Query 008509
Match_columns 563
No_of_seqs 518 out of 4088
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 05:13:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008509.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008509hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 2E-106 6E-111 899.6 55.1 543 1-552 170-731 (742)
2 2wtb_A MFP2, fatty acid multif 100.0 6.2E-98 2E-102 836.5 60.5 549 1-552 166-717 (725)
3 1wdk_A Fatty oxidation complex 100.0 7.1E-98 2E-102 835.8 51.4 540 1-551 167-715 (715)
4 3k6j_A Protein F01G10.3, confi 100.0 1.3E-85 4.4E-90 693.4 41.9 415 123-550 26-448 (460)
5 1zcj_A Peroxisomal bifunctiona 100.0 1.9E-81 6.5E-86 672.1 41.3 431 114-550 1-449 (463)
6 3mog_A Probable 3-hydroxybutyr 100.0 6.8E-79 2.3E-83 652.1 44.4 401 146-552 4-476 (483)
7 3ado_A Lambda-crystallin; L-gu 100.0 3.6E-58 1.2E-62 463.7 26.4 268 146-424 5-281 (319)
8 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 9.2E-56 3.1E-60 442.8 26.6 257 147-425 12-273 (293)
9 4e12_A Diketoreductase; oxidor 100.0 4.6E-55 1.6E-59 440.0 28.5 275 146-423 3-283 (283)
10 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 1.4E-53 4.9E-58 433.4 34.4 281 144-424 12-302 (302)
11 2dpo_A L-gulonate 3-dehydrogen 100.0 8.1E-46 2.8E-50 376.5 27.9 243 146-389 5-255 (319)
12 3mog_A Probable 3-hydroxybutyr 99.9 4.4E-24 1.5E-28 228.2 16.6 150 261-416 324-476 (483)
13 3ctv_A HBD-10, 3-hydroxyacyl-C 99.9 1E-24 3.6E-29 186.2 4.7 103 317-419 3-109 (110)
14 2ewd_A Lactate dehydrogenase,; 99.8 2.1E-21 7.1E-26 197.8 8.1 201 148-384 5-235 (317)
15 3ctv_A HBD-10, 3-hydroxyacyl-C 99.8 4E-20 1.4E-24 157.6 6.0 85 458-546 15-100 (110)
16 3tri_A Pyrroline-5-carboxylate 99.8 5.1E-18 1.7E-22 169.5 18.4 153 147-324 3-161 (280)
17 3d1l_A Putative NADP oxidoredu 99.8 1.2E-18 4.1E-23 172.9 13.6 211 148-388 11-247 (266)
18 3gt0_A Pyrroline-5-carboxylate 99.7 1.1E-16 3.8E-21 157.0 18.8 188 148-361 3-204 (247)
19 3ggo_A Prephenate dehydrogenas 99.7 4.9E-16 1.7E-20 157.5 20.9 165 146-336 32-215 (314)
20 3obb_A Probable 3-hydroxyisobu 99.7 1.8E-16 6.1E-21 159.5 16.5 189 146-366 2-214 (300)
21 2h78_A Hibadh, 3-hydroxyisobut 99.7 5.6E-16 1.9E-20 156.5 17.9 192 146-365 2-213 (302)
22 3qsg_A NAD-binding phosphogluc 99.7 3.2E-16 1.1E-20 159.1 13.8 186 146-364 23-231 (312)
23 3doj_A AT3G25530, dehydrogenas 99.7 3.6E-16 1.2E-20 158.6 14.0 192 145-365 19-231 (310)
24 3g0o_A 3-hydroxyisobutyrate de 99.7 1.6E-15 5.3E-20 153.4 17.1 192 147-365 7-219 (303)
25 2i76_A Hypothetical protein; N 99.7 2.6E-16 9E-21 156.9 11.1 210 148-393 3-240 (276)
26 4gbj_A 6-phosphogluconate dehy 99.7 7.5E-16 2.6E-20 155.0 14.2 186 148-365 6-214 (297)
27 3pef_A 6-phosphogluconate dehy 99.6 1.5E-15 5E-20 152.4 16.0 189 148-365 2-211 (287)
28 3qha_A Putative oxidoreductase 99.6 2E-15 7E-20 152.0 15.8 185 148-361 16-222 (296)
29 3pdu_A 3-hydroxyisobutyrate de 99.6 2.1E-15 7.3E-20 151.2 14.2 192 147-365 1-211 (287)
30 4dll_A 2-hydroxy-3-oxopropiona 99.6 4.6E-15 1.6E-19 151.1 16.7 192 146-365 30-239 (320)
31 3dfu_A Uncharacterized protein 99.6 3.9E-15 1.3E-19 142.7 12.9 158 147-357 6-173 (232)
32 2y0c_A BCEC, UDP-glucose dehyd 99.6 9.2E-15 3.1E-19 156.3 16.0 200 148-361 9-257 (478)
33 3c24_A Putative oxidoreductase 99.6 1.5E-14 5.2E-19 144.8 15.4 188 147-361 11-228 (286)
34 2izz_A Pyrroline-5-carboxylate 99.6 5.6E-14 1.9E-18 143.2 18.9 152 147-324 22-184 (322)
35 1f0y_A HCDH, L-3-hydroxyacyl-C 99.6 3.9E-15 1.3E-19 150.4 10.1 91 459-553 203-302 (302)
36 3g79_A NDP-N-acetyl-D-galactos 99.6 5E-14 1.7E-18 149.6 17.5 203 146-361 17-270 (478)
37 2uyy_A N-PAC protein; long-cha 99.6 1.9E-14 6.5E-19 146.3 13.3 187 147-361 30-235 (316)
38 1yqg_A Pyrroline-5-carboxylate 99.6 1.3E-13 4.4E-18 136.2 19.0 149 148-326 1-152 (263)
39 3l6d_A Putative oxidoreductase 99.6 9E-14 3.1E-18 140.6 17.8 189 146-363 8-214 (306)
40 4ezb_A Uncharacterized conserv 99.5 1.5E-13 5.1E-18 139.6 18.9 193 147-364 24-233 (317)
41 1zej_A HBD-9, 3-hydroxyacyl-CO 99.5 4E-15 1.4E-19 148.5 6.2 92 461-554 174-273 (293)
42 1zcj_A Peroxisomal bifunctiona 99.5 4E-14 1.4E-18 151.1 12.7 108 302-411 331-446 (463)
43 3cky_A 2-hydroxymethyl glutara 99.5 1E-13 3.5E-18 139.7 14.9 187 147-361 4-209 (301)
44 3b1f_A Putative prephenate deh 99.5 1.1E-13 3.9E-18 138.7 14.8 157 146-326 5-180 (290)
45 3ktd_A Prephenate dehydrogenas 99.5 7.1E-14 2.4E-18 142.6 12.9 153 146-326 7-186 (341)
46 2ahr_A Putative pyrroline carb 99.5 7.4E-13 2.5E-17 130.5 18.5 151 147-327 3-155 (259)
47 2f1k_A Prephenate dehydrogenas 99.5 1E-12 3.6E-17 130.9 19.2 164 148-336 1-177 (279)
48 1vpd_A Tartronate semialdehyde 99.5 3.9E-13 1.3E-17 135.3 16.2 184 148-361 6-210 (299)
49 4e21_A 6-phosphogluconate dehy 99.5 7.6E-13 2.6E-17 136.2 18.5 174 147-350 22-233 (358)
50 2gf2_A Hibadh, 3-hydroxyisobut 99.5 9.3E-14 3.2E-18 139.7 11.1 182 148-361 1-205 (296)
51 1mv8_A GMD, GDP-mannose 6-dehy 99.5 6E-13 2.1E-17 141.1 17.7 200 148-361 1-245 (436)
52 4a7p_A UDP-glucose dehydrogena 99.5 2.5E-13 8.4E-18 143.5 14.1 200 148-361 9-251 (446)
53 2q3e_A UDP-glucose 6-dehydroge 99.5 3E-13 1E-17 144.6 14.9 201 147-361 5-256 (467)
54 2g5c_A Prephenate dehydrogenas 99.5 1.7E-12 5.9E-17 129.4 19.4 155 147-327 1-173 (281)
55 3pid_A UDP-glucose 6-dehydroge 99.5 7.9E-13 2.7E-17 138.4 17.5 196 146-361 35-268 (432)
56 1yb4_A Tartronic semialdehyde 99.5 1.6E-13 5.5E-18 137.8 11.4 183 147-361 3-207 (295)
57 3hrx_A Probable enoyl-COA hydr 99.5 7.7E-14 2.6E-18 137.1 8.7 97 1-133 155-251 (254)
58 3ojo_A CAP5O; rossmann fold, c 99.5 1E-12 3.4E-17 137.8 17.6 196 148-361 12-250 (431)
59 2ew2_A 2-dehydropantoate 2-red 99.5 7.8E-13 2.7E-17 133.9 16.1 168 147-328 3-184 (316)
60 4fzw_A 2,3-dehydroadipyl-COA h 99.5 8E-14 2.7E-18 137.1 8.4 97 1-133 159-255 (258)
61 4e12_A Diketoreductase; oxidor 99.5 1.5E-14 5.2E-19 144.6 3.2 88 458-552 188-283 (283)
62 3gg2_A Sugar dehydrogenase, UD 99.5 3.9E-12 1.3E-16 134.9 21.5 201 148-361 3-247 (450)
63 4fzw_C 1,2-epoxyphenylacetyl-C 99.4 1.4E-13 4.9E-18 136.4 8.5 97 1-133 175-271 (274)
64 3k96_A Glycerol-3-phosphate de 99.4 1.3E-12 4.6E-17 134.4 15.8 168 146-330 28-208 (356)
65 2p4q_A 6-phosphogluconate dehy 99.4 1.1E-12 3.7E-17 140.8 15.6 190 148-361 11-226 (497)
66 4gwg_A 6-phosphogluconate dehy 99.4 6.4E-13 2.2E-17 141.3 13.0 192 146-361 3-221 (484)
67 2rcy_A Pyrroline carboxylate r 99.4 2.4E-12 8.3E-17 126.9 16.3 147 147-327 4-156 (262)
68 2hjr_A Malate dehydrogenase; m 99.4 5.1E-13 1.7E-17 136.0 11.0 122 148-283 15-155 (328)
69 4huj_A Uncharacterized protein 99.4 6.4E-13 2.2E-17 127.7 10.8 154 145-327 21-198 (220)
70 3kqf_A Enoyl-COA hydratase/iso 99.4 3.5E-13 1.2E-17 133.1 8.5 96 1-132 166-261 (265)
71 3moy_A Probable enoyl-COA hydr 99.4 3.4E-13 1.2E-17 133.0 8.1 97 1-133 164-260 (263)
72 3h81_A Enoyl-COA hydratase ECH 99.4 4E-13 1.4E-17 133.4 8.4 96 1-132 179-274 (278)
73 2o3j_A UDP-glucose 6-dehydroge 99.4 3.9E-12 1.3E-16 136.3 16.7 200 146-361 8-262 (481)
74 2cvz_A Dehydrogenase, 3-hydrox 99.4 1.8E-12 6.3E-17 129.6 13.3 184 148-361 2-200 (289)
75 3hin_A Putative 3-hydroxybutyr 99.4 2.7E-13 9.3E-18 134.4 7.0 98 1-134 170-267 (275)
76 3trr_A Probable enoyl-COA hydr 99.4 4.9E-13 1.7E-17 131.3 8.7 97 1-133 157-253 (256)
77 2zyd_A 6-phosphogluconate dehy 99.4 6.3E-12 2.1E-16 134.4 17.8 191 146-361 14-231 (480)
78 3p5m_A Enoyl-COA hydratase/iso 99.4 6.5E-13 2.2E-17 130.4 8.8 96 1-132 156-251 (255)
79 3swx_A Probable enoyl-COA hydr 99.4 7.5E-13 2.6E-17 130.8 8.9 96 1-132 166-261 (265)
80 3gow_A PAAG, probable enoyl-CO 99.4 6.8E-13 2.3E-17 130.2 8.5 96 1-132 155-250 (254)
81 3pea_A Enoyl-COA hydratase/iso 99.4 3.2E-13 1.1E-17 133.1 6.2 96 1-132 162-257 (261)
82 3i47_A Enoyl COA hydratase/iso 99.4 5.3E-13 1.8E-17 131.9 7.8 98 1-134 162-260 (268)
83 2pv7_A T-protein [includes: ch 99.4 4.5E-12 1.5E-16 127.5 14.6 138 147-326 21-165 (298)
84 3rsi_A Putative enoyl-COA hydr 99.4 8.4E-13 2.9E-17 130.4 8.7 96 1-132 166-261 (265)
85 3qxi_A Enoyl-COA hydratase ECH 99.4 7.9E-13 2.7E-17 130.5 8.5 97 1-133 166-262 (265)
86 3myb_A Enoyl-COA hydratase; ss 99.4 7.3E-13 2.5E-17 132.1 8.1 98 1-134 182-279 (286)
87 1jay_A Coenzyme F420H2:NADP+ o 99.4 9.9E-12 3.4E-16 118.4 15.7 157 148-327 1-181 (212)
88 3g64_A Putative enoyl-COA hydr 99.4 9.4E-13 3.2E-17 131.1 8.5 97 1-133 178-274 (279)
89 1t2d_A LDH-P, L-lactate dehydr 99.4 1.8E-12 6.3E-17 131.5 10.7 123 147-283 4-150 (322)
90 1i36_A Conserved hypothetical 99.4 9.6E-12 3.3E-16 122.8 15.6 179 148-365 1-198 (264)
91 2iz1_A 6-phosphogluconate dehy 99.3 1.8E-11 6.1E-16 131.0 18.6 190 147-361 5-222 (474)
92 3qxz_A Enoyl-COA hydratase/iso 99.3 7.7E-13 2.6E-17 130.6 7.1 97 1-133 162-261 (265)
93 4f47_A Enoyl-COA hydratase ECH 99.3 9.4E-13 3.2E-17 131.0 7.6 96 1-132 179-274 (278)
94 2wtb_A MFP2, fatty acid multif 99.3 9.1E-13 3.1E-17 147.6 8.4 89 458-553 493-589 (725)
95 1np3_A Ketol-acid reductoisome 99.3 3.9E-12 1.3E-16 130.3 11.9 182 147-357 16-223 (338)
96 3tlf_A Enoyl-COA hydratase/iso 99.3 1.1E-12 3.7E-17 130.3 7.6 96 1-132 173-270 (274)
97 3r9t_A ECHA1_1; ssgcid, seattl 99.3 5.1E-13 1.8E-17 132.0 4.9 96 1-132 165-263 (267)
98 2pbp_A Enoyl-COA hydratase sub 99.3 1.7E-12 5.8E-17 127.8 8.2 96 1-132 159-254 (258)
99 2ppy_A Enoyl-COA hydratase; be 99.3 1.9E-12 6.7E-17 127.8 8.6 96 1-132 166-261 (265)
100 3sll_A Probable enoyl-COA hydr 99.3 1.3E-12 4.4E-17 130.6 7.3 97 1-133 188-286 (290)
101 1sg4_A 3,2-trans-enoyl-COA iso 99.3 8.7E-13 3E-17 129.9 5.9 97 1-133 163-259 (260)
102 3zwc_A Peroxisomal bifunctiona 99.3 5E-12 1.7E-16 140.9 12.4 120 304-425 612-739 (742)
103 3k6j_A Protein F01G10.3, confi 99.3 1.2E-12 4.1E-17 138.0 6.8 117 303-421 331-455 (460)
104 1mj3_A Enoyl-COA hydratase, mi 99.3 2.2E-12 7.4E-17 127.1 8.2 96 1-132 161-256 (260)
105 2pgd_A 6-phosphogluconate dehy 99.3 2.1E-11 7.1E-16 130.8 16.2 191 148-362 3-220 (482)
106 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.3 2.9E-11 1E-15 129.3 17.2 193 148-361 2-220 (478)
107 1pzg_A LDH, lactate dehydrogen 99.3 4.2E-12 1.4E-16 129.4 9.8 123 147-283 9-156 (331)
108 1nzy_A Dehalogenase, 4-chlorob 99.3 2.4E-12 8.2E-17 127.5 7.8 97 1-133 164-260 (269)
109 1uiy_A Enoyl-COA hydratase; ly 99.3 2.3E-12 7.8E-17 126.5 7.5 95 1-131 157-251 (253)
110 2raf_A Putative dinucleotide-b 99.3 2.2E-11 7.5E-16 115.9 14.1 135 146-327 18-176 (209)
111 1wdk_A Fatty oxidation complex 99.3 1.3E-12 4.6E-17 146.1 6.5 90 458-553 495-593 (715)
112 2ej5_A Enoyl-COA hydratase sub 99.3 2.3E-12 8E-17 126.7 7.3 96 1-132 158-253 (257)
113 3dtt_A NADP oxidoreductase; st 99.3 3.9E-11 1.3E-15 117.2 15.9 165 146-327 18-213 (245)
114 3r9q_A Enoyl-COA hydratase/iso 99.3 1.4E-12 4.7E-17 128.5 5.5 93 1-131 165-257 (262)
115 3qmj_A Enoyl-COA hydratase, EC 99.3 7.5E-13 2.6E-17 130.1 3.5 94 1-130 163-256 (256)
116 2vx2_A Enoyl-COA hydratase dom 99.3 3.7E-12 1.3E-16 127.0 8.3 96 1-132 189-284 (287)
117 3qre_A Enoyl-COA hydratase, EC 99.3 9.1E-13 3.1E-17 132.1 3.5 98 1-134 194-292 (298)
118 1ef8_A Methylmalonyl COA decar 99.3 3.3E-12 1.1E-16 125.9 7.3 96 1-132 160-257 (261)
119 1wz8_A Enoyl-COA hydratase; ly 99.3 3.9E-12 1.3E-16 125.6 7.7 94 1-131 168-261 (264)
120 2gtr_A CDY-like, chromodomain 99.3 2.1E-12 7.2E-17 127.3 5.5 95 1-131 165-259 (261)
121 2f6q_A Peroxisomal 3,2-trans-e 99.3 2.8E-12 9.7E-17 127.6 6.1 95 1-131 185-279 (280)
122 2i6t_A Ubiquitin-conjugating e 99.3 7.8E-12 2.7E-16 125.5 9.0 117 144-283 11-149 (303)
123 2fbm_A Y chromosome chromodoma 99.3 2.6E-12 9E-17 128.3 5.4 97 1-133 183-280 (291)
124 1dci_A Dienoyl-COA isomerase; 99.2 7.3E-12 2.5E-16 124.4 7.7 95 1-131 172-270 (275)
125 4hdt_A 3-hydroxyisobutyryl-COA 99.2 1.3E-11 4.4E-16 126.5 9.0 134 1-134 168-323 (353)
126 3fdu_A Putative enoyl-COA hydr 99.2 5.6E-12 1.9E-16 124.5 6.0 95 1-134 163-257 (266)
127 3oc7_A Enoyl-COA hydratase; se 99.2 1E-11 3.5E-16 122.8 7.5 94 1-132 171-264 (267)
128 4eml_A Naphthoate synthase; 1, 99.2 1.2E-11 4.1E-16 122.6 7.7 96 1-133 173-268 (275)
129 2vns_A Metalloreductase steap3 99.2 1.9E-11 6.6E-16 116.9 8.7 150 146-327 27-194 (215)
130 2a7k_A CARB; crotonase, antibi 99.2 3.2E-12 1.1E-16 125.2 3.2 94 1-130 157-250 (250)
131 3lke_A Enoyl-COA hydratase; ny 99.2 5.7E-12 2E-16 124.2 4.7 96 1-132 165-261 (263)
132 2uzf_A Naphthoate synthase; ly 99.2 1.4E-11 4.7E-16 122.2 7.1 95 1-133 171-266 (273)
133 1dlj_A UDP-glucose dehydrogena 99.2 4.3E-10 1.5E-14 117.7 18.3 200 148-361 1-239 (402)
134 1evy_A Glycerol-3-phosphate de 99.2 8.6E-11 2.9E-15 121.7 12.6 167 147-330 15-202 (366)
135 3h0u_A Putative enoyl-COA hydr 99.2 1.9E-11 6.4E-16 122.0 7.2 90 1-127 168-257 (289)
136 3gkb_A Putative enoyl-COA hydr 99.2 1.2E-11 4.1E-16 123.3 5.7 91 1-130 171-261 (287)
137 1hzd_A AUH, AU-binding protein 99.2 1.7E-11 5.7E-16 121.5 6.6 96 1-132 169-268 (272)
138 3t8b_A 1,4-dihydroxy-2-naphtho 99.2 5.7E-12 2E-16 127.9 3.2 96 1-133 232-327 (334)
139 1x0v_A GPD-C, GPDH-C, glycerol 99.2 5.3E-11 1.8E-15 122.6 10.5 169 147-330 8-201 (354)
140 3t89_A 1,4-dihydroxy-2-naphtho 99.2 1.6E-11 5.4E-16 122.5 6.2 96 1-133 187-282 (289)
141 3rrv_A Enoyl-COA hydratase/iso 99.2 1.5E-11 5.2E-16 121.9 6.0 91 1-129 186-276 (276)
142 2j5i_A P-hydroxycinnamoyl COA 99.2 1.2E-11 4E-16 122.9 4.8 93 1-129 170-265 (276)
143 1a5z_A L-lactate dehydrogenase 99.2 1.2E-10 4.2E-15 118.1 12.2 150 148-334 1-170 (319)
144 3lao_A Enoyl-COA hydratase/iso 99.2 1.2E-11 4.2E-16 121.5 4.7 90 1-126 169-258 (258)
145 3l3s_A Enoyl-COA hydratase/iso 99.2 1.7E-11 5.7E-16 120.9 5.0 92 1-128 167-258 (263)
146 3hwr_A 2-dehydropantoate 2-red 99.2 1.6E-10 5.5E-15 117.2 12.4 173 146-338 18-200 (318)
147 1ks9_A KPA reductase;, 2-dehyd 99.2 8.9E-11 3E-15 117.2 10.3 168 148-338 1-179 (291)
148 1ur5_A Malate dehydrogenase; o 99.1 1.2E-10 4.1E-15 117.6 11.0 121 148-283 3-143 (309)
149 3vtf_A UDP-glucose 6-dehydroge 99.1 1.4E-09 4.9E-14 113.7 19.4 204 146-366 20-271 (444)
150 3qk8_A Enoyl-COA hydratase ECH 99.1 3.5E-11 1.2E-15 119.1 6.6 93 1-133 171-266 (272)
151 1yj8_A Glycerol-3-phosphate de 99.1 1.3E-10 4.6E-15 120.7 11.4 168 147-330 21-218 (375)
152 3pe8_A Enoyl-COA hydratase; em 99.1 2.2E-11 7.4E-16 119.4 3.2 96 1-132 156-254 (256)
153 3hp0_A Putative polyketide bio 99.1 7.2E-11 2.5E-15 116.4 6.5 95 1-134 163-257 (267)
154 3isa_A Putative enoyl-COA hydr 99.1 7.2E-11 2.5E-15 115.7 6.4 91 1-134 159-249 (254)
155 2qyt_A 2-dehydropantoate 2-red 99.1 9E-10 3.1E-14 111.4 14.5 166 147-328 8-194 (317)
156 3he2_A Enoyl-COA hydratase ECH 99.1 8.7E-11 3E-15 115.5 6.4 91 1-133 171-261 (264)
157 1z82_A Glycerol-3-phosphate de 99.1 1.6E-09 5.5E-14 110.7 15.0 154 148-328 15-181 (335)
158 2q35_A CURF; crotonase, lyase; 99.1 6.5E-11 2.2E-15 115.3 4.2 90 1-126 154-243 (243)
159 3ado_A Lambda-crystallin; L-gu 99.1 2.7E-10 9.2E-15 114.6 8.9 232 311-555 21-290 (319)
160 2v6b_A L-LDH, L-lactate dehydr 99.0 3.2E-10 1.1E-14 114.2 8.9 120 148-283 1-138 (304)
161 2d4a_B Malate dehydrogenase; a 99.0 5.2E-10 1.8E-14 112.7 9.9 120 149-283 1-140 (308)
162 3bpt_A 3-hydroxyisobutyryl-COA 99.0 3.2E-10 1.1E-14 116.8 7.4 129 1-131 165-327 (363)
163 1txg_A Glycerol-3-phosphate de 99.0 3.7E-09 1.2E-13 107.8 14.9 163 148-329 1-183 (335)
164 3ghy_A Ketopantoate reductase 99.0 9.4E-10 3.2E-14 112.4 10.2 170 147-331 3-202 (335)
165 3fr7_A Putative ketol-acid red 99.0 4.2E-10 1.4E-14 117.2 7.5 154 147-323 54-232 (525)
166 4di1_A Enoyl-COA hydratase ECH 98.9 4.6E-10 1.6E-14 111.2 5.3 86 1-132 179-264 (277)
167 3hn2_A 2-dehydropantoate 2-red 98.9 8.8E-09 3E-13 104.1 14.5 174 148-337 3-188 (312)
168 3ju1_A Enoyl-COA hydratase/iso 98.9 6.7E-10 2.3E-14 115.7 6.1 129 1-131 205-372 (407)
169 3tl2_A Malate dehydrogenase; c 98.9 4.9E-09 1.7E-13 105.6 12.1 102 145-259 6-124 (315)
170 1hyh_A L-hicdh, L-2-hydroxyiso 98.9 9.5E-09 3.2E-13 103.7 14.0 119 148-283 2-146 (309)
171 3ldh_A Lactate dehydrogenase; 98.9 2.3E-09 7.9E-14 108.1 9.1 101 145-259 19-135 (330)
172 3gvi_A Malate dehydrogenase; N 98.9 5.1E-09 1.8E-13 105.8 11.4 124 146-284 6-149 (324)
173 3m6n_A RPFF protein; enoyl-COA 98.9 1.3E-09 4.4E-14 109.6 6.2 96 1-133 204-299 (305)
174 2np9_A DPGC; protein inhibitor 98.9 6.6E-10 2.3E-14 115.9 4.1 91 1-131 347-440 (440)
175 2j5g_A ALR4455 protein; enzyme 98.9 1.4E-09 4.7E-14 107.0 6.1 83 1-130 181-263 (263)
176 2w2k_A D-mandelate dehydrogena 98.9 2.1E-09 7.2E-14 110.1 7.8 117 148-288 164-285 (348)
177 3i83_A 2-dehydropantoate 2-red 98.9 1E-08 3.5E-13 104.0 12.4 173 148-336 3-189 (320)
178 2gcg_A Glyoxylate reductase/hy 98.9 1.5E-09 5.2E-14 110.5 6.2 117 148-289 156-276 (330)
179 3p7m_A Malate dehydrogenase; p 98.9 5.5E-09 1.9E-13 105.6 10.2 124 146-284 4-147 (321)
180 1guz_A Malate dehydrogenase; o 98.9 1.6E-08 5.5E-13 102.0 13.4 121 148-283 1-142 (310)
181 2yjz_A Metalloreductase steap4 98.3 3.2E-10 1.1E-14 107.0 0.0 149 147-327 19-182 (201)
182 3ba1_A HPPR, hydroxyphenylpyru 98.8 1.2E-09 4.2E-14 110.9 4.1 111 148-287 165-279 (333)
183 1ldn_A L-lactate dehydrogenase 98.8 9.6E-09 3.3E-13 103.9 10.1 122 146-283 5-147 (316)
184 2dbq_A Glyoxylate reductase; D 98.8 1.9E-09 6.6E-14 109.8 4.7 116 147-288 150-269 (334)
185 3c7a_A Octopine dehydrogenase; 98.8 5.6E-09 1.9E-13 109.5 7.5 109 147-268 2-122 (404)
186 1lld_A L-lactate dehydrogenase 98.8 3E-08 1E-12 100.4 12.6 105 147-265 7-127 (319)
187 2d0i_A Dehydrogenase; structur 98.8 4.3E-09 1.5E-13 107.2 5.5 112 148-287 147-263 (333)
188 1obb_A Maltase, alpha-glucosid 98.7 8.1E-08 2.8E-12 101.7 13.9 76 148-235 4-86 (480)
189 1oju_A MDH, malate dehydrogena 98.7 6.3E-08 2.1E-12 96.5 11.9 110 148-272 1-126 (294)
190 3ot6_A Enoyl-COA hydratase/iso 98.7 6.3E-09 2.2E-13 100.4 4.3 73 1-109 159-231 (232)
191 1pjh_A Enoyl-COA isomerase; EC 98.7 9.3E-09 3.2E-13 102.2 4.5 86 1-134 177-268 (280)
192 1bg6_A N-(1-D-carboxylethyl)-L 98.7 7.4E-08 2.5E-12 99.0 11.0 104 147-262 4-109 (359)
193 3njd_A Enoyl-COA hydratase; ss 98.6 3.9E-08 1.3E-12 100.0 8.0 94 1-134 218-324 (333)
194 3r6h_A Enoyl-COA hydratase, EC 98.6 7.4E-09 2.5E-13 100.0 2.4 74 1-110 159-232 (233)
195 3nep_X Malate dehydrogenase; h 98.6 1.6E-07 5.6E-12 94.3 10.4 108 148-270 1-124 (314)
196 4aj2_A L-lactate dehydrogenase 98.5 1.3E-07 4.3E-12 95.7 8.7 111 145-271 17-143 (331)
197 3fef_A Putative glucosidase LP 98.5 1.5E-07 5.2E-12 98.8 9.3 72 148-235 6-84 (450)
198 1u8x_X Maltose-6'-phosphate gl 98.5 2.9E-07 1E-11 97.5 11.5 121 148-283 29-193 (472)
199 3gvx_A Glycerate dehydrogenase 98.5 6.8E-08 2.3E-12 96.0 5.4 124 148-300 123-255 (290)
200 1szo_A 6-oxocamphor hydrolase; 98.5 4.6E-08 1.6E-12 95.8 3.7 83 1-130 172-254 (257)
201 4fgw_A Glycerol-3-phosphate de 98.5 2.8E-08 9.6E-13 102.4 2.3 109 148-265 35-154 (391)
202 3pqe_A L-LDH, L-lactate dehydr 98.5 4.3E-07 1.5E-11 91.8 10.9 110 146-273 4-131 (326)
203 4dgs_A Dehydrogenase; structur 98.5 1.1E-07 3.7E-12 96.6 6.3 111 148-287 172-286 (340)
204 1ygy_A PGDH, D-3-phosphoglycer 98.4 2.4E-07 8.3E-12 100.1 8.1 148 148-321 143-307 (529)
205 1gdh_A D-glycerate dehydrogena 98.4 5.2E-07 1.8E-11 91.2 10.0 114 148-286 147-265 (320)
206 3ego_A Probable 2-dehydropanto 98.4 1.6E-06 5.4E-11 87.2 12.5 116 148-282 3-119 (307)
207 4g2n_A D-isomer specific 2-hyd 98.4 4.1E-07 1.4E-11 92.5 8.1 114 148-287 174-291 (345)
208 3g17_A Similar to 2-dehydropan 98.4 1.2E-07 4.3E-12 94.7 3.9 162 148-338 3-172 (294)
209 2x0j_A Malate dehydrogenase; o 98.4 2E-06 7E-11 85.3 12.0 98 148-257 1-114 (294)
210 2dpo_A L-gulonate 3-dehydrogen 98.4 3.8E-07 1.3E-11 92.1 6.7 80 458-543 190-281 (319)
211 3t3w_A Enoyl-COA hydratase; ss 98.4 1.2E-07 4E-12 94.1 2.9 72 1-108 179-251 (279)
212 3d0o_A L-LDH 1, L-lactate dehy 98.3 4.4E-06 1.5E-10 84.3 14.0 111 147-273 6-132 (317)
213 1wwk_A Phosphoglycerate dehydr 98.3 4.8E-07 1.6E-11 90.9 6.7 114 148-287 143-260 (307)
214 2g76_A 3-PGDH, D-3-phosphoglyc 98.3 5E-07 1.7E-11 91.7 6.8 114 148-287 166-283 (335)
215 1qp8_A Formate dehydrogenase; 98.3 8.9E-07 3E-11 88.7 8.5 109 148-286 125-237 (303)
216 1s6y_A 6-phospho-beta-glucosid 98.3 1.9E-06 6.4E-11 90.9 11.2 121 148-283 8-174 (450)
217 3fi9_A Malate dehydrogenase; s 98.3 8.2E-07 2.8E-11 90.2 7.8 95 147-256 8-120 (343)
218 3gg9_A D-3-phosphoglycerate de 98.3 9.1E-07 3.1E-11 90.3 8.1 115 148-287 161-279 (352)
219 3jtm_A Formate dehydrogenase, 98.3 1.1E-06 3.6E-11 89.8 8.4 104 148-275 165-271 (351)
220 3evt_A Phosphoglycerate dehydr 98.3 1.2E-06 4.1E-11 88.4 8.7 114 148-287 138-255 (324)
221 3vku_A L-LDH, L-lactate dehydr 98.3 1.7E-06 5.9E-11 87.2 9.8 108 147-272 9-133 (326)
222 2ekl_A D-3-phosphoglycerate de 98.3 7.4E-07 2.5E-11 89.7 6.4 114 148-287 143-260 (313)
223 3k5p_A D-3-phosphoglycerate de 98.2 1.8E-06 6.3E-11 89.5 8.5 100 148-275 157-259 (416)
224 3llv_A Exopolyphosphatase-rela 98.2 1.4E-05 4.7E-10 70.2 12.7 101 147-270 6-112 (141)
225 3pp8_A Glyoxylate/hydroxypyruv 98.2 7.9E-07 2.7E-11 89.4 5.0 114 148-287 140-257 (315)
226 3hg7_A D-isomer specific 2-hyd 98.2 9E-07 3.1E-11 89.2 5.4 114 148-287 141-258 (324)
227 1y6j_A L-lactate dehydrogenase 98.2 8E-06 2.8E-10 82.4 12.3 118 147-283 7-147 (318)
228 4hy3_A Phosphoglycerate oxidor 98.2 2.3E-06 7.9E-11 87.5 8.3 114 148-287 177-293 (365)
229 2cuk_A Glycerate dehydrogenase 98.2 5.8E-07 2E-11 90.4 3.7 109 148-287 145-256 (311)
230 1ez4_A Lactate dehydrogenase; 98.2 1.1E-05 3.6E-10 81.4 12.9 108 148-273 6-130 (318)
231 2zqz_A L-LDH, L-lactate dehydr 98.2 1.2E-05 4.2E-10 81.2 13.1 109 147-273 9-134 (326)
232 1mx3_A CTBP1, C-terminal bindi 98.2 3E-06 1E-10 86.4 8.6 103 148-275 169-274 (347)
233 2xxj_A L-LDH, L-lactate dehydr 98.2 1.2E-05 4E-10 80.8 12.7 119 148-283 1-140 (310)
234 2pi1_A D-lactate dehydrogenase 98.2 1.6E-06 5.4E-11 88.0 6.2 113 148-287 142-258 (334)
235 2nac_A NAD-dependent formate d 98.1 1.6E-06 5.5E-11 89.6 5.7 116 148-287 192-311 (393)
236 2i99_A MU-crystallin homolog; 98.1 3.5E-06 1.2E-10 84.8 7.3 89 148-263 136-227 (312)
237 1sc6_A PGDH, D-3-phosphoglycer 98.1 3.5E-06 1.2E-10 87.6 7.4 100 148-275 146-248 (404)
238 1lss_A TRK system potassium up 98.1 3.8E-05 1.3E-09 66.8 13.0 93 148-262 5-103 (140)
239 4e5n_A Thermostable phosphite 98.1 1.1E-06 3.6E-11 89.2 2.9 103 148-275 146-251 (330)
240 1j4a_A D-LDH, D-lactate dehydr 98.1 4.1E-06 1.4E-10 85.0 6.8 113 148-287 147-263 (333)
241 2yq5_A D-isomer specific 2-hyd 98.1 3.5E-06 1.2E-10 85.6 6.2 112 148-287 149-264 (343)
242 2j6i_A Formate dehydrogenase; 98.0 2.3E-06 8E-11 87.8 4.3 116 148-287 165-285 (364)
243 3oj0_A Glutr, glutamyl-tRNA re 98.0 4.5E-06 1.5E-10 73.9 4.8 69 148-237 22-91 (144)
244 3oet_A Erythronate-4-phosphate 98.0 3.4E-06 1.1E-10 86.5 4.2 111 148-287 120-238 (381)
245 2o4c_A Erythronate-4-phosphate 98.0 4.7E-06 1.6E-10 85.6 4.7 111 148-287 117-235 (380)
246 1o6z_A MDH, malate dehydrogena 97.9 9.9E-05 3.4E-09 73.8 14.2 119 148-283 1-143 (303)
247 2hk9_A Shikimate dehydrogenase 97.9 1.5E-05 5.2E-10 78.7 7.5 91 148-263 130-222 (275)
248 3fwz_A Inner membrane protein 97.9 0.0001 3.5E-09 64.7 11.8 91 148-260 8-104 (140)
249 3ic5_A Putative saccharopine d 97.9 6.2E-05 2.1E-09 63.4 9.4 39 147-185 5-44 (118)
250 1mld_A Malate dehydrogenase; o 97.9 6E-05 2.1E-09 75.8 10.7 102 148-270 1-123 (314)
251 1dxy_A D-2-hydroxyisocaproate 97.8 7.8E-06 2.7E-10 83.0 4.0 112 148-287 146-261 (333)
252 2g1u_A Hypothetical protein TM 97.8 9.7E-05 3.3E-09 66.0 10.5 38 148-185 20-57 (155)
253 1smk_A Malate dehydrogenase, g 97.8 7.6E-05 2.6E-09 75.5 10.8 102 147-269 8-130 (326)
254 3c85_A Putative glutathione-re 97.8 0.00015 5.2E-09 66.5 11.9 90 148-259 40-137 (183)
255 2hmt_A YUAA protein; RCK, KTN, 97.8 0.00013 4.3E-09 63.7 10.9 39 147-185 6-44 (144)
256 1xdw_A NAD+-dependent (R)-2-hy 97.8 7.6E-06 2.6E-10 83.0 3.1 112 148-287 147-262 (331)
257 1up7_A 6-phospho-beta-glucosid 97.8 0.00012 4.2E-09 76.2 11.8 73 147-234 2-81 (417)
258 1y81_A Conserved hypothetical 97.8 8.5E-05 2.9E-09 65.2 8.8 94 146-273 13-111 (138)
259 2d5c_A AROE, shikimate 5-dehyd 97.7 0.0001 3.5E-09 72.1 9.5 66 149-238 118-183 (263)
260 1b8p_A Protein (malate dehydro 97.7 0.00012 4.2E-09 74.1 9.9 110 148-273 6-142 (329)
261 2rir_A Dipicolinate synthase, 97.7 7.3E-05 2.5E-09 74.7 8.1 87 148-261 158-245 (300)
262 3d4o_A Dipicolinate synthase s 97.7 0.00015 5E-09 72.3 10.2 87 148-261 156-243 (293)
263 2w3p_A Benzoyl-COA-dihydrodiol 97.7 1.3E-06 4.5E-11 92.2 -5.3 120 1-133 198-329 (556)
264 2duw_A Putative COA-binding pr 97.6 9.9E-05 3.4E-09 65.3 6.8 101 148-282 14-122 (145)
265 3u95_A Glycoside hydrolase, fa 97.6 0.00015 5E-09 77.0 9.1 75 148-234 1-84 (477)
266 3l4b_C TRKA K+ channel protien 97.6 0.00063 2.2E-08 64.3 12.5 91 148-260 1-98 (218)
267 1v8b_A Adenosylhomocysteinase; 97.5 7.9E-05 2.7E-09 78.6 5.6 96 148-272 258-357 (479)
268 1hye_A L-lactate/malate dehydr 97.5 0.00052 1.8E-08 68.9 11.3 110 148-273 1-131 (313)
269 3hhp_A Malate dehydrogenase; M 97.5 0.0002 6.9E-09 71.7 8.2 103 148-270 1-124 (312)
270 3u62_A Shikimate dehydrogenase 97.5 2.8E-05 9.7E-10 75.6 1.9 97 149-271 110-208 (253)
271 3d64_A Adenosylhomocysteinase; 97.4 0.00013 4.4E-09 77.3 6.3 88 148-264 278-366 (494)
272 3ce6_A Adenosylhomocysteinase; 97.4 0.00031 1.1E-08 74.5 9.0 87 148-263 275-362 (494)
273 1x7d_A Ornithine cyclodeaminas 97.4 0.00022 7.4E-09 72.7 7.3 94 148-263 130-227 (350)
274 3qy9_A DHPR, dihydrodipicolina 97.4 0.0015 5.1E-08 62.8 12.7 88 147-270 3-91 (243)
275 2dc1_A L-aspartate dehydrogena 97.3 0.00013 4.3E-09 70.2 4.5 77 148-261 1-80 (236)
276 1omo_A Alanine dehydrogenase; 97.3 0.00043 1.5E-08 69.7 8.3 70 148-237 126-198 (322)
277 3o8q_A Shikimate 5-dehydrogena 97.3 0.00018 6.1E-09 71.0 5.2 71 148-238 127-199 (281)
278 3phh_A Shikimate dehydrogenase 97.3 0.00042 1.4E-08 67.7 7.4 66 148-238 119-184 (269)
279 3p2y_A Alanine dehydrogenase/p 97.3 0.00017 5.8E-09 73.8 4.6 107 148-262 185-302 (381)
280 4dio_A NAD(P) transhydrogenase 97.2 0.00015 5.3E-09 74.7 4.1 39 148-186 191-229 (405)
281 2egg_A AROE, shikimate 5-dehyd 97.2 0.00036 1.2E-08 69.5 6.6 39 148-186 142-181 (297)
282 2vhw_A Alanine dehydrogenase; 97.2 0.00039 1.3E-08 71.7 7.0 96 148-262 169-268 (377)
283 3hdj_A Probable ornithine cycl 97.2 0.00053 1.8E-08 68.8 7.4 92 147-264 121-215 (313)
284 3h9u_A Adenosylhomocysteinase; 97.2 0.00042 1.4E-08 71.8 6.5 85 148-261 212-297 (436)
285 1id1_A Putative potassium chan 97.2 0.0019 6.5E-08 57.3 10.1 38 148-185 4-42 (153)
286 1tlt_A Putative oxidoreductase 97.2 0.00096 3.3E-08 67.0 9.0 95 147-269 5-104 (319)
287 4h7p_A Malate dehydrogenase; s 97.2 0.0011 3.9E-08 67.0 9.4 101 148-260 25-148 (345)
288 2eez_A Alanine dehydrogenase; 97.2 0.00079 2.7E-08 69.2 8.4 94 148-262 167-266 (369)
289 3euw_A MYO-inositol dehydrogen 97.1 0.0023 8E-08 64.9 11.6 96 147-269 4-104 (344)
290 3uuw_A Putative oxidoreductase 97.1 0.0015 5E-08 65.3 9.9 95 147-269 6-105 (308)
291 3q2i_A Dehydrogenase; rossmann 97.1 0.0031 1E-07 64.3 12.3 71 146-239 12-88 (354)
292 3ulk_A Ketol-acid reductoisome 97.1 0.001 3.4E-08 68.4 8.4 151 148-321 38-201 (491)
293 3kb6_A D-lactate dehydrogenase 97.1 0.00049 1.7E-08 69.6 6.2 112 148-287 142-258 (334)
294 3dfz_A SIRC, precorrin-2 dehyd 97.1 0.0029 9.8E-08 59.9 11.0 130 148-317 32-163 (223)
295 1p77_A Shikimate 5-dehydrogena 97.1 0.00046 1.6E-08 67.8 5.5 71 148-238 120-192 (272)
296 2ho3_A Oxidoreductase, GFO/IDH 97.1 0.0017 5.8E-08 65.4 9.8 95 148-269 2-101 (325)
297 1npy_A Hypothetical shikimate 97.1 0.0015 5.2E-08 64.0 9.1 67 148-238 120-187 (271)
298 2z2v_A Hypothetical protein PH 97.0 0.0011 3.8E-08 67.9 8.2 90 147-262 16-108 (365)
299 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0016 5.3E-08 65.6 9.1 96 148-269 3-102 (323)
300 3gvp_A Adenosylhomocysteinase 97.0 0.0017 5.8E-08 67.2 9.3 85 148-261 221-306 (435)
301 3n58_A Adenosylhomocysteinase; 97.0 0.0016 5.5E-08 67.5 9.1 87 148-264 248-335 (464)
302 3jyo_A Quinate/shikimate dehyd 97.0 0.0013 4.3E-08 65.0 8.0 41 148-188 128-169 (283)
303 5mdh_A Malate dehydrogenase; o 97.0 0.00059 2E-08 68.9 5.7 109 148-272 4-137 (333)
304 1nyt_A Shikimate 5-dehydrogena 97.0 0.0018 6E-08 63.5 8.7 39 148-186 120-158 (271)
305 3e9m_A Oxidoreductase, GFO/IDH 97.0 0.0024 8.2E-08 64.5 9.7 96 147-269 5-106 (330)
306 3db2_A Putative NADPH-dependen 96.9 0.0033 1.1E-07 64.0 10.7 96 147-270 5-106 (354)
307 3cea_A MYO-inositol 2-dehydrog 96.9 0.0031 1E-07 64.0 10.4 97 146-269 7-110 (346)
308 4hkt_A Inositol 2-dehydrogenas 96.9 0.0033 1.1E-07 63.3 10.6 96 147-270 3-103 (331)
309 1leh_A Leucine dehydrogenase; 96.9 0.0024 8.1E-08 65.2 9.1 38 148-185 174-211 (364)
310 1gpj_A Glutamyl-tRNA reductase 96.8 0.0019 6.6E-08 67.1 8.0 70 148-238 168-239 (404)
311 3ezy_A Dehydrogenase; structur 96.8 0.0037 1.3E-07 63.4 9.9 95 148-269 3-103 (344)
312 3c1a_A Putative oxidoreductase 96.8 0.002 6.9E-08 64.5 7.8 93 147-269 10-108 (315)
313 3pwz_A Shikimate dehydrogenase 96.8 0.0025 8.4E-08 62.5 8.2 39 148-186 121-160 (272)
314 1jw9_B Molybdopterin biosynthe 96.8 0.00095 3.3E-08 64.6 5.0 33 148-180 32-65 (249)
315 3l9w_A Glutathione-regulated p 96.8 0.0075 2.6E-07 62.7 11.9 91 148-260 5-101 (413)
316 3don_A Shikimate dehydrogenase 96.8 0.00031 1.1E-08 69.1 1.0 37 148-184 118-155 (277)
317 3rc1_A Sugar 3-ketoreductase; 96.7 0.0061 2.1E-07 62.0 10.5 97 145-269 25-128 (350)
318 2glx_A 1,5-anhydro-D-fructose 96.7 0.0035 1.2E-07 63.1 8.7 94 149-269 2-101 (332)
319 3upl_A Oxidoreductase; rossman 96.7 0.0078 2.7E-07 62.8 11.1 152 148-326 24-190 (446)
320 3ond_A Adenosylhomocysteinase; 96.7 0.0043 1.5E-07 65.3 9.2 86 148-262 266-352 (488)
321 1nvt_A Shikimate 5'-dehydrogen 96.7 0.0041 1.4E-07 61.4 8.7 76 148-237 129-204 (287)
322 3fbt_A Chorismate mutase and s 96.7 0.0015 5.2E-08 64.2 5.2 38 148-185 123-161 (282)
323 3h2s_A Putative NADH-flavin re 96.7 0.00096 3.3E-08 62.8 3.7 38 148-185 1-39 (224)
324 3tum_A Shikimate dehydrogenase 96.7 0.0054 1.8E-07 59.9 9.1 72 148-237 126-198 (269)
325 1pjc_A Protein (L-alanine dehy 96.6 0.0017 5.9E-08 66.4 5.7 97 148-262 168-267 (361)
326 4g65_A TRK system potassium up 96.6 0.0062 2.1E-07 64.4 9.9 39 148-186 4-42 (461)
327 2d59_A Hypothetical protein PH 96.6 0.0084 2.9E-07 52.7 9.1 101 148-282 23-129 (144)
328 3abi_A Putative uncharacterize 96.6 0.0023 8E-08 65.5 6.2 68 148-238 17-89 (365)
329 1iuk_A Hypothetical protein TT 96.6 0.003 1E-07 55.3 6.0 103 148-282 14-122 (140)
330 7mdh_A Protein (malate dehydro 96.6 0.0052 1.8E-07 62.7 8.5 113 147-271 32-165 (375)
331 3tnl_A Shikimate dehydrogenase 96.5 0.0054 1.8E-07 61.3 8.2 39 148-186 155-197 (315)
332 3mz0_A Inositol 2-dehydrogenas 96.5 0.012 4.3E-07 59.4 11.1 96 148-269 3-105 (344)
333 3ius_A Uncharacterized conserv 96.5 0.008 2.7E-07 58.8 9.3 39 147-185 5-43 (286)
334 3ec7_A Putative dehydrogenase; 96.5 0.013 4.6E-07 59.6 11.1 98 146-269 22-126 (357)
335 3t4e_A Quinate/shikimate dehyd 96.5 0.005 1.7E-07 61.4 7.6 39 148-186 149-191 (312)
336 3r6d_A NAD-dependent epimerase 96.4 0.011 3.9E-07 55.4 9.7 39 147-185 5-46 (221)
337 3bio_A Oxidoreductase, GFO/IDH 96.4 0.011 3.6E-07 59.0 9.6 68 147-239 9-78 (304)
338 1x13_A NAD(P) transhydrogenase 96.4 0.0021 7.3E-08 66.7 4.5 39 148-186 173-211 (401)
339 3e18_A Oxidoreductase; dehydro 96.4 0.014 4.9E-07 59.4 10.7 94 147-269 5-104 (359)
340 3ew7_A LMO0794 protein; Q8Y8U8 96.3 0.0028 9.4E-08 59.4 4.7 37 148-184 1-38 (221)
341 1f06_A MESO-diaminopimelate D- 96.3 0.004 1.4E-07 62.6 5.9 91 148-270 4-98 (320)
342 4ina_A Saccharopine dehydrogen 96.3 0.0054 1.9E-07 63.7 7.0 41 147-187 1-44 (405)
343 4f3y_A DHPR, dihydrodipicolina 96.2 0.0024 8.2E-08 62.5 3.5 101 146-268 6-110 (272)
344 1ydw_A AX110P-like protein; st 96.2 0.021 7.1E-07 58.2 10.8 99 147-269 6-110 (362)
345 3m2t_A Probable dehydrogenase; 96.1 0.011 3.8E-07 60.3 8.2 96 147-269 5-107 (359)
346 1l7d_A Nicotinamide nucleotide 96.1 0.0042 1.4E-07 64.1 4.9 39 148-186 173-211 (384)
347 1ff9_A Saccharopine reductase; 96.0 0.0086 2.9E-07 63.1 7.0 39 147-185 3-41 (450)
348 2aef_A Calcium-gated potassium 96.0 0.023 7.9E-07 53.9 9.5 92 147-263 9-107 (234)
349 3evn_A Oxidoreductase, GFO/IDH 96.0 0.0076 2.6E-07 60.6 6.3 97 146-269 4-106 (329)
350 2p2s_A Putative oxidoreductase 96.0 0.012 4.2E-07 59.3 7.7 96 147-269 4-105 (336)
351 2axq_A Saccharopine dehydrogen 96.0 0.011 3.9E-07 62.4 7.7 40 146-185 22-62 (467)
352 1h6d_A Precursor form of gluco 95.9 0.02 6.8E-07 60.0 9.2 102 145-269 81-189 (433)
353 3ohs_X Trans-1,2-dihydrobenzen 95.9 0.034 1.1E-06 56.0 10.4 95 148-269 3-105 (334)
354 4had_A Probable oxidoreductase 95.9 0.018 6.1E-07 58.4 8.4 74 145-240 21-100 (350)
355 1dih_A Dihydrodipicolinate red 95.8 0.0065 2.2E-07 59.5 4.7 35 147-181 5-42 (273)
356 1zud_1 Adenylyltransferase THI 95.8 0.0082 2.8E-07 58.0 5.3 33 148-180 29-62 (251)
357 3e8x_A Putative NAD-dependent 95.7 0.019 6.5E-07 54.4 7.5 38 148-185 22-60 (236)
358 4a26_A Putative C-1-tetrahydro 95.7 0.0084 2.9E-07 58.9 5.0 74 148-263 166-240 (300)
359 3qvo_A NMRA family protein; st 95.7 0.0055 1.9E-07 58.3 3.7 40 144-183 20-61 (236)
360 2b0j_A 5,10-methenyltetrahydro 95.7 0.16 5.5E-06 48.8 13.5 109 215-326 129-242 (358)
361 3h8v_A Ubiquitin-like modifier 95.7 0.0088 3E-07 59.0 5.1 33 148-180 37-70 (292)
362 3dhn_A NAD-dependent epimerase 95.7 0.019 6.4E-07 53.9 7.2 37 147-183 4-41 (227)
363 3ngx_A Bifunctional protein fo 95.7 0.0058 2E-07 59.3 3.6 72 148-263 151-223 (276)
364 1y7t_A Malate dehydrogenase; N 95.6 0.024 8.2E-07 56.9 8.1 33 148-180 5-45 (327)
365 1a4i_A Methylenetetrahydrofola 95.5 0.012 4.3E-07 57.7 5.4 71 148-263 166-238 (301)
366 1p9l_A Dihydrodipicolinate red 95.5 0.035 1.2E-06 53.2 8.3 31 149-179 2-35 (245)
367 3moi_A Probable dehydrogenase; 95.5 0.053 1.8E-06 55.8 10.2 94 148-269 3-103 (387)
368 1lu9_A Methylene tetrahydromet 95.4 0.021 7.2E-07 56.2 6.8 40 148-187 120-160 (287)
369 1edz_A 5,10-methylenetetrahydr 95.4 0.011 3.8E-07 58.9 4.6 91 148-265 178-278 (320)
370 3fpf_A Mtnas, putative unchara 95.4 0.12 4.2E-06 50.8 12.1 95 148-262 124-222 (298)
371 3eag_A UDP-N-acetylmuramate:L- 95.4 0.023 7.8E-07 57.1 7.0 34 147-180 4-38 (326)
372 3e82_A Putative oxidoreductase 95.4 0.027 9.2E-07 57.5 7.6 69 147-240 7-81 (364)
373 4b4o_A Epimerase family protei 95.3 0.031 1E-06 55.0 7.4 34 148-181 1-35 (298)
374 1kyq_A Met8P, siroheme biosynt 95.3 0.068 2.3E-06 52.1 9.6 33 148-180 14-46 (274)
375 3gdo_A Uncharacterized oxidore 95.3 0.03 1E-06 56.9 7.5 69 147-240 5-79 (358)
376 2yyy_A Glyceraldehyde-3-phosph 95.3 0.1 3.6E-06 52.6 11.3 107 148-264 3-115 (343)
377 3p2o_A Bifunctional protein fo 95.2 0.015 5.2E-07 56.7 4.7 72 148-263 161-233 (285)
378 3kkj_A Amine oxidase, flavin-c 95.2 0.011 3.9E-07 55.8 3.9 32 149-180 4-35 (336)
379 2ixa_A Alpha-N-acetylgalactosa 95.2 0.048 1.6E-06 57.2 8.8 76 147-239 20-104 (444)
380 3l07_A Bifunctional protein fo 95.1 0.017 5.8E-07 56.3 4.7 72 148-263 162-234 (285)
381 1b0a_A Protein (fold bifunctio 95.1 0.011 3.6E-07 57.8 3.2 72 148-263 160-232 (288)
382 3h5n_A MCCB protein; ubiquitin 95.0 0.035 1.2E-06 56.4 7.1 33 148-180 119-152 (353)
383 3dqp_A Oxidoreductase YLBE; al 95.0 0.098 3.3E-06 48.7 9.7 36 148-183 1-37 (219)
384 4hv4_A UDP-N-acetylmuramate--L 95.0 0.1 3.5E-06 55.5 10.8 76 145-241 20-99 (494)
385 4hb9_A Similarities with proba 94.9 0.014 4.7E-07 60.0 3.8 34 148-181 2-35 (412)
386 1zh8_A Oxidoreductase; TM0312, 94.9 0.038 1.3E-06 55.8 6.9 71 147-239 18-95 (340)
387 3u3x_A Oxidoreductase; structu 94.9 0.052 1.8E-06 55.3 7.9 95 148-269 27-127 (361)
388 4a5o_A Bifunctional protein fo 94.8 0.02 6.8E-07 55.8 4.3 72 148-263 162-234 (286)
389 3l77_A Short-chain alcohol deh 94.8 0.055 1.9E-06 51.1 7.4 41 148-188 3-44 (235)
390 3ijp_A DHPR, dihydrodipicolina 94.8 0.023 7.9E-07 55.8 4.7 98 147-266 21-123 (288)
391 3l6e_A Oxidoreductase, short-c 94.7 0.027 9.3E-07 53.6 5.1 40 148-187 4-44 (235)
392 3dty_A Oxidoreductase, GFO/IDH 94.7 0.047 1.6E-06 56.4 7.2 74 147-240 12-99 (398)
393 3f1l_A Uncharacterized oxidore 94.7 0.052 1.8E-06 52.1 6.9 43 148-190 13-56 (252)
394 4gqa_A NAD binding oxidoreduct 94.6 0.046 1.6E-06 56.7 6.9 71 148-240 27-110 (412)
395 2c2x_A Methylenetetrahydrofola 94.6 0.018 6E-07 56.1 3.3 71 148-262 159-232 (281)
396 3kux_A Putative oxidoreductase 94.6 0.05 1.7E-06 55.1 6.9 68 148-240 8-81 (352)
397 3dr3_A N-acetyl-gamma-glutamyl 94.6 0.06 2.1E-06 54.1 7.4 100 147-267 4-111 (337)
398 1y1p_A ARII, aldehyde reductas 94.6 0.12 4.2E-06 51.3 9.8 39 147-185 11-50 (342)
399 1pjq_A CYSG, siroheme synthase 94.6 0.15 5.2E-06 53.6 10.8 131 148-317 13-145 (457)
400 3ai3_A NADPH-sorbose reductase 94.5 0.05 1.7E-06 52.5 6.5 41 148-188 8-49 (263)
401 3ing_A Homoserine dehydrogenas 94.5 0.021 7.3E-07 57.2 3.8 35 147-181 4-46 (325)
402 3fhl_A Putative oxidoreductase 94.5 0.024 8.1E-07 57.9 4.1 69 146-239 4-78 (362)
403 3do5_A HOM, homoserine dehydro 94.5 0.025 8.5E-07 56.8 4.1 196 147-385 2-217 (327)
404 4dry_A 3-oxoacyl-[acyl-carrier 94.4 0.047 1.6E-06 53.5 6.0 41 148-188 34-75 (281)
405 2vt3_A REX, redox-sensing tran 94.4 0.014 4.7E-07 54.9 2.0 77 148-249 86-166 (215)
406 1cf2_P Protein (glyceraldehyde 94.3 0.056 1.9E-06 54.5 6.5 36 148-183 2-39 (337)
407 1y8q_B Anthracycline-, ubiquit 94.3 0.023 8E-07 61.8 3.8 33 148-180 18-51 (640)
408 2wsb_A Galactitol dehydrogenas 94.3 0.031 1.1E-06 53.4 4.4 39 148-186 12-51 (254)
409 1vl6_A Malate oxidoreductase; 94.3 0.036 1.2E-06 56.4 4.8 32 148-179 193-225 (388)
410 1vl8_A Gluconate 5-dehydrogena 94.2 0.063 2.2E-06 52.0 6.5 40 148-187 22-62 (267)
411 3f4l_A Putative oxidoreductase 94.2 0.023 7.8E-07 57.5 3.3 70 148-240 3-79 (345)
412 2ejw_A HDH, homoserine dehydro 94.2 0.059 2E-06 54.1 6.2 64 148-237 4-77 (332)
413 2z1n_A Dehydrogenase; reductas 94.2 0.058 2E-06 51.9 6.0 40 148-187 8-48 (260)
414 3btv_A Galactose/lactose metab 94.2 0.078 2.7E-06 55.5 7.4 73 147-239 20-102 (438)
415 2pnf_A 3-oxoacyl-[acyl-carrier 94.1 0.061 2.1E-06 51.1 6.0 39 148-186 8-47 (248)
416 3m2p_A UDP-N-acetylglucosamine 94.1 0.21 7.2E-06 49.1 10.2 35 147-181 2-37 (311)
417 2gas_A Isoflavone reductase; N 94.1 0.052 1.8E-06 53.4 5.6 34 147-180 2-36 (307)
418 3c1o_A Eugenol synthase; pheny 94.1 0.064 2.2E-06 53.2 6.3 34 147-180 4-38 (321)
419 3v5n_A Oxidoreductase; structu 94.1 0.16 5.4E-06 52.8 9.5 98 147-269 37-149 (417)
420 2nvw_A Galactose/lactose metab 94.1 0.087 3E-06 55.8 7.6 73 147-239 39-121 (479)
421 3e5r_O PP38, glyceraldehyde-3- 94.0 0.1 3.5E-06 52.5 7.7 148 148-320 4-172 (337)
422 1xg5_A ARPG836; short chain de 94.0 0.05 1.7E-06 53.0 5.3 39 148-186 33-72 (279)
423 3lf2_A Short chain oxidoreduct 94.0 0.074 2.5E-06 51.4 6.4 43 148-190 9-52 (265)
424 3lk7_A UDP-N-acetylmuramoylala 94.0 0.2 6.7E-06 52.6 10.2 35 147-181 9-43 (451)
425 3nyw_A Putative oxidoreductase 94.0 0.044 1.5E-06 52.6 4.8 42 148-189 8-50 (250)
426 3i6i_A Putative leucoanthocyan 94.0 0.21 7E-06 50.1 10.0 34 147-180 10-44 (346)
427 1w6u_A 2,4-dienoyl-COA reducta 94.0 0.083 2.9E-06 51.9 6.9 41 148-188 27-68 (302)
428 3oh8_A Nucleoside-diphosphate 94.0 0.098 3.4E-06 55.9 7.9 36 147-182 147-183 (516)
429 1nff_A Putative oxidoreductase 93.9 0.041 1.4E-06 53.2 4.4 38 148-185 8-46 (260)
430 4gmf_A Yersiniabactin biosynth 93.9 0.056 1.9E-06 55.3 5.6 67 148-238 8-78 (372)
431 1nvm_B Acetaldehyde dehydrogen 93.9 0.13 4.3E-06 51.3 8.0 35 148-182 5-42 (312)
432 3ruf_A WBGU; rossmann fold, UD 93.9 0.095 3.3E-06 52.6 7.2 35 147-181 25-60 (351)
433 3asu_A Short-chain dehydrogena 93.9 0.068 2.3E-06 51.2 5.8 38 149-186 2-40 (248)
434 1c0p_A D-amino acid oxidase; a 93.8 0.052 1.8E-06 55.0 5.1 33 148-180 7-39 (363)
435 3ioy_A Short-chain dehydrogena 93.8 0.062 2.1E-06 53.7 5.6 42 148-189 9-51 (319)
436 1geg_A Acetoin reductase; SDR 93.8 0.064 2.2E-06 51.5 5.5 40 148-187 3-43 (256)
437 4fc7_A Peroxisomal 2,4-dienoyl 93.8 0.084 2.9E-06 51.4 6.4 42 148-189 28-70 (277)
438 3oz2_A Digeranylgeranylglycero 93.8 0.033 1.1E-06 56.6 3.5 33 149-181 6-38 (397)
439 2nwq_A Probable short-chain de 93.8 0.065 2.2E-06 52.2 5.5 39 148-186 22-61 (272)
440 2jl1_A Triphenylmethane reduct 93.8 0.11 3.8E-06 50.4 7.3 37 148-184 1-40 (287)
441 2ehd_A Oxidoreductase, oxidore 93.8 0.039 1.3E-06 52.1 3.8 38 148-185 6-44 (234)
442 4dgk_A Phytoene dehydrogenase; 93.7 0.033 1.1E-06 59.1 3.6 35 147-181 1-35 (501)
443 2rhc_B Actinorhodin polyketide 93.7 0.068 2.3E-06 52.1 5.6 40 148-187 23-63 (277)
444 1qyc_A Phenylcoumaran benzylic 93.7 0.15 5.2E-06 50.0 8.2 34 147-180 4-38 (308)
445 1yde_A Retinal dehydrogenase/r 93.7 0.045 1.5E-06 53.2 4.1 38 148-185 10-48 (270)
446 3op4_A 3-oxoacyl-[acyl-carrier 93.7 0.048 1.6E-06 52.2 4.3 39 148-186 10-49 (248)
447 2r6j_A Eugenol synthase 1; phe 93.7 0.05 1.7E-06 53.9 4.6 34 148-181 12-46 (318)
448 4fn4_A Short chain dehydrogena 93.6 0.1 3.6E-06 50.3 6.6 40 149-188 8-49 (254)
449 4fb5_A Probable oxidoreductase 93.6 0.095 3.3E-06 53.5 6.8 70 149-240 27-108 (393)
450 3qj4_A Renalase; FAD/NAD(P)-bi 93.6 0.04 1.4E-06 55.4 3.8 34 147-180 1-37 (342)
451 1yvv_A Amine oxidase, flavin-c 93.6 0.041 1.4E-06 54.8 3.9 33 148-180 3-35 (336)
452 4fgs_A Probable dehydrogenase 93.6 0.36 1.2E-05 47.0 10.5 39 149-187 30-70 (273)
453 2ywl_A Thioredoxin reductase r 93.6 0.053 1.8E-06 48.8 4.3 33 148-180 2-34 (180)
454 1xu9_A Corticosteroid 11-beta- 93.6 0.068 2.3E-06 52.3 5.4 40 148-187 29-69 (286)
455 4egf_A L-xylulose reductase; s 93.6 0.065 2.2E-06 51.9 5.2 43 148-190 21-64 (266)
456 1uls_A Putative 3-oxoacyl-acyl 93.6 0.053 1.8E-06 51.8 4.4 38 148-185 6-44 (245)
457 1lnq_A MTHK channels, potassiu 93.6 0.14 4.7E-06 51.4 7.8 37 147-184 115-151 (336)
458 1xhl_A Short-chain dehydrogena 93.6 0.055 1.9E-06 53.4 4.6 40 148-187 27-67 (297)
459 1qyd_A Pinoresinol-lariciresin 93.5 0.19 6.5E-06 49.4 8.5 34 147-180 4-38 (313)
460 3cxt_A Dehydrogenase with diff 93.4 0.085 2.9E-06 51.9 5.8 40 148-187 35-75 (291)
461 1b7g_O Protein (glyceraldehyde 93.4 0.16 5.6E-06 51.1 7.9 102 148-264 2-110 (340)
462 1u8f_O GAPDH, glyceraldehyde-3 93.4 0.15 5.2E-06 51.2 7.7 151 148-321 4-171 (335)
463 3rwb_A TPLDH, pyridoxal 4-dehy 93.4 0.057 1.9E-06 51.7 4.3 39 148-186 7-46 (247)
464 3gpi_A NAD-dependent epimerase 93.4 0.05 1.7E-06 53.0 4.0 36 147-182 3-38 (286)
465 3ged_A Short-chain dehydrogena 93.4 0.44 1.5E-05 45.6 10.5 37 149-185 4-41 (247)
466 3mtj_A Homoserine dehydrogenas 93.4 0.19 6.6E-06 52.3 8.6 64 148-236 11-88 (444)
467 1xkq_A Short-chain reductase f 93.4 0.053 1.8E-06 52.9 4.1 39 148-186 7-46 (280)
468 2czc_A Glyceraldehyde-3-phosph 93.4 0.15 5.2E-06 51.3 7.6 86 148-239 3-92 (334)
469 2ph3_A 3-oxoacyl-[acyl carrier 93.4 0.062 2.1E-06 50.9 4.5 39 148-186 2-42 (245)
470 4g81_D Putative hexonate dehyd 93.3 0.1 3.5E-06 50.3 5.9 42 149-190 10-53 (255)
471 3ftp_A 3-oxoacyl-[acyl-carrier 93.3 0.073 2.5E-06 51.7 5.0 40 149-188 30-70 (270)
472 2d1y_A Hypothetical protein TT 93.3 0.067 2.3E-06 51.4 4.6 35 148-182 7-42 (256)
473 3oa2_A WBPB; oxidoreductase, s 93.3 0.083 2.8E-06 52.8 5.4 70 147-239 3-86 (318)
474 3o9z_A Lipopolysaccaride biosy 93.2 0.084 2.9E-06 52.5 5.4 70 147-239 3-85 (312)
475 4h3v_A Oxidoreductase domain p 93.2 0.085 2.9E-06 53.8 5.6 70 149-240 8-89 (390)
476 2ozp_A N-acetyl-gamma-glutamyl 93.2 0.13 4.5E-06 51.9 6.9 98 147-266 4-103 (345)
477 3enk_A UDP-glucose 4-epimerase 93.2 0.12 4E-06 51.7 6.4 39 148-186 6-45 (341)
478 3rp8_A Flavoprotein monooxygen 93.1 0.06 2E-06 55.5 4.3 34 148-181 24-57 (407)
479 1x1t_A D(-)-3-hydroxybutyrate 93.1 0.089 3.1E-06 50.6 5.3 40 148-187 5-46 (260)
480 1j5p_A Aspartate dehydrogenase 93.1 0.31 1.1E-05 46.7 8.9 76 147-260 12-89 (253)
481 3st7_A Capsular polysaccharide 93.1 0.15 5E-06 51.8 7.1 31 148-178 1-33 (369)
482 3ip1_A Alcohol dehydrogenase, 93.1 0.51 1.7E-05 48.6 11.3 39 148-186 215-254 (404)
483 3e48_A Putative nucleoside-dip 93.0 0.17 5.9E-06 49.1 7.3 36 148-183 1-38 (289)
484 3ff4_A Uncharacterized protein 93.0 0.13 4.3E-06 43.6 5.4 81 147-259 4-88 (122)
485 3ihm_A Styrene monooxygenase A 93.0 0.053 1.8E-06 56.6 3.7 33 148-180 23-55 (430)
486 1c1d_A L-phenylalanine dehydro 93.0 0.23 8E-06 50.1 8.3 35 148-182 176-210 (355)
487 2bka_A CC3, TAT-interacting pr 93.0 0.18 6.2E-06 47.5 7.1 35 148-182 19-56 (242)
488 2gf3_A MSOX, monomeric sarcosi 93.0 0.068 2.3E-06 54.4 4.3 33 148-180 4-36 (389)
489 1sb8_A WBPP; epimerase, 4-epim 92.9 0.2 6.9E-06 50.3 7.9 35 147-181 27-62 (352)
490 3dme_A Conserved exported prot 92.9 0.07 2.4E-06 53.6 4.3 33 148-180 5-37 (369)
491 1ys4_A Aspartate-semialdehyde 92.9 0.13 4.5E-06 52.2 6.3 99 148-265 9-117 (354)
492 2uzz_A N-methyl-L-tryptophan o 92.9 0.058 2E-06 54.6 3.7 33 148-180 3-35 (372)
493 4g65_A TRK system potassium up 92.9 0.54 1.9E-05 49.4 11.3 41 145-186 233-273 (461)
494 3oqb_A Oxidoreductase; structu 92.8 0.096 3.3E-06 53.6 5.3 71 147-239 6-96 (383)
495 3cps_A Glyceraldehyde 3-phosph 92.8 0.29 1E-05 49.3 8.7 151 146-320 16-186 (354)
496 2zcu_A Uncharacterized oxidore 92.8 0.23 8E-06 48.0 7.9 35 149-183 1-38 (286)
497 3nrn_A Uncharacterized protein 92.8 0.068 2.3E-06 55.3 4.2 33 148-180 1-33 (421)
498 2vou_A 2,6-dihydroxypyridine h 92.8 0.076 2.6E-06 54.6 4.5 34 148-181 6-39 (397)
499 3guy_A Short-chain dehydrogena 92.8 0.13 4.6E-06 48.3 5.9 40 147-186 1-41 (230)
500 1ryi_A Glycine oxidase; flavop 92.8 0.085 2.9E-06 53.6 4.8 34 147-180 17-50 (382)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=1.8e-106 Score=899.59 Aligned_cols=543 Identities=31% Similarity=0.490 Sum_probs=478.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|+|++ +++.|.++|++++.++. ...................+..+..+.+++.+++
T Consensus 170 l~ltG~~i~a~eA~~~GLv~~vv~~d-~~~~A~~~A~~ia~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 246 (742)
T 3zwc_A 170 LITSGKYLSADEALRLGILDAVVKSD-PVEEAIKFAQKIIDKPI--EPRRIFNKPVPSLPNMDSVFAEAIAKVRKQYPGV 246 (742)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEESSC-HHHHHHHHHHHHTTSCS--GGGCGGGSCCCCCTTHHHHHHHHHHHHHHHSTTC
T ss_pred HHHcCCchhHHHHHHcCCccEecCch-hhHHHHHHHHHHhcCCc--hhhhhhcccccccchhhhhHHHHHHHHhhhccch
Confidence 57899999999999999999999876 46889999999988642 2221111222222233345555666677888899
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccCCCCC---CCCCCCccceeEEEEcCCc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT---DIGLKPRGVRKVAVIGGGL 157 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~~~~~---~~~~~~~~~~kv~ViGaG~ 157 (563)
+|+.+++++|+++...+++++++.|+++|.+|+.|+++++++++||++|+++|.+... ..+..+++|+||+|||+|+
T Consensus 247 ~A~~~~~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~ 326 (742)
T 3zwc_A 247 LAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGT 326 (742)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSH
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccH
Confidence 9999999999999999999999999999999999999999999999999988865322 2244567899999999999
Q ss_pred chHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCCCEEEEecCCC
Q 008509 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237 (563)
Q Consensus 158 mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVieav~e~ 237 (563)
||++||..++++|++|+++|++++.++++.+.+.+.+++.+.++..+.. .....++..+++++++++||+|||||||+
T Consensus 327 MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aDlVIEAV~E~ 404 (742)
T 3zwc_A 327 MGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ--ASAKPKLRFSSSTKELSTVDLVVEAVFED 404 (742)
T ss_dssp HHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCCCEEEESCGGGGGSCSEEEECCCSC
T ss_pred HHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccch--hhhhhhhcccCcHHHHhhCCEEEEecccc
Confidence 9999999999999999999999999999999999999888877655432 23456788999999999999999999999
Q ss_pred hHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 008509 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 317 (563)
Q Consensus 238 ~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~~~~~~~~~l~~~ 317 (563)
+++|+++|++|++++++++||+||||++++++|++.+.+|+||+|+|||||++.|+|||||+++.|++++++.+.++.+.
T Consensus 405 l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~ 484 (742)
T 3zwc_A 405 MNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKK 484 (742)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhcCCCccHHHHhhhhchHHHHHHHHHHHHhCCCC-
Q 008509 318 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR- 396 (563)
Q Consensus 318 lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~~~~~ID~a~~~~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~~~~- 396 (563)
+||+||+++|+|||++||++.++++||++++++|+++++||.++.++|||||||+++|.+|+|+.+++.+.++...++.
T Consensus 485 lgK~pV~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~G~pmGPf~l~D~vGlDv~~~v~~~~~~~~~~~~ 564 (742)
T 3zwc_A 485 IGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLP 564 (742)
T ss_dssp TTCEEEECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSTTSC
T ss_pred hCCCCcccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHcCCCCChHHHHHHhCHHHHHHHHHHHHhhCcccC
Confidence 9999999999999999999999999999999999999999999988999999999999999999999999876543321
Q ss_pred ----------CCchHHHHHHHHcCCCCcccCccccccCCC--CCCCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHH
Q 008509 397 ----------SFQSPLVDLLLKSGRNGKANGKGLYTYEKG--SKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVE 464 (563)
Q Consensus 397 ----------~~~~~~l~~l~~~g~~G~k~g~GFY~y~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 464 (563)
..+++++++|++.|++|+|+|+|||+|+++ +...+||++..++...+....+. ...+++++|++
T Consensus 565 ~~~~~~~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ei~~ 640 (742)
T 3zwc_A 565 PGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIE----QRTISKEEILE 640 (742)
T ss_dssp TTCCTTEETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTTCSCEECCHHHHHHHHHHHHHHTCC----CCCCCHHHHHH
T ss_pred ccchhhhcccccccHHHHHHHHCCCccccCCCeeEECCCCCCccCCCChHHHHHHHHHhhhcCCC----cCCCCHHHHHH
Confidence 114679999999999999999999999753 33467888877776655433332 23578899999
Q ss_pred HHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHHH
Q 008509 465 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEER 542 (563)
Q Consensus 465 r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~ 542 (563)
|++++++||+++|++|||+.+++|||.+|++|||||+|+||||+|+|.+|++.+++.|+.|++.+|+ +|+|+++|++|
T Consensus 641 R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~m 720 (742)
T 3zwc_A 641 RCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRL 720 (742)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 89999999999
Q ss_pred HHcCC-CccCC
Q 008509 543 ATKGI-PLSAP 552 (563)
Q Consensus 543 ~~~g~-~f~~~ 552 (563)
+++|. +||+|
T Consensus 721 a~~G~~~f~~~ 731 (742)
T 3zwc_A 721 VAQGSPPLKEW 731 (742)
T ss_dssp HHTTCCCGGGH
T ss_pred HHcCCCccccc
Confidence 99997 57877
No 2
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=6.2e-98 Score=836.50 Aligned_cols=549 Identities=57% Similarity=0.971 Sum_probs=466.2
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccc-hhccccCCCCChHHHHHHHHHHHHHHH-hhCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWI-RSLHRTDKLGSLSEAREVLKLARLQAK-KTAP 78 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 78 (563)
|+|||++++|+||+++||||+|||+++|++.|.+++++++.+..|+. ..... ............+..++...+ ++++
T Consensus 166 l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~g 244 (725)
T 2wtb_A 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKT-DKLPPLGEAREILTFAKAQTLKRAPN 244 (725)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGGCC-TTSCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhhhc-cccCccchHHHHHHHHHHHHHHhccC
Confidence 57899999999999999999999999999999999999887533442 11110 011111122236666777755 5665
Q ss_pred CChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccCCCCCCCCCCCccceeEEEEcCCcc
Q 008509 79 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLM 158 (563)
Q Consensus 79 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~~~~~~~~~~~~~~~kv~ViGaG~m 158 (563)
|||+..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||+++|.++....+..++++++|+|||+|+|
T Consensus 245 -~pA~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~~~~~~~~~~kV~VIGaG~M 323 (725)
T 2wtb_A 245 -MKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLM 323 (725)
T ss_dssp -CCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEEECCSHH
T ss_pred -CcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcchhHHHHHHHhhhhhhhcccCCCCccccccccCcEEEEEcCCHh
Confidence 9999999999999999999999999999999999999999999999999999998762211334567899999999999
Q ss_pred hHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCCCEEEEecCCCh
Q 008509 159 GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESV 238 (563)
Q Consensus 159 G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVieav~e~~ 238 (563)
|++||..++++|++|++||++++.++++.+.+++.+++++++|.++.++.+..+.+++.++|++++++||+|||||||+.
