPDP + + + R +I K S++++EI+E L+
Sbjct: 566 FGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETHHI----KQRSISKEEILERCLYS 621
Query: 470 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY 529
++NE+ R+LEEG+ +D + G +P + GG +++A +VG V L+K+ +
Sbjct: 622 LINEAFRILEEGMAASPEHIDVIYLHGYGWPRHVGGPMYYAASVGLPTVLEKLQKYYRQN 681
Query: 530 GNF--FKPSRFLEERATKGIP 548
+ +PS +L +G P
Sbjct: 682 PDIPQLEPSDYLRRLVAQGSP 702
>sp|B1IXA5|FADJ_ECOLC Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1
Length = 714
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+ A+++ + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ C H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E + +G
Sbjct: 688 RFTPCERLVEMSKRG 702
>sp|P28793|FADB_PSEFR Fatty acid oxidation complex subunit alpha OS=Pseudomonas fragi
GN=fadB PE=1 SV=1
Length = 715
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/558 (31%), Positives = 280/558 (50%), Gaps = 36/558 (6%)
Query: 6 KSITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGS 58
K +E+ K+ +DAVVT++ +L+K + LD A+R+P + L KL +
Sbjct: 172 KENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKL----KLNA 227
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
+ + A + PN P + I++ G + EA F +L S
Sbjct: 228 IEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSAS 287
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
L+ +F + K V D K V++ AV+G G+MG GIA +++K++
Sbjct: 288 NCLIGLFLNDQELKKKAKVYDKIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDI 345
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + +G+ + G V +G++T K L ++ L Y +F +VD+V+EAV+E+
Sbjct: 346 NEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENP 405
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
+KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++
Sbjct: 406 KVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVI 465
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
R E++S + + K + K P+VV +C GF VNR FPY LVS GVD RID
Sbjct: 466 RGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRID 525
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKAN 416
+ FG P+GP L+D+ G + FPDR + +D L ++ R G+ N
Sbjct: 526 KVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKN 585
Query: 417 GKGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKPISVTEKEIVEMILF 468
GKG Y YE K K D SVL PI+ E R VT+++I+ ++
Sbjct: 586 GKGFYAYEADKKGKQKKLVDSSVLEVLKPIVYEQR------------DVTDEDIINWMMI 633
Query: 469 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 528
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQYAEL 693
Query: 529 YGNFFKPSRFLEERATKG 546
G + P+ L E A G
Sbjct: 694 -GALYHPTAKLREMAKNG 710
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 252 bits (644), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 174/555 (31%), Positives = 278/555 (50%), Gaps = 28/555 (5%)
Query: 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GS 58
M+L K + +++ KLGL+D VV LL+V A+++A + +P R L +++ G
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGP 222
Query: 59 LSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS 118
L A + + KT N P + L+V+E G+ G SG EA+ F EL M S
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282
Query: 119 RGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEV 178
+ L +FFA K P +D P + G G TA + V +K++
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDI 340
Query: 179 NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238
N + + +K + G V R L + + L ++ G DY F D++IEAV E++
Sbjct: 341 NPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENL 400
Query: 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV 298
LKQ++ +E+E+ H I A+NTS++ + + + +++IG HFFSP MPL+EI+
Sbjct: 401 ELKQQMVAEVEQNSAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEII 460
Query: 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRID 358
TSAQ I + + K K P+VV + GF VNR PY A +++ G V ID
Sbjct: 461 PHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHID 520
Query: 359 SAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKAN 416
+A+ FG P+GP QLLD G + A+ +R F +P +V +L R G+ N
Sbjct: 521 AALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKN 579
Query: 417 GKGLYTY-EKG--SKPKPDPSVLPII--EECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471
G+G Y Y +KG SK + DP++ P+I + RLS ++ E + ++
Sbjct: 580 GRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLS------------APQVAERCVMLML 627
Query: 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN 531
NE+ R ++E ++ D D +V G+ FP + GG + D++GA V +++ + YG+
Sbjct: 628 NEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGS 687
Query: 532 FFKPSRFLEERATKG 546
F P L E +G
Sbjct: 688 RFTPCERLVEMGARG 702
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,702,307
Number of Sequences: 539616
Number of extensions: 8810968
Number of successful extensions: 27031
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 25876
Number of HSP's gapped (non-prelim): 299
length of query: 563
length of database: 191,569,459
effective HSP length: 123
effective length of query: 440
effective length of database: 125,196,691
effective search space: 55086544040
effective search space used: 55086544040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)