T Consensus 324 G~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIeaVpe~~ 403 (725)
T 2wtb_A 324 GSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENI 403 (725)
T ss_dssp HHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGTTCSEEEECCCSCH
T ss_pred hHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHCCCCEEEEcCcCCH
Confidence 99999999999999999999999999999999999999999999998888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHh
Q 008509 239 PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 318 (563)
Q Consensus 239 ~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~~~~~~~~~l~~~l 318 (563)
++|+.+++++.+++++++||+||||+++++++++.+.+|++++|+|||||++.|+++|+++++.|++++++.+.++++.+
T Consensus 404 ~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~l 483 (725)
T 2wtb_A 404 SLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKI 483 (725)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEecCcchhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhcCCCccHHHHhhhhchHHHHHHHHHHHHhCCCC-C
Q 008509 319 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-S 397 (563)
Q Consensus 319 Gk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~~~~~ID~a~~~~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~~~~-~ 397 (563)
||++++++|+|||++||++.++++|++.++++|+++++||+++.++|+|||||+++|.+|+|+++++.+.+++.++++ +
T Consensus 484 Gk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~g~p~Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~ 563 (725)
T 2wtb_A 484 KKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTY 563 (725)
T ss_dssp TCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHHSGGGCC
T ss_pred CCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhchHHHHHHHHHHHHhcCCccC
Confidence 999999999999999999999999999999999999999999988999999999999999999999999999988876 4
Q ss_pred CchHHHHHHHHcCCCCcccCccccccCCCCCCCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 008509 398 FQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRV 477 (563)
Q Consensus 398 ~~~~~l~~l~~~g~~G~k~g~GFY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~~ea~~~ 477 (563)
.+ +++++|+++|++|+|+|+|||+|++.++..+||++..++...+....+....+...+++++|++|++++++||+++|
T Consensus 564 ~~-~~l~~~v~~g~lG~k~g~GfY~y~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~nea~~~ 642 (725)
T 2wtb_A 564 KS-MIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRV 642 (725)
T ss_dssp CC-THHHHHHTTC---------------------CCCCCTTSHHHHHHTCCSCCCTTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred Ch-HHHHHHHHCCCceecCCceeEeCCCCccCCCCHHHHHHHHhhhhhccccchhhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 46 89999999999999999999999522223478988877654332111100011113678999999999999999999
Q ss_pred hhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHcCCCccCC
Q 008509 478 LEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 552 (563)
Q Consensus 478 l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~g~~f~~~ 552 (563)
++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+++.+|++|.|+++|++|+++|++||+.
T Consensus 643 l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~~~~p~~~l~~~~~~g~~f~~~ 717 (725)
T 2wtb_A 643 FAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAP 717 (725)
T ss_dssp HHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHTCCSSSC
T ss_pred HhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHcCCCccch
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999975
No 3
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=7.1e-98 Score=835.77 Aligned_cols=540 Identities=30% Similarity=0.508 Sum_probs=481.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhcccc--CCCCChHHHHHHHHHHHHH-HHhhC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT--DKLGSLSEAREVLKLARLQ-AKKTA 77 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~ 77 (563)
|++||++++|+||+++||||+|||+++|++.|.+++++++.+..||....... +...+.......+..++.. .++++
T Consensus 167 l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~~~~~~~~ 246 (715)
T 1wdk_A 167 WIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGFVAGQAG 246 (715)
T ss_dssp HHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHHGGGGSCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhcccccCccccCchhHHHHHHHHHHHHHHhcc
Confidence 57899999999999999999999999999999999999887533443222100 0000111112234555554 55999
Q ss_pred CCChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccCCCCCCCCCCCccceeEEEEcCCc
Q 008509 78 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGL 157 (563)
Q Consensus 78 ~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~~~~~~~~~~~~~~~kv~ViGaG~ 157 (563)
++|||+..+|++++.+...+++++++.|.+.|.+++.|+++++++++|+++|+++|.++.+. + .++++++|+|||+|+
T Consensus 247 g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~-~-~~~~i~kV~VIGaG~ 324 (715)
T 1wdk_A 247 PNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD-K-IAKDVKQAAVLGAGI 324 (715)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCSSEEEECCHH
T ss_pred cCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcchhHHHHHHHHHhhhhhhccccCCC-C-ccccCCEEEEECCCh
Confidence 99999999999999999999999999999999999999999999999999999988654221 2 356789999999999
Q ss_pred chHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCCCEEEEecCCC
Q 008509 158 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIES 237 (563)
Q Consensus 158 mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVieav~e~ 237 (563)
||++||..++++|++|++||++++.++.+.+.+++.+++++++|.++.++.+..+.+++.+++++++++||+|||||||+
T Consensus 325 MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIeaV~e~ 404 (715)
T 1wdk_A 325 MGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVEN 404 (715)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEEECCCSC
T ss_pred hhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHCCCCEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999988888888999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Q 008509 238 VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 317 (563)
Q Consensus 238 ~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~~~~~~~~~l~~~ 317 (563)
+++|+.+|+++++++++++||+||||+++++++++.+.+|++++|+|||||++.|+++|++++..|++++++.+.++++.
T Consensus 405 ~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~ 484 (715)
T 1wdk_A 405 PKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVAYAKK 484 (715)
T ss_dssp HHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhcCCCccHHHHhhhhchHHHHHHHHHHHHhCCCCC
Q 008509 318 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRS 397 (563)
Q Consensus 318 lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~~~~~ID~a~~~~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~~~~~ 397 (563)
+||++++++|+|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|.+|+|+++++.+.+++.+++++
T Consensus 485 lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G~p~Gp~~l~D~vGld~~~~i~~~~~~~~~~~~ 564 (715)
T 1wdk_A 485 MGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRM 564 (715)
T ss_dssp TTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHHCHHHH
T ss_pred hCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhhHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999998887765
Q ss_pred Cch--HHHHHHHHcCCCCcccCccccccC-C--CC-CCCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHHHHHHHHH
Q 008509 398 FQS--PLVDLLLKSGRNGKANGKGLYTYE-K--GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 471 (563)
Q Consensus 398 ~~~--~~l~~l~~~g~~G~k~g~GFY~y~-~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~ 471 (563)
.++ +++++|+++|++|+|+|+|||+|+ + ++ +..+||++.+++...+. + ...+++++|++|++++++
T Consensus 565 ~~~~~~~l~~~v~~g~lG~k~g~GfY~y~~~~~g~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~i~~r~l~~~~ 636 (715)
T 1wdk_A 565 KDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQKKLVDSSVLEVLKPIVY-------E-QRDVTDEDIINWMMIPLC 636 (715)
T ss_dssp CCSSCCHHHHHHHTTCCBTTTTBSSSEEC-------CEECCTHHHHHHGGGCC-------C-CCCCCHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHhCchhhhcCCcEEEecccCcCCCCcCCCCHHHHHHHhhhcc-------C-ccCCCHHHHHHHHHHHHH
Confidence 577 899999999999999999999996 3 32 34578887777653211 1 123678999999999999
Q ss_pred HHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHcCCCccC
Q 008509 472 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 551 (563)
Q Consensus 472 ~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~g~~f~~ 551 (563)
||+++|++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+ +.+|++|.|+++|++|+++|++||.
T Consensus 637 nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~~~~p~~~l~~~~~~g~~f~~ 715 (715)
T 1wdk_A 637 LETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYHPTAKLREMAKNGQSFFG 715 (715)
T ss_dssp HHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCGGGCCCHHHHHHHHTTCCSCC
T ss_pred HHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999 8899999999999999999999983
No 4
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=1.3e-85 Score=693.43 Aligned_cols=415 Identities=27% Similarity=0.469 Sum_probs=367.1
Q ss_pred HHHhhhhhhccCCCCCC----CCCCCccceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHH
Q 008509 123 HVFFAQRATSKVPNVTD----IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 198 (563)
Q Consensus 123 ~aF~~kr~~~k~~~~~~----~~~~~~~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~ 198 (563)
++|+++|...+..-... ....+++|+||+|||+|+||++||..++++|++|++||++++ ++.+.+++.+++++
T Consensus 26 ~~~~a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~ 102 (460)
T 3k6j_A 26 YLMEAHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREK 102 (460)
T ss_dssp HHHHTTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHH
T ss_pred HHHhHHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHH
Confidence 45567777755432111 122457789999999999999999999999999999999998 45677889999999
Q ss_pred HcCCCCHHHHHhhhcCeeeecCcccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCC
Q 008509 199 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD 278 (563)
Q Consensus 199 ~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~ 278 (563)
++|.++.++.+..++++++++|++++++||+|||||||++++|+++|++|++.+++++||+||||+++++++++.+.+|+
T Consensus 103 ~~G~l~~~~~~~~~~~i~~t~dl~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~ 182 (460)
T 3k6j_A 103 SFKRLNDKRIEKINANLKITSDFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPS 182 (460)
T ss_dssp HTTSCCHHHHHHHHTTEEEESCGGGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGG
T ss_pred HcCCCCHHHHHHHhcceEEeCCHHHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecccCCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHH-HCCCCHHHH
Q 008509 279 RIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV-SLGVDVFRI 357 (563)
Q Consensus 279 r~ig~hf~~P~~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~-~~G~~~~~I 357 (563)
+|+|+|||||++.|+|+||+++..|++++++.+.++++.+||+|++++|+|||++||++.++++||+.++ ++|+++++|
T Consensus 183 r~iG~HffnPv~~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~I 262 (460)
T 3k6j_A 183 NLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQI 262 (460)
T ss_dssp GEEEEECCSSTTTCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHH
T ss_pred ceEEEEecchhhhCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 779999999
Q ss_pred HHHHHhcCCCccHHHHhhhhchHHHHHHHHHHHHhCCCCCCchHHHHHHHHcCCCCcccCccccccCCCCC-CCCCCCch
Q 008509 358 DSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVL 436 (563)
Q Consensus 358 D~a~~~~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~l~~l~~~g~~G~k~g~GFY~y~~~~~-~~~~~~~~ 436 (563)
|+++.++|+|||||+++|++|+|+++++.+.+ . ..+++++++|+++|++|+|+|+|||+|+++++ +.+||++.
T Consensus 263 D~a~~~~G~pmGPf~l~D~vGlD~~~~i~~~~----~--~~~~~~l~~~v~~G~lG~KtG~GFY~y~~~~~~~~~~~~~~ 336 (460)
T 3k6j_A 263 DKIITNFGFLMGPMTVADMNGFDVMEKLKKEN----G--LEPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQRKENDTEME 336 (460)
T ss_dssp HHHHHHHTBSSCHHHHHHHHCTHHHHHHHHHS----C--CCCCHHHHHHHHTTCCBGGGTBSSSEECTTTCCEECCHHHH
T ss_pred HHHHHHcCCCcCHHHHHHHhchHHHHHHHHHh----c--cCchHHHHHHHHCCCCeeecCCEEEECCCCCCCCCCCHHHH
Confidence 99999999999999999999999999998775 1 12458999999999999999999999986543 56788877
Q ss_pred hHHHHHhhhccCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHH
Q 008509 437 PIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGAN 516 (563)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~ 516 (563)
.++...+...++. ...+++++|++|++++++||+++|++|||+++++|||.+|++|+|||+|+||||+|+|.+|++
T Consensus 337 ~~~~~~~~~~~~~----~~~~~~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~ 412 (460)
T 3k6j_A 337 QIIRRVSQNAKSN----IQIINDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLD 412 (460)
T ss_dssp HHHHHC---CCCS----SCCCSHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSH
T ss_pred HHHHHHHHhcCCC----cccCChHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHH
Confidence 7665432211221 234788999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCC--CCCCHHHHHHHHcCCCcc
Q 008509 517 YVYTSLKKWSQLYGNF--FKPSRFLEERATKGIPLS 550 (563)
Q Consensus 517 ~~~~~~~~~~~~~~~~--~~p~~~l~~~~~~g~~f~ 550 (563)
.+++.++.|++.+|++ |+|+++|++|+++|+.|-
T Consensus 413 ~~~~~l~~l~~~~g~~~~~~p~~~L~~~a~~g~~~~ 448 (460)
T 3k6j_A 413 KIANMLVHWSSLEPKESAYIVADALKTANVSTGSSG 448 (460)
T ss_dssp HHHHHHHHHHHHCTTCGGGSCCHHHHHHC-------
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHcCCCcc
Confidence 9999999999999987 999999999999887653
No 5
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-81 Score=672.11 Aligned_cols=431 Identities=33% Similarity=0.535 Sum_probs=376.5
Q ss_pred cCHHHHHHHHHHhhhhhhccCCCC--CC-CCCCCccceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Q 008509 114 MLDTSRGLVHVFFAQRATSKVPNV--TD-IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190 (563)
Q Consensus 114 ~s~~~~~~~~aF~~kr~~~k~~~~--~~-~~~~~~~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 190 (563)
.|+++++++++||.+|.++|.++. .. .+..++++++|+|||+|.||++||..++++|++|++||++++.++.+.+.+
T Consensus 1 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 1 ASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp -CHHHHHHHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 489999999999999999885431 11 123456789999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 008509 191 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270 (563)
Q Consensus 191 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~l 270 (563)
++.+++.+++|.++..+.+... ...+++++++++||+||+|||+++++|+.+++++.+++++++||+||||+++++++
T Consensus 81 ~~~l~~~~~~g~~~~~~~~~~~--~~i~~~~~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~l 158 (463)
T 1zcj_A 81 TFTLEKEASRAHQNGQASAKPK--LRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDI 158 (463)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCC--EEEESCGGGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHH--hhhcCCHHHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHH
Confidence 8888877776654432222222 23467788899999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCceeecccCCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHC
Q 008509 271 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 350 (563)
Q Consensus 271 a~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~ 350 (563)
++.+.+|++++|+|||+|++.++++|++++..|++++++.+.++++.+|+++++++++|||++||++.++++|++.++++
T Consensus 159 a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~ 238 (463)
T 1zcj_A 159 ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEE 238 (463)
T ss_dssp HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCccHHHHhhhhchHHHHHHHHHHH---HhC-------CCCC-CchHHHHHHHHcCCCCcccCcc
Q 008509 351 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD---KAF-------PDRS-FQSPLVDLLLKSGRNGKANGKG 419 (563)
Q Consensus 351 G~~~~~ID~a~~~~G~p~GPf~~~D~~Gld~~~~~~~~l~---~~~-------~~~~-~~~~~l~~l~~~g~~G~k~g~G 419 (563)
|+++++||.++.++|+|||||+++|.+|+|+.+++++.+. ..+ .+.. .+++++++|+++|++|+|+|+|
T Consensus 239 G~~~~~id~~~~~~g~p~Gp~~l~D~~GlD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~G 318 (463)
T 1zcj_A 239 GSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKG 318 (463)
T ss_dssp TCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSSCCCTTCCTTEETTEECCTHHHHHHHTTCCBGGGTBS
T ss_pred CCCHHHHHHHHHHcCCCCcHHHHHHHcchHHHHHHHHHHhhhcccccccccccccccccchHHHHHHHHCCCCeeecCCe
Confidence 9999999999999999999999999999999999998872 221 1111 1368999999999999999999
Q ss_pred ccccCC-CC-CCCCCCCchhHHHHHhhhccCCCCCCCcccchHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhc
Q 008509 420 LYTYEK-GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 497 (563)
Q Consensus 420 FY~y~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~ 497 (563)
||+|++ ++ ...++|++.+++.......++. +..+++++|+||++.+++|||++|++|||+++++|||.+|++|+
T Consensus 319 fy~y~~~g~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~ 394 (463)
T 1zcj_A 319 WYQYDKPLGRIHKPDPWLSTFLSQYREVHHIE----QRTISKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGY 394 (463)
T ss_dssp SEEESSTTCSCEEECHHHHHHHHHHHHHTTCC----CCCCCHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHS
T ss_pred eccCCCCCCCCCCCCHHHHHHHHHHHHHcCCC----cccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCC
Confidence 999953 32 2346787777766543222211 22367899999999999999999999999988999999999999
Q ss_pred CCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHHHHHcCCCcc
Q 008509 498 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIPLS 550 (563)
Q Consensus 498 g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~~~~g~~f~ 550 (563)
|||+|+||||+|+|.+|++.++++++.|++.+|+ +|.|+++|++|+++|++|.
T Consensus 395 G~p~~~gGP~~~~D~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~~~~ 449 (463)
T 1zcj_A 395 GWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPL 449 (463)
T ss_dssp CCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCCG
T ss_pred CCCCCCcChHHHHHHhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999998 8999999999999999996
No 6
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=6.8e-79 Score=652.14 Aligned_cols=401 Identities=32% Similarity=0.508 Sum_probs=358.6
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+++||+|||+|+||++||..++++|++|++||+++++++++.+++.+.+++++++|.++.++.+..+++++.++++++++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 83 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHALA 83 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHhc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCCCH
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 305 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~ 305 (563)
+||+||+||||++++|+++|+++++.+++++||+||||+++++++++.+.+|++++|+|||+|++.++++|++++..|++
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts~ 163 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAA 163 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCCH
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCC-CHHHHHHHH-HhcCCCccHHHHhhhhchHHHH
Q 008509 306 QVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAA 383 (563)
Q Consensus 306 ~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~-~~~~ID~a~-~~~G~p~GPf~~~D~~Gld~~~ 383 (563)
++++.+.++++.+||++++++|+|||++||++.++++|++.++++|. ++++||++| .++|||||||+++|.+|+|+++
T Consensus 164 e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~~ 243 (483)
T 3mog_A 164 EVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNF 243 (483)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHHH
Confidence 99999999999999999999999999999999999999999999987 899999999 6899999999999999999999
Q ss_pred HHHHHHHHhC-CCCCC-chHHHHHHHHcCCCCcccCccccccCCCCCCCC-----CCCchhH------------------
Q 008509 384 ATSKEFDKAF-PDRSF-QSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-----DPSVLPI------------------ 438 (563)
Q Consensus 384 ~~~~~l~~~~-~~~~~-~~~~l~~l~~~g~~G~k~g~GFY~y~~~~~~~~-----~~~~~~~------------------ 438 (563)
++++.+++.+ +++++ +++++++|++.|++|+|+|+|||+|+++..... +|+...+
T Consensus 244 ~v~~~~~~~~~~~~~~~~~~~~~~~v~~g~lG~k~g~GfY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 323 (483)
T 3mog_A 244 AVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLLI 323 (483)
T ss_dssp HHHHHHHHHTTSCGGGCCCHHHHHHHHTTCCBGGGTBSSSBTTSCCCCCCCCCCCCGGGCCSCEEECSTTEEEETTEEEE
T ss_pred HHHHHHHHHhcCCCccCchHHHHHHHHCCCCceeCCCEeEECCCCCCCcccccCCCchhHHHHHHHHhcccccccchhhc
Confidence 9999998876 44444 788999999999999999999999976322111 1211000
Q ss_pred -----------------------------------------HHHHhhhccCCCCCC-Cccc--chHHHHHHHHHHHHHHH
Q 008509 439 -----------------------------------------IEECRRLSNIMPGGK-PISV--TEKEIVEMILFPVVNES 474 (563)
Q Consensus 439 -----------------------------------------~~~~~~~~~~~~~~~-~~~~--~~~~i~~r~l~~~~~ea 474 (563)
+..... -+...++ +..+ ++++|+||++.+++|||
T Consensus 324 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~vev~~~~~t~~~~~~~~~~--~~~~~gk~~~~~~d~~g~i~~Rll~~~~nEA 401 (483)
T 3mog_A 324 ETQGETAQALAIRLARPVVVIDKMAGKVVTIAAAAVNPDSATRKAIY--YLQQQGKTVLQIADYPGMLIWRTVAMIINEA 401 (483)
T ss_dssp ECSSSCHHHHHHHHTSCEEEEECCSSSEEEEEECTTSCHHHHHHHHH--HHHTTTCEEEECCCCTTTTHHHHHHHHHHHH
T ss_pred ccCCcchHHHhhccccceeeeeccccceEEEecCCCCCHHHHHHHHH--HHHHcCCceeeecccccHHHHHHHHHHHHHH
Confidence 000000 0001222 1112 56899999999999999
Q ss_pred HHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHcCCCccCC
Q 008509 475 CRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAP 552 (563)
Q Consensus 475 ~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l~~~~~~g~~f~~~ 552 (563)
++|++|||+ |++|||.+|++|+|||+ |||+|+|.+|+|.++++++.|++.+|+ +|.|+++|++|+++|+.||.-
T Consensus 402 ~~~l~eGva-s~~diD~a~~~G~G~P~---GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~ 476 (483)
T 3mog_A 402 LDALQKGVA-SEQDIDTAMRLGVNYPY---GPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESE 476 (483)
T ss_dssp HHHHHTTSS-CHHHHHHHHHHHSCCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC---
T ss_pred HHHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCC
Confidence 999999998 99999999999999999 999999999999999999999999986 999999999999999999975
No 7
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=3.6e-58 Score=463.68 Aligned_cols=268 Identities=21% Similarity=0.335 Sum_probs=238.8
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHH-HHHhhhcCeeeecCc-cc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-SE 223 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~-~~ 223 (563)
.++||+|||+|+||++||..++++|++|+++|++++.++++.+++++.+++++++|.++.. ..+..+++++.++|+ ++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4689999999999999999999999999999999999999999999999999999988754 566778899999999 47
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCC
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t 303 (563)
+++||+|||||||++++|+++|++|++++++++||+||||++++++|++.+.+|+||+|+|||||++.|||||||+++.|
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~T 164 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCceEEe-cCcchhhhHHHHHHHHHHHHHHHHCCC-CHHHHHHHH-HhcCCC---ccHHHHhhhh
Q 008509 304 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDLA 377 (563)
Q Consensus 304 ~~~~~~~~~~l~~~lGk~~v~~-~d~~Gfi~nRl~~~~~~Ea~~l~~~G~-~~~~ID~a~-~~~G~p---~GPf~~~D~~ 377 (563)
++++++.+.++++.+||.|+++ +|+||||+||++.++++||++++++|+ ++++||.+| .++|+| ||||+++|++
T Consensus 165 s~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl~ 244 (319)
T 3ado_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhhc
Confidence 9999999999999999999866 899999999999999999999999997 999999999 788886 8999999999
Q ss_pred chHHHHHHHHHHHHhCCCCCCchHHHHHH-HHcCCCCcccCccccccC
Q 008509 378 GYGVAAATSKEFDKAFPDRSFQSPLVDLL-LKSGRNGKANGKGLYTYE 424 (563)
Q Consensus 378 Gld~~~~~~~~l~~~~~~~~~~~~~l~~l-~~~g~~G~k~g~GFY~y~ 424 (563)
|+|+...+-+ +. +.++.+ .+.|+.+.++|+++|+|.
T Consensus 245 G~~~~~~~~~-~~----------~~~~~~~~~~~~~p~~~~~~~~k~~ 281 (319)
T 3ado_A 245 AEGMLSYCDR-YS----------EGMKRVLKSFGSIPEFSGATVEKVN 281 (319)
T ss_dssp TTSHHHHHHH-HH----------HHHHHHHHTCCCCCCCCHHHHHHHH
T ss_pred CccHHHHHHH-hh----------HhHHHHHHHcCcccccchHHHHHHH
Confidence 9987654322 11 122222 334556666666655553
No 8
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=9.2e-56 Score=442.83 Aligned_cols=257 Identities=32% Similarity=0.439 Sum_probs=239.9
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
-++|+|||+|+||++||..++ +|++|++||++++.++++.+. + .+..+++++.+++++++++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~-------------l----~~~~~~~i~~~~~~~~~~~ 73 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ-------------I----PEELLSKIEFTTTLEKVKD 73 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH-------------S----CGGGGGGEEEESSCTTGGG
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH-------------H----HHHHhCCeEEeCCHHHHcC
Confidence 479999999999999999999 999999999999998876543 1 2344567888888888999
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCCCHH
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 306 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~~ 306 (563)
||+|||||||+.++|+.+|++++.. +++|++|||||++++++++.+.+|.|++|+|||||++.++++|++++..|+++
T Consensus 74 aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~~ 151 (293)
T 1zej_A 74 CDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDSK 151 (293)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCHH
T ss_pred CCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCHH
Confidence 9999999999999999999999887 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHH-HhcCCCc---cHHHHhhhhchHHH
Q 008509 307 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVA 382 (563)
Q Consensus 307 ~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~~~~~ID~a~-~~~G~p~---GPf~~~D~~Gld~~ 382 (563)
+++.+.++++.+||+|++++|. |++||++.++++||+.++++|+++++||+++ .++|+|+ |||+++|.+|+|++
T Consensus 152 ~~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~ 229 (293)
T 1zej_A 152 TVAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVA 229 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHH
Confidence 9999999999999999999987 9999999999999999999999999999999 7999999 99999999999999
Q ss_pred HHHHHHHHHhCCCCCC-chHHHHHHHHcCCCCcccCccccccCC
Q 008509 383 AATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGKANGKGLYTYEK 425 (563)
Q Consensus 383 ~~~~~~l~~~~~~~~~-~~~~l~~l~~~g~~G~k~g~GFY~y~~ 425 (563)
+++++.+++.++++.| |++++++|+++|++|+|+|+|||+|++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~~l~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 230 YYASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHHHHHHHCCGGGSCCHHHHHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHCCCCccccCCEeeecCc
Confidence 9999999998887444 889999999999999999999999954
No 9
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=4.6e-55 Score=439.99 Aligned_cols=275 Identities=28% Similarity=0.410 Sum_probs=257.2
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHhhhcCeeeecCcc-c
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
.+++|+|||+|.||++||..++++|++|++||++++.++++.+.+.+.+.+.+++| .++..+.+....++..+++++ .
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 46899999999999999999999999999999999999999999999999998888 888888888888888888985 6
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCC
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t 303 (563)
+++||+||+|||+++++|+.+++++.+.+++++|++||||+++++++++.+.+|.+++|+|||+|++.++++|++++..|
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t 162 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKT 162 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTS
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCceEEe-cCcchhhhHHHHHHHHHHHHHHHHCCC-CHHHHHHHH-HhcCCCccHHHHhhhhchH
Q 008509 304 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYG 380 (563)
Q Consensus 304 ~~~~~~~~~~l~~~lGk~~v~~-~d~~Gfi~nRl~~~~~~Ea~~l~~~G~-~~~~ID~a~-~~~G~p~GPf~~~D~~Gld 380 (563)
++++++.+.++++.+|+.++++ ++.|||++||++.++++||+.++++|. +|++||+++ .++|+|||||+++|.+|+|
T Consensus 163 ~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld 242 (283)
T 4e12_A 163 DPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLT 242 (283)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHH
Confidence 9999999999999999999999 799999999999999999999999986 999999999 7999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCC-chHHHHHHHHcCCCCcccCcccccc
Q 008509 381 VAAATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGKANGKGLYTY 423 (563)
Q Consensus 381 ~~~~~~~~l~~~~~~~~~-~~~~l~~l~~~g~~G~k~g~GFY~y 423 (563)
+++++.+. ..++..+ |++++++|+++|++|+|+|+|||+|
T Consensus 243 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 243 TAYNISSV---SGPKQREFAAYLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHHHT---SCHHHHHHHHHHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHhc---cccCcccCchHHHHHHHHCCCCceeCCeEeecC
Confidence 99999883 2222223 6788999999999999999999998
No 10
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=1.4e-53 Score=433.41 Aligned_cols=281 Identities=32% Similarity=0.522 Sum_probs=262.3
Q ss_pred CccceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHH-----HHHhhhcCeeee
Q 008509 144 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-----KANNALKMLKGV 218 (563)
Q Consensus 144 ~~~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-----~~~~~~~~i~~~ 218 (563)
..++++|+|||+|.||.+||..|+++|++|++||+++++++++.+.+.+.+++++++|.++.. +.+....+++.+
T Consensus 12 ~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 91 (302)
T 1f0y_A 12 KIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 91 (302)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe
Confidence 346789999999999999999999999999999999999999988888889999999987654 445556688888
Q ss_pred cCcc-cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEE
Q 008509 219 LDYS-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI 297 (563)
Q Consensus 219 ~~~~-~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEi 297 (563)
++++ ++++||+||+|||++.++|+.+++++.+++++++||+||||+++++++++.+.+|++++|+|||+|++.++++|+
T Consensus 92 ~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~~i 171 (302)
T 1f0y_A 92 TDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEV 171 (302)
T ss_dssp SCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEE
T ss_pred cCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceEEE
Confidence 8886 899999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred EeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCC-CHHHHHHHH-HhcCCCccHHHHhh
Q 008509 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLD 375 (563)
Q Consensus 298 v~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~-~~~~ID~a~-~~~G~p~GPf~~~D 375 (563)
+++..+++++++.+.++++.+|+.++++++.|||++||++.++++|+++++++|. ++++||.++ .++|||+|||+++|
T Consensus 172 ~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~~D 251 (302)
T 1f0y_A 172 IKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLD 251 (302)
T ss_dssp ECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHHHH
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999985 999999999 79999999999999
Q ss_pred hhchHHHHHHHHHHHHhC-CCCC-CchHHHHHHHHcCCCCcccCccccccC
Q 008509 376 LAGYGVAAATSKEFDKAF-PDRS-FQSPLVDLLLKSGRNGKANGKGLYTYE 424 (563)
Q Consensus 376 ~~Gld~~~~~~~~l~~~~-~~~~-~~~~~l~~l~~~g~~G~k~g~GFY~y~ 424 (563)
.+|+|+++++++.+++.+ ++++ .|++++++|+++|++|+|+|+|||+|+
T Consensus 252 ~~Gld~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 252 YVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHCHHHHHHHHHHHHHTTTTCGGGCCCHHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHHHHHHHHHHccCCCccCcCHHHHHHHHcCCCccccCcEeeeCC
Confidence 999999999999999988 7764 488999999999999999999999993
No 11
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=8.1e-46 Score=376.52 Aligned_cols=243 Identities=23% Similarity=0.359 Sum_probs=221.9
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHH-HHHhhhcCeeeecCcc-c
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDYS-E 223 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~~-~ 223 (563)
.++||+|||+|+||++||..|+++|++|++||+++++++++.+++++.++.+++.|.+... .....+++++.+++++ +
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 4789999999999999999999999999999999999999999999999998888754321 1234567889999985 7
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCC
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 303 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t 303 (563)
+++||+||+||||++++|+.+|+++.+++++++||+||||+++++++++.+.+|.|++|+|||||++.++++|+++++.|
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~t 164 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCceEEe-cCcchhhhHHHHHHHHHHHHHHHHCCC-CHHHHHHHH-HhcCCC---ccHHHHhhhh
Q 008509 304 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDLA 377 (563)
Q Consensus 304 ~~~~~~~~~~l~~~lGk~~v~~-~d~~Gfi~nRl~~~~~~Ea~~l~~~G~-~~~~ID~a~-~~~G~p---~GPf~~~D~~ 377 (563)
++++++.+.++++.+|++|+++ ++.|||++||++.++++||++++++|+ ++++||+++ .++|++ ||||+++|+.
T Consensus 165 ~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl~ 244 (319)
T 2dpo_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHhc
Confidence 9999999999999999999999 689999999999999999999999986 999999999 789987 8999999999
Q ss_pred chHHHHHHHHHH
Q 008509 378 GYGVAAATSKEF 389 (563)
Q Consensus 378 Gld~~~~~~~~l 389 (563)
| +.+.+.++.+
T Consensus 245 g-~g~~~~~~~~ 255 (319)
T 2dpo_A 245 A-EGMLSYSDRY 255 (319)
T ss_dssp T-TSHHHHHHHH
T ss_pred C-chHHHHHHHH
Confidence 8 6666665554
No 12
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.91 E-value=4.4e-24 Score=228.24 Aligned_cols=150 Identities=11% Similarity=0.098 Sum_probs=136.2
Q ss_pred cCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHH
Q 008509 261 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 340 (563)
Q Consensus 261 ntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~ 340 (563)
.+++.+.++. ...+|.++++.|+++ ++++|++++..|++++++.+..+++.+||.|+.++|.||||+||++.++
T Consensus 324 ~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~ 397 (483)
T 3mog_A 324 ETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMI 397 (483)
T ss_dssp ECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHH
T ss_pred ccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHH
Confidence 4666777766 345789999999998 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCC-CHHHHHHHH-HhcCCCccHHHHhhhhchHHHHHHHHHHHHhCCCCCC-chHHHHHHHHcCCCCccc
Q 008509 341 SQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGKAN 416 (563)
Q Consensus 341 ~~Ea~~l~~~G~-~~~~ID~a~-~~~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~~~~~~-~~~~l~~l~~~g~~G~k~ 416 (563)
+|||++++++|+ +++|||.+| .|+|||+|||+|+|.+|+|+++++++.+++.+++++| |+++|++|+++|++|..-
T Consensus 398 ~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~ 476 (483)
T 3mog_A 398 INEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESE 476 (483)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC---
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCC
Confidence 999999999998 999999999 8999999999999999999999999999999987544 999999999999766543
No 13
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.90 E-value=1e-24 Score=186.15 Aligned_cols=103 Identities=20% Similarity=0.153 Sum_probs=85.1
Q ss_pred HhCCceE-EecCcchhhhHHHHHHHHHHHHHHHHCCC-CHHHHHHHH-HhcCCCccHHHHhhhhchHHHHHHHHHHHHhC
Q 008509 317 IIKKVPV-VVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 393 (563)
Q Consensus 317 ~lGk~~v-~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~-~~~~ID~a~-~~~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 393 (563)
.++|.+| +++|+||||+||++.++++||++++++|+ +++|||.+| .++|||+|||+++|.+|+|+++++++.+++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999 88999999999999999999999999997 999999999 79999999999999999999999999999988
Q ss_pred CC-CCCchHHHHHHHHcCCCCcccCcc
Q 008509 394 PD-RSFQSPLVDLLLKSGRNGKANGKG 419 (563)
Q Consensus 394 ~~-~~~~~~~l~~l~~~g~~G~k~g~G 419 (563)
++ ++.|+++|++|+++|++|+|+|+|
T Consensus 83 g~~~~~p~~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 83 GKKIFEPAKTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp CCGGGSCCHHHHTTTHHHHHHHHHHC-
T ss_pred CCCcCCCCHHHHHHHHcCCCCccCCCC
Confidence 87 445899999999999999999988
No 14
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.84 E-value=2.1e-21 Score=197.80 Aligned_cols=201 Identities=17% Similarity=0.207 Sum_probs=161.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+||+|||+|.||.+||..|+.+|+ +|++||++++.++.....+.... .......++..+++++++++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~------------~~~~~~~~i~~t~d~~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSM------------VMFGSTSKVIGTDDYADISG 72 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHH------------HHHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhh------------hhcCCCcEEEECCCHHHhCC
Confidence 589999999999999999999999 99999999987775321111110 00111235777788889999
Q ss_pred CCEEEEec--------------CCChHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhhhccC-CCceeecccCCCC
Q 008509 227 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSS-QDRIIGAHFFSPA 289 (563)
Q Consensus 227 aDlVieav--------------~e~~~~k~~v~~~l~~~~~~~~ii--~sntS~l~i~~la~~~~~-~~r~ig~hf~~P~ 289 (563)
||+||+++ +++..+++++++++.++++ ++++ +||++.+....+++...+ |.|++|+
T Consensus 73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~------ 145 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM------ 145 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES------
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec------
Confidence 99999999 7888999999999999975 7766 688877777777777765 7788876
Q ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHH---HHHHHHHHH-------HHHHHCCC-CHHHHH
Q 008509 290 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR---AFFPYSQSA-------RLLVSLGV-DVFRID 358 (563)
Q Consensus 290 ~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nR---l~~~~~~Ea-------~~l~~~G~-~~~~ID 358 (563)
.|+.++......+.+.+|+. .++.+||++|| .+.++++++ ..++++|. +++++|
T Consensus 146 ------------~t~ld~~r~~~~la~~lg~~---~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id 210 (317)
T 2ewd_A 146 ------------AGVLDSSRFRTFIAQHFGVN---ASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQID 210 (317)
T ss_dssp ------------CHHHHHHHHHHHHHHHHTSC---GGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHH
T ss_pred ------------cCcHHHHHHHHHHHHHhCcC---hhhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHH
Confidence 36778888888898999987 47889999999 888999998 88999995 999999
Q ss_pred HHHHhcCCCccHHHHhhhhch-HHHHH
Q 008509 359 SAIRSFGLPIGPFQLLDLAGY-GVAAA 384 (563)
Q Consensus 359 ~a~~~~G~p~GPf~~~D~~Gl-d~~~~ 384 (563)
.++... ++|||+++|..|. ++.+.
T Consensus 211 ~~~~~~--~~~~~ei~~~~g~g~~~~~ 235 (317)
T 2ewd_A 211 EIVCHT--RIAWKEVADNLKTGTAYFA 235 (317)
T ss_dssp HHHHHH--HHHHHHHHHHHSSSCCCHH
T ss_pred HHHHHH--HhhHHHHHHhhcCCchHHH
Confidence 998432 7899999998776 44443
No 15
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.79 E-value=4e-20 Score=157.65 Aligned_cols=85 Identities=27% Similarity=0.437 Sum_probs=80.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCC-CCCCC
Q 008509 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPS 536 (563)
Q Consensus 458 ~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~ 536 (563)
++++|+||++.+++|||++|++|||+ |++|||.+|++|+|||+ |||+++|.+|++.++++++.+++.+++ +|.|+
T Consensus 15 ~~gfi~nRll~~~~~eA~~ll~eGva-~~~dID~a~~~g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~ 90 (110)
T 3ctv_A 15 TDKINPMDFTFVEINEAVKLVEMGVA-TPQDIDTAIKLGLNRPF---GPFELAKQFGAEQIAKRLEELAKQFGKKIFEPA 90 (110)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHTTCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHcCCCCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 56899999999999999999999999 99999999999999999 999999999999999999999999998 89999
Q ss_pred HHHHHHHHcC
Q 008509 537 RFLEERATKG 546 (563)
Q Consensus 537 ~~l~~~~~~g 546 (563)
++|++|+++|
T Consensus 91 ~~L~~~v~~G 100 (110)
T 3ctv_A 91 KTLKEGKLEE 100 (110)
T ss_dssp HHHHTTTHHH
T ss_pred HHHHHHHHcC
Confidence 9999998754
No 16
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.78 E-value=5.1e-18 Score=169.51 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=130.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC---eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 222 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~---~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 222 (563)
.+||+|||+|.||.+|+..|+++|+ +|++||+++++++...+. .| +..+++. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~----------~g-------------i~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK----------CG-------------VHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT----------TC-------------CEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH----------cC-------------CEEeCChHH
Confidence 4689999999999999999999999 999999999987764321 12 3444454 6
Q ss_pred cccCCCEEEEecCCChHHHHHHHHHHHhh-CCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEE-EeC
Q 008509 223 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI-VRT 300 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~~k~~v~~~l~~~-~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEi-v~~ 300 (563)
.+++||+||+|||. ..+.+++.++.+. ++++++|+|++++++++.+++.+..+.+++++||++|...+..++. +++
T Consensus 60 ~~~~aDvVilav~p--~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVKP--HQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSCG--GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeCH--HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 78999999999975 5678999999998 8999899999999999999999888889999999999988887774 568
Q ss_pred CCCCHHHHHHHHHHHHHhCCceEE
Q 008509 301 ERTSAQVILDLMTVGKIIKKVPVV 324 (563)
Q Consensus 301 ~~t~~~~~~~~~~l~~~lGk~~v~ 324 (563)
+.++++.++.+.++++.+|+.+++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEE
Confidence 889999999999999999984433
No 17
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.77 E-value=1.2e-18 Score=172.92 Aligned_cols=211 Identities=10% Similarity=0.018 Sum_probs=156.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCe-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
++|+|||+|.||..+|..|+.+|++ |++||+++++++...+. .| +..++++ +.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~----------~g-------------~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQK----------VE-------------AEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH----------TT-------------CEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH----------cC-------------CceeCCHHHHhc
Confidence 5899999999999999999999999 99999999887654211 01 3345566 4678
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCC-----CCCCeEEEEeC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA-----HVMPLLEIVRT 300 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~-----~~~~lvEiv~~ 300 (563)
+||+||+|+|++. + .+++.++.+.++++++|++++++++.+.+++.+..+ -..|+++|. ..++.+.++.
T Consensus 68 ~~Dvvi~av~~~~-~-~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDSA-F-AELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPHY---GVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHHH-H-HHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSSE---EEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHHH-H-HHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHhc---cCcCCceecCCCchhhcCCCeEEE-
Confidence 9999999999873 3 788889988898999999999999988876665432 235666652 2233333333
Q ss_pred CCCCHHHHHHHHHHHHHhCCceEEecCc--chh-----hhHHHH--HHHHHHHHHHHHCCCCHHHHHHHH-H--------
Q 008509 301 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TGF-----AVNRAF--FPYSQSARLLVSLGVDVFRIDSAI-R-------- 362 (563)
Q Consensus 301 ~~t~~~~~~~~~~l~~~lGk~~v~~~d~--~Gf-----i~nRl~--~~~~~Ea~~l~~~G~~~~~ID~a~-~-------- 362 (563)
..++++.++.+.++++.+|+.++++++. +++ ++|++. ...+.|++. .+.|++++++..++ .
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 2368899999999999999999999754 456 677775 344556532 46799888774444 2
Q ss_pred hc-CCCccHHHHhhhhchHHHHHHHHH
Q 008509 363 SF-GLPIGPFQLLDLAGYGVAAATSKE 388 (563)
Q Consensus 363 ~~-G~p~GPf~~~D~~Gld~~~~~~~~ 388 (563)
+. +.++||+...|..|++.....++.
T Consensus 221 ~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 221 EPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp CHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred ChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 21 456799999999999998887654
No 18
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=1.1e-16 Score=156.99 Aligned_cols=188 Identities=16% Similarity=0.203 Sum_probs=142.2
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC----eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-c
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 222 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~----~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 222 (563)
+||+|||+|.||.+|+..|+++|+ +|++||+++++++...+. .| +..+++. +
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK----------YG-------------LTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH----------HC-------------CEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH----------hC-------------CEEeCChHH
Confidence 689999999999999999999998 999999999987664321 12 3344454 5
Q ss_pred cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCC-eEEEEeCC
Q 008509 223 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTE 301 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~-lvEiv~~~ 301 (563)
.+++||+||.|++.+ ...+++.++.+.++++++|+|++++++++.+++.+..+.++++.||++|+.... ...+++++
T Consensus 60 ~~~~aDvVilav~~~--~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 137 (247)
T 3gt0_A 60 VAKNADILILSIKPD--LYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNE 137 (247)
T ss_dssp HHHHCSEEEECSCTT--THHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHHhCCEEEEEeCHH--HHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCC
Confidence 678999999999644 577888999999999999999999999999988887777899999999998776 67788888
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEecCcc-hh-hh-H---HHHHHHHHHHHH--HHHCCCCHHHHHHHH
Q 008509 302 RTSAQVILDLMTVGKIIKKVPVVVGNCT-GF-AV-N---RAFFPYSQSARL--LVSLGVDVFRIDSAI 361 (563)
Q Consensus 302 ~t~~~~~~~~~~l~~~lGk~~v~~~d~~-Gf-i~-n---Rl~~~~~~Ea~~--l~~~G~~~~~ID~a~ 361 (563)
.++++.++.++++++.+|+ ++++.+.. .. .. . -.+..++.|++. .+..|+++++.-+++
T Consensus 138 ~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~ 204 (247)
T 3gt0_A 138 MVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFA 204 (247)
T ss_dssp TCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8999999999999999998 55553211 00 00 0 011223445543 346688888877776
No 19
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.71 E-value=4.9e-16 Score=157.53 Aligned_cols=165 Identities=15% Similarity=0.163 Sum_probs=130.0
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-c
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 222 (563)
.+++|+|||+|.||.+||..|.++|+ +|++||++++.++.+. +.|..+ ..++++ +
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-----------~~G~~~-----------~~~~~~~~ 89 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGIID-----------EGTTSIAK 89 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSCS-----------EEESCTTG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-----------HCCCcc-----------hhcCCHHH
Confidence 45799999999999999999999999 9999999998876642 234221 234555 4
Q ss_pred -cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhhhccCCCceeecccCCCCC---------
Q 008509 223 -EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH--------- 290 (563)
Q Consensus 223 -~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~--i~~la~~~~~~~r~ig~hf~~P~~--------- 290 (563)
.+++||+||+|||.+. ..+++.++.+.++++++|++++|+.. +..+.+.++ .+|++.||+.++.
T Consensus 90 ~~~~~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~--~~~v~~hPm~G~e~sG~~~A~~ 165 (314)
T 3ggo_A 90 VEDFSPDFVMLSSPVRT--FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKSGVEYSLD 165 (314)
T ss_dssp GGGGCCSEEEECSCGGG--HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEECCCCCCCSGGGCCT
T ss_pred HhhccCCEEEEeCCHHH--HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC--CCEEecCcccCCcccchhhhhh
Confidence 5899999999999774 56888999999999999998877643 455665553 3999999998653
Q ss_pred ---CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEec-CcchhhhHHH
Q 008509 291 ---VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG-NCTGFAVNRA 336 (563)
Q Consensus 291 ---~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~-d~~Gfi~nRl 336 (563)
.+..+.+++++.++++.++.+.++++.+|+.++++. +..+.++..+
T Consensus 166 ~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~ 215 (314)
T 3ggo_A 166 NLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVV 215 (314)
T ss_dssp TTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHH
T ss_pred hhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 356888888888999999999999999999998884 3344444433
No 20
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.70 E-value=1.8e-16 Score=159.51 Aligned_cols=189 Identities=17% Similarity=0.174 Sum_probs=137.3
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
.|+||+|||+|.||.+||.+|+++||+|++|||++++++.. .+.| .+...+. +.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l-----------~~~G-------------a~~a~s~~e~~ 57 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-----------VAAG-------------ASAARSARDAV 57 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-----------HHTT-------------CEECSSHHHHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-----------HHcC-------------CEEcCCHHHHH
Confidence 36899999999999999999999999999999999987763 2334 2344555 567
Q ss_pred cCCCEEEEecCCChHHHHHHHH--HHHhhCCCCeEEEecCCCCCHH---HHhhhccCCCceeecccCC-CCCC-------
Q 008509 225 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFS-PAHV------- 291 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~--~l~~~~~~~~ii~sntS~l~i~---~la~~~~~~~r~ig~hf~~-P~~~------- 291 (563)
++||+||.|+|.+.+++..++. .+.+.++++++|++.+ |++++ ++++.+... |.||.+ |+..
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~s-T~~p~~~~~~a~~~~~~----G~~~lDaPVsGg~~~A~~ 132 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECS-TIAPTSARKIHAAARER----GLAMLDAPVSGGTAGAAA 132 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECS-CCCHHHHHHHHHHHHTT----TCEEEECCEESCHHHHHH
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECC-CCCHHHHHHHHHHHHHc----CCEEEecCCCCCHHHHHh
Confidence 8999999999988776554443 2666788888887644 44443 455554322 677776 5432
Q ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCc-ch---hhhHHHHHH----HHHHHHHHHHC-CCCHHHHHHHH-
Q 008509 292 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TG---FAVNRAFFP----YSQSARLLVSL-GVDVFRIDSAI- 361 (563)
Q Consensus 292 ~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~-~G---fi~nRl~~~----~~~Ea~~l~~~-G~~~~~ID~a~- 361 (563)
..|.-++.| ++++++.++++++.+|+..+++++. .| .++|.++.. .+.|++.+.+. |++++.+-+++
T Consensus 133 G~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~ 209 (300)
T 3obb_A 133 GTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMR 209 (300)
T ss_dssp TCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 356666666 7899999999999999999999752 33 355655432 36789888865 89999998888
Q ss_pred HhcCC
Q 008509 362 RSFGL 366 (563)
Q Consensus 362 ~~~G~ 366 (563)
.+.+.
T Consensus 210 ~~~~~ 214 (300)
T 3obb_A 210 RSSGG 214 (300)
T ss_dssp TSTTC
T ss_pred hCccc
Confidence 55543
No 21
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.68 E-value=5.6e-16 Score=156.55 Aligned_cols=192 Identities=15% Similarity=0.146 Sum_probs=137.0
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
+++||+|||+|.||.+||..|+++|++|++||+++++++... +.| +..++++ +.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-----------AAG-------------ASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-----------HCC-------------CeEcCCHHHHH
Confidence 367999999999999999999999999999999998876542 222 3445555 567
Q ss_pred cCCCEEEEecCCChHHHHHHHH--HHHhhCCCCeEEEecCCCCCHH--HHhhhccC-CCceeecccCCCC----CCCCeE
Q 008509 225 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFSPA----HVMPLL 295 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~--~l~~~~~~~~ii~sntS~l~i~--~la~~~~~-~~r~ig~hf~~P~----~~~~lv 295 (563)
++||+||+|||++..++..+.. ++.+.++++++|++.+++.+.. ++++.+.. ..+++.. ++.+. ....+.
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~-pv~~~~~~~~~g~l~ 136 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVSGGTAGAAAGTLT 136 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC-CEESCHHHHHHTCEE
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE-EccCChhhHhcCCce
Confidence 8999999999987766544331 6777888888887654443332 45555432 2234442 22221 123455
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchh---hhHHHHHH----HHHHHHHHHHC-CCCHHHHHHHH-HhcC
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AVNRAFFP----YSQSARLLVSL-GVDVFRIDSAI-RSFG 365 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gf---i~nRl~~~----~~~Ea~~l~~~-G~~~~~ID~a~-~~~G 365 (563)
.++.+ ++++++.+.++++.+|+.++++++ ..+. ++|+++.. +++|++.+.+. |+++++++.++ .+.+
T Consensus 137 ~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~ 213 (302)
T 2h78_A 137 FMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSG 213 (302)
T ss_dssp EEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT
T ss_pred EEeCC---CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 56555 799999999999999999999865 3443 36666544 68999988865 78999999999 5444
No 22
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.67 E-value=3.2e-16 Score=159.07 Aligned_cols=186 Identities=15% Similarity=0.064 Sum_probs=129.2
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCC--HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 221 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~--~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 221 (563)
.+++|+|||+|.||.+||..|+++|+ +|++||++ ++..+... +.| +..+++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-----------~~g-------------~~~~~~~~ 78 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-----------ELG-------------VSCKASVA 78 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-----------HTT-------------CEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-----------HCC-------------CEEeCCHH
Confidence 46799999999999999999999999 99999997 45544321 222 3345555
Q ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhhhccCCCceeecccCCCCC-------CC
Q 008509 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFSPAH-------VM 292 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~--~la~~~~~~~r~ig~hf~~P~~-------~~ 292 (563)
+.+++||+||.|||.+... +++.++.+.++++++|++++|..+.+ .+.+.+. ++++|.||+++|- ..
T Consensus 79 e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~--~~~~g~~~vd~pv~g~~~~~~g 154 (312)
T 3qsg_A 79 EVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVIS--RHRPSAQYAAVAVMSAVKPHGH 154 (312)
T ss_dssp HHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHH--HHCTTCEEEEEEECSCSTTTGG
T ss_pred HHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHH--hhcCCCeEEeccccCCchhhcC
Confidence 5678999999999998765 46788999999999988776655433 3333332 2223555554221 23
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch-----hhhHHHHH----HHHHHHHHHHHC-CCCHHHHHHHHH
Q 008509 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVNRAFF----PYSQSARLLVSL-GVDVFRIDSAIR 362 (563)
Q Consensus 293 ~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G-----fi~nRl~~----~~~~Ea~~l~~~-G~~~~~ID~a~~ 362 (563)
.+..++.++.+ +.++++++.+|+.++++++.+| .++|.++. ..++|++.+.+. |++++.++.+..
T Consensus 155 ~l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~l~~ 229 (312)
T 3qsg_A 155 RVPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADRVLASLDA 229 (312)
T ss_dssp GSEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CEEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 67777777543 7889999999999999986445 24455443 567899887765 898865553334
Q ss_pred hc
Q 008509 363 SF 364 (563)
Q Consensus 363 ~~ 364 (563)
++
T Consensus 230 ~~ 231 (312)
T 3qsg_A 230 SF 231 (312)
T ss_dssp HS
T ss_pred cC
Confidence 44
No 23
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.67 E-value=3.6e-16 Score=158.56 Aligned_cols=192 Identities=11% Similarity=0.088 Sum_probs=135.4
Q ss_pred ccceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cc
Q 008509 145 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 223 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 223 (563)
..+++|+|||+|.||.+||..|+++|++|++||+++++++... +.| +..++++ +.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~-----------~~g-------------~~~~~~~~~~ 74 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV-----------EHG-------------ASVCESPAEV 74 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-----------HTT-------------CEECSSHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----------HCC-------------CeEcCCHHHH
Confidence 3568999999999999999999999999999999998876532 222 3345555 46
Q ss_pred ccCCCEEEEecCCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCHH--HHhhhcc-CCCceeecccCC-CC---CCCCe
Q 008509 224 FKDVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFS-PA---HVMPL 294 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~--~~l~~~~~~~~ii~sntS~l~i~--~la~~~~-~~~r~ig~hf~~-P~---~~~~l 294 (563)
+++||+||.|||++..++..++ .++.+.++++++|++.+++.+.. .+++.+. ...+|+. |+.. .+ ....+
T Consensus 75 ~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l 153 (310)
T 3doj_A 75 IKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQL 153 (310)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCE
T ss_pred HHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCe
Confidence 7899999999998777664443 66778888999887654433322 3444332 2223333 2211 11 12355
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch------hhhHHHH---HHHHHHHHHHHHC-CCCHHHHHHHH-Hh
Q 008509 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 363 (563)
Q Consensus 295 vEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G------fi~nRl~---~~~~~Ea~~l~~~-G~~~~~ID~a~-~~ 363 (563)
..++.+ ++++++.++++++.+|+.++++++ +| ++.|.++ ...++|++.+.+. |++++++..++ .+
T Consensus 154 ~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~ 229 (310)
T 3doj_A 154 IILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLG 229 (310)
T ss_dssp EEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHS
T ss_pred EEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 666665 689999999999999999999975 44 3444443 2457899988865 89999999998 54
Q ss_pred cC
Q 008509 364 FG 365 (563)
Q Consensus 364 ~G 365 (563)
.+
T Consensus 230 ~~ 231 (310)
T 3doj_A 230 AM 231 (310)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 24
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.66 E-value=1.6e-15 Score=153.38 Aligned_cols=192 Identities=13% Similarity=0.152 Sum_probs=134.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
.+||+|||+|.||.+||..|+++|++|++||+++++++... +.|. ...++++ +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~------------~~~~~~~~e~~~ 63 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLL-----------AEGA------------CGAAASAREFAG 63 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTC------------SEEESSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-----------HcCC------------ccccCCHHHHHh
Confidence 46899999999999999999999999999999999877642 2231 1224455 5679
Q ss_pred CCCEEEEecCCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCH--HHHhhhccC-CCceeecccCC-CC---CCCCeEE
Q 008509 226 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFS-PA---HVMPLLE 296 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~--~~l~~~~~~~~ii~sntS~l~i--~~la~~~~~-~~r~ig~hf~~-P~---~~~~lvE 296 (563)
+||+||.|||++..++..++ +++.+.++++++|++.++..+. ..+++.+.. ...|+. |+.. ++ ....+..
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 142 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTV 142 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEE
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEE
Confidence 99999999998766655444 6677888899988765443332 234444432 223444 3321 11 1234555
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch--h---hhHHHH----HHHHHHHHHHHHC-CCCHHHHHHHH-HhcC
Q 008509 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG--F---AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 365 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G--f---i~nRl~----~~~~~Ea~~l~~~-G~~~~~ID~a~-~~~G 365 (563)
++.+ ++++++.++++++.+|+.++++++.+| . ++|+++ ...++|++.+.+. |++++++..++ .+.+
T Consensus 143 ~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 219 (303)
T 3g0o_A 143 MASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAG 219 (303)
T ss_dssp EEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT
T ss_pred EeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 6554 789999999999999999999976344 2 334333 3457899888764 89999999998 5443
No 25
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.65 E-value=2.6e-16 Score=156.90 Aligned_cols=210 Identities=11% Similarity=-0.023 Sum_probs=139.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-ccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l~ 225 (563)
+||+|||+|.||.+|+..|+++ ++| .+||+++++++...+ ..| . .+++++ .++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~----------~~g------------~--~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAE----------VYG------------G--KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHH----------HTC------------C--CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHH----------HcC------------C--ccCCHHHHHh
Confidence 5899999999999999999988 999 599999987665421 011 1 234554 578
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeeccc----CCCCC-CCCeEEEEeC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF----FSPAH-VMPLLEIVRT 300 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf----~~P~~-~~~lvEiv~~ 300 (563)
+||+||+|+|++. ..+++.++. .++++|++.+++++.+.+... .+.+.|+ .+++. ...+.++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 9999999999875 457776654 678888866656777666543 4556673 34232 1112222212
Q ss_pred CCCCHHHHHHHHHHHHHhCCceEEecCc--c------hhhhHHHHHHHHHHHHHHHH-CCCC-H---------HHHHHHH
Q 008509 301 ERTSAQVILDLMTVGKIIKKVPVVVGNC--T------GFAVNRAFFPYSQSARLLVS-LGVD-V---------FRIDSAI 361 (563)
Q Consensus 301 ~~t~~~~~~~~~~l~~~lGk~~v~~~d~--~------Gfi~nRl~~~~~~Ea~~l~~-~G~~-~---------~~ID~a~ 361 (563)
..++++.++.++++++.+|+.++++++. + ++..| .+..++.++..+.. .|++ . ..+|.++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n-~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~ 206 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASN-FPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIK 206 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHT-THHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 2235566899999999999989888632 2 33334 55667788877776 5884 4 5777777
Q ss_pred -Hh-cCCCccHHHHhhhhchHHHHHHHHHHHHhC
Q 008509 362 -RS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAF 393 (563)
Q Consensus 362 -~~-~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 393 (563)
.+ .+.++||++..|..+++..++.++.+.+.+
T Consensus 207 ~~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~~ 240 (276)
T 2i76_A 207 KMRVECSLTGPVKRGDWQVVEEERREYEKIFGNT 240 (276)
T ss_dssp HSCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSCC
T ss_pred hcChHhhCCCCcccCCHHHHHHHHHHHhccCccH
Confidence 44 667889999999999999999998875444
No 26
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.65 E-value=7.5e-16 Score=154.95 Aligned_cols=186 Identities=14% Similarity=0.096 Sum_probs=129.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
+||+|||+|.||.+||.+|+++||+|++||+++++++.. .+.| .....+. +.+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G-------------~~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL-----------TKLG-------------ATVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT-----------TTTT-------------CEECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHcC-------------CeEeCCHHHHHhc
Confidence 589999999999999999999999999999999876542 2223 2344455 67899
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhccCCCceeecccCC-CCC-------CCCeE
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFS-PAH-------VMPLL 295 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~~~~r~ig~hf~~-P~~-------~~~lv 295 (563)
||+||.|+|.+..+...+...+...+.+++|++..+ +.++. ++++.+.. .|.||.+ |+. ...+.
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~s-T~~p~~~~~~~~~~~~----~g~~~ldapVsGg~~~a~~g~l~ 136 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMS-TISPETSRQLAQVHEW----YGAHYVGAPIFARPEAVRAKVGN 136 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECS-CCCHHHHHHHHHHHHH----TTCEEEECCEECCHHHHHHTCCE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECC-CCChHHHHHHHHHHHh----cCCceecCCcCCCccccccccce
Confidence 999999999887777666677888889998887544 33433 44444431 1555654 332 23444
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch-----hhhHHHHH----HHHHHHHHHHHC-CCCHHHHHHHH-Hhc
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSF 364 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G-----fi~nRl~~----~~~~Ea~~l~~~-G~~~~~ID~a~-~~~ 364 (563)
-++.+ ++++++.++++++.+|+..+++++.+| .++|.++. ..+.|++.+.+. |++++++-.++ .+.
T Consensus 137 im~gG---~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~ 213 (297)
T 4gbj_A 137 ICLSG---NAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTL 213 (297)
T ss_dssp EEEEE---CHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTT
T ss_pred eeccc---chhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence 45555 789999999999999999999976554 35565543 346799888765 99999988888 444
Q ss_pred C
Q 008509 365 G 365 (563)
Q Consensus 365 G 365 (563)
+
T Consensus 214 ~ 214 (297)
T 4gbj_A 214 F 214 (297)
T ss_dssp T
T ss_pred c
Confidence 4
No 27
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.65 E-value=1.5e-15 Score=152.37 Aligned_cols=189 Identities=14% Similarity=0.089 Sum_probs=134.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
+||+|||+|.||..+|..|+++|++|++||+++++++... +.| +..++++ +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-----------ALG-------------AERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-----------HTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-----------HCC-------------CeecCCHHHHHhc
Confidence 5899999999999999999999999999999998876642 112 3455566 46789
Q ss_pred CCEEEEecCCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCHH---HHhhhcc-CCCceeecccCC-CC---CCCCeEE
Q 008509 227 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN---IVGEKTS-SQDRIIGAHFFS-PA---HVMPLLE 296 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~--~~l~~~~~~~~ii~sntS~l~i~---~la~~~~-~~~r~ig~hf~~-P~---~~~~lvE 296 (563)
||+||.|+|++..++..++ .++.+.++++++|++.+ +.++. ++.+.+. ...+|+. |++. ++ ....+..
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~s-t~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 135 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMS-TVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLII 135 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCC-CCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEE
Confidence 9999999998776665554 77888899999887654 44433 3433332 2233444 3322 11 1234566
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchh---hhHHHHH----HHHHHHHHHHHC-CCCHHHHHHHH-HhcC
Q 008509 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSFG 365 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gf---i~nRl~~----~~~~Ea~~l~~~-G~~~~~ID~a~-~~~G 365 (563)
++.+ ++++++.++++++.+|+.++++++ ..+. ++|+++. ..++|++.+.+. |++++++..++ .+.+
T Consensus 136 ~~gg---~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~ 211 (287)
T 3pef_A 136 LAAG---DRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAM 211 (287)
T ss_dssp EEEE---CHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTT
T ss_pred EEeC---CHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 6665 688999999999999999999865 2332 3444443 367899888865 89999999998 5543
No 28
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.64 E-value=2e-15 Score=151.97 Aligned_cols=185 Identities=19% Similarity=0.188 Sum_probs=131.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l~~ 226 (563)
++|+|||+|.||.+||..|+++|++|++||+++++++... +.| +..+++++ .++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~- 70 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLA-----------EAG-------------ATLADSVADVAA- 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHH-----------HTT-------------CEECSSHHHHTT-
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----------HCC-------------CEEcCCHHHHHh-
Confidence 5899999999999999999999999999999998876542 122 44566664 456
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhhhccC-CCceeecccCCCC---CCCCeEEEEeC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFSPA---HVMPLLEIVRT 300 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~--~la~~~~~-~~r~ig~hf~~P~---~~~~lvEiv~~ 300 (563)
||+||.|+|++..++ +++.++.+.++++++|++.+++.+.+ ++++.+.. ..+|+....+.++ ....+..++.+
T Consensus 71 aDvvi~~vp~~~~~~-~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg 149 (296)
T 3qha_A 71 ADLIHITVLDDAQVR-EVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGA 149 (296)
T ss_dssp SSEEEECCSSHHHHH-HHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEEC
T ss_pred CCEEEEECCChHHHH-HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecC
Confidence 999999999876654 55688888899999887655443322 34444432 2233332222211 12456666666
Q ss_pred CCCCHHHHHHHHHHHHHhCCceEEecC-cch----hhhHHHHH---HHHHHHHHHHHC-CCCHHHH------HHHH
Q 008509 301 ERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRAFF---PYSQSARLLVSL-GVDVFRI------DSAI 361 (563)
Q Consensus 301 ~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~G----fi~nRl~~---~~~~Ea~~l~~~-G~~~~~I------D~a~ 361 (563)
++++++.++++++.+|+.++++++ ..| ++.|.+.. ..++|++.+.+. |++++++ ..++
T Consensus 150 ---~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i 222 (296)
T 3qha_A 150 ---DREVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDAL 222 (296)
T ss_dssp ---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHH
Confidence 689999999999999999999965 222 33344433 347899988865 8999999 7777
No 29
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.63 E-value=2.1e-15 Score=151.15 Aligned_cols=192 Identities=13% Similarity=0.094 Sum_probs=132.0
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..+++. +.++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 56 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-----------LG-------------ARQASSPAEVCA 56 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-----------HT-------------CEECSCHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------CC-------------CeecCCHHHHHH
Confidence 368999999999999999999999999999999988766431 12 3445555 4678
Q ss_pred CCCEEEEecCCChHHHHHHH--HHHHhhCCCCeEEEecCCCCCH--HHHhhhcc-CCCceeecccCCCCC---CCCeEEE
Q 008509 226 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 297 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~--~~l~~~~~~~~ii~sntS~l~i--~~la~~~~-~~~r~ig~hf~~P~~---~~~lvEi 297 (563)
+||+||.|+|++..++..++ .++.+.++++++|++.+++.+. ..+++.+. +..+|+..+.+.++. ...+..+
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~ 136 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIIL 136 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEE
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEE
Confidence 99999999998766665444 6677888888888755443332 23444332 222333322222111 1234555
Q ss_pred EeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchh---hh-HHHH---HHHHHHHHHHHHC-CCCHHHHHHHH-HhcC
Q 008509 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AV-NRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 365 (563)
Q Consensus 298 v~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gf---i~-nRl~---~~~~~Ea~~l~~~-G~~~~~ID~a~-~~~G 365 (563)
+.+ ++++++.++++++.+|+.++++++ ..|. ++ |.+. ...++|++.+.+. |++++++..++ .+.+
T Consensus 137 ~gg---~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~ 211 (287)
T 3pdu_A 137 AAG---DQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAM 211 (287)
T ss_dssp EEE---CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTT
T ss_pred EeC---CHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccc
Confidence 554 789999999999999999999975 2332 23 4333 3457899887765 89999999998 5543
No 30
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.62 E-value=4.6e-15 Score=151.07 Aligned_cols=192 Identities=15% Similarity=0.135 Sum_probs=132.7
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
..++|+|||+|.||..||..|+++|++|++||+++++++... +.| +..++++ +.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~-----------~~g-------------~~~~~~~~e~~ 85 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLA-----------ALG-------------ATIHEQARAAA 85 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------TTT-------------CEEESSHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-----------HCC-------------CEeeCCHHHHH
Confidence 356999999999999999999999999999999999876532 222 3455666 467
Q ss_pred cCCCEEEEecCCChHHHHHHHH-HHHhhCCCCeEEEecCCCCCHH--HHhhhcc-CCCceeecccCCCC---CCCCeEEE
Q 008509 225 KDVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEI 297 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~-~l~~~~~~~~ii~sntS~l~i~--~la~~~~-~~~r~ig~hf~~P~---~~~~lvEi 297 (563)
++||+||.|+|++..++..+.. ++.+.++++++|++.+++.+.. .+++.+. ...+|+....+.++ ....+..+
T Consensus 86 ~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~ 165 (320)
T 4dll_A 86 RDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIM 165 (320)
T ss_dssp TTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEE
T ss_pred hcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEE
Confidence 8999999999987666544332 6777788888877655443322 3444332 22233332212111 12456666
Q ss_pred EeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchh---hhHHHH----HHHHHHHHHHHHC-CCCHHHHHHHH-HhcC
Q 008509 298 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 365 (563)
Q Consensus 298 v~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gf---i~nRl~----~~~~~Ea~~l~~~-G~~~~~ID~a~-~~~G 365 (563)
+.+ ++++++.++++++.+ +.++++++ ..|. ++|.++ ...++|++.+.+. |++++++..++ .+.+
T Consensus 166 ~gg---~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~ 239 (320)
T 4dll_A 166 AGG---KPADFERSLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFA 239 (320)
T ss_dssp EES---CHHHHHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTT
T ss_pred eCC---CHHHHHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccc
Confidence 665 789999999999999 88888865 3343 333333 2357899888865 89999999998 5544
No 31
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.61 E-value=3.9e-15 Score=142.70 Aligned_cols=158 Identities=9% Similarity=0.020 Sum_probs=126.5
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
.+||+|||+|.||++||..|.++|++|++||+. +++.+
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~~~~~ 43 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------EDIRD 43 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------GGGGG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------HHhcc
Confidence 468999999999999999999999999999982 12467
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCCeEEEEeCCCCCHH
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 306 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~lvEiv~~~~t~~~ 306 (563)
|| |.|||.+ ...+++.++.+.+++++++++++++.+...+.....++.+|++.||+... ..++.+ .+++
T Consensus 44 aD--ilavP~~--ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~-----~~~i~a--~d~~ 112 (232)
T 3dfu_A 44 FE--LVVIDAH--GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQD-----RWVASA--LDEL 112 (232)
T ss_dssp CS--EEEECSS--CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETT-----EEEEEE--SSHH
T ss_pred CC--EEEEcHH--HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCC-----ceeeeC--CCHH
Confidence 89 8899987 34678899999999999998876666666565555567789999987432 233333 2788
Q ss_pred HHHHHHHHHHHhCCceEEec--Ccchh----hhHHHHHHHHHHHHHHH---HCCC-CHHHH
Q 008509 307 VILDLMTVGKIIKKVPVVVG--NCTGF----AVNRAFFPYSQSARLLV---SLGV-DVFRI 357 (563)
Q Consensus 307 ~~~~~~~l~~~lGk~~v~~~--d~~Gf----i~nRl~~~~~~Ea~~l~---~~G~-~~~~I 357 (563)
.++.++.+++.+|.+++.+. +.+++ ..++.+.++.++|.+++ ++|+ +++|+
T Consensus 113 a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d~ 173 (232)
T 3dfu_A 113 GETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDI 173 (232)
T ss_dssp HHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhh
Confidence 99999999999999999984 45666 45777888999999999 8887 88883
No 32
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.59 E-value=9.2e-15 Score=156.34 Aligned_cols=200 Identities=12% Similarity=0.062 Sum_probs=140.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhh------hcCeeeecCc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA------LKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~------~~~i~~~~~~ 221 (563)
+||+|||+|.||..+|..|+++|++|++||+++++++...+.. -.+.....+.. ..++..++|+
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~----------~~i~e~gl~~~l~~~~~~~~l~~ttd~ 78 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGG----------VPIHEPGLKEVIARNRSAGRLRFSTDI 78 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC----------CSSCCTTHHHHHHHHHHTTCEEEECCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCC----------CCcCCCCHHHHHHHhcccCCEEEECCH
Confidence 6899999999999999999999999999999999887754210 00000000111 2367888888
Q ss_pred -ccccCCCEEEEecCC--------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhcc----CC---Cceee
Q 008509 222 -SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQ---DRIIG 282 (563)
Q Consensus 222 -~~l~~aDlVieav~e--------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~----~~---~r~ig 282 (563)
+++++||+||.|||. |+....++++++.++++++++|++ .|++++. .+.+.+. .+ ..+
T Consensus 79 ~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~-~STv~~gt~~~l~~~l~~~~~~g~~~~~~-- 155 (478)
T 2y0c_A 79 EAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD-KSTVPVGTAERVRAAVAEELAKRGGDQMF-- 155 (478)
T ss_dssp HHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHHHHTTCCCCE--
T ss_pred HHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCcCCCchHHHHHHHHHHhcCCCCCccE--
Confidence 478999999999998 447788999999999999998854 5676552 2322221 11 112
Q ss_pred cccCCCCCCCCeE---------EEEeCCCCCH----HHHHHHHHHHHHhCC--ceEEecC-----cchhhhHHHH---HH
Q 008509 283 AHFFSPAHVMPLL---------EIVRTERTSA----QVILDLMTVGKIIKK--VPVVVGN-----CTGFAVNRAF---FP 339 (563)
Q Consensus 283 ~hf~~P~~~~~lv---------Eiv~~~~t~~----~~~~~~~~l~~~lGk--~~v~~~d-----~~Gfi~nRl~---~~ 339 (563)
.+.++|....+.. .++.|.. ++ +..+.+.++++.+++ .++++.| ..+++.|.++ ..
T Consensus 156 ~v~~~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia 234 (478)
T 2y0c_A 156 SVVSNPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRIS 234 (478)
T ss_dssp EEEECCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 2456776554433 3554432 34 788999999988775 5777654 3446677665 46
Q ss_pred HHHHHHHHHHC-CCCHHHHHHHH
Q 008509 340 YSQSARLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 340 ~~~Ea~~l~~~-G~~~~~ID~a~ 361 (563)
++||+..+.+. |++++++..++
T Consensus 235 ~~nE~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 235 FMNELANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHH
Confidence 78999888865 89999999888
No 33
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.58 E-value=1.5e-14 Score=144.82 Aligned_cols=188 Identities=13% Similarity=0.045 Sum_probs=132.7
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+++|+|||+ |.||..||..|+++|++|++||++++.++... +.| +..++..+.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g-------------~~~~~~~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ-----------GMG-------------IPLTDGDGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH-----------HTT-------------CCCCCSSGGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------hcC-------------CCcCCHHHHhc
Confidence 579999999 99999999999999999999999998766532 112 11223346788
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCC--------CCCe---
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH--------VMPL--- 294 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~--------~~~l--- 294 (563)
+||+||.|+|.+. ..+++.++.+.++++++|++.+++.+++.+.+ .....++++.||+.|.. ....
T Consensus 67 ~aDvVi~av~~~~--~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~ 143 (286)
T 3c24_A 67 EADVVVLALPDNI--IEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYHG 143 (286)
T ss_dssp TCSEEEECSCHHH--HHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSS
T ss_pred CCCEEEEcCCchH--HHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCccc
Confidence 9999999999765 57888999999999999998666677776665 33346899999998765 2222
Q ss_pred -----EEEEeCCCCCHHHHHHHHHHHHHhCC---ceEEecC-cchhh----hHHHHHHH---HHHHHHH-HH-CCCCHHH
Q 008509 295 -----LEIVRTERTSAQVILDLMTVGKIIKK---VPVVVGN-CTGFA----VNRAFFPY---SQSARLL-VS-LGVDVFR 356 (563)
Q Consensus 295 -----vEiv~~~~t~~~~~~~~~~l~~~lGk---~~v~~~d-~~Gfi----~nRl~~~~---~~Ea~~l-~~-~G~~~~~ 356 (563)
..++.+..++++.++.+.++++.+|+ .++++++ ..+.+ .|-...++ +.|++.. .. .|+++++
T Consensus 144 ~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~ 223 (286)
T 3c24_A 144 GIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQA 223 (286)
T ss_dssp SSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred ccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 33333334688999999999999999 7888853 22222 23333333 3344332 22 3787776
Q ss_pred HHHHH
Q 008509 357 IDSAI 361 (563)
Q Consensus 357 ID~a~ 361 (563)
+-.++
T Consensus 224 ~~~~~ 228 (286)
T 3c24_A 224 ALDFM 228 (286)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65554
No 34
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.57 E-value=5.6e-14 Score=143.15 Aligned_cols=152 Identities=13% Similarity=0.101 Sum_probs=119.6
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCC----CeEEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecC
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G----~~V~l~d~~~~--~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 220 (563)
++||+|||+|.||.+||..|+++| ++|++||++++ .++... +.| +..+++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~-----------~~G-------------~~~~~~ 77 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR-----------KMG-------------VKLTPH 77 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH-----------HHT-------------CEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH-----------HcC-------------CEEeCC
Confidence 458999999999999999999999 89999999985 554421 112 333444
Q ss_pred c-ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccC---CCceeecccCCCCCCCCeEE
Q 008509 221 Y-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS---QDRIIGAHFFSPAHVMPLLE 296 (563)
Q Consensus 221 ~-~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~---~~r~ig~hf~~P~~~~~lvE 296 (563)
. +.+++||+||.|||. ....+++.++.+.++++++|++.++++++..+.+.+.. ..++++.|+..|........
T Consensus 78 ~~e~~~~aDvVilav~~--~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~ 155 (322)
T 2izz_A 78 NKETVQHSDVLFLAVKP--HIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGAT 155 (322)
T ss_dssp HHHHHHHCSEEEECSCG--GGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEE
T ss_pred hHHHhccCCEEEEEeCH--HHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeE
Confidence 4 567899999999984 45678889999889999999998888888877776543 45899999988887665555
Q ss_pred EE-eCCCCCHHHHHHHHHHHHHhCCceEE
Q 008509 297 IV-RTERTSAQVILDLMTVGKIIKKVPVV 324 (563)
Q Consensus 297 iv-~~~~t~~~~~~~~~~l~~~lGk~~v~ 324 (563)
++ .++.++++.++.+.++++.+|+.+.+
T Consensus 156 v~~~g~~~~~~~~~~v~~ll~~~G~~~~~ 184 (322)
T 2izz_A 156 VYATGTHAQVEDGRLMEQLLSSVGFCTEV 184 (322)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTEEEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence 54 66667889999999999999976544
No 35
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.57 E-value=3.9e-15 Score=150.36 Aligned_cols=91 Identities=26% Similarity=0.368 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHh-CC-CCCCC
Q 008509 459 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GN-FFKPS 536 (563)
Q Consensus 459 ~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~-~~-~~~p~ 536 (563)
++++.||++.+++||+++++++|++ ++++||.++..|+|||+ |||+++|.+|+|.++++++.+++.+ ++ +|.|+
T Consensus 203 ~g~i~nr~l~~~~~Ea~~l~~~g~~-~~~~id~~~~~g~g~p~---GP~~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~ 278 (302)
T 1f0y_A 203 PGFIVNRLLVPYLMEAIRLYERGDA-SKEDIDTAMKLGAGYPM---GPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPS 278 (302)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHHHHHTTTTCGGGCCC
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHccCCCccCcC
Confidence 4789999999999999999999999 99999999999999996 9999999999999999999999888 77 69999
Q ss_pred HHHHHHHHc-------CCCccCCC
Q 008509 537 RFLEERATK-------GIPLSAPV 553 (563)
Q Consensus 537 ~~l~~~~~~-------g~~f~~~~ 553 (563)
++|++|+++ |+|||+|+
T Consensus 279 ~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 279 PSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHcCCCccccCcEeeeCC
Confidence 999999974 78999993
No 36
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.56 E-value=5e-14 Score=149.63 Aligned_cols=203 Identities=15% Similarity=0.147 Sum_probs=135.1
Q ss_pred cceeEEEEcCCcchHHHHHHHHhC-CC-eEEEEeCCHH----HHHHHHHHHHHHHHHHHHcCCC--CHHHHHh------h
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSE----YLLKGIKTIEANVRGLVTRGKL--TQDKANN------A 211 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~-G~-~V~l~d~~~~----~~~~~~~~i~~~~~~~~~~g~~--~~~~~~~------~ 211 (563)
+++||+|||+|.||.++|.+|+++ |+ +|++||++++ +++...+. ...+ .....+. .
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g----------~~~i~~~e~gl~~l~~~~~~ 86 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRG----------ESPLKGEEPGLEELIGKVVK 86 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTT----------CCCSSCCGGGHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhc----------CCCccccCCCHHHHHHhhcc
Confidence 468999999999999999999999 99 9999999999 77664321 0001 1111111 1
Q ss_pred hcCeeeecCcccccCCCEEEEecCCCh----------HHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhh-hc-cC
Q 008509 212 LKMLKGVLDYSEFKDVDMVIEAVIESV----------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGE-KT-SS 276 (563)
Q Consensus 212 ~~~i~~~~~~~~l~~aDlVieav~e~~----------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~-~~-~~ 276 (563)
..++.++++.+++++||+||+|||++. .......+.+.++++++++|+ +.||+++. +++. .+ ..
T Consensus 87 ~g~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~pgtt~~v~~~ile~~ 165 (478)
T 3g79_A 87 AGKFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVV-LESTITPGTTEGMAKQILEEE 165 (478)
T ss_dssp TTCEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEE-ECSCCCTTTTTTHHHHHHHHH
T ss_pred cCCeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEE-EeCCCChHHHHHHHHHHHHHh
Confidence 356888889889999999999999763 224456778999999999876 45566543 2322 11 00
Q ss_pred CCceee--ccc-CCCCCCCCeE---------EEEeCCCCCHHHHHHHHHHHHHh-CCceEEecCc-ch---hhhHHHH--
Q 008509 277 QDRIIG--AHF-FSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKII-KKVPVVVGNC-TG---FAVNRAF-- 337 (563)
Q Consensus 277 ~~r~ig--~hf-~~P~~~~~lv---------Eiv~~~~t~~~~~~~~~~l~~~l-Gk~~v~~~d~-~G---fi~nRl~-- 337 (563)
.....| .++ ++|....+.- -|+.| .+++..+.++++++.+ ++.++++.+. .+ .++|.++
T Consensus 166 ~g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 166 SGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGG--IDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp HCCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCceeEEeCCccCCccchhhhhcCCcEEEEe--CCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHH
Confidence 000001 111 3554332210 24444 3778889999999999 8888888653 22 3445544
Q ss_pred --HHHHHHHHHHHHC-CCCHHHHHHHH
Q 008509 338 --FPYSQSARLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 338 --~~~~~Ea~~l~~~-G~~~~~ID~a~ 361 (563)
.+++||+..+.+. |+++.++=.++
T Consensus 244 ~~Ia~~nE~~~l~e~~GiD~~~v~~~~ 270 (478)
T 3g79_A 244 LQIAAINQLALYCEAMGINVYDVRTGV 270 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3568999887765 99999988887
No 37
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.55 E-value=1.9e-14 Score=146.26 Aligned_cols=187 Identities=15% Similarity=0.118 Sum_probs=135.9
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
+++|+|||+|.||..+|..|++.|++|++||++++.++... +.| +....+. +.++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~ 85 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFI-----------QEG-------------ARLGRTPAEVVS 85 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHH-----------HTT-------------CEECSCHHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----------HcC-------------CEEcCCHHHHHh
Confidence 57899999999999999999999999999999998766532 122 1233444 4678
Q ss_pred CCCEEEEecCCChHHHHHHHHH---HHhhCCCCeEEEecCCCC--CHHHHhhhcc-CCCceeecccCCCC---CCCCeEE
Q 008509 226 DVDMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTI--DLNIVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 296 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~---l~~~~~~~~ii~sntS~l--~i~~la~~~~-~~~r~ig~hf~~P~---~~~~lvE 296 (563)
+||+||+|+|+...++.. +.+ +.+.+.++++|++.+++. ...++++.+. ++.++++.++++++ ....+.+
T Consensus 86 ~~DvVi~av~~~~~~~~v-~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~ 164 (316)
T 2uyy_A 86 TCDITFACVSDPKAAKDL-VLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 164 (316)
T ss_dssp HCSEEEECCSSHHHHHHH-HHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEE
T ss_pred cCCEEEEeCCCHHHHHHH-HcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEE
Confidence 999999999977666543 433 336677888776544433 2455666653 46688888877533 3456677
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhCCceEEecCc-ch----hhhHHH---HHHHHHHHHHHHH-CCCCHHHHHHHH
Q 008509 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TG----FAVNRA---FFPYSQSARLLVS-LGVDVFRIDSAI 361 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~-~G----fi~nRl---~~~~~~Ea~~l~~-~G~~~~~ID~a~ 361 (563)
++.+ +++.++.+.++++.+|+.++++++. .+ .+.|.+ +..+++|++.+.+ .|+++++++.++
T Consensus 165 ~~~g---~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 165 LAAG---DRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp EEEE---CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EeCC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 7776 5789999999999999998888652 22 355665 3466889988775 589999999888
No 38
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.55 E-value=1.3e-13 Score=136.17 Aligned_cols=149 Identities=12% Similarity=0.089 Sum_probs=113.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
+||+|||+|.||..+|..|+++| ++|++||+++++++...+. .| +..+++. +.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~~~~- 56 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----------LG-------------VETSATLPELH- 56 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----------TC-------------CEEESSCCCCC-
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh----------cC-------------CEEeCCHHHHh-
Confidence 37999999999999999999999 9999999999887653210 12 3344455 567
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCC-eEEEEeCCCCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 304 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~-lvEiv~~~~t~ 304 (563)
+||+||.|+| .....+++.++.+ + +++|++++|++++..+++.+..+.+++..++..|..... ...++.+..++
T Consensus 57 ~~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~ 131 (263)
T 1yqg_A 57 SDDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVS 131 (263)
T ss_dssp TTSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSC
T ss_pred cCCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCC
Confidence 9999999999 3344566666544 4 889999989999988888776656788884433554433 45677777789
Q ss_pred HHHHHHHHHHHHHhCCceEEec
Q 008509 305 AQVILDLMTVGKIIKKVPVVVG 326 (563)
Q Consensus 305 ~~~~~~~~~l~~~lGk~~v~~~ 326 (563)
++.++.+.++++.+|+.+ +++
T Consensus 132 ~~~~~~~~~l~~~~g~~~-~~~ 152 (263)
T 1yqg_A 132 ETDRRIADRIMKSVGLTV-WLD 152 (263)
T ss_dssp HHHHHHHHHHHHTTEEEE-ECS
T ss_pred HHHHHHHHHHHHhCCCEE-EeC
Confidence 999999999999999876 665
No 39
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.55 E-value=9e-14 Score=140.55 Aligned_cols=189 Identities=10% Similarity=0.027 Sum_probs=130.0
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
..++|+|||+|.||.+||..|+++|++|++||+++++++... +.| +..++++ +.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g-------------~~~~~~~~e~~ 63 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALV-----------AAG-------------AHLCESVKAAL 63 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-----------HHT-------------CEECSSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HCC-------------CeecCCHHHHH
Confidence 357899999999999999999999999999999999877642 112 2334455 567
Q ss_pred cCCCEEEEecCCChHHHHHHHH--HHHhhCCCCeEEEecCCCCCH--HHHhhhcc-CCCceeecccCCC-CC--CCCeEE
Q 008509 225 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSP-AH--VMPLLE 296 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~--~l~~~~~~~~ii~sntS~l~i--~~la~~~~-~~~r~ig~hf~~P-~~--~~~lvE 296 (563)
++||+||.|+|.+..++. ++. .+... .++++|++.+++.+. .++.+.+. ...+|+..+.+.+ +. ...+..
T Consensus 64 ~~aDvVi~~vp~~~~~~~-v~~~~~l~~~-~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i 141 (306)
T 3l6d_A 64 SASPATIFVLLDNHATHE-VLGMPGVARA-LAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHS 141 (306)
T ss_dssp HHSSEEEECCSSHHHHHH-HHTSTTHHHH-TTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEE
T ss_pred hcCCEEEEEeCCHHHHHH-Hhcccchhhc-cCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEE
Confidence 899999999998766654 444 56554 577777654433322 24444432 2334444322221 11 123454
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhCCceEEe--cC--cchhhhHHHH---HHHHHHHHHHHHC-CCCHHHHHHHH-Hh
Q 008509 297 IVRTERTSAQVILDLMTVGKIIKKVPVVV--GN--CTGFAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 363 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lGk~~v~~--~d--~~Gfi~nRl~---~~~~~Ea~~l~~~-G~~~~~ID~a~-~~ 363 (563)
++.+ ++++++.++++++.+|+.++++ ++ ..|.+.+-++ ...++|++.+.+. |++++++..++ .+
T Consensus 142 ~~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~ 214 (306)
T 3l6d_A 142 IHTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLET 214 (306)
T ss_dssp EEEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred EEcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 5555 7899999999999998899999 64 4567777332 2457899887765 89999998888 44
No 40
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.55 E-value=1.5e-13 Score=139.60 Aligned_cols=193 Identities=12% Similarity=0.068 Sum_probs=128.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeee-cCcccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~l 224 (563)
+++|+|||+|.||.+||..|+++| ++|++||++++..++.... .+.+.+.| + .+ +..+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~----~~~~~~~g-------------~-~~~s~~e~~ 85 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGAL----RARAAELG-------------V-EPLDDVAGI 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHH----HHHHHHTT-------------C-EEESSGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHH----HHHHHHCC-------------C-CCCCHHHHH
Confidence 468999999999999999999999 9999999998322111110 11112222 2 23 334678
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhhhccC-CCceeecccCCCC--CCCCeEEEEe
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFSPA--HVMPLLEIVR 299 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~--~la~~~~~-~~r~ig~hf~~P~--~~~~lvEiv~ 299 (563)
++||+||.|||.+...+ .+.++.+.++++++|++.++..+.+ .+++.+.. ..+|+....+.|+ ....+..++.
T Consensus 86 ~~aDvVi~avp~~~~~~--~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vg 163 (317)
T 4ezb_A 86 ACADVVLSLVVGAATKA--VAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVA 163 (317)
T ss_dssp GGCSEEEECCCGGGHHH--HHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEE
T ss_pred hcCCEEEEecCCHHHHH--HHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEe
Confidence 99999999999887653 4588888899999888665443322 44444432 2344433222232 2345666777
Q ss_pred CCCCCHHHHHHHHHHHHHhCCceEEecCcch-----hhhHHHH----HHHHHHHHHHHHC-CCCHHHHHHHHHhc
Q 008509 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVNRAF----FPYSQSARLLVSL-GVDVFRIDSAIRSF 364 (563)
Q Consensus 300 ~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G-----fi~nRl~----~~~~~Ea~~l~~~-G~~~~~ID~a~~~~ 364 (563)
++.. +.++++++.+|+.++++++.+| .++|.++ ...++|++.+.+. |++++.++.+..+.
T Consensus 164 g~~~-----~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~ 233 (317)
T 4ezb_A 164 GRRA-----VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETF 233 (317)
T ss_dssp STTH-----HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred CChH-----HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 7432 7889999999999999986445 2444433 4568899988865 89887776665443
No 41
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.54 E-value=4e-15 Score=148.49 Aligned_cols=92 Identities=24% Similarity=0.317 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHH
Q 008509 461 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 539 (563)
Q Consensus 461 ~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l 539 (563)
+++||++.++++||+.++++|+ ++++||.++..|+|+|++..|||+++|.+|+|.++++++.+++.+++ +|.|+++|
T Consensus 174 fi~Nrll~~~~~EA~~l~~~Gv--~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~l 251 (293)
T 1zej_A 174 SLVNRFNAAVLSEASRMIEEGV--RAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVAYYASLYLYKRFGDEKFKPPEWL 251 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTC--CHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHHHHHHHHHHHHcCCCcCCCCHHH
Confidence 8999999999999999999998 79999999999999998788999999999999999999999999887 89999999
Q ss_pred HHHHH-------cCCCccCCCC
Q 008509 540 EERAT-------KGIPLSAPVS 554 (563)
Q Consensus 540 ~~~~~-------~g~~f~~~~~ 554 (563)
++|++ +|+|||+|.+
T Consensus 252 ~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 252 QEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHCCCCccccCCEeeecCc
Confidence 99996 4899999955
No 42
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.52 E-value=4e-14 Score=151.05 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=97.8
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCC--CHHHHHHHH-HhcCCCc---cHHHHhh
Q 008509 302 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLD 375 (563)
Q Consensus 302 ~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~--~~~~ID~a~-~~~G~p~---GPf~~~D 375 (563)
.+++++.+.+..+...+|+.++.+ .+|+++||++.+++|||++++++|+ +++|||.+| .|+|||+ |||+++|
T Consensus 331 ~~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~D 408 (463)
T 1zcj_A 331 KPDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAA 408 (463)
T ss_dssp EECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHHH
Confidence 478999999888888888766544 4899999999999999999999998 599999999 9999999 9999999
Q ss_pred hhchHHHHHHHHHHHHhCCC--CCCchHHHHHHHHcCC
Q 008509 376 LAGYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGR 411 (563)
Q Consensus 376 ~~Gld~~~~~~~~l~~~~~~--~~~~~~~l~~l~~~g~ 411 (563)
.+|+|.++++++.+++.+++ ++.|+++|++|+++|+
T Consensus 409 ~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~ 446 (463)
T 1zcj_A 409 SVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 446 (463)
T ss_dssp HHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTC
T ss_pred HhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCC
Confidence 99999999999999999998 4559999999999884
No 43
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.52 E-value=1e-13 Score=139.70 Aligned_cols=187 Identities=16% Similarity=0.133 Sum_probs=130.9
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
.++|+|||+|.||..+|..|+..|++|++||++++.++... +.| +...+++ +.+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~ 59 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVV-----------AQG-------------AQACENNQKVAA 59 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------TTT-------------CEECSSHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-----------HCC-------------CeecCCHHHHHh
Confidence 36899999999999999999999999999999998766532 112 2334455 4578
Q ss_pred CCCEEEEecCCChHHHHHHH--HHHHhhCCCCeEEEecCCCC--CHHHHhhhccC-CCceeecccCCCCC----CCCeEE
Q 008509 226 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTI--DLNIVGEKTSS-QDRIIGAHFFSPAH----VMPLLE 296 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~--~~l~~~~~~~~ii~sntS~l--~i~~la~~~~~-~~r~ig~hf~~P~~----~~~lvE 296 (563)
++|+||.|+|.+..++..+. .++.+.++++++|++.+++. ....+.+.+.. ..+++.. +..+.. ...+..
T Consensus 60 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~ 138 (301)
T 3cky_A 60 ASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAGTLTI 138 (301)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHTCEEE
T ss_pred CCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEE
Confidence 89999999998776655444 27888899999998877776 34566665542 2233332 111110 122344
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchh----hhHHH---HHHHHHHHHHHHH-CCCCHHHHHHHH
Q 008509 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF----AVNRA---FFPYSQSARLLVS-LGVDVFRIDSAI 361 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gf----i~nRl---~~~~~~Ea~~l~~-~G~~~~~ID~a~ 361 (563)
++.+ +++.++.+.++++.+|+.++++++ ..|. +.|.+ +...++|++.+.+ .|+++++++.++
T Consensus 139 ~~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 139 MVGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp EEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4444 788999999999999998887754 3443 34544 3346889988775 589999988887
No 44
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.51 E-value=1.1e-13 Score=138.69 Aligned_cols=157 Identities=15% Similarity=0.097 Sum_probs=120.2
Q ss_pred cceeEEEEcCCcchHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-c
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 222 (563)
++++|+|||+|.||.++|..|+++ |++|++||++++.++... +.|... ..++++ +
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~~-----------~~~~~~~~ 62 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL-----------ERGIVD-----------EATADFKV 62 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH-----------HTTSCS-----------EEESCTTT
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH-----------HcCCcc-----------cccCCHHH
Confidence 457999999999999999999988 689999999998766532 223210 234555 4
Q ss_pred cccCCCEEEEecCCChHHHHHHHHHHHhh-CCCCeEEEecCCCCC--HHHHhhhccC-CCceeecccC------CCCC--
Q 008509 223 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF------SPAH-- 290 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~~k~~v~~~l~~~-~~~~~ii~sntS~l~--i~~la~~~~~-~~r~ig~hf~------~P~~-- 290 (563)
.+++||+||.|||.+. ..+++.++.+. ++++++|++.+|+.. ...+.+.+.. ..++++.||+ .|..
T Consensus 63 ~~~~aDvVilavp~~~--~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~ 140 (290)
T 3b1f_A 63 FAALADVIILAVPIKK--TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAAN 140 (290)
T ss_dssp TGGGCSEEEECSCHHH--HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCC
T ss_pred hhcCCCEEEEcCCHHH--HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhh
Confidence 6789999999999764 36888889888 889998876544322 2566666654 6789999998 4443
Q ss_pred ----CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEec
Q 008509 291 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326 (563)
Q Consensus 291 ----~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~ 326 (563)
....+.++++..++++..+.+.++++.+|+.++.+.
T Consensus 141 ~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~ 180 (290)
T 3b1f_A 141 VNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEID 180 (290)
T ss_dssp TTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECC
T ss_pred HHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcC
Confidence 345677888888889999999999999999888875
No 45
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=7.1e-14 Score=142.59 Aligned_cols=153 Identities=14% Similarity=0.135 Sum_probs=115.7
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 224 (563)
.+++|+|||+|.||.+||..|.++|++|++||++++.++.+. +.|. ..+++++ .+
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~-----------~~G~-------------~~~~~~~e~~ 62 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAV-----------DEGF-------------DVSADLEATL 62 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH-----------HTTC-------------CEESCHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCC-------------eeeCCHHHHH
Confidence 357899999999999999999999999999999998876542 2231 2234442 33
Q ss_pred ----cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC--CHHHHhhhccCCCceeecccCCCCCC-------
Q 008509 225 ----KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSSQDRIIGAHFFSPAHV------- 291 (563)
Q Consensus 225 ----~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l--~i~~la~~~~~~~r~ig~hf~~P~~~------- 291 (563)
.+||+||.|||. .....++.++.+. +++++|++.+|+- .+..+.+... ..+|++.||+..+..
T Consensus 63 ~~a~~~aDlVilavP~--~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~ 138 (341)
T 3ktd_A 63 QRAAAEDALIVLAVPM--TAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASM 138 (341)
T ss_dssp HHHHHTTCEEEECSCH--HHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCC
T ss_pred HhcccCCCEEEEeCCH--HHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhh
Confidence 358999999994 4567888999886 8889887765543 2345554443 468999999876531
Q ss_pred -----CCeEEEEeCCCCCHH--------HHHHHHHHHHHhCCceEEec
Q 008509 292 -----MPLLEIVRTERTSAQ--------VILDLMTVGKIIKKVPVVVG 326 (563)
Q Consensus 292 -----~~lvEiv~~~~t~~~--------~~~~~~~l~~~lGk~~v~~~ 326 (563)
...+.+++++.++++ .++.+.++++.+|..++.+.
T Consensus 139 ~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~ 186 (341)
T 3ktd_A 139 DGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSR 186 (341)
T ss_dssp SSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred hHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeC
Confidence 234667788778877 89999999999999998884
No 46
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.49 E-value=7.4e-13 Score=130.48 Aligned_cols=151 Identities=12% Similarity=0.086 Sum_probs=115.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
+++|+|||+|.||..++..|.+.|++|.+||+++++++...+. .| +..++++ +.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~----------~g-------------~~~~~~~~~~~~ 59 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ----------LA-------------LPYAMSHQDLID 59 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH----------HT-------------CCBCSSHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHH----------cC-------------CEeeCCHHHHHh
Confidence 3589999999999999999999999999999999887653211 02 2234455 4568
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCC-eEEEEeCCCCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 304 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~-lvEiv~~~~t~ 304 (563)
++|+||.|+|.+ ...+++.+ +.+++++++.+++++++.+.+.+....+++..|+..|..... ...++.+..++
T Consensus 60 ~~D~Vi~~v~~~--~~~~v~~~----l~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~ 133 (259)
T 2ahr_A 60 QVDLVILGIKPQ--LFETVLKP----LHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVS 133 (259)
T ss_dssp TCSEEEECSCGG--GHHHHHTT----SCCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCC
T ss_pred cCCEEEEEeCcH--hHHHHHHH----hccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCC
Confidence 999999999943 33455543 347888889888999988888776555788888777766544 45677777789
Q ss_pred HHHHHHHHHHHHHhCCceEEecC
Q 008509 305 AQVILDLMTVGKIIKKVPVVVGN 327 (563)
Q Consensus 305 ~~~~~~~~~l~~~lGk~~v~~~d 327 (563)
++.++.+.++++.+| .++++++
T Consensus 134 ~~~~~~~~~ll~~~G-~~~~~~~ 155 (259)
T 2ahr_A 134 QELQARVRDLTDSFG-STFDISE 155 (259)
T ss_dssp HHHHHHHHHHHHTTE-EEEECCG
T ss_pred HHHHHHHHHHHHhCC-CEEEecH
Confidence 999999999999999 4666653
No 47
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.49 E-value=1e-12 Score=130.85 Aligned_cols=164 Identities=17% Similarity=0.146 Sum_probs=119.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
++|+|||+|.||..+|..|+++|++|++||++++.++... +.|.. ...+++++.+.+|
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~~~~ 58 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-----------ERQLV-----------DEAGQDLSLLQTA 58 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGGTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------hCCCC-----------ccccCCHHHhCCC
Confidence 3799999999999999999999999999999998766532 12321 0234555444899
Q ss_pred CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCC------------CCCeE
Q 008509 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH------------VMPLL 295 (563)
Q Consensus 228 DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~------------~~~lv 295 (563)
|+||.|+|.+ ...+++.++.+.++++++|++. ++.+...+........++++.|++.... ....+
T Consensus 59 D~vi~av~~~--~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~ 135 (279)
T 2f1k_A 59 KIIFLCTPIQ--LILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPY 135 (279)
T ss_dssp SEEEECSCHH--HHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEE
T ss_pred CEEEEECCHH--HHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcE
Confidence 9999999954 5678889999889999988764 5555443333222223899999875211 23467
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchhhhHHH
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAVNRA 336 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gfi~nRl 336 (563)
.++++..++++..+.+.+++..+|..++++.+ ..+.+...+
T Consensus 136 ~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~ 177 (279)
T 2f1k_A 136 VLTPTEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWI 177 (279)
T ss_dssp EEEECTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 78887778999999999999999998888864 333444333
No 48
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.49 E-value=3.9e-13 Score=135.33 Aligned_cols=184 Identities=17% Similarity=0.224 Sum_probs=129.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|..|+.+|++|++||++++.++... +.| +..++++ +.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-----------AAG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----------HCC-------------CeecCCHHHHHhC
Confidence 5899999999999999999999999999999998766532 112 2334555 45788
Q ss_pred CCEEEEecCCChHHHHHHH--HHHHhhCCCCeEEEecCCCCC--HHHHhhhccCCCceeecccCCC-CC------CCCeE
Q 008509 227 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSP-AH------VMPLL 295 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~--~~l~~~~~~~~ii~sntS~l~--i~~la~~~~~~~r~ig~hf~~P-~~------~~~lv 295 (563)
+|+||.|+|....++..++ .++.+.++++++|++.+++.+ ...+.+.+... |.||++. .. ....+
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~pv~~~~~~~~~~~~ 137 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK----GVEMLDAPVSGGEPKAIDGTL 137 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT----TCEEEECCEESHHHHHHHTCE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEecCCCCHhHHhcCCE
Confidence 9999999997766654443 567788899998877655544 24566655431 3344322 11 01123
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchhh---hHHHHH----HHHHHHHHHHH-CCCCHHHHHHHH
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAFF----PYSQSARLLVS-LGVDVFRIDSAI 361 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gfi---~nRl~~----~~~~Ea~~l~~-~G~~~~~ID~a~ 361 (563)
.++.+. +++.++.+.++++.+|+.++++++ ..|.. +++.+. ..++|+..+.+ .|+++++++.++
T Consensus 138 ~~~~~~--~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 138 SVMVGG--DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp EEEEES--CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEeCC--CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 444432 788999999999999998888854 44543 344433 56789887765 589999998887
No 49
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.48 E-value=7.6e-13 Score=136.16 Aligned_cols=174 Identities=10% Similarity=0.036 Sum_probs=120.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
.++|+|||+|.||..||..|+++|++|++||+++++++... +.| +..++++ +.++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~-----------~~g-------------~~~~~s~~e~~~ 77 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALE-----------REG-------------IAGARSIEEFCA 77 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------TTT-------------CBCCSSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-----------HCC-------------CEEeCCHHHHHh
Confidence 36899999999999999999999999999999999876642 222 2334455 3456
Q ss_pred CC---CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhhhcc-CCCceeecccCCCCC---CCCeEE
Q 008509 226 DV---DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLE 296 (563)
Q Consensus 226 ~a---DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~--~la~~~~-~~~r~ig~hf~~P~~---~~~lvE 296 (563)
++ |+||.|||.+ . ..+++.++.+.++++++|++.+++.+.+ ++++.+. +..+|++...+.++. ..+ .
T Consensus 78 ~a~~~DvVi~~vp~~-~-v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~--~ 153 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA-V-VDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY--C 153 (358)
T ss_dssp HSCSSCEEEECSCGG-G-HHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC--E
T ss_pred cCCCCCEEEEeCCHH-H-HHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC--e
Confidence 67 9999999988 4 4577889999999999998877665433 4444443 222344332222111 123 2
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhC--------------------CceEEecC-cchhhhHHH---H----HHHHHHHHHHH
Q 008509 297 IVRTERTSAQVILDLMTVGKIIK--------------------KVPVVVGN-CTGFAVNRA---F----FPYSQSARLLV 348 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lG--------------------k~~v~~~d-~~Gfi~nRl---~----~~~~~Ea~~l~ 348 (563)
++.+ .++++++.++++++.+| +.++++++ ..|.++..+ + ...++|++.+.
T Consensus 154 im~G--G~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la 231 (358)
T 4e21_A 154 LMIG--GEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNIL 231 (358)
T ss_dssp EEEE--SCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeec--CCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333 37899999999999999 56778864 455544333 2 23467888888
Q ss_pred HC
Q 008509 349 SL 350 (563)
Q Consensus 349 ~~ 350 (563)
+.
T Consensus 232 ~~ 233 (358)
T 4e21_A 232 HH 233 (358)
T ss_dssp HT
T ss_pred Hh
Confidence 76
No 50
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.48 E-value=9.3e-14 Score=139.71 Aligned_cols=182 Identities=20% Similarity=0.168 Sum_probs=127.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|..|+++|++|++||+++++++... +.| +..+++. +.+++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~~ 56 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQ-----------DAG-------------EQVVSSPADVAEK 56 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHH-----------TTT-------------CEECSSHHHHHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcC-------------CeecCCHHHHHhc
Confidence 3799999999999999999999999999999998766532 112 3344555 45788
Q ss_pred CCEEEEecCCChHHHHHHHHH---HHhhCCCCeEEEecCCCCCHHHHhh---hccCCCceeecccCC-CCCC------CC
Q 008509 227 VDMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFS-PAHV------MP 293 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~---l~~~~~~~~ii~sntS~l~i~~la~---~~~~~~r~ig~hf~~-P~~~------~~ 293 (563)
+|+||.|+|....++ .++.+ +.+.++++++|++ +|++++..+.. .+.. + |.+|++ |... ..
T Consensus 57 ~Dvvi~~vp~~~~~~-~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~--~--g~~~~~~p~~~g~~~a~~~ 130 (296)
T 2gf2_A 57 ADRIITMLPTSINAI-EAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEK--M--GAVFMDAPVSGGVGAARSG 130 (296)
T ss_dssp CSEEEECCSSHHHHH-HHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHH--T--TCEEEECCEESHHHHHHHT
T ss_pred CCEEEEeCCCHHHHH-HHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHH--c--CCEEEEcCCCCChhHHhcC
Confidence 999999998776654 34444 3346688998888 88888765443 2221 1 445544 3221 12
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecC-cchh---hhHHHHH----HHHHHHHHHHH-CCCCHHHHHHHH
Q 008509 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF---AVNRAFF----PYSQSARLLVS-LGVDVFRIDSAI 361 (563)
Q Consensus 294 lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~Gf---i~nRl~~----~~~~Ea~~l~~-~G~~~~~ID~a~ 361 (563)
.+.++.+ .+++.++.+.++++.+|+.++.+++ ..|. ++|+.+. .+++|++.+.+ .|+++++++.++
T Consensus 131 ~~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 131 NLTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKIL 205 (296)
T ss_dssp CEEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cEEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 2334444 3678899999999999998888754 2222 3454442 47889988775 589999999988
No 51
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.48 E-value=6e-13 Score=141.14 Aligned_cols=200 Identities=15% Similarity=0.115 Sum_probs=132.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhh------hcCeeeecCc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA------LKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~------~~~i~~~~~~ 221 (563)
+||+|||+|.||..+|..|+++|++|++||+++++++...+. .-.+.....+.. ..++..++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~----------~~~i~e~~l~~~~~~~~~~g~l~~t~~~ 70 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG----------KSPIVEPGLEALLQQGRQTGRLSGTTDF 70 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----------CCSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCC----------CCCcCCCCHHHHHHhhcccCceEEeCCH
Confidence 379999999999999999999999999999999987764321 000111111111 2357778888
Q ss_pred c-cccCCCEEEEecCCChH---------HHHHHHHHHHhhCCC---CeEEEecCCCCCHH----HHhhhccC--CCce-e
Q 008509 222 S-EFKDVDMVIEAVIESVP---------LKQKIFSELEKACPP---HCILATNTSTIDLN----IVGEKTSS--QDRI-I 281 (563)
Q Consensus 222 ~-~l~~aDlVieav~e~~~---------~k~~v~~~l~~~~~~---~~ii~sntS~l~i~----~la~~~~~--~~r~-i 281 (563)
+ ++++||+||.|||...+ ++ ++++++.+++++ +++|++ .|+.++. .+...+.. ..++ +
T Consensus 71 ~~~~~~aDvviiaVptp~~~~~~~dl~~v~-~v~~~i~~~l~~~~~~~iVV~-~Stv~~g~t~~~l~~~l~~~~g~~~~~ 148 (436)
T 1mv8_A 71 KKAVLDSDVSFICVGTPSKKNGDLDLGYIE-TVCREIGFAIREKSERHTVVV-RSTVLPGTVNNVVIPLIEDCSGKKAGV 148 (436)
T ss_dssp HHHHHTCSEEEECCCCCBCTTSSBCCHHHH-HHHHHHHHHHTTCCSCCEEEE-CSCCCTTHHHHTHHHHHHHHHSCCBTT
T ss_pred HHHhccCCEEEEEcCCCcccCCCcchHHHH-HHHHHHHHHhcccCCCcEEEE-eCCcCCCchHHHHHHHHHHhcCcccCC
Confidence 5 68999999999998764 44 567889888888 888764 4444432 23333321 1111 1
Q ss_pred ecc-cCCCCCCCCeE---------EEEeCCCCCHHHHHHHHHHHHHhCCceEEecCc-----chhhhHHHH---HHHHHH
Q 008509 282 GAH-FFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-----TGFAVNRAF---FPYSQS 343 (563)
Q Consensus 282 g~h-f~~P~~~~~lv---------Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~-----~Gfi~nRl~---~~~~~E 343 (563)
..+ .++|....+.. .++.+. ++++..+.+.++++.+|+ ++.+.+. .+++.|.+. .++++|
T Consensus 149 ~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~-~v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE 226 (436)
T 1mv8_A 149 DFGVGTNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDA-PIIRKTVEVAEMIKYTCNVWHAAKVTFANE 226 (436)
T ss_dssp TBEEEECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSS-CEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCC-CEEcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 23555433322 234333 368889999999999997 4444432 335556543 467899
Q ss_pred HHHHHHC-CCCHHHHHHHH
Q 008509 344 ARLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 344 a~~l~~~-G~~~~~ID~a~ 361 (563)
+..+.+. |+++++++.++
T Consensus 227 ~~~l~~~~Gid~~~v~~~~ 245 (436)
T 1mv8_A 227 IGNIAKAVGVDGREVMDVI 245 (436)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHh
Confidence 9888865 89999999998
No 52
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.47 E-value=2.5e-13 Score=143.46 Aligned_cols=200 Identities=17% Similarity=0.130 Sum_probs=131.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHh------hhcCeeeecCc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN------ALKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~------~~~~i~~~~~~ 221 (563)
-+|+|||+|.||.++|.+|+++|++|++||+++++++...+.. ..+.....+. ...++++++|+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~----------~~~~epgl~~~~~~~~~~g~l~~ttd~ 78 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNV----------MPIYEPGLDALVASNVKAGRLSFTTDL 78 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTC----------CSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCC----------CCccCCCHHHHHHhhcccCCEEEECCH
Confidence 4799999999999999999999999999999999887753210 0000001111 12468889998
Q ss_pred -ccccCCCEEEEecCCChH---------HHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhcc--CCCceeeccc-
Q 008509 222 -SEFKDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS--SQDRIIGAHF- 285 (563)
Q Consensus 222 -~~l~~aDlVieav~e~~~---------~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~--~~~r~ig~hf- 285 (563)
+++++||+||.|||...+ ..+++++++.+.++++++|++ .||+++. ++.+.+. .+. ...+.
T Consensus 79 ~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~-~STv~pgtt~~l~~~l~e~~~~--~d~~v~ 155 (446)
T 4a7p_A 79 AEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVT-KSTVPVGTGDEVERIIAEVAPN--SGAKVV 155 (446)
T ss_dssp HHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEE-CSCCCTTHHHHHHHHHHHHSTT--SCCEEE
T ss_pred HHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCCCchHHHHHHHHHHHhCCC--CCceEE
Confidence 588999999999987653 467788899999999998876 4466543 3333221 111 11111
Q ss_pred CCCCCCCCeE---------EEEeCCCCCHHHHHHHHHHHHHhCCc---eEEecCcch----hhhHHHH----HHHHHHHH
Q 008509 286 FSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKV---PVVVGNCTG----FAVNRAF----FPYSQSAR 345 (563)
Q Consensus 286 ~~P~~~~~lv---------Eiv~~~~t~~~~~~~~~~l~~~lGk~---~v~~~d~~G----fi~nRl~----~~~~~Ea~ 345 (563)
++|....+.- -++.+. .++++.+.+++++..+++. ++++.+..+ .+++..+ ..++||+.
T Consensus 156 ~~Pe~a~eG~a~~d~~~p~~ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~ 234 (446)
T 4a7p_A 156 SNPEFLREGAAIEDFKRPDRVVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIA 234 (446)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCcccccccchhhhccCCCEEEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2343221111 233331 3578999999999988875 577655322 2344443 35689998
Q ss_pred HHHHC-CCCHHHHHHHH
Q 008509 346 LLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 346 ~l~~~-G~~~~~ID~a~ 361 (563)
.+.+. |++++++=.++
T Consensus 235 ~l~~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 235 DLCEQVGADVQEVSRGI 251 (446)
T ss_dssp HHHHHTTCCHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHH
Confidence 87765 99999998888
No 53
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.47 E-value=3e-13 Score=144.63 Aligned_cols=201 Identities=16% Similarity=0.176 Sum_probs=136.9
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCC--CHHHHHhhh-----cCeee
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL--TQDKANNAL-----KMLKG 217 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~--~~~~~~~~~-----~~i~~ 217 (563)
++||+|||+|.||..+|..|+++ |++|++||+++++++... +|.. .....+..+ .++..
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~------------~g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWN------------SPTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT------------SSSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHh------------CCCCCcCCCCHHHHHHHhhcCCEEE
Confidence 57999999999999999999999 899999999999877632 1111 010111111 24677
Q ss_pred ecCc-ccccCCCEEEEecCCChHH-------------HHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhccCCCce
Q 008509 218 VLDY-SEFKDVDMVIEAVIESVPL-------------KQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRI 280 (563)
Q Consensus 218 ~~~~-~~l~~aDlVieav~e~~~~-------------k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~~~~r~ 280 (563)
++++ +++++||+||.|||...+. ..++++++.+.++++++|+. +|++++. ++++.+.... .
T Consensus 73 t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~g~~~~l~~~l~~~~-~ 150 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTE-KSTVPVRAAESIRRIFDANT-K 150 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEE-CSCCCTTHHHHHHHHHHHTC-C
T ss_pred ECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEE-CCcCCchHHHHHHHHHHHhC-C
Confidence 7786 4789999999999876543 34677788888999988754 4454433 3444432211 1
Q ss_pred eecc---cCCCCCCCCeEE---------E-EeCCC--CCHHHHHHHHHHHHHh-CCceEEecC-----cchhhhHHHH--
Q 008509 281 IGAH---FFSPAHVMPLLE---------I-VRTER--TSAQVILDLMTVGKII-KKVPVVVGN-----CTGFAVNRAF-- 337 (563)
Q Consensus 281 ig~h---f~~P~~~~~lvE---------i-v~~~~--t~~~~~~~~~~l~~~l-Gk~~v~~~d-----~~Gfi~nRl~-- 337 (563)
.+.+ .++|....+... + +.++. ++++..+.+.++++.+ |+.++++.+ ..+++.|.++
T Consensus 151 ~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~ 230 (467)
T 2q3e_A 151 PNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQ 230 (467)
T ss_dssp TTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHH
Confidence 1112 245554433322 3 34433 3788999999999998 777888754 2446677654
Q ss_pred -HHHHHHHHHHHHC-CCCHHHHHHHH
Q 008509 338 -FPYSQSARLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 338 -~~~~~Ea~~l~~~-G~~~~~ID~a~ 361 (563)
.+++||+..+.+. |++++++..++
T Consensus 231 ~ia~~nE~~~l~~~~Gid~~~v~~~~ 256 (467)
T 2q3e_A 231 RISSINSISALCEATGADVEEVATAI 256 (467)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 4678999988876 89999999998
No 54
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.47 E-value=1.7e-12 Score=129.40 Aligned_cols=155 Identities=15% Similarity=0.153 Sum_probs=116.4
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 223 (563)
|++|+|||+|.||.++|..|+.+|+ +|++||++++.++.+. +.|.. ...++++ +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~ 58 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGII-----------DEGTTSIAKV 58 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGG
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-----------HCCCc-----------ccccCCHHHH
Confidence 3689999999999999999999999 9999999998766532 22321 0124455 56
Q ss_pred cc-CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhhhccCCCceeecccCCCCC----------
Q 008509 224 FK-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH---------- 290 (563)
Q Consensus 224 l~-~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~--i~~la~~~~~~~r~ig~hf~~P~~---------- 290 (563)
++ +||+||.|+|.+. ..+++.++.+.++++++|++.+++.. ...+.+.+.. ++++.|++.++.
T Consensus 59 ~~~~aDvVilavp~~~--~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~ 134 (281)
T 2g5c_A 59 EDFSPDFVMLSSPVRT--FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDN 134 (281)
T ss_dssp GGTCCSEEEECSCHHH--HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSS
T ss_pred hcCCCCEEEEcCCHHH--HHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhH
Confidence 78 9999999999763 44788888888999998876444322 3445555532 488888866432
Q ss_pred --CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecC
Q 008509 291 --VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 327 (563)
Q Consensus 291 --~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d 327 (563)
....+.++++..++++..+.+.+++..+|..++++.+
T Consensus 135 l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 173 (281)
T 2g5c_A 135 LYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 173 (281)
T ss_dssp TTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred HhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3455778887788999999999999999998888864
No 55
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.47 E-value=7.9e-13 Score=138.35 Aligned_cols=196 Identities=16% Similarity=0.202 Sum_probs=129.6
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhh----hcCeeeecCc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY 221 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~----~~~i~~~~~~ 221 (563)
.++||+|||+|.||.++|..|++ |++|++||+++++++...+.. ..+.+...+.. ..+++.++|+
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~----------~~i~e~~l~~ll~~~~~~l~~ttd~ 103 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI----------SPIVDKEIQEYLAEKPLNFRATTDK 103 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC----------CccccccHHHHHhhccCCeEEEcCH
Confidence 45799999999999999999998 999999999999988754211 01111122221 1367888887
Q ss_pred -ccccCCCEEEEecCCChH---------HHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhccCCCceeecccCCC
Q 008509 222 -SEFKDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSP 288 (563)
Q Consensus 222 -~~l~~aDlVieav~e~~~---------~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~~~~r~ig~hf~~P 288 (563)
+++++||+||+|||++.+ ...++.+.+.+ ++++++|+. .||+++. ++++.+.. . ++. |+|
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~-~STv~pgtt~~l~~~l~~--~--~v~-~sP 176 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII-KSTIPVGFTRDIKERLGI--D--NVI-FSP 176 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE-CSCCCTTHHHHHHHHHTC--C--CEE-ECC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE-eCCCChHHHHHHHHHHhh--c--cEe-ecC
Confidence 688999999999998742 34567788888 889988764 5566543 45544432 1 232 266
Q ss_pred CCCCCe------E---EEEeCCCCCHHHHHHHHHHHHH--hCC-ceEEecCc-ch---hhhHHHH----HHHHHHHHHHH
Q 008509 289 AHVMPL------L---EIVRTERTSAQVILDLMTVGKI--IKK-VPVVVGNC-TG---FAVNRAF----FPYSQSARLLV 348 (563)
Q Consensus 289 ~~~~~l------v---Eiv~~~~t~~~~~~~~~~l~~~--lGk-~~v~~~d~-~G---fi~nRl~----~~~~~Ea~~l~ 348 (563)
....+. + -++.| .+++..+.+.+++.. +++ .++++.+. .+ .+++..+ .+++||+..+.
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG--~~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIG--ERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEES--SCSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEec--CCHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 653321 1 23444 245677888888876 443 35555431 22 2334443 35689998877
Q ss_pred HC-CCCHHHHHHHH
Q 008509 349 SL-GVDVFRIDSAI 361 (563)
Q Consensus 349 ~~-G~~~~~ID~a~ 361 (563)
+. |++++++=+++
T Consensus 255 e~~GiD~~~v~~~~ 268 (432)
T 3pid_A 255 ESQGLNSKQIIEGV 268 (432)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 65 99999888887
No 56
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.46 E-value=1.6e-13 Score=137.83 Aligned_cols=183 Identities=17% Similarity=0.163 Sum_probs=127.8
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
+++|+|||+|.||..+|..|++.|++|++|| ++++++... +.| +..++++ +.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELL-----------SLG-------------AVNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHH-----------TTT-------------CBCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHH-----------HcC-------------CcccCCHHHHHh
Confidence 3689999999999999999999999999999 887665432 112 2233444 4578
Q ss_pred CCCEEEEecCCChHHHHHHHH--HHHhhCCCCeEEEecCCCCC--HHHHhhhccCCCceeecccCCCC-C-------CCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPA-H-------VMP 293 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~--~l~~~~~~~~ii~sntS~l~--i~~la~~~~~~~r~ig~hf~~P~-~-------~~~ 293 (563)
+||+||.|+|.+.+++..+.. ++.+.++++++|++.+++.+ ..++.+.+... |.||++.| . ...
T Consensus 58 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g~ 133 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREGT 133 (295)
T ss_dssp TCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHTC
T ss_pred cCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcCC
Confidence 999999999987665543332 67777889998887665533 34566655431 55655432 1 124
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecC-cch----hhhHHH---HHHHHHHHHHHHHC-CCCHHHHHHHH
Q 008509 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 294 lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d-~~G----fi~nRl---~~~~~~Ea~~l~~~-G~~~~~ID~a~ 361 (563)
+..++.+ +++.++.+.++++.+|+.++++++ ..+ ++.|.+ +...++|+..+.+. |+++++++.++
T Consensus 134 ~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 134 LSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp EEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4545544 788999999999999998888854 334 233432 23467899887754 89999998887
No 57
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=99.46 E-value=7.7e-14 Score=137.10 Aligned_cols=97 Identities=21% Similarity=0.192 Sum_probs=90.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.+.+++++++..+ +
T Consensus 155 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 198 (254)
T 3hrx_A 155 LLLLSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGP------------------------------------T 198 (254)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HhhcCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccc------------------------------------h
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.+...+|++++.+...+++++++.|...+..++.|+|++|++.+|++||+++-
T Consensus 199 ~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f 251 (254)
T 3hrx_A 199 RAYALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRF 251 (254)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCC
Confidence 58888999999999999999999999999999999999999999999997643
No 58
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.46 E-value=1e-12 Score=137.84 Aligned_cols=196 Identities=14% Similarity=0.108 Sum_probs=130.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH--------HHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~--------i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
.|..|||+|.||..+|.+|+++||+|++||+++++++...+. +...+.+.+. ..++.+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~------------~g~l~~tt 79 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLS------------SGKLKVST 79 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH------------TTCEEEES
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcc------------cCceEEeC
Confidence 589999999999999999999999999999999998875421 1111111111 23577777
Q ss_pred CcccccCCCEEEEecCCChH----------HHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhc-c-CCCce-eec
Q 008509 220 DYSEFKDVDMVIEAVIESVP----------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKT-S-SQDRI-IGA 283 (563)
Q Consensus 220 ~~~~l~~aDlVieav~e~~~----------~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~-~-~~~r~-ig~ 283 (563)
| +++||+||.|||...+ ......+.+.+.++++++|+. .||+++. ++...+ . ...++ ...
T Consensus 80 d---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~~g~~~~~d~ 155 (431)
T 3ojo_A 80 T---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIENLGFTIGEDI 155 (431)
T ss_dssp S---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHTTTCCBTTTE
T ss_pred c---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHHcCCCcCCCe
Confidence 6 4589999999997653 234556788999999998764 4566654 333221 1 11110 001
Q ss_pred cc-CCCCCCCCe---------EEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCc-ch---hhhHHHH----HHHHHHHH
Q 008509 284 HF-FSPAHVMPL---------LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TG---FAVNRAF----FPYSQSAR 345 (563)
Q Consensus 284 hf-~~P~~~~~l---------vEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~-~G---fi~nRl~----~~~~~Ea~ 345 (563)
++ ++|....+. --|+.| .+++..+.++++++.+++.++++.+. .+ .++|.++ .+++||+.
T Consensus 156 ~v~~~Pe~~~~G~A~~~~~~p~~Iv~G--~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~ 233 (431)
T 3ojo_A 156 YLVHCPERVLPGKILEELVHNNRIIGG--VTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELT 233 (431)
T ss_dssp EEEECCCCCCTTSHHHHHHHSCEEEEE--SSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCcchhhcccCCCEEEEe--CCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 345432211 124444 26899999999999999888877542 22 3445554 35689998
Q ss_pred HHHHC-CCCHHHHHHHH
Q 008509 346 LLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 346 ~l~~~-G~~~~~ID~a~ 361 (563)
.+.+. |+++.++=+++
T Consensus 234 ~l~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 234 KICNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHHHTTCCHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHH
Confidence 87765 99999988887
No 59
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.46 E-value=7.8e-13 Score=133.86 Aligned_cols=168 Identities=14% Similarity=0.166 Sum_probs=112.7
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc---c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS---E 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~---~ 223 (563)
++||+|||+|.||..+|..|+++|++|++||++++.++...+ .|............++..+++.+ .
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK-----------NGLIADFNGEEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------HCEEEEETTEEEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh-----------CCEEEEeCCCeeEecceeecchhhccc
Confidence 468999999999999999999999999999999987765421 12100000000011222233222 3
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhhhccCCCcee-ecccCCCCCCC---------
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHVM--------- 292 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i-~~la~~~~~~~r~i-g~hf~~P~~~~--------- 292 (563)
++++|+||.|+|.+ ...+++.++.+.++++++|++.+++++. ..+++.+. +.+++ |.+++..+..+
T Consensus 72 ~~~~d~vi~~v~~~--~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~-~~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTKAQ--QLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVP-KENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSCHH--HHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSC-GGGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEeccc--cHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcC-CccEEEEEeeeeeEEcCCCEEEEecC
Confidence 34999999999965 3568889999999999999988888776 45666554 33677 44433211111
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCc
Q 008509 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 328 (563)
Q Consensus 293 ~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~ 328 (563)
..+.++....++++..+.+.++++..|..+.+..|.
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~ 184 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNV 184 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhH
Confidence 223344445567889999999999999887777664
No 60
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=99.46 E-value=8e-14 Score=137.12 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=90.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.+.+++++++..+ +
T Consensus 159 llltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 202 (258)
T 4fzw_A 159 MVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHS------------------------------------P 202 (258)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.+...+|++++.+...+++++++.|.+.|..++.|+|+++++.+|++||++.-
T Consensus 203 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f 255 (258)
T 4fzw_A 203 LALQAAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDF 255 (258)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCC
Confidence 58889999999999999999999999999999999999999999999987643
No 61
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.46 E-value=1.5e-14 Score=144.62 Aligned_cols=88 Identities=17% Similarity=0.197 Sum_probs=79.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhC-CCCCCC
Q 008509 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPS 536 (563)
Q Consensus 458 ~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~-~~~~p~ 536 (563)
.+++++||++.++++||++++++|++ ++++||.++..|+|||+ |||+++|.+|+|+++++++. ..+ +++.|+
T Consensus 188 ~~g~i~nr~~~~~~~ea~~l~~~g~~-~~~~id~~~~~~~g~~~---Gp~~~~D~~Gld~~~~~~~~---~~~~~~~~~~ 260 (283)
T 4e12_A 188 KAGYVLNSLLVPLLDAAAELLVDGIA-DPETIDKTWRIGTGAPK---GPFEIFDIVGLTTAYNISSV---SGPKQREFAA 260 (283)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSC-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHT---SCHHHHHHHH
T ss_pred CCCEEehHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhccCCCc---CHHHHHHhccHHHHHHHHhc---cccCcccCch
Confidence 57899999999999999999999999 99999999999999999 99999999999999999883 222 257788
Q ss_pred HHHHHHHH-------cCCCccCC
Q 008509 537 RFLEERAT-------KGIPLSAP 552 (563)
Q Consensus 537 ~~l~~~~~-------~g~~f~~~ 552 (563)
+++++|++ +|+|||+|
T Consensus 261 ~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 261 YLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHHHCCCCceeCCeEeecC
Confidence 99999996 58999998
No 62
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.45 E-value=3.9e-12 Score=134.95 Aligned_cols=201 Identities=14% Similarity=0.130 Sum_probs=132.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHh------hhcCeeeecCc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN------ALKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~------~~~~i~~~~~~ 221 (563)
+||+|||+|.||..+|..|+++|++|++||+++++++...+.. ..+.....+. ...++..++|+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~----------~~i~e~gl~~~l~~~~~~~~l~~t~d~ 72 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGT----------IPIYEPGLEKMIARNVKAGRLRFGTEI 72 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTC----------SCCCSTTHHHHHHHHHHTTSEEEESCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCC----------CcccCCCHHHHHHhhcccCcEEEECCH
Confidence 5899999999999999999999999999999999887754210 0000000111 02467888888
Q ss_pred c-cccCCCEEEEecCCChH--------HHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhccC--CCceeeccc--
Q 008509 222 S-EFKDVDMVIEAVIESVP--------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS--QDRIIGAHF-- 285 (563)
Q Consensus 222 ~-~l~~aDlVieav~e~~~--------~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~~--~~r~ig~hf-- 285 (563)
+ ++++||+||.|||...+ ...++++++.++++++++|++.+ ++++. ++++.+.. +...++..|
T Consensus 73 ~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v 151 (450)
T 3gg2_A 73 EQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDI 151 (450)
T ss_dssp HHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeE
Confidence 5 58999999999997742 56788899999999999887644 45433 33332211 000001111
Q ss_pred -CCCCCCCC--e--------EEEEeCCCCCHHHHHHHHHHHHHhCC--ceEEecCcch-----hhhHHHH---HHHHHHH
Q 008509 286 -FSPAHVMP--L--------LEIVRTERTSAQVILDLMTVGKIIKK--VPVVVGNCTG-----FAVNRAF---FPYSQSA 344 (563)
Q Consensus 286 -~~P~~~~~--l--------vEiv~~~~t~~~~~~~~~~l~~~lGk--~~v~~~d~~G-----fi~nRl~---~~~~~Ea 344 (563)
++|....+ . --++.+ .+++..+.++++++.+++ .++++.+..+ ++.|-+. ..++||+
T Consensus 152 ~~~Pe~a~eG~~~~~~~~p~~ivvG~--~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~ 229 (450)
T 3gg2_A 152 ASNPEFLKEGNAIDDFMKPDRVVVGV--DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDV 229 (450)
T ss_dssp EECCCCCCTTSHHHHHHSCSCEEEEE--SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EechhhhcccchhhhccCCCEEEEEc--CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24443222 1 123333 368899999999999887 3666655322 3334332 3568999
Q ss_pred HHHHHC-CCCHHHHHHHH
Q 008509 345 RLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 345 ~~l~~~-G~~~~~ID~a~ 361 (563)
..+.+. |++++++-.++
T Consensus 230 ~~l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 230 ANLCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHH
Confidence 888865 99999998888
No 63
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=99.44 E-value=1.4e-13 Score=136.42 Aligned_cols=97 Identities=19% Similarity=0.139 Sum_probs=88.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||+++|++.|.++|++++..+ +
T Consensus 175 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 218 (274)
T 4fzw_C 175 LALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQP------------------------------------T 218 (274)
T ss_dssp HHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||+++-
T Consensus 219 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P~f 271 (274)
T 4fzw_C 219 FGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQF 271 (274)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCCCC
T ss_pred HHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCC
Confidence 58889999999999999999999999999999999999999999999987643
No 64
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.43 E-value=1.3e-12 Score=134.37 Aligned_cols=168 Identities=14% Similarity=0.094 Sum_probs=115.9
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
..+||+|||+|.||+++|..|+++|++|++||++++.++...+.- .....+.. .....++..++|+ +++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~-------~~~~~l~g---~~l~~~i~~t~d~~ea~ 97 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEG-------VNNRYLPN---YPFPETLKAYCDLKASL 97 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHS-------SBTTTBTT---CCCCTTEEEESCHHHHH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC-------CCcccCCC---CccCCCeEEECCHHHHH
Confidence 346899999999999999999999999999999998876643210 00000000 0112357777887 578
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH------HHhhhccCCCceeecccCCCCC------CC
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN------IVGEKTSSQDRIIGAHFFSPAH------VM 292 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~------~la~~~~~~~r~ig~hf~~P~~------~~ 292 (563)
++||+||.|||.+ ..+++++++.+++++++++++.++++.+. .+.+.++. ..+.- ...|.. ..
T Consensus 98 ~~aDvVilaVp~~--~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~v--lsgP~~a~ev~~g~ 172 (356)
T 3k96_A 98 EGVTDILIVVPSF--AFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMAV--ISGPSLATEVAANL 172 (356)
T ss_dssp TTCCEEEECCCHH--HHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEEE--EESSCCHHHHHTTC
T ss_pred hcCCEEEECCCHH--HHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEEE--EECccHHHHHHcCC
Confidence 9999999999965 57889999999999999999988877664 34444431 11110 112321 22
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch
Q 008509 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 330 (563)
Q Consensus 293 ~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G 330 (563)
+..-++.+ .+++..+.+++++...+..+.+..|..|
T Consensus 173 pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g 208 (356)
T 3k96_A 173 PTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIG 208 (356)
T ss_dssp CEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHH
T ss_pred CeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHH
Confidence 33333333 4788999999999988988888777655
No 65
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.1e-12 Score=140.75 Aligned_cols=190 Identities=13% Similarity=0.073 Sum_probs=132.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l~~ 226 (563)
.+|+|||+|.||.+||..|+++|++|++||+++++++...+. ... . ..+..+++++ .+++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~----------~~~---~------~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLAN----------EAK---G------KSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHT----------TTT---T------SSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcc----------ccc---C------CCeEEeCCHHHHHhc
Confidence 589999999999999999999999999999999987764310 000 0 1355566663 3444
Q ss_pred ---CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhcc-CCCceeecccCCCCC---CCCeEEE
Q 008509 227 ---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 297 (563)
Q Consensus 227 ---aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~-~~~r~ig~hf~~P~~---~~~lvEi 297 (563)
||+||.|||....++ +++.++.+.++++++|++.+++.+. .++++.+. ...+++++..+.++. ..+ .+
T Consensus 72 l~~aDvVil~Vp~~~~v~-~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~--~i 148 (497)
T 2p4q_A 72 LKRPRKVMLLVKAGAPVD-ALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP--SL 148 (497)
T ss_dssp SCSSCEEEECCCSSHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred CCCCCEEEEEcCChHHHH-HHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC--eE
Confidence 999999999876554 5668899999999998876666543 34555443 223444443232221 122 24
Q ss_pred EeCCCCCHHHHHHHHHHHHHhCCc------eEEec-Ccchh----hhHHHH---HHHHHHHHHHHHC--CCCHHHHHHHH
Q 008509 298 VRTERTSAQVILDLMTVGKIIKKV------PVVVG-NCTGF----AVNRAF---FPYSQSARLLVSL--GVDVFRIDSAI 361 (563)
Q Consensus 298 v~~~~t~~~~~~~~~~l~~~lGk~------~v~~~-d~~Gf----i~nRl~---~~~~~Ea~~l~~~--G~~~~~ID~a~ 361 (563)
+.+ .+++.++.++++++.+|+. +.+++ ...|. +.|.+. ...++|++.+.+. |++++++..++
T Consensus 149 m~g--g~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 149 MPG--GSEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVF 226 (497)
T ss_dssp EEE--ECGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred Eec--CCHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHH
Confidence 443 2678899999999999987 56664 34443 346554 4568899988875 89999998887
No 66
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.42 E-value=6.4e-13 Score=141.32 Aligned_cols=192 Identities=13% Similarity=0.048 Sum_probs=130.4
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc--
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-- 223 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-- 223 (563)
.+++|+|||+|.||.+||..|+++|++|++||+++++++... +.+.. -.++..+.++++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~-----------~~g~~--------g~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-----------ANEAK--------GTKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-----------HTTTT--------TSSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------hcccC--------CCceeccCCHHHHH
Confidence 357899999999999999999999999999999999877643 22110 013444555532
Q ss_pred --ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhhhcc-CCCceeecccCCCC---CCCCeE
Q 008509 224 --FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 295 (563)
Q Consensus 224 --l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~--~la~~~~-~~~r~ig~hf~~P~---~~~~lv 295 (563)
++++|+||.|||....+ .+++.++.+.++++.+|++.+++.+.+ ++++.+. +..+|+++..+..+ ...+ .
T Consensus 64 ~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-~ 141 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQAV-DDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-S 141 (484)
T ss_dssp HTBCSSCEEEECSCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-E
T ss_pred hhccCCCEEEEecCChHHH-HHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC-e
Confidence 34699999999987655 457789999999999998877666533 3444332 22334443211111 1233 2
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCce-------EEecC-cchh---hhHHH-H---HHHHHHHHHHHHC--CCCHHHHH
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTGF---AVNRA-F---FPYSQSARLLVSL--GVDVFRID 358 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~~-------v~~~d-~~Gf---i~nRl-~---~~~~~Ea~~l~~~--G~~~~~ID 358 (563)
-++.+ ++++++.++++++.+|..+ +++++ ..|. ++|.. . ...++|++.+.+. |++++++-
T Consensus 142 im~GG---~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~ 218 (484)
T 4gwg_A 142 LMPGG---NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMA 218 (484)
T ss_dssp EEEEE---CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred eecCC---CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 23344 6789999999999999877 66653 2332 33333 2 3457899998875 88999998
Q ss_pred HHH
Q 008509 359 SAI 361 (563)
Q Consensus 359 ~a~ 361 (563)
.++
T Consensus 219 ~v~ 221 (484)
T 4gwg_A 219 QAF 221 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 67
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.42 E-value=2.4e-12 Score=126.91 Aligned_cols=147 Identities=12% Similarity=0.093 Sum_probs=109.7
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCC----CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 221 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G----~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 221 (563)
.+||+|||+|.||++||..|+++| ++|++||+++++ .| +..+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~ 53 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNE 53 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHH
Confidence 358999999999999999999999 799999998764 11 2334444
Q ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCCCC-eEEEEeC
Q 008509 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRT 300 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~~~-lvEiv~~ 300 (563)
+.+++||+||.|+|.+ ...+++.++.+.+ +++++++.+++++++.+.+.+....+++..-+..|..... +..++++
T Consensus 54 ~~~~~~D~vi~~v~~~--~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~ 130 (262)
T 2rcy_A 54 ELARHCDIIVCAVKPD--IAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSN 130 (262)
T ss_dssp HHHHHCSEEEECSCTT--THHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEEC
T ss_pred HHHhcCCEEEEEeCHH--HHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeC
Confidence 4678999999999965 4668888888887 5777888899999988887765432343221222333333 3335567
Q ss_pred CCCCHHHHHHHHHHHHHhCCceEEecC
Q 008509 301 ERTSAQVILDLMTVGKIIKKVPVVVGN 327 (563)
Q Consensus 301 ~~t~~~~~~~~~~l~~~lGk~~v~~~d 327 (563)
+.++++.++.+.++++.+|+ ++++.+
T Consensus 131 ~~~~~~~~~~~~~ll~~~G~-~~~~~~ 156 (262)
T 2rcy_A 131 KNVNSTDKKYVNDIFNSCGI-IHEIKE 156 (262)
T ss_dssp TTCCHHHHHHHHHHHHTSEE-EEECCG
T ss_pred CCCCHHHHHHHHHHHHhCCC-EEEeCH
Confidence 77899999999999999997 777753
No 68
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.41 E-value=5.1e-13 Score=136.02 Aligned_cols=122 Identities=17% Similarity=0.246 Sum_probs=91.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+||+|||+|.||.++|..++.+|+ +|++||++++.++.....+.+..... ....++..++|++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~------------~~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALI------------GSPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHH------------TCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhcc------------CCCCEEEECCCHHHHCC
Confidence 589999999999999999999999 99999999988876433333332110 11246888889999999
Q ss_pred CCEEEEec--CC------------ChHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhhhcc--CCCceeec
Q 008509 227 VDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIGA 283 (563)
Q Consensus 227 aDlVieav--~e------------~~~~k~~v~~~l~~~~~~~~ii--~sntS~l~i~~la~~~~--~~~r~ig~ 283 (563)
||+||+++ |+ +..+++++++++.+++ |++++ +||++.+. +.++.... .|.|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 54 5577999999999998 55654 57766543 44443333 57788887
No 69
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.41 E-value=6.4e-13 Score=127.68 Aligned_cols=154 Identities=18% Similarity=0.225 Sum_probs=111.0
Q ss_pred ccceeEEEEcCCcchHHHHHHHHhCCCeEEE-EeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 145 RGVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~iA~~la~~G~~V~l-~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
++++||+|||+|.||..+|..|+++|++|++ +|++++++++..+. .|. ....++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~----------~g~------------~~~~~~~~~ 78 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDR----------FGA------------SVKAVELKD 78 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHH----------HTT------------TEEECCHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHH----------hCC------------CcccChHHH
Confidence 3467999999999999999999999999999 99999887653221 111 112344567
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC--------------CHHHHhhhccCCCceeecccCCCC
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--------------DLNIVGEKTSSQDRIIGAHFFSPA 289 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l--------------~i~~la~~~~~~~r~ig~hf~~P~ 289 (563)
+.++|+||.|+|. ....+++.++.+ + ++++|++.+.++ +.+.+++.++ ..+++..+++.|.
T Consensus 79 ~~~aDvVilavp~--~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~ 153 (220)
T 4huj_A 79 ALQADVVILAVPY--DSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPA 153 (220)
T ss_dssp HTTSSEEEEESCG--GGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCH
T ss_pred HhcCCEEEEeCCh--HHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCH
Confidence 8999999999984 456677777766 4 577888887766 4566777765 3466655443333
Q ss_pred CCC---------CeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecC
Q 008509 290 HVM---------PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 327 (563)
Q Consensus 290 ~~~---------~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d 327 (563)
... +...++.+ .+++..+.+.++++.+|+.++.+++
T Consensus 154 ~v~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 154 AVLAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp HHHTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHhhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeCC
Confidence 211 23334444 4689999999999999999999865
No 70
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=99.40 E-value=3.5e-13 Score=133.12 Aligned_cols=96 Identities=18% Similarity=0.214 Sum_probs=89.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 166 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 209 (265)
T 3kqf_A 166 LIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNG------------------------------------P 209 (265)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|+..+|++++.+...+++++++.|.+.|..++.|+|+++++.+|++||++.
T Consensus 210 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 261 (265)
T 3kqf_A 210 IAVRLAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPM 261 (265)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 6889999999999999999999999999999999999999999999998754
No 71
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=99.39 E-value=3.4e-13 Score=132.98 Aligned_cols=97 Identities=24% Similarity=0.302 Sum_probs=89.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 164 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 207 (263)
T 3moy_A 164 LCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMS------------------------------------R 207 (263)
T ss_dssp HHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|+..+|++++.+...+++++++.|.+.|..++.|+|+++++.+|++||++.-
T Consensus 208 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f 260 (263)
T 3moy_A 208 PAGRAVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEF 260 (263)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCC
Confidence 68999999999999889999999999999999999999999999999987543
No 72
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=99.39 E-value=4e-13 Score=133.36 Aligned_cols=96 Identities=19% Similarity=0.320 Sum_probs=89.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 179 l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 222 (278)
T 3h81_A 179 LILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMS------------------------------------A 222 (278)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|+..+|++++.+...+++++++.|.+.|..++.|+|+++++.+|++||++.
T Consensus 223 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~ 274 (278)
T 3h81_A 223 SAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQ 274 (278)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 6899999999999988999999999999999999999999999999998754
No 73
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.39 E-value=3.9e-12 Score=136.33 Aligned_cols=200 Identities=14% Similarity=0.165 Sum_probs=132.2
Q ss_pred cceeEEEEcCCcchHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCC--CHHHHHhh-----hcCee
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL--TQDKANNA-----LKMLK 216 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~--~~~~~~~~-----~~~i~ 216 (563)
+++||+|||+|.||..+|..|+++ |++|++||+++++++... .+.. .....+.. ..++.
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~------------~g~~~i~e~gl~~~~~~~~~~~l~ 75 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWN------------SDKLPIYEPGLDEIVFAARGRNLF 75 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT------------SSSCSSCCTTHHHHHHHHBTTTEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHH------------CCCCCcCCCCHHHHHHHhhcCCEE
Confidence 457999999999999999999998 799999999999877642 1211 00011111 12577
Q ss_pred eecCc-ccccCCCEEEEecCCChH-------------HHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhccC--C
Q 008509 217 GVLDY-SEFKDVDMVIEAVIESVP-------------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS--Q 277 (563)
Q Consensus 217 ~~~~~-~~l~~aDlVieav~e~~~-------------~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~~--~ 277 (563)
.++++ +++++||+||.|||.... ...++++++.++++++++|+. .||+++. .+++.+.. .
T Consensus 76 ~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~gt~~~l~~~l~~~~~ 154 (481)
T 2o3j_A 76 FSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVE-KSTVPVKAAESIGCILREAQK 154 (481)
T ss_dssp EESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHTC
T ss_pred EECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEE-CCCCCCCHHHHHHHHHHHhhC
Confidence 78886 678999999999987542 356778899999999998874 3444432 33333321 1
Q ss_pred ----Cc-eeecccCCCCCCCCeE---------EEE-eCCCC--CHHHHHHHHHHHHHhCC-ceEEecCc-----chhhhH
Q 008509 278 ----DR-IIGAHFFSPAHVMPLL---------EIV-RTERT--SAQVILDLMTVGKIIKK-VPVVVGNC-----TGFAVN 334 (563)
Q Consensus 278 ----~r-~ig~hf~~P~~~~~lv---------Eiv-~~~~t--~~~~~~~~~~l~~~lGk-~~v~~~d~-----~Gfi~n 334 (563)
.. .+. ++|....+.. .++ .+... ++++.+.+.++++.+++ .++++.+. ..++.|
T Consensus 155 ~~~~~d~~v~---~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N 231 (481)
T 2o3j_A 155 NNENLKFQVL---SNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVAN 231 (481)
T ss_dssp ----CCEEEE---ECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHH
T ss_pred cCcCCceEEE---eCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHH
Confidence 11 122 2343222111 233 33221 23688899999999996 77777542 234455
Q ss_pred HH---HHHHHHHHHHHHHC-CCCHHHHHHHH
Q 008509 335 RA---FFPYSQSARLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 335 Rl---~~~~~~Ea~~l~~~-G~~~~~ID~a~ 361 (563)
-+ ..+++||+..+.+. |++++++..++
T Consensus 232 ~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 232 AFLAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 43 34678999888876 99999999888
No 74
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.39 E-value=1.8e-12 Score=129.61 Aligned_cols=184 Identities=15% Similarity=0.066 Sum_probs=124.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
++|+|||+|.||..+|..|++ |++|++||+++++++...+ .|. ..++..+.+.++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~-----------~g~-------------~~~~~~~~~~~~ 56 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQE-----------EFG-------------SEAVPLERVAEA 56 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHH-----------HHC-------------CEECCGGGGGGC
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHH-----------CCC-------------cccCHHHHHhCC
Confidence 589999999999999999999 9999999999988765421 111 112222467899
Q ss_pred CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCCCCC---CCCeEEEEeCC
Q 008509 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFSPAH---VMPLLEIVRTE 301 (563)
Q Consensus 228 DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~P~~---~~~lvEiv~~~ 301 (563)
|+||.|+|.+..++ .++.++.+.++++++|++.++. .....+.+.+.. ..+++....+.++. ...+..++.
T Consensus 57 D~vi~~v~~~~~~~-~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~-- 133 (289)
T 2cvz_A 57 RVIFTCLPTTREVY-EVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLG-- 133 (289)
T ss_dssp SEEEECCSSHHHHH-HHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEE--
T ss_pred CEEEEeCCChHHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEEC--
Confidence 99999999775554 4668888888899988754333 223456665543 22444432111111 123333443
Q ss_pred CCCHHHHHHHHHHHHHhCCceEEecCc-chh----hhHHH---HHHHHHHHHHHHH-CCCCHHHHHHHH
Q 008509 302 RTSAQVILDLMTVGKIIKKVPVVVGNC-TGF----AVNRA---FFPYSQSARLLVS-LGVDVFRIDSAI 361 (563)
Q Consensus 302 ~t~~~~~~~~~~l~~~lGk~~v~~~d~-~Gf----i~nRl---~~~~~~Ea~~l~~-~G~~~~~ID~a~ 361 (563)
.+++.++.+.+++ .+|+.++++++. .+. +.|.+ +...++|+..+.+ .|++++++..++
T Consensus 134 -~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 200 (289)
T 2cvz_A 134 -GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVI 200 (289)
T ss_dssp -SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred -CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHH
Confidence 3788999999999 999988888653 332 23443 2456788888775 489999888887
No 75
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=99.39 E-value=2.7e-13 Score=134.36 Aligned_cols=98 Identities=13% Similarity=0.123 Sum_probs=90.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 170 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~------------------------------------p 213 (275)
T 3hin_A 170 MMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNA------------------------------------P 213 (275)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
.|...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||++...
T Consensus 214 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 267 (275)
T 3hin_A 214 LTNFAVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVR 267 (275)
T ss_dssp HHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 588899999999998999999999999999999999999999999999987553
No 76
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=99.39 E-value=4.9e-13 Score=131.28 Aligned_cols=97 Identities=20% Similarity=0.223 Sum_probs=89.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++.+.|.+++++++..+ +
T Consensus 157 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 200 (256)
T 3trr_A 157 LALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANG------------------------------------P 200 (256)
T ss_dssp HHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+++-
T Consensus 201 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 253 (256)
T 3trr_A 201 LAVAATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAPVW 253 (256)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 58889999999999999999999999999999999999999999999987543
No 77
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.39 E-value=6.3e-12 Score=134.44 Aligned_cols=191 Identities=14% Similarity=0.054 Sum_probs=132.3
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 224 (563)
.-++|+|||+|.||.+||..|+++|++|++||+++++++...+.. .+ ..+..+++++ .+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~---------~~-----------~gi~~~~s~~e~v 73 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN---------PG-----------KKLVPYYTVKEFV 73 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS---------TT-----------SCEEECSSHHHHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC---------CC-----------CCeEEeCCHHHHH
Confidence 346899999999999999999999999999999999877643210 00 1355566663 44
Q ss_pred cC---CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhcc-CCCceeecccCCCC---CCCCeE
Q 008509 225 KD---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPA---HVMPLL 295 (563)
Q Consensus 225 ~~---aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~-~~~r~ig~hf~~P~---~~~~lv 295 (563)
++ ||+||.|||....+ ++++.++.+.++++++|++.+++.+. ..+.+.+. ...+++++..+..+ ...+
T Consensus 74 ~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-- 150 (480)
T 2zyd_A 74 ESLETPRRILLMVKAGAGT-DAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP-- 150 (480)
T ss_dssp HTBCSSCEEEECSCSSSHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--
T ss_pred hCCCCCCEEEEECCCHHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC--
Confidence 54 99999999986554 46778899999999998877766644 34555443 23345444222211 1233
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCc-------eEEecC-cchh----hhHHHH---HHHHHHHHHHHHC--CCCHHHHH
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTGF----AVNRAF---FPYSQSARLLVSL--GVDVFRID 358 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~-------~v~~~d-~~Gf----i~nRl~---~~~~~Ea~~l~~~--G~~~~~ID 358 (563)
.++.+ .+++..+.++++++.+|.. +.++++ ..|. +.|.+. ...+.|++.+... |++++++.
T Consensus 151 ~i~~g--g~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~ 228 (480)
T 2zyd_A 151 SIMPG--GQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELA 228 (480)
T ss_dssp EEEEE--SCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred eEEec--CCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 24444 2689999999999999987 556643 3332 345443 3567899988876 99999998
Q ss_pred HHH
Q 008509 359 SAI 361 (563)
Q Consensus 359 ~a~ 361 (563)
.++
T Consensus 229 ~l~ 231 (480)
T 2zyd_A 229 QTF 231 (480)
T ss_dssp HHH
T ss_pred HHH
Confidence 877
No 78
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=99.38 E-value=6.5e-13 Score=130.42 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=88.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|+|++++++.|.+++++++..+ +
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 199 (255)
T 3p5m_A 156 MAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGP------------------------------------T 199 (255)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|...+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||++.
T Consensus 200 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 251 (255)
T 3p5m_A 200 LAFGWTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPN 251 (255)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 5888999999999888999999999999999999999999999999998654
No 79
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=99.37 E-value=7.5e-13 Score=130.78 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=89.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 166 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 209 (265)
T 3swx_A 166 WMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQA------------------------------------P 209 (265)
T ss_dssp HHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5799999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|+..+|++++.+...+++++++.|...|..++.|+|+++++.+|++||++.
T Consensus 210 ~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 261 (265)
T 3swx_A 210 LGVQATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAE 261 (265)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCC
Confidence 5888999999999888999999999999999999999999999999998754
No 80
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=99.37 E-value=6.8e-13 Score=130.23 Aligned_cols=96 Identities=21% Similarity=0.206 Sum_probs=88.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 155 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 198 (254)
T 3gow_A 155 LLLLSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGP------------------------------------T 198 (254)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.+...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||++.
T Consensus 199 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 250 (254)
T 3gow_A 199 RAYALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPR 250 (254)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 5888999999999988999999999999999999999999999999988754
No 81
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=99.37 E-value=3.2e-13 Score=133.06 Aligned_cols=96 Identities=31% Similarity=0.434 Sum_probs=88.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 162 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 205 (261)
T 3pea_A 162 MMLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKS------------------------------------P 205 (261)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|+..+|++++.+...+++++++.|...|..++.|+|+++++.+|++||++.
T Consensus 206 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P~ 257 (261)
T 3pea_A 206 ATARAVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPS 257 (261)
T ss_dssp HHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 6889999999998888899999999999999999999999999999998754
No 82
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=99.37 E-value=5.3e-13 Score=131.89 Aligned_cols=98 Identities=11% Similarity=0.115 Sum_probs=89.5
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||+++|++.+.++|++++..+ +
T Consensus 162 llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 205 (268)
T 3i47_A 162 LFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNA------------------------------------P 205 (268)
T ss_dssp HHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchh-hHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 81 PQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~-~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
.|...+|++++.+...++++ .++.|.+.+..++.|+|+++++.+|++||++...
T Consensus 206 ~a~~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 260 (268)
T 3i47_A 206 EAVKNSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWN 260 (268)
T ss_dssp HHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCTTC
T ss_pred HHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 58889999999998888888 7899999999999999999999999999987554
No 83
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.37 E-value=4.5e-12 Score=127.54 Aligned_cols=138 Identities=16% Similarity=0.101 Sum_probs=106.1
Q ss_pred ceeEEEEc-CCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 147 VRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 147 ~~kv~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+++|+||| +|.||.+||..|+++|++|+++|++++. +..+.+.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~~ 64 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESILA 64 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHHT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHhc
Confidence 56899999 9999999999999999999999998641 0013467
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC--CHHHHhhhccCCCceeecccCCCCC----CCCeEEEEe
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSSQDRIIGAHFFSPAH----VMPLLEIVR 299 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l--~i~~la~~~~~~~r~ig~hf~~P~~----~~~lvEiv~ 299 (563)
+||+||.|||.+. ..+++.++.+.++++++|++.+|.. .+..+.+.. +.++++.||+.++. ....+.+++
T Consensus 65 ~aDvVilavp~~~--~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~~ 140 (298)
T 2pv7_A 65 NADVVIVSVPINL--TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRCD 140 (298)
T ss_dssp TCSEEEECSCGGG--HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEEE
T ss_pred CCCEEEEeCCHHH--HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEec
Confidence 8999999999765 6788899998899999887655432 233444443 57899999976443 233455555
Q ss_pred CCCCCHHHHHHHHHHHHHhCCceEEec
Q 008509 300 TERTSAQVILDLMTVGKIIKKVPVVVG 326 (563)
Q Consensus 300 ~~~t~~~~~~~~~~l~~~lGk~~v~~~ 326 (563)
+. +++.++.+.+++..+|..++++.
T Consensus 141 ~~--~~~~~~~v~~l~~~~G~~~~~~~ 165 (298)
T 2pv7_A 141 GR--FPERYEWLLEQIQIWGAKIYQTN 165 (298)
T ss_dssp EE--CGGGTHHHHHHHHHTTCEEEECC
T ss_pred CC--CHHHHHHHHHHHHHcCCEEEECC
Confidence 53 67889999999999999888875
No 84
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=99.37 E-value=8.4e-13 Score=130.42 Aligned_cols=96 Identities=19% Similarity=0.199 Sum_probs=88.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.++|++++..+ +
T Consensus 166 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 209 (265)
T 3rsi_A 166 MILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNG------------------------------------P 209 (265)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||++.
T Consensus 210 ~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 261 (265)
T 3rsi_A 210 LAVRNAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREAR 261 (265)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCC
Confidence 5888999999999888999999999999999999999999999999998754
No 85
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=99.36 E-value=7.9e-13 Score=130.51 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=89.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 166 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 209 (265)
T 3qxi_A 166 LALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANG------------------------------------P 209 (265)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.+...+++++++.|...|..++.|+|+++++.+|++||++.-
T Consensus 210 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 262 (265)
T 3qxi_A 210 LAVAATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPPRW 262 (265)
T ss_dssp HHHHHHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 58889999999998889999999999999999999999999999999987543
No 86
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=99.36 E-value=7.3e-13 Score=132.10 Aligned_cols=98 Identities=15% Similarity=0.120 Sum_probs=89.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||+++|++.|.++|++++..+ +
T Consensus 182 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 225 (286)
T 3myb_A 182 MLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKP------------------------------------R 225 (286)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
.|...+|++++.+...+++++++.|.+.|..++.|+++++++.+|++||++.-.
T Consensus 226 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~f~ 279 (286)
T 3myb_A 226 AAVAMGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPEWH 279 (286)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCC
Confidence 588899999999988899999999999999999999999999999999876543
No 87
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.36 E-value=9.9e-12 Score=118.44 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=113.4
Q ss_pred eeEEEEc-CCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
+||+||| +|.||..++..|+++|++|+++|+++++.+...+.+.. .+.. ..+.. +++ +.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~ 63 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAE 63 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHh
Confidence 3799999 99999999999999999999999999877654322111 1110 12332 334 4678
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--------------HHHHhhhccCCCceeecccCCCCC-
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPAH- 290 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~--------------i~~la~~~~~~~r~ig~hf~~P~~- 290 (563)
+||+||.|+|.+. .++++.++.+.++ ++++++.+++++ .+++++.+. ..+++..|...|..
T Consensus 64 ~~D~Vi~~~~~~~--~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~v~~~~~~~~~~ 139 (212)
T 1jay_A 64 ACDIAVLTIPWEH--AIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE-SEKVVSALHTIPAAR 139 (212)
T ss_dssp HCSEEEECSCHHH--HHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT-CSCEEECCTTCCHHH
T ss_pred cCCEEEEeCChhh--HHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC-CCeEEEEccchHHHH
Confidence 9999999999543 4577888877674 889988888766 577877765 36777665433221
Q ss_pred ------CCCeEEEEeCCCCCHHHHHHHHHHHHHh-CCceEEecC
Q 008509 291 ------VMPLLEIVRTERTSAQVILDLMTVGKII-KKVPVVVGN 327 (563)
Q Consensus 291 ------~~~lvEiv~~~~t~~~~~~~~~~l~~~l-Gk~~v~~~d 327 (563)
...+..++.++ +++..+.+.++++.+ |+.++++++
T Consensus 140 ~~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 140 FANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HHCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hhCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 12355566664 689999999999999 999998875
No 88
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=99.36 E-value=9.4e-13 Score=131.08 Aligned_cols=97 Identities=14% Similarity=0.151 Sum_probs=89.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 178 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 221 (279)
T 3g64_A 178 LLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGP------------------------------------A 221 (279)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.+...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||+++-
T Consensus 222 ~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 274 (279)
T 3g64_A 222 LAHAQTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPKW 274 (279)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCC
Confidence 58889999999998889999999999999999999999999999999987543
No 89
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.36 E-value=1.8e-12 Score=131.50 Aligned_cols=123 Identities=20% Similarity=0.305 Sum_probs=91.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.+.. .....++..++|+++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~------------~~~~~~i~~t~d~~al~ 71 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVM------------AYSNCKVSGSNTYDDLA 71 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHH------------HTCCCCEEEECCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhh------------cCCCcEEEECCCHHHhC
Confidence 4699999999999999999999999 9999999998887544433333221 01123677778899999
Q ss_pred CCCEEEEec--CCCh-----------------HHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhhhcc--CCCceee
Q 008509 226 DVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIG 282 (563)
Q Consensus 226 ~aDlVieav--~e~~-----------------~~k~~v~~~l~~~~~~~~ii--~sntS~l~i~~la~~~~--~~~r~ig 282 (563)
+||+||+++ |++. .+++++++++.+++ |++++ +||++.+. +.++.... .|.|++|
T Consensus 72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~~~~~~~g~~~~rviG 149 (322)
T 1t2d_A 72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQLLHQHSGVPKNKIIG 149 (322)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HHHHHHhcCCChHHEEe
Confidence 999999998 6542 37899999999998 56644 57766543 44443333 5778888
Q ss_pred c
Q 008509 283 A 283 (563)
Q Consensus 283 ~ 283 (563)
+
T Consensus 150 ~ 150 (322)
T 1t2d_A 150 L 150 (322)
T ss_dssp C
T ss_pred c
Confidence 6
No 90
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.35 E-value=9.6e-12 Score=122.77 Aligned_cols=179 Identities=15% Similarity=0.091 Sum_probs=116.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
+||+|||+|.||..||..|+++|++|++||+ +++.++... +.| +. ++. +.+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~-----------~~g-------------~~--~~~~~~~ 54 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-----------TVG-------------VT--ETSEEDV 54 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-----------HHT-------------CE--ECCHHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHH-----------HCC-------------Cc--CCHHHHH
Confidence 3799999999999999999999999999999 666654421 112 12 333 457
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH---HHHhhhccCCCceeecccCCCCC---CCCeEEEE
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSSQDRIIGAHFFSPAH---VMPLLEIV 298 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i---~~la~~~~~~~r~ig~hf~~P~~---~~~lvEiv 298 (563)
.+||+||.|||.+...+. +.++.+.+++ +|++. |+..+ ..+++.+.... +++.+++.++. ...+ .++
T Consensus 55 ~~aDvvi~~v~~~~~~~~--~~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~-~~~ 127 (264)
T 1i36_A 55 YSCPVVISAVTPGVALGA--ARRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIR-IIA 127 (264)
T ss_dssp HTSSEEEECSCGGGHHHH--HHHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCE-EEE
T ss_pred hcCCEEEEECCCHHHHHH--HHHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCe-EEe
Confidence 899999999998765543 3567666766 44443 44443 35677665544 66766665443 2333 444
Q ss_pred eCCCCCHHHHHHHHHHHHHhCCceEEecCcchh-----hhHHHH----HHHHHHHHHHHH-CCCCHHHHHHHHHhcC
Q 008509 299 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVS-LGVDVFRIDSAIRSFG 365 (563)
Q Consensus 299 ~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gf-----i~nRl~----~~~~~Ea~~l~~-~G~~~~~ID~a~~~~G 365 (563)
.++. + +.+.+ ++.+|+.++++++.+|. +.++.+ ...++|++.+.+ .|++++.++.+...+|
T Consensus 128 ~g~~---~--~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~g 198 (264)
T 1i36_A 128 SGRD---A--EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVLEMLEYTEG 198 (264)
T ss_dssp ESTT---H--HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTSC
T ss_pred cCCc---H--HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHhcC
Confidence 5532 2 67777 89999998888754443 344433 345788887765 4897764433324343
No 91
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.35 E-value=1.8e-11 Score=130.99 Aligned_cols=190 Identities=13% Similarity=0.025 Sum_probs=131.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-ccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l~ 225 (563)
.++|+|||+|.||..+|..|+++|++|++||+++++++...+.. . + ..+..+++++ .++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~--------~-~-----------~gi~~~~s~~e~v~ 64 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEH--------Q-D-----------KNLVFTKTLEEFVG 64 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT--------T-T-----------SCEEECSSHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhC--------c-C-----------CCeEEeCCHHHHHh
Confidence 36899999999999999999999999999999999877643210 0 0 1245556664 344
Q ss_pred ---CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhccC-CCceeecccCCCCC---CCCeEE
Q 008509 226 ---DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPAH---VMPLLE 296 (563)
Q Consensus 226 ---~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~~-~~r~ig~hf~~P~~---~~~lvE 296 (563)
++|+||.|||....++ .++.++.+.++++++|++.+++.+. .++.+.+.. ..+++++..+.++. ..+.
T Consensus 65 ~l~~aDvVilavp~~~~v~-~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~~-- 141 (474)
T 2iz1_A 65 SLEKPRRIMLMVQAGAATD-ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGPS-- 141 (474)
T ss_dssp TBCSSCEEEECCCTTHHHH-HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCCC--
T ss_pred hccCCCEEEEEccCchHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCCe--
Confidence 4999999999876554 5668898999999988876666543 456655542 23444432222111 1231
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhCCc--------eEEecC-cch----hhhHHHH---HHHHHHHHHHHHC--CCCHHHHH
Q 008509 297 IVRTERTSAQVILDLMTVGKIIKKV--------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 358 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lGk~--------~v~~~d-~~G----fi~nRl~---~~~~~Ea~~l~~~--G~~~~~ID 358 (563)
++.+ .+++..+.+.++++.+|.. +.++++ ..| ++.|.+. ...+.|++.+... |++++++.
T Consensus 142 i~~g--g~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~ 219 (474)
T 2iz1_A 142 MMPG--GQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQ 219 (474)
T ss_dssp EEEE--ECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred EEec--CCHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 3333 2789999999999999987 355543 333 3455553 3567899988875 89999998
Q ss_pred HHH
Q 008509 359 SAI 361 (563)
Q Consensus 359 ~a~ 361 (563)
.++
T Consensus 220 ~l~ 222 (474)
T 2iz1_A 220 AIF 222 (474)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 92
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=99.35 E-value=7.7e-13 Score=130.63 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=89.2
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhcc-CCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 79 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (563)
|++||++++|+||+++||||+|||++++++.|.++|++++.. +
T Consensus 162 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~------------------------------------ 205 (265)
T 3qxz_A 162 LLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVA------------------------------------ 205 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSC------------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCC------------------------------------
Confidence 578999999999999999999999999999999999999875 4
Q ss_pred ChhHHHHHHHHHHhhccCchhh--HHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 80 MPQHQACLDVIEEGIVHGGYSG--VLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 80 ~~A~~~~~~~i~~~~~~~~~~~--l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
+.+...+|++++.+...+++++ ++.|...|..++.|+|+++++.+|++||++..
T Consensus 206 p~a~~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~f 261 (265)
T 3qxz_A 206 PESAALTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPRW 261 (265)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCCC
Confidence 2588899999999988899999 99999999999999999999999999997644
No 93
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=99.34 E-value=9.4e-13 Score=131.02 Aligned_cols=96 Identities=23% Similarity=0.209 Sum_probs=89.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 179 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 222 (278)
T 4f47_A 179 LLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANG------------------------------------P 222 (278)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 4789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.++..+|++++.+...+++++++.|.+.+..++.|+|+++++.+|++||++.
T Consensus 223 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p~ 274 (278)
T 4f47_A 223 LAVQAILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKPN 274 (278)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCC
Confidence 5888999999999988999999999999999999999999999999998754
No 94
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.34 E-value=9.1e-13 Score=147.60 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=75.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCCC-CCCC
Q 008509 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF-FKPS 536 (563)
Q Consensus 458 ~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~~-~~p~ 536 (563)
++++++||++.+++||++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++ |.|
T Consensus 493 ~~Gfi~Nril~~~~~Ea~~l~~~G-~-~~e~id~~~-~~~g~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~- 565 (725)
T 2wtb_A 493 CTGFAVNRMFFPYTQAAMFLVECG-A-DPYLIDRAI-SKFGMPM---GPFRLCDLVGFGVAIATATQFIENFSERTYKS- 565 (725)
T ss_dssp STTTTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHSGGGCCCC-
T ss_pred CccHHHHHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhchHHHHHHHHHHHHhcCCccCCh-
Confidence 378999999999999999999999 4 799999999 8999999 9999999999999999999999888877 998
Q ss_pred HHHHHHHH-------cCCCccCCC
Q 008509 537 RFLEERAT-------KGIPLSAPV 553 (563)
Q Consensus 537 ~~l~~~~~-------~g~~f~~~~ 553 (563)
+++++|++ +|+|||+|.
T Consensus 566 ~~l~~~v~~g~lG~k~g~GfY~y~ 589 (725)
T 2wtb_A 566 MIIPLMQEDKRAGEATRKGFYLYD 589 (725)
T ss_dssp THHHHHHTTC--------------
T ss_pred HHHHHHHHCCCceecCCceeEeCC
Confidence 89999995 589999995
No 95
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.34 E-value=3.9e-12 Score=130.25 Aligned_cols=182 Identities=16% Similarity=0.096 Sum_probs=122.0
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHH-HHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~-~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
.++|+|||+|.||.++|..|..+|++|+++|++++. .+.+ .+.| +..+ +. +.+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a-----------~~~G-------------~~~~-~~~e~~ 70 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKA-----------EAHG-------------LKVA-DVKTAV 70 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHH-----------HHTT-------------CEEE-CHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHH-----------HHCC-------------CEEc-cHHHHH
Confidence 358999999999999999999999999999998765 2221 1222 2223 44 567
Q ss_pred cCCCEEEEecCCChHHHHHHHH-HHHhhCCCCeEEEecCCCCCHHHHhhhc-cCCCceeecccCCCCCC---------CC
Q 008509 225 KDVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIGAHFFSPAHV---------MP 293 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~-~l~~~~~~~~ii~sntS~l~i~~la~~~-~~~~r~ig~hf~~P~~~---------~~ 293 (563)
++||+||.|+|.+.. ..++. ++.+.++++++|++. +++.+ .+.... ....++++.||+.|.+. ..
T Consensus 71 ~~aDvVilavp~~~~--~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~ 146 (338)
T 1np3_A 71 AAADVVMILTPDEFQ--GRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGI 146 (338)
T ss_dssp HTCSEEEECSCHHHH--HHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCC
T ss_pred hcCCEEEEeCCcHHH--HHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCC
Confidence 899999999997653 68888 888899999998876 44444 333322 12235999999777541 22
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCC-c--eEEec----C-cchhhhHHHH----HHHHHHHH-HHHHCCCCHHHH
Q 008509 294 LLEIVRTERTSAQVILDLMTVGKIIKK-V--PVVVG----N-CTGFAVNRAF----FPYSQSAR-LLVSLGVDVFRI 357 (563)
Q Consensus 294 lvEiv~~~~t~~~~~~~~~~l~~~lGk-~--~v~~~----d-~~Gfi~nRl~----~~~~~Ea~-~l~~~G~~~~~I 357 (563)
.+-++++..++++..+.+..+++.+|. . ++.+. + ...+..+..+ -.++..++ .+++.|+++++.
T Consensus 147 ~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 147 PDLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp CEEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 333566667788889999999999998 4 55552 1 2233323222 22333333 345678877643
No 96
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=99.34 E-value=1.1e-12 Score=130.30 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=89.0
Q ss_pred CccCCC--CCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCC
Q 008509 1 MMLLSK--SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 78 (563)
Q Consensus 1 miltG~--~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (563)
|+|||+ +++|+||+++||||+|||++++++.|.++|++++..+
T Consensus 173 l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~----------------------------------- 217 (274)
T 3tlf_A 173 MALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNA----------------------------------- 217 (274)
T ss_dssp HHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC-----------------------------------
T ss_pred HHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCC-----------------------------------
Confidence 578999 9999999999999999999999999999999998853
Q ss_pred CChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 79 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 79 ~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
+.|+..+|++++.+...+++++++.|...+..++.|+|+++++.+|++||++.
T Consensus 218 -~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 270 (274)
T 3tlf_A 218 -PLAVRGTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQPN 270 (274)
T ss_dssp -HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCC
T ss_pred -HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCC
Confidence 35889999999999988999999999999999999999999999999998754
No 97
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=99.33 E-value=5.1e-13 Score=132.00 Aligned_cols=96 Identities=19% Similarity=0.311 Sum_probs=88.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 165 l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 208 (267)
T 3r9t_A 165 LLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNA------------------------------------P 208 (267)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCC------------------------------------h
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHH---HHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDV---IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~---i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|+..+|++ ++.+...+++++++.|...+..++.|+|+++++.+|++||++.
T Consensus 209 ~a~~~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~ 263 (267)
T 3r9t_A 209 LSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREPV 263 (267)
T ss_dssp HHHHHHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 588899999 8888888999999999999999999999999999999998754
No 98
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=99.33 E-value=1.7e-12 Score=127.77 Aligned_cols=96 Identities=18% Similarity=0.236 Sum_probs=88.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 159 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 202 (258)
T 2pbp_A 159 WLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQP------------------------------------P 202 (258)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.++..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||++.
T Consensus 203 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 254 (258)
T 2pbp_A 203 LALRLIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPR 254 (258)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCC
Confidence 5888999999998888999999999999999999999999999999988653
No 99
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=99.33 E-value=1.9e-12 Score=127.83 Aligned_cols=96 Identities=18% Similarity=0.200 Sum_probs=88.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 166 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 209 (265)
T 2ppy_A 166 MNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSA------------------------------------T 209 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999988743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.++..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||++.
T Consensus 210 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~ 261 (265)
T 2ppy_A 210 YAVSNIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQPN 261 (265)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 5888999999998888999999999999999999999999999999987653
No 100
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=99.32 E-value=1.3e-12 Score=130.62 Aligned_cols=97 Identities=20% Similarity=0.147 Sum_probs=89.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 188 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 231 (290)
T 3sll_A 188 IMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFS------------------------------------R 231 (290)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhc-cCchhhHHHHHHHHHHHh-cCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIV-HGGYSGVLKEAKVFKELV-MLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~-~~~~~~l~~E~~~f~~l~-~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.+.. .+++++++.|...+..++ .|+|+++++.+|++||++..
T Consensus 232 ~a~~~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~f 286 (290)
T 3sll_A 232 PGIELTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAEF 286 (290)
T ss_dssp HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 588899999999988 899999999999999999 99999999999999987543
No 101
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=99.32 E-value=8.7e-13 Score=129.93 Aligned_cols=97 Identities=12% Similarity=0.143 Sum_probs=80.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 163 llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 206 (260)
T 1sg4_A 163 ALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIP------------------------------------D 206 (260)
T ss_dssp HHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.+...+|++++.....+++++++.|.+.|..++.|+++++++.+|++||+++|
T Consensus 207 ~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~~~~ 259 (260)
T 1sg4_A 207 HARQLTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEEK 259 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC---------
T ss_pred HHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 47788999999888778899999999999999999999999999999998765
No 102
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.32 E-value=5e-12 Score=140.94 Aligned_cols=120 Identities=14% Similarity=0.152 Sum_probs=99.0
Q ss_pred CHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCC--CHHHHHHHH-HhcCCCc---cHHHHhhhh
Q 008509 304 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLA 377 (563)
Q Consensus 304 ~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~--~~~~ID~a~-~~~G~p~---GPf~~~D~~ 377 (563)
++++.+.+..+....+...... ....+..|++.+++||+++++++|+ ++.|||.+| .|+|||. |||+++|.+
T Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~--~~~ei~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~ 689 (742)
T 3zwc_A 612 DPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASV 689 (742)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHH
T ss_pred ChHHHHHHHHHhhhcCCCcCCC--CHHHHHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHH
Confidence 5666555555554444332222 2356899999999999999999997 899999999 9999998 999999999
Q ss_pred chHHHHHHHHHHHHhCCC--CCCchHHHHHHHHcCCCCcccCccccccCC
Q 008509 378 GYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGRNGKANGKGLYTYEK 425 (563)
Q Consensus 378 Gld~~~~~~~~l~~~~~~--~~~~~~~l~~l~~~g~~G~k~g~GFY~y~~ 425 (563)
|++.+.+.++.+.+.+|+ ++.|+++|++|+++|....+.+++||.|..
T Consensus 690 G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~ma~~G~~~f~~~~~~~~~~~ 739 (742)
T 3zwc_A 690 GLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPLKEWQSLAGPHG 739 (742)
T ss_dssp CHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCCGGGHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHcCCCcccccccccCCCC
Confidence 999999999999999997 344999999999999988888888887653
No 103
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.32 E-value=1.2e-12 Score=137.96 Aligned_cols=117 Identities=16% Similarity=0.135 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCC--CHHHHHHHH-HhcCCCc---cHHHHhhh
Q 008509 303 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDL 376 (563)
Q Consensus 303 t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~--~~~~ID~a~-~~~G~p~---GPf~~~D~ 376 (563)
.++++.+.+..+....+..+. ......+.+|++.+++||+++++++|+ ++.|||.+| .|+|||. |||+++|.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~ 408 (460)
T 3k6j_A 331 NDTEMEQIIRRVSQNAKSNIQ--IINDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKT 408 (460)
T ss_dssp CCHHHHHHHHHC---CCCSSC--CCSHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSC
T ss_pred CCHHHHHHHHHHHHhcCCCcc--cCChHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHH
Confidence 355554444333222232221 224578999999999999999999997 699999999 9999998 99999999
Q ss_pred hchHHHHHHHHHHHHhCCCC--CCchHHHHHHHHcCCCCcccCcccc
Q 008509 377 AGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANGKGLY 421 (563)
Q Consensus 377 ~Gld~~~~~~~~l~~~~~~~--~~~~~~l~~l~~~g~~G~k~g~GFY 421 (563)
+|++.+.+.++.|.+.+|++ +.|+++|.+|+++|++|.|+|.+..
T Consensus 409 ~G~~~~~~~l~~l~~~~g~~~~~~p~~~L~~~a~~g~~~~~~~~~~~ 455 (460)
T 3k6j_A 409 EGLDKIANMLVHWSSLEPKESAYIVADALKTANVSTGSSGSSGGHHH 455 (460)
T ss_dssp BSSHHHHHHHHHHHHHCTTCGGGSCCHHHHHHC--------------
T ss_pred hCHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHcCCCccccCCCcc
Confidence 99999999999999999998 4599999999999999999998643
No 104
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=99.31 E-value=2.2e-12 Score=127.10 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=88.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.+.+++++++..+ +
T Consensus 161 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 204 (260)
T 1mj3_A 161 MVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNS------------------------------------K 204 (260)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.++..+|++++.+...+++++++.|...|..++.|+++++++++|++||++.
T Consensus 205 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~p~ 256 (260)
T 1mj3_A 205 IIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKAN 256 (260)
T ss_dssp HHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCC
Confidence 5888999999998888999999999999999999999999999999987653
No 105
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.31 E-value=2.1e-11 Score=130.77 Aligned_cols=191 Identities=14% Similarity=0.075 Sum_probs=129.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc-c--
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F-- 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-l-- 224 (563)
++|+|||+|.||..+|..|+++|++|++||+++++++...+. ...| ..+..++++++ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~--------~~~g-----------~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN--------EAKG-----------TKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT--------TTTT-----------SSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc--------cccC-----------CCeEEeCCHHHHHhh
Confidence 479999999999999999999999999999999987764320 0001 12455666643 3
Q ss_pred -cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhcc-CCCceeecccCCCCC---CCCeEEE
Q 008509 225 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 297 (563)
Q Consensus 225 -~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~-~~~r~ig~hf~~P~~---~~~lvEi 297 (563)
+++|+||.|||....++ .++.++.+.++++++|++.+++.+. ..+.+.+. ....++++..+.++. ..+.+ +
T Consensus 64 l~~aDvVilaVp~~~~v~-~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~~i-~ 141 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQAVD-NFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGPSL-M 141 (482)
T ss_dssp BCSSCEEEECSCTTHHHH-HHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCCEE-E
T ss_pred ccCCCEEEEeCCChHHHH-HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCCeE-E
Confidence 58999999999875554 5668898999999988876666553 24555443 233455543322221 12222 3
Q ss_pred EeCCCCCHHHHHHHHHHHHHhCCce-------EEec-Ccch----hhhHHHH---HHHHHHHHHHHH-C-CCCHHHHHHH
Q 008509 298 VRTERTSAQVILDLMTVGKIIKKVP-------VVVG-NCTG----FAVNRAF---FPYSQSARLLVS-L-GVDVFRIDSA 360 (563)
Q Consensus 298 v~~~~t~~~~~~~~~~l~~~lGk~~-------v~~~-d~~G----fi~nRl~---~~~~~Ea~~l~~-~-G~~~~~ID~a 360 (563)
+.+ +++..+.+.++++.+|..+ .+++ ...| ++.|.+. ...++|+..+.. . |++++++..+
T Consensus 142 ~gg---~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~ 218 (482)
T 2pgd_A 142 PGG---NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKA 218 (482)
T ss_dssp EEE---CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred eCC---CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 333 4678889999999999876 4443 2333 3445553 356889988886 4 8899999888
Q ss_pred HH
Q 008509 361 IR 362 (563)
Q Consensus 361 ~~ 362 (563)
+.
T Consensus 219 ~~ 220 (482)
T 2pgd_A 219 FE 220 (482)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 106
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.31 E-value=2.9e-11 Score=129.34 Aligned_cols=193 Identities=12% Similarity=0.057 Sum_probs=130.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-ccc-
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFK- 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l~- 225 (563)
++|+|||+|.||..+|..|+++|++|++||+++++++...+. .|.... ...+..+++++ .++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~----------~g~~~~------~~~i~~~~~~~e~v~~ 65 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA----------NASAPF------AGNLKAFETMEAFAAS 65 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH----------TTTSTT------GGGEEECSCHHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----------cCCCCC------CCCeEEECCHHHHHhc
Confidence 479999999999999999999999999999999987764321 121100 01355566664 333
Q ss_pred --CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhccC-CCceeecccCCCCC---CCCeEEE
Q 008509 226 --DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPAH---VMPLLEI 297 (563)
Q Consensus 226 --~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~~-~~r~ig~hf~~P~~---~~~lvEi 297 (563)
++|+||.|||....++ .++.++.+.++++++|++.+++.+. ..+.+.+.. ...++++....++. ..+ .+
T Consensus 66 l~~aDvVilaVp~~~~v~-~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~i 142 (478)
T 1pgj_A 66 LKKPRKALILVQAGAATD-STIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP--AF 142 (478)
T ss_dssp BCSSCEEEECCCCSHHHH-HHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEecCChHHHH-HHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC--eE
Confidence 5999999999875554 5668888899999988876655543 355555532 33444443222221 223 23
Q ss_pred EeCCCCCHHHHHHHHHHHHHhCCc-------eEEecC-cchh----hhHHHH---HHHHHHHHHHHHC-CCCHHHHHHHH
Q 008509 298 VRTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTGF----AVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 361 (563)
Q Consensus 298 v~~~~t~~~~~~~~~~l~~~lGk~-------~v~~~d-~~Gf----i~nRl~---~~~~~Ea~~l~~~-G~~~~~ID~a~ 361 (563)
+.+ .+++..+.+.++++.+|.. +.++++ ..|. +.|.+. ..+++|++.+... |++++++..++
T Consensus 143 ~~g--g~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~ 220 (478)
T 1pgj_A 143 FPG--GTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVL 220 (478)
T ss_dssp EEE--ECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ecc--CCHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 333 2688999999999999987 455543 3332 345443 3568899887754 88999998887
No 107
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.30 E-value=4.2e-12 Score=129.44 Aligned_cols=123 Identities=21% Similarity=0.263 Sum_probs=91.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 224 (563)
.+||+|||+|.||.++|..|+..|+ +|++||++++.++.....+.+....+ + ...++..++|++ ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~---------~~~~i~~t~d~~ea~ 76 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D---------TNVSVRAEYSYEAAL 76 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T---------CCCCEEEECSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C---------CCCEEEEeCCHHHHh
Confidence 3589999999999999999999998 99999999988877444343333211 1 123678888996 89
Q ss_pred cCCCEEEEec--CCCh-----------------HHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhhhcc--CCCcee
Q 008509 225 KDVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRII 281 (563)
Q Consensus 225 ~~aDlVieav--~e~~-----------------~~k~~v~~~l~~~~~~~~ii--~sntS~l~i~~la~~~~--~~~r~i 281 (563)
++||+||+++ |++. .+++++++++.+++ |++++ +||++++. +.++.... .|.|++
T Consensus 77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~~~~~~~~~~~rvi 154 (331)
T 1pzg_A 77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKVMCEASGVPTNMIC 154 (331)
T ss_dssp TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHHHHHhcCCChhcEE
Confidence 9999999998 7654 34889999999998 56655 56766553 44443333 567888
Q ss_pred ec
Q 008509 282 GA 283 (563)
Q Consensus 282 g~ 283 (563)
|+
T Consensus 155 G~ 156 (331)
T 1pzg_A 155 GM 156 (331)
T ss_dssp EC
T ss_pred ec
Confidence 86
No 108
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=99.30 E-value=2.4e-12 Score=127.46 Aligned_cols=97 Identities=16% Similarity=0.141 Sum_probs=88.5
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.+++++++..+ +
T Consensus 164 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 207 (269)
T 1nzy_A 164 LMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAP------------------------------------T 207 (269)
T ss_dssp HHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.+...+|++++.+...+++++++.|...|..++.|+++++++.+|++||++.-
T Consensus 208 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f 260 (269)
T 1nzy_A 208 HLQVMAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADR 260 (269)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCC
Confidence 57888999999988889999999999999999999999999999999987644
No 109
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=99.30 E-value=2.3e-12 Score=126.46 Aligned_cols=95 Identities=15% Similarity=0.154 Sum_probs=87.5
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.+.+++++++..+ +
T Consensus 157 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 200 (253)
T 1uiy_A 157 LLLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNA------------------------------------P 200 (253)
T ss_dssp HHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~ 131 (563)
.+...+|++++.+...+++++++.|.+.|..++.|+++++++++|++||++
T Consensus 201 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~p 251 (253)
T 1uiy_A 201 TSLRLTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRPP 251 (253)
T ss_dssp HHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCCC
Confidence 578889999999988899999999999999999999999999999998764
No 110
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.30 E-value=2.2e-11 Score=115.95 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=101.0
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
..++|+|||+|.||+++|..|+++|++|++||++++ .++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~ 56 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATT 56 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhc
Confidence 357899999999999999999999999999998754 357
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC---------------HHHHhhhccCCCceee-cccCCCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID---------------LNIVGEKTSSQDRIIG-AHFFSPA 289 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~---------------i~~la~~~~~~~r~ig-~hf~~P~ 289 (563)
+||+||.|+| ....++++.++.+.++ ++++++.+++++ ...+++.++ ..++++ .|++..|
T Consensus 57 ~aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p 132 (209)
T 2raf_A 57 LGEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAA 132 (209)
T ss_dssp CCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHH
T ss_pred cCCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHh
Confidence 8999999999 3345688888888888 888888777665 345555554 357777 6765422
Q ss_pred C------C--CCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecC
Q 008509 290 H------V--MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 327 (563)
Q Consensus 290 ~------~--~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d 327 (563)
. . .+...++.+ .+++..+.+.++++.+|..++.+++
T Consensus 133 ~~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 133 TLQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp HHHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred hccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 1 1 122323333 4678999999999999998888876
No 111
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.30 E-value=1.3e-12 Score=146.11 Aligned_cols=90 Identities=16% Similarity=0.231 Sum_probs=83.9
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHHHHHHHHHHHhCCCCCCC-
Q 008509 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS- 536 (563)
Q Consensus 458 ~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~- 536 (563)
++++++||++.+++||++.++++|+ ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++|.|+
T Consensus 495 ~~Gfi~Nril~~~~~Ea~~l~~~G~--~~~~id~~~-~~~G~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~~ 568 (715)
T 1wdk_A 495 CPGFLVNRVLFPYFGGFAKLVSAGV--DFVRIDKVM-EKFGWPM---GPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDR 568 (715)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTC--CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHCHHHHCCSS
T ss_pred CCChhhhHHHHHHHHHHHHHHHCCC--CHHHHHHHH-HHcCCCC---CHHHHHHHhhHHHHHHHHHHHHHhcCCccCCCh
Confidence 4789999999999999999999994 799999999 8999999 99999999999999999999988887789998
Q ss_pred -HHHHHHHH-------cCCCccCCC
Q 008509 537 -RFLEERAT-------KGIPLSAPV 553 (563)
Q Consensus 537 -~~l~~~~~-------~g~~f~~~~ 553 (563)
++|++|++ +|+|||+|.
T Consensus 569 ~~~l~~~v~~g~lG~k~g~GfY~y~ 593 (715)
T 1wdk_A 569 RSAIDALYEAKRLGQKNGKGFYAYE 593 (715)
T ss_dssp CCHHHHHHHTTCCBTTTTBSSSEEC
T ss_pred HHHHHHHHhCchhhhcCCcEEEecc
Confidence 99999996 589999996
No 112
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=99.30 E-value=2.3e-12 Score=126.67 Aligned_cols=96 Identities=19% Similarity=0.175 Sum_probs=87.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.+.+++++++..+ +
T Consensus 158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 201 (257)
T 2ej5_A 158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMP------------------------------------T 201 (257)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.+...+|++++.+...+++++++.|.+.|..++.|+++++++++|++||++.
T Consensus 202 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 253 (257)
T 2ej5_A 202 KAIGLIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPL 253 (257)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCCCC
Confidence 5788899999998888999999999999999999999999999999987653
No 113
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.30 E-value=3.9e-11 Score=117.18 Aligned_cols=165 Identities=13% Similarity=0.106 Sum_probs=103.4
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHH-HHHHH-HHHHHH-HHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGI-KTIEAN-VRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~-~~~~~-~~i~~~-~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
..++|+|||+|.||.+||..|+++|++|++||++++. +.+.. ...... +..+.+. ...+...+..+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~e 86 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPE-----------HPHVHLAAFAD 86 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGG-----------STTCEEEEHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhh-----------cCceeccCHHH
Confidence 3578999999999999999999999999999999886 11100 000000 0011111 11233333346
Q ss_pred cccCCCEEEEecCCChHHHHHHHHHH-HhhCCCCeEEEecCCCC----------------CH-HHHhhhccCCCcee-ec
Q 008509 223 EFKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTSTI----------------DL-NIVGEKTSSQDRII-GA 283 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~~k~~v~~~l-~~~~~~~~ii~sntS~l----------------~i-~~la~~~~~~~r~i-g~ 283 (563)
.+++||+||.|||.+... +++.++ .+.+ ++++|++.+.++ .+ ..+++.++. .+++ |+
T Consensus 87 ~~~~aDvVilavp~~~~~--~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~-~~vv~~~ 162 (245)
T 3dtt_A 87 VAAGAELVVNATEGASSI--AALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE-AKVVKTL 162 (245)
T ss_dssp HHHHCSEEEECSCGGGHH--HHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT-SEEEECS
T ss_pred HHhcCCEEEEccCcHHHH--HHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC-CeEEEee
Confidence 788999999999977533 566677 6666 778777665321 23 345555542 4554 56
Q ss_pred ccCC-CC-------CCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCce-EEecC
Q 008509 284 HFFS-PA-------HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP-VVVGN 327 (563)
Q Consensus 284 hf~~-P~-------~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~-v~~~d 327 (563)
++.. |+ ...++..++.+ .+++..+.++++++.+|+.+ +++++
T Consensus 163 ~~~~a~v~~~~~~a~~g~~~~~v~g--~d~~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 163 NTMNASLMVDPGRAAGGDHSVFVSG--NDAAAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp TTSCHHHHHCGGGTGGGCCCEEEEC--SCHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred cccCHHHhcCccccCCCCeeEEEEC--CCHHHHHHHHHHHHHcCCCceeccCc
Confidence 6543 11 12344445555 37899999999999999764 67764
No 114
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=99.29 E-value=1.4e-12 Score=128.52 Aligned_cols=93 Identities=18% Similarity=0.112 Sum_probs=72.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 165 l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 208 (262)
T 3r9q_A 165 LILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFP------------------------------------Q 208 (262)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~ 131 (563)
.|...+|++++.+...+++++++.|.. +..++.| |+++++.+|++||++
T Consensus 209 ~a~~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p 257 (262)
T 3r9q_A 209 QCVRADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGR 257 (262)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC----------------
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCC
Confidence 588899999999999999999999999 9999999 999999999999865
No 115
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=99.29 E-value=7.5e-13 Score=130.13 Aligned_cols=94 Identities=23% Similarity=0.254 Sum_probs=52.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.++|++++..+ +
T Consensus 163 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 206 (256)
T 3qmj_A 163 LLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKP------------------------------------I 206 (256)
T ss_dssp HHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 130 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~ 130 (563)
.|...+|++++.+...+++++++.|...|..++.|+|+++++.+|++||+
T Consensus 207 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 207 SSLMAVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp HHHHHHHHHHHCC-------------------------------------
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 58889999999988889999999999999999999999999999999884
No 116
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=99.29 E-value=3.7e-12 Score=127.03 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=87.7
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 189 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 232 (287)
T 2vx2_A 189 MLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLS------------------------------------R 232 (287)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.+...+|++++.+...+++++++.|.+.|..++.|+++++++++|++||++.
T Consensus 233 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~ 284 (287)
T 2vx2_A 233 PVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPV 284 (287)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCC
Confidence 5788899999998888999999999999999999999999999999987653
No 117
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=99.28 E-value=9.1e-13 Score=132.12 Aligned_cols=98 Identities=18% Similarity=0.193 Sum_probs=55.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhcc-CCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 79 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++.. +
T Consensus 194 llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~------------------------------------ 237 (298)
T 3qre_A 194 LLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCS------------------------------------ 237 (298)
T ss_dssp HHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSC------------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCC------------------------------------
Confidence 578999999999999999999999999999999999999885 3
Q ss_pred ChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 80 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 80 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
+.|...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||++...
T Consensus 238 p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~ 292 (298)
T 3qre_A 238 PSSMAVIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFP 292 (298)
T ss_dssp HHHHHHHHHHHHGGGGC--------------------------------------
T ss_pred HHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 2588899999999998899999999999999999999999999999999987543
No 118
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=99.28 E-value=3.3e-12 Score=125.88 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=87.6
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 160 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 203 (261)
T 1ef8_A 160 LIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKA------------------------------------P 203 (261)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999988743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHH--HHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFK--ELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~--~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.+...+|++++.+...+++++++.|.+.|. .++.|+++++++++|++||++.
T Consensus 204 ~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~p~ 257 (261)
T 1ef8_A 204 LAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPN 257 (261)
T ss_dssp HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCCCC
Confidence 578889999999888899999999999999 9999999999999999987653
No 119
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=99.28 E-value=3.9e-12 Score=125.59 Aligned_cols=94 Identities=14% Similarity=0.031 Sum_probs=86.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.+++++++..+ +
T Consensus 168 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 211 (264)
T 1wz8_A 168 HLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGP------------------------------------K 211 (264)
T ss_dssp HHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~ 131 (563)
.+...+|++++.+... ++++++.|.+.|..++.|+++++++++|++||++
T Consensus 212 ~a~~~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p 261 (264)
T 1wz8_A 212 EALHHTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRPP 261 (264)
T ss_dssp HHHHHHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCCC
Confidence 5788899999988877 9999999999999999999999999999998865
No 120
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=99.27 E-value=2.1e-12 Score=127.31 Aligned_cols=95 Identities=12% Similarity=0.124 Sum_probs=87.2
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++.+.+.+++++++..+ +
T Consensus 165 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 208 (261)
T 2gtr_A 165 MLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCN------------------------------------P 208 (261)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~ 131 (563)
.+...+|++++.....+++++++.|...|..++.|+|+++++.+|++||++
T Consensus 209 ~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~P 259 (261)
T 2gtr_A 209 VVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKID 259 (261)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 578889999998877788999999999999999999999999999999876
No 121
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=99.27 E-value=2.8e-12 Score=127.55 Aligned_cols=95 Identities=17% Similarity=0.162 Sum_probs=76.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.+++++++..+ +
T Consensus 185 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 228 (280)
T 2f6q_A 185 MLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLP------------------------------------P 228 (280)
T ss_dssp HHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999988743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~ 131 (563)
.+...+|++++.+...+++++++.|.+.|..++.|+|+++++.+|++||++
T Consensus 229 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR~p 279 (280)
T 2f6q_A 229 NALRISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSK 279 (280)
T ss_dssp HHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC-----------
T ss_pred HHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 478889999998877788999999999999999999999999999999864
No 122
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=99.26 E-value=7.8e-12 Score=125.54 Aligned_cols=117 Identities=23% Similarity=0.265 Sum_probs=84.1
Q ss_pred CccceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 144 PRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 144 ~~~~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
.++++||+|||+|.||.++|..++..|+ +|+++|++++....+.+.. + . ...++..++|+
T Consensus 11 ~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~----~--~------------~~~~i~~t~d~ 72 (303)
T 2i6t_A 11 NKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE----I--F------------NLPNVEISKDL 72 (303)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH----H--H------------TCTTEEEESCG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh----h--h------------cCCCeEEeCCH
Confidence 4456899999999999999999999999 9999999986322222111 0 0 01257777899
Q ss_pred ccccCCCEEEEec-------------CCChHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhhhcc----C-CCcee
Q 008509 222 SEFKDVDMVIEAV-------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS----S-QDRII 281 (563)
Q Consensus 222 ~~l~~aDlVieav-------------~e~~~~k~~v~~~l~~~~~~~~ii--~sntS~l~i~~la~~~~----~-~~r~i 281 (563)
+++++||+||+++ .++..+++++++++.+++ |++++ +|| |++.++..+. . |.|++
T Consensus 73 ~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sN----P~~~~t~~~~~~~~~p~~rvi 147 (303)
T 2i6t_A 73 SASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQ----PVEIMTYVTWKLSTFPANRVI 147 (303)
T ss_dssp GGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSS----SHHHHHHHHHHHHCCCGGGEE
T ss_pred HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCC----hHHHHHHHHHHhcCCCHHHee
Confidence 9999999999997 899999999999999998 56654 566 4444443332 2 66888
Q ss_pred ec
Q 008509 282 GA 283 (563)
Q Consensus 282 g~ 283 (563)
|+
T Consensus 148 G~ 149 (303)
T 2i6t_A 148 GI 149 (303)
T ss_dssp EC
T ss_pred CC
Confidence 86
No 123
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=99.26 E-value=2.6e-12 Score=128.33 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=82.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.+.++|++++..+ +
T Consensus 183 l~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 226 (291)
T 2fbm_A 183 MLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYN------------------------------------P 226 (291)
T ss_dssp HHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5799999999999999999999999999999999999998753 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHH-hhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF-FAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF-~~kr~~~k 133 (563)
.+...+|++++.+...+++++++.|.+.|..++.|+|+++++.+| ++||++.-
T Consensus 227 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR~P~f 280 (291)
T 2fbm_A 227 IVLEECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGYKAAF 280 (291)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC---------
T ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCC
Confidence 578889999998877788999999999999999999999999999 99987643
No 124
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=99.24 E-value=7.3e-12 Score=124.41 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=87.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCC-chHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 79 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~-~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (563)
|++||++++|+||+++||||+|||+ +++++.|.++|++++..+
T Consensus 172 l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~------------------------------------ 215 (275)
T 1dci_A 172 LTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKS------------------------------------ 215 (275)
T ss_dssp HHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSC------------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCC------------------------------------
Confidence 5789999999999999999999999 999999999999998853
Q ss_pred ChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhh---hhh
Q 008509 80 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RAT 131 (563)
Q Consensus 80 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~k---r~~ 131 (563)
+.+...+|++++.+...+++++++.|...+..++.|+|+++++++|++| |++
T Consensus 216 p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek~~~r~p 270 (275)
T 1dci_A 216 PVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSKSI 270 (275)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCC
Confidence 3588899999999888899999999999999999999999999999998 654
No 125
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=99.23 E-value=1.3e-11 Score=126.53 Aligned_cols=134 Identities=10% Similarity=0.017 Sum_probs=89.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccC-------Cccchhc------cccCCCCChHHHHHHH-
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR-------KPWIRSL------HRTDKLGSLSEAREVL- 66 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~-------~p~~~~~------~~~~~~~~~~~~~~~~- 66 (563)
|+|||++++|+||+++||||+|||+++|.+.+.+++.+..... .|..... ...-...+.......+
T Consensus 168 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~~L~ 247 (353)
T 4hdt_A 168 AALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIAALR 247 (353)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHHHHH
T ss_pred HHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 5789999999999999999999999999999999987643211 0000000 0000000000000000
Q ss_pred ----HHHHHHHH-hhCCCChhHHHHHHHHHHhhcc-CchhhHHHHHHHHHHHhcCHHHHHHHHHHh--hhhhhccC
Q 008509 67 ----KLARLQAK-KTAPNMPQHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFF--AQRATSKV 134 (563)
Q Consensus 67 ----~~~~~~~~-~~~~~~~A~~~~~~~i~~~~~~-~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~--~kr~~~k~ 134 (563)
..+....+ -..+.+.++..+|++++.+... +++++|+.|.+++..++.|+|++||++||+ +||+++-+
T Consensus 248 ~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~ 323 (353)
T 4hdt_A 248 AHDAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWR 323 (353)
T ss_dssp HHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCS
T ss_pred hcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCC
Confidence 01111222 3455678999999999998876 799999999999999999999999999998 88876443
No 126
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=99.23 E-value=5.6e-12 Score=124.45 Aligned_cols=95 Identities=15% Similarity=0.239 Sum_probs=79.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+||| ++++.|.++|++++..+ +
T Consensus 163 l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~------------------------------------~ 204 (266)
T 3fdu_A 163 LLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALP------------------------------------L 204 (266)
T ss_dssp HHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCC------------------------------------H
Confidence 578999999999999999999998 89999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
.|...+|++++.+. .+++++++.|...+..++.|+|+++++.+|++||++...
T Consensus 205 ~a~~~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p~~~ 257 (266)
T 3fdu_A 205 ASLKQTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQPDFS 257 (266)
T ss_dssp HHHHHHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 58888999998865 578999999999999999999999999999999987554
No 127
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=99.22 E-value=1e-11 Score=122.82 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=85.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+| ++++++.|.+++++++..+ +
T Consensus 171 l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~------------------------------------~ 212 (267)
T 3oc7_A 171 YYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGS------------------------------------P 212 (267)
T ss_dssp HHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999 7889999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.+...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||++.
T Consensus 213 ~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~ 264 (267)
T 3oc7_A 213 QGLAASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSPN 264 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCC
Confidence 5888999999998888899999999999999999999999999999998653
No 128
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=99.22 E-value=1.2e-11 Score=122.63 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=82.5
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 173 llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 216 (275)
T 4eml_A 173 IWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKS------------------------------------P 216 (275)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.+... .....+.|.+.+..++.|+|+++++.+|++||++..
T Consensus 217 ~a~~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p~f 268 (275)
T 4eml_A 217 LAIRCLKAAFNADCDG-QAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDF 268 (275)
T ss_dssp HHHHHHHHHHHHTTSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHhhhcc-chhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 5888899999886532 334456788889999999999999999999997644
No 129
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.22 E-value=1.9e-11 Score=116.90 Aligned_cols=150 Identities=13% Similarity=0.113 Sum_probs=102.0
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
..++|+|||+|.||..++..|++.|++|+++|++++.++... +.| +..+ ++ +.+
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g-------------~~~~-~~~~~~ 81 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF-----------PSA-------------AQVT-FQEEAV 81 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS-----------BTT-------------SEEE-EHHHHT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcC-------------Ccee-cHHHHH
Confidence 456899999999999999999999999999999988765421 111 2223 33 567
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHh----------hhccCCCceeec-ccCC-----C
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----------EKTSSQDRIIGA-HFFS-----P 288 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la----------~~~~~~~r~ig~-hf~~-----P 288 (563)
+++|+||.|+|.+. ...++. +...+ ++++|++.+++++++.+. +.+. ..++++. ++.. +
T Consensus 82 ~~~DvVi~av~~~~--~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~~n~~~~~~~~~ 156 (215)
T 2vns_A 82 SSPEVIFVAVFREH--YSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKAFNVISAWTLQA 156 (215)
T ss_dssp TSCSEEEECSCGGG--SGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEECTTBCHHHHHT
T ss_pred hCCCEEEECCChHH--HHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEeccccccHhHhcc
Confidence 89999999999642 344554 55555 788999999888876543 3332 2344432 2211 1
Q ss_pred -CCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecC
Q 008509 289 -AHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 327 (563)
Q Consensus 289 -~~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d 327 (563)
+...+...++.+ .+++..+.+.++++.+|+.++++++
T Consensus 157 ~~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 157 GPRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp CSCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred cccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 111122223333 3789999999999999999999975
No 130
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=99.21 E-value=3.2e-12 Score=125.20 Aligned_cols=94 Identities=14% Similarity=0.110 Sum_probs=67.2
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.+.+++++++..+ +
T Consensus 157 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 200 (250)
T 2a7k_A 157 IIYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYP------------------------------------A 200 (250)
T ss_dssp HHHHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 130 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~ 130 (563)
.+...+|++++.+...+++++++.|.+.|..++.|+|+++++++|++||+
T Consensus 201 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 250 (250)
T 2a7k_A 201 SAFINTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKKY 250 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 57888999999888778899999999999999999999999999999874
No 131
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=99.21 E-value=5.7e-12 Score=124.24 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=83.2
Q ss_pred CccCCCCCCHHHHHhCCCcceecC-CchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 79 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~-~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (563)
|++||++++|+||+++||||+||| ++++.+.|.++|++++..+
T Consensus 165 l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~------------------------------------ 208 (263)
T 3lke_A 165 LLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGY------------------------------------ 208 (263)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSC------------------------------------
T ss_pred HHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCC------------------------------------
Confidence 578999999999999999999999 9999999999999998853
Q ss_pred ChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 80 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 80 ~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
+.|...+|++++.+...+++++++.|...+..++.|+|+++++.+|.+++++.
T Consensus 209 ~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~~~~ 261 (263)
T 3lke_A 209 VPAIAATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGHHHH 261 (263)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccCCCC
Confidence 35888999999998888899999999999999999999999999999988653
No 132
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=99.20 E-value=1.4e-11 Score=122.19 Aligned_cols=95 Identities=16% Similarity=0.226 Sum_probs=83.7
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.++|++++..+ +
T Consensus 171 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 214 (273)
T 2uzf_A 171 IWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHS------------------------------------P 214 (273)
T ss_dssp HHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999988743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHH-HHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEA-KVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~-~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.+...+|++++ ...+++++++.|. +.|..++.|+|+++++.+|++||++.-
T Consensus 215 ~a~~~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p~f 266 (273)
T 2uzf_A 215 TALRFLKAAMN--ADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDF 266 (273)
T ss_dssp HHHHHHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCCCC
Confidence 47788888888 3457889999999 999999999999999999999887543
No 133
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.19 E-value=4.3e-10 Score=117.73 Aligned_cols=200 Identities=19% Similarity=0.210 Sum_probs=121.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHhh----hcCeeeecCc-
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNA----LKMLKGVLDY- 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~~~----~~~i~~~~~~- 221 (563)
+||+|||+|.||..+|..|++ |++|++||+++++++...+ .+. +.....+.. ..++..++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~-----------~~~~i~e~~l~~~~~~~~~~l~~t~~~~ 68 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINN-----------GLSPIQDEYIEYYLKSKQLSIKATLDSK 68 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHT-----------TCCSSCCHHHHHHHHHSCCCEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHc-----------CCCCcCCCCHHHHHHhccCcEEEeCCHH
Confidence 379999999999999999999 9999999999998776431 111 111111111 1246677776
Q ss_pred ccccCCCEEEEecCCChH---------HHHHHHHHHHhhCCCCeEEEe-cCCCCC-HHHHhhhccCCCceee-cccCCCC
Q 008509 222 SEFKDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILAT-NTSTID-LNIVGEKTSSQDRIIG-AHFFSPA 289 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~---------~k~~v~~~l~~~~~~~~ii~s-ntS~l~-i~~la~~~~~~~r~ig-~hf~~P~ 289 (563)
+.+++||+||.|||...+ ...++++.+.+ ++++++|+. +|.... ...+++.+... .++. -.+..|.
T Consensus 69 ~~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~v~~~Pe~~~~G 146 (402)
T 1dlj_A 69 AAYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD-RIIFSPEFLRES 146 (402)
T ss_dssp HHHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS-CEEECCCCCCTT
T ss_pred HHhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC-eEEECCccccCc
Confidence 578899999999998741 45677788888 888888775 343332 33555554322 2221 1112222
Q ss_pred CCC-----CeEEEEeCCCC----CHHHHHHHHHHHHHhC-C-c-eEEecCcc-----hhhhHHHH---HHHHHHHHHHHH
Q 008509 290 HVM-----PLLEIVRTERT----SAQVILDLMTVGKIIK-K-V-PVVVGNCT-----GFAVNRAF---FPYSQSARLLVS 349 (563)
Q Consensus 290 ~~~-----~lvEiv~~~~t----~~~~~~~~~~l~~~lG-k-~-~v~~~d~~-----Gfi~nRl~---~~~~~Ea~~l~~ 349 (563)
... +---++.+... ..+..+.+.+++...+ + . ++++.+.. ..+.|-++ .+++||+..+.+
T Consensus 147 ~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~ 226 (402)
T 1dlj_A 147 KALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAE 226 (402)
T ss_dssp STTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00112333221 1155566777776533 2 2 56665421 13334332 357899887776
Q ss_pred C-CCCHHHHHHHH
Q 008509 350 L-GVDVFRIDSAI 361 (563)
Q Consensus 350 ~-G~~~~~ID~a~ 361 (563)
. |+++.++-.++
T Consensus 227 ~~Gid~~~v~~~~ 239 (402)
T 1dlj_A 227 SRKLNSHMIIQGI 239 (402)
T ss_dssp HTTCCHHHHHHHH
T ss_pred HhCCCHHHHHHHh
Confidence 4 89999998887
No 134
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.19 E-value=8.6e-11 Score=121.71 Aligned_cols=167 Identities=13% Similarity=0.078 Sum_probs=105.7
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
|+||+|||+|.||..+|..|+++|++|++||++++.++...+.- .....+.. ......+..+++. +.++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~-------~~~~~~~~---~~~~~~~~~~~~~~~~~~ 84 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKR-------ENVLFLKG---VQLASNITFTSDVEKAYN 84 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHT-------BCTTTSTT---CBCCTTEEEESCHHHHHT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC-------cccccccc---cccccceeeeCCHHHHHc
Confidence 44899999999999999999999999999999998876543210 00000000 0011235566666 4578
Q ss_pred CCCEEEEecCCChHHHHHHHHH----HHhhCCC-CeEEEecCCCCCHH---HHhhhccCCCceeeccc----CCCCC---
Q 008509 226 DVDMVIEAVIESVPLKQKIFSE----LEKACPP-HCILATNTSTIDLN---IVGEKTSSQDRIIGAHF----FSPAH--- 290 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~----l~~~~~~-~~ii~sntS~l~i~---~la~~~~~~~r~ig~hf----~~P~~--- 290 (563)
+||+||.|||. ....+++.+ +.+.+++ +++|++.++++.+. .+.+.+.. .+|.|. ..|..
T Consensus 85 ~aDvVilav~~--~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~---~~~~~~~~v~~gp~~~~~ 159 (366)
T 1evy_A 85 GAEIILFVIPT--QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGE---FLPSPLLSVLAGPSFAIE 159 (366)
T ss_dssp TCSSEEECCCH--HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTT---TSCGGGEEEEESSCCHHH
T ss_pred CCCEEEECCCh--HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHH---HCCCCcEEEEeCCChHHH
Confidence 99999999996 456778888 8888888 88888877666553 22222211 112111 11221
Q ss_pred ---CCCeEEEEeCCCCCHHHHHHHHHHHHHh--CCceEEecCcch
Q 008509 291 ---VMPLLEIVRTERTSAQVILDLMTVGKII--KKVPVVVGNCTG 330 (563)
Q Consensus 291 ---~~~lvEiv~~~~t~~~~~~~~~~l~~~l--Gk~~v~~~d~~G 330 (563)
..+..-++. ..+++..+.+.+++... |..+....|..+
T Consensus 160 ~~~g~~~~~~~~--~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~ 202 (366)
T 1evy_A 160 VATGVFTCVSIA--SADINVARRLQRIMSTGDRSFVCWATTDTVG 202 (366)
T ss_dssp HHTTCCEEEEEE--CSSHHHHHHHHHHHSCTTSSEEEEEESCHHH
T ss_pred HHhCCceEEEEe--cCCHHHHHHHHHHhcCCCCeEEEEEcCCchH
Confidence 112222222 24678889999999988 776666666433
No 135
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=99.18 E-value=1.9e-11 Score=121.99 Aligned_cols=90 Identities=17% Similarity=0.137 Sum_probs=84.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 168 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~------------------------------------p 211 (289)
T 3h0u_A 168 AVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFP------------------------------------R 211 (289)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 127 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~ 127 (563)
.|...+|++++.+.. +++++++.|...|..++.|+|+++++.+|++
T Consensus 212 ~a~~~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 212 DALIAAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp HHHHHHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 588899999999887 8999999999999999999999999999999
No 136
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=99.18 E-value=1.2e-11 Score=123.30 Aligned_cols=91 Identities=19% Similarity=0.162 Sum_probs=82.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||+++|.+.|.++|++++..+ +
T Consensus 171 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~------------------------------------p 214 (287)
T 3gkb_A 171 VVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALP------------------------------------D 214 (287)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSC------------------------------------T
T ss_pred HHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998854 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 130 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~ 130 (563)
.|...+|++++.. ..+++++.|...|..++.|+|+++++.+|++||+
T Consensus 215 ~a~~~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~ 261 (287)
T 3gkb_A 215 GVIEAAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGA 261 (287)
T ss_dssp THHHHHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 5888899988764 3569999999999999999999999999999986
No 137
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=99.18 E-value=1.7e-11 Score=121.51 Aligned_cols=96 Identities=13% Similarity=0.149 Sum_probs=83.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHH----HHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhh
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELL----KVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 76 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~----~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (563)
|+|||++++|+||+++||||+|||++++. +.|.+++++++..+
T Consensus 169 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~--------------------------------- 215 (272)
T 1hzd_A 169 LIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQG--------------------------------- 215 (272)
T ss_dssp HHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSC---------------------------------
T ss_pred HHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCC---------------------------------
Confidence 57899999999999999999999988754 46677777666532
Q ss_pred CCCChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 77 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 77 ~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
+.+...+|++++.+...+++++++.|...|..++.|+++++++++|++||++.
T Consensus 216 ---p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~ 268 (272)
T 1hzd_A 216 ---PVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPR 268 (272)
T ss_dssp ---HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCC
T ss_pred ---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCC
Confidence 34788899999998888999999999999999999999999999999988753
No 138
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=99.18 E-value=5.7e-12 Score=127.92 Aligned_cols=96 Identities=20% Similarity=0.208 Sum_probs=53.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||+++|++.|.++|++++..+ +
T Consensus 232 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~------------------------------------p 275 (334)
T 3t8b_A 232 IFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKS------------------------------------P 275 (334)
T ss_dssp HHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.+.. ++.+.+..|.+.+..++.|+|+++++.+|++||++..
T Consensus 276 ~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f 327 (334)
T 3t8b_A 276 QAQRMLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDW 327 (334)
T ss_dssp HHHHHHHHHHHHTCC-CC-----------------------------------
T ss_pred HHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 588899999988754 4556677888889999999999999999999998644
No 139
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.18 E-value=5.3e-11 Score=122.62 Aligned_cols=169 Identities=15% Similarity=0.049 Sum_probs=107.4
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCC-------CeEEEEeCCHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcC
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 214 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G-------~~V~l~d~~~~-----~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~ 214 (563)
.+||+|||+|.||++||..|+++| ++|++||++++ .++...+. .......+. .....+
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~--------~~~~~~~~~--~~~~~~ 77 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQ--------HENVKYLPG--HKLPPN 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHH--------SCCTTTSTT--CCCCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhc--------CcccccCCc--ccCccC
Confidence 468999999999999999999999 99999999987 55442210 000000000 001124
Q ss_pred eeeecCc-ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-----HHH----hhhccCCCceeecc
Q 008509 215 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-----NIV----GEKTSSQDRIIGAH 284 (563)
Q Consensus 215 i~~~~~~-~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i-----~~l----a~~~~~~~r~ig~h 284 (563)
+..++++ +.+++||+||.|||++ ...+++.++.+.++++++|+++++++.+ ..+ .+.+..+.-+.++
T Consensus 78 ~~~~~~~~~~~~~aD~Vilav~~~--~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~g- 154 (354)
T 1x0v_A 78 VVAVPDVVQAAEDADILIFVVPHQ--FIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVLMG- 154 (354)
T ss_dssp EEEESSHHHHHTTCSEEEECCCGG--GHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEEEC-
T ss_pred eEEEcCHHHHHcCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEEEC-
Confidence 5666776 4578999999999974 5678999999999999999988877653 122 2222211111111
Q ss_pred cCCCC---CCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch
Q 008509 285 FFSPA---HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 330 (563)
Q Consensus 285 f~~P~---~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G 330 (563)
+..+. ...+..-++. ..+++..+.+.+++...|..+.+..|..+
T Consensus 155 p~~a~~v~~g~~~~~~~~--~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 201 (354)
T 1x0v_A 155 ANIASEVADEKFCETTIG--CKDPAQGQLLKELMQTPNFRITVVQEVDT 201 (354)
T ss_dssp SCCHHHHHTTCCEEEEEE--CSSHHHHHHHHHHHCBTTEEEEEESCHHH
T ss_pred CCcHHHHHhcCCceEEEE--ECCHHHHHHHHHHhCCCCEEEEEcCCchH
Confidence 11111 1122222222 24678899999999999988777776544
No 140
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=99.18 E-value=1.6e-11 Score=122.53 Aligned_cols=96 Identities=13% Similarity=0.161 Sum_probs=82.5
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 187 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~------------------------------------~ 230 (289)
T 3t89_A 187 IWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNS------------------------------------P 230 (289)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.... ......+.|.+.+..++.|+|+++++.+|++||++..
T Consensus 231 ~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f 282 (289)
T 3t89_A 231 MALRCLKAALNADCD-GQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDF 282 (289)
T ss_dssp HHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCC
Confidence 588889999988754 2334456788889999999999999999999997654
No 141
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=99.18 E-value=1.5e-11 Score=121.90 Aligned_cols=91 Identities=12% Similarity=0.109 Sum_probs=84.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|| +++++.|.++|++++..+ +
T Consensus 186 llltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~------------------------------------~ 227 (276)
T 3rrv_A 186 YALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELP------------------------------------Q 227 (276)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 57899999999999999999999 889999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 129 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr 129 (563)
.|...+|++++.+...+++++++.|...+..++.|+|+++++.+|++||
T Consensus 228 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 228 QAVESTKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 5888999999998888899999999999999999999999999999986
No 142
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=99.17 E-value=1.2e-11 Score=122.85 Aligned_cols=93 Identities=10% Similarity=0.049 Sum_probs=69.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++.+.+.+++++++..+ +
T Consensus 170 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------p 213 (276)
T 2j5i_A 170 YIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKN------------------------------------P 213 (276)
T ss_dssp HHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHH--hcCH-HHHHHHHHHhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL--VMLD-TSRGLVHVFFAQR 129 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l--~~s~-~~~~~~~aF~~kr 129 (563)
.+...+|++++.+...+++++++.|...+..+ +.|+ |+++++.+|++||
T Consensus 214 ~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr 265 (276)
T 2j5i_A 214 VVLRAAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDK 265 (276)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC----------------
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcc
Confidence 58889999999988889999999999888776 6699 9999999999988
No 143
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.16 E-value=1.2e-10 Score=118.06 Aligned_cols=150 Identities=18% Similarity=0.205 Sum_probs=99.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.||.++|..|+.+|+ +|+++|+++++++.....+.+.. ... ...++.. +++++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~----~~~---------~~~~i~~-~d~~~~~ 66 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGT----PFT---------RRANIYA-GDYADLK 66 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG----GGS---------CCCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhh----hhc---------CCcEEEe-CCHHHhC
Confidence 479999999999999999999999 99999999988765432222211 100 0113444 4678899
Q ss_pred CCCEEEEecCCC--------------hHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhhhc-c-CCCceeecccCC
Q 008509 226 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKT-S-SQDRIIGAHFFS 287 (563)
Q Consensus 226 ~aDlVieav~e~--------------~~~k~~v~~~l~~~~~~~~ii--~sntS~l~i~~la~~~-~-~~~r~ig~hf~~ 287 (563)
+||+||+|++.. ..+++++++++.++++ ++++ +||++... +.+.... . .|.|++|+
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~-~~~~~~~~~~~~~rviG~---- 140 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAP-DSIVIVVTNPVDVL-TYFFLKESGMDPRKVFGS---- 140 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSSHHHH-HHHHHHHHTCCTTTEEEC----
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeCCcHHHH-HHHHHHHhCCChhhEEee----
Confidence 999999999853 2467889999999874 5544 34544332 3333322 2 46678776
Q ss_pred CCCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhH
Q 008509 288 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 334 (563)
Q Consensus 288 P~~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~n 334 (563)
.|..++......+.+.+|..+ ++.++++.+
T Consensus 141 --------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v~G 170 (319)
T 1a5z_A 141 --------------GTVLDTARLRTLIAQHCGFSP---RSVHVYVIG 170 (319)
T ss_dssp --------------TTHHHHHHHHHHHHHHHTCCG---GGEECCEEB
T ss_pred --------------CccHHHHHHHHHHHHHhCcCH---HHceEEEEe
Confidence 355666666667777788544 344444444
No 144
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=99.16 E-value=1.2e-11 Score=121.51 Aligned_cols=90 Identities=19% Similarity=0.195 Sum_probs=54.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 169 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 212 (258)
T 3lao_A 169 YILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAA------------------------------------P 212 (258)
T ss_dssp HHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 126 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~ 126 (563)
.|...+|++++.+...+++++++.|.+.+..++.|+|+++++.+|+
T Consensus 213 ~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 213 LAVRAALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp HHHHHHHHHHHHHTC-------------------------------
T ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 5888999999999888999999999999999999999999999995
No 145
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=99.15 E-value=1.7e-11 Score=120.90 Aligned_cols=92 Identities=17% Similarity=0.099 Sum_probs=72.7
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 167 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 210 (263)
T 3l3s_A 167 MALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARN------------------------------------Q 210 (263)
T ss_dssp HHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 128 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~k 128 (563)
.|...+|++++.+...+++++++.|.+.+..++.|+|+++++.+|-..
T Consensus 211 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~~ 258 (263)
T 3l3s_A 211 APLRRGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEGH 258 (263)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcc
Confidence 588899999999998899999999999999999999999999999753
No 146
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.15 E-value=1.6e-10 Score=117.24 Aligned_cols=173 Identities=14% Similarity=0.101 Sum_probs=114.7
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
..+||+|||+|.||+.+|..|+++|++|++| ++++.++...+ .|......-......+..+++.+.+.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~ 85 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEA-----------TGLRLETQSFDEQVKVSASSDPSAVQ 85 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHH-----------HCEEEECSSCEEEECCEEESCGGGGT
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHh-----------CCeEEEcCCCcEEEeeeeeCCHHHcC
Confidence 4579999999999999999999999999999 99887765431 11100000000112455667777789
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhhhccCCCceeecc------cCCCCCC---CCeE
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH------FFSPAHV---MPLL 295 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i-~~la~~~~~~~r~ig~h------f~~P~~~---~~lv 295 (563)
++|+||.|||.. . ..++++++.+.++++++|++.+.++.. +.+.+.++ .++++.. ...|-.. ..-
T Consensus 86 ~~D~vilavk~~-~-~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g- 160 (318)
T 3hwr_A 86 GADLVLFCVKST-D-TQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRG- 160 (318)
T ss_dssp TCSEEEECCCGG-G-HHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEE-
T ss_pred CCCEEEEEcccc-c-HHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCc-
Confidence 999999999986 3 468889999999999999999999987 45666654 4555421 1112211 100
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHH
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~ 338 (563)
.+.-+. .+..+.+.+++...|..+....|.-+.....++.
T Consensus 161 ~~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~ 200 (318)
T 3hwr_A 161 ELVIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAKLIL 200 (318)
T ss_dssp EEEECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHH
T ss_pred eEEEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHH
Confidence 111122 2345667788888888877777776655555543
No 147
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.15 E-value=8.9e-11 Score=117.24 Aligned_cols=168 Identities=10% Similarity=-0.054 Sum_probs=109.2
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
+||+|||+|.||+.+|..|+++|++|++||++++.++. +...+. .. ......+. .++.+.++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~-----------l~~~~~-~~---~~~~~~~~-~~~~~~~~~~ 64 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCS-----------VNLVET-DG---SIFNESLT-ANDPDFLATS 64 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEE-----------EEEECT-TS---CEEEEEEE-ESCHHHHHTC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceee-----------EEEEcC-CC---ceeeeeee-ecCccccCCC
Confidence 37999999999999999999999999999999765332 011110 00 00000111 2344677899
Q ss_pred CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH-HHhhhccCCCcee-ecccC-----CC-CC---CCCeEE
Q 008509 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII-GAHFF-----SP-AH---VMPLLE 296 (563)
Q Consensus 228 DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~-~la~~~~~~~r~i-g~hf~-----~P-~~---~~~lvE 296 (563)
|+||.|+|... -.+++.++.+.++++++|++.++++... .+.+.+. . ++ |.+++ .| +. ... +.
T Consensus 65 d~vi~~v~~~~--~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p~~~~~~~g~-~~ 138 (291)
T 1ks9_A 65 DLLLVTLKAWQ--VSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGNVIIHVANGI-TH 138 (291)
T ss_dssp SEEEECSCGGG--HHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETTEEEEEECCC-EE
T ss_pred CEEEEEecHHh--HHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCCEEEEecccc-eE
Confidence 99999999874 4678899999999999888877777654 4444442 2 44 44432 23 10 111 22
Q ss_pred EEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHH
Q 008509 297 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338 (563)
Q Consensus 297 iv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~ 338 (563)
+.... .+++..+.+.++++..|..+.+++|..+...+.+..
T Consensus 139 i~~~~-~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~ 179 (291)
T 1ks9_A 139 IGPAR-QQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAV 179 (291)
T ss_dssp EEESS-GGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHH
T ss_pred EccCC-CCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHee
Confidence 22221 245667888999999999888887766655555543
No 148
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=99.15 E-value=1.2e-10 Score=117.57 Aligned_cols=121 Identities=15% Similarity=0.252 Sum_probs=84.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.. .......++..++|++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~------------~~~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEAS------------PIEGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTH------------HHHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhH------------hhcCCCeEEEECCCHHHHCC
Confidence 689999999999999999999997 99999999887763222111110 00111235777788999999
Q ss_pred CCEEEEec--------------CCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhc----c-CCCceeec
Q 008509 227 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 283 (563)
Q Consensus 227 aDlVieav--------------~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~----~-~~~r~ig~ 283 (563)
||+||+++ .++..+++++++.+.+++ +++++... |.|++.+...+ . .|.|++|+
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~--tNPv~~~t~~~~~~~~~~~~rviG~ 143 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMV--NNPLDAMTYLAAEVSGFPKERVIGQ 143 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEEC--CSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEc--CCchHHHHHHHHHHcCCCHHHEEEC
Confidence 99999997 455678889999999987 66655321 33554443332 1 24577775
No 149
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.14 E-value=1.4e-09 Score=113.75 Aligned_cols=204 Identities=17% Similarity=0.169 Sum_probs=126.8
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH--------HHHHHHHHHHcCCCCHHHHHhhhcCeee
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKG 217 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~--------i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 217 (563)
.+.+|+|||+|.+|..+|.+|+..|++|+.+|+|+++++...+. +...+.+.++. .++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~------------g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSS------------GRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHT------------TCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHc------------CCeeE
Confidence 47899999999999999999999999999999999998875422 12223333333 35788
Q ss_pred ecCc-ccccCCCEEEEecCC--------ChHHHHHHHHHHHhhCC---CCeEEEecCCCCCHH---HHhh-hccCCCcee
Q 008509 218 VLDY-SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACP---PHCILATNTSTIDLN---IVGE-KTSSQDRII 281 (563)
Q Consensus 218 ~~~~-~~l~~aDlVieav~e--------~~~~k~~v~~~l~~~~~---~~~ii~sntS~l~i~---~la~-~~~~~~r~i 281 (563)
+++. +++++||++|.|||. |+.......+.+.++++ ++++|+. -||.++. ++.. .+.....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~-eSTVppGtte~~~~~~l~~~~~-- 164 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVV-KSTVPPGTTEGLVARAVAEEAG-- 164 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEE-CSCCCTTTTTTHHHHHHHTTTT--
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEE-eCCCCCchHHHHHHHHHHHhCC--
Confidence 8887 468999999999974 33344556667766664 3455543 4454443 2211 1111100
Q ss_pred eccc---CCCCCCCCe----------EEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch----hhhHHHH---HHHH
Q 008509 282 GAHF---FSPAHVMPL----------LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----FAVNRAF---FPYS 341 (563)
Q Consensus 282 g~hf---~~P~~~~~l----------vEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G----fi~nRl~---~~~~ 341 (563)
|..| ++|-...+. -.++.+ +++...+.+..+++.+....+++.-... .+.|-.+ .+++
T Consensus 165 ~~~f~v~~~PErl~eG~a~~d~~~~~riViG~--~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~ 242 (444)
T 3vtf_A 165 GVKFSVASNPEFLREGSALEDFFKPDRIVIGA--GDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFA 242 (444)
T ss_dssp TCCCEEEECCCCCCTTSHHHHHHSCSCEEEEE--SSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeecCcccccCCccccccccCCcEEEcC--CCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHH
Confidence 2222 234322111 012232 4677888888888887765555432222 3334332 3679
Q ss_pred HHHHHHHHC-CCCHHHHHHHH-H--hcCC
Q 008509 342 QSARLLVSL-GVDVFRIDSAI-R--SFGL 366 (563)
Q Consensus 342 ~Ea~~l~~~-G~~~~~ID~a~-~--~~G~ 366 (563)
||...+.+. |+++.++=+++ . .+|+
T Consensus 243 NEla~ice~~GiDv~eV~~a~~~d~rig~ 271 (444)
T 3vtf_A 243 NEVGLLAKRLGVDTYRVFEAVGLDKRIGR 271 (444)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHTSTTSCS
T ss_pred HHHHHHHHHcCCCHHHHHHHhccCCCCCC
Confidence 998777654 99998887777 3 5554
No 150
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=99.14 E-value=3.5e-11 Score=119.14 Aligned_cols=93 Identities=13% Similarity=0.050 Sum_probs=77.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 214 (272)
T 3qk8_A 171 YLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGA------------------------------------Q 214 (272)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998853 3
Q ss_pred hhHHHHHHHHHHhhc---cCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIV---HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~---~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.... .++++.++.| ..++.|+|+++++.+|++||++..
T Consensus 215 ~a~~~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~f 266 (272)
T 3qk8_A 215 NAIRWTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPARF 266 (272)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCCC
Confidence 588889998887554 2344444444 578899999999999999997644
No 151
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.14 E-value=1.3e-10 Score=120.67 Aligned_cols=168 Identities=11% Similarity=-0.022 Sum_probs=107.8
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCC-------CeEEEEeCCHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcC
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 214 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G-------~~V~l~d~~~~-----~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~ 214 (563)
++||+|||+|.||++||..|+++| ++|++||++++ .++...+ ........+. ......
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~--------~~~~~~~~~~--~~~~~~ 90 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINN--------KHENTKYLKG--VPLPHN 90 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHH--------HCBCTTTSTT--CBCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHh--------cCcccccCCc--ccCcCC
Confidence 468999999999999999999999 99999999987 5443211 0000000000 001124
Q ss_pred eeeecCc-ccccCCCEEEEecCCChHHHHHHHHHHHh----hCCCCeEEEecCCCCCH-----HHHhhhcc--CCCceee
Q 008509 215 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEK----ACPPHCILATNTSTIDL-----NIVGEKTS--SQDRIIG 282 (563)
Q Consensus 215 i~~~~~~-~~l~~aDlVieav~e~~~~k~~v~~~l~~----~~~~~~ii~sntS~l~i-----~~la~~~~--~~~r~ig 282 (563)
+..+++. +++++||+||.|||. ....+++.++.+ .++++++++++++++.+ ..+.+.+. .+..+.
T Consensus 91 i~~~~~~~ea~~~aDvVilav~~--~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~- 167 (375)
T 1yj8_A 91 IVAHSDLASVINDADLLIFIVPC--QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCS- 167 (375)
T ss_dssp EEEESSTHHHHTTCSEEEECCCH--HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEE-
T ss_pred eEEECCHHHHHcCCCEEEEcCCH--HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEE-
Confidence 6667777 467899999999996 467788999988 88899999998877655 12222211 011110
Q ss_pred cccCCCCC------CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcch
Q 008509 283 AHFFSPAH------VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 330 (563)
Q Consensus 283 ~hf~~P~~------~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~G 330 (563)
-...|.. ..+..-++.+ .+++..+.+.+++...|..+....|..|
T Consensus 168 -v~~gp~~a~~v~~g~~~~~~~~~--~~~~~~~~v~~ll~~~g~~~~~~~di~~ 218 (375)
T 1yj8_A 168 -ALSGANIAMDVAMENFSEATIGG--NDKDSLVIWQRVFDLPYFKINCVNETIE 218 (375)
T ss_dssp -EEECSCCHHHHHTTCCEEEEEEC--SCHHHHHHHHHHHCBTTEEEEEESCSHH
T ss_pred -EEeCCchHHHHHhCCCeEEEEec--CCHHHHHHHHHHhCCCCeEEEEeCCcHH
Confidence 0011211 1222222222 4678889999999998988887777654
No 152
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=99.10 E-value=2.2e-11 Score=119.44 Aligned_cols=96 Identities=18% Similarity=0.184 Sum_probs=69.7
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.++|++++..+ +
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 199 (256)
T 3pe8_A 156 MSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNN------------------------------------Q 199 (256)
T ss_dssp HHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHH---hcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL---VMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l---~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|...+|++++.+...+++++++.|...|.++ ..+++.++++.+|++|+++.
T Consensus 200 ~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~~ 254 (256)
T 3pe8_A 200 KAVRALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRSQ 254 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCcc
Confidence 58889999999998889999999999998765 55667799999999998753
No 153
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=99.09 E-value=7.2e-11 Score=116.43 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=78.7
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||+.+ +.+.+++++++..+ +
T Consensus 163 llltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~------------------------------------p 204 (267)
T 3hp0_A 163 MTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLN------------------------------------K 204 (267)
T ss_dssp HHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCC------------------------------------H
Confidence 578999999999999999999998644 34678888887743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
.|...+|++++... .+.+++++.|.+.+..++.|+|+++++.+|++||++...
T Consensus 205 ~a~~~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~~ 257 (267)
T 3hp0_A 205 KGIAHYKQFMSSLD-HQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPWE 257 (267)
T ss_dssp HHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC---
T ss_pred HHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCC
Confidence 58889999998864 346788889999999999999999999999999987664
No 154
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=99.09 E-value=7.2e-11 Score=115.73 Aligned_cols=91 Identities=9% Similarity=0.072 Sum_probs=74.2
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.+.+++++++..+ +
T Consensus 159 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 202 (254)
T 3isa_A 159 ILGSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALD------------------------------------P 202 (254)
T ss_dssp HHTTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999988743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
.|...+|+++. ++.++.|.+.|..++.|+++++++.+|++||++...
T Consensus 203 ~a~~~~K~~l~-------~~~~~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~ 249 (254)
T 3isa_A 203 ATRATLHRVLR-------DDHDDADLAALARSAAQPGFKARIRDYLAQPAAEGH 249 (254)
T ss_dssp HHHHHHHHHHS-------CCCHHHHHHHHHHHHHSTTHHHHHHHHHHC------
T ss_pred HHHHHHHHHHh-------hhhHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCC
Confidence 46667777662 345677889999999999999999999999987553
No 155
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.09 E-value=9e-10 Score=111.40 Aligned_cols=166 Identities=12% Similarity=0.017 Sum_probs=105.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-----C-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHH-HHHhhhcCeeeec
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-----N-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVL 219 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-----G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~ 219 (563)
.+||+|||+|.||+.+|..|+++ | ++|++||+ ++.++...+ +.|..... .-......+..++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~ 76 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRA----------AGGLRVVTPSRDFLARPTCVTD 76 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHH----------HTSEEEECSSCEEEECCSEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHh----------cCCeEEEeCCCCeEEecceEec
Confidence 36899999999999999999999 9 99999999 666554321 01210000 0000001223345
Q ss_pred CcccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH-HHHhhhccCCCcee-ecccCCCCCC------
Q 008509 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHV------ 291 (563)
Q Consensus 220 ~~~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i-~~la~~~~~~~r~i-g~hf~~P~~~------ 291 (563)
+.+.+.++|+||.||+... -.+++.++.+.++++++|++.+.++.. ..+++.+... +++ |+.++. +..
T Consensus 77 ~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~-~v~~g~~~~~-a~~~~pg~~ 152 (317)
T 2qyt_A 77 NPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDT-VVWKGCVYIS-ARKSAPGLI 152 (317)
T ss_dssp CHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTT-TBCEEEEEEE-EEEEETTEE
T ss_pred CccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCC-cEEEEEEEEE-EEEcCCCEE
Confidence 5566789999999999775 367888898888888888887777776 4566655432 333 333221 111
Q ss_pred ---CCe-EEEEeC--CCCCHHHHHHHHHHHHHhCCceEEecCc
Q 008509 292 ---MPL-LEIVRT--ERTSAQVILDLMTVGKIIKKVPVVVGNC 328 (563)
Q Consensus 292 ---~~l-vEiv~~--~~t~~~~~~~~~~l~~~lGk~~v~~~d~ 328 (563)
... .-++.. ...+.+.. .+.+++...|....+..|.
T Consensus 153 ~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di 194 (317)
T 2qyt_A 153 TLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDI 194 (317)
T ss_dssp EEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCH
T ss_pred EEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHH
Confidence 111 111322 33456777 8899999999877776653
No 156
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=99.08 E-value=8.7e-11 Score=115.47 Aligned_cols=91 Identities=16% Similarity=0.148 Sum_probs=79.3
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|++ ++.|.++|++++..+ +
T Consensus 171 llltG~~i~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~------------------------------------p 210 (264)
T 3he2_A 171 MLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIARLA------------------------------------P 210 (264)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECC----HHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCccHHHHHHCCCeEEEec----HHHHHHHHHHHHcCC------------------------------------H
Confidence 578999999999999999999986 467899999988743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.|...+|++++.. .+++++++.|.+.+..++.|+|+++++.+|++||++..
T Consensus 211 ~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f 261 (264)
T 3he2_A 211 LAIQHAKRVLNDD--GAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKF 261 (264)
T ss_dssp HHHHHHHHHHHTS--SCSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 5888999999886 36778899999999999999999999999999997643
No 157
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.06 E-value=1.6e-09 Score=110.69 Aligned_cols=154 Identities=14% Similarity=0.060 Sum_probs=92.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCC---CCHHHHHhhhcCeeeecCcccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK---LTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~---~~~~~~~~~~~~i~~~~~~~~l 224 (563)
+||+|||+|.||+.||..|+++|++|++||+++++++...+ .|. +... .+ .+..+++.+++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~-----------~g~~~~~~~~----~~-~~~~~~~~~~~ 78 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINV-----------SHTSPYVEES----KI-TVRATNDLEEI 78 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------HSCBTTBTTC----CC-CSEEESCGGGC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH-----------hCCcccCCCC----ee-eEEEeCCHHHh
Confidence 68999999999999999999999999999999887765321 121 0000 00 34556666458
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH---HHhhhcc--CCCceeecccCCCCC-----CCCe
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS--SQDRIIGAHFFSPAH-----VMPL 294 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~---~la~~~~--~~~r~ig~hf~~P~~-----~~~l 294 (563)
.++|+||.|||. .. -.+++.++.+ +++++++.+.++++. .+++.+. .+.. ......|.. ...+
T Consensus 79 ~~aDvVil~vk~-~~-~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~--~~~~~~P~~~~~~~~g~~ 151 (335)
T 1z82_A 79 KKEDILVIAIPV-QY-IREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCP--YAVLSGPSHAEEVAKKLP 151 (335)
T ss_dssp CTTEEEEECSCG-GG-HHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCC--EEEEESSCCHHHHHTTCC
T ss_pred cCCCEEEEECCH-HH-HHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCc--eEEEECCccHHHHhCCCc
Confidence 899999999995 33 3455555443 677777766555432 2332221 0100 000011221 1221
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCc
Q 008509 295 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 328 (563)
Q Consensus 295 vEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~ 328 (563)
..++.+.. + .+.+.+++...|..+.+..|.
T Consensus 152 ~~~~~g~~-~---~~~~~~ll~~~g~~~~~~~di 181 (335)
T 1z82_A 152 TAVTLAGE-N---SKELQKRISTEYFRVYTCEDV 181 (335)
T ss_dssp EEEEEEET-T---HHHHHHHHCCSSEEEEEESCH
T ss_pred eEEEEEeh-h---HHHHHHHhCCCCEEEEecCch
Confidence 22222211 2 678888998888877776664
No 158
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=99.06 E-value=6.5e-11 Score=115.26 Aligned_cols=90 Identities=14% Similarity=0.081 Sum_probs=82.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|+|++++.+.+.+++++++..+ +
T Consensus 154 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 197 (243)
T 2q35_A 154 MIYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSP------------------------------------R 197 (243)
T ss_dssp HHHHCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999988743 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 126 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~ 126 (563)
.+...+|++++.+...+++++++.|.+.+..++.|+|+++++.+||
T Consensus 198 ~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 198 LSLVALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 5788899999988877889999999999999999999999999886
No 159
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.06 E-value=2.7e-10 Score=114.59 Aligned_cols=232 Identities=14% Similarity=0.124 Sum_probs=128.3
Q ss_pred HHHHHHHhCCceEEecCcchhhhHHHHHHHHHHHHHHHHCCC-C-HHHHHHHHHhcCCCccHHHHhh-hhc---------
Q 008509 311 LMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-D-VFRIDSAIRSFGLPIGPFQLLD-LAG--------- 378 (563)
Q Consensus 311 ~~~l~~~lGk~~v~~~d~~Gfi~nRl~~~~~~Ea~~l~~~G~-~-~~~ID~a~~~~G~p~GPf~~~D-~~G--------- 378 (563)
+...+...|..++...-.+. ..++....+-...-.+++.|. + ....+..+..+.+. . .+.| .-+
T Consensus 21 iA~~~a~~G~~V~l~D~~~~-~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~--~l~~a~~~ad~ViEav~ 96 (319)
T 3ado_A 21 WAMLFASGGFRVKLYDIEPR-QITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-T--NLAEAVEGVVHIQECVP 96 (319)
T ss_dssp HHHHHHHTTCCEEEECSCHH-HHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-C--CHHHHTTTEEEEEECCC
T ss_pred HHHHHHhCCCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-c--chHhHhccCcEEeeccc
Confidence 33445566876666543343 344444434344445666664 2 22344444322211 1 1111 112
Q ss_pred --hHHHHHHHHHHHHhCCCCCC----chHH-HHHHHH-cCCCCcccCccccccCCCCC-------CCCCCCchhHHHHHh
Q 008509 379 --YGVAAATSKEFDKAFPDRSF----QSPL-VDLLLK-SGRNGKANGKGLYTYEKGSK-------PKPDPSVLPIIEECR 443 (563)
Q Consensus 379 --ld~~~~~~~~l~~~~~~~~~----~~~~-l~~l~~-~g~~G~k~g~GFY~y~~~~~-------~~~~~~~~~~~~~~~ 443 (563)
+++=.++.+.+.+..++... +|.+ +.+|.+ ..+..+..|-+||++..-.+ ...++++........
T Consensus 97 E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~ 176 (319)
T 3ado_A 97 ENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALM 176 (319)
T ss_dssp SCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCCcHHHHHHHHHHH
Confidence 23333445555444443321 2333 455543 35677888999999765321 344554433322221
Q ss_pred hhccCCCCCC-Cc---ccchHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCcHhHHHHHhCHHHHH
Q 008509 444 RLSNIMPGGK-PI---SVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVY 519 (563)
Q Consensus 444 ~~~~~~~~~~-~~---~~~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p~~~gGp~~~~d~~G~~~~~ 519 (563)
. ..++ +. .-+++||+||++.+++|||+++++||++ |++|||.+|++|+|||.-.-|||+++|..|.+...
T Consensus 177 ~-----~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGva-s~edID~~~~~g~g~~~a~mGPf~~~Dl~G~~~~~ 250 (319)
T 3ado_A 177 R-----KIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLS 250 (319)
T ss_dssp H-----HTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTTTSHHH
T ss_pred H-----HhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCCCCcchhhhhhhcCccHHH
Confidence 1 1122 22 1268999999999999999999999999 99999999999999871112999999999976543
Q ss_pred H------HHHHHHHHhCCCCCCCHHHHHHHH-cCCCccCCCCC
Q 008509 520 T------SLKKWSQLYGNFFKPSRFLEERAT-KGIPLSAPVSS 555 (563)
Q Consensus 520 ~------~~~~~~~~~~~~~~p~~~l~~~~~-~g~~f~~~~~~ 555 (563)
. .++.+...++ ..+.+..++.. .++|||.+.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~---~~p~~~~~~~~k~~~g~~~~~~~ 290 (319)
T 3ado_A 251 YCDRYSEGMKRVLKSFG---SIPEFSGATVEKVNQAMCKKVPA 290 (319)
T ss_dssp HHHHHHHHHHHHHHTCC---CCCCCCHHHHHHHHHHHHHHSCS
T ss_pred HHHHhhHhHHHHHHHcC---cccccchHHHHHHHHHHhhcCCC
Confidence 2 2233333333 22222233332 36778877544
No 160
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=99.04 E-value=3.2e-10 Score=114.21 Aligned_cols=120 Identities=19% Similarity=0.298 Sum_probs=81.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.||.++|..++..|+ +|+++|+++++++..... ..... . .. ...++.. +++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~--------l~~~~-~---~~-~~~~i~~-~~~~a~~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAED--------IAHAA-P---VS-HGTRVWH-GGHSELA 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHH--------HTTSC-C---TT-SCCEEEE-ECGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHh--------hhhhh-h---hc-CCeEEEE-CCHHHhC
Confidence 489999999999999999999999 999999998766531111 11111 0 00 0112333 5778999
Q ss_pred CCCEEEEec--CC------------ChHHHHHHHHHHHhhCCCCeEE--EecCCCCCHHHHhhhccCCCceeec
Q 008509 226 DVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSSQDRIIGA 283 (563)
Q Consensus 226 ~aDlVieav--~e------------~~~~k~~v~~~l~~~~~~~~ii--~sntS~l~i~~la~~~~~~~r~ig~ 283 (563)
+||+||+++ |. +..+++++++++.+++ +++++ +||++.+....++... .|.|++|+
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 999999999 43 4567889999999986 56554 4665554433344444 67788776
No 161
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=99.03 E-value=5.2e-10 Score=112.67 Aligned_cols=120 Identities=13% Similarity=0.203 Sum_probs=83.4
Q ss_pred eEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 149 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 149 kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.. ...+ ...++..++|++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~---~~~~---------~~~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAA---AELG---------VDIRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHH---HHHT---------CCCCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhh---hhcC---------CCeEEEECCCHHHhCCC
Confidence 69999999999999999999898 79999999887754222221111 0000 12357777889999999
Q ss_pred CEEEEe--------------cCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhcc----C-CCceeec
Q 008509 228 DMVIEA--------------VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS----S-QDRIIGA 283 (563)
Q Consensus 228 DlViea--------------v~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~----~-~~r~ig~ 283 (563)
|+||++ +..+..+++++.+++.+++ |++++... |.|++.+...+. . |.|++|+
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~~~k~~~~p~~rviG~ 140 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVIT--TNPVDAMTYVMYKKTGFPRERVIGF 140 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC--CSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe--CCchHHHHHHHHHhcCCChhhEEEe
Confidence 999999 4556677889999999997 55533322 236665554432 2 4567665
No 162
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=99.01 E-value=3.2e-10 Score=116.78 Aligned_cols=129 Identities=12% Similarity=0.117 Sum_probs=83.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccC------------------Cc----cchhccccCC-CC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR------------------KP----WIRSLHRTDK-LG 57 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~------------------~p----~~~~~~~~~~-~~ 57 (563)
|+|||++++|+||+++||||+|||+++|.+.+..+++ +...+ .| .......... +.
T Consensus 165 l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~f~ 243 (363)
T 3bpt_A 165 LALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLA-LKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFS 243 (363)
T ss_dssp HHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHHTT
T ss_pred HHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHHhC
Confidence 5789999999999999999999999998765544432 11000 00 0000000000 00
Q ss_pred ChHHHHHHHH--------HHHHHHHh-hCCCChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHh-h
Q 008509 58 SLSEAREVLK--------LARLQAKK-TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF-A 127 (563)
Q Consensus 58 ~~~~~~~~~~--------~~~~~~~~-~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~-~ 127 (563)
.+ .....++ .++...++ ..+.+.|+..+|++++.+...+++++++.|.+.+..++.|+|+++++++|+ +
T Consensus 244 ~~-~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl~e 322 (363)
T 3bpt_A 244 AN-TVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVLID 322 (363)
T ss_dssp SS-SHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHTTS
T ss_pred CC-CHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhheeeC
Confidence 00 0111111 11122222 334566889999999999988999999999999999999999999999999 6
Q ss_pred h-hhh
Q 008509 128 Q-RAT 131 (563)
Q Consensus 128 k-r~~ 131 (563)
| |++
T Consensus 323 K~r~P 327 (363)
T 3bpt_A 323 KDQSP 327 (363)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 6 543
No 163
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.00 E-value=3.7e-09 Score=107.82 Aligned_cols=163 Identities=14% Similarity=0.070 Sum_probs=104.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCC-CCHHHHHhhhcCeeeec--Cc-
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVL--DY- 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~~~~~~i~~~~--~~- 221 (563)
+||+|||+|.||+.+|..|+++|++|++||+ +++.++... +.|. +... . . +..+..++ ++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~g-~-~-~~~~~~~~~~~~~ 66 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-----------AGREHPRLG-V-K-LNGVEIFWPEQLE 66 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-----------TTCCBTTTT-B-C-CCSEEEECGGGHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHH-----------HhCcCcccC-c-c-ccceEEecHHhHH
Confidence 3799999999999999999999999999999 888766532 2221 0000 0 0 02334555 55
Q ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC------CHHHHhhhccC--CCceeecccCCCCC---
Q 008509 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI------DLNIVGEKTSS--QDRIIGAHFFSPAH--- 290 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l------~i~~la~~~~~--~~r~ig~hf~~P~~--- 290 (563)
+.+++||+||.|+|.. ...+++.++.+ ++++++|++.+.++ ....+++.+.. +....+.....|..
T Consensus 67 ~~~~~~D~vi~~v~~~--~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~ 143 (335)
T 1txg_A 67 KCLENAEVVLLGVSTD--GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIARE 143 (335)
T ss_dssp HHHTTCSEEEECSCGG--GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHH
T ss_pred HHHhcCCEEEEcCChH--HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHH
Confidence 4578999999999976 45688888988 88899888776555 23445554432 11000111122322
Q ss_pred ---CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcc
Q 008509 291 ---VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 329 (563)
Q Consensus 291 ---~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~ 329 (563)
..+.. ++.+. .+++..+.+.++++..|..+.+..|..
T Consensus 144 ~~~g~~~~-~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di~ 183 (335)
T 1txg_A 144 VAKRMPTT-VVFSS-PSESSANKMKEIFETEYFGVEVTTDII 183 (335)
T ss_dssp HHTTCCEE-EEEEC-SCHHHHHHHHHHHCBTTEEEEEESCHH
T ss_pred HHccCCcE-EEEEe-CCHHHHHHHHHHhCCCcEEEEecCchH
Confidence 11112 22222 367889999999998888777776643
No 164
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.99 E-value=9.4e-10 Score=112.42 Aligned_cols=170 Identities=11% Similarity=0.115 Sum_probs=106.4
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
++||+|||+|.||+.+|..|+++|++|++|+++ +.++... +.|......-......+..+++.+.+.+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQ-----------TAGLRLTEDGATHTLPVRATHDAAALGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHH-----------HTCEEEEETTEEEEECCEEESCHHHHCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHH-----------HCCCEEecCCCeEEEeeeEECCHHHcCC
Confidence 478999999999999999999999999999995 4444321 2221000000001123445667777899
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC-------------------HH-HHhhhccCCCceeec-cc
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-------------------LN-IVGEKTSSQDRIIGA-HF 285 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~-------------------i~-~la~~~~~~~r~ig~-hf 285 (563)
+|+||.|||.. . ..++++++.+.++++++|++.+.+++ .. .+.+.++ ..++++. -+
T Consensus 71 ~D~Vilavk~~-~-~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~-~~~v~~gv~~ 147 (335)
T 3ghy_A 71 QDVVIVAVKAP-A-LESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP-TRHVLGCVVH 147 (335)
T ss_dssp CSEEEECCCHH-H-HHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC-GGGEEEEEEC
T ss_pred CCEEEEeCCch-h-HHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC-cccEEEEEEE
Confidence 99999999874 3 44788888888999999988777753 11 3445443 2344432 11
Q ss_pred -----CCCCC---CC-CeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchh
Q 008509 286 -----FSPAH---VM-PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 331 (563)
Q Consensus 286 -----~~P~~---~~-~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gf 331 (563)
..|-. .. .-+.+-.....+.+..+.+.+++...|.......|.-+.
T Consensus 148 ~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~ 202 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRD 202 (335)
T ss_dssp CCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHH
T ss_pred EEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHH
Confidence 11211 11 112222222334567788888899888877776775553
No 165
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.99 E-value=4.2e-10 Score=117.23 Aligned_cols=154 Identities=10% Similarity=0.042 Sum_probs=109.5
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC------CCeEEEEeCCHH-HHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN------NIYVVLKEVNSE-YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~------G~~V~l~d~~~~-~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
+++|+|||.|.||.++|..|.++ |++|++.+++.+ ..+.+ .+.|.... +. ...+
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A-----------~e~G~~v~-------d~-ta~s 114 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEA-----------RAAGFTEE-------SG-TLGD 114 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHH-----------HHTTCCTT-------TT-CEEE
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHH-----------HHCCCEEe-------cC-CCCC
Confidence 37899999999999999999999 999988776543 22222 12332110 00 0112
Q ss_pred CcccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhh---hccCCCceeecccCCCCCC-----
Q 008509 220 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV----- 291 (563)
Q Consensus 220 ~~~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~---~~~~~~r~ig~hf~~P~~~----- 291 (563)
..+++++||+||.++|.... .+++.++.+.++++++| +..+++++..+.+ ..+....++-.||..|.+.
T Consensus 115 ~aEAa~~ADVVILaVP~~~~--~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y 191 (525)
T 3fr7_A 115 IWETVSGSDLVLLLISDAAQ--ADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLY 191 (525)
T ss_dssp HHHHHHHCSEEEECSCHHHH--HHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHH
T ss_pred HHHHHhcCCEEEECCChHHH--HHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHH
Confidence 23678899999999997543 46888999999999985 7788888888775 3333457999999888763
Q ss_pred ----------CCeEEEEeCCCCCHHHHHHHHHHHHHhCCceE
Q 008509 292 ----------MPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 323 (563)
Q Consensus 292 ----------~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v 323 (563)
++.+ +......+.+..+.+..++..+|...+
T Consensus 192 ~~G~~~~g~Gv~~l-iAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 192 VQGKEINGAGINSS-FAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHTTSTTCSCCEE-EEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred hcccccccCCccEE-EEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 3412 233344566889999999999998754
No 166
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=98.94 E-value=4.6e-10 Score=111.19 Aligned_cols=86 Identities=19% Similarity=0.255 Sum_probs=76.0
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++.+.|.++|++++..+ +
T Consensus 179 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 222 (277)
T 4di1_A 179 LVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECP------------------------------------P 222 (277)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999988743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 132 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~ 132 (563)
.|+..+|++++.+...+++++++.|...|..++.|+ +||++.
T Consensus 223 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~----------ekR~P~ 264 (277)
T 4di1_A 223 RALAAAKAVINDVFELEATERAAAERRRYVELFAAG----------QRGPDG 264 (277)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG----------GC----
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc----------ccCCCc
Confidence 689999999999999999999999999999999998 777664
No 167
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.93 E-value=8.8e-09 Score=104.11 Aligned_cols=174 Identities=11% Similarity=0.034 Sum_probs=110.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCC-CHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+||+|||+|.||+.+|..|+++|++|++|++++ .+... +.|.. ....-...+..+..+++.+.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~-----------~~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIA-----------GNGLKVFSINGDFTLPHVKGYRAPEEIGP 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHH-----------HTCEEEEETTCCEEESCCCEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHH-----------hCCCEEEcCCCeEEEeeceeecCHHHcCC
Confidence 689999999999999999999999999999986 23211 22210 00000000012334566667889
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC-HHHHhhhccCCCceeecc------cCCCCC---CCC-eE
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-LNIVGEKTSSQDRIIGAH------FFSPAH---VMP-LL 295 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~-i~~la~~~~~~~r~ig~h------f~~P~~---~~~-lv 295 (563)
+|+||.||+... -.++++++.+.+.++++|++...++. .+.+.+.++. .++++.- ...|-. ..+ .+
T Consensus 70 ~D~vilavk~~~--~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~ 146 (312)
T 3hn2_A 70 MDLVLVGLKTFA--NSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRI 146 (312)
T ss_dssp CSEEEECCCGGG--GGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEE
T ss_pred CCEEEEecCCCC--cHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeE
Confidence 999999998664 34788999999999999999888886 4556665542 3444321 111211 111 12
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHH
Q 008509 296 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAF 337 (563)
Q Consensus 296 Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~ 337 (563)
.+...+..+.+..+.+.+++...|.......|.-+.....++
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~ 188 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLV 188 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHH
Confidence 222333345677788888999888877776675554444443
No 168
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=98.93 E-value=6.7e-10 Score=115.71 Aligned_cols=129 Identities=9% Similarity=-0.005 Sum_probs=84.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHH---H----------------HHHHHHhhhccC---Cccchhc---cccCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLK---V----------------SRLWALDIAARR---KPWIRSL---HRTDK 55 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~---~----------------A~~~a~~~~~~~---~p~~~~~---~~~~~ 55 (563)
|+|||++++|+||+++||||+|||+++|.+ + +.++++++.... .|..... .....
T Consensus 205 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~~~I~~ 284 (407)
T 3ju1_A 205 LGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQEMIDR 284 (407)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTHHHHHH
T ss_pred HHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHHHHHHH
Confidence 578999999999999999999999999877 3 444443322110 0000000 00000
Q ss_pred -CCChHHHHHHHH----------HHHHHHH-hhCCCChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHH
Q 008509 56 -LGSLSEAREVLK----------LARLQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVH 123 (563)
Q Consensus 56 -~~~~~~~~~~~~----------~~~~~~~-~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~ 123 (563)
+. .....+++ .++...+ -..+.+.++..+|++++.+...+++++++.|.+.+..++.++|++++++
T Consensus 285 ~f~--~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGvr 362 (407)
T 3ju1_A 285 LMA--GSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAKGDFCEGVR 362 (407)
T ss_dssp HTC--SCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHSSHHHHHH
T ss_pred Hhc--CCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 00 00001110 1111111 2234678999999999999999999999999999999999999999999
Q ss_pred HHh-hh-hhh
Q 008509 124 VFF-AQ-RAT 131 (563)
Q Consensus 124 aF~-~k-r~~ 131 (563)
+|+ +| |++
T Consensus 363 AflidKdr~P 372 (407)
T 3ju1_A 363 ALLIDKDKQP 372 (407)
T ss_dssp HHTTSCCCCC
T ss_pred HHHhcCCcCC
Confidence 999 77 543
No 169
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.92 E-value=4.9e-09 Score=105.60 Aligned_cols=102 Identities=21% Similarity=0.256 Sum_probs=70.9
Q ss_pred ccceeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCC--HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 145 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~--~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
++.+||+|||+|.||.++|..++..|+ +|+++|++ ++.++.....+.+.. .......++..++++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~------------~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEAS------------PVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHH------------HHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhh------------hhccCCCEEEEcCCH
Confidence 345799999999999999999999999 99999999 444332111111110 011123467778889
Q ss_pred ccccCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEE
Q 008509 222 SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILA 259 (563)
Q Consensus 222 ~~l~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~ 259 (563)
+++++||+||+++.. +..+.+++...+.++++ ++++.
T Consensus 74 ~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vl 124 (315)
T 3tl2_A 74 ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIV 124 (315)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEE
T ss_pred HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEE
Confidence 999999999999721 33455677777888874 55444
No 170
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.92 E-value=9.5e-09 Score=103.71 Aligned_cols=119 Identities=18% Similarity=0.262 Sum_probs=79.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCcccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~l 224 (563)
+||+|||+|.||.++|..|+.+| ++|+++|+++++++.....+.+.. . . ....+.. +++++++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~----~---~-------~~~~~~~~~~d~~~~ 67 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM----A---N-------LEAHGNIVINDWAAL 67 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG----G---G-------SSSCCEEEESCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh----h---h-------cCCCeEEEeCCHHHh
Confidence 68999999999999999999999 799999999987765432221110 0 0 0012233 4677889
Q ss_pred cCCCEEEEecCCCh------------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHh---hhc-c-CCCcee
Q 008509 225 KDVDMVIEAVIESV------------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG---EKT-S-SQDRII 281 (563)
Q Consensus 225 ~~aDlVieav~e~~------------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la---~~~-~-~~~r~i 281 (563)
++||+||.|++... .+++++++++.++++ +++++.. +.|++.+. ... . .+.|++
T Consensus 68 ~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~~--tNp~~~~~~~~~~~~~~~~~rvi 144 (309)
T 1hyh_A 68 ADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVI--SNPVDVITALFQHVTGFPAHKVI 144 (309)
T ss_dssp TTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEEC--SSSHHHHHHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEE--cCcHHHHHHHHHHhcCCCHHHEe
Confidence 99999999998643 246788888988875 5554332 23443332 221 2 356777
Q ss_pred ec
Q 008509 282 GA 283 (563)
Q Consensus 282 g~ 283 (563)
|+
T Consensus 145 g~ 146 (309)
T 1hyh_A 145 GT 146 (309)
T ss_dssp EC
T ss_pred ec
Confidence 76
No 171
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.91 E-value=2.3e-09 Score=108.10 Aligned_cols=101 Identities=20% Similarity=0.271 Sum_probs=76.0
Q ss_pred ccceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 145 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
++.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.. .. ....++..++|++
T Consensus 19 ~~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~----~~---------~~~~~i~~t~d~~ 85 (330)
T 3ldh_A 19 RSYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGS----LF---------LHTAKIVSGKDYS 85 (330)
T ss_dssp CCCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHG----GG---------SCCSEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhh----hc---------ccCCeEEEcCCHH
Confidence 356899999999999999999999998 99999999987665433232221 00 0123567788999
Q ss_pred cccCCCEEEEec--------------CCChHHHHHHHHHHHhhCCCCeEEE
Q 008509 223 EFKDVDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILA 259 (563)
Q Consensus 223 ~l~~aDlVieav--------------~e~~~~k~~v~~~l~~~~~~~~ii~ 259 (563)
++++||+||.+. .+|..+++++.+++.+++ |++++.
T Consensus 86 ~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~il 135 (330)
T 3ldh_A 86 VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKE 135 (330)
T ss_dssp SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEE
Confidence 999999999763 456678888999999995 555443
No 172
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.90 E-value=5.1e-09 Score=105.79 Aligned_cols=124 Identities=19% Similarity=0.234 Sum_probs=81.5
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... ... ...++..++|++++
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~-~~~-----------~~~~v~~t~d~~a~ 73 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSP-VDG-----------FDAKFTGANDYAAI 73 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHH-HHT-----------CCCCEEEESSGGGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhh-hcC-----------CCCEEEEeCCHHHH
Confidence 45799999999999999999999999 999999999876543222222110 000 11356777889999
Q ss_pred cCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhh----hccC-CCceeecc
Q 008509 225 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE----KTSS-QDRIIGAH 284 (563)
Q Consensus 225 ~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~----~~~~-~~r~ig~h 284 (563)
++||+||.++.- +..+.+++...+.+++ |++++...| .|++.+.. .... +.|++|+.
T Consensus 74 ~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvt--NPvd~~t~~~~k~sg~p~~rviG~~ 149 (324)
T 3gvi_A 74 EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICIT--NPLDAMVWALQKFSGLPAHKVVGMA 149 (324)
T ss_dssp TTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecC--CCcHHHHHHHHHhcCCCHHHEEeec
Confidence 999999998631 2345566667788887 556544322 24433322 2232 35666653
No 173
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=98.88 E-value=1.3e-09 Score=109.59 Aligned_cols=96 Identities=14% Similarity=0.029 Sum_probs=83.6
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++. + |
T Consensus 204 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~-p----------------------------------- 246 (305)
T 3m6n_A 204 IMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-T-P----------------------------------- 246 (305)
T ss_dssp HHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-C-H-----------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-C-h-----------------------------------
Confidence 57899999999999999999999999999999999999875 2 2
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhcc
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 133 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k 133 (563)
.++..+|++++.+...+++++++.|...|..++.|+|....+..++...+.++
T Consensus 247 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q~~~ 299 (305)
T 3m6n_A 247 HAWAAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRR 299 (305)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHhhc
Confidence 58889999999999999999999999999999999998877666666555444
No 174
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=98.88 E-value=6.6e-10 Score=115.89 Aligned_cols=91 Identities=14% Similarity=-0.028 Sum_probs=73.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++|+|+||+++||||+|||+++|.+.+.+++.+++.
T Consensus 347 llLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la~--------------------------------------- 387 (440)
T 2np9_A 347 VILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG--------------------------------------- 387 (440)
T ss_dssp HHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTCS---------------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhCH---------------------------------------
Confidence 57899999999999999999999999999999999887632
Q ss_pred hhHHHHHHHHHHhhccCch---hhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGY---SGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 131 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~---~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~ 131 (563)
.|+..+|++++.+.. +.+ +.+..|...+..++.|+|+++++.+|++||++
T Consensus 388 ~Av~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR~a 440 (440)
T 2np9_A 388 DAVLANRRMLNLADE-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRPPA 440 (440)
T ss_dssp HHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC-----
T ss_pred HHHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCCCC
Confidence 467788998887754 433 45667778899999999999999999999863
No 175
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=98.88 E-value=1.4e-09 Score=106.96 Aligned_cols=83 Identities=8% Similarity=0.097 Sum_probs=71.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.+++++++..+ +
T Consensus 181 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 224 (263)
T 2j5g_A 181 FLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQP------------------------------------T 224 (263)
T ss_dssp HHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 5789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 130 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~ 130 (563)
.|...+|++++.....+++++++.|. ..+++++|++||.
T Consensus 225 ~a~~~~K~~l~~~~~~~l~~~l~~e~-----------~~eg~~af~~~~~ 263 (263)
T 2j5g_A 225 LNLRYTRVALTQRLKRLVNEGIGYGL-----------ALEGITATDLRNT 263 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhhhhccHHHHHHHHH-----------HHhhHHHHHhccC
Confidence 58888999999887777777777664 4599999999873
No 176
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.88 E-value=2.1e-09 Score=110.11 Aligned_cols=117 Identities=15% Similarity=0.031 Sum_probs=84.3
Q ss_pred eeEEEEcCCcchHHHHHHHH-hCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIGGGLMGSGIATAHI-LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
++|+|||+|.||..+|..+. ..|++|++||++++..+... +.| +..++++ +.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-----------ALG-------------AERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-----------HHT-------------CEECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-----------hcC-------------cEEeCCHHHHhc
Confidence 58999999999999999999 99999999999876543321 111 2233355 4578
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccCC-CceeecccCCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFSP 288 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~~-~r~ig~hf~~P 288 (563)
+||+|+.++|.+.+.+.-+.+++.+.++++++|++.+++ .....+.+.+... -...|+|+|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999998776655555666789999988644433 3445677776542 22367899884
No 177
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.87 E-value=1e-08 Score=103.97 Aligned_cols=173 Identities=14% Similarity=0.084 Sum_probs=109.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCC-CCH-HHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQ-DKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~-~~~-~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.||+.+|..|+++|++|++|++++. +... +.|. +.. ...+..+..+..+++.+.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~-----------~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~ 69 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVK-----------AKGIRIRSATLGDYTFRPAAVVRSAAELE 69 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHH-----------HHCEEEEETTTCCEEECCSCEESCGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHH-----------hCCcEEeecCCCcEEEeeeeeECCHHHcC
Confidence 6899999999999999999999999999999862 2211 1111 000 00000001233456666554
Q ss_pred -CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC-HHHHhhhccCCCceeec-ccC-----CCCC---CCC-
Q 008509 226 -DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-LNIVGEKTSSQDRIIGA-HFF-----SPAH---VMP- 293 (563)
Q Consensus 226 -~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~-i~~la~~~~~~~r~ig~-hf~-----~P~~---~~~- 293 (563)
++|+||.|||.... .++++++.+.++++++|++.+.++. .+.+++.++.. ++++. -++ .|-. ..+
T Consensus 70 ~~~DlVilavK~~~~--~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~~ 146 (320)
T 3i83_A 70 TKPDCTLLCIKVVEG--ADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQAYG 146 (320)
T ss_dssp SCCSEEEECCCCCTT--CCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred CCCCEEEEecCCCCh--HHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECCCC
Confidence 99999999997652 3678899999999998888888886 45666666433 44432 221 1211 111
Q ss_pred eEEEEeCCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHH
Q 008509 294 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 336 (563)
Q Consensus 294 lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl 336 (563)
-+.+-.....+.+..+.+.+++...|.......|.-+.....+
T Consensus 147 ~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl 189 (320)
T 3i83_A 147 RLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKC 189 (320)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHH
Confidence 1222222334456778888899988888777776555444433
No 178
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.87 E-value=1.5e-09 Score=110.49 Aligned_cols=117 Identities=13% Similarity=0.055 Sum_probs=83.2
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|..+...|++|++||++++..+... +.| +..+ ++ +.+++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EFQ-------------AEFV-STPELAAQ 210 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hcC-------------ceeC-CHHHHHhh
Confidence 5899999999999999999999999999999876433311 111 2223 45 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCCCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFSPA 289 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~P~ 289 (563)
||+||.++|.+.+.+.-+.+++.+.++++++|++.+++ .....+.+.+.. .-...|+|+|+|.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 99999999987665544445666788999988644333 334567766642 3345788998764
No 179
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.87 E-value=5.5e-09 Score=105.56 Aligned_cols=124 Identities=18% Similarity=0.326 Sum_probs=81.5
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... ......++..+++++++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~------------~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP------------IEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh------------hcCCCcEEEEcCCHHHH
Confidence 45799999999999999999999998 999999999876532211111100 00011246667889999
Q ss_pred cCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhh----hccC-CCceeecc
Q 008509 225 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE----KTSS-QDRIIGAH 284 (563)
Q Consensus 225 ~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~----~~~~-~~r~ig~h 284 (563)
++||+||.+..- +..+.+++...+.+++ |++++... +.|++.+.. .... |.|++|+.
T Consensus 72 ~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv--tNPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 72 ENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICI--TNPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC--CSSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred CCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEe--cCchHHHHHHHHHhcCCCHHHEEeec
Confidence 999999998632 3355667777888888 55554433 234443332 2233 35677753
No 180
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.86 E-value=1.6e-08 Score=102.02 Aligned_cols=121 Identities=19% Similarity=0.204 Sum_probs=78.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.||.++|..|+.+ |++|+++|+++++++.....+.+.. . ......++..++|+++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~----~--------~~~~~~~i~~t~d~~~l~ 68 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESG----P--------VGLFDTKVTGSNDYADTA 68 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTH----H--------HHTCCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhh----h--------cccCCcEEEECCCHHHHC
Confidence 4899999999999999999985 7999999999987764221111100 0 000123467778888899
Q ss_pred CCCEEEEecCCC--------------hHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhc----c-CCCceeec
Q 008509 226 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 283 (563)
Q Consensus 226 ~aDlVieav~e~--------------~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~----~-~~~r~ig~ 283 (563)
+||+||++++.. ..+.+++.+.+.++++ +++++.. +.|+..+...+ . .|.|++|+
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~-~~~viv~--tNP~~~~~~~~~~~~~~~~~rviG~ 142 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSK-NPIIIVV--SNPLDIMTHVAWVRSGLPKERVIGM 142 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCS-SCEEEEC--CSSHHHHHHHHHHHHCSCGGGEEEE
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEE--cCchHHHHHHHHHhcCCChHHEEEC
Confidence 999999999632 1445677778888864 4443332 33555443322 1 24566665
No 181
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.35 E-value=3.2e-10 Score=107.05 Aligned_cols=149 Identities=14% Similarity=0.162 Sum_probs=97.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
-++|+|||+|.||..+|..|.+.|++|++||++++ .+.. ...| +..++..+.+++
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~-----------~~~g-------------~~~~~~~~~~~~ 73 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSL-----------LPRG-------------AEVLCYSEAASR 73 (201)
Confidence 35799999999999999999999999999999876 3221 0111 112222256789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--------HHHhhhccCCCceeecccCCCCCCCC-eE--
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIVGEKTSSQDRIIGAHFFSPAHVMP-LL-- 295 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--------~~la~~~~~~~r~ig~hf~~P~~~~~-lv-- 295 (563)
||+||.|+|.+ .+ ..++ ++.. ..++++|++.+++++. ..+.+.+.. .+++..-...|..... ..
T Consensus 74 aDvVilav~~~-~~-~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~ 148 (201)
T 2yjz_A 74 SDVIVLAVHRE-HY-DFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLD 148 (201)
Confidence 99999999975 33 3444 4543 3467888877777763 344444332 3454443333443221 11
Q ss_pred ----EEEeCCCCCHHHHHHHHHHHHHhCCceEEecC
Q 008509 296 ----EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 327 (563)
Q Consensus 296 ----Eiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~d 327 (563)
.++.+ .+++..+.+.++++.+|+.++.+++
T Consensus 149 g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 149 ASRQVFVCG--NDSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 23333 2577889999999999999998864
No 182
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.83 E-value=1.2e-09 Score=110.90 Aligned_cols=111 Identities=14% Similarity=0.036 Sum_probs=81.2
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|..+...|++|++||++++..+ | .....++ +.+++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 5799999999999999999999999999999875310 1 1223455 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~--i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|.+.+.+.-+-+++.+.++++++|++.+++.. ...+.+.+.. ..+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 9999999998776554433455567889998865444433 3467776653 45667889987
No 183
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.82 E-value=9.6e-09 Score=103.91 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=79.7
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
+++||+|||+|.||.++|..++..|. +|+++|++++.++.....+.+. . . .+. ...++. ++++++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~---~-~--~~~------~~~~i~-~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG---K-V--FAP------KPVDIW-HGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---T-T--SSS------SCCEEE-ECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH---h-h--hcC------CCeEEE-cCcHHH
Confidence 45799999999999999999998886 8999999987544321111110 0 0 000 001233 356789
Q ss_pred ccCCCEEEEecC--------------CChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhcc----C-CCceeec
Q 008509 224 FKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS----S-QDRIIGA 283 (563)
Q Consensus 224 l~~aDlVieav~--------------e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~----~-~~r~ig~ 283 (563)
+++||+||++++ ++..+++++.+.+.++++ ++++... +.|++.+...+. . |.|++|+
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~~iv~--tNPv~~~~~~~~~~s~~p~~rviG~ 147 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGF-QGLFLVA--TNPVDILTYATWKFSGLPHERVIGS 147 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTC-CSEEEEC--SSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCC-CCEEEEe--CCchHHHHHHHHHHhCCCHHHEEec
Confidence 999999999953 445788999999999974 5533322 336665554432 2 4566665
No 184
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.81 E-value=1.9e-09 Score=109.85 Aligned_cols=116 Identities=16% Similarity=0.056 Sum_probs=82.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
-++|+|||+|.||..+|..+...|++|++||++++. +... +.| +.. .++ +.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~~~l~ 203 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-----------ELN-------------AEF-KPLEDLLR 203 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HHC-------------CEE-CCHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-----------hcC-------------ccc-CCHHHHHh
Confidence 368999999999999999999999999999999875 3211 112 122 244 4578
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhhhccC-CCceeecccCCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFSP 288 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~--~la~~~~~-~~r~ig~hf~~P 288 (563)
+||+|+.++|.+.+.+.-+.+++.+.++++++|++.+.+..++ .+.+.+.. +-...|+|+|+|
T Consensus 204 ~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ 269 (334)
T 2dbq_A 204 ESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEE 269 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSS
T ss_pred hCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCC
Confidence 9999999999987665444456677889999886544333333 56666642 334467999883
No 185
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.79 E-value=5.6e-09 Score=109.49 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=78.0
Q ss_pred ceeEEEEcCCcchHHHHHHHHh-CCCeEEEEe---CCHHHHHHHHHHHHHHHHHHHHcCCC--C----HHHHHhhhcCee
Q 008509 147 VRKVAVIGGGLMGSGIATAHIL-NNIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRGKL--T----QDKANNALKMLK 216 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~-~G~~V~l~d---~~~~~~~~~~~~i~~~~~~~~~~g~~--~----~~~~~~~~~~i~ 216 (563)
++||+|||+|.||..+|..|+. +|++|++|| ++++.++... +.+.+ . ..+......++.
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~ 70 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKAL-----------GADELTVIVNEKDGTQTEVKSRPK 70 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHH-----------TTSCEEEEEECSSSCEEEEEECCS
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHH-----------hhccceeeeecCCCccceeeccce
Confidence 3689999999999999999998 599999999 8777665432 11110 0 000000112333
Q ss_pred -eecCc-ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH
Q 008509 217 -GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 268 (563)
Q Consensus 217 -~~~~~-~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~ 268 (563)
.++++ +++.+||+||+|||... ..++++++.++++++++|++++++..++
T Consensus 71 ~~~~~~~~a~~~aD~Vilav~~~~--~~~v~~~l~~~l~~~~ivv~~~~~~G~~ 122 (404)
T 3c7a_A 71 VITKDPEIAISGADVVILTVPAFA--HEGYFQAMAPYVQDSALIVGLPSQAGFE 122 (404)
T ss_dssp EEESCHHHHHTTCSEEEECSCGGG--HHHHHHHHTTTCCTTCEEEETTCCTTHH
T ss_pred EEeCCHHHHhCCCCEEEEeCchHH--HHHHHHHHHhhCCCCcEEEEcCCCccHH
Confidence 55666 45789999999999875 5789999999999999999976666544
No 186
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.79 E-value=3e-08 Score=100.39 Aligned_cols=105 Identities=26% Similarity=0.348 Sum_probs=73.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
++||+|||+|.||..+|..|+.+|+ +|+++|++++.++...-.+.+.+ . +.. ..++..+++++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~----~---~~~------~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS----S---FYP------TVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG----G---GST------TCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh----h---hcC------CeEEEeCCCHHHh
Confidence 4689999999999999999999999 99999999877652111111110 0 000 1234555577889
Q ss_pred cCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCC
Q 008509 225 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTI 265 (563)
Q Consensus 225 ~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l 265 (563)
++||+||.++.. +..++++++.++.++ .++++|++.+-++
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~ 127 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPV 127 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCch
Confidence 999999999932 235667888888886 5777776544443
No 187
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.77 E-value=4.3e-09 Score=107.18 Aligned_cols=112 Identities=20% Similarity=0.141 Sum_probs=79.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|..+...|++|++||++++. +.+. +.| +..+ ++ +.+++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-----------ELK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-----------HHT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-----------hcC-------------ceec-CHHHHHhh
Confidence 58999999999999999999999999999999875 2211 111 2222 45 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH---HHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i---~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|.+.+.+.-+-+++.+.++++ +++ |+|...+ ..+.+.+.. .....|+|+|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ili-n~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLV-NIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEE-ECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEE-ECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999998666554444566678888 664 5554332 245566643 34567899998
No 188
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.73 E-value=8.1e-08 Score=101.71 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=56.2
Q ss_pred eeEEEEcCCcch--HHHHHHHHhC----CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 148 RKVAVIGGGLMG--SGIATAHILN----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~mG--~~iA~~la~~----G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
+||+|||+|.|| .++|..|+.. |++|++||++++.++....... ....... ...+++.++|+
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~----~~l~~~~--------~~~~I~~ttD~ 71 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAK----KYVEEVG--------ADLKFEKTMNL 71 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHH----HHHHHTT--------CCCEEEEESCH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHH----HHhccCC--------CCcEEEEECCH
Confidence 589999999975 5557788754 8999999999998887544322 2221111 12468888898
Q ss_pred -ccccCCCEEEEecC
Q 008509 222 -SEFKDVDMVIEAVI 235 (563)
Q Consensus 222 -~~l~~aDlVieav~ 235 (563)
+++++||+||++++
T Consensus 72 ~eal~dAD~VIiaag 86 (480)
T 1obb_A 72 DDVIIDADFVINTAM 86 (480)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 78999999999995
No 189
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.71 E-value=6.3e-08 Score=96.51 Aligned_cols=110 Identities=16% Similarity=0.244 Sum_probs=72.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.||.++|..|+..|+ +|++||++++.++...-.+.+.... .+ ...++..++|+++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~---~~---------~~~~i~~t~d~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG---ID---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT---TT---------CCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhh---cC---------CCCEEEEeCCHHHhC
Confidence 489999999999999999999998 9999999998866322112111100 00 112466677889999
Q ss_pred CCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhh
Q 008509 226 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272 (563)
Q Consensus 226 ~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~ 272 (563)
+||+||.+..- |..+.+++...+.+++ |++++...| .|++.+..
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvs--NPvd~~t~ 126 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT--NPMDVMTY 126 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS--SSHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeC--CcchHHHH
Confidence 99999998732 1233345556677775 556554433 46554443
No 190
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=98.71 E-value=6.3e-09 Score=100.40 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=66.5
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.++|++++..+ +
T Consensus 159 l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 202 (232)
T 3ot6_A 159 SVINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKIN------------------------------------M 202 (232)
T ss_dssp HHTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 4789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHH
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVF 109 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f 109 (563)
.|...+|++++.+...+++++++.|.+.|
T Consensus 203 ~a~~~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 203 NAHKKTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 58899999999998889999999998765
No 191
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=98.68 E-value=9.3e-09 Score=102.17 Aligned_cols=86 Identities=6% Similarity=0.038 Sum_probs=67.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCc-----hHHHHHH-HHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHH
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSE-----ELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 74 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~-----~l~~~A~-~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (563)
|+|||++++|+||+++||||+|||++ ++++.+. +++++++..+
T Consensus 177 llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~------------------------------- 225 (280)
T 1pjh_A 177 CLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLY------------------------------- 225 (280)
T ss_dssp HHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCC-------------------------------
T ss_pred HHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCC-------------------------------
Confidence 57899999999999999999999985 7888885 9999988743
Q ss_pred hhCCCChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 75 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 75 ~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
+.|...+|++++.+.. ..++. ..++|+++++.+|.++|++...
T Consensus 226 -----~~a~~~~K~~l~~~~~----~~l~~--------~~~~d~~e~~~af~~kr~~e~~ 268 (280)
T 1pjh_A 226 -----LPSCLGMKKLLKSNHI----DAFNK--------ANSVEVNESLKYWVDGEPLKRF 268 (280)
T ss_dssp -----HHHHHHHHHHHHTTTH----HHHHH--------HHHHHHHHHHHHHHHTHHHHHH
T ss_pred -----HHHHHHHHHHHHHhHH----HHHHH--------hhhHHHHHHHHHHhCCccHHHH
Confidence 2578888888876542 22221 3588999999999999877443
No 192
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.66 E-value=7.4e-08 Score=99.00 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=73.5
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCe-eeecCcc-cc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML-KGVLDYS-EF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i-~~~~~~~-~l 224 (563)
++||+|||+|.||..+|..|+++|++|++||++++.++...+.. .+ .+.....+ ...++ ..+++++ .+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~--~~~~~~~~------~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG--AI--IAEGPGLA------GTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT--SE--EEESSSCC------EEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC--Ce--EEeccccc------cccccceecCCHHHHH
Confidence 36899999999999999999999999999999998876543210 00 00000000 00122 2455664 47
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecC
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
.++|+||.|+|.... .+++.++.+.++++++|++..
T Consensus 74 ~~~D~vi~~v~~~~~--~~~~~~l~~~l~~~~~vv~~~ 109 (359)
T 1bg6_A 74 KDADVILIVVPAIHH--ASIAANIASYISEGQLIILNP 109 (359)
T ss_dssp TTCSEEEECSCGGGH--HHHHHHHGGGCCTTCEEEESS
T ss_pred hcCCEEEEeCCchHH--HHHHHHHHHhCCCCCEEEEcC
Confidence 899999999998764 678899999999999777653
No 193
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=98.64 E-value=3.9e-08 Score=99.96 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=69.9
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||+++|++.|.++|++++..+ +
T Consensus 218 llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~------------------------------------~ 261 (333)
T 3njd_A 218 LLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMP------------------------------------V 261 (333)
T ss_dssp HHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5799999999999999999999999999999999999998853 2
Q ss_pred hhHHHHHHHHHHhhcc-CchhhHH------------HHHHHHHHHhcCHHHHHHHHHHhhhhhhccC
Q 008509 81 PQHQACLDVIEEGIVH-GGYSGVL------------KEAKVFKELVMLDTSRGLVHVFFAQRATSKV 134 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~-~~~~~l~------------~E~~~f~~l~~s~~~~~~~~aF~~kr~~~k~ 134 (563)
.|...+|++++.+... ++..+.. .|...|.+.. .++++.+|++||++...
T Consensus 262 ~al~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~f~~~~----~~~g~~a~~ekR~~~f~ 324 (333)
T 3njd_A 262 NQLIMAKLACNTALLNQGVATSQMVSTVFDGIARHTPEGHAFVATA----REHGFREAVRRRDEPMG 324 (333)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTTSHHHHHHHHHH----HHHCHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcChHHHHHHHHh----hhHHHHHHHHhcCCCCC
Confidence 5788888888887643 3332211 2333333332 35667888999987543
No 194
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=98.64 E-value=7.4e-09 Score=99.98 Aligned_cols=74 Identities=19% Similarity=0.134 Sum_probs=67.1
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.++|++++..+ +
T Consensus 159 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 202 (233)
T 3r6h_A 159 AAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLN------------------------------------Q 202 (233)
T ss_dssp HHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 4789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHH
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFK 110 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~ 110 (563)
.|...+|++++.+...+++++++.|...|.
T Consensus 203 ~a~~~~K~~l~~~~~~~l~~~l~~e~~~f~ 232 (233)
T 3r6h_A 203 QAHNATKLRARAEALKAIRAGIDGIEAEFG 232 (233)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHTSHHHHC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 588899999999988899999999988874
No 195
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.58 E-value=1.6e-07 Score=94.34 Aligned_cols=108 Identities=17% Similarity=0.231 Sum_probs=69.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... .... ..++..+.++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~~~-----------~~~v~~~~~~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSP-IHGF-----------DTRVTGTNDYGPTE 68 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHH-HHTC-----------CCEEEEESSSGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccc-ccCC-----------CcEEEECCCHHHhC
Confidence 489999999999999999999987 999999999876542222221110 0000 01344567889999
Q ss_pred CCCEEEEecCCC--------------hHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 008509 226 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270 (563)
Q Consensus 226 ~aDlVieav~e~--------------~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~l 270 (563)
+||+||.+..-. ..+.+++...+.+++ |++++...| .|++.+
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvt--NPvd~~ 124 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVA--NPLDVM 124 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECC--SSHHHH
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecC--CchhHH
Confidence 999999987422 223344455677765 555554332 354443
No 196
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.55 E-value=1.3e-07 Score=95.73 Aligned_cols=111 Identities=19% Similarity=0.243 Sum_probs=73.7
Q ss_pred ccceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 145 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
.+.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.. ... ....+..++|++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~----~~~---------~~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS----LFL---------KTPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG----GGC---------SCCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh----hcc---------CCCeEEEcCCHH
Confidence 346899999999999999999999998 99999999877655322221110 000 012355678899
Q ss_pred cccCCCEEEEecC--------------CChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHh
Q 008509 223 EFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271 (563)
Q Consensus 223 ~l~~aDlVieav~--------------e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la 271 (563)
++++||+||.+.. .|..+.+++.+.+.+++ |++++...| .|++.+.
T Consensus 84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlvvt--NPvdi~t 143 (331)
T 4aj2_A 84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLIVS--NPVDILT 143 (331)
T ss_dssp GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECS--SSHHHHH
T ss_pred HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec--ChHHHHH
Confidence 9999999998752 12234556666788885 455444322 3554443
No 197
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.54 E-value=1.5e-07 Score=98.81 Aligned_cols=72 Identities=21% Similarity=0.249 Sum_probs=55.5
Q ss_pred eeEEEEcCCcc--hHHHHHHHHh----CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 148 RKVAVIGGGLM--GSGIATAHIL----NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~m--G~~iA~~la~----~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
+||+|||+|+| |.+|+..++. .| +|++||++++.+++... +.+ .+.. ...+++.|+|+
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~-~~~---------~l~~-----~~~~I~~TtD~ 69 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEV-IGN---------HSGN-----GRWRYEAVSTL 69 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHH-HHT---------TSTT-----SCEEEEEESSH
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHH-HHH---------HHhc-----cCCeEEEECCH
Confidence 59999999997 5899999886 57 99999999998876422 111 1111 23468889998
Q ss_pred -ccccCCCEEEEecC
Q 008509 222 -SEFKDVDMVIEAVI 235 (563)
Q Consensus 222 -~~l~~aDlVieav~ 235 (563)
+++++||+||++++
T Consensus 70 ~eAl~dADfVI~air 84 (450)
T 3fef_A 70 KKALSAADIVIISIL 84 (450)
T ss_dssp HHHHTTCSEEEECCC
T ss_pred HHHhcCCCEEEeccc
Confidence 58899999999995
No 198
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.54 E-value=2.9e-07 Score=97.49 Aligned_cols=121 Identities=18% Similarity=0.164 Sum_probs=79.6
Q ss_pred eeEEEEcCCcc-hHHHHHHHHhC-----CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 148 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~m-G~~iA~~la~~-----G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
+||+|||+|.+ |.++|..|+.. +.+|++||++++.++... .+...+.. ..+ ...++..++|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~-~~~~~~l~--~~~---------~~~~I~~t~D~ 96 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA-GACDVFIR--EKA---------PDIEFAATTDP 96 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH-HHHHHHHH--HHC---------TTSEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH-HHHHHHhc--cCC---------CCCEEEEECCH
Confidence 59999999998 55688888887 679999999999877743 22222110 111 12357778898
Q ss_pred -ccccCCCEEEEecCCCh----------------------------------HHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 008509 222 -SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTSTID 266 (563)
Q Consensus 222 -~~l~~aDlVieav~e~~----------------------------------~~k~~v~~~l~~~~~~~~ii~sntS~l~ 266 (563)
+++++||+||.+++... .+.+++.+++.+++ |++++.. .|.|
T Consensus 97 ~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~--~TNP 173 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLN--YSNP 173 (472)
T ss_dssp HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE--CCSC
T ss_pred HHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE--eCCc
Confidence 78999999999997621 23456777888888 4555542 2345
Q ss_pred HHHHhhhc---cCCCceeec
Q 008509 267 LNIVGEKT---SSQDRIIGA 283 (563)
Q Consensus 267 i~~la~~~---~~~~r~ig~ 283 (563)
+..+...+ ..+.|++|+
T Consensus 174 vdi~T~~~~k~~p~~rViG~ 193 (472)
T 1u8x_X 174 AAIVAEATRRLRPNSKILNI 193 (472)
T ss_dssp HHHHHHHHHHHSTTCCEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEe
Confidence 55444333 223366665
No 199
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.51 E-value=6.8e-08 Score=95.96 Aligned_cols=124 Identities=10% Similarity=-0.003 Sum_probs=85.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++..+ .....+++ +.+++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----------------------------~~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-----------------------------VDVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTT-----------------------------CSEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEeccccccc-----------------------------cccccCChHHHhhc
Confidence 6899999999999999999999999999999865311 02233455 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhcc-CCCceeecccCC-----CCCCCCeEEEE
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFS-----PAHVMPLLEIV 298 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~-~~~r~ig~hf~~-----P~~~~~lvEiv 298 (563)
||+|+.++|-..+.+.-+-++..+.++++++|++.+++ ..-..+.+.+. ..-...++-.|. |-...+-+-+.
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~~pL~~~~nvilT 253 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPEITETNLRNAILS 253 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTSCCSCCCSSEEEC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcccchhhhhhhhcC
Confidence 99999999976665544446677889999988754444 33446666654 333455555554 33334445555
Q ss_pred eC
Q 008509 299 RT 300 (563)
Q Consensus 299 ~~ 300 (563)
|+
T Consensus 254 PH 255 (290)
T 3gvx_A 254 PH 255 (290)
T ss_dssp CS
T ss_pred cc
Confidence 55
No 200
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=98.50 E-value=4.6e-08 Score=95.77 Aligned_cols=83 Identities=12% Similarity=0.119 Sum_probs=68.4
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|++||++++|+||+++||||+|||++++.+.|.+++++++..+ +
T Consensus 172 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 215 (257)
T 1szo_A 172 FLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKP------------------------------------L 215 (257)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCC------------------------------------H
Confidence 4789999999999999999999999999999999999998743 3
Q ss_pred hhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHHHHHHHHHhhhhh
Q 008509 81 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 130 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~~~~~~aF~~kr~ 130 (563)
.+...+|++++.....+++++++.|... +++.+|-.+.+
T Consensus 216 ~a~~~~K~~l~~~~~~~l~~~l~~~~~~-----------eg~~a~~~~~~ 254 (257)
T 1szo_A 216 LARRYARKVLTRQLRRVMEADLSLGLAH-----------EALAAIDLGME 254 (257)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHH-----------HHHHHHHHC--
T ss_pred HHHHHHHHHHHhhhhccHHHHHHHHHHH-----------hhhhhhhcccc
Confidence 5788899999888777777777776543 66788876543
No 201
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.50 E-value=2.8e-08 Score=102.39 Aligned_cols=109 Identities=22% Similarity=0.152 Sum_probs=77.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC--------eEEEEeCCHHHHHH-HHHHHHHHHHHHHHcC-CCCHHHHHhhhcCeee
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI--------YVVLKEVNSEYLLK-GIKTIEANVRGLVTRG-KLTQDKANNALKMLKG 217 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~--------~V~l~d~~~~~~~~-~~~~i~~~~~~~~~~g-~~~~~~~~~~~~~i~~ 217 (563)
.||+|||+|.||++||..|+++|+ +|++|.++++...+ ..+.++ +..+.. .+.. -....++..
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in----~~~~N~~YLpg---v~Lp~~i~~ 107 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIIN----TRHQNVKYLPG---ITLPDNLVA 107 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHT----TTCCBTTTBTT---CCCCSSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHH----hcCcCcccCCC---CcCCCCcEE
Confidence 489999999999999999999875 59999998653111 001111 000000 0111 012356888
Q ss_pred ecCc-ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC
Q 008509 218 VLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 265 (563)
Q Consensus 218 ~~~~-~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l 265 (563)
++|+ +++++||+||.+||.. ..+.+++++.+++++++++++.+-++
T Consensus 108 t~dl~~al~~ad~ii~avPs~--~~r~~l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 108 NPDLIDSVKDVDIIVFNIPHQ--FLPRICSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp ESCHHHHHTTCSEEEECSCGG--GHHHHHHHHTTTSCTTCEEEECCCSC
T ss_pred eCCHHHHHhcCCEEEEECChh--hhHHHHHHhccccCCCceeEEecccc
Confidence 9998 5789999999999975 46889999999999999888877665
No 202
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.49 E-value=4.3e-07 Score=91.77 Aligned_cols=110 Identities=26% Similarity=0.299 Sum_probs=71.9
Q ss_pred cceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhh-cCee-eecCc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL-KMLK-GVLDY 221 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~-~~i~-~~~~~ 221 (563)
..+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+.+.. . .+ ..+. .+.++
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~----~-----------~~~~~v~i~~~~~ 68 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGK----A-----------FAPQPVKTSYGTY 68 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTG----G-----------GSSSCCEEEEECG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcc----c-----------cccCCeEEEeCcH
Confidence 45799999999999999999999998 99999999887665322222210 0 00 1122 35578
Q ss_pred ccccCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh
Q 008509 222 SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 273 (563)
Q Consensus 222 ~~l~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~ 273 (563)
+++++||+||.++.. +..+.+++...+.++++ ++++...| .|++.+...
T Consensus 69 ~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlvvt--NPvd~~t~~ 131 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLVAT--NPVDILTYA 131 (326)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECS--SSHHHHHHH
T ss_pred HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcC--ChHHHHHHH
Confidence 999999999998742 11233455566777765 55554332 355544433
No 203
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.49 E-value=1.1e-07 Score=96.63 Aligned_cols=111 Identities=16% Similarity=0.108 Sum_probs=67.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.. .+ .....++ +.+++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~-------------~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VD-------------WIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SC-------------CEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cC-------------ceecCCHHHHHhc
Confidence 689999999999999999999999999999986530 01 1223445 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|...+.+.-+-++..+.++++++|++.+.+-.+ ..+.+++.. .-...++-.|.
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~ 286 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFV 286 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCS
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcC
Confidence 99999999987776655557777889999988755444333 345555542 23345565554
No 204
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.44 E-value=2.4e-07 Score=100.14 Aligned_cols=148 Identities=12% Similarity=0.103 Sum_probs=94.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||.++|..+...|++|++||++.+. +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g-------------~~~~-~l~e~~~~ 196 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAA-----------QLG-------------IELL-SLDDLLAR 196 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHH-----------HHT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHH-----------hcC-------------cEEc-CHHHHHhc
Confidence 68999999999999999999999999999998642 2111 112 1122 44 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH--HHhhhccCC------CceeecccCC--CCCCCCeEE
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSSQ------DRIIGAHFFS--PAHVMPLLE 296 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~--~la~~~~~~------~r~ig~hf~~--P~~~~~lvE 296 (563)
||+|+.|+|...+.+.-+-+++.+.+++++++++.+.+-.+. .+.+.+... -.|++.||.. |-...+-+-
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vi 276 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVV 276 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEE
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEE
Confidence 999999999775544333234667789999987665554444 355555321 1244444421 222335566
Q ss_pred EEeCCC-CCHHHHHH-----HHHHHHHhCCc
Q 008509 297 IVRTER-TSAQVILD-----LMTVGKIIKKV 321 (563)
Q Consensus 297 iv~~~~-t~~~~~~~-----~~~l~~~lGk~ 321 (563)
+.|+.. ++++..+. +.++...++..
T Consensus 277 lTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 277 VTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp ECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 777766 66776664 55555555543
No 205
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.44 E-value=5.2e-07 Score=91.20 Aligned_cols=114 Identities=11% Similarity=0.049 Sum_probs=77.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeC-CHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV-NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~-~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
++|+|||.|.||..+|..+...|++|+.||+ +++.. .+. +.| +....++ +.++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~-----------~~g-------------~~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEA-----------SYQ-------------ATFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHH-----------HHT-------------CEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhh-----------hcC-------------cEEcCCHHHHHh
Confidence 6899999999999999999999999999999 87642 111 112 1223344 4678
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFF 286 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~ 286 (563)
+||+|+.++|...+.+.-+-++..+.++++++|++.+++ +....+.+.+.. .-.-.|+.+|
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~ 265 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVF 265 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCC
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCC
Confidence 999999999976654332324566778999988765555 344466666542 2222345555
No 206
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.41 E-value=1.6e-06 Score=87.23 Aligned_cols=116 Identities=18% Similarity=0.079 Sum_probs=74.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
+||+|||+|.||+.+|..|+ +|++|++|+++++.++... +.|......-......+. .+.+.+.++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~-----------~~G~~~~~~~~~~~~~~~--~~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQ-----------SEGIRLYKGGEEFRADCS--ADTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHH-----------HHCEEEEETTEEEEECCE--EESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHH-----------hCCceEecCCCeeccccc--ccccccCCC
Confidence 68999999999999999999 9999999999988766532 112100000000000111 112456789
Q ss_pred CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH-HHhhhccCCCceee
Q 008509 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIG 282 (563)
Q Consensus 228 DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~-~la~~~~~~~r~ig 282 (563)
|+||.||+... -.+++.++.+. .+++ |+|...++... .+.+.++. .++++
T Consensus 69 D~vilavK~~~--~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~~-~~vl~ 119 (307)
T 3ego_A 69 DLLVVTVKQHQ--LQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHVG-HSIYV 119 (307)
T ss_dssp SEEEECCCGGG--HHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCCS-CEEEE
T ss_pred CEEEEEeCHHH--HHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCCC-CcEEE
Confidence 99999998643 44667777654 6777 77888888876 44444432 34443
No 207
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.40 E-value=4.1e-07 Score=92.53 Aligned_cols=114 Identities=17% Similarity=0.097 Sum_probs=78.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||+++...+.. .| .....++ +.+++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~g-------------~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------EG-------------AIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------TT-------------CEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------cC-------------CeEeCCHHHHHhh
Confidence 689999999999999999999999999999986432210 01 2233455 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++.. .-...++-.|.
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~ 291 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFA 291 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCT
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCC
Confidence 99999999987766544446667789999988654433 344466666542 22333444443
No 208
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.39 E-value=1.2e-07 Score=94.74 Aligned_cols=162 Identities=12% Similarity=0.027 Sum_probs=100.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc-cC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-KD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l-~~ 226 (563)
+||+|||+|.||+.+|..|+++|++|++|+++++.++. ....|.. ...+. .+..+.+ .+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~-----------~~~~g~~--------~~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITY-----------YTVPHAP--------AQDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEE-----------ESSTTSC--------CEEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEE-----------EecCCee--------cccee-cCchHhcCCC
Confidence 68999999999999999999999999999999654321 0011110 01121 2223444 88
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecc------cCCCCCCC-CeEEEEe
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAH------FFSPAHVM-PLLEIVR 299 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~h------f~~P~~~~-~lvEiv~ 299 (563)
+|+||.||+.. .-.++++++.+.++++++|++...++...+. ++ ..++++.- ...|-..- ..-.+..
T Consensus 63 ~D~vilavk~~--~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~-~~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVKTH--QLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IP-FKNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSCGG--GHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CC-CSCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCCcc--CHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CC-CCcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 99999999865 3457888899999999999888888776554 32 23443321 11121100 0001111
Q ss_pred CCCCCHHHHHHHHHHHHHhCCceEEecCcchhhhHHHHH
Q 008509 300 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 338 (563)
Q Consensus 300 ~~~t~~~~~~~~~~l~~~lGk~~v~~~d~~Gfi~nRl~~ 338 (563)
+ +.+..+.+.+++...|.......|.-+.....++.
T Consensus 137 ~---~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~ 172 (294)
T 3g17_A 137 Q---DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLV 172 (294)
T ss_dssp E---CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHH
T ss_pred C---ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHH
Confidence 1 34566777777777777766667765554444433
No 209
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.37 E-value=2e-06 Score=85.34 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=66.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.+|+.+|..|+.+|. +++|+|++++.++.-.-.+.+.. .-.+ ....+..++|+++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~---~~~~---------~~~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAA---AGID---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHH---GGGT---------CCCEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccc---ccCC---------CCCeEecCCCHHHhC
Confidence 589999999999999999998875 89999999876543222222111 0000 012456678899999
Q ss_pred CCCEEEEecC--------------CChHHHHHHHHHHHhhCCCCeE
Q 008509 226 DVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCI 257 (563)
Q Consensus 226 ~aDlVieav~--------------e~~~~k~~v~~~l~~~~~~~~i 257 (563)
+||+||.+.- .|..+.+++..++.++++...+
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aiv 114 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKI 114 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEE
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEE
Confidence 9999998752 1344555666677777655443
No 210
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.37 E-value=3.8e-07 Score=92.10 Aligned_cols=80 Identities=20% Similarity=0.281 Sum_probs=62.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCC---CCCCcHhHHHHHhCHHHHHHHHH-------HHHH
Q 008509 458 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP---SYRGGIVFWADAVGANYVYTSLK-------KWSQ 527 (563)
Q Consensus 458 ~~~~i~~r~l~~~~~ea~~~l~~gv~~~~~diD~~~~~g~g~p---~~~gGp~~~~d~~G~~~~~~~~~-------~~~~ 527 (563)
.+++++||++.++++||++++++|++ ++++||.++..|+|+| + |||+++|..| +.+.+.++ .+.+
T Consensus 190 ~~Gfi~Nrll~a~~~EA~~l~~~g~~-~~~~id~a~~~g~g~~~a~~---GP~~~~dl~g-~g~~~~~~~~~~~~~~~~~ 264 (319)
T 2dpo_A 190 IDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFI---GPLETMHLNA-EGMLSYSDRYSEGMKRVLK 264 (319)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTS---CHHHHHHHTT-TSHHHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCcccc---CHHHHHHhcC-chHHHHHHHHhHHHHHHHH
Confidence 46899999999999999999999999 9999999999999987 6 9999999995 44444333 3444
Q ss_pred HhCC--CCCCCHHHHHHH
Q 008509 528 LYGN--FFKPSRFLEERA 543 (563)
Q Consensus 528 ~~~~--~~~p~~~l~~~~ 543 (563)
.+|+ .|.+ +++.+..
T Consensus 265 ~~~~~~~~~~-~~~~~~~ 281 (319)
T 2dpo_A 265 SFGSIPEFSG-ATVEKVN 281 (319)
T ss_dssp TCCCCCCCCH-HHHHHHH
T ss_pred HcCCCCCCCH-HHHHHHH
Confidence 5564 4543 4454444
No 211
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=98.36 E-value=1.2e-07 Score=94.07 Aligned_cols=72 Identities=18% Similarity=0.244 Sum_probs=59.8
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhccccCCCCChHHHHHHHHHHHHHHHhhCCCC
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 80 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (563)
|+|||++++|+||+++||||+|||++++++.|.++|++++..+ +
T Consensus 179 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~------------------------------------~ 222 (279)
T 3t3w_A 179 ILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMP------------------------------------P 222 (279)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSC------------------------------------H
T ss_pred HHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCC------------------------------------H
Confidence 5789999999999999999999999999999999999998753 3
Q ss_pred hhHHHHHHHHHHhhcc-CchhhHHHHHHH
Q 008509 81 PQHQACLDVIEEGIVH-GGYSGVLKEAKV 108 (563)
Q Consensus 81 ~A~~~~~~~i~~~~~~-~~~~~l~~E~~~ 108 (563)
.|...+|++++.+... +++++++.|...
T Consensus 223 ~a~~~~K~~l~~~~~~~~~~~~~~~~~~~ 251 (279)
T 3t3w_A 223 FALRQAKRAVNQTLDVQGFYAAIQSVFDI 251 (279)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccHHHHHHHHhhH
Confidence 5888899999887653 566666655433
No 212
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.35 E-value=4.4e-06 Score=84.32 Aligned_cols=111 Identities=20% Similarity=0.258 Sum_probs=71.7
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
.+||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+.+.. ... +. .-++.. ++++++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~--~~---------~~~v~~-~~~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYS--PT---------TVRVKA-GEYSDC 72 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGS--SS---------CCEEEE-CCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhc--CC---------CeEEEe-CCHHHh
Confidence 3689999999999999999998885 99999999887664222222110 000 00 012332 567899
Q ss_pred cCCCEEEEecCCC--h------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh
Q 008509 225 KDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 273 (563)
Q Consensus 225 ~~aDlVieav~e~--~------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~ 273 (563)
++||+||.+++-. . .+.+++...+.+++ |++++.. .|.|+..+...
T Consensus 73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv--~tNPv~~~t~~ 132 (317)
T 3d0o_A 73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLV--ATNPVDILAYA 132 (317)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEE--CSSSHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE--ecCcHHHHHHH
Confidence 9999999998432 1 34445566677775 5555544 24676655443
No 213
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.34 E-value=4.8e-07 Score=90.91 Aligned_cols=114 Identities=18% Similarity=0.095 Sum_probs=76.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++. +.+. +.| +.. .++ +.+++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-----------EVN-------------GKF-VDLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HTT-------------CEE-CCHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-----------hcC-------------ccc-cCHHHHHhh
Confidence 68999999999999999999999999999998765 2211 112 111 234 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhhhcc-CCCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~--i~~la~~~~-~~~r~ig~hf~~ 287 (563)
||+|+.++|...+.+.-+-.+..+.+++++++++.+++-. -..+.+.+. ..-.-.++.+|.
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 260 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFE 260 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCS
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCC
Confidence 9999999997765443222455667899998876555432 335565553 222334445544
No 214
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.33 E-value=5e-07 Score=91.68 Aligned_cols=114 Identities=11% Similarity=0.022 Sum_probs=77.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.. .+ .+.| +.. .++ +.+++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-----------~~~g-------------~~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VS-----------ASFG-------------VQQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HH-----------HHTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hh-----------hhcC-------------cee-CCHHHHHhc
Confidence 689999999999999999999999999999986541 11 1112 111 234 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|...+.+.-+-++..+.++++++|+..+++-.+ ..+.+.+.. .-.-.++.+|.
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~ 283 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFT 283 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCS
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecC
Confidence 99999999987765443335667789999988765554333 355665542 22223455554
No 215
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.33 E-value=8.9e-07 Score=88.68 Aligned_cols=109 Identities=10% Similarity=0.002 Sum_probs=76.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++ +. + .....++ +.+++
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~-------------~~~~~~l~ell~~ 174 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------P-------------WRFTNSLEEALRE 174 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------S-------------SCCBSCSHHHHTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------C-------------cccCCCHHHHHhh
Confidence 6899999999999999999999999999999764 10 1 0112344 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhhhcc-CCCceeecccC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFF 286 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~--i~~la~~~~-~~~r~ig~hf~ 286 (563)
||+|+.++|...+.+.-+-+++.+.++++++++..+++-. -..+.+.+. ..-.-.|+..|
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 9999999998765543333466778999998875554432 234666553 23334566666
No 216
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.33 E-value=1.9e-06 Score=90.90 Aligned_cols=121 Identities=21% Similarity=0.256 Sum_probs=78.9
Q ss_pred eeEEEEcCCcc-hHHHHHHHHhC-----CCeEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 148 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 148 ~kv~ViGaG~m-G~~iA~~la~~-----G~~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
+||+|||+|.+ |.+++..|+.+ +.+|++||+++ ++++... .+...+.. ..+ ...++..++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~-~~~~~~~~--~~~---------~~~~i~~t~ 75 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVG-ALAKRMVE--KAG---------VPIEIHLTL 75 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHH-HHHHHHHH--HTT---------CCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHH-HHHHHHHh--hcC---------CCcEEEEeC
Confidence 68999999999 78888888874 56899999999 8877643 22222211 111 112577788
Q ss_pred Cc-ccccCCCEEEEecCCCh----------------------------------HHHHHHHHHHHhhCCCCeEEEecCCC
Q 008509 220 DY-SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTST 264 (563)
Q Consensus 220 ~~-~~l~~aDlVieav~e~~----------------------------------~~k~~v~~~l~~~~~~~~ii~sntS~ 264 (563)
|+ +++++||+||.+++... .+.+++...+.++++ ++++.. .|
T Consensus 76 D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P-~a~ii~--~t 152 (450)
T 1s6y_A 76 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP-DAWLIN--FT 152 (450)
T ss_dssp CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEE--CS
T ss_pred CHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCC-CeEEEE--eC
Confidence 87 78999999999998421 235567778888884 555542 23
Q ss_pred CCHHHHhhhcc--CCC-ceeec
Q 008509 265 IDLNIVGEKTS--SQD-RIIGA 283 (563)
Q Consensus 265 l~i~~la~~~~--~~~-r~ig~ 283 (563)
.|+.-+...+. .|. |++|+
T Consensus 153 NPvdivT~a~~k~~p~~rViG~ 174 (450)
T 1s6y_A 153 NPAGMVTEAVLRYTKQEKVVGL 174 (450)
T ss_dssp SSHHHHHHHHHHHCCCCCEEEC
T ss_pred CcHHHHHHHHHHhCCCCCEEEe
Confidence 45554444431 133 66664
No 217
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.31 E-value=8.2e-07 Score=90.21 Aligned_cols=95 Identities=15% Similarity=0.213 Sum_probs=68.7
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-c
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 222 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 222 (563)
.+||+|||+ |.+|+.+|..++..|. +|+++|+++++++.....+.+. .+. ..++..++++ +
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~--------~~~-------~~~i~~t~d~~~ 72 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC--------GFE-------GLNLTFTSDIKE 72 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH--------CCT-------TCCCEEESCHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC--------cCC-------CCceEEcCCHHH
Confidence 479999998 9999999999999985 8999999988765432222211 110 1256667776 6
Q ss_pred cccCCCEEEEecC--------------CChHHHHHHHHHHHhhCCCCe
Q 008509 223 EFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHC 256 (563)
Q Consensus 223 ~l~~aDlVieav~--------------e~~~~k~~v~~~l~~~~~~~~ 256 (563)
++++||+||.++. .+..+.+++...+.+++++..
T Consensus 73 al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 73 ALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 7999999998852 234556667778888886554
No 218
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.31 E-value=9.1e-07 Score=90.34 Aligned_cols=115 Identities=10% Similarity=0.106 Sum_probs=78.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++... +.+ .+.| +....++ +.+++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g-------------~~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERA-----------RADG-------------FAVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHH-----------HHTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHH-----------HhcC-------------ceEeCCHHHHHhh
Confidence 68999999999999999999999999999998532 111 1122 2334455 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhcc-CCCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~-~~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++. ..-...++-.|.
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~ 279 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFE 279 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCS
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccC
Confidence 99999999977766554555677789999988654433 23345666554 223334555443
No 219
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.31 E-value=1.1e-06 Score=89.76 Aligned_cols=104 Identities=12% Similarity=0.090 Sum_probs=74.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||+++...+.+. +.| +....++ +.+++
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g-------------~~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-----------ETG-------------AKFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-----------HHC-------------CEECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-----------hCC-------------CeEcCCHHHHHhc
Confidence 5899999999999999999999999999999864332211 111 2333455 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhcc
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 275 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~ 275 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++.
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 99999999977665544446677789999988654433 33445666664
No 220
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.30 E-value=1.2e-06 Score=88.42 Aligned_cols=114 Identities=10% Similarity=0.086 Sum_probs=80.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++..+. + .......++ +.+++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------~---------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADH-----------------F---------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-----------------C---------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHh-----------------H---------hhccccCCHHHHHhh
Confidence 68999999999999999999999999999998653211 0 011122344 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++.. .-...++-.|.
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~ 255 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTE 255 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCS
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCC
Confidence 99999999987776655556677789999988654433 344566666643 33345555554
No 221
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.30 E-value=1.7e-06 Score=87.24 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=70.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCee-eecCccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYSE 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~~~~~ 223 (563)
.+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.. ..+..+. .+.++++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~---------------~~~~~~~i~~~~~~a 73 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL---------------PFTSPKKIYSAEYSD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG---------------GGSCCCEEEECCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh---------------hhcCCcEEEECcHHH
Confidence 4789999999999999999999988 99999999887664322221110 0111223 3456899
Q ss_pred ccCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhh
Q 008509 224 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272 (563)
Q Consensus 224 l~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~ 272 (563)
+++||+||.+..- +..+.+++...+.++++ ++++...| .|++.+..
T Consensus 74 ~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvt--NPvdi~t~ 133 (326)
T 3vku_A 74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAA--NPVDILTY 133 (326)
T ss_dssp GTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECS--SSHHHHHH
T ss_pred hcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEcc--CchHHHHH
Confidence 9999999988631 22334455667777765 55554332 45554443
No 222
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.27 E-value=7.4e-07 Score=89.75 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=76.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++... + .+.| +.. .++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~-----------~~~g-------------~~~-~~l~ell~~ 196 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-A-----------EKIN-------------AKA-VSLEELLKN 196 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-H-----------HHTT-------------CEE-CCHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-H-----------HhcC-------------cee-cCHHHHHhh
Confidence 6899999999999999999999999999999876531 1 1122 111 244 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC--CHHHHhhhccCC-CceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSSQ-DRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l--~i~~la~~~~~~-~r~ig~hf~~ 287 (563)
||+|+.++|...+.+.-+-++..+.+++++++++.+++- .-..+.+.+... -.-.++.+|.
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 260 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFW 260 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCS
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCC
Confidence 999999999766543222244556789999887655543 333566666432 2223455654
No 223
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.24 E-value=1.8e-06 Score=89.52 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=70.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||+++... .+ ......++ +.+++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----------------~~------------~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----------------YG------------NVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----------------BT------------TBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----------------cc------------CcEecCCHHHHHhh
Confidence 689999999999999999999999999999874310 00 12223455 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhcc
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 275 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~ 275 (563)
||+|+.++|...+.+.-+-++..+.++++++|+..+.+ .....+.+++.
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 99999999987766544445667789999988754444 34456777664
No 224
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.22 E-value=1.4e-05 Score=70.25 Aligned_cols=101 Identities=15% Similarity=0.099 Sum_probs=67.8
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCc---c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDY---S 222 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~---~ 222 (563)
+++|.|+|+|.+|..+|..|...|++|+++|++++.++...+ .+. ..+.+ .++. .
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-----------~~~----------~~~~gd~~~~~~l~ 64 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-----------EGF----------DAVIADPTDESFYR 64 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----------TTC----------EEEECCTTCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------CCC----------cEEECCCCCHHHHH
Confidence 568999999999999999999999999999999988765421 121 00111 0111 1
Q ss_pred --cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 008509 223 --EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270 (563)
Q Consensus 223 --~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~l 270 (563)
.+.++|+||.+++ +.+....+...+.... ...|++...+......+
T Consensus 65 ~~~~~~~d~vi~~~~-~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l 112 (141)
T 3llv_A 65 SLDLEGVSAVLITGS-DDEFNLKILKALRSVS-DVYAIVRVSSPKKKEEF 112 (141)
T ss_dssp HSCCTTCSEEEECCS-CHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHH
T ss_pred hCCcccCCEEEEecC-CHHHHHHHHHHHHHhC-CceEEEEEcChhHHHHH
Confidence 3578999999998 4444444444555554 66677766655444444
No 225
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.21 E-value=7.9e-07 Score=89.43 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=77.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++..+. + .......++ +.+++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------~---------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPG-----------------V---------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTT-----------------C---------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhh-----------------h---------hhhcccCCHHHHHhh
Confidence 68999999999999999999999999999998753211 0 001111234 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++.. .-...++-.|.
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~ 257 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFS 257 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCS
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCC
Confidence 99999999987766544446677789999988654433 344466666642 22333455554
No 226
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.21 E-value=9e-07 Score=89.23 Aligned_cols=114 Identities=12% Similarity=0.123 Sum_probs=77.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++..+. . .......++ +.+++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------~---------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAG-----------------F---------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTT-----------------C---------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhh-----------------h---------hcccccCCHHHHHhh
Confidence 68999999999999999999999999999998642110 0 011122344 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++.. .-...++-.|.
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~ 258 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFE 258 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCS
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCC
Confidence 99999999976655444444556678999988754444 334456666642 22334555553
No 227
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.21 E-value=8e-06 Score=82.37 Aligned_cols=118 Identities=23% Similarity=0.334 Sum_probs=72.5
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhc--CeeeecCcc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK--MLKGVLDYS 222 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~--~i~~~~~~~ 222 (563)
.+||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+ .... . ... ++.. ++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl--------~~~~-~------~~~~~~i~~-~~~~ 70 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDI--------NHGL-P------FMGQMSLYA-GDYS 70 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHH--------TTSC-C------CTTCEEEC---CGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH--------HHhH-H------hcCCeEEEE-CCHH
Confidence 3689999999999999999999998 9999999987655311111 1110 0 001 2332 4678
Q ss_pred cccCCCEEEEecCCCh--------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhc----c-CCCceeec
Q 008509 223 EFKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 283 (563)
Q Consensus 223 ~l~~aDlVieav~e~~--------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~----~-~~~r~ig~ 283 (563)
++++||+||.+++-.. .+.+++.+.+.+++ |++++.. .|.|+..+...+ . .+.|++|+
T Consensus 71 a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv--~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 71 DVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV--VSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp GGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE--CSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred HhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE--ecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 9999999999986432 12345667788886 5555544 255666544332 2 23466664
No 228
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.21 E-value=2.3e-06 Score=87.53 Aligned_cols=114 Identities=9% Similarity=0.064 Sum_probs=76.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++... +.+ ...| +. ..++ +.+++
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-----------~~~g-------------~~-~~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SML-----------EENG-------------VE-PASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHH-----------HHTT-------------CE-ECCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHH-----------hhcC-------------ee-eCCHHHHHhc
Confidence 68999999999999999999999999999998532 111 0112 11 2244 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccCCCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++....=..++-.|.
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~ 293 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYP 293 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCS
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCC
Confidence 99999999988776655556777889999988654433 33446666665322114555443
No 229
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.20 E-value=5.8e-07 Score=90.40 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=74.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++..+ +. ..++ +.+++
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~~ 193 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLKE 193 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHhh
Confidence 6899999999999999999999999999999865310 11 1233 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH--HHHhhhccCCCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i--~~la~~~~~~~r~ig~hf~~ 287 (563)
||+|+.++|...+.+.-+-++..+.+++++++++.+++-.+ ..+.+.+...-.-.++.+|.
T Consensus 194 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~ 256 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTD 256 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCS
T ss_pred CCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCC
Confidence 99999999987654432223455678999988755544322 34666665111223455554
No 230
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.20 E-value=1.1e-05 Score=81.43 Aligned_cols=108 Identities=20% Similarity=0.195 Sum_probs=70.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCcccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~l 224 (563)
+||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. . ....+.. ..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ----A-----------FTAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG----G-----------GSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH----H-----------hcCCeEEEECCHHHh
Confidence 689999999999999999999887 99999999987764222221110 0 1112222 3567899
Q ss_pred cCCCEEEEecCCCh--------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh
Q 008509 225 KDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 273 (563)
Q Consensus 225 ~~aDlVieav~e~~--------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~ 273 (563)
++||+||.+++-.. .+.+++...+.+++ |++++... +.|+..+...
T Consensus 71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~ 130 (318)
T 1ez4_A 71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA--ANPVDILTYA 130 (318)
T ss_dssp TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEe--CCcHHHHHHH
Confidence 99999999874321 34445566677776 55554432 4566554443
No 231
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.18 E-value=1.2e-05 Score=81.19 Aligned_cols=109 Identities=18% Similarity=0.212 Sum_probs=71.1
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 223 (563)
-+||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. .....+.. ..++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~---------------~~~~~~~i~~~~~~a 73 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL---------------PFTSPKKIYSAEYSD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG---------------GGSCCCEEEECCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH---------------HhcCCeEEEECCHHH
Confidence 3689999999999999999998887 89999999987764322121110 01112222 356789
Q ss_pred ccCCCEEEEecCCCh--------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh
Q 008509 224 FKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 273 (563)
Q Consensus 224 l~~aDlVieav~e~~--------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~ 273 (563)
+++||+||.+++-.. .+.+++...+.+++ |++++... +.|+..+...
T Consensus 74 ~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~ 134 (326)
T 2zqz_A 74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA--ANPVDILTYA 134 (326)
T ss_dssp GGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEC--SSSHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe--CCcHHHHHHH
Confidence 999999999874321 34445556677776 55544432 4566554443
No 232
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.18 E-value=3e-06 Score=86.38 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=71.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.... . ..| +....++ +.++.
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~-----------~~g-------------~~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE-R-----------ALG-------------LQRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH-H-----------HHT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhH-h-----------hcC-------------CeecCCHHHHHhc
Confidence 58999999999999999999999999999997643110 0 111 1222344 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC--CHHHHhhhcc
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 275 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l--~i~~la~~~~ 275 (563)
||+|+.++|...+.+.-+-++..+.++++++|++.+++- ....+.+.+.
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHH
Confidence 999999999776544333355667889999887655443 3345666654
No 233
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.18 E-value=1.2e-05 Score=80.82 Aligned_cols=119 Identities=18% Similarity=0.262 Sum_probs=74.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
+||+|||+|.+|.+++..++..+ .+|+++|+++++++.....+.+.. ... ..-++.. .++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~----~~~---------~~~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT----PFA---------HPVWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG----GGS---------CCCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH----hhc---------CCeEEEE-CCHHHhC
Confidence 48999999999999999999987 589999999887664222111110 000 0012333 4688999
Q ss_pred CCCEEEEecCCC--------------hHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhc----cC-CCceeec
Q 008509 226 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----SS-QDRIIGA 283 (563)
Q Consensus 226 ~aDlVieav~e~--------------~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~----~~-~~r~ig~ 283 (563)
+||+||.+++-. ..+.+++.+.+.++++ ++++... +.|+..+...+ .. +.|++|+
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv~--tNPv~~~t~~~~k~s~~p~~rviG~ 140 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAP-EAVLLVA--TNPVDVMTQVAYALSGLPPGRVVGS 140 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEC--SSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEe--cCchHHHHHHHHHHcCCCHHHEEec
Confidence 999999987432 3344556667777764 4544432 44665444332 22 3466664
No 234
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.17 E-value=1.6e-06 Score=88.00 Aligned_cols=113 Identities=19% Similarity=0.148 Sum_probs=78.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.... +.| +... ++ +.+++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g-------------~~~~-~l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CVYT-SLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcC-------------ceec-CHHHHHhh
Confidence 68999999999999999999999999999998764311 111 1112 24 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccCC-CceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~~-~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+.+ +.-..+.+++... -...++..|.
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~ 258 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFE 258 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCT
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCC
Confidence 99999999977666555556677789999988654433 3445666666422 2233444443
No 235
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.15 E-value=1.6e-06 Score=89.58 Aligned_cols=116 Identities=9% Similarity=-0.043 Sum_probs=76.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||+++...+... +.| +....++ +.+++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-----------~~G-------------~~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELN-------------LTWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHT-------------CEECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-----------hcC-------------ceecCCHHHHHhc
Confidence 5899999999999999999999999999999864322211 112 1222344 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC--HHHHhhhccCC-CceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQ-DRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~--i~~la~~~~~~-~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|++.+++-. -..+.+.+... -.-.|+..|.
T Consensus 248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~ 311 (393)
T 2nac_A 248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWF 311 (393)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCS
T ss_pred CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecC
Confidence 9999999997665533332566677899998875554432 33566666432 2223455444
No 236
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.11 E-value=3.5e-06 Score=84.83 Aligned_cols=89 Identities=11% Similarity=0.100 Sum_probs=64.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
++|+|||+|.||..++..++.. |+ +|++||+++++.++..+. .+. .+...+++ +.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~----------~~~-----------~~~~~~~~~e~v 194 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADT----------VQG-----------EVRVCSSVQEAV 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHH----------SSS-----------CCEECSSHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHH----------hhC-----------CeEEeCCHHHHH
Confidence 6899999999999999999876 87 899999999887654211 010 13445566 467
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
++||+||.|+|.. ..++.. +.++++++|.+.++
T Consensus 195 ~~aDiVi~atp~~----~~v~~~--~~l~~g~~vi~~g~ 227 (312)
T 2i99_A 195 AGADVIITVTLAT----EPILFG--EWVKPGAHINAVGA 227 (312)
T ss_dssp TTCSEEEECCCCS----SCCBCG--GGSCTTCEEEECCC
T ss_pred hcCCEEEEEeCCC----CcccCH--HHcCCCcEEEeCCC
Confidence 8999999999953 233322 56788888876533
No 237
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.11 E-value=3.5e-06 Score=87.65 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=72.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||+.+|..+...|++|+.||+++.. ..+ .+....++ +.++.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~----------------~~~------------~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKL----------------PLG------------NATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCC----------------CCT------------TCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchh----------------ccC------------CceecCCHHHHHhc
Confidence 58999999999999999999999999999997531 001 12233355 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC--CHHHHhhhcc
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 275 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l--~i~~la~~~~ 275 (563)
||+|+.++|...+.+.-+-++..+.++++++++..+++- ....+.+.+.
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 999999999887665444355667899999887544443 3345666664
No 238
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.10 E-value=3.8e-05 Score=66.84 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=61.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCc-----
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDY----- 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~----- 221 (563)
++|+|+|+|.||..++..|.+.|++|+++|++++.++.... ..+. . .+.. .++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----------~~~~-~---------~~~~d~~~~~~l~~ 64 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----------EIDA-L---------VINGDCTKIKTLED 64 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----------HCSS-E---------EEESCTTSHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----------hcCc-E---------EEEcCCCCHHHHHH
Confidence 58999999999999999999999999999999887654321 0010 0 0000 0011
Q ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecC
Q 008509 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
..+.++|+||.+++.+. .. ..+..+.+.+.++.+++..+
T Consensus 65 ~~~~~~d~vi~~~~~~~-~~-~~~~~~~~~~~~~~ii~~~~ 103 (140)
T 1lss_A 65 AGIEDADMYIAVTGKEE-VN-LMSSLLAKSYGINKTIARIS 103 (140)
T ss_dssp TTTTTCSEEEECCSCHH-HH-HHHHHHHHHTTCCCEEEECS
T ss_pred cCcccCCEEEEeeCCch-HH-HHHHHHHHHcCCCEEEEEec
Confidence 23678999999998652 22 33444555567777776543
No 239
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.09 E-value=1.1e-06 Score=89.19 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=73.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||+++...+... ..| +... ++ +.+++
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~-~l~ell~~ 200 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-----------RLG-------------LRQV-ACSELFAS 200 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-----------HHT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-----------hcC-------------ceeC-CHHHHHhh
Confidence 6899999999999999999999999999999863322211 111 1222 44 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhcc
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 275 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~ 275 (563)
||+|+.++|-..+.+.-+-++..+.++++++|++.+.+ +.-..+.+++.
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 99999999977665555556777889999988755444 33445666654
No 240
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.07 E-value=4.1e-06 Score=85.03 Aligned_cols=113 Identities=13% Similarity=0.020 Sum_probs=76.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.. .. + . +....++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~-----------~-~-------------~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LE-----------K-K-------------GYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HH-----------H-T-------------TCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HH-----------h-h-------------CeecCCHHHHHhh
Confidence 689999999999999999999999999999987642 10 0 0 1112234 45689
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|...+.+.-+-++..+.+++++++++.+++ +.-..+.+++.. .-.-.++-.|.
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~ 263 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYE 263 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCT
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCC
Confidence 99999999987765433324555678999988765544 334466666642 22334455454
No 241
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.06 E-value=3.5e-06 Score=85.55 Aligned_cols=112 Identities=17% Similarity=0.099 Sum_probs=77.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.. .+.+ .... ++ +.+++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------~~~~-------------~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--------------FEPF-------------LTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--------------GTTT-------------CEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--------------hhcc-------------cccc-CHHHHHhc
Confidence 689999999999999999999999999999986530 0001 1222 44 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhcc-CCCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~-~~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++|+..+++ +.-..+.+++. ..-...++--|.
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~ 264 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLA 264 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCT
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccc
Confidence 99999999976665544445667778999988754443 33446666654 223345555554
No 242
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.04 E-value=2.3e-06 Score=87.85 Aligned_cols=116 Identities=17% Similarity=0.084 Sum_probs=77.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCe-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
++|+|||.|.||..+|..+...|++ |+.||+++...+... +.| +....++ +.++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-----------KVG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-----------HTT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-----------hcC-------------cEecCCHHHHHh
Confidence 6899999999999999999999997 999999865433211 111 2223345 4578
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
+||+|+.++|...+.+.-+-++..+.++++++|++.+++ +.-..+.+.+.. .-.-.++--|.
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~ 285 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWF 285 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCS
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCC
Confidence 999999999987655443335566778999988755444 334456666542 22333445444
No 243
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.99 E-value=4.5e-06 Score=73.88 Aligned_cols=69 Identities=20% Similarity=0.193 Sum_probs=52.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..++..|...|++|+++|+++++.+...+. + + ..+....++ +.+.+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~----~------~-----------~~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK----Y------E-----------YEYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH----H------T-----------CEEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH----h------C-----------CceEeecCHHHHhcC
Confidence 589999999999999999999999999999999886653211 1 1 012233444 46789
Q ss_pred CCEEEEecCCC
Q 008509 227 VDMVIEAVIES 237 (563)
Q Consensus 227 aDlVieav~e~ 237 (563)
+|+||.|+|..
T Consensus 81 ~Divi~at~~~ 91 (144)
T 3oj0_A 81 NDVIITATSSK 91 (144)
T ss_dssp CSEEEECSCCS
T ss_pred CCEEEEeCCCC
Confidence 99999999865
No 244
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.98 E-value=3.4e-06 Score=86.54 Aligned_cols=111 Identities=14% Similarity=0.073 Sum_probs=76.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++.+.. ..+ . ...++ +.+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~---------------~~~-------------~-~~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAAR---------------GDE-------------G-DFRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHT---------------TCC-------------S-CBCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHh---------------ccC-------------c-ccCCHHHHHhh
Confidence 689999999999999999999999999999754321 000 1 12344 46789
Q ss_pred CCEEEEecCCChH----HHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~----~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|-..+ .+.-+-++..+.++++++|+..+.+ +.-..+.+++.. .-...++-.|.
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e 238 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWE 238 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCT
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccc
Confidence 9999999997655 4433335566778999988644333 334466666643 33455666665
No 245
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.95 E-value=4.7e-06 Score=85.63 Aligned_cols=111 Identities=11% Similarity=0.080 Sum_probs=74.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|++||++.+.. ..+ .. ..++ +.+++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g-------------~~-~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPD-------------GE-FVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STT-------------SC-CCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccC-------------cc-cCCHHHHHHh
Confidence 589999999999999999999999999999865421 011 01 1234 45689
Q ss_pred CCEEEEecCCChH----HHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccCC-CceeecccCC
Q 008509 227 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~----~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~~-~r~ig~hf~~ 287 (563)
||+|+.++|-..+ .+.-+-+++.+.++++++|+..+++ +.-..+.+.+... -.-.++-.|.
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~ 235 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWE 235 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCT
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeec
Confidence 9999999997665 4333334566778999988654433 2334566666432 2344555554
No 246
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.95 E-value=9.9e-05 Score=73.84 Aligned_cols=119 Identities=18% Similarity=0.307 Sum_probs=72.7
Q ss_pred eeEEEEc-CCcchHHHHHHHHhCCC--eEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 148 RKVAVIG-GGLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 148 ~kv~ViG-aG~mG~~iA~~la~~G~--~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
+||+|+| +|.+|..++..|+..|+ +++++|+ ++++++.....+.+.. ..+. .-++.. .+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~----~~~~---------~~~v~~-~~~~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGI----AYDS---------NTRVRQ-GGYE 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHH----TTTC---------CCEEEE-CCGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHH----hhCC---------CcEEEe-CCHH
Confidence 4899999 99999999999998886 7999999 8776543211111111 0000 012332 4578
Q ss_pred cccCCCEEEEecC--CCh------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhc----c-CCCceeec
Q 008509 223 EFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 283 (563)
Q Consensus 223 ~l~~aDlVieav~--e~~------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~----~-~~~r~ig~ 283 (563)
++++||+||.+.. ... .+.+++.+.+.+++ +++++.. +|.|+..+...+ . .+.|++|+
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv--~SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLT--TSNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEE--CCSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE--eCChHHHHHHHHHHHcCCCHHHeeec
Confidence 9999999998863 211 24455666677765 4554443 355666544432 2 23466665
No 247
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.92 E-value=1.5e-05 Score=78.69 Aligned_cols=91 Identities=14% Similarity=0.156 Sum_probs=63.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||.+++..|.+.|++|+++|+++++++... +. + .+...+++ +.+++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~-----------~~--~----------g~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLA-----------QK--F----------PLEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT-----------TT--S----------CEEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-----------HH--c----------CCeeehhHHhhhcC
Confidence 5899999999999999999999999999999988765421 10 0 12233344 56789
Q ss_pred CCEEEEecCCChHHH-HHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLK-QKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k-~~v~~~l~~~~~~~~ii~sntS 263 (563)
+|+||.|+|....-. ...+. ...+++++++.+..+
T Consensus 187 aDiVi~atp~~~~~~~~~~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 187 VQVIVNTTSVGLKDEDPEIFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSEEEECSSTTSSTTCCCSSC--GGGCCTTSEEEESSS
T ss_pred CCEEEEeCCCCCCCCCCCCCC--HHHcCCCCEEEEcCC
Confidence 999999999764210 00111 245778888877655
No 248
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.90 E-value=0.0001 Score=64.71 Aligned_cols=91 Identities=16% Similarity=0.200 Sum_probs=60.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeee-cCc-----
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDY----- 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~----- 221 (563)
.+|.|+|+|.+|..+|..|...|++|+++|++++.++.+. +.|. ..+.+. ++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-----------~~g~----------~~i~gd~~~~~~l~~ 66 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELR-----------ERGV----------RAVLGNAANEEIMQL 66 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-----------HTTC----------EEEESCTTSHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------HcCC----------CEEECCCCCHHHHHh
Confidence 5899999999999999999999999999999999877642 1221 001110 111
Q ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEe
Q 008509 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 260 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~s 260 (563)
..+.++|+||.+++.+.... .+...+....+.-.|++-
T Consensus 67 a~i~~ad~vi~~~~~~~~n~-~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 67 AHLECAKWLILTIPNGYEAG-EIVASARAKNPDIEIIAR 104 (140)
T ss_dssp TTGGGCSEEEECCSCHHHHH-HHHHHHHHHCSSSEEEEE
T ss_pred cCcccCCEEEEECCChHHHH-HHHHHHHHHCCCCeEEEE
Confidence 13578999999999765432 233334443344455553
No 249
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.86 E-value=6.2e-05 Score=63.37 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=36.0
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCC-CeEEEEeCCHHHHHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLK 185 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G-~~V~l~d~~~~~~~~ 185 (563)
.++|.|+|+|.||..++..|...| ++|+++|++++.++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~ 44 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAV 44 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHH
Confidence 478999999999999999999999 999999999987665
No 250
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.85 E-value=6e-05 Score=75.79 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=66.1
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee---ecCc
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDY 221 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 221 (563)
+||+|||+ |.+|..++..|+..| .+|+++|+++. +... .. ..... . ..++.. ++|+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a----~d----L~~~~-~-------~~~l~~~~~t~d~ 62 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVA----AD----LSHIE-T-------RATVKGYLGPEQL 62 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHH----HH----HTTSS-S-------SCEEEEEESGGGH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHH----HH----HhccC-c-------CceEEEecCCCCH
Confidence 48999998 999999999999988 69999999971 1100 00 11111 0 013444 3577
Q ss_pred c-cccCCCEEEEecC--CCh------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 008509 222 S-EFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIV 270 (563)
Q Consensus 222 ~-~l~~aDlVieav~--e~~------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~l 270 (563)
+ ++++||+||.++. ... .+.+++.+.+.++++. ++++.. |.|+..+
T Consensus 63 ~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv~--sNPv~~~ 123 (314)
T 1mld_A 63 PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPD-AMICII--SNPVNST 123 (314)
T ss_dssp HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTT-SEEEEC--SSCHHHH
T ss_pred HHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEEE--CCCcchh
Confidence 5 6999999999873 211 4556677778888744 444332 4466544
No 251
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.84 E-value=7.8e-06 Score=82.98 Aligned_cols=112 Identities=15% Similarity=0.056 Sum_probs=76.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.. .. . .+.. .++ +.+++
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-------------------~~-----~---~~~~-~~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG-------------------DH-----P---DFDY-VSLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS-------------------CC-----T---TCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh-------------------hH-----h---cccc-CCHHHHHhc
Confidence 689999999999999999999999999999986421 00 0 0111 244 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccCC-CceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~~-~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+-++..+.++++++++..+++ +.-..+.+.+... -.-.++-.|.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~ 261 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYE 261 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCT
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCC
Confidence 99999999988766543335566778999988755444 3345676666532 2233444443
No 252
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.82 E-value=9.7e-05 Score=66.02 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=34.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
++|.|+|+|.||..++..|...|++|+++|++++.++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 68999999999999999999999999999999887543
No 253
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.81 E-value=7.6e-05 Score=75.45 Aligned_cols=102 Identities=18% Similarity=0.242 Sum_probs=65.8
Q ss_pred ceeEEEEc-CCcchHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee---ecC
Q 008509 147 VRKVAVIG-GGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 220 (563)
Q Consensus 147 ~~kv~ViG-aG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 220 (563)
.+||+|+| +|.+|..++..|+..| .+|+++|++++. ..+. . + ..... ...+.. ++|
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~~----d-L----~~~~~--------~~~v~~~~~t~d 69 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVTA----D-I----SHMDT--------GAVVRGFLGQQQ 69 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHHH----H-H----HTSCS--------SCEEEEEESHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHHH----H-h----hcccc--------cceEEEEeCCCC
Confidence 46899999 7999999999999999 799999998761 1110 0 1 11100 012333 446
Q ss_pred c-ccccCCCEEEEecCCC--h------------HHHHHHHHHHHhhCCCCeEEEecCCCCCHHH
Q 008509 221 Y-SEFKDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILATNTSTIDLNI 269 (563)
Q Consensus 221 ~-~~l~~aDlVieav~e~--~------------~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~ 269 (563)
+ +++++||+||.++.-. . .+.+++.+.+.+.+ ++.++.. +|.|+..
T Consensus 70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv--~SNPv~~ 130 (326)
T 1smk_A 70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNL--ISNPVNS 130 (326)
T ss_dssp HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEE--CCSSHHH
T ss_pred HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE--ECCchHH
Confidence 5 5789999999987421 1 44556667777776 4454443 3456665
No 254
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.81 E-value=0.00015 Score=66.54 Aligned_cols=90 Identities=19% Similarity=0.237 Sum_probs=58.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeee-cC---c-
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LD---Y- 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~---~- 221 (563)
++|.|+|+|.||..+|..|... |++|+++|++++.++.+. +.|.. .+.+. ++ +
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-----------~~g~~----------~~~gd~~~~~~l~ 98 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHR-----------SEGRN----------VISGDATDPDFWE 98 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-----------HTTCC----------EEECCTTCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-----------HCCCC----------EEEcCCCCHHHHH
Confidence 5799999999999999999999 999999999998866532 12210 01000 11 1
Q ss_pred c--cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEE
Q 008509 222 S--EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 259 (563)
Q Consensus 222 ~--~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~ 259 (563)
+ .+.++|+||.+++.+.. ...++..+....+...|++
T Consensus 99 ~~~~~~~ad~vi~~~~~~~~-~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 99 RILDTGHVKLVLLAMPHHQG-NQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp TBCSCCCCCEEEECCSSHHH-HHHHHHHHHHTTCCSEEEE
T ss_pred hccCCCCCCEEEEeCCChHH-HHHHHHHHHHHCCCCEEEE
Confidence 2 26789999999986533 3334444444333444544
No 255
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.81 E-value=0.00013 Score=63.74 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=35.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
+++|.|+|+|.+|..++..|...|++|+++|++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~ 44 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNA 44 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 467999999999999999999999999999999876543
No 256
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.80 E-value=7.6e-06 Score=83.00 Aligned_cols=112 Identities=15% Similarity=0.076 Sum_probs=75.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||..+|..+...|++|+.||++++.. .. . .+.. .++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-------------------~~-----~---~~~~-~~l~ell~~ 198 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG-------------------IE-----D---YCTQ-VSLDEVLEK 198 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS-------------------CT-----T---TCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH-------------------HH-----h---cccc-CCHHHHHhh
Confidence 689999999999999999999999999999986421 00 0 0111 244 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC--CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~--l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|...+.+.-+-++..+.++++++++..+.+ +.-..+.+.+.. .-.-.++-.|.
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~ 262 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLD 262 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCT
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCC
Confidence 99999999976654433334566678999988654433 334466666642 22334455554
No 257
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.77 E-value=0.00012 Score=76.20 Aligned_cols=73 Identities=18% Similarity=0.148 Sum_probs=48.3
Q ss_pred ceeEEEEcCCcc-hHHHHHHHHh--C---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecC
Q 008509 147 VRKVAVIGGGLM-GSGIATAHIL--N---NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220 (563)
Q Consensus 147 ~~kv~ViGaG~m-G~~iA~~la~--~---G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 220 (563)
.+||+|||+|.. +..+...|+. . +.+|+++|+++++++... .+... ..... .++..++|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~-~~~~~---~~~~~-----------~~v~~t~d 66 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV-DFVKR---LVKDR-----------FKVLISDT 66 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH-HHHHH---HHTTS-----------SEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHH-HHHHH---HhhCC-----------eEEEEeCC
Confidence 368999999884 2222234454 3 568999999999877532 22111 11110 25777788
Q ss_pred c-ccccCCCEEEEec
Q 008509 221 Y-SEFKDVDMVIEAV 234 (563)
Q Consensus 221 ~-~~l~~aDlVieav 234 (563)
+ +++++||+||.++
T Consensus 67 ~~~al~~AD~Viita 81 (417)
T 1up7_A 67 FEGAVVDAKYVIFQF 81 (417)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhCCCCEEEEcC
Confidence 7 7899999999998
No 258
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.76 E-value=8.5e-05 Score=65.16 Aligned_cols=94 Identities=18% Similarity=0.175 Sum_probs=61.3
Q ss_pred cceeEEEEcC----CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 146 GVRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 146 ~~~kv~ViGa----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
.-++|+|||+ |.||..++..|.+.|++|+.+|++.+.+ ..+....++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~ 63 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSV 63 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSG
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCH
Confidence 3478999999 9999999999999999866666542210 113344455
Q ss_pred ccc-cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh
Q 008509 222 SEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 273 (563)
Q Consensus 222 ~~l-~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~ 273 (563)
+++ ..+|+||.++|. +.-.+++.++.+ .....++. .+|+.. .++.+.
T Consensus 64 ~el~~~vDlvii~vp~--~~v~~v~~~~~~-~g~~~i~~-~~~~~~-~~l~~~ 111 (138)
T 1y81_A 64 RELPKDVDVIVFVVPP--KVGLQVAKEAVE-AGFKKLWF-QPGAES-EEIRRF 111 (138)
T ss_dssp GGSCTTCCEEEECSCH--HHHHHHHHHHHH-TTCCEEEE-CTTSCC-HHHHHH
T ss_pred HHhCCCCCEEEEEeCH--HHHHHHHHHHHH-cCCCEEEE-cCccHH-HHHHHH
Confidence 443 579999999993 445566766655 44556554 345543 344433
No 259
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.71 E-value=0.0001 Score=72.11 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=50.2
Q ss_pred eEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCCC
Q 008509 149 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 228 (563)
Q Consensus 149 kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aD 228 (563)
+|+|||+|.||.+++..|...|++|+++|+++++.+...+. + +. . .++++.++++|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~----~------~~-------------~-~~~~~~~~~~D 173 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEE----F------GL-------------R-AVPLEKAREAR 173 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH----H------TC-------------E-ECCGGGGGGCS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----h------cc-------------c-hhhHhhccCCC
Confidence 79999999999999999999999999999998876543211 0 10 1 22443228899
Q ss_pred EEEEecCCCh
Q 008509 229 MVIEAVIESV 238 (563)
Q Consensus 229 lVieav~e~~ 238 (563)
+||.|+|...
T Consensus 174 ivi~~tp~~~ 183 (263)
T 2d5c_A 174 LLVNATRVGL 183 (263)
T ss_dssp EEEECSSTTT
T ss_pred EEEEccCCCC
Confidence 9999999763
No 260
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.68 E-value=0.00012 Score=74.06 Aligned_cols=110 Identities=15% Similarity=0.095 Sum_probs=69.9
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCC-------eEEEEeCC----HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCe
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVN----SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 215 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i 215 (563)
+||+|+|+ |.+|..++..|+..|+ +|+++|++ +++++.....+ ..... .....+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl--------~~~~~------~~~~~i 71 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI--------DDCAF------PLLAGM 71 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHH--------HTTTC------TTEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHH--------hhhcc------cccCcE
Confidence 68999998 9999999999999886 89999999 54443211111 11110 012345
Q ss_pred eeecCc-ccccCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh
Q 008509 216 KGVLDY-SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 273 (563)
Q Consensus 216 ~~~~~~-~~l~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~ 273 (563)
..++++ +++++||+||.+..- |..+.+++.+.+.+++.++++|+..| .|+..+...
T Consensus 72 ~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S--NPv~~~t~~ 142 (329)
T 1b8p_A 72 TAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG--NPANTNAYI 142 (329)
T ss_dssp EEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS--SSHHHHHHH
T ss_pred EEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc--CchHHHHHH
Confidence 556664 689999999987531 12344566677888875665554332 455544433
No 261
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.68 E-value=7.3e-05 Score=74.68 Aligned_cols=87 Identities=20% Similarity=0.198 Sum_probs=60.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|..+...|.+|+++|+++++.+... +.|. ......++ +.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g~-----------~~~~~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARIT-----------EMGL-----------VPFHTDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTC-----------EEEEGGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HCCC-----------eEEchhhHHHHhhC
Confidence 6899999999999999999999999999999987654321 1121 01011233 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEec
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 261 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sn 261 (563)
||+||.++|..+-- ++..+.+++++++++.
T Consensus 216 aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 216 IDICINTIPSMILN-----QTVLSSMTPKTLILDL 245 (300)
T ss_dssp CSEEEECCSSCCBC-----HHHHTTSCTTCEEEEC
T ss_pred CCEEEECCChhhhC-----HHHHHhCCCCCEEEEE
Confidence 99999999975321 1233456777776543
No 262
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.67 E-value=0.00015 Score=72.26 Aligned_cols=87 Identities=22% Similarity=0.236 Sum_probs=60.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|..+...|.+|+++|++++..+... +.|. ......++ +.+++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~-----------~~~~~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-----------EMGM-----------EPFHISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTS-----------EEEEGGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------HCCC-----------eecChhhHHHHhcC
Confidence 6899999999999999999999999999999987644321 1121 00011233 45789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEec
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 261 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sn 261 (563)
+|+||.++|..+--+ +..+.+++++++++.
T Consensus 214 aDvVi~~~p~~~i~~-----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 214 VDVCINTIPALVVTA-----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp CSEEEECCSSCCBCH-----HHHHHSCTTCEEEEC
T ss_pred CCEEEECCChHHhCH-----HHHHhcCCCCEEEEe
Confidence 999999999754221 223356778777643
No 263
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=97.65 E-value=1.3e-06 Score=92.18 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=76.5
Q ss_pred CccCCCCCCHHHHHhCCCcceecCCchHHHHHHHHHHhhhccCCccchhc--cccCCCCCh--------HHHHHHHHHHH
Q 008509 1 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL--HRTDKLGSL--------SEAREVLKLAR 70 (563)
Q Consensus 1 miltG~~i~A~eA~~~GLVd~vv~~~~l~~~A~~~a~~~~~~~~p~~~~~--~~~~~~~~~--------~~~~~~~~~~~ 70 (563)
|++||++++|+||+++||||+|||++++++.|.++|++++..+ |..... -....+... ......+..++
T Consensus 198 LlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~-p~Av~~K~l~~~~l~r~~~~~gl~y~~~~~ai~ra~ 276 (556)
T 2w3p_A 198 FCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQS-DRPAHAQGVPLTRIERTDREDGLTYKTLDVTIDRAK 276 (556)
T ss_dssp HTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTC-CCCTTCCCCCCCCCCCEEETTEEEETTEEEEEETTT
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCC-hHHHhhhhhhcchhhhhhhhccccHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999999998865 221110 000001000 00000111122
Q ss_pred HHHH-hhCCCChhHHHHHHHHHHhhccCchhhHHHHHHHHHHHhcCHHH-HHHHHHHhhhhhhcc
Q 008509 71 LQAK-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS-RGLVHVFFAQRATSK 133 (563)
Q Consensus 71 ~~~~-~~~~~~~A~~~~~~~i~~~~~~~~~~~l~~E~~~f~~l~~s~~~-~~~~~aF~~kr~~~k 133 (563)
.... +.++..+|+.+++++|.++. ..|..+..++|. .+.+++|+.+.....
T Consensus 277 r~a~~~~~g~~~a~~~~ld~i~aa~------------~~~~~l~~~~el~~All~l~~ne~~~~~ 329 (556)
T 2w3p_A 277 RIATFTAKAPQTEPPASIDAIVAAG------------ANWWPLKFAREFDDAILSMRTNELAVGT 329 (556)
T ss_dssp TEEEEEEECCSSCCCCSHHHHHHHG------------GGSHHHHHHHHHHHHHHHHHHHCSSCCE
T ss_pred HHHHHHhcCCCCCchhhHHHHHHhh------------hcchhhhhhhHHHHHHHhhhhccHHHhH
Confidence 2222 56667778888887776543 445555556666 678999998876433
No 264
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.60 E-value=9.9e-05 Score=65.34 Aligned_cols=101 Identities=12% Similarity=0.037 Sum_probs=64.9
Q ss_pred eeEEEEcC----CcchHHHHHHHHhCCCeEEEEeCCH--HHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 148 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGa----G~mG~~iA~~la~~G~~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
++|+|||+ |.||..++..|.+.|++|+.+|++. +.+ ..+....++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 57999999 8999999999999999977666653 110 113334455
Q ss_pred ccc-cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhcc-CCCceee
Q 008509 222 SEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 282 (563)
Q Consensus 222 ~~l-~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~-~~~r~ig 282 (563)
+++ ..+|+||.++|.. .-.+++.++.+ .....++.. +|+. ..++.+... ..-+++|
T Consensus 65 ~el~~~~Dlvii~vp~~--~v~~v~~~~~~-~g~~~i~i~-~~~~-~~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 65 ADVPEKVDMVDVFRNSE--AAWGVAQEAIA-IGAKTLWLQ-LGVI-NEQAAVLAREAGLSVVM 122 (145)
T ss_dssp TTCSSCCSEEECCSCST--HHHHHHHHHHH-HTCCEEECC-TTCC-CHHHHHHHHTTTCEEEC
T ss_pred HHcCCCCCEEEEEeCHH--HHHHHHHHHHH-cCCCEEEEc-CChH-HHHHHHHHHHcCCEEEc
Confidence 443 5789999999953 34566666655 345565543 4554 344444433 3445554
No 265
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.58 E-value=0.00015 Score=77.04 Aligned_cols=75 Identities=13% Similarity=0.188 Sum_probs=49.5
Q ss_pred eeEEEEcCCcchHH--HHHHHHh----C--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 148 RKVAVIGGGLMGSG--IATAHIL----N--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 148 ~kv~ViGaG~mG~~--iA~~la~----~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
.||+|||+|..|.. +...++. . +.+|+++|+++++++.....+++..+.. |. .-++..++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~---~~---------~~~i~~t~ 68 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEEL---NS---------PVKVVKTE 68 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHH---TC---------CCEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHc---CC---------CeEEEEeC
Confidence 48999999998754 2233332 2 3589999999998776433333322111 10 12477888
Q ss_pred Cc-ccccCCCEEEEec
Q 008509 220 DY-SEFKDVDMVIEAV 234 (563)
Q Consensus 220 ~~-~~l~~aDlVieav 234 (563)
|+ +++++||+||.++
T Consensus 69 d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 69 SLDEAIEGADFIINTA 84 (477)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEECc
Confidence 88 5799999999886
No 266
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.57 E-value=0.00063 Score=64.32 Aligned_cols=91 Identities=16% Similarity=0.141 Sum_probs=60.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecC---c--
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLD---Y-- 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~---~-- 221 (563)
+||.|+|+|.+|..+|..|...|++|+++|++++.++...+ ..|. ..+.+ .++ +
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~----------~~~~----------~~i~gd~~~~~~l~~ 60 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAK----------KLKA----------TIIHGDGSHKEILRD 60 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----------HSSS----------EEEESCTTSHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----------HcCC----------eEEEcCCCCHHHHHh
Confidence 47999999999999999999999999999999998765321 0110 00111 011 1
Q ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHhh-CCCCeEEEe
Q 008509 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILAT 260 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~~k~~v~~~l~~~-~~~~~ii~s 260 (563)
..+.+||+||.+++.+.. ..+...+... .+...+++-
T Consensus 61 a~i~~ad~vi~~~~~d~~--n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 61 AEVSKNDVVVILTPRDEV--NLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp HTCCTTCEEEECCSCHHH--HHHHHHHHHHTSCCCEEEEC
T ss_pred cCcccCCEEEEecCCcHH--HHHHHHHHHHHcCCCeEEEE
Confidence 236899999999987642 2334444443 455556653
No 267
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.50 E-value=7.9e-05 Score=78.61 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=66.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||.++|..+...|.+|+++|+++.....+. ..| +. ..++ +.+++
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g-------------~~-~~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEG-------------FN-VVTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcC-------------CE-ecCHHHHHhc
Confidence 6899999999999999999999999999999987643221 112 11 1244 46889
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC---CCHHHHhh
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGE 272 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~---l~i~~la~ 272 (563)
||+||.+.. ...+ +-++..+.++++++|+...++ +....+.+
T Consensus 313 aDiVi~~~~-t~~l---I~~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 313 GDFFITCTG-NVDV---IKLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp CSEEEECCS-SSSS---BCHHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred CCEEEECCC-hhhh---cCHHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 999999962 2211 123445568999988765544 34445655
No 268
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.49 E-value=0.00052 Score=68.86 Aligned_cols=110 Identities=18% Similarity=0.136 Sum_probs=66.6
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCC--eEEEEeC--CHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecC--
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD-- 220 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~--~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~-- 220 (563)
+||+|+|+ |.+|..++..|+..|+ ++.++|+ ++++++.....+.+.. ...+. .-.+..++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~---~~~~~---------~~~i~~~~d~l 68 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL---AGTRS---------DANIYVESDEN 68 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH---TTSCC---------CCEEEEEETTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH---HhcCC---------CeEEEeCCcch
Confidence 48999999 9999999999998885 7999999 7665433211121110 00000 012333344
Q ss_pred cccccCCCEEEEec--CC------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh
Q 008509 221 YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK 273 (563)
Q Consensus 221 ~~~l~~aDlVieav--~e------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~ 273 (563)
++++++||+||.+. |. |..+.+++.+.+.+++ ++++... |.|+..+...
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~--SNPv~~~t~~ 131 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVI--TNPVDVMTYK 131 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEEC--SSSHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEe--cCcHHHHHHH
Confidence 68999999999876 21 2223445666677777 5544432 3466544433
No 269
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.49 E-value=0.0002 Score=71.67 Aligned_cols=103 Identities=19% Similarity=0.272 Sum_probs=63.3
Q ss_pred eeEEEEc-CCcchHHHHHHHHhC-C--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee---ecC
Q 008509 148 RKVAVIG-GGLMGSGIATAHILN-N--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 220 (563)
Q Consensus 148 ~kv~ViG-aG~mG~~iA~~la~~-G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 220 (563)
+||+||| +|.+|.+++..|+.. + .+++++|+++ .++ +. . ++ ...... ...+.. +.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~-G~--a---~D--l~~~~~--------~~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTP-GV--A---VD--LSHIPT--------AVKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THH-HH--H---HH--HHTSCS--------SEEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-Cch-hH--H---HH--hhCCCC--------CceEEEecCCCc
Confidence 4899999 799999999999875 5 5899999987 322 11 0 00 011100 112332 246
Q ss_pred cccccCCCEEEEecCC--------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 008509 221 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270 (563)
Q Consensus 221 ~~~l~~aDlVieav~e--------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~l 270 (563)
++++++||+||.+... |..+.+++...+.++++ ++++...| .|++.+
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvvt--NPvd~~ 124 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGIIT--NPVNTT 124 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEECS--SCHHHH
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEec--CcchhH
Confidence 7899999999998632 22334455566777765 55444332 355433
No 270
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.49 E-value=2.8e-05 Score=75.60 Aligned_cols=97 Identities=11% Similarity=0.029 Sum_probs=62.4
Q ss_pred eEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 149 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 149 kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
+|.|||+|.||.+++..|+..|. +|++++|++++++... +. + . .....++ +.+.+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la-----------~~--~---------~-~~~~~~~~~~~~~ 166 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALD-----------FP--V---------K-IFSLDQLDEVVKK 166 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC-----------SS--C---------E-EEEGGGHHHHHHT
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-----------HH--c---------c-cCCHHHHHhhhcC
Confidence 79999999999999999999999 9999999998755421 10 0 0 0112233 45688
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHh
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la 271 (563)
+|+||.|+|..+.-....+. ...++++.++.+.... +..-+.
T Consensus 167 aDiVInatp~gm~p~~~~i~--~~~l~~~~~V~Divy~-~T~ll~ 208 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVS--DDSLKNLSLVYDVIYF-DTPLVV 208 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCC--HHHHTTCSEEEECSSS-CCHHHH
T ss_pred CCEEEECCCCCCCCCCCCCC--HHHhCcCCEEEEeeCC-CcHHHH
Confidence 99999999753210000110 1234678888776665 433333
No 271
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.44 E-value=0.00013 Score=77.27 Aligned_cols=88 Identities=17% Similarity=0.137 Sum_probs=62.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.||.++|..+...|.+|+++|+++.....+. ..| ... .++ +.+++
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G-------------~~~-~~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEG-------------YRV-VTMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcC-------------CEe-CCHHHHHhc
Confidence 6899999999999999999999999999999987532211 112 111 234 56889
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~ 264 (563)
||+||.++...--+ -++..+.++++++|+...++
T Consensus 333 aDiVi~~~~t~~lI----~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNYHVI----NHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSSCSB----CHHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCccccc----CHHHHhhCCCCcEEEEcCCC
Confidence 99999998322112 23455668999988755544
No 272
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.42 E-value=0.00031 Score=74.53 Aligned_cols=87 Identities=26% Similarity=0.285 Sum_probs=62.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||+|.||..+|+.+...|.+|+++|++++.++.+. +.|. . ..++ +.+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-----------~~Ga-------------~-~~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAM-----------MEGF-------------D-VVTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTC-------------E-ECCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcCC-------------E-EecHHHHHhC
Confidence 6899999999999999999999999999999998765532 2221 1 1122 35689
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
+|+||++++...-+. .+..+.++++.+++...+
T Consensus 330 aDvVi~atgt~~~i~----~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 330 ADIVVTATGNKDIIM----LEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHSCTTCEEEECSS
T ss_pred CCEEEECCCCHHHHH----HHHHHhcCCCcEEEEeCC
Confidence 999999987543232 234456788888765443
No 273
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.40 E-value=0.00022 Score=72.73 Aligned_cols=94 Identities=19% Similarity=0.178 Sum_probs=61.6
Q ss_pred eeEEEEcCCcchHHHHHHHHh--CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHc-CCCCHHHHHhhhcCeeeecCc-cc
Q 008509 148 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR-GKLTQDKANNALKMLKGVLDY-SE 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~-g~~~~~~~~~~~~~i~~~~~~-~~ 223 (563)
++|+|||+|.||..++..++. ...+|++||+++++.++..+.+. +. |. .+...+++ +.
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~-------~~~g~-----------~~~~~~~~~ea 191 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLK-------EYSGL-----------TIRRASSVAEA 191 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHT-------TCTTC-----------EEEECSSHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHH-------hccCc-----------eEEEeCCHHHH
Confidence 689999999999999988753 35689999999998776432210 00 10 13344555 56
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
+++||+||.|+|.... ..++. .+.+++++.+...+|
T Consensus 192 v~~aDiVi~aTps~~~--~pvl~--~~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 192 VKGVDIITTVTADKAY--ATIIT--PDMLEPGMHLNAVGG 227 (350)
T ss_dssp HTTCSEEEECCCCSSE--EEEEC--GGGCCTTCEEEECSC
T ss_pred HhcCCEEEEeccCCCC--Cceec--HHHcCCCCEEEECCC
Confidence 7899999999997520 01111 135677776665444
No 274
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.40 E-value=0.0015 Score=62.84 Aligned_cols=88 Identities=19% Similarity=0.181 Sum_probs=59.1
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 225 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 225 (563)
|.||+|+|+|.||..++..+...+.+++ ++|++++. .. .+..++|++.+.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~~-------------gv~v~~dl~~l~ 53 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------TT-------------PYQQYQHIADVK 53 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------------------C-------------CSCBCSCTTTCT
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------cC-------------CCceeCCHHHHh
Confidence 5799999999999999999998876765 47887641 01 233456665444
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~l 270 (563)
++|+||++...+ .+...+. +..+.-+++.|++++..++
T Consensus 54 ~~DVvIDft~p~-----a~~~~~~--l~~g~~vVigTTG~s~e~~ 91 (243)
T 3qy9_A 54 GADVAIDFSNPN-----LLFPLLD--EDFHLPLVVATTGEKEKLL 91 (243)
T ss_dssp TCSEEEECSCHH-----HHHHHHT--SCCCCCEEECCCSSHHHHH
T ss_pred CCCEEEEeCChH-----HHHHHHH--HhcCCceEeCCCCCCHHHH
Confidence 999999876422 2333333 5666656667777765443
No 275
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.34 E-value=0.00013 Score=70.23 Aligned_cols=77 Identities=22% Similarity=0.175 Sum_probs=53.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cc-
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF- 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l- 224 (563)
+||+|||+|.||..++..+...|++| .++|+++. .+ . ..++++ .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~-----------------------------~--~~~~~~~l~~ 48 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HE-----------------------------K--MVRGIDEFLQ 48 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CT-----------------------------T--EESSHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hh-----------------------------h--hcCCHHHHhc
Confidence 37999999999999999999999997 69998742 10 0 234443 34
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEec
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 261 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sn 261 (563)
.++|+||+|+|.+.. . ++ +...+..+..+.+.
T Consensus 49 ~~~DvVv~~~~~~~~-~-~~---~~~~l~~G~~vv~~ 80 (236)
T 2dc1_A 49 REMDVAVEAASQQAV-K-DY---AEKILKAGIDLIVL 80 (236)
T ss_dssp SCCSEEEECSCHHHH-H-HH---HHHHHHTTCEEEES
T ss_pred CCCCEEEECCCHHHH-H-HH---HHHHHHCCCcEEEE
Confidence 689999999985532 2 22 23344556655544
No 276
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.31 E-value=0.00043 Score=69.74 Aligned_cols=70 Identities=17% Similarity=0.046 Sum_probs=51.5
Q ss_pred eeEEEEcCCcchHHHHHHHHh--CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccc
Q 008509 148 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 224 (563)
++|+|||+|.||..++..++. ...+|.+|||++++.++..+.+. ..+ + .+. .+++ +.+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~-------~~~-~----------~~~-~~~~~e~v 186 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCE-------DRG-I----------SAS-VQPAEEAS 186 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHH-------HTT-C----------CEE-ECCHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHH-------hcC-c----------eEE-ECCHHHHh
Confidence 689999999999999998886 35689999999998776543221 111 1 133 4555 467
Q ss_pred cCCCEEEEecCCC
Q 008509 225 KDVDMVIEAVIES 237 (563)
Q Consensus 225 ~~aDlVieav~e~ 237 (563)
++|+||.|+|..
T Consensus 187 -~aDvVi~aTp~~ 198 (322)
T 1omo_A 187 -RCDVLVTTTPSR 198 (322)
T ss_dssp -SSSEEEECCCCS
T ss_pred -CCCEEEEeeCCC
Confidence 999999999864
No 277
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.31 E-value=0.00018 Score=70.99 Aligned_cols=71 Identities=13% Similarity=0.228 Sum_probs=51.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc-c
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-K 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l-~ 225 (563)
++|.|+|+|.||.+++..|+..|. +|++++|++++.+...+.+. ..+ .+... +++.+ .
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~-------~~~------------~~~~~-~~~~l~~ 186 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA-------AYG------------EVKAQ-AFEQLKQ 186 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG-------GGS------------CEEEE-EGGGCCS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh-------ccC------------CeeEe-eHHHhcC
Confidence 689999999999999999999997 99999999988665432211 111 12211 22222 7
Q ss_pred CCCEEEEecCCCh
Q 008509 226 DVDMVIEAVIESV 238 (563)
Q Consensus 226 ~aDlVieav~e~~ 238 (563)
++|+||.|+|..+
T Consensus 187 ~aDiIInaTp~gm 199 (281)
T 3o8q_A 187 SYDVIINSTSASL 199 (281)
T ss_dssp CEEEEEECSCCCC
T ss_pred CCCEEEEcCcCCC
Confidence 8999999998765
No 278
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.28 E-value=0.00042 Score=67.72 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=50.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
++|.|||+|.||.+++..|+..|.+|++++|++++.+... . + + +. ..+++.+.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~----~------~-------------~~-~~~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-R----L------G-------------CD-CFMEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-H----H------T-------------CE-EESSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H----C------C-------------Ce-EecHHHhccC
Confidence 6899999999999999999999999999999998765532 1 0 1 11 1134445589
Q ss_pred CEEEEecCCCh
Q 008509 228 DMVIEAVIESV 238 (563)
Q Consensus 228 DlVieav~e~~ 238 (563)
|+||.|+|..+
T Consensus 174 DiVInaTp~Gm 184 (269)
T 3phh_A 174 DLIINATSASL 184 (269)
T ss_dssp SEEEECCTTCC
T ss_pred CEEEEcccCCC
Confidence 99999998653
No 279
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.26 E-value=0.00017 Score=73.75 Aligned_cols=107 Identities=12% Similarity=0.099 Sum_probs=63.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHH----HHHHcC----CCCHHHHHhhhcCeeeec
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVR----GLVTRG----KLTQDKANNALKMLKGVL 219 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~----~~~~~g----~~~~~~~~~~~~~i~~~~ 219 (563)
.+|+|||+|.||..+|+.+...|.+|+++|+++++++.+.+ .-..+- .....+ .++++.... ...
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa~~~~l~~~~~~~~gya~~~~~~~~~~------~~~ 257 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGAQWLDLGIDAAGEGGYARELSEAERAQ------QQQ 257 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTCEECCCC-------------CHHHHHH------HHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccchhhhhHHHHhh------hHH
Confidence 68999999999999999999999999999999988766432 000000 000000 011111000 011
Q ss_pred Cc-ccccCCCEEEEec--CCChHHHHHHHHHHHhhCCCCeEEEecC
Q 008509 220 DY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 220 ~~-~~l~~aDlVieav--~e~~~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
++ +.+++||+||.++ |....- .-+-++..+.++++++|++.+
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg~~ap-~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPGRPAP-RLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCC-CCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHhcCCEEEECCCCCCcccc-eeecHHHHhcCCCCcEEEEEe
Confidence 22 4679999999986 432110 012245566688999887643
No 280
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.25 E-value=0.00015 Score=74.67 Aligned_cols=39 Identities=18% Similarity=0.143 Sum_probs=36.2
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
.+|+|||+|.||..+|+.+...|.+|+++|++++.++.+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~ 229 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV 229 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 689999999999999999999999999999999887664
No 281
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.24 E-value=0.00036 Score=69.52 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=35.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~ 186 (563)
++|.|||+|.||.+++..|+..|+ +|++++|++++++..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~l 181 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERL 181 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999998 999999999876653
No 282
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.23 E-value=0.00039 Score=71.72 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=61.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCee--eecCc-ccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK--GVLDY-SEF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~--~~~~~-~~l 224 (563)
++|+|||+|.||..+|+.+...|.+|+++|+++++++.+.+. -|.-. ... ...++ +.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~----------~g~~~---------~~~~~~~~~l~~~l 229 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAE----------FCGRI---------HTRYSSAYELEGAV 229 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------TTTSS---------EEEECCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh----------cCCee---------EeccCCHHHHHHHH
Confidence 689999999999999999999999999999999887654210 11100 000 00112 345
Q ss_pred cCCCEEEEecCCCh-HHHHHHHHHHHhhCCCCeEEEecC
Q 008509 225 KDVDMVIEAVIESV-PLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 225 ~~aDlVieav~e~~-~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
.++|+||+|++... +...-+.++..+.++++.+|+..+
T Consensus 230 ~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 230 KRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp HHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred cCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 78999999885332 111112344455678888776543
No 283
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.20 E-value=0.00053 Score=68.75 Aligned_cols=92 Identities=13% Similarity=0.129 Sum_probs=60.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 223 (563)
.++|+|||+|.||..++..+... ..+|++||++ +.++..+++...+ |. .+... ++ ++
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~------g~-----------~~~~~-~~~ea 180 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRC------GV-----------PARMA-APADI 180 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHH------TS-----------CEEEC-CHHHH
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhc------CC-----------eEEEe-CHHHH
Confidence 36899999999999999998763 4589999999 3333222221111 11 13334 55 56
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~ 264 (563)
+++||+||.|+|... .++. .+.++++++|.+..|.
T Consensus 181 v~~aDIVi~aT~s~~----pvl~--~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 181 AAQADIVVTATRSTT----PLFA--GQALRAGAFVGAIGSS 215 (313)
T ss_dssp HHHCSEEEECCCCSS----CSSC--GGGCCTTCEEEECCCS
T ss_pred HhhCCEEEEccCCCC----cccC--HHHcCCCcEEEECCCC
Confidence 789999999998642 2222 3457788877665553
No 284
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.18 E-value=0.00042 Score=71.83 Aligned_cols=85 Identities=21% Similarity=0.195 Sum_probs=59.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.+|.++|..+...|.+|+++|+++.....+. ..| .. ..++ +.+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-----------~~G-------------~~-~~sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-----------MEG-------------YQ-VLLVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-----------HhC-------------Ce-ecCHHHHHhh
Confidence 6899999999999999999999999999999987644321 112 11 1244 57889
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEec
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 261 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sn 261 (563)
||+||.+....--+. .+..+.+++++||+..
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVINv 297 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVCNI 297 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEEEC
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEEEe
Confidence 999998654321111 2344567899988643
No 285
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.18 E-value=0.0019 Score=57.26 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=33.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCC-HHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN-SEYLLK 185 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~-~~~~~~ 185 (563)
++|.|+|+|.+|..++..|...|++|+++|++ ++..+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~ 42 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQ 42 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHH
Confidence 57999999999999999999999999999998 454433
No 286
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.17 E-value=0.00096 Score=67.00 Aligned_cols=95 Identities=9% Similarity=0.011 Sum_probs=60.4
Q ss_pred ceeEEEEcCCcchHH-HHHHHHh-CCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 147 VRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~-iA~~la~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
..||+|||+|.||.. ++..+.+ .|++|+ ++|+++++.+...+. .| +...++++.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~----------~g-------------~~~~~~~~~ 61 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES----------WR-------------IPYADSLSS 61 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH----------HT-------------CCBCSSHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------cC-------------CCccCcHHH
Confidence 468999999999997 8888876 478876 999998876543210 01 113345544
Q ss_pred c-cCCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 224 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 224 l-~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
+ .++|+|+.|+|..... ++... .+..+. +++....+.+..+
T Consensus 62 l~~~~D~V~i~tp~~~h~--~~~~~---al~~G~~v~~eKP~~~~~~~ 104 (319)
T 1tlt_A 62 LAASCDAVFVHSSTASHF--DVVST---LLNAGVHVCVDKPLAENLRD 104 (319)
T ss_dssp HHTTCSEEEECSCTTHHH--HHHHH---HHHTTCEEEEESSSCSSHHH
T ss_pred hhcCCCEEEEeCCchhHH--HHHHH---HHHcCCeEEEeCCCCCCHHH
Confidence 4 6799999999977542 22222 233444 5554444555554
No 287
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.16 E-value=0.0011 Score=67.05 Aligned_cols=101 Identities=16% Similarity=0.190 Sum_probs=63.1
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCC-------eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~-------~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
-||+|+|+ |.+|.+++..|+.... ++.|+|+++..- .. +.+.-.+ +.... .....+..++
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~-~~-~Gva~DL----~~~~~------~~~~~~~~~~ 92 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALK-AL-AGVEAEL----EDCAF------PLLDKVVVTA 92 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH-HH-HHHHHHH----HHTTC------TTEEEEEEES
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccc-cc-hhhhhhh----hhcCc------cCCCcEEEcC
Confidence 58999997 9999999999998754 899999976421 11 1111111 11100 0112344444
Q ss_pred C-cccccCCCEEEEec--CC------------ChHHHHHHHHHHHhhCCCCeEEEe
Q 008509 220 D-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILAT 260 (563)
Q Consensus 220 ~-~~~l~~aDlVieav--~e------------~~~~k~~v~~~l~~~~~~~~ii~s 260 (563)
+ ++++++||+||.+. |- |..+.+++...|.+++++++++..
T Consensus 93 ~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlv 148 (345)
T 4h7p_A 93 DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVV 148 (345)
T ss_dssp CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEE
Confidence 4 47899999999864 21 233455555667888888886543
No 288
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.15 E-value=0.00079 Score=69.19 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=59.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee----ecCc-c
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG----VLDY-S 222 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~----~~~~-~ 222 (563)
++|+|+|+|.+|..+++.+...|.+|+++|+++++++.+.+. .|. .+.. ..++ +
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~----------~g~-----------~~~~~~~~~~~l~~ 225 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV----------FGG-----------RVITLTATEANIKK 225 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------TTT-----------SEEEEECCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----------cCc-----------eEEEecCCHHHHHH
Confidence 689999999999999999999999999999999876653210 111 0100 0112 3
Q ss_pred cccCCCEEEEecCCChH-HHHHHHHHHHhhCCCCeEEEecC
Q 008509 223 EFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~-~k~~v~~~l~~~~~~~~ii~snt 262 (563)
.+.++|+||+|++.... ...-+.++..+.++++.+|+..+
T Consensus 226 ~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 226 SVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp HHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred HHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 45789999999974421 11112344455667777665433
No 289
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.14 E-value=0.0023 Score=64.89 Aligned_cols=96 Identities=17% Similarity=0.230 Sum_probs=63.1
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
+.||+|||+|.||..++..+.+. +++|+ ++|++++.++...+ +.| +...++++ .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------~~g-------------~~~~~~~~~~ 60 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAE----------ANG-------------AEAVASPDEV 60 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------TTT-------------CEEESSHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH----------HcC-------------CceeCCHHHH
Confidence 36899999999999999999886 78876 89999987655321 011 34456664 4
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 269 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~ 269 (563)
+. ++|+|+.|+|..... ++.....+. ...+++....+.++.+
T Consensus 61 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~ 104 (344)
T 3euw_A 61 FARDDIDGIVIGSPTSTHV--DLITRAVER--GIPALCEKPIDLDIEM 104 (344)
T ss_dssp TTCSCCCEEEECSCGGGHH--HHHHHHHHT--TCCEEECSCSCSCHHH
T ss_pred hcCCCCCEEEEeCCchhhH--HHHHHHHHc--CCcEEEECCCCCCHHH
Confidence 55 799999999987643 333332221 2235655444555554
No 290
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.13 E-value=0.0015 Score=65.30 Aligned_cols=95 Identities=12% Similarity=-0.029 Sum_probs=61.7
Q ss_pred ceeEEEEcCCcchHH-HHHHHHh-CCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-
Q 008509 147 VRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 222 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~-iA~~la~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 222 (563)
..||+|||+|.||.. ++..+.+ .+++|+ ++|+++++++...+. .| +...+|++
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------~~-------------~~~~~~~~~ 62 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSD----------YR-------------IMPFDSIES 62 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHH----------HT-------------CCBCSCHHH
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------cC-------------CCCcCCHHH
Confidence 468999999999997 8887876 478877 899999887654211 01 11244553
Q ss_pred cccCCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 223 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
.+.++|+|+.|+|..... ++.... +..+ .+++.-..+.+..+
T Consensus 63 ll~~~D~V~i~tp~~~h~--~~~~~a---l~~gk~vl~EKP~~~~~~~ 105 (308)
T 3uuw_A 63 LAKKCDCIFLHSSTETHY--EIIKIL---LNLGVHVYVDKPLASTVSQ 105 (308)
T ss_dssp HHTTCSEEEECCCGGGHH--HHHHHH---HHTTCEEEECSSSSSSHHH
T ss_pred HHhcCCEEEEeCCcHhHH--HHHHHH---HHCCCcEEEcCCCCCCHHH
Confidence 456899999999977543 333332 2233 35555455555554
No 291
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.12 E-value=0.0031 Score=64.29 Aligned_cols=71 Identities=15% Similarity=0.265 Sum_probs=53.5
Q ss_pred cceeEEEEcCCcchHHHHHHHHhC--CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~--G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
+..||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .| +...+|++
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~----------~~-------------~~~~~~~~ 68 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER----------TG-------------ARGHASLT 68 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------HC-------------CEEESCHH
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH----------cC-------------CceeCCHH
Confidence 456899999999999999999887 78865 899999886653211 01 34566775
Q ss_pred c-cc--CCCEEEEecCCChH
Q 008509 223 E-FK--DVDMVIEAVIESVP 239 (563)
Q Consensus 223 ~-l~--~aDlVieav~e~~~ 239 (563)
+ ++ ++|+|+.|+|....
T Consensus 69 ~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 69 DMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp HHHHHCCCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEECCCcHHH
Confidence 3 43 79999999997754
No 292
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.11 E-value=0.001 Score=68.40 Aligned_cols=151 Identities=12% Similarity=0.074 Sum_probs=91.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
++|+|||.|..|.+-|+.|..+|++|++--|.....+. .+.++++.+.| ..+.+-.++++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~-----~~S~~~A~~~G-------------f~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEK-----RASWRKATENG-------------FKVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTT-----CHHHHHHHHTT-------------CEEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccc-----cchHHHHHHCC-------------CEecCHHHHHHhC
Confidence 78999999999999999999999999887663321111 01122233434 3333334789999
Q ss_pred CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCC--ceeecccCCCCC----------CCCeE
Q 008509 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD--RIIGAHFFSPAH----------VMPLL 295 (563)
Q Consensus 228 DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~--r~ig~hf~~P~~----------~~~lv 295 (563)
|+|+..+|+.. -..++.+|.++++++..+.- +.+..|.. ..+..|. .++=+-|-.|-+ ..|.+
T Consensus 100 DvV~~L~PD~~--q~~vy~~I~p~lk~G~~L~f-aHGFnI~~--~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~l 174 (491)
T 3ulk_A 100 DLVINLTPDKQ--HSDVVRTVQPLMKDGAALGY-SHGFNIVE--VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTL 174 (491)
T ss_dssp SEEEECSCGGG--HHHHHHHHGGGSCTTCEEEE-SSCHHHHT--TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEE
T ss_pred CEEEEeCChhh--HHHHHHHHHhhCCCCCEEEe-cCcccccc--cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceE
Confidence 99999999764 45788999999999987753 33443331 1111121 222222222211 22333
Q ss_pred EEEe-CCCCCHHHHHHHHHHHHHhCCc
Q 008509 296 EIVR-TERTSAQVILDLMTVGKIIKKV 321 (563)
Q Consensus 296 Eiv~-~~~t~~~~~~~~~~l~~~lGk~ 321 (563)
--|- ....+-...+.+..+...+|..
T Consensus 175 iAVhqeqD~sG~a~~~AlayA~aiG~~ 201 (491)
T 3ulk_A 175 IAVHPENDPKGEGMAIAKAWAAATGGH 201 (491)
T ss_dssp EEECGGGCTTSCHHHHHHHHHHHHTGG
T ss_pred EEEEeCCCCchhHHHHHHHHHHhcCCC
Confidence 3331 1233445677778888888753
No 293
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.11 E-value=0.00049 Score=69.57 Aligned_cols=112 Identities=21% Similarity=0.182 Sum_probs=77.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.+|..+|..+..-|.+|..||+....... +.+ +. ..++ +.++.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-------------~~~-------------~~-~~~l~ell~~ 194 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CV-YTSLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CE-ECCHHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchhhh-------------hcC-------------ce-ecCHHHHHhh
Confidence 68999999999999999999999999999987542111 111 11 2234 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC---CCHHHHhhhccC-CCceeecccCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGEKTSS-QDRIIGAHFFS 287 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~---l~i~~la~~~~~-~~r~ig~hf~~ 287 (563)
||+|+.++|-..+.+.-+=++..+.++++++|+ |||- +.-..|.+++.. .-.-.++-.|.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lI-N~aRG~iVde~aL~~aL~~g~i~gA~LDV~~ 258 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLI-NTARGKVVDTDALYRAYQRGKFSGLGLDVFE 258 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHHTTCEEEEEESCCT
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEE-ecCccccccHHHHHHHHHhCCceEEEEeCCC
Confidence 999999999887765544456667799999886 5664 344567666643 22334455443
No 294
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.10 E-value=0.0029 Score=59.92 Aligned_cols=130 Identities=14% Similarity=0.159 Sum_probs=80.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
++|.|||+|.+|..-+..|+++|.+|++++.+.... +..+.+.+.++ .+...-..+.+.++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~----------l~~l~~~~~i~---------~i~~~~~~~dL~~a 92 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAE----------INEWEAKGQLR---------VKRKKVGEEDLLNV 92 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHH----------HHHHHHTTSCE---------EECSCCCGGGSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHH----------HHHHHHcCCcE---------EEECCCCHhHhCCC
Confidence 689999999999999999999999999999864321 11222333221 01111123578999
Q ss_pred CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCC--CCCCeEEEEeCCCCCH
Q 008509 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTSA 305 (563)
Q Consensus 228 DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~--~~~~lvEiv~~~~t~~ 305 (563)
|+||-|. ++.++...+ ...++.+ |++.... .|+ -..|+.|. ...++.--|.+...+|
T Consensus 93 dLVIaAT-~d~~~N~~I----~~~ak~g-i~VNvvD------------~p~---~~~f~~Paiv~rg~l~iaIST~G~sP 151 (223)
T 3dfz_A 93 FFIVVAT-NDQAVNKFV----KQHIKND-QLVNMAS------------SFS---DGNIQIPAQFSRGRLSLAISTDGASP 151 (223)
T ss_dssp SEEEECC-CCTHHHHHH----HHHSCTT-CEEEC--------------------CCSEECCEEEEETTEEEEEECTTSCH
T ss_pred CEEEECC-CCHHHHHHH----HHHHhCC-CEEEEeC------------Ccc---cCeEEEeeEEEeCCEEEEEECCCCCc
Confidence 9999774 555554444 3345533 3332211 121 12344454 3567777788888899
Q ss_pred HHHHHHHHHHHH
Q 008509 306 QVILDLMTVGKI 317 (563)
Q Consensus 306 ~~~~~~~~l~~~ 317 (563)
.....+++-++.
T Consensus 152 ~la~~iR~~ie~ 163 (223)
T 3dfz_A 152 LLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888887777654
No 295
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.09 E-value=0.00046 Score=67.82 Aligned_cols=71 Identities=15% Similarity=0.251 Sum_probs=50.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc--c
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF--K 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l--~ 225 (563)
++|.|+|+|.||.+++..|+..|.+|++++|+.++++...+.+. ..+ .+.. .+++.+ .
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~-------~~~------------~~~~-~~~~~~~~~ 179 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ-------PYG------------NIQA-VSMDSIPLQ 179 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG-------GGS------------CEEE-EEGGGCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcc-------ccC------------CeEE-eeHHHhccC
Confidence 68999999999999999999999999999999987665432110 001 1111 223444 3
Q ss_pred CCCEEEEecCCCh
Q 008509 226 DVDMVIEAVIESV 238 (563)
Q Consensus 226 ~aDlVieav~e~~ 238 (563)
++|+||.|+|...
T Consensus 180 ~~DivIn~t~~~~ 192 (272)
T 1p77_A 180 TYDLVINATSAGL 192 (272)
T ss_dssp CCSEEEECCCC--
T ss_pred CCCEEEECCCCCC
Confidence 8999999998654
No 296
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.08 E-value=0.0017 Score=65.38 Aligned_cols=95 Identities=14% Similarity=0.057 Sum_probs=61.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cc
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 224 (563)
.||+|||+|.||..++..+.+. ++++ .++|+++++.+...+ +.| .....+|++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~----------~~~------------~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFAS----------RYQ------------NIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGG----------GSS------------SCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH----------HcC------------CCeEeCCHHHHh
Confidence 5899999999999999999876 6776 489999887554210 111 123456665 44
Q ss_pred -cCCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 225 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 225 -~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
.++|+|+.|+|..... ++..+ .+..+. +++-...+.+..+
T Consensus 60 ~~~~D~V~i~tp~~~h~--~~~~~---al~~gk~V~~EKP~~~~~~~ 101 (325)
T 2ho3_A 60 KSSFDLVYIASPNSLHF--AQAKA---ALSAGKHVILEKPAVSQPQE 101 (325)
T ss_dssp TSSCSEEEECSCGGGHH--HHHHH---HHHTTCEEEEESSCCSSHHH
T ss_pred CCCCCEEEEeCChHHHH--HHHHH---HHHcCCcEEEecCCcCCHHH
Confidence 6899999999976532 33222 233344 5554444555543
No 297
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.08 E-value=0.0015 Score=63.96 Aligned_cols=67 Identities=15% Similarity=0.104 Sum_probs=49.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
++|.|||+|.||.+++..|+..|. +|++++|+.++.+...+.+ + .....++. +.+
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~----------~-------------~~~~~~~~-~~~ 175 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY----------G-------------YAYINSLE-NQQ 175 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH----------T-------------CEEESCCT-TCC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------C-------------Cccchhhh-ccc
Confidence 579999999999999999999997 8999999988766532111 1 01111222 568
Q ss_pred CCEEEEecCCCh
Q 008509 227 VDMVIEAVIESV 238 (563)
Q Consensus 227 aDlVieav~e~~ 238 (563)
+|+||.|+|..+
T Consensus 176 ~DivInaTp~gm 187 (271)
T 1npy_A 176 ADILVNVTSIGM 187 (271)
T ss_dssp CSEEEECSSTTC
T ss_pred CCEEEECCCCCc
Confidence 999999998654
No 298
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.04 E-value=0.0011 Score=67.88 Aligned_cols=90 Identities=21% Similarity=0.201 Sum_probs=59.6
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee--ecCc-cc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG--VLDY-SE 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~--~~~~-~~ 223 (563)
-++|+|||+|.||..++..|++. ++|+++||++++++... +... . ..+.. ..++ +.
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la-----------~~~~--~-------~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVK-----------EFAT--P-------LKVDASNFDKLVEV 74 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHT-----------TTSE--E-------EECCTTCHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHH-----------hhCC--e-------EEEecCCHHHHHHH
Confidence 36899999999999999999998 99999999999876532 1110 0 00000 0112 35
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecC
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
++++|+||.|+|..... .+ +...+..++.+.+.+
T Consensus 75 l~~~DvVIn~~P~~~~~--~v---~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 75 MKEFELVIGALPGFLGF--KS---IKAAIKSKVDMVDVS 108 (365)
T ss_dssp HTTCSCEEECCCHHHHH--HH---HHHHHHTTCCEEECC
T ss_pred HhCCCEEEECCChhhhH--HH---HHHHHHhCCeEEEcc
Confidence 67999999999865432 23 233455667666533
No 299
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.04 E-value=0.0016 Score=65.58 Aligned_cols=96 Identities=15% Similarity=0.006 Sum_probs=59.8
Q ss_pred eeEEEEcCCcchH-HHHHHHHhC-CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc-
Q 008509 148 RKVAVIGGGLMGS-GIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF- 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~-~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l- 224 (563)
.||+|||+|.||. .++..+.+. +++|+++|+++++++...+ +.|. . ....++.+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~----------~~g~-~----------~~~~~~~~~l~ 61 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLAT----------RYRV-S----------ATCTDYRDVLQ 61 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHH----------HTTC-C----------CCCSSTTGGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH----------HcCC-C----------ccccCHHHHhh
Confidence 5899999999998 488888764 7888899999987665321 1111 0 0022334555
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
.++|+|+.|+|..... ++..+. +..+. +++....++++.+
T Consensus 62 ~~~D~V~i~tp~~~h~--~~~~~a---l~~Gk~V~~EKP~~~~~~~ 102 (323)
T 1xea_A 62 YGVDAVMIHAATDVHS--TLAAFF---LHLGIPTFVDKPLAASAQE 102 (323)
T ss_dssp GCCSEEEECSCGGGHH--HHHHHH---HHTTCCEEEESCSCSSHHH
T ss_pred cCCCEEEEECCchhHH--HHHHHH---HHCCCeEEEeCCCcCCHHH
Confidence 6899999999976532 333222 22333 5554444555543
No 300
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.03 E-value=0.0017 Score=67.15 Aligned_cols=85 Identities=21% Similarity=0.337 Sum_probs=59.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|+|+|.+|.++|..+...|.+|+++|+++.....+. ..| .. ..++ +.++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G-------------~~-v~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDG-------------FR-LVKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcC-------------CE-eccHHHHHhc
Confidence 6899999999999999999999999999999986543321 112 11 1233 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEec
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 261 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sn 261 (563)
||+||.| +++..+ +-.+..+.++++++|+..
T Consensus 276 ADIVi~a-tgt~~l---I~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 276 VDIVITC-TGNKNV---VTREHLDRMKNSCIVCNM 306 (435)
T ss_dssp CSEEEEC-SSCSCS---BCHHHHHHSCTTEEEEEC
T ss_pred CCEEEEC-CCCccc---CCHHHHHhcCCCcEEEEe
Confidence 9999997 443221 112344567899887644
No 301
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.03 E-value=0.0016 Score=67.46 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=60.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|+|||.|.+|.++|+.+...|.+|+++|+++.....+. ..| ... .++ +.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G-------------~~v-v~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDG-------------FEV-VTLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcC-------------cee-ccHHHHHhh
Confidence 6899999999999999999999999999999986533221 112 111 233 46789
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~ 264 (563)
||+|+.+....--+. ++..+.++++++|+ |++.
T Consensus 303 ADIVv~atgt~~lI~----~e~l~~MK~GAILI-NvGR 335 (464)
T 3n58_A 303 ADIVVTTTGNKDVIT----IDHMRKMKDMCIVG-NIGH 335 (464)
T ss_dssp CSEEEECCSSSSSBC----HHHHHHSCTTEEEE-ECSS
T ss_pred CCEEEECCCCccccC----HHHHhcCCCCeEEE-EcCC
Confidence 999999864321122 34445688999886 5554
No 302
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.02 E-value=0.0013 Score=64.98 Aligned_cols=41 Identities=15% Similarity=0.268 Sum_probs=36.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIK 188 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~ 188 (563)
+++.|+|+|.+|.+++..|+..|. +|++++|++++.+...+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~ 169 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD 169 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHH
Confidence 689999999999999999999999 79999999988776543
No 303
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.02 E-value=0.00059 Score=68.93 Aligned_cols=109 Identities=17% Similarity=0.085 Sum_probs=66.9
Q ss_pred eeEEEEc-CCcchHHHHHHHHhCCC--e-----EEEEeCCHH--HHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee
Q 008509 148 RKVAVIG-GGLMGSGIATAHILNNI--Y-----VVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217 (563)
Q Consensus 148 ~kv~ViG-aG~mG~~iA~~la~~G~--~-----V~l~d~~~~--~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 217 (563)
.||+|+| +|.+|+.+|..|+..|+ + ++++|+++. .++...-.+ ..... .....+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL--------~~~~~------~~~~~~~~ 69 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMEL--------QDCAL------PLLKDVIA 69 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH--------HHTCC------TTEEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhh--------Hhhhh------cccCCEEE
Confidence 6899999 69999999999999887 6 999999752 322211111 11100 01123444
Q ss_pred ecC-cccccCCCEEEEec--CC------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhh
Q 008509 218 VLD-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 272 (563)
Q Consensus 218 ~~~-~~~l~~aDlVieav--~e------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~ 272 (563)
+++ ++++++||+||.+. |. |..+.+++...+.++.+++.++...| .|++.+..
T Consensus 70 ~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvs--NPvd~~t~ 137 (333)
T 5mdh_A 70 TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG--NPANTNCL 137 (333)
T ss_dssp ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS--SSHHHHHH
T ss_pred cCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC--CchHHHHH
Confidence 444 57899999999875 21 23455566677888887775333222 35554443
No 304
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.99 E-value=0.0018 Score=63.54 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=35.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++|.|+|+|.||.+++..|+..|.+|++++|++++++..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~l 158 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEEL 158 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 579999999999999999999999999999999876553
No 305
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.96 E-value=0.0024 Score=64.46 Aligned_cols=96 Identities=9% Similarity=-0.028 Sum_probs=62.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++...+ +.|. ....+|++ .
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~----------~~~~------------~~~~~~~~~l 62 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAK----------ELAI------------PVAYGSYEEL 62 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHH----------HTTC------------CCCBSSHHHH
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHH----------HcCC------------CceeCCHHHH
Confidence 46899999999999999999885 77876 78999887665321 1111 12345664 3
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
+. ++|+|+.|+|..... ++.... +..+ .+++-..-+....+
T Consensus 63 l~~~~~D~V~i~tp~~~h~--~~~~~a---l~~gk~vl~EKP~~~~~~e 106 (330)
T 3e9m_A 63 CKDETIDIIYIPTYNQGHY--SAAKLA---LSQGKPVLLEKPFTLNAAE 106 (330)
T ss_dssp HHCTTCSEEEECCCGGGHH--HHHHHH---HHTTCCEEECSSCCSSHHH
T ss_pred hcCCCCCEEEEcCCCHHHH--HHHHHH---HHCCCeEEEeCCCCCCHHH
Confidence 44 799999999987643 332222 2223 35655554555554
No 306
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.95 E-value=0.0033 Score=64.05 Aligned_cols=96 Identities=20% Similarity=0.130 Sum_probs=62.8
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
..||+|||+|.||..++..+.+. |++|+ ++|+++++++...+. .| +...+|++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~----------~g-------------~~~~~~~~~~ 61 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKR----------YN-------------CAGDATMEAL 61 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHH----------HT-------------CCCCSSHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------cC-------------CCCcCCHHHH
Confidence 35899999999999999999887 88855 889999886653211 01 22245554 3
Q ss_pred c--cCCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHHH
Q 008509 224 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNIV 270 (563)
Q Consensus 224 l--~~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~l 270 (563)
+ .++|+|+.|+|..... ++.... +..+ .+++-...+..+.+.
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~a---l~~gk~vl~EKP~~~~~~~~ 106 (354)
T 3db2_A 62 LAREDVEMVIITVPNDKHA--EVIEQC---ARSGKHIYVEKPISVSLDHA 106 (354)
T ss_dssp HHCSSCCEEEECSCTTSHH--HHHHHH---HHTTCEEEEESSSCSSHHHH
T ss_pred hcCCCCCEEEEeCChHHHH--HHHHHH---HHcCCEEEEccCCCCCHHHH
Confidence 4 5799999999987653 222222 2233 356655555555543
No 307
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.94 E-value=0.0031 Score=63.96 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=60.8
Q ss_pred cceeEEEEcCCcchHHHHHHHH-h-CCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHI-L-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la-~-~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
+..+|+|||+|.||..++..+. . .|++| .++|+++++++...+ +.|. ....+|++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~----------~~g~------------~~~~~~~~ 64 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN----------ELGV------------ETTYTNYK 64 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH----------TTCC------------SEEESCHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH----------HhCC------------CcccCCHH
Confidence 3468999999999999999988 5 47774 588999987654321 1121 12345664
Q ss_pred -ccc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 223 -EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 223 -~l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
.+. ++|+|+.|+|..... ++..+ .+..+. +++....+.+..+
T Consensus 65 ~~l~~~~~D~V~i~tp~~~h~--~~~~~---al~~G~~v~~eKp~~~~~~~ 110 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPFHP--EMTIY---AMNAGLNVFCEKPLGLDFNE 110 (346)
T ss_dssp HHHTTSCCSEEEECSCGGGHH--HHHHH---HHHTTCEEEECSCCCSCHHH
T ss_pred HHhcCCCCCEEEEeCChHhHH--HHHHH---HHHCCCEEEEcCCCCCCHHH
Confidence 343 699999999976543 22222 233444 4444344555554
No 308
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.94 E-value=0.0033 Score=63.35 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=62.5
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+ +.| +. .++++ .
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~----------~~~-------------~~-~~~~~~~ 58 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAG----------AYG-------------CE-VRTIDAI 58 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------HTT-------------CE-ECCHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHH----------HhC-------------CC-cCCHHHH
Confidence 46899999999999999999885 78876 79999987665321 111 23 45554 3
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 270 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~l 270 (563)
++ ++|+|+.|+|..... ++.....+. ...+++-...+..+.+.
T Consensus 59 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~~ 103 (331)
T 4hkt_A 59 EAAADIDAVVICTPTDTHA--DLIERFARA--GKAIFCEKPIDLDAERV 103 (331)
T ss_dssp HHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEECSCSCSSHHHH
T ss_pred hcCCCCCEEEEeCCchhHH--HHHHHHHHc--CCcEEEecCCCCCHHHH
Confidence 44 799999999987643 333332221 23355554445555543
No 309
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.91 E-value=0.0024 Score=65.21 Aligned_cols=38 Identities=18% Similarity=0.191 Sum_probs=35.2
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
++|+|+|+|.||..+|..|...|.+|+++|++++++++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~ 211 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSA 211 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 67999999999999999999999999999999887654
No 310
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.84 E-value=0.0019 Score=67.15 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=49.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
++|+|||+|.||..+++.+...|. +|+++|+++++++.... +-|. ......++ +.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~----------~~g~-----------~~~~~~~l~~~l~ 226 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR----------DLGG-----------EAVRFDELVDHLA 226 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----------HHTC-----------EECCGGGHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----------HcCC-----------ceecHHhHHHHhc
Confidence 689999999999999999999999 99999999987643211 0111 00001222 3457
Q ss_pred CCCEEEEecCCCh
Q 008509 226 DVDMVIEAVIESV 238 (563)
Q Consensus 226 ~aDlVieav~e~~ 238 (563)
++|+||+|++...
T Consensus 227 ~aDvVi~at~~~~ 239 (404)
T 1gpj_A 227 RSDVVVSATAAPH 239 (404)
T ss_dssp TCSEEEECCSSSS
T ss_pred CCCEEEEccCCCC
Confidence 8999999997654
No 311
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.84 E-value=0.0037 Score=63.44 Aligned_cols=95 Identities=16% Similarity=0.196 Sum_probs=61.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cc
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 224 (563)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .| .....+|++ .+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------~~------------~~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEK----------LG------------VEKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHH----------HT------------CSEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------hC------------CCceeCCHHHHh
Confidence 5899999999999999998875 77776 789999876653211 01 112455664 34
Q ss_pred c--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 225 K--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 225 ~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
. ++|+|+.|+|..... ++.... +..+ .+++-...++++.+
T Consensus 61 ~~~~~D~V~i~tp~~~h~--~~~~~a---l~~gk~v~~EKP~~~~~~e 103 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTHS--ELVIAC---AKAKKHVFCEKPLSLNLAD 103 (344)
T ss_dssp HCTTCCEEEECSCGGGHH--HHHHHH---HHTTCEEEEESCSCSCHHH
T ss_pred cCCCCCEEEEcCCCcchH--HHHHHH---HhcCCeEEEECCCCCCHHH
Confidence 4 799999999977543 222222 2233 35555444555554
No 312
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.83 E-value=0.002 Score=64.50 Aligned_cols=93 Identities=20% Similarity=0.123 Sum_probs=60.6
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
..||+|||+|.||..++..+.+. ++++ .++|+++++++... + .+...++++ .
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~-----------~--------------~~~~~~~~~~~ 64 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVP-----------P--------------GCVIESDWRSV 64 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCC-----------T--------------TCEEESSTHHH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHH-----------h--------------hCcccCCHHHH
Confidence 46899999999999999999886 6775 59999987644310 0 123455664 3
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
++ ++|+|+.|+|..... ++..+ .+..+. +++....++++.+
T Consensus 65 l~~~~~D~V~i~tp~~~h~--~~~~~---al~~Gk~v~~eKP~~~~~~~ 108 (315)
T 3c1a_A 65 VSAPEVEAVIIATPPATHA--EITLA---AIASGKAVLVEKPLTLDLAE 108 (315)
T ss_dssp HTCTTCCEEEEESCGGGHH--HHHHH---HHHTTCEEEEESSSCSCHHH
T ss_pred hhCCCCCEEEEeCChHHHH--HHHHH---HHHCCCcEEEcCCCcCCHHH
Confidence 43 799999999976532 33332 233443 5555455555543
No 313
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.83 E-value=0.0025 Score=62.47 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=35.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~ 186 (563)
+++.|+|+|.+|.+++..|+..|. +|++++|++++++..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~l 160 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALAL 160 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999996 999999999886654
No 314
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.81 E-value=0.00095 Score=64.62 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=31.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~ 180 (563)
++|.|||+|.+|+.+|..|+..|+ +|+++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999987
No 315
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.78 E-value=0.0075 Score=62.75 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=59.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeee-cCc-----
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDY----- 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~----- 221 (563)
++|.|+|.|.+|..++..|...|++|+++|.|++.++.+. +.|.. -+.+. ++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-----------~~g~~----------vi~GDat~~~~L~~ 63 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-----------KFGMK----------VFYGDATRMDLLES 63 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-----------HTTCC----------CEESCTTCHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-----------hCCCe----------EEEcCCCCHHHHHh
Confidence 5799999999999999999999999999999999877643 12210 11111 111
Q ss_pred ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEe
Q 008509 222 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 260 (563)
Q Consensus 222 ~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~s 260 (563)
..+.+||+||.+++.+. ....+...+....+.-.|++-
T Consensus 64 agi~~A~~viv~~~~~~-~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 64 AGAAKAEVLINAIDDPQ-TNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp TTTTTCSEEEECCSSHH-HHHHHHHHHHHHCTTCEEEEE
T ss_pred cCCCccCEEEECCCChH-HHHHHHHHHHHhCCCCeEEEE
Confidence 23688999999998643 333333333433333355553
No 316
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.75 E-value=0.00031 Score=69.10 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=34.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLL 184 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~ 184 (563)
++|.|||+|.||.+++..|+..|. +|++++|++++.+
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~ 155 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFN 155 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence 679999999999999999999999 9999999987644
No 317
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.73 E-value=0.0061 Score=62.01 Aligned_cols=97 Identities=18% Similarity=0.068 Sum_probs=61.6
Q ss_pred ccceeEEEEcCCcchH-HHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 145 RGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~-~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
++..||+|||+|.||. .++..+.+. |++|+ ++|+++++++...+. .| +...+++
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------~g-------------~~~~~~~ 81 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTER----------FG-------------GEPVEGY 81 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHH----------HC-------------SEEEESH
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHH----------cC-------------CCCcCCH
Confidence 3446899999999998 788888877 78876 889999876653211 01 2334666
Q ss_pred c-ccc--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 222 S-EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 222 ~-~l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
+ .++ ++|+|+.|+|..... ++.... +..+ .+++--.-+..+.+
T Consensus 82 ~~ll~~~~~D~V~i~tp~~~h~--~~~~~a---l~aGk~Vl~EKP~a~~~~e 128 (350)
T 3rc1_A 82 PALLERDDVDAVYVPLPAVLHA--EWIDRA---LRAGKHVLAEKPLTTDRPQ 128 (350)
T ss_dssp HHHHTCTTCSEEEECCCGGGHH--HHHHHH---HHTTCEEEEESSSCSSHHH
T ss_pred HHHhcCCCCCEEEECCCcHHHH--HHHHHH---HHCCCcEEEeCCCCCCHHH
Confidence 4 333 689999999987643 333332 2233 35554444455543
No 318
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.72 E-value=0.0035 Score=63.09 Aligned_cols=94 Identities=17% Similarity=0.071 Sum_probs=58.7
Q ss_pred eEEEEcCCcchHHH-HHHHHhCCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-ccc
Q 008509 149 KVAVIGGGLMGSGI-ATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFK 225 (563)
Q Consensus 149 kv~ViGaG~mG~~i-A~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l~ 225 (563)
||+|||+|.||..+ +..+.+.|++|+ ++|+++++.+...+ +.|. ....+|++ .++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~----------~~g~------------~~~~~~~~~~l~ 59 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYAT----------ENGI------------GKSVTSVEELVG 59 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHH----------HTTC------------SCCBSCHHHHHT
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHH----------HcCC------------CcccCCHHHHhc
Confidence 79999999999998 777777888865 88999987654321 1121 11234554 343
Q ss_pred --CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 226 --DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 226 --~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
++|+|+.|+|..... ++..+ .+..+. +++....+.+..+
T Consensus 60 ~~~~D~V~i~tp~~~h~--~~~~~---al~~Gk~v~~ekP~~~~~~~ 101 (332)
T 2glx_A 60 DPDVDAVYVSTTNELHR--EQTLA---AIRAGKHVLCEKPLAMTLED 101 (332)
T ss_dssp CTTCCEEEECSCGGGHH--HHHHH---HHHTTCEEEECSSSCSSHHH
T ss_pred CCCCCEEEEeCChhHhH--HHHHH---HHHCCCeEEEeCCCcCCHHH
Confidence 599999999976532 33222 233444 4544334455544
No 319
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.69 E-value=0.0078 Score=62.78 Aligned_cols=152 Identities=17% Similarity=0.159 Sum_probs=82.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCe-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCC----CHHHHHhh--hcCeeeec
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKL----TQDKANNA--LKMLKGVL 219 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~----~~~~~~~~--~~~i~~~~ 219 (563)
-||+|||+|.||..++..+.+. |.+ |.++|+++++++...+.. +. ....+ +..+.... ......++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~---yG---~~~~~~~~~~~~~i~~a~~~g~~~v~~ 97 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTA---YG---DEENAREATTESAMTRAIEAGKIAVTD 97 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHH---HS---SSTTEEECSSHHHHHHHHHTTCEEEES
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh---cC---CccccccccchhhhhhhhccCCceEEC
Confidence 5799999999999999887654 666 457899998876643211 00 00000 11111111 12355677
Q ss_pred Cccc-cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHH---HHhhhccCCCceeecccCCCCCCC
Q 008509 220 DYSE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVM 292 (563)
Q Consensus 220 ~~~~-l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~---~la~~~~~~~r~ig~hf~~P~~~~ 292 (563)
|+++ +. +.|+|++|+|.. +.- ..-....+..+. +++.|. .+... +|.+..+.. |..+
T Consensus 98 D~eeLL~d~dIDaVviaTp~p-~~H---~e~a~~AL~AGKHVv~~nk-~l~~~eg~eL~~~A~e~----Gvvl------- 161 (446)
T 3upl_A 98 DNDLILSNPLIDVIIDATGIP-EVG---AETGIAAIRNGKHLVMMNV-EADVTIGPYLKAQADKQ----GVIY------- 161 (446)
T ss_dssp CHHHHHTCTTCCEEEECSCCH-HHH---HHHHHHHHHTTCEEEECCH-HHHHHHHHHHHHHHHHH----TCCE-------
T ss_pred CHHHHhcCCCCCEEEEcCCCh-HHH---HHHHHHHHHcCCcEEecCc-ccCHHHHHHHHHHHHHh----CCee-------
Confidence 8853 43 689999999753 111 112223333444 343332 22222 222222111 2111
Q ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEec
Q 008509 293 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326 (563)
Q Consensus 293 ~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~ 326 (563)
.......+.....+.++.+.+|..++.++
T Consensus 162 -----~~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 162 -----SLGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp -----EECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred -----eecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 11222346777788889999999999984
No 320
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.69 E-value=0.0043 Score=65.29 Aligned_cols=86 Identities=20% Similarity=0.254 Sum_probs=60.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-ccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 226 (563)
++|.|+|+|.+|.++|..|+..|.+|+++|+++...+.+. ..| .. ..+. +.+..
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-----------~~g-------------~d-v~~lee~~~~ 320 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQAT-----------MEG-------------LQ-VLTLEDVVSE 320 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CE-ECCGGGTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-----------HhC-------------Cc-cCCHHHHHHh
Confidence 6799999999999999999999999999999988755432 112 11 2233 46678
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
+|+|+++....--+.. +....++++.+|+...
T Consensus 321 aDvVi~atG~~~vl~~----e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 321 ADIFVTTTGNKDIIML----DHMKKMKNNAIVCNIG 352 (488)
T ss_dssp CSEEEECSSCSCSBCH----HHHTTSCTTEEEEESS
T ss_pred cCEEEeCCCChhhhhH----HHHHhcCCCeEEEEcC
Confidence 9999988643222222 2345578888876544
No 321
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.69 E-value=0.0041 Score=61.43 Aligned_cols=76 Identities=16% Similarity=0.154 Sum_probs=50.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
++|.|+|+|.||.++|..|++.| +|++++|+.++++...+.+.... ... . .. .+..++-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~----~~~---~-~~-----~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL----NKK---F-GE-----EVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH----TCC---H-HH-----HEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc----ccc---c-ce-----eEEEeeHHHhhCCC
Confidence 57999999999999999999999 99999999987765443322110 000 0 00 01111113567889
Q ss_pred CEEEEecCCC
Q 008509 228 DMVIEAVIES 237 (563)
Q Consensus 228 DlVieav~e~ 237 (563)
|+||.+++..
T Consensus 195 DilVn~ag~~ 204 (287)
T 1nvt_A 195 DIIINATPIG 204 (287)
T ss_dssp CEEEECSCTT
T ss_pred CEEEECCCCC
Confidence 9999988744
No 322
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.66 E-value=0.0015 Score=64.25 Aligned_cols=38 Identities=16% Similarity=0.056 Sum_probs=35.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~ 185 (563)
+++.|||+|.+|.+++..|+..|. +|++++|++++++.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~ 161 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSE 161 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 689999999999999999999998 99999999987654
No 323
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.65 E-value=0.00096 Score=62.85 Aligned_cols=38 Identities=24% Similarity=0.240 Sum_probs=34.2
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
+||.|+|+ |.+|+.++..|++.|++|++++|+++.++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 36999998 999999999999999999999999887543
No 324
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.65 E-value=0.0054 Score=59.89 Aligned_cols=72 Identities=24% Similarity=0.254 Sum_probs=53.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+++.|||+|-.+++++..|+..|. +|++++|+.++.+...+.+... ...+......+.+++
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~------------------~~~~~~~~~~~~~~~ 187 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNG------------------FPGLTVSTQFSGLED 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHH------------------CTTCEEESCCSCSTT
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhcc------------------CCcceehhhhhhhhc
Confidence 679999999999999999999996 8999999999876643322111 112233444567788
Q ss_pred CCEEEEecCCC
Q 008509 227 VDMVIEAVIES 237 (563)
Q Consensus 227 aDlVieav~e~ 237 (563)
+|+||.|.|--
T Consensus 188 ~dliiNaTp~G 198 (269)
T 3tum_A 188 FDLVANASPVG 198 (269)
T ss_dssp CSEEEECSSTT
T ss_pred ccccccCCccc
Confidence 99999998744
No 325
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.64 E-value=0.0017 Score=66.41 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=60.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCc-cccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~-~~l~ 225 (563)
++|.|+|+|.+|..+++.+...|.+|+++|+++++++.+.+. . .. .+ ..+.. ..++ +.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~----~----~~-~~---------~~~~~~~~~~~~~~~ 229 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL----F----GS-RV---------ELLYSNSAEIETAVA 229 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----H----GG-GS---------EEEECCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh----h----Cc-ee---------EeeeCCHHHHHHHHc
Confidence 789999999999999999999999999999999887664321 1 00 00 00000 0112 3456
Q ss_pred CCCEEEEecCCChHH-HHHHHHHHHhhCCCCeEEEecC
Q 008509 226 DVDMVIEAVIESVPL-KQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 226 ~aDlVieav~e~~~~-k~~v~~~l~~~~~~~~ii~snt 262 (563)
++|+||+|++-.... ..-+..+..+.++++.++++..
T Consensus 230 ~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 230 EADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp TCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 899999999643210 0001223344567777666543
No 326
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.61 E-value=0.0062 Score=64.38 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=36.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
+||.|+|+|.+|..+|..|...|++|+++|.|++.++..
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~ 42 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLREL 42 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 689999999999999999999999999999999988764
No 327
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.59 E-value=0.0084 Score=52.66 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=62.2
Q ss_pred eeEEEEcC----CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 148 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 148 ~kv~ViGa----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
++|+|||+ |.||..++..|.+.|++ +|++|+.. +. ...+....++++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~--------------------------i~G~~~y~sl~~ 73 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EE--------------------------VLGRKCYPSVLD 73 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SE--------------------------ETTEECBSSGGG
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-Ce--------------------------ECCeeccCCHHH
Confidence 57999999 79999999999999997 56666542 00 012334445554
Q ss_pred c-cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhcc-CCCceee
Q 008509 224 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 282 (563)
Q Consensus 224 l-~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~-~~~r~ig 282 (563)
+ ..+|++|.++|. +.-.+++.++.+.- ...++.. ++..-.++.+... +.-+++|
T Consensus 74 l~~~vDlvvi~vp~--~~~~~vv~~~~~~g-i~~i~~~--~g~~~~~l~~~a~~~Gi~vvG 129 (144)
T 2d59_A 74 IPDKIEVVDLFVKP--KLTMEYVEQAIKKG-AKVVWFQ--YNTYNREASKKADEAGLIIVA 129 (144)
T ss_dssp CSSCCSEEEECSCH--HHHHHHHHHHHHHT-CSEEEEC--TTCCCHHHHHHHHHTTCEEEE
T ss_pred cCCCCCEEEEEeCH--HHHHHHHHHHHHcC-CCEEEEC--CCchHHHHHHHHHHcCCEEEc
Confidence 4 468999999986 34456666655532 2355433 3333445544432 2334554
No 328
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.58 E-value=0.0023 Score=65.54 Aligned_cols=68 Identities=29% Similarity=0.311 Sum_probs=48.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCc----c
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDY----S 222 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~----~ 222 (563)
+||.|||+|.+|+.+|..|++ .++|++.|++.++++++.+ ..+ .+.. .+|. +
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------------~~~---------~~~~d~~d~~~l~~ 73 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------------FAT---------PLKVDASNFDKLVE 73 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------------TSE---------EEECCTTCHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------------cCC---------cEEEecCCHHHHHH
Confidence 579999999999999998865 5899999999988766421 000 1111 1122 3
Q ss_pred cccCCCEEEEecCCCh
Q 008509 223 EFKDVDMVIEAVIESV 238 (563)
Q Consensus 223 ~l~~aDlVieav~e~~ 238 (563)
.++++|+||.|+|...
T Consensus 74 ~~~~~DvVi~~~p~~~ 89 (365)
T 3abi_A 74 VMKEFELVIGALPGFL 89 (365)
T ss_dssp HHTTCSEEEECCCGGG
T ss_pred HHhCCCEEEEecCCcc
Confidence 5689999999998764
No 329
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.56 E-value=0.003 Score=55.28 Aligned_cols=103 Identities=11% Similarity=0.041 Sum_probs=62.4
Q ss_pred eeEEEEcC----CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 148 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 148 ~kv~ViGa----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
++|+|||+ |.||..++..|.+.||+ +|++|+..... . ...+....++++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~----------------~---------i~G~~~~~sl~e 66 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE----------------E---------LFGEEAVASLLD 66 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS----------------E---------ETTEECBSSGGG
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC----------------c---------CCCEEecCCHHH
Confidence 57999999 89999999999999997 66777652100 0 012334445554
Q ss_pred c-cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhcc-CCCceee
Q 008509 224 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 282 (563)
Q Consensus 224 l-~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~-~~~r~ig 282 (563)
+ ...|++|.++|. +.-.+++.++.+.-- ..++.. +++. -.++.+... +.-|++|
T Consensus 67 l~~~vDlavi~vp~--~~~~~v~~~~~~~gi-~~i~~~-~g~~-~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 67 LKEPVDILDVFRPP--SALMDHLPEVLALRP-GLVWLQ-SGIR-HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp CCSCCSEEEECSCH--HHHTTTHHHHHHHCC-SCEEEC-TTCC-CHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEEeCH--HHHHHHHHHHHHcCC-CEEEEc-CCcC-HHHHHHHHHHcCCEEEc
Confidence 4 468999999986 334566666555433 345432 3333 344444432 3334554
No 330
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.56 E-value=0.0052 Score=62.70 Aligned_cols=113 Identities=14% Similarity=0.131 Sum_probs=65.5
Q ss_pred ceeEEEEc-CCcchHHHHHHHHhCCC-----eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeee-c
Q 008509 147 VRKVAVIG-GGLMGSGIATAHILNNI-----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-L 219 (563)
Q Consensus 147 ~~kv~ViG-aG~mG~~iA~~la~~G~-----~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~ 219 (563)
..||+|+| +|.+|.+++..++..+. +|.++|.+.+..+...+...--+ ..+.. ..+..+..+ .
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL----~h~~~------p~~~~v~i~~~ 101 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMEL----EDSLY------PLLREVSIGID 101 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH----HTTTC------TTEEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhH----Hhhhh------hhcCCcEEecC
Confidence 46899999 69999999999999875 38887765443222111111111 11110 011223333 4
Q ss_pred CcccccCCCEEEEec--CC------------ChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHh
Q 008509 220 DYSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 271 (563)
Q Consensus 220 ~~~~l~~aDlVieav--~e------------~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la 271 (563)
+++++++||+||.+. |- |..+.+.+...+.++..+++++...| .|++.+.
T Consensus 102 ~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs--NPvD~~t 165 (375)
T 7mdh_A 102 PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG--NPCNTNA 165 (375)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS--SSHHHHH
T ss_pred CHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEec--CchhHHH
Confidence 578999999999864 21 12333444455677766777665543 3555443
No 331
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.51 E-value=0.0054 Score=61.28 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=34.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCC---HHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~---~~~~~~~ 186 (563)
+++.|+|+|-+|.+++..|+..|. +|++++|+ .++++..
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~l 197 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKT 197 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHH
Confidence 689999999999999999999999 89999999 6665554
No 332
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.50 E-value=0.012 Score=59.44 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=61.5
Q ss_pred eeEEEEcCCcchHHHHHHHH-h-CCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc-
Q 008509 148 RKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la-~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 223 (563)
.||+|||+|.||..++..+. . .+++|+ ++|+++++++...+ +-|. .....+|+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~----------~~g~-----------~~~~~~~~~~l 61 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVE----------QYQL-----------NATVYPNDDSL 61 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHH----------HTTC-----------CCEEESSHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH----------HhCC-----------CCeeeCCHHHH
Confidence 58999999999999999998 4 478866 88999987665321 1110 1345567653
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
++ ++|+|+.|+|..... ++... .+..+ .+++-..-+..+.+
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~---al~~Gk~vl~EKP~a~~~~e 105 (344)
T 3mz0_A 62 LADENVDAVLVTSWGPAHE--SSVLK---AIKAQKYVFCEKPLATTAEG 105 (344)
T ss_dssp HHCTTCCEEEECSCGGGHH--HHHHH---HHHTTCEEEECSCSCSSHHH
T ss_pred hcCCCCCEEEECCCchhHH--HHHHH---HHHCCCcEEEcCCCCCCHHH
Confidence 33 599999999977543 23222 23333 35554444555554
No 333
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.50 E-value=0.008 Score=58.76 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=35.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
+++|.|+|+|.+|+.++..|++.|++|++.+|+++..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEA 43 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhh
Confidence 478999999999999999999999999999999876543
No 334
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.47 E-value=0.013 Score=59.58 Aligned_cols=98 Identities=14% Similarity=0.186 Sum_probs=62.6
Q ss_pred cceeEEEEcCCcchHHHHHHHH-h-CCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 146 GVRKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la-~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
+..||+|||+|.||...+..+. . .|++|+ ++|+++++++...+. .|. .....+|++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~g~-----------~~~~~~~~~ 80 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK----------YAI-----------EAKDYNDYH 80 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH----------HTC-----------CCEEESSHH
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH----------hCC-----------CCeeeCCHH
Confidence 3468999999999999999998 4 478866 899999886653211 010 133456664
Q ss_pred c-cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 223 E-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 223 ~-l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
+ +. ++|+|+.|+|..... ++.... +..+ .+++-..-+..+.+
T Consensus 81 ~ll~~~~~D~V~i~tp~~~h~--~~~~~a---l~aGk~Vl~EKPla~~~~e 126 (357)
T 3ec7_A 81 DLINDKDVEVVIITASNEAHA--DVAVAA---LNANKYVFCEKPLAVTAAD 126 (357)
T ss_dssp HHHHCTTCCEEEECSCGGGHH--HHHHHH---HHTTCEEEEESSSCSSHHH
T ss_pred HHhcCCCCCEEEEcCCcHHHH--HHHHHH---HHCCCCEEeecCccCCHHH
Confidence 3 33 689999999977543 333332 2233 35554444555554
No 335
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.47 E-value=0.005 Score=61.42 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=34.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCC---HHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~---~~~~~~~ 186 (563)
+++.|+|+|-+|.+++..|+..|. +|++++|+ .++++..
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~l 191 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAF 191 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHH
Confidence 689999999999999999999998 89999999 6655543
No 336
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.45 E-value=0.011 Score=55.36 Aligned_cols=39 Identities=8% Similarity=0.251 Sum_probs=33.9
Q ss_pred ceeEEEEcC-CcchHHHHHHHH-hCCCeEEEEeCCHH-HHHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHI-LNNIYVVLKEVNSE-YLLK 185 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la-~~G~~V~l~d~~~~-~~~~ 185 (563)
+++|.|+|+ |.+|..++..|+ +.|++|++.+|+++ .++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~ 46 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP 46 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh
Confidence 455999996 999999999999 89999999999987 5443
No 337
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.41 E-value=0.011 Score=58.99 Aligned_cols=68 Identities=15% Similarity=0.118 Sum_probs=44.6
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++. .|. ......++...
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g~-----------~~~~~~~l~~~ 63 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------ELQ-----------PFRVVSDIEQL 63 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CCT-----------TSCEESSGGGS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cCC-----------CcCCHHHHHhC
Confidence 35899999999999999998874 78887 79999875321 121 01123344444
Q ss_pred cCCCEEEEecCCChH
Q 008509 225 KDVDMVIEAVIESVP 239 (563)
Q Consensus 225 ~~aDlVieav~e~~~ 239 (563)
.++|+||.|+|....
T Consensus 64 ~~~DvViiatp~~~h 78 (304)
T 3bio_A 64 ESVDVALVCSPSREV 78 (304)
T ss_dssp SSCCEEEECSCHHHH
T ss_pred CCCCEEEECCCchhh
Confidence 789999999986543
No 338
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.39 E-value=0.0021 Score=66.66 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=35.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
.+|+|||+|.+|..+++.+...|.+|+++|++++.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999999876653
No 339
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.38 E-value=0.014 Score=59.42 Aligned_cols=94 Identities=19% Similarity=0.155 Sum_probs=60.4
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
..||+|||+|.||...+..+... +++|+ ++|+++++.+.+. +.| +...+|++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-----------~~g-------------~~~~~~~~~l 60 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-----------QKG-------------LKIYESYEAV 60 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-----------TTT-------------CCBCSCHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------hcC-------------CceeCCHHHH
Confidence 35899999999999999988876 77875 7799988754321 112 23345664 3
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
+. ++|+|+.|+|..... ++..+. +..+ .+++-..-+..+.+
T Consensus 61 l~~~~~D~V~i~tp~~~h~--~~~~~a---l~aGkhVl~EKP~a~~~~e 104 (359)
T 3e18_A 61 LADEKVDAVLIATPNDSHK--ELAISA---LEAGKHVVCEKPVTMTSED 104 (359)
T ss_dssp HHCTTCCEEEECSCGGGHH--HHHHHH---HHTTCEEEEESSCCSSHHH
T ss_pred hcCCCCCEEEEcCCcHHHH--HHHHHH---HHCCCCEEeeCCCcCCHHH
Confidence 33 799999999987543 332222 2233 35555444455543
No 340
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.34 E-value=0.0028 Score=59.36 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=33.6
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLL 184 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~ 184 (563)
+||.|+|+ |.+|+.++..|++.|++|++++|+++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 38 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKIT 38 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhh
Confidence 47999996 99999999999999999999999987654
No 341
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.31 E-value=0.004 Score=62.57 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=58.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc-
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF- 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l- 224 (563)
.||+|||+|.||..++..+.+. ++++ .++|++++. . +. . .+..++|++++
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~-----------------~~-------~-gv~~~~d~~~ll 56 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--D-----------------TK-------T-PVFDVADVDKHA 56 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--S-----------------SS-------S-CEEEGGGGGGTT
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--h-----------------hc-------C-CCceeCCHHHHh
Confidence 5899999999999999998877 5664 588988653 1 00 0 13345566544
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHHH
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 270 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~l 270 (563)
.++|+||+|+|..... ..+...+..+. +|++.+.++++.++
T Consensus 57 ~~~DvViiatp~~~h~-----~~~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 57 DDVDVLFLCMGSATDI-----PEQAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TTCSEEEECSCTTTHH-----HHHHHHHTTTSEEECCCCCGGGHHHH
T ss_pred cCCCEEEEcCCcHHHH-----HHHHHHHHCCCEEEECCCCcCCHHHH
Confidence 7899999999987532 22233344444 45444444555544
No 342
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.29 E-value=0.0054 Score=63.72 Aligned_cols=41 Identities=22% Similarity=0.191 Sum_probs=35.9
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCC---CeEEEEeCCHHHHHHHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~ 187 (563)
|+||+|+|+|.+|..++..|++.| .+|++.|++.++++...
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la 44 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIA 44 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHH
Confidence 368999999999999999999998 39999999999877643
No 343
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.21 E-value=0.0024 Score=62.48 Aligned_cols=101 Identities=18% Similarity=0.171 Sum_probs=57.0
Q ss_pred cceeEEEEc-CCcchHHHHHHHHhC-CCeEEE-EeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 146 GVRKVAVIG-GGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 146 ~~~kv~ViG-aG~mG~~iA~~la~~-G~~V~l-~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
++.||+|+| .|.||..++..+... +++++. +|++.+... + ...+.+. .....+..++|++
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~-G-----------~d~gel~-----g~~~gv~v~~dl~ 68 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQL-G-----------QDAGAFL-----GKQTGVALTDDIE 68 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTT-T-----------SBTTTTT-----TCCCSCBCBCCHH
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccc-c-----------ccHHHHh-----CCCCCceecCCHH
Confidence 467999999 799999999988765 777765 688743210 0 0001000 0001233455664
Q ss_pred -cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHH
Q 008509 223 -EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 268 (563)
Q Consensus 223 -~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~ 268 (563)
.+.++|+||++.+.. . .+.-+...+..+.-+++.|++++..
T Consensus 69 ~ll~~~DVVIDfT~p~--a---~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 69 RVCAEADYLIDFTLPE--G---TLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHHCSEEEECSCHH--H---HHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HHhcCCCEEEEcCCHH--H---HHHHHHHHHHcCCCEEEECCCCCHH
Confidence 467899999987532 2 2223333334454455555555443
No 344
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.20 E-value=0.021 Score=58.21 Aligned_cols=99 Identities=14% Similarity=0.113 Sum_probs=61.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc-
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 223 (563)
..||+|||+|.||..++..+... ++++ .++|+++++.+...+ +.| +. ......+++++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~----------~~~-~~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFAT----------ANN-YP--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------HTT-CC--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH----------HhC-CC--------CCCeeeCCHHHH
Confidence 46899999999999999988875 6776 588999887654321 111 10 01234566653
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
+. ++|+|+.|+|..... ++.. ..+..+. +++-...+++..+
T Consensus 67 l~~~~~D~V~i~tp~~~h~--~~~~---~al~aGk~V~~EKP~a~~~~e 110 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSLHV--EWAI---KAAEKGKHILLEKPVAMNVTE 110 (362)
T ss_dssp HHCTTCCEEEECCCGGGHH--HHHH---HHHTTTCEEEECSSCSSSHHH
T ss_pred hcCCCCCEEEEcCChHHHH--HHHH---HHHHCCCeEEEecCCcCCHHH
Confidence 43 699999999976532 2222 3344554 4443334455543
No 345
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.13 E-value=0.011 Score=60.30 Aligned_cols=96 Identities=13% Similarity=0.088 Sum_probs=59.8
Q ss_pred ceeEEEEcCCcchHH-HHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 147 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
..||+|||+|.||.. ++..+... +++|+ ++|+++++++... ++ .......+|+++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a-----------~~-----------~~~~~~~~~~~~ 62 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVH-----------RF-----------ISDIPVLDNVPA 62 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGG-----------GT-----------SCSCCEESSHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------Hh-----------cCCCcccCCHHH
Confidence 358999999999985 88888775 78876 8899998765421 11 112334567753
Q ss_pred -cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 224 -FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 224 -l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
+. +.|+|+.|+|..... ++..+ .+..+. +++-..-+.++.+
T Consensus 63 ll~~~~vD~V~i~tp~~~H~--~~~~~---al~aGkhVl~EKPla~~~~e 107 (359)
T 3m2t_A 63 MLNQVPLDAVVMAGPPQLHF--EMGLL---AMSKGVNVFVEKPPCATLEE 107 (359)
T ss_dssp HHHHSCCSEEEECSCHHHHH--HHHHH---HHHTTCEEEECSCSCSSHHH
T ss_pred HhcCCCCCEEEEcCCcHHHH--HHHHH---HHHCCCeEEEECCCcCCHHH
Confidence 43 569999999965432 33332 223333 5554444455443
No 346
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.09 E-value=0.0042 Score=64.10 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=35.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
.+|+|+|+|.+|..+++.+...|.+|+++|+++++.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999999999999998776553
No 347
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.03 E-value=0.0086 Score=63.08 Aligned_cols=39 Identities=18% Similarity=0.160 Sum_probs=35.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
.++|.|+|+|.||..++..|+..|++|+++|+++++++.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~ 41 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKK 41 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHH
Confidence 468999999999999999999999999999999877554
No 348
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.03 E-value=0.023 Score=53.93 Aligned_cols=92 Identities=13% Similarity=-0.001 Sum_probs=59.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-ecCc----
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDY---- 221 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~---- 221 (563)
-++|.|+|+|.+|..++..|...|+ |+++|++++.++... .|. ..+.+ .++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------------~~~----------~~i~gd~~~~~~l~ 65 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR------------SGA----------NFVHGDPTRVSDLE 65 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------------TTC----------EEEESCTTCHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------------cCC----------eEEEcCCCCHHHHH
Confidence 3689999999999999999999999 999999998765421 110 00111 0111
Q ss_pred -ccccCCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCC
Q 008509 222 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTS 263 (563)
Q Consensus 222 -~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS 263 (563)
..+.+||.||.+++.+. .. .....+.+.+.++ .|++-..+
T Consensus 66 ~a~i~~ad~vi~~~~~d~-~n-~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 66 KANVRGARAVIVDLESDS-ET-IHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp HTTCTTCSEEEECCSCHH-HH-HHHHHHHHHHCSSSEEEEECSS
T ss_pred hcCcchhcEEEEcCCCcH-HH-HHHHHHHHHHCCCCeEEEEECC
Confidence 23789999999998653 22 2223334445555 66665443
No 349
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.01 E-value=0.0076 Score=60.65 Aligned_cols=97 Identities=13% Similarity=0.069 Sum_probs=59.4
Q ss_pred cceeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 222 (563)
+..||+|||+|.||..++..+... +++|+ ++|+++++++... ++. ......+|++
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a-----------~~~-----------~~~~~~~~~~~ 61 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFA-----------NKY-----------HLPKAYDKLED 61 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC--------------CC-----------CCSCEESCHHH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------HHc-----------CCCcccCCHHH
Confidence 346899999999999999888765 55655 7899987654321 111 1112455664
Q ss_pred ccc--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 223 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 223 ~l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
.+. ++|+|+.|+|..... ++.... +..+ .+++-..-+..+.+
T Consensus 62 ll~~~~~D~V~i~tp~~~h~--~~~~~a---l~aGk~Vl~EKP~a~~~~e 106 (329)
T 3evn_A 62 MLADESIDVIYVATINQDHY--KVAKAA---LLAGKHVLVEKPFTLTYDQ 106 (329)
T ss_dssp HHTCTTCCEEEECSCGGGHH--HHHHHH---HHTTCEEEEESSCCSSHHH
T ss_pred HhcCCCCCEEEECCCcHHHH--HHHHHH---HHCCCeEEEccCCcCCHHH
Confidence 344 799999999977543 332222 2233 35655554555554
No 350
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.99 E-value=0.012 Score=59.28 Aligned_cols=96 Identities=13% Similarity=0.010 Sum_probs=59.9
Q ss_pred ceeEEEEcCCcchH-HHHHHHHhCCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc-
Q 008509 147 VRKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 223 (563)
Q Consensus 147 ~~kv~ViGaG~mG~-~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 223 (563)
..||+|||+|.||. .++..+...|++| .++|+++++++...+ +-+ .....+|+++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~----------~~~------------~~~~~~~~~~l 61 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTS----------LFP------------SVPFAASAEQL 61 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHH----------HST------------TCCBCSCHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHH----------hcC------------CCcccCCHHHH
Confidence 35899999999996 6777777779985 689999887654321 111 1234556643
Q ss_pred cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 224 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 224 l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
++ ++|+|+.|+|..... ++..+ .+..+. +++--..+.++.+
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~---al~aGkhVl~EKP~a~~~~e 105 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDRA--ELALR---TLDAGKDFFTAKPPLTTLEQ 105 (336)
T ss_dssp HTCTTCCEEEECSCGGGHH--HHHHH---HHHTTCEEEECSSCCSCHHH
T ss_pred hhCCCCCEEEEeCChhhHH--HHHHH---HHHCCCcEEEeCCCCCCHHH
Confidence 43 689999999977543 22222 233344 5554334455543
No 351
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.011 Score=62.37 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=35.5
Q ss_pred cceeEEEEcCCcchHHHHHHHHhC-CCeEEEEeCCHHHHHH
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLK 185 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~ 185 (563)
..++|.|+|+|.+|..++..|++. |++|++++|++++++.
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~ 62 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQA 62 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence 457899999999999999999998 8999999999887654
No 352
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.93 E-value=0.02 Score=60.00 Aligned_cols=102 Identities=13% Similarity=0.056 Sum_probs=61.5
Q ss_pred ccceeEEEEcCCcchH-HHHHHHHhC-CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 145 RGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~-~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
++..||+|||+|.||. .++..+... +++| .++|+++++.+...+ +.|. .. ..+...+|+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~----------~~g~-~~-------~~~~~~~~~ 142 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAA----------EYGV-DP-------RKIYDYSNF 142 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHH----------HTTC-CG-------GGEECSSSG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHH----------HhCC-Cc-------ccccccCCH
Confidence 3446899999999997 888888765 6775 589999987654321 1121 00 012345566
Q ss_pred cc-cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 222 SE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 222 ~~-l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
++ +. ++|+|+.|+|..... ++... .+..+. |++-...++.+.+
T Consensus 143 ~~ll~~~~vD~V~iatp~~~h~--~~~~~---al~aGk~Vl~EKPla~~~~e 189 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILPNSLHA--EFAIR---AFKAGKHVMCEKPMATSVAD 189 (433)
T ss_dssp GGGGGCTTCCEEEECSCGGGHH--HHHHH---HHHTTCEEEECSSCCSSHHH
T ss_pred HHHhcCCCCCEEEEcCCchhHH--HHHHH---HHHCCCcEEEcCCCCCCHHH
Confidence 54 44 799999999977543 22222 233333 5554334455544
No 353
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.87 E-value=0.034 Score=55.96 Aligned_cols=95 Identities=11% Similarity=0.053 Sum_probs=59.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCC---Ce-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 148 RKVAVIGGGLMGSGIATAHILNN---IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G---~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
.||+|||+|.||...+..+...+ ++ |.++|+++++++...+. .| .....+|+++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~----------~~------------~~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQK----------HD------------IPKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHH----------HT------------CSCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHH----------cC------------CCcccCCHHH
Confidence 58999999999999999887654 34 55789999876653211 11 1123566643
Q ss_pred -cc--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 224 -FK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 224 -l~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
+. ++|+|+.|+|..... ++..+. +..+ .+++-..-+..+.+
T Consensus 61 ll~~~~vD~V~i~tp~~~H~--~~~~~a---l~~GkhVl~EKP~a~~~~e 105 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHK--AAVMLC---LAAGKAVLCEKPMGVNAAE 105 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHH--HHHHHH---HHTTCEEEEESSSSSSHHH
T ss_pred HhcCCCCCEEEECCCcHHHH--HHHHHH---HhcCCEEEEECCCCCCHHH
Confidence 33 699999999987643 332222 2233 35655544555554
No 354
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.87 E-value=0.018 Score=58.35 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=50.7
Q ss_pred ccceeEEEEcCCcchHH-HHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc
Q 008509 145 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 221 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 221 (563)
++|-||||||+|.||.. .+..+... +.+|+ ++|++++++++..++ -| .....+|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------~g------------~~~~y~d~ 78 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADR----------FS------------VPHAFGSY 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHH----------HT------------CSEEESSH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------cC------------CCeeeCCH
Confidence 35679999999999975 45566654 77866 789999887653211 01 12345677
Q ss_pred cc-c--cCCCEEEEecCCChHH
Q 008509 222 SE-F--KDVDMVIEAVIESVPL 240 (563)
Q Consensus 222 ~~-l--~~aDlVieav~e~~~~ 240 (563)
++ + .+.|+|+.|+|...-.
T Consensus 79 ~ell~~~~iDaV~I~tP~~~H~ 100 (350)
T 4had_A 79 EEMLASDVIDAVYIPLPTSQHI 100 (350)
T ss_dssp HHHHHCSSCSEEEECSCGGGHH
T ss_pred HHHhcCCCCCEEEEeCCCchhH
Confidence 54 3 5689999999987643
No 355
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.84 E-value=0.0065 Score=59.48 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=29.1
Q ss_pred ceeEEEEcC-CcchHHHHHHHHh-CCCeEE-EEeCCHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHIL-NNIYVV-LKEVNSE 181 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~-~G~~V~-l~d~~~~ 181 (563)
..||+|+|+ |.||..++..+.. .|++|+ ++|++++
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~ 42 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGS 42 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCch
Confidence 358999998 9999999998774 588877 7888764
No 356
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.82 E-value=0.0082 Score=58.03 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~ 180 (563)
.+|.|||+|.+|+.++..|+..|+ +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 589999999999999999999998 789998763
No 357
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.75 E-value=0.019 Score=54.41 Aligned_cols=38 Identities=18% Similarity=0.065 Sum_probs=34.8
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
++|.|.|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 68999998 999999999999999999999999887654
No 358
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.75 E-value=0.0084 Score=58.93 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=54.3
Q ss_pred eeEEEEcCCc-chHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+++.|||.|. +|..+|..|...|..|+++++....++. .+.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l-----------------------------------~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM-----------------------------------IDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH-----------------------------------HHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------------------------------hhhhcc
Confidence 6899999865 8999999999999999999974332210 023578
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
||+||.|++...-++. ..+++++++++..+
T Consensus 211 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYVKG-------EWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCcH-------HhcCCCcEEEEEec
Confidence 9999999985422322 34688998887544
No 359
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.74 E-value=0.0055 Score=58.35 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=34.3
Q ss_pred CccceeEEEEcC-CcchHHHHHHHHhCC-CeEEEEeCCHHHH
Q 008509 144 PRGVRKVAVIGG-GLMGSGIATAHILNN-IYVVLKEVNSEYL 183 (563)
Q Consensus 144 ~~~~~kv~ViGa-G~mG~~iA~~la~~G-~~V~l~d~~~~~~ 183 (563)
++++++|.|.|+ |.+|..++..|+..| ++|++++|+++.+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence 345788999996 999999999999999 8999999998753
No 360
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.74 E-value=0.16 Score=48.77 Aligned_cols=109 Identities=18% Similarity=0.160 Sum_probs=77.2
Q ss_pred eeee-cCcccccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhh---ccCC-CceeecccCCCC
Q 008509 215 LKGV-LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK---TSSQ-DRIIGAHFFSPA 289 (563)
Q Consensus 215 i~~~-~~~~~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~---~~~~-~r~ig~hf~~P~ 289 (563)
+..+ +|.++++++|++|.-.|--- .--.+.+++.+++++++||+ ||-++|...+... +.+. -.+..+||-.-|
T Consensus 129 VkVtsDD~EAvk~AEi~IlftPfG~-~t~~Iakkii~~lpEgAII~-nTCTipp~~ly~~le~l~R~DvgIsS~HPaaVP 206 (358)
T 2b0j_A 129 LKVTSDDREAVEGADIVITWLPKGN-KQPDIIKKFADAIPEGAIVT-HACTIPTTKFAKIFKDLGREDLNITSYHPGCVP 206 (358)
T ss_dssp CEEESCHHHHHTTCSEEEECCTTCT-THHHHHHHHGGGSCTTCEEE-ECSSSCHHHHHHHHHHTTCTTSEEEECBCSSCT
T ss_pred cEeecchHHHhcCCCEEEEecCCCC-CcHHHHHHHHhhCcCCCEEe-cccCCCHHHHHHHHHHhCcccCCeeccCCCCCC
Confidence 4444 45689999999999998643 23478899999999999885 5667776655543 4433 345556764422
Q ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEec
Q 008509 290 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 326 (563)
Q Consensus 290 ~~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~~ 326 (563)
.+..-........+++.++.+.++.+..|+.+.++.
T Consensus 207 -gt~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 207 -EMKGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp -TTCCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred -CCCCccccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 233334455556789999999999999999999873
No 361
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.73 E-value=0.0088 Score=58.99 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~ 180 (563)
.+|.|||+|..|+.++..|+++|+ +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 589999999999999999999997 899999875
No 362
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.70 E-value=0.019 Score=53.93 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.8
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 183 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 183 (563)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 578999996 9999999999999999999999997753
No 363
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.70 E-value=0.0058 Score=59.28 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=53.8
Q ss_pred eeEEEEcCC-cchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGG-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG-~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+++.|||.| .+|..+|..|...|..|++.+++...++ +.+++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------------------------~~~~~ 193 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------------------------SMTRS 193 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------------------------Hhhcc
Confidence 689999997 5899999999999999999986422111 34678
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
||+||.+++...-++. ..+++++++++..+
T Consensus 194 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 223 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLNR-------EMVTPGSVVIDVGI 223 (276)
T ss_dssp SSEEEECSSCTTCBCG-------GGCCTTCEEEECCC
T ss_pred CCEEEECCCCCccccH-------hhccCCcEEEEecc
Confidence 9999999975432332 34688998887554
No 364
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.63 E-value=0.024 Score=56.94 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.4
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCC-------eEEEEeCCH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~-------~V~l~d~~~ 180 (563)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 58999997 9999999999999996 899999975
No 365
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.55 E-value=0.012 Score=57.69 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=54.2
Q ss_pred eeEEEEcCC-cchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCc-cccc
Q 008509 148 RKVAVIGGG-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 225 (563)
Q Consensus 148 ~kv~ViGaG-~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 225 (563)
++|.|||.| .+|..+|..|+..|..|++.+++.. ++ +.++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~--------------------------------------~L~~~~~ 207 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA--------------------------------------HLDEEVN 207 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------------------------------SHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc--------------------------------------cHHHHhc
Confidence 689999999 4799999999999999999975422 22 3568
Q ss_pred CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 226 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 226 ~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
+||+||.|++..--++.+ .+++++++++..+
T Consensus 208 ~ADIVI~Avg~p~~I~~~-------~vk~GavVIDVgi 238 (301)
T 1a4i_A 208 KGDILVVATGQPEMVKGE-------WIKPGAIVIDCGI 238 (301)
T ss_dssp TCSEEEECCCCTTCBCGG-------GSCTTCEEEECCC
T ss_pred cCCEEEECCCCcccCCHH-------HcCCCcEEEEccC
Confidence 899999999764323333 3678998887654
No 366
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.50 E-value=0.035 Score=53.23 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=26.1
Q ss_pred eEEEEcC-CcchHHHHHHHHhC-CCeEE-EEeCC
Q 008509 149 KVAVIGG-GLMGSGIATAHILN-NIYVV-LKEVN 179 (563)
Q Consensus 149 kv~ViGa-G~mG~~iA~~la~~-G~~V~-l~d~~ 179 (563)
||+|+|+ |.||..++..+... |++|+ ++|++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~ 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC
Confidence 7999997 99999999998866 89887 55653
No 367
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.45 E-value=0.053 Score=55.75 Aligned_cols=94 Identities=15% Similarity=0.074 Sum_probs=59.7
Q ss_pred eeEEEEcCC-cchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc-
Q 008509 148 RKVAVIGGG-LMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 223 (563)
Q Consensus 148 ~kv~ViGaG-~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 223 (563)
.||+|||+| .||..++..+... +++|+ ++|+++++.+...+. + | +...+|+++
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----~------g-------------~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKE----Y------G-------------IPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHH----H------T-------------CCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHH----c------C-------------CCeECCHHHH
Confidence 589999999 9999999988875 66765 889999876553211 0 1 234566643
Q ss_pred c--cCCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 224 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 224 l--~~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
+ .++|+|+.|+|..... ++.... +..+ .+++-..-++++.+
T Consensus 60 l~~~~vD~V~i~tp~~~H~--~~~~~a---l~aGk~Vl~EKP~a~~~~e 103 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFHC--EHVVQA---SEQGLHIIVEKPLTLSRDE 103 (387)
T ss_dssp HHHSCCSEEEECSCGGGHH--HHHHHH---HHTTCEEEECSCCCSCHHH
T ss_pred HcCCCCCEEEEcCCcHHHH--HHHHHH---HHCCCceeeeCCccCCHHH
Confidence 3 3699999999977543 333222 2233 35554444455443
No 368
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.45 E-value=0.021 Score=56.22 Aligned_cols=40 Identities=20% Similarity=0.115 Sum_probs=35.7
Q ss_pred eeEEEEc-CCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
+++.|+| +|.+|.+++..|+..|.+|++++|++++++...
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~ 160 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAA 160 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHH
Confidence 5789999 899999999999999999999999988766543
No 369
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.43 E-value=0.011 Score=58.90 Aligned_cols=91 Identities=19% Similarity=0.071 Sum_probs=59.4
Q ss_pred eeEEEEcCCcc-hHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee-----e--c
Q 008509 148 RKVAVIGGGLM-GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-----V--L 219 (563)
Q Consensus 148 ~kv~ViGaG~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-----~--~ 219 (563)
++|.|||+|.| |..+|..|+..|..|++.|++..++. ++...-. . ..... + .
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~--------------~ra~~la----~--~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF--------------TRGESLK----L--NKHHVEDLGEYSED 237 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE--------------ESCCCSS----C--CCCEEEEEEECCHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHH--------------hHHHHHh----h--hcccccccccccHh
Confidence 68999999965 99999999999999999999843211 0110000 0 00111 1 3
Q ss_pred Cc-ccccCCCEEEEecCCChH-HHHHHHHHHHhhCCCCeEEEecCCCC
Q 008509 220 DY-SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNTSTI 265 (563)
Q Consensus 220 ~~-~~l~~aDlVieav~e~~~-~k~~v~~~l~~~~~~~~ii~sntS~l 265 (563)
++ +.+.+||+||.|++..-- ++.+ .+++++++++..+.-
T Consensus 238 ~L~e~l~~ADIVIsAtg~p~~vI~~e-------~vk~GavVIDVgi~r 278 (320)
T 1edz_A 238 LLKKCSLDSDVVITGVPSENYKFPTE-------YIKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHCSEEEECCCCTTCCBCTT-------TSCTTEEEEECSSSC
T ss_pred HHHHHhccCCEEEECCCCCcceeCHH-------HcCCCeEEEEcCCCc
Confidence 44 577899999999975422 3322 357888888776543
No 370
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.42 E-value=0.12 Score=50.80 Aligned_cols=95 Identities=17% Similarity=0.209 Sum_probs=63.1
Q ss_pred eeEEEEcCCcchHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeee-cCcccc-
Q 008509 148 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF- 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~-~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~l- 224 (563)
.+|..||+|+.|.+.. .+++ .|.+|+.+|++++.++.+++.+.+ .|. .++... .|...+
T Consensus 124 ~rVLDIGcG~G~~ta~-~lA~~~ga~V~gIDis~~~l~~Ar~~~~~-------~gl----------~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGI-LLSHVYGMRVNVVEIEPDIAELSRKVIEG-------LGV----------DGVNVITGDETVID 185 (298)
T ss_dssp CEEEEECCCSSCHHHH-HHHHTTCCEEEEEESSHHHHHHHHHHHHH-------HTC----------CSEEEEESCGGGGG
T ss_pred CEEEEECCCccHHHHH-HHHHccCCEEEEEECCHHHHHHHHHHHHh-------cCC----------CCeEEEECchhhCC
Confidence 6899999999654322 2344 589999999999999988654422 121 233332 222222
Q ss_pred -cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecC
Q 008509 225 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 225 -~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
...|+|+.+.. ..-+..+++++...++|+..++...
T Consensus 186 d~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 186 GLEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp GCCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 46799997654 2346789999999999987766543
No 371
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.41 E-value=0.023 Score=57.13 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=31.5
Q ss_pred ceeEEEEcCCcchHH-HHHHHHhCCCeEEEEeCCH
Q 008509 147 VRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~-iA~~la~~G~~V~l~d~~~ 180 (563)
+++|.|||.|.+|.+ +|..|.+.|++|+++|.++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 679999999999995 9999999999999999975
No 372
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.40 E-value=0.027 Score=57.51 Aligned_cols=69 Identities=17% Similarity=0.194 Sum_probs=48.5
Q ss_pred ceeEEEEcCCcchHH-HHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-
Q 008509 147 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 222 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 222 (563)
..||+|||+|.||.. .+..+... +++|+ ++|+++++++. .. ......+|++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~~------------~~~~~~~~~~~ 61 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-------------DL------------PDVTVIASPEA 61 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-------------HC------------TTSEEESCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------hC------------CCCcEECCHHH
Confidence 468999999999997 56666654 78875 88999875431 11 1234556774
Q ss_pred ccc--CCCEEEEecCCChHH
Q 008509 223 EFK--DVDMVIEAVIESVPL 240 (563)
Q Consensus 223 ~l~--~aDlVieav~e~~~~ 240 (563)
.+. +.|+|+.|+|.....
T Consensus 62 ll~~~~~D~V~i~tp~~~H~ 81 (364)
T 3e82_A 62 AVQHPDVDLVVIASPNATHA 81 (364)
T ss_dssp HHTCTTCSEEEECSCGGGHH
T ss_pred HhcCCCCCEEEEeCChHHHH
Confidence 344 789999999987643
No 373
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.29 E-value=0.031 Score=55.01 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.3
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
|||.|.|+ |.+|+.++..|...||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999998 99999999999999999999998764
No 374
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.28 E-value=0.068 Score=52.07 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=31.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
++|.|||+|..|..-+..|+..|.+|++++.+.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 689999999999999999999999999999864
No 375
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.27 E-value=0.03 Score=56.94 Aligned_cols=69 Identities=16% Similarity=0.135 Sum_probs=48.1
Q ss_pred ceeEEEEcCCcchHH-HHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-
Q 008509 147 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 222 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 222 (563)
..||+|||+|.||.. .+..+... +++|+ ++|++++++.+ +. ..+...+|++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~~------------~~~~~~~~~~~ 59 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-------------DF------------PDAEVVHELEE 59 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-------------HC------------TTSEEESSTHH
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------hC------------CCCceECCHHH
Confidence 458999999999997 56666554 77865 88999865221 11 1234566775
Q ss_pred ccc--CCCEEEEecCCChHH
Q 008509 223 EFK--DVDMVIEAVIESVPL 240 (563)
Q Consensus 223 ~l~--~aDlVieav~e~~~~ 240 (563)
.+. +.|+|+.|+|.....
T Consensus 60 ll~~~~vD~V~i~tp~~~H~ 79 (358)
T 3gdo_A 60 ITNDPAIELVIVTTPSGLHY 79 (358)
T ss_dssp HHTCTTCCEEEECSCTTTHH
T ss_pred HhcCCCCCEEEEcCCcHHHH
Confidence 344 789999999987653
No 376
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.26 E-value=0.1 Score=52.57 Aligned_cols=107 Identities=13% Similarity=0.143 Sum_probs=59.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCC-CHHHH-HhhhcCeeeecCc-c
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKA-NNALKMLKGVLDY-S 222 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~-~~~~~~i~~~~~~-~ 222 (563)
.||+|+|+|.+|..++..+..+ +++|+ +.|.+++......+ ++...-.|.+ ...+. ...-..+....+. +
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~-----~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~ 77 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAV-----EKGYKLFVAIPDNERVKLFEDAGIPVEGTILD 77 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHH-----HTTCCEEESSCCHHHHHHHHHTTCCCCCBGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHH-----hcCCccccccCCCceeecccCCeEEECCchHH
Confidence 5899999999999999998876 57765 45666554332211 0000011222 11111 0001122222233 3
Q ss_pred cccCCCEEEEecCCChHHHHHHHHHH-HhhCCCCeEEEecCCC
Q 008509 223 EFKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTST 264 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~~k~~v~~~l-~~~~~~~~ii~sntS~ 264 (563)
.+.++|+|++|.+..... +.. ..++..++.++++.+.
T Consensus 78 ~~~~vDiV~eatg~~~s~-----~~a~~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 78 IIEDADIVVDGAPKKIGK-----QNLENIYKPHKVKAILQGGE 115 (343)
T ss_dssp TGGGCSEEEECCCTTHHH-----HHHHHTTTTTTCEEEECTTS
T ss_pred hccCCCEEEECCCccccH-----HHHHHHHHHCCCEEEECCCc
Confidence 447999999999876422 122 3667777776665543
No 377
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.23 E-value=0.015 Score=56.70 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=53.8
Q ss_pred eeEEEEcCCc-chHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+++.|||.|. .|..+|..|+..|..|++.+++...++ +.+++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~-------------------------------------~~~~~ 203 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------------------------LYTRQ 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhhc
Confidence 6899999876 799999999999999999986422111 34688
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
||+||.+++...-++. +.+++++++++..+
T Consensus 204 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 233 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLRS-------DMVKEGVIVVDVGI 233 (285)
T ss_dssp CSEEEECSSCTTCBCG-------GGSCTTEEEEECCC
T ss_pred CCEEEECCCCCCcCCH-------HHcCCCeEEEEecc
Confidence 9999999975422322 34688998877543
No 378
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.20 E-value=0.011 Score=55.85 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.2
Q ss_pred eEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 149 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 149 kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
.|+|||+|.-|...|..|+++|++|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999864
No 379
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.16 E-value=0.048 Score=57.25 Aligned_cols=76 Identities=18% Similarity=0.212 Sum_probs=51.7
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec----C
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL----D 220 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~----~ 220 (563)
..||+|||+|.||...+..+... |++| .++|+++++++...+.+. +.|. ......+ |
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~~~ 82 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGNDD 82 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSSTTT
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCCCC
Confidence 46899999999999999888875 7776 588999988766432110 1121 0123344 6
Q ss_pred cc-ccc--CCCEEEEecCCChH
Q 008509 221 YS-EFK--DVDMVIEAVIESVP 239 (563)
Q Consensus 221 ~~-~l~--~aDlVieav~e~~~ 239 (563)
++ .++ ++|+|+.|+|....
T Consensus 83 ~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 83 YKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp HHHHTTCTTCCEEEECCCGGGH
T ss_pred HHHHhcCCCCCEEEEcCCcHHH
Confidence 64 344 68999999997754
No 380
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=95.10 E-value=0.017 Score=56.33 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=53.2
Q ss_pred eeEEEEcCCc-chHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+++.|||.|. +|..+|..|...|..|++.++....++ +.+++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 204 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------------------------SHTTK 204 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------Hhccc
Confidence 6899999876 799999999999999999875421111 34688
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
||+||.|++...-++. +.+++++++++..+
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 234 (285)
T 3l07_A 205 ADILIVAVGKPNFITA-------DMVKEGAVVIDVGI 234 (285)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCcEEEEecc
Confidence 9999999974422322 34688998876543
No 381
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.10 E-value=0.011 Score=57.84 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=53.6
Q ss_pred eeEEEEcCCc-chHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
++|.|||.|. .|..+|..|+..|..|++.++....+. +.+++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 202 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR-------------------------------------HHVEN 202 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH-------------------------------------HHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhcc
Confidence 6899999995 699999999999999999985442221 34578
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
||+||.|++..--++.+ .+++++++++..+
T Consensus 203 ADIVI~Avg~p~lI~~~-------~vk~GavVIDVgi 232 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIPGD-------WIKEGAIVIDVGI 232 (288)
T ss_dssp CSEEEECSCCTTCBCTT-------TSCTTCEEEECCC
T ss_pred CCEEEECCCCcCcCCHH-------HcCCCcEEEEccC
Confidence 99999999754223322 3578898877543
No 382
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.04 E-value=0.035 Score=56.36 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=30.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~ 180 (563)
.+|.|||+|..|+.+|..|+.+|+ +++++|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 579999999999999999999998 899999863
No 383
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.01 E-value=0.098 Score=48.71 Aligned_cols=36 Identities=14% Similarity=0.260 Sum_probs=32.5
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 183 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 183 (563)
+||.|+|+ |.+|..++..|++.|++|++.+|+++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 37999995 9999999999999999999999998653
No 384
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.96 E-value=0.1 Score=55.50 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=50.8
Q ss_pred ccceeEEEEcCCcchHH-HHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 145 RGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~-iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
..+++|.|||.|..|.+ +|..|.+.|++|+++|.++.... +.+.+.|. .+....+.+.
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~----------~~l~~~gi-----------~~~~g~~~~~ 78 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVT----------QHLTALGA-----------QIYFHHRPEN 78 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHH----------HHHHHTTC-----------EEESSCCGGG
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHH----------HHHHHCCC-----------EEECCCCHHH
Confidence 35789999999999985 99999999999999998754311 11223331 1222234456
Q ss_pred ccCCCEEEEe--cCC-ChHHH
Q 008509 224 FKDVDMVIEA--VIE-SVPLK 241 (563)
Q Consensus 224 l~~aDlViea--v~e-~~~~k 241 (563)
+.++|+||.+ ||. +++++
T Consensus 79 ~~~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 79 VLDASVVVVSTAISADNPEIV 99 (494)
T ss_dssp GTTCSEEEECTTSCTTCHHHH
T ss_pred cCCCCEEEECCCCCCCCHHHH
Confidence 7889999975 543 44443
No 385
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=94.94 E-value=0.014 Score=59.98 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
+||.|||+|.-|..+|..|+++|++|+++|++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 4899999999999999999999999999998653
No 386
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.88 E-value=0.038 Score=55.76 Aligned_cols=71 Identities=14% Similarity=-0.018 Sum_probs=51.0
Q ss_pred ceeEEEEcCC-cchHHHHHHHHhC--CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 147 VRKVAVIGGG-LMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 147 ~~kv~ViGaG-~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
..||+|||+| .||...+..+... +++| .++|+++++++...++ -| .....+|++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~~------------~~~~~~~~~ 75 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM----------VG------------NPAVFDSYE 75 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH----------HS------------SCEEESCHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH----------hC------------CCcccCCHH
Confidence 4589999999 8999999988876 5666 5889999876653211 01 124456775
Q ss_pred c-c--cCCCEEEEecCCChH
Q 008509 223 E-F--KDVDMVIEAVIESVP 239 (563)
Q Consensus 223 ~-l--~~aDlVieav~e~~~ 239 (563)
+ + .+.|+|+.|+|....
T Consensus 76 ~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 76 ELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp HHHHSSCCSEEEECCCGGGH
T ss_pred HHhcCCCCCEEEEeCCchHH
Confidence 3 3 368999999997653
No 387
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=94.86 E-value=0.052 Score=55.25 Aligned_cols=95 Identities=8% Similarity=0.100 Sum_probs=59.0
Q ss_pred eeEEEEcCCcchH-HHHHHHHhCCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc-c
Q 008509 148 RKVAVIGGGLMGS-GIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F 224 (563)
Q Consensus 148 ~kv~ViGaG~mG~-~iA~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-l 224 (563)
.||+|||+|.+|. .++..+...|++|+ ++|+++++++...+ +-| .....+|+++ +
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~----------~~~------------~~~~~~~~~~ll 84 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSA----------VYA------------DARRIATAEEIL 84 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHH----------HSS------------SCCEESCHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHH----------HcC------------CCcccCCHHHHh
Confidence 5899999999995 56777777899854 88999988665321 111 1234567653 3
Q ss_pred c--CCCEEEEecCCChHHHHHHHHHHHhhCCCC-eEEEecCCCCCHHH
Q 008509 225 K--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 269 (563)
Q Consensus 225 ~--~aDlVieav~e~~~~k~~v~~~l~~~~~~~-~ii~sntS~l~i~~ 269 (563)
. +.|+|+.|+|..... ++.... +..+ .|++-..-+..+.+
T Consensus 85 ~~~~vD~V~I~tp~~~H~--~~~~~a---l~aGkhVl~EKPla~~~~e 127 (361)
T 3u3x_A 85 EDENIGLIVSAAVSSERA--ELAIRA---MQHGKDVLVDKPGMTSFDQ 127 (361)
T ss_dssp TCTTCCEEEECCCHHHHH--HHHHHH---HHTTCEEEEESCSCSSHHH
T ss_pred cCCCCCEEEEeCChHHHH--HHHHHH---HHCCCeEEEeCCCCCCHHH
Confidence 3 589999999866432 333222 2233 35554444444443
No 388
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.82 E-value=0.02 Score=55.83 Aligned_cols=72 Identities=17% Similarity=0.144 Sum_probs=52.8
Q ss_pred eeEEEEcCCc-chHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccC
Q 008509 148 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 226 (563)
Q Consensus 148 ~kv~ViGaG~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 226 (563)
+++.|||.|. .|..+|..|+..|..|++..+....++ +.+++
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~-------------------------------------~~~~~ 204 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA-------------------------------------DHVSR 204 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-------------------------------------HHhcc
Confidence 6899999865 899999999999999999875321111 34678
Q ss_pred CCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCC
Q 008509 227 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 263 (563)
Q Consensus 227 aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS 263 (563)
||+||.+++...-++. +.+++++++++..+
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 234 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVKG-------EWIKEGAIVIDVGI 234 (286)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCS
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCeEEEEecc
Confidence 9999999975422322 34688888876543
No 389
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.81 E-value=0.055 Score=51.12 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=35.5
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 188 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 188 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++.+.++...+
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAH 44 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56778887 889999999999999999999999988776543
No 390
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=94.78 E-value=0.023 Score=55.75 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=56.3
Q ss_pred ceeEEEEc-CCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhh-hcCeeeecCcc
Q 008509 147 VRKVAVIG-GGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA-LKMLKGVLDYS 222 (563)
Q Consensus 147 ~~kv~ViG-aG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~-~~~i~~~~~~~ 222 (563)
..||+|+| +|.||..++..+... +++++ ++|++++.. .|. +..+.... ...+..++|++
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~----------------~G~-d~gel~G~~~~gv~v~~dl~ 83 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSF----------------VDK-DASILIGSDFLGVRITDDPE 83 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTT----------------TTS-BGGGGTTCSCCSCBCBSCHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccc----------------ccc-chHHhhccCcCCceeeCCHH
Confidence 35899999 899999999988754 77755 568864320 000 00000000 01244556764
Q ss_pred -cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 008509 223 -EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266 (563)
Q Consensus 223 -~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~ 266 (563)
.+.++|+||++.+.+ ..+..+...+..+.-+++.|++++
T Consensus 84 ~ll~~aDVvIDFT~p~-----a~~~~~~~~l~~Gv~vViGTTG~~ 123 (288)
T 3ijp_A 84 SAFSNTEGILDFSQPQ-----ASVLYANYAAQKSLIHIIGTTGFS 123 (288)
T ss_dssp HHTTSCSEEEECSCHH-----HHHHHHHHHHHHTCEEEECCCCCC
T ss_pred HHhcCCCEEEEcCCHH-----HHHHHHHHHHHcCCCEEEECCCCC
Confidence 467899999987522 233334444445555555555554
No 391
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.74 E-value=0.027 Score=53.56 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=34.9
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~ 44 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQE 44 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 56778887 89999999999999999999999998876643
No 392
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=94.73 E-value=0.047 Score=56.42 Aligned_cols=74 Identities=19% Similarity=0.184 Sum_probs=50.5
Q ss_pred ceeEEEEcCCc---chHHHHHHHHhCC-CeEE--EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecC
Q 008509 147 VRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220 (563)
Q Consensus 147 ~~kv~ViGaG~---mG~~iA~~la~~G-~~V~--l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 220 (563)
.-||+|||+|. ||...+..+...+ ++|+ ++|+++++.+...+ +.| +.. ....+|
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~----------~~g-~~~---------~~~~~~ 71 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGE----------QLG-VDS---------ERCYAD 71 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHH----------HTT-CCG---------GGBCSS
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHH----------HhC-CCc---------ceeeCC
Confidence 46899999999 9999988887764 7776 57999988665321 112 100 123456
Q ss_pred ccc-cc-------CCCEEEEecCCChHH
Q 008509 221 YSE-FK-------DVDMVIEAVIESVPL 240 (563)
Q Consensus 221 ~~~-l~-------~aDlVieav~e~~~~ 240 (563)
+++ +. +.|+|+.|+|.....
T Consensus 72 ~~~ll~~~~~~~~~vD~V~i~tp~~~H~ 99 (398)
T 3dty_A 72 YLSMFEQEARRADGIQAVSIATPNGTHY 99 (398)
T ss_dssp HHHHHHHHTTCTTCCSEEEEESCGGGHH
T ss_pred HHHHHhcccccCCCCCEEEECCCcHHHH
Confidence 643 33 499999999987643
No 393
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=94.66 E-value=0.052 Score=52.10 Aligned_cols=43 Identities=26% Similarity=0.196 Sum_probs=35.9
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 190 (563)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 56 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHI 56 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45667777 88999999999999999999999998877654433
No 394
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=94.62 E-value=0.046 Score=56.68 Aligned_cols=71 Identities=21% Similarity=0.222 Sum_probs=49.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhC---------CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee
Q 008509 148 RKVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~---------G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 217 (563)
-||||||+|.||...+..+.+. +.+|+ ++|++++++++..++ -| ....
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~----------~~------------~~~~ 84 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAK----------LG------------AEKA 84 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHH----------HT------------CSEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHH----------cC------------CCeE
Confidence 3799999999999888777654 34544 789999987664321 01 1234
Q ss_pred ecCccc-c--cCCCEEEEecCCChHH
Q 008509 218 VLDYSE-F--KDVDMVIEAVIESVPL 240 (563)
Q Consensus 218 ~~~~~~-l--~~aDlVieav~e~~~~ 240 (563)
.+|+++ + .+.|+|+.|+|.....
T Consensus 85 y~d~~~ll~~~~vD~V~I~tp~~~H~ 110 (412)
T 4gqa_A 85 YGDWRELVNDPQVDVVDITSPNHLHY 110 (412)
T ss_dssp ESSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred ECCHHHHhcCCCCCEEEECCCcHHHH
Confidence 567753 3 4689999999987643
No 395
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.61 E-value=0.018 Score=56.07 Aligned_cols=71 Identities=23% Similarity=0.231 Sum_probs=52.7
Q ss_pred eeEEEEcCCcc-hHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 148 RKVAVIGGGLM-GSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 148 ~kv~ViGaG~m-G~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
+++.|||.|.| |..+|..|... |..|++.+++...+. +.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~-------------------------------------~~~ 201 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP-------------------------------------ALT 201 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH-------------------------------------HHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH-------------------------------------HHH
Confidence 68999999975 99999999999 899999875432211 356
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecC
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 262 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~snt 262 (563)
++||+||.|++..--++.+ .+++++++++..
T Consensus 202 ~~ADIVI~Avg~p~~I~~~-------~vk~GavVIDVg 232 (281)
T 2c2x_A 202 RQADIVVAAVGVAHLLTAD-------MVRPGAAVIDVG 232 (281)
T ss_dssp TTCSEEEECSCCTTCBCGG-------GSCTTCEEEECC
T ss_pred hhCCEEEECCCCCcccCHH-------HcCCCcEEEEcc
Confidence 8899999999754223333 357888887644
No 396
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=94.60 E-value=0.05 Score=55.14 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=48.3
Q ss_pred eeEEEEcCCcchHH-HHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc-
Q 008509 148 RKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 223 (563)
.||+|||+|.||.. .+..+... +++|+ ++|+++++++. .. ......+|+++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~~------------~~~~~~~~~~~l 62 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------DW------------PAIPVVSDPQML 62 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------TC------------SSCCEESCHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------hC------------CCCceECCHHHH
Confidence 58999999999997 67777665 77875 88999876431 11 12334567653
Q ss_pred c--cCCCEEEEecCCChHH
Q 008509 224 F--KDVDMVIEAVIESVPL 240 (563)
Q Consensus 224 l--~~aDlVieav~e~~~~ 240 (563)
+ .+.|+|+.|+|.....
T Consensus 63 l~~~~vD~V~i~tp~~~H~ 81 (352)
T 3kux_A 63 FNDPSIDLIVIPTPNDTHF 81 (352)
T ss_dssp HHCSSCCEEEECSCTTTHH
T ss_pred hcCCCCCEEEEeCChHHHH
Confidence 3 3599999999987653
No 397
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=94.59 E-value=0.06 Score=54.15 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=59.8
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhC-CCeEEEEeCCH---HHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec--
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNS---EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL-- 219 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~-G~~V~l~d~~~---~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-- 219 (563)
|.||+|+|+ |.+|..+...|..+ .+++..+..+. +.-+. +...+..+ +|. ..+....
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~----~~~~~p~~--~~~----------~~~~v~~~~ 67 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL----ISDLHPQL--KGI----------VELPLQPMS 67 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSB----HHHHCGGG--TTT----------CCCBEEEES
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCc----hHHhCccc--cCc----------cceeEeccC
Confidence 579999996 99999999999884 67887765443 21000 00000000 010 0122222
Q ss_pred Ccccc-cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCH
Q 008509 220 DYSEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 267 (563)
Q Consensus 220 ~~~~l-~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i 267 (563)
+.+.+ .++|+||+|+|... -+++..+ ++..++.++++++...+
T Consensus 68 ~~~~~~~~~Dvvf~a~p~~~--s~~~~~~---~~~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATAHEV--SHDLAPQ---FLEAGCVVFDLSGAFRV 111 (337)
T ss_dssp SGGGTCTTCSEEEECSCHHH--HHHHHHH---HHHTTCEEEECSSTTSS
T ss_pred CHHHHhcCCCEEEECCChHH--HHHHHHH---HHHCCCEEEEcCCcccc
Confidence 44556 89999999998543 2334333 34568888999887644
No 398
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.59 E-value=0.12 Score=51.34 Aligned_cols=39 Identities=18% Similarity=0.144 Sum_probs=34.8
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
-++|.|.|+ |.+|+.++..|++.|++|++.+++.+..+.
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 50 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLAN 50 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHH
Confidence 368999998 999999999999999999999999876544
No 399
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.59 E-value=0.15 Score=53.60 Aligned_cols=131 Identities=18% Similarity=0.221 Sum_probs=75.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccccCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 227 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 227 (563)
++|.|||+|..|..-+..|.+.|.+|+++|.+... . +..+.+.+.++ .+...-+.+.+.++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~--~--------~~~l~~~~~i~---------~~~~~~~~~~l~~~ 73 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNALTFIP--Q--------FTVWANEGMLT---------LVEGPFDETLLDSC 73 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCH--H--------HHHHHTTTSCE---------EEESSCCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCH--H--------HHHHHhcCCEE---------EEECCCCccccCCc
Confidence 68999999999999999999999999999986432 0 11122222211 11111223577899
Q ss_pred CEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCC--CCCCeEEEEeCCCCCH
Q 008509 228 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTSA 305 (563)
Q Consensus 228 DlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~--~~~~lvEiv~~~~t~~ 305 (563)
|+||-| |.+.++...++....+ ..|.+...+.. +. ..|+.|. ...+++--|.+...++
T Consensus 74 ~lVi~a-t~~~~~n~~i~~~a~~----~~i~vn~~d~~------------e~---~~~~~pa~~~~~~l~iaIsT~Gksp 133 (457)
T 1pjq_A 74 WLAIAA-TDDDTVNQRVSDAAES----RRIFCNVVDAP------------KA---ASFIMPSIIDRSPLMVAVSSGGTSP 133 (457)
T ss_dssp SEEEEC-CSCHHHHHHHHHHHHH----TTCEEEETTCT------------TS---SSEECCEEEEETTEEEEEECTTSCH
T ss_pred cEEEEc-CCCHHHHHHHHHHHHH----cCCEEEECCCc------------cc---CceEeeeEEEeCCeEEEEECCCCCh
Confidence 999876 5666666666655433 22333222221 11 1233332 2345555555666677
Q ss_pred HHHHHHHHHHHH
Q 008509 306 QVILDLMTVGKI 317 (563)
Q Consensus 306 ~~~~~~~~l~~~ 317 (563)
.....+++.++.
T Consensus 134 ~la~~ir~~ie~ 145 (457)
T 1pjq_A 134 VLARLLREKLES 145 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666655543
No 400
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=94.55 E-value=0.05 Score=52.48 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=34.8
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 188 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 188 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR 49 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 45777776 899999999999999999999999887665443
No 401
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=94.49 E-value=0.021 Score=57.21 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=26.5
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC-------CCeEE-EEeCCHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN-------NIYVV-LKEVNSE 181 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~-------G~~V~-l~d~~~~ 181 (563)
.-+|+|||+|.||+.++..+.+. +++|+ +.|++.+
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~ 46 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSY 46 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBE
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChh
Confidence 35899999999999999998763 34544 5566643
No 402
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=94.48 E-value=0.024 Score=57.85 Aligned_cols=69 Identities=13% Similarity=0.124 Sum_probs=47.7
Q ss_pred cceeEEEEcCCcchHH-HHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 146 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
+..||+|||+|.||.. .+..+... +++|+ ++|++++++.+ + ...+...+|++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~ 58 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------R------------YPQASIVRSFK 58 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------T------------CTTSEEESCSH
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------h------------CCCCceECCHH
Confidence 3468999999999997 66666665 78875 78998764211 0 11234566775
Q ss_pred -ccc--CCCEEEEecCCChH
Q 008509 223 -EFK--DVDMVIEAVIESVP 239 (563)
Q Consensus 223 -~l~--~aDlVieav~e~~~ 239 (563)
.+. ++|+|+.|+|....
T Consensus 59 ~ll~~~~vD~V~i~tp~~~H 78 (362)
T 3fhl_A 59 ELTEDPEIDLIVVNTPDNTH 78 (362)
T ss_dssp HHHTCTTCCEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHHH
Confidence 344 48999999998754
No 403
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=94.45 E-value=0.025 Score=56.82 Aligned_cols=196 Identities=17% Similarity=0.144 Sum_probs=92.6
Q ss_pred ceeEEEEcCCcchHHHHHHHHhC---------CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCee
Q 008509 147 VRKVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 216 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~---------G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~ 216 (563)
+.||+|||+|.||+.++..+... +++|+ +.|++.+..+. . ...+.+......+.++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~-i-d~~~~~~~~~~~~~~~------------ 67 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD-F-SLVEALRMKRETGMLR------------ 67 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS-C-CHHHHHHHHHHHSSCS------------
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc-c-CHHHHHhhhccCcccc------------
Confidence 46899999999999999998875 55655 56776543221 0 0000111111111110
Q ss_pred eecCccc-c--cCCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCC--HHHHhhhccCCCceeecccCCCCC
Q 008509 217 GVLDYSE-F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH 290 (563)
Q Consensus 217 ~~~~~~~-l--~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~--i~~la~~~~~~~r~ig~hf~~P~~ 290 (563)
...|++. + .+.|+||+|+|.+..... .+..+...+..+. +++.|...+. ..+|.+..... |.+|+....
T Consensus 68 ~~~d~~~ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~----g~~~~~ea~ 142 (327)
T 3do5_A 68 DDAKAIEVVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERN----GVRLMYEAT 142 (327)
T ss_dssp BCCCHHHHHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHT----TCCEECGGG
T ss_pred CCCCHHHHhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhh----CCcEEEEEE
Confidence 0124432 2 468999999997753111 2333444555555 4445543221 12333332211 222222111
Q ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHhCCceEEe----cCcchhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhcCC
Q 008509 291 VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVV----GNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGL 366 (563)
Q Consensus 291 ~~~lvEiv~~~~t~~~~~~~~~~l~~~lGk~~v~~----~d~~Gfi~nRl~~~~~~Ea~~l~~~G~~~~~ID~a~~~~G~ 366 (563)
.+. + --.+..+++++. |-....+ +..-.|+.++ +.++|.+.+++=.-....||
T Consensus 143 v~~------g----~Pii~~l~~~l~--~~~I~~I~GIlnGT~nyilt~-----------m~~~g~~f~~~l~~Aq~~Gy 199 (327)
T 3do5_A 143 VGG------A----MPVVKLAKRYLA--LCEIESVKGIFNGTCNYILSR-----------MEEERLPYEHILKEAQELGY 199 (327)
T ss_dssp SST------T----SCCHHHHHTTTT--TSCEEEEEEECCHHHHHHHHH-----------HHHHCCCHHHHHHHHHHTTS
T ss_pred eee------c----CHHHHHHHHHhh--CCCccEEEEEECCCcCcchhh-----------cCcCCcCHHHHHHHHHHcCC
Confidence 110 0 011344444432 2222222 2222233332 22568887776666656666
Q ss_pred CccHHHHhhhhchHHHHHH
Q 008509 367 PIGPFQLLDLAGYGVAAAT 385 (563)
Q Consensus 367 p~GPf~~~D~~Gld~~~~~ 385 (563)
.- |==..|.-|.|...++
T Consensus 200 aE-~DP~~Dv~G~D~a~Kl 217 (327)
T 3do5_A 200 AE-ADPSYDVEGIDAALKL 217 (327)
T ss_dssp SC-SSCHHHHTSHHHHHHH
T ss_pred CC-CCchhhcCChhHHHHH
Confidence 31 1125789999998873
No 404
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=94.43 E-value=0.047 Score=53.46 Aligned_cols=41 Identities=29% Similarity=0.299 Sum_probs=34.4
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 188 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 188 (563)
+++.|.|+ |-+|.++|..|++.|++|++.+++++.++...+
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 75 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAG 75 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 34566676 889999999999999999999999988776543
No 405
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.43 E-value=0.014 Score=54.95 Aligned_cols=77 Identities=22% Similarity=0.242 Sum_probs=45.0
Q ss_pred eeEEEEcCCcchHHHHHH--HHhCCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 148 RKVAVIGGGLMGSGIATA--HILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~--la~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
.+|+|||+|.+|..++.. +...|++|+ ++|.|++...... .| + .+...++++ .
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i------------~g-v----------~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEV------------GG-V----------PVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEE------------TT-E----------EEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHh------------cC-C----------eeechhhHHHH
Confidence 579999999999999994 345577655 8899987532200 00 0 122344553 3
Q ss_pred ccCCCEEEEecCCChHHHHHHHHHHH
Q 008509 224 FKDVDMVIEAVIESVPLKQKIFSELE 249 (563)
Q Consensus 224 l~~aDlVieav~e~~~~k~~v~~~l~ 249 (563)
+++.|+||.|+|... .+++...+.
T Consensus 143 i~~~D~ViIAvPs~~--~~ei~~~l~ 166 (215)
T 2vt3_A 143 VKDESVAILTVPAVA--AQSITDRLV 166 (215)
T ss_dssp CSSCCEEEECSCHHH--HHHHHHHHH
T ss_pred HHhCCEEEEecCchh--HHHHHHHHH
Confidence 444499999998643 235555443
No 406
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=94.35 E-value=0.056 Score=54.47 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=28.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYL 183 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~ 183 (563)
.||+|+|+|.||.-++..+.++ +++|+ +.|++++..
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~ 39 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFE 39 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHH
Confidence 5899999999999999999874 66764 457765543
No 407
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=94.32 E-value=0.023 Score=61.79 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=30.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~ 180 (563)
.+|.|||+|..|+.++..|+..|+ +++++|.+.
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 589999999999999999999998 899999763
No 408
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=94.30 E-value=0.031 Score=53.43 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=34.1
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 51 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA 51 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56778877 9999999999999999999999998876653
No 409
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.25 E-value=0.036 Score=56.42 Aligned_cols=32 Identities=28% Similarity=0.215 Sum_probs=30.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCC
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN 179 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~ 179 (563)
.||.|+|+|.+|.++|..+...|. +|+++|++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 689999999999999999999998 89999998
No 410
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=94.25 E-value=0.063 Score=52.04 Aligned_cols=40 Identities=30% Similarity=0.258 Sum_probs=34.2
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 62 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAA 62 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45777776 89999999999999999999999988766543
No 411
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=94.19 E-value=0.023 Score=57.50 Aligned_cols=70 Identities=14% Similarity=0.084 Sum_probs=46.2
Q ss_pred eeEEEEcCCcchHHHHHH-H-Hh-CCCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCccc
Q 008509 148 RKVAVIGGGLMGSGIATA-H-IL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~-l-a~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 223 (563)
.||+|||+|.||..+... + .. .+++|+ ++|+++++.+.. + ....+...+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~------------~-----------~~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQA------------P-----------IYSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGS------------G-----------GGTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHH------------H-----------hcCCCceECCHHH
Confidence 589999999999874433 3 32 378877 899987653210 0 0112445677753
Q ss_pred -cc--CCCEEEEecCCChHH
Q 008509 224 -FK--DVDMVIEAVIESVPL 240 (563)
Q Consensus 224 -l~--~aDlVieav~e~~~~ 240 (563)
+. ++|+|+.|+|.....
T Consensus 60 ll~~~~~D~V~i~tp~~~h~ 79 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSHF 79 (345)
T ss_dssp HHTCTTEEEEEECSCGGGHH
T ss_pred HhcCCCCCEEEEcCChHHHH
Confidence 44 489999999987643
No 412
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=94.19 E-value=0.059 Score=54.14 Aligned_cols=64 Identities=19% Similarity=0.177 Sum_probs=44.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhC---------CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeee
Q 008509 148 RKVAVIGGGLMGSGIATAHILN---------NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 217 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~---------G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 217 (563)
.||+|||+|+||++++..+.+. +++| .++|++.++. ++ +. ....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~----------------~~-~~---------~~~~ 57 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP----------------RA-IP---------QELL 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC----------------CS-SC---------GGGE
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh----------------hc-cC---------cccc
Confidence 5899999999999999998876 3454 4678775421 11 11 0124
Q ss_pred ecCcccccCCCEEEEecCCC
Q 008509 218 VLDYSEFKDVDMVIEAVIES 237 (563)
Q Consensus 218 ~~~~~~l~~aDlVieav~e~ 237 (563)
++|++++-+.|+|++|++..
T Consensus 58 ~~d~~~ll~iDvVve~t~~~ 77 (332)
T 2ejw_A 58 RAEPFDLLEADLVVEAMGGV 77 (332)
T ss_dssp ESSCCCCTTCSEEEECCCCS
T ss_pred cCCHHHHhCCCEEEECCCCc
Confidence 56775433999999999865
No 413
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=94.16 E-value=0.058 Score=51.93 Aligned_cols=40 Identities=23% Similarity=0.151 Sum_probs=34.4
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAA 48 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 46777777 89999999999999999999999988766543
No 414
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=94.16 E-value=0.078 Score=55.49 Aligned_cols=73 Identities=14% Similarity=0.075 Sum_probs=51.3
Q ss_pred ceeEEEEcC----CcchHHHHHHHHhC--CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 147 VRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 147 ~~kv~ViGa----G~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
..||+|||+ |.||...+..+... +++| .++|+++++++...+ +.|. . .+...+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~----------~~g~-~---------~~~~~~ 79 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQ----------RLKL-S---------NATAFP 79 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHH----------HTTC-T---------TCEEES
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHH----------HcCC-C---------cceeeC
Confidence 358999999 99999999999886 7776 589999987655321 1111 0 123456
Q ss_pred Cccc-c--cCCCEEEEecCCChH
Q 008509 220 DYSE-F--KDVDMVIEAVIESVP 239 (563)
Q Consensus 220 ~~~~-l--~~aDlVieav~e~~~ 239 (563)
|+++ + .++|+|+.|+|....
T Consensus 80 ~~~~ll~~~~vD~V~i~tp~~~H 102 (438)
T 3btv_A 80 TLESFASSSTIDMIVIAIQVASH 102 (438)
T ss_dssp SHHHHHHCSSCSEEEECSCHHHH
T ss_pred CHHHHhcCCCCCEEEEeCCcHHH
Confidence 6654 3 369999999996643
No 415
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=94.13 E-value=0.061 Score=51.09 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=33.8
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++..
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 47 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAV 47 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHH
Confidence 45777776 9999999999999999999999998876654
No 416
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.13 E-value=0.21 Score=49.15 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=31.8
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
.++|.|.|+ |.+|+.++..|++.|++|++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG 37 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 368999996 99999999999999999999999844
No 417
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.09 E-value=0.052 Score=53.37 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.6
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 467999997 9999999999999999999999986
No 418
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.08 E-value=0.064 Score=53.17 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.7
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 568999997 9999999999999999999999986
No 419
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.08 E-value=0.16 Score=52.79 Aligned_cols=98 Identities=15% Similarity=0.123 Sum_probs=58.8
Q ss_pred ceeEEEEcCCc---chHHHHHHHHhCC-CeEE--EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecC
Q 008509 147 VRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 220 (563)
Q Consensus 147 ~~kv~ViGaG~---mG~~iA~~la~~G-~~V~--l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 220 (563)
..||+|||+|. ||...+..+...+ ++|+ ++|+++++++...++ .| +.. ....+|
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~----------~g-~~~---------~~~~~~ 96 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRE----------LG-LDP---------SRVYSD 96 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHH----------HT-CCG---------GGBCSC
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH----------cC-CCc---------ccccCC
Confidence 35899999999 9998888877765 6765 679999886653221 11 100 023455
Q ss_pred cc-ccc-------CCCEEEEecCCChHHHHHHHHHHHhhCCCCe-EEEecCCCCCHHH
Q 008509 221 YS-EFK-------DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 269 (563)
Q Consensus 221 ~~-~l~-------~aDlVieav~e~~~~k~~v~~~l~~~~~~~~-ii~sntS~l~i~~ 269 (563)
++ .++ +.|+|+.|+|..... ++.. ..+..+. |++-..-+.++.+
T Consensus 97 ~~~ll~~~~~~~~~vD~V~I~tp~~~H~--~~~~---~al~aGkhVl~EKPla~~~~e 149 (417)
T 3v5n_A 97 FKEMAIREAKLKNGIEAVAIVTPNHVHY--AAAK---EFLKRGIHVICDKPLTSTLAD 149 (417)
T ss_dssp HHHHHHHHHHCTTCCSEEEECSCTTSHH--HHHH---HHHTTTCEEEEESSSCSSHHH
T ss_pred HHHHHhcccccCCCCcEEEECCCcHHHH--HHHH---HHHhCCCeEEEECCCcCCHHH
Confidence 54 333 489999999987643 3322 2334443 5554443444443
No 420
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.07 E-value=0.087 Score=55.84 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=51.3
Q ss_pred ceeEEEEcC----CcchHHHHHHHHhC--CCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 147 VRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 147 ~~kv~ViGa----G~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
..||+|||+ |.||...+..+... +++| .++|+++++++...+ +.|. . .....+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~----------~~g~-~---------~~~~~~ 98 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIE----------QLQL-K---------HATGFD 98 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHH----------HTTC-T---------TCEEES
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHH----------HcCC-C---------cceeeC
Confidence 358999999 99999999999875 7776 489999987665321 1121 0 123456
Q ss_pred Cccc-c--cCCCEEEEecCCChH
Q 008509 220 DYSE-F--KDVDMVIEAVIESVP 239 (563)
Q Consensus 220 ~~~~-l--~~aDlVieav~e~~~ 239 (563)
|+++ + .++|+|+.|+|....
T Consensus 99 d~~ell~~~~vD~V~I~tp~~~H 121 (479)
T 2nvw_A 99 SLESFAQYKDIDMIVVSVKVPEH 121 (479)
T ss_dssp CHHHHHHCTTCSEEEECSCHHHH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHH
Confidence 6653 3 379999999996643
No 421
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.05 E-value=0.1 Score=52.50 Aligned_cols=148 Identities=12% Similarity=0.129 Sum_probs=75.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEEEE-eC--CHHHHHHHHHHHHHHHHHHHHcCCCC-HHH---HHhhh----cCe
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVVLK-EV--NSEYLLKGIKTIEANVRGLVTRGKLT-QDK---ANNAL----KML 215 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~l~-d~--~~~~~~~~~~~i~~~~~~~~~~g~~~-~~~---~~~~~----~~i 215 (563)
.||+|+|+|.+|.-+++.+..+ +++|+.+ |. +++.+... ++.....|.+. ..- .+..+ ..+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~l-------l~yds~~g~~~~~~v~~~~~~~l~~~g~~i 76 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYM-------FKYDTVHGQWKHSDIKIKDSKTLLLGEKPV 76 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHH-------HHCCTTTCCCCSSCEEESSSSEEEETTEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHh-------hcccccCCCCCCCcEEeecCCeeEECCeEE
Confidence 4899999999999999998876 6676654 42 44433221 11011123221 000 00000 012
Q ss_pred eee--cCcccc----cCCCEEEEecCCChHHHHHHHHHHHhhCCCCe--EEEecCCCCCHHHHhhhccCCCceeecccCC
Q 008509 216 KGV--LDYSEF----KDVDMVIEAVIESVPLKQKIFSELEKACPPHC--ILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 287 (563)
Q Consensus 216 ~~~--~~~~~l----~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~--ii~sntS~l~i~~la~~~~~~~r~ig~hf~~ 287 (563)
... .|.+.+ .++|+||||.|..... +. ...++..++ +|+|..+.- .|.-+-|+ |
T Consensus 77 ~v~~~~dp~~l~w~~~~vDvV~eaTg~~~~~--e~---a~~~l~aGak~VVIs~pa~d----------~p~~V~gv---N 138 (337)
T 3e5r_O 77 TVFGIRNPDEIPWAEAGAEYVVESTGVFTDK--EK---AAAHLKGGAKKVVISAPSKD----------APMFVCGV---N 138 (337)
T ss_dssp EEECCSCGGGCCHHHHTCSEEEECSSSCCSH--HH---HTHHHHTTCSEEEESSCCSS----------SCBCCTTT---T
T ss_pred EEEecCChHHccccccCCCEEEECCCchhhH--HH---HHHHHHcCCCEEEEecCCCC----------CCEEEecc---C
Confidence 222 255554 4899999999876543 22 233444566 888876521 12112222 2
Q ss_pred CCCCCCeEEEEeCCCCCHHHHHH-HHHHHHHhCC
Q 008509 288 PAHVMPLLEIVRTERTSAQVILD-LMTVGKIIKK 320 (563)
Q Consensus 288 P~~~~~lvEiv~~~~t~~~~~~~-~~~l~~~lGk 320 (563)
+-...+-..++.++.+....+.. +..+.+..|-
T Consensus 139 ~~~~~~~~~iIsnpsCtt~~la~~lkpL~~~~gI 172 (337)
T 3e5r_O 139 EDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGI 172 (337)
T ss_dssp GGGCCTTCCEEECCCHHHHHHHHHHHHHHHHHCE
T ss_pred HHHhCCCCcEEECCChHHHHHHHHHHHHHHhcCc
Confidence 21111112477777776655444 4444456664
No 422
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=94.04 E-value=0.05 Score=52.97 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=34.0
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~ 72 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEEL 72 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 46778876 9999999999999999999999998876654
No 423
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=94.01 E-value=0.074 Score=51.43 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=35.8
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 190 (563)
+.+.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 52 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESAL 52 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45667776 88999999999999999999999998877654433
No 424
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.01 E-value=0.2 Score=52.63 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=32.2
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
-++|.|||.|..|.+.|..|++.|++|+++|.++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 37899999999999999999999999999999653
No 425
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=94.01 E-value=0.044 Score=52.57 Aligned_cols=42 Identities=21% Similarity=0.147 Sum_probs=35.3
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 189 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 189 (563)
+++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDE 50 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 45667776 8999999999999999999999999887765443
No 426
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.00 E-value=0.21 Score=50.14 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=31.4
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
.++|.|+|+ |.+|+.++..|++.|++|++++|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 468999998 9999999999999999999999976
No 427
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.98 E-value=0.083 Score=51.91 Aligned_cols=41 Identities=17% Similarity=0.200 Sum_probs=35.3
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 188 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 188 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 68 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAE 68 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56788877 899999999999999999999999987765443
No 428
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.96 E-value=0.098 Score=55.94 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=32.8
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 182 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 182 (563)
.++|.|.|+ |.+|+.++..|+..|++|+++++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 468999996 999999999999999999999998653
No 429
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=93.95 E-value=0.041 Score=53.16 Aligned_cols=38 Identities=24% Similarity=0.228 Sum_probs=33.3
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 46 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA 46 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46778876 899999999999999999999999877654
No 430
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=93.93 E-value=0.056 Score=55.29 Aligned_cols=67 Identities=16% Similarity=0.099 Sum_probs=46.4
Q ss_pred eeEEEEcCCcchHHHHHHHHhC--CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-c
Q 008509 148 RKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~--G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 223 (563)
.||+|||+| +|.--+..+.+. +++++ ++|+++++.++..+ +-| +...+|++ .
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~----------~~g-------------v~~~~~~~~l 63 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAH----------AFG-------------IPLYTSPEQI 63 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHH----------HTT-------------CCEESSGGGC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHH----------HhC-------------CCEECCHHHH
Confidence 589999999 798777766654 67766 78999987665321 112 33456774 5
Q ss_pred ccCCCEEEEecCCCh
Q 008509 224 FKDVDMVIEAVIESV 238 (563)
Q Consensus 224 l~~aDlVieav~e~~ 238 (563)
+++.|+|+.|+|...
T Consensus 64 ~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 64 TGMPDIACIVVRSTV 78 (372)
T ss_dssp CSCCSEEEECCC--C
T ss_pred hcCCCEEEEECCCcc
Confidence 678999999998764
No 431
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=93.91 E-value=0.13 Score=51.31 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=28.5
Q ss_pred eeEEEEcCCcchHHHHHHHHh--CCCeE-EEEeCCHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHIL--NNIYV-VLKEVNSEY 182 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~--~G~~V-~l~d~~~~~ 182 (563)
.||+|||+|.||..++..+.+ .+.++ .+.|+++++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 589999999999999999865 35654 578998765
No 432
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.89 E-value=0.095 Score=52.60 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.7
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
.++|.|.|+ |.+|+.++..|++.|++|++++++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 368999997 99999999999999999999999654
No 433
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=93.87 E-value=0.068 Score=51.19 Aligned_cols=38 Identities=24% Similarity=0.173 Sum_probs=32.6
Q ss_pred eEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 149 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 149 kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~ 40 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL 40 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4566676 8999999999999999999999998876654
No 434
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.82 E-value=0.052 Score=54.97 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
..|.|||+|.+|.++|..|++.|++|+++|...
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 479999999999999999999999999999753
No 435
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.80 E-value=0.062 Score=53.68 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=36.3
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 189 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 189 (563)
++|.|.|+ |.+|..+|..|+..|++|++.+++++.++...+.
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~ 51 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALAT 51 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 46778887 8999999999999999999999999987765443
No 436
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.80 E-value=0.064 Score=51.50 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=33.9
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 43 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVA 43 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35677776 89999999999999999999999988766543
No 437
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=93.79 E-value=0.084 Score=51.42 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=34.9
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 189 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 189 (563)
+++.|.|+ |-+|..+|..|++.|++|++.+++.+.++.....
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 70 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARK 70 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45667776 7899999999999999999999999887665443
No 438
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.77 E-value=0.033 Score=56.64 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=30.6
Q ss_pred eEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 149 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 149 kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
-|.|||+|.-|...|..|+++|++|+++|+.++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 499999999999999999999999999998653
No 439
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=93.76 E-value=0.065 Score=52.19 Aligned_cols=39 Identities=18% Similarity=0.118 Sum_probs=33.4
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~ 61 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQAL 61 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 45666676 8999999999999999999999998876654
No 440
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.76 E-value=0.11 Score=50.38 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=32.6
Q ss_pred eeEEEEcC-CcchHHHHHHHHhC--CCeEEEEeCCHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILN--NIYVVLKEVNSEYLL 184 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~--G~~V~l~d~~~~~~~ 184 (563)
++|.|.|+ |.+|+.++..|++. |++|++.+++++..+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 40 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS 40 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh
Confidence 46889998 99999999999998 999999999876543
No 441
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=93.76 E-value=0.039 Score=52.08 Aligned_cols=38 Identities=18% Similarity=0.117 Sum_probs=33.1
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++.
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~ 44 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQA 44 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 45777776 999999999999999999999999877654
No 442
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.75 E-value=0.033 Score=59.13 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.6
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
|++|.|||+|.-|-+-|..|+++|++|++++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 58899999999999999999999999999998753
No 443
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=93.73 E-value=0.068 Score=52.07 Aligned_cols=40 Identities=20% Similarity=0.114 Sum_probs=34.1
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 63 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTL 63 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45677776 89999999999999999999999998766543
No 444
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.69 E-value=0.15 Score=49.99 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.5
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 468999997 9999999999999999999999974
No 445
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=93.67 E-value=0.045 Score=53.21 Aligned_cols=38 Identities=26% Similarity=0.320 Sum_probs=33.2
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++.
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~ 48 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRA 48 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46777776 899999999999999999999999887654
No 446
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=93.67 E-value=0.048 Score=52.22 Aligned_cols=39 Identities=15% Similarity=0.031 Sum_probs=33.0
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
+++.|.|+ |-+|..+|..|++.|++|++.+++++.++..
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~ 49 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAI 49 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45666676 8899999999999999999999998876654
No 447
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.66 E-value=0.05 Score=53.92 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.7
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
++|.|+|+ |.+|+.++..|++.|++|++.+|+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 58999997 99999999999999999999999874
No 448
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.65 E-value=0.1 Score=50.25 Aligned_cols=40 Identities=30% Similarity=0.402 Sum_probs=33.8
Q ss_pred eEEEE-cC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Q 008509 149 KVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 188 (563)
Q Consensus 149 kv~Vi-Ga-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 188 (563)
|++|| |+ +-+|.++|..|++.|.+|++.|++++.+++..+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~ 49 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQ 49 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence 56655 55 789999999999999999999999998777544
No 449
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.64 E-value=0.095 Score=53.52 Aligned_cols=70 Identities=23% Similarity=0.236 Sum_probs=44.8
Q ss_pred eEEEEcCCcchHHHHHHHHh--------CCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 149 KVAVIGGGLMGSGIATAHIL--------NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 149 kv~ViGaG~mG~~iA~~la~--------~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
||||||+|.||..-+..+.. .+.+| .++|++++++++..++ -| .-...+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------~g------------~~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE----------FG------------FEKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH----------HT------------CSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH----------hC------------CCeecC
Confidence 79999999999866554432 24564 4789999887654221 01 123456
Q ss_pred Cccc-c--cCCCEEEEecCCChHH
Q 008509 220 DYSE-F--KDVDMVIEAVIESVPL 240 (563)
Q Consensus 220 ~~~~-l--~~aDlVieav~e~~~~ 240 (563)
|+++ + .+.|+|+.|+|...-.
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 7754 3 4689999999987654
No 450
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=93.64 E-value=0.04 Score=55.36 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.3
Q ss_pred ceeEEEEcCCcchHHHHHHHHh---CCCeEEEEeCCH
Q 008509 147 VRKVAVIGGGLMGSGIATAHIL---NNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~---~G~~V~l~d~~~ 180 (563)
|.+|+|||+|..|...|..|++ .|++|+++|.+.
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 3689999999999999999999 999999999864
No 451
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.63 E-value=0.041 Score=54.83 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=31.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
.+|.|||+|..|..+|..|++.|++|+++|+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999874
No 452
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.63 E-value=0.36 Score=46.98 Aligned_cols=39 Identities=26% Similarity=0.326 Sum_probs=33.3
Q ss_pred eEEEE-cC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 149 KVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 149 kv~Vi-Ga-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
||+|| |+ +-+|.++|..|++.|.+|++.|++++.+++..
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~ 70 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI 70 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 56666 55 77999999999999999999999999877643
No 453
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.60 E-value=0.053 Score=48.83 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=31.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
.+|.|||+|..|..+|..|++.|.+|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999875
No 454
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.60 E-value=0.068 Score=52.27 Aligned_cols=40 Identities=28% Similarity=0.238 Sum_probs=34.9
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 69 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV 69 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 46778887 89999999999999999999999998776543
No 455
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=93.60 E-value=0.065 Score=51.87 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=35.5
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 190 (563)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 64 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL 64 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45666676 89999999999999999999999998877654433
No 456
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.59 E-value=0.053 Score=51.79 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=33.3
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
+++.|.|+ |.+|..+|..|++.|++|++.+++++.++.
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~ 44 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLRE 44 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46778877 899999999999999999999999877654
No 457
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=93.59 E-value=0.14 Score=51.41 Aligned_cols=37 Identities=16% Similarity=0.003 Sum_probs=33.8
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 184 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~ 184 (563)
-++|.|+|.|..|..++..|...|+ |+++|.|++.++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK 151 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence 3579999999999999999999999 999999998866
No 458
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.55 E-value=0.055 Score=53.41 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=33.6
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~ 67 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK 67 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 34666666 89999999999999999999999998776543
No 459
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.48 E-value=0.19 Score=49.38 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.4
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999997 9999999999999999999999983
No 460
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=93.45 E-value=0.085 Score=51.87 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=34.2
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~ 75 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGM 75 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45777776 89999999999999999999999988766543
No 461
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=93.44 E-value=0.16 Score=51.13 Aligned_cols=102 Identities=17% Similarity=0.149 Sum_probs=56.5
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHhhhc--CeeeecCc
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGK--LTQDKANNALK--MLKGVLDY 221 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~--~~~~~~~~~~~--~i~~~~~~ 221 (563)
.||+|+|+|.||..++..+.++ +++|+ +.|++++....... ..|. .+.......+. .+....+.
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~----------~~g~~~~~~~~~~~~~~~~~v~v~~~~ 71 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH----------RRGIRIYVPQQSIKKFEESGIPVAGTV 71 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH----------HTTCCEECCGGGHHHHHTTTCCCCCCH
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHH----------hcCcceecCcCHHHHhcccccccccCH
Confidence 4899999999999999998876 55654 66777554433211 1111 11101111111 12223344
Q ss_pred cc-ccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCC
Q 008509 222 SE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 264 (563)
Q Consensus 222 ~~-l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~ 264 (563)
+. +.++|+||+|.|..... +... .++..++.++++++.
T Consensus 72 e~l~~~vDvV~~aTp~~~s~--~~a~---~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 72 EDLIKTSDIVVDTTPNGVGA--QYKP---IYLQLQRNAIFQGGE 110 (340)
T ss_dssp HHHHHHCSEEEECCSTTHHH--HHHH---HHHHTTCEEEECTTS
T ss_pred hHhhcCCCEEEECCCCchhH--HHHH---HHHHcCCeEEEeCCC
Confidence 33 36899999999976532 2222 233446656666554
No 462
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=93.43 E-value=0.15 Score=51.19 Aligned_cols=151 Identities=13% Similarity=0.116 Sum_probs=74.6
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEEEE-eC--CHHHHHHHHHHHHHHHHHHHHcCCCCHHH---HHhhh---cCeee
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVVLK-EV--NSEYLLKGIKTIEANVRGLVTRGKLTQDK---ANNAL---KMLKG 217 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~l~-d~--~~~~~~~~~~~i~~~~~~~~~~g~~~~~~---~~~~~---~~i~~ 217 (563)
.||+|+|+|.+|..+++.+..+ +++|+.+ |+ +++.+....+ ...-.|.+.... -.... ..+..
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~-------~ds~~g~~~~~~~~~~~~l~v~g~~i~v 76 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQ-------YDSTHGKFHGTVKAENGKLVINGNPITI 76 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHH-------CCTTTCSCSSCEEEETTEEEETTEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhh-------cccccCCCCCceEEcCCeEEECCeEEEE
Confidence 5899999999999999988764 6787644 53 5554333211 000112221000 00000 01221
Q ss_pred e--cCcccc----cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCCHHHHhhhccCCCceeecccCCCCCC
Q 008509 218 V--LDYSEF----KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHV 291 (563)
Q Consensus 218 ~--~~~~~l----~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~i~~la~~~~~~~r~ig~hf~~P~~~ 291 (563)
. .|.+.+ .++|+||+|.|..... + ....++..++..+.+++. .. ..|.-+-|+ |+-..
T Consensus 77 ~~~~d~~~l~~~~~~vDvV~eatg~~~~~--e---~a~~~l~aGak~V~iSap-~~-------~~p~~V~gv---N~~~~ 140 (335)
T 1u8f_O 77 FQERDPSKIKWGDAGAEYVVESTGVFTTM--E---KAGAHLQGGAKRVIISAP-SA-------DAPMFVMGV---NHEKY 140 (335)
T ss_dssp ECCSSGGGCCTTTTTCCEEEECSSSCCSH--H---HHGGGGGGTCSEEEESSC-CS-------SSCBCCTTT---TGGGC
T ss_pred EecCCHHHCccccCCCCEEEECCCchhhH--H---HHHHHHhCCCeEEEeccC-CC-------CCCeEEecc---CHHHh
Confidence 2 245544 5899999999876543 2 234556666544443332 10 012112232 22211
Q ss_pred CCeEEEEeCCCCCHHHHHH-HHHHHHHhCCc
Q 008509 292 MPLLEIVRTERTSAQVILD-LMTVGKIIKKV 321 (563)
Q Consensus 292 ~~lvEiv~~~~t~~~~~~~-~~~l~~~lGk~ 321 (563)
.+-..++.++.+....+.. +..+.+..|-.
T Consensus 141 ~~~~~iIsnpsCtt~~l~~~lkpL~~~~gI~ 171 (335)
T 1u8f_O 141 DNSLKIISNASCTTNCLAPLAKVIHDNFGIV 171 (335)
T ss_dssp CTTCSEEECCCHHHHHHHHHHHHHHHHHCEE
T ss_pred CCCCCEEECCChHHHHHHHHHHHHHHhCCcc
Confidence 1112377777766655444 44455666643
No 463
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=93.42 E-value=0.057 Score=51.69 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=34.0
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
+++.|.|+ |-+|..+|..|++.|++|++.+++++.++..
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~ 46 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAA 46 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45777777 8899999999999999999999999877654
No 464
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.39 E-value=0.05 Score=53.03 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=33.1
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~ 182 (563)
+++|.|.|+|.+|+.++..|++.|++|++++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 468999999999999999999999999999998654
No 465
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=93.38 E-value=0.44 Score=45.61 Aligned_cols=37 Identities=19% Similarity=0.227 Sum_probs=30.8
Q ss_pred eEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHH
Q 008509 149 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 185 (563)
Q Consensus 149 kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 185 (563)
+|.|-|+ +-+|.+||..|++.|.+|++.|++++.++.
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~ 41 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD 41 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3444465 889999999999999999999999887654
No 466
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.38 E-value=0.19 Score=52.34 Aligned_cols=64 Identities=20% Similarity=0.147 Sum_probs=43.8
Q ss_pred eeEEEEcCCcchHHHHHHHHh----------CCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCee
Q 008509 148 RKVAVIGGGLMGSGIATAHIL----------NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK 216 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~----------~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~ 216 (563)
-+|+|||+|+||++++..+.. .+++| .++|++++..+.. .. ...
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-----------~~--------------~~~ 65 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-----------AG--------------GLP 65 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-----------HT--------------TCC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-----------cc--------------cCc
Confidence 489999999999999887753 34454 4778888754321 00 123
Q ss_pred eecCccc-c--cCCCEEEEecCC
Q 008509 217 GVLDYSE-F--KDVDMVIEAVIE 236 (563)
Q Consensus 217 ~~~~~~~-l--~~aDlVieav~e 236 (563)
.++|+++ + .+.|+|++|+|.
T Consensus 66 ~~~d~~ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 66 LTTNPFDVVDDPEIDIVVELIGG 88 (444)
T ss_dssp EESCTHHHHTCTTCCEEEECCCS
T ss_pred ccCCHHHHhcCCCCCEEEEcCCC
Confidence 4567643 3 368999999985
No 467
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.37 E-value=0.053 Score=52.92 Aligned_cols=39 Identities=21% Similarity=0.216 Sum_probs=33.2
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 46 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEET 46 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45666666 8999999999999999999999999876654
No 468
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.37 E-value=0.15 Score=51.25 Aligned_cols=86 Identities=15% Similarity=0.210 Sum_probs=49.0
Q ss_pred eeEEEEcCCcchHHHHHHHHhC-CCeEE-EEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhh-hcCeeeecCcc-c
Q 008509 148 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA-LKMLKGVLDYS-E 223 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~-~~~i~~~~~~~-~ 223 (563)
.||+|+|+|.||..++..+... +.+|+ +.|++++.+....+.. ...-.+.+.. ..... -..+....+++ .
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~-----g~~~~~~~~~-~v~~~~~~~~~v~~d~~~l 76 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-----GIPVYAASEE-FIPRFEKEGFEVAGTLNDL 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-----TCCEEESSGG-GHHHHHHHTCCCSCBHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhc-----Cccccccccc-cceeccCCceEEcCcHHHh
Confidence 5899999999999999998876 55654 6688766554322100 0000000100 00000 01123334553 3
Q ss_pred ccCCCEEEEecCCChH
Q 008509 224 FKDVDMVIEAVIESVP 239 (563)
Q Consensus 224 l~~aDlVieav~e~~~ 239 (563)
+.++|+|++|.|....
T Consensus 77 ~~~vDvV~~aTp~~~h 92 (334)
T 2czc_A 77 LEKVDIIVDATPGGIG 92 (334)
T ss_dssp HTTCSEEEECCSTTHH
T ss_pred ccCCCEEEECCCcccc
Confidence 4689999999997753
No 469
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=93.36 E-value=0.062 Score=50.93 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=33.2
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEE-eCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLK-EVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~-d~~~~~~~~~ 186 (563)
++|.|.|+ |.+|..++..|++.|++|++. +++++.++..
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~ 42 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEV 42 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 46778877 899999999999999999998 8998776553
No 470
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=93.30 E-value=0.1 Score=50.32 Aligned_cols=42 Identities=21% Similarity=0.372 Sum_probs=35.1
Q ss_pred eEEEE-c-CCcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Q 008509 149 KVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 190 (563)
Q Consensus 149 kv~Vi-G-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 190 (563)
|++|| | ++-+|.+||..|++.|.+|++.|++++.+++..+.+
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l 53 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL 53 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 66766 4 488999999999999999999999999887755433
No 471
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=93.29 E-value=0.073 Score=51.74 Aligned_cols=40 Identities=15% Similarity=-0.032 Sum_probs=33.3
Q ss_pred eEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Q 008509 149 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 188 (563)
Q Consensus 149 kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 188 (563)
.|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~ 70 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGA 70 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4555566 899999999999999999999999988766543
No 472
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.26 E-value=0.067 Score=51.42 Aligned_cols=35 Identities=31% Similarity=0.377 Sum_probs=31.5
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 182 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 182 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 42 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG 42 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH
Confidence 46778877 899999999999999999999999876
No 473
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=93.26 E-value=0.083 Score=52.75 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=48.4
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
+.||+|||+ |.||...+..+...|.+| .++|++++.. .. .+ ........++++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~-----------~~-----------~~~~~~~~~~~~~l 59 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-II-----------DS-----------ISPQSEFFTEFEFF 59 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GG-----------GG-----------TCTTCEEESSHHHH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HH-----------Hh-----------hCCCCcEECCHHHH
Confidence 578999999 789999999999888864 4788887641 10 00 11123445565432
Q ss_pred ------------cCCCEEEEecCCChH
Q 008509 225 ------------KDVDMVIEAVIESVP 239 (563)
Q Consensus 225 ------------~~aDlVieav~e~~~ 239 (563)
.+.|+|+.|+|....
T Consensus 60 l~~~~~l~~~~~~~vD~V~I~tP~~~H 86 (318)
T 3oa2_A 60 LDHASNLKRDSATALDYVSICSPNYLH 86 (318)
T ss_dssp HHHHHHHTTSTTTSCCEEEECSCGGGH
T ss_pred HHhhhhhhhccCCCCcEEEECCCcHHH
Confidence 578999999997654
No 474
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.23 E-value=0.084 Score=52.55 Aligned_cols=70 Identities=11% Similarity=-0.015 Sum_probs=48.6
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
+.||+|||+ |.||...+..+...+.+| .++|++++.. .. .+ ........++++++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~-----------~~-----------~~~~~~~~~~~~~l 59 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LV-----------DS-----------FFPEAEFFTEPEAF 59 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GG-----------GG-----------TCTTCEEESCHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HH-----------Hh-----------hCCCCceeCCHHHH
Confidence 578999999 789999999999888865 4789887641 10 01 11123445555422
Q ss_pred -----------cCCCEEEEecCCChH
Q 008509 225 -----------KDVDMVIEAVIESVP 239 (563)
Q Consensus 225 -----------~~aDlVieav~e~~~ 239 (563)
.+.|+|+.|+|....
T Consensus 60 l~~~~~l~~~~~~vD~V~I~tP~~~H 85 (312)
T 3o9z_A 60 EAYLEDLRDRGEGVDYLSIASPNHLH 85 (312)
T ss_dssp HHHHHHHHHTTCCCSEEEECSCGGGH
T ss_pred HHHhhhhcccCCCCcEEEECCCchhh
Confidence 578999999997754
No 475
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=93.23 E-value=0.085 Score=53.85 Aligned_cols=70 Identities=19% Similarity=0.152 Sum_probs=47.9
Q ss_pred eEEEEcCCcchHHHHHHHHhC--------CCe-EEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeec
Q 008509 149 KVAVIGGGLMGSGIATAHILN--------NIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 219 (563)
Q Consensus 149 kv~ViGaG~mG~~iA~~la~~--------G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 219 (563)
||||||+|.||..-+..+... +.+ |.++|+++++++...++ -| .....+
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~----------~g------------~~~~~~ 65 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGK----------LG------------WSTTET 65 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHH----------HT------------CSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHH----------cC------------CCcccC
Confidence 799999999999877766543 124 45889999887654221 11 123456
Q ss_pred Cccc-c--cCCCEEEEecCCChHH
Q 008509 220 DYSE-F--KDVDMVIEAVIESVPL 240 (563)
Q Consensus 220 ~~~~-l--~~aDlVieav~e~~~~ 240 (563)
|+++ + .+.|+|+.|+|.....
T Consensus 66 d~~~ll~~~~iDaV~I~tP~~~H~ 89 (390)
T 4h3v_A 66 DWRTLLERDDVQLVDVCTPGDSHA 89 (390)
T ss_dssp CHHHHTTCTTCSEEEECSCGGGHH
T ss_pred CHHHHhcCCCCCEEEEeCChHHHH
Confidence 7753 3 4689999999987654
No 476
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=93.22 E-value=0.13 Score=51.92 Aligned_cols=98 Identities=13% Similarity=0.122 Sum_probs=55.8
Q ss_pred ceeEEEEc-CCcchHHHHHHHHhCC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcccc
Q 008509 147 VRKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 224 (563)
Q Consensus 147 ~~kv~ViG-aG~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 224 (563)
+.||+|+| .|.+|..+...|..+. ++|+.+....+.-.+ ++.. .+.+.. ...+.. .+.+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~--------~~~~--~~~~~g------~~~~~~-~~~~~~ 66 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEP--------VHFV--HPNLRG------RTNLKF-VPPEKL 66 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSB--------GGGT--CGGGTT------TCCCBC-BCGGGC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCch--------hHHh--CchhcC------cccccc-cchhHh
Confidence 46899999 5999999999998765 477765543221000 0000 000000 001111 122235
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCCC
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 266 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l~ 266 (563)
.++|+||+|+|.... +++.. .++..++.++++++...
T Consensus 67 ~~vDvV~~a~g~~~s--~~~a~---~~~~aG~~VId~Sa~~r 103 (345)
T 2ozp_A 67 EPADILVLALPHGVF--AREFD---RYSALAPVLVDLSADFR 103 (345)
T ss_dssp CCCSEEEECCCTTHH--HHTHH---HHHTTCSEEEECSSTTS
T ss_pred cCCCEEEEcCCcHHH--HHHHH---HHHHCCCEEEEcCcccc
Confidence 789999999997743 23333 33456777888877543
No 477
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=93.18 E-value=0.12 Score=51.66 Aligned_cols=39 Identities=23% Similarity=0.302 Sum_probs=33.7
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
++|.|.|+ |.+|..++..|++.|++|++.+++.+..+..
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~ 45 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREA 45 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHH
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHH
Confidence 57999986 9999999999999999999999987654443
No 478
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.14 E-value=0.06 Score=55.49 Aligned_cols=34 Identities=32% Similarity=0.286 Sum_probs=31.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 5799999999999999999999999999999764
No 479
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=93.13 E-value=0.089 Score=50.60 Aligned_cols=40 Identities=28% Similarity=0.271 Sum_probs=33.0
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHH-HHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY-LLKGI 187 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~-~~~~~ 187 (563)
++|.|.|+ |.+|..+|..|++.|++|++.+++++. ++...
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 46 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVR 46 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHH
Confidence 45666676 899999999999999999999999876 55543
No 480
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=93.13 E-value=0.31 Score=46.68 Aligned_cols=76 Identities=16% Similarity=0.015 Sum_probs=50.7
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeE-EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc-cc
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 224 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 224 (563)
-++|+++|.|.||..++.. . ++++ .+|+ ++ .+.+ .+..++|++ .+
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k-----------------~gel----------gv~a~~d~d~ll 58 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RI-----------------SKDI----------PGVVRLDEFQVP 58 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SS-----------------CCCC----------SSSEECSSCCCC
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cc-----------------cccc----------CceeeCCHHHHh
Confidence 3689999999999999998 4 8886 4666 21 1111 234567775 44
Q ss_pred cCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEe
Q 008509 225 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 260 (563)
Q Consensus 225 ~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~s 260 (563)
.++|+||||.... .+-..+.+.+..+.=+++
T Consensus 59 a~pD~VVe~A~~~-----av~e~~~~iL~aG~dvv~ 89 (253)
T 1j5p_A 59 SDVSTVVECASPE-----AVKEYSLQILKNPVNYII 89 (253)
T ss_dssp TTCCEEEECSCHH-----HHHHHHHHHTTSSSEEEE
T ss_pred hCCCEEEECCCHH-----HHHHHHHHHHHCCCCEEE
Confidence 7999999998522 233336777777664443
No 481
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=93.08 E-value=0.15 Score=51.78 Aligned_cols=31 Identities=10% Similarity=0.210 Sum_probs=29.0
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCC-eEEEEeC
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNI-YVVLKEV 178 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~-~V~l~d~ 178 (563)
+||.|.|+ |.+|+.++..|++.|+ +|+..|+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~ 33 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR 33 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence 47999996 9999999999999999 9999999
No 482
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.06 E-value=0.51 Score=48.56 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=34.9
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 186 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~ 186 (563)
.+|.|+|+|.+|...++.+...|. +|+..|.++++++.+
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~ 254 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLA 254 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 579999999999999988888999 899999999887764
No 483
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=93.03 E-value=0.17 Score=49.13 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=32.2
Q ss_pred eeEEEEcC-CcchHHHHHHHHhC-CCeEEEEeCCHHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNSEYL 183 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~-G~~V~l~d~~~~~~ 183 (563)
++|.|.|+ |.+|+.++..|++. |++|++.+|+++..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~ 38 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV 38 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH
Confidence 36999997 99999999999988 99999999998753
No 484
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.03 E-value=0.13 Score=43.64 Aligned_cols=81 Identities=9% Similarity=-0.010 Sum_probs=54.6
Q ss_pred ceeEEEEcC----CcchHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHhhhcCeeeecCcc
Q 008509 147 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 222 (563)
Q Consensus 147 ~~kv~ViGa----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 222 (563)
.++|+|||+ +..|..+...|.+.||+|+.++...+.+ .-.....+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl~ 54 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINERP 54 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCChH
Confidence 478999998 5689999999999999999888753321 1133445566
Q ss_pred cccCCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEE
Q 008509 223 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 259 (563)
Q Consensus 223 ~l~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~ 259 (563)
++.+.|+++.++|.+ .--++++++.+.- ...++.
T Consensus 55 dlp~vDlavi~~p~~--~v~~~v~e~~~~g-~k~v~~ 88 (122)
T 3ff4_A 55 VIEGVDTVTLYINPQ--NQLSEYNYILSLK-PKRVIF 88 (122)
T ss_dssp CCTTCCEEEECSCHH--HHGGGHHHHHHHC-CSEEEE
T ss_pred HCCCCCEEEEEeCHH--HHHHHHHHHHhcC-CCEEEE
Confidence 665599999999854 3335566655432 234443
No 485
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.02 E-value=0.053 Score=56.56 Aligned_cols=33 Identities=12% Similarity=0.284 Sum_probs=31.3
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
++|.|||+|..|...|..|+++|++|+++|..+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 689999999999999999999999999999875
No 486
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.01 E-value=0.23 Score=50.12 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 182 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~ 182 (563)
++|+|+|.|.+|..+|..+...|.+|+++|++++.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 68999999999999999999999999999999764
No 487
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.96 E-value=0.18 Score=47.52 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=31.7
Q ss_pred eeEEEEcC-CcchHHHHHHHHhCCC--eEEEEeCCHHH
Q 008509 148 RKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEY 182 (563)
Q Consensus 148 ~kv~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~ 182 (563)
++|.|.|+ |.+|..++..|++.|+ +|++.+++++.
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~ 56 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLT 56 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCC
Confidence 57999996 9999999999999999 99999998764
No 488
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.95 E-value=0.068 Score=54.43 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=30.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
..|.|||+|..|.+.|..|+++|++|+++|.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999863
No 489
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=92.95 E-value=0.2 Score=50.25 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=31.8
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
+++|.|.|+ |.+|+.++..|++.|++|+++++++.
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 62 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT 62 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 468999998 99999999999999999999999753
No 490
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.91 E-value=0.07 Score=53.65 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=31.1
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
..|.|||+|..|.+.|..|++.|++|+++|.++
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999874
No 491
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=92.90 E-value=0.13 Score=52.16 Aligned_cols=99 Identities=18% Similarity=0.129 Sum_probs=55.7
Q ss_pred eeEEEEc-CCcchHHHHHHHHhCC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCC-----CHHHHHhhhcCeee-ec
Q 008509 148 RKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-----TQDKANNALKMLKG-VL 219 (563)
Q Consensus 148 ~kv~ViG-aG~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~-----~~~~~~~~~~~i~~-~~ 219 (563)
.||+|+| .|.+|..++..|..+. ++|+.+..+.....+. + +.. .+.+ .... ..+.. ..
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~---~----~~~--~~~~~~~~~~~~~-----~~~~~~~~ 74 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKK---Y----KDA--CYWFQDRDIPENI-----KDMVVIPT 74 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSB---H----HHH--SCCCCSSCCCHHH-----HTCBCEES
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccccccccc---H----HHh--cccccccccccCc-----eeeEEEeC
Confidence 6899999 6999999999988764 6887664332211100 0 000 1111 0100 01111 12
Q ss_pred Ccccc-c-CCCEEEEecCCChHHHHHHHHHHHhhCCCCeEEEecCCCC
Q 008509 220 DYSEF-K-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 265 (563)
Q Consensus 220 ~~~~l-~-~aDlVieav~e~~~~k~~v~~~l~~~~~~~~ii~sntS~l 265 (563)
+.+.+ + ++|+||+|+|... ..++...+ +..++.++++++..
T Consensus 75 ~~~~~~~~~~DvV~~atp~~~--~~~~a~~~---~~aG~~VId~s~~~ 117 (354)
T 1ys4_A 75 DPKHEEFEDVDIVFSALPSDL--AKKFEPEF---AKEGKLIFSNASAY 117 (354)
T ss_dssp CTTSGGGTTCCEEEECCCHHH--HHHHHHHH---HHTTCEEEECCSTT
T ss_pred CHHHHhcCCCCEEEECCCchH--HHHHHHHH---HHCCCEEEECCchh
Confidence 44444 6 8999999998543 23333333 34577788887754
No 492
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.89 E-value=0.058 Score=54.59 Aligned_cols=33 Identities=15% Similarity=0.328 Sum_probs=30.7
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
..|.|||+|..|.+.|..|+++|++|+++|...
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 469999999999999999999999999999864
No 493
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.89 E-value=0.54 Score=49.37 Aligned_cols=41 Identities=27% Similarity=0.357 Sum_probs=35.7
Q ss_pred ccceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 145 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 145 ~~~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
.++++|.|+|+|.+|..+|..|- .+++|.+++.|+++++..
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~-~~~~v~iIE~d~~r~~~l 273 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLE-QTYSVKLIERNLQRAEKL 273 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHT-TTSEEEEEESCHHHHHHH
T ss_pred ccccEEEEEcchHHHHHHHHHhh-hcCceEEEecCHHHHHHH
Confidence 35689999999999999999874 569999999999987764
No 494
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=92.85 E-value=0.096 Score=53.63 Aligned_cols=71 Identities=17% Similarity=0.122 Sum_probs=47.2
Q ss_pred ceeEEEEc-CCcchHH-HH----HHHHhCC-CeE----------EEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Q 008509 147 VRKVAVIG-GGLMGSG-IA----TAHILNN-IYV----------VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN 209 (563)
Q Consensus 147 ~~kv~ViG-aG~mG~~-iA----~~la~~G-~~V----------~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~ 209 (563)
..||+||| +|.||.. .+ ..+...+ ..+ .++|+++++.+...+ +-|
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~----------~~~-------- 67 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAK----------RFN-------- 67 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHH----------HTT--------
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHH----------HhC--------
Confidence 35899999 9999998 66 6665543 333 499999988765321 111
Q ss_pred hhhcCeeeecCccc-c--cCCCEEEEecCCChH
Q 008509 210 NALKMLKGVLDYSE-F--KDVDMVIEAVIESVP 239 (563)
Q Consensus 210 ~~~~~i~~~~~~~~-l--~~aDlVieav~e~~~ 239 (563)
.....+|+++ + .+.|+|+.|+|....
T Consensus 68 ----~~~~~~~~~~ll~~~~iD~V~i~tp~~~h 96 (383)
T 3oqb_A 68 ----IARWTTDLDAALADKNDTMFFDAATTQAR 96 (383)
T ss_dssp ----CCCEESCHHHHHHCSSCCEEEECSCSSSS
T ss_pred ----CCcccCCHHHHhcCCCCCEEEECCCchHH
Confidence 1124566643 3 458999999997654
No 495
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=92.85 E-value=0.29 Score=49.34 Aligned_cols=151 Identities=13% Similarity=0.130 Sum_probs=77.3
Q ss_pred cceeEEEEcCCcchHHHHHHHHhC-CCeEEEEeC---CHHHHHHHHHHHHHHHHHHHHcCCCCHHH--HHhhh----cCe
Q 008509 146 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEV---NSEYLLKGIKTIEANVRGLVTRGKLTQDK--ANNAL----KML 215 (563)
Q Consensus 146 ~~~kv~ViGaG~mG~~iA~~la~~-G~~V~l~d~---~~~~~~~~~~~i~~~~~~~~~~g~~~~~~--~~~~~----~~i 215 (563)
.+.||+|+|+|.+|.-+.+.+..+ .++|+.+.- +.+.+.. .++...-.|.+...- .+..+ ..+
T Consensus 16 ~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~-------ll~~ds~hg~~~~~v~~~~~~l~v~g~~i 88 (354)
T 3cps_A 16 FQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAY-------LLKYDSVHGNFNGTVEVSGKDLCINGKVV 88 (354)
T ss_dssp --CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHH-------HHHCCTTTCSCSSCEEECC-CEEETTEEE
T ss_pred cceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhh-------hhcccccCCCCCCcEEEeCCEEEECCeEE
Confidence 356899999999999999999877 678776542 2322211 111111123222100 00000 012
Q ss_pred eeec--Ccccc----cCCCEEEEecCCChHHHHHHHHHHHhhCCCCe--EEEecCCCCCHHHHhhhccCCCceeecccCC
Q 008509 216 KGVL--DYSEF----KDVDMVIEAVIESVPLKQKIFSELEKACPPHC--ILATNTSTIDLNIVGEKTSSQDRIIGAHFFS 287 (563)
Q Consensus 216 ~~~~--~~~~l----~~aDlVieav~e~~~~k~~v~~~l~~~~~~~~--ii~sntS~l~i~~la~~~~~~~r~ig~hf~~ 287 (563)
.... |.+.+ .++|+||||.|-.... +....++..++ +|+|+.|.- .-|.-+.|+ |
T Consensus 89 ~v~~~~dp~~i~w~~~~vDvV~eatg~~~s~-----e~a~~~l~~GakkvVId~padd---------~~p~~V~GV---N 151 (354)
T 3cps_A 89 KVFQAKDPAEIPWGASGAQIVCESTGVFTTE-----EKASLHLKGGAKKVIISAPPKD---------NVPMYVMGV---N 151 (354)
T ss_dssp EEECCSCGGGCCHHHHTCCEEEECSSSCCSH-----HHHGGGGTTTCSEEEESSCCSS---------CCCBCCTTT---T
T ss_pred EEEecCChHHCCcccCCCCEEEECCCchhhH-----HHHHHHHHcCCcEEEEeCCCCC---------CCCEEEecc---C
Confidence 2221 34444 5899999999866432 23455677777 888876631 012112222 2
Q ss_pred CCCCCCe-EEEEeCCCCCHHHHHH-HHHHHHHhCC
Q 008509 288 PAHVMPL-LEIVRTERTSAQVILD-LMTVGKIIKK 320 (563)
Q Consensus 288 P~~~~~l-vEiv~~~~t~~~~~~~-~~~l~~~lGk 320 (563)
+-...+- ..++.++.+....+.. +..+.+..|-
T Consensus 152 ~~~~~~~~~~IISNpsCtTn~lap~lkpL~~~~gI 186 (354)
T 3cps_A 152 NTEYDPSKFNVISNASCTTNCLAPLAKIINDKFGI 186 (354)
T ss_dssp GGGCCTTTCSEEECCCHHHHHHHHHHHHHHHHTCE
T ss_pred HHHhCcCCCcEEECCCcHHHHHHHHHHHHHHhCCe
Confidence 2111111 2377777776655544 4444456664
No 496
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=92.80 E-value=0.23 Score=47.95 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=31.5
Q ss_pred eEEEEcC-CcchHHHHHHHHhC--CCeEEEEeCCHHHH
Q 008509 149 KVAVIGG-GLMGSGIATAHILN--NIYVVLKEVNSEYL 183 (563)
Q Consensus 149 kv~ViGa-G~mG~~iA~~la~~--G~~V~l~d~~~~~~ 183 (563)
+|.|.|+ |.+|+.++..|++. |++|++.+++++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~ 38 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA 38 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh
Confidence 4789998 99999999999998 99999999987654
No 497
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.80 E-value=0.068 Score=55.31 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=30.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
++|.|||+|..|.+.|..|+++|++|+++|.++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999864
No 498
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.79 E-value=0.076 Score=54.55 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.8
Q ss_pred eeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCHH
Q 008509 148 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 181 (563)
Q Consensus 148 ~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~ 181 (563)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 5799999999999999999999999999998754
No 499
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=92.77 E-value=0.13 Score=48.29 Aligned_cols=40 Identities=13% Similarity=0.084 Sum_probs=34.0
Q ss_pred ceeEEEEcC-CcchHHHHHHHHhCCCeEEEEeCCHHHHHHH
Q 008509 147 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 186 (563)
Q Consensus 147 ~~kv~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 186 (563)
|++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 41 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV 41 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 356788887 8999999999999999999999999887654
No 500
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=92.77 E-value=0.085 Score=53.56 Aligned_cols=34 Identities=35% Similarity=0.427 Sum_probs=31.5
Q ss_pred ceeEEEEcCCcchHHHHHHHHhCCCeEEEEeCCH
Q 008509 147 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 180 (563)
Q Consensus 147 ~~kv~ViGaG~mG~~iA~~la~~G~~V~l~d~~~ 180 (563)
...|.|||+|..|.+.|..|++.|++|+++|.+.
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4689999999999999999999999999999863
Done